Query 004348
Match_columns 759
No_of_seqs 419 out of 3077
Neff 8.6
Searched_HMMs 46136
Date Thu Mar 28 21:53:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004348.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004348hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02654 acetate-CoA ligase 100.0 1.2E-95 3E-100 861.2 71.4 636 124-759 11-666 (666)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 1.7E-91 3.7E-96 776.2 56.1 502 192-733 1-522 (528)
3 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 8.5E-90 1.8E-94 808.9 68.9 599 142-755 4-624 (625)
4 PRK00174 acetyl-CoA synthetase 100.0 3.4E-88 7.5E-93 796.7 70.2 608 132-757 7-633 (637)
5 KOG1175 Acyl-CoA synthetase [L 100.0 3.5E-88 7.6E-93 749.5 55.1 595 141-757 9-624 (626)
6 TIGR02316 propion_prpE propion 100.0 5.5E-87 1.2E-91 784.5 67.4 596 144-758 2-627 (628)
7 PTZ00237 acetyl-CoA synthetase 100.0 4.4E-86 9.6E-91 777.2 66.6 598 141-757 6-645 (647)
8 PRK10524 prpE propionyl-CoA sy 100.0 4.3E-85 9.4E-90 769.5 66.2 597 142-757 1-627 (629)
9 TIGR01217 ac_ac_CoA_syn acetoa 100.0 7.3E-84 1.6E-88 759.6 66.0 591 142-757 34-648 (652)
10 PRK03584 acetoacetyl-CoA synth 100.0 3.7E-83 8E-88 756.1 67.4 593 142-757 33-650 (655)
11 PLN03052 acetate--CoA ligase; 100.0 1.1E-78 2.4E-83 719.4 62.0 563 142-734 119-722 (728)
12 PRK12467 peptide synthase; Pro 100.0 2E-74 4.2E-79 782.5 46.6 556 102-733 3011-3594(3956)
13 PRK12467 peptide synthase; Pro 100.0 3.6E-74 7.8E-79 780.0 45.6 566 101-734 1488-2086(3956)
14 TIGR03443 alpha_am_amid L-amin 100.0 4.3E-73 9.3E-78 723.0 52.0 590 102-731 152-826 (1389)
15 KOG1176 Acyl-CoA synthetase [L 100.0 6E-72 1.3E-76 623.5 51.2 481 214-734 29-533 (537)
16 PRK05691 peptide synthase; Val 100.0 4E-73 8.6E-78 776.5 48.3 563 103-731 3637-4226(4334)
17 PRK10252 entF enterobactin syn 100.0 1.8E-72 3.8E-77 714.4 48.6 553 106-730 378-964 (1296)
18 PRK04319 acetyl-CoA synthetase 100.0 9.1E-71 2E-75 640.6 57.3 517 192-746 35-570 (570)
19 PRK12316 peptide synthase; Pro 100.0 3.5E-72 7.6E-77 772.3 48.7 558 101-733 425-1006(5163)
20 PRK12316 peptide synthase; Pro 100.0 7.7E-72 1.7E-76 768.9 47.3 549 101-732 2971-3543(5163)
21 KOG1177 Long chain fatty acid 100.0 9E-71 2E-75 571.4 41.1 504 201-735 51-589 (596)
22 PRK05691 peptide synthase; Val 100.0 1.5E-70 3.4E-75 751.0 50.4 556 102-731 1047-1626(4334)
23 COG0318 CaiC Acyl-CoA syntheta 100.0 1E-67 2.2E-72 608.0 53.1 491 201-733 12-527 (534)
24 PRK07788 acyl-CoA synthetase; 100.0 4.8E-68 1E-72 615.2 50.0 480 201-730 50-548 (549)
25 PRK06060 acyl-CoA synthetase; 100.0 2.8E-67 6.1E-72 625.6 51.1 464 202-731 6-490 (705)
26 PRK07529 AMP-binding domain pr 100.0 1.6E-66 3.5E-71 610.9 55.8 506 201-733 26-570 (632)
27 PRK13295 cyclohexanecarboxylat 100.0 2.8E-66 6.1E-71 600.1 56.2 492 201-733 25-544 (547)
28 PLN02860 o-succinylbenzoate-Co 100.0 1.9E-66 4.2E-71 603.3 49.7 496 201-737 8-558 (563)
29 PRK13382 acyl-CoA synthetase; 100.0 2.4E-65 5.2E-70 590.7 52.6 474 201-729 44-536 (537)
30 PRK06334 long chain fatty acid 100.0 7.1E-66 1.5E-70 594.8 48.1 480 200-733 19-535 (539)
31 PLN02736 long-chain acyl-CoA s 100.0 6.3E-66 1.4E-70 608.3 48.3 507 200-739 44-647 (651)
32 PLN02574 4-coumarate--CoA liga 100.0 4.7E-65 1E-69 591.3 51.4 489 200-733 41-554 (560)
33 PLN02246 4-coumarate--CoA liga 100.0 1.9E-64 4.2E-69 583.5 52.9 486 201-732 24-535 (537)
34 PRK08314 long-chain-fatty-acid 100.0 3.7E-64 8E-69 582.4 53.4 496 201-733 11-542 (546)
35 PRK05677 long-chain-fatty-acid 100.0 4.2E-64 9.2E-69 583.7 52.9 495 201-734 25-558 (562)
36 PRK07656 long-chain-fatty-acid 100.0 8.5E-64 1.8E-68 574.6 54.8 487 201-729 6-512 (513)
37 PRK05852 acyl-CoA synthetase; 100.0 7.2E-64 1.6E-68 578.3 52.4 500 192-733 8-532 (534)
38 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.2E-63 2.6E-68 577.0 52.4 487 201-728 23-537 (538)
39 PLN02614 long-chain acyl-CoA s 100.0 1.5E-64 3.2E-69 595.8 45.0 509 200-740 45-656 (666)
40 PRK06839 acyl-CoA synthetase; 100.0 3E-63 6.5E-68 567.7 54.3 471 202-732 4-494 (496)
41 PRK12583 acyl-CoA synthetase; 100.0 4.7E-63 1E-67 574.7 54.1 501 201-735 19-554 (558)
42 PRK05857 acyl-CoA synthetase; 100.0 1.5E-63 3.2E-68 576.2 48.3 486 201-736 15-534 (540)
43 PRK05605 long-chain-fatty-acid 100.0 1.2E-62 2.6E-67 573.0 55.5 495 201-734 33-570 (573)
44 PRK06145 acyl-CoA synthetase; 100.0 9.7E-63 2.1E-67 563.8 53.2 475 201-732 3-496 (497)
45 PRK08316 acyl-CoA synthetase; 100.0 1.5E-62 3.3E-67 565.6 54.6 493 199-735 10-521 (523)
46 PRK09274 peptide synthase; Pro 100.0 3.7E-63 8E-68 574.8 49.2 494 201-734 7-549 (552)
47 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.4E-62 3.1E-67 566.5 53.4 482 201-728 24-527 (527)
48 PRK06087 short chain acyl-CoA 100.0 2E-62 4.4E-67 567.9 54.9 494 201-735 24-538 (547)
49 PRK06187 long-chain-fatty-acid 100.0 3E-62 6.5E-67 562.5 54.6 488 201-733 7-519 (521)
50 PRK06155 crotonobetaine/carnit 100.0 2.8E-62 6E-67 565.7 54.3 481 201-732 22-523 (542)
51 PRK07470 acyl-CoA synthetase; 100.0 2E-62 4.3E-67 565.6 52.8 485 201-734 8-519 (528)
52 PRK03640 O-succinylbenzoic aci 100.0 1.3E-62 2.9E-67 560.5 50.7 460 201-733 3-482 (483)
53 PRK08315 AMP-binding domain pr 100.0 4E-62 8.8E-67 567.0 55.5 500 201-734 17-552 (559)
54 PRK07514 malonyl-CoA synthase; 100.0 3.1E-62 6.7E-67 560.6 53.6 478 201-733 4-501 (504)
55 PLN02861 long-chain-fatty-acid 100.0 2.6E-63 5.7E-68 585.5 45.7 510 199-740 42-653 (660)
56 PRK07769 long-chain-fatty-acid 100.0 6.3E-63 1.4E-67 581.4 48.8 493 201-734 22-615 (631)
57 PRK07638 acyl-CoA synthetase; 100.0 1.8E-62 4E-67 560.1 51.0 461 202-734 3-482 (487)
58 PRK05620 long-chain-fatty-acid 100.0 2.9E-62 6.3E-67 570.0 53.1 504 201-734 11-558 (576)
59 TIGR02262 benz_CoA_lig benzoat 100.0 3.9E-62 8.5E-67 560.4 53.0 486 198-729 2-507 (508)
60 PRK13390 acyl-CoA synthetase; 100.0 2.6E-62 5.5E-67 561.0 51.2 473 208-728 5-501 (501)
61 PLN02330 4-coumarate--CoA liga 100.0 4.3E-62 9.3E-67 565.0 51.6 483 200-734 28-542 (546)
62 COG1021 EntE Peptide arylation 100.0 1.9E-63 4.1E-68 505.6 35.0 488 201-733 29-538 (542)
63 PRK07008 long-chain-fatty-acid 100.0 7.3E-62 1.6E-66 562.1 52.6 492 201-733 11-533 (539)
64 PRK08008 caiC putative crotono 100.0 1.2E-61 2.6E-66 557.7 53.4 490 200-728 7-517 (517)
65 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.5E-61 3.1E-66 556.5 53.4 485 202-729 2-514 (515)
66 PRK07786 long-chain-fatty-acid 100.0 1.2E-61 2.6E-66 560.7 52.9 487 202-734 19-525 (542)
67 PRK05851 long-chain-fatty-acid 100.0 1.1E-62 2.4E-67 566.9 43.6 473 200-733 2-522 (525)
68 PRK12476 putative fatty-acid-- 100.0 2.9E-62 6.4E-67 573.5 47.0 490 201-733 35-606 (612)
69 PRK08043 bifunctional acyl-[ac 100.0 2.7E-62 5.8E-67 583.4 47.1 481 201-733 205-713 (718)
70 PRK10946 entE enterobactin syn 100.0 2.2E-61 4.8E-66 557.7 53.3 486 201-734 26-533 (536)
71 PRK13388 acyl-CoA synthetase; 100.0 3.4E-61 7.3E-66 556.4 54.4 469 201-734 4-507 (540)
72 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.2E-61 2.5E-66 555.6 50.1 476 202-732 2-501 (502)
73 PRK06188 acyl-CoA synthetase; 100.0 7E-61 1.5E-65 552.2 54.3 481 201-732 13-516 (524)
74 PRK12492 long-chain-fatty-acid 100.0 3.1E-61 6.8E-66 559.6 51.8 491 201-730 25-561 (562)
75 PRK09088 acyl-CoA synthetase; 100.0 4.6E-61 1E-65 548.7 51.7 462 207-733 2-485 (488)
76 PLN03102 acyl-activating enzym 100.0 8.3E-61 1.8E-65 557.4 52.6 493 201-734 15-555 (579)
77 PTZ00342 acyl-CoA synthetase; 100.0 3.7E-61 7.9E-66 566.6 49.2 503 201-736 62-737 (746)
78 PRK06710 long-chain-fatty-acid 100.0 7.9E-61 1.7E-65 556.6 50.7 496 201-735 25-557 (563)
79 PRK06018 putative acyl-CoA syn 100.0 1.7E-60 3.8E-65 551.1 53.2 493 201-733 11-534 (542)
80 PRK06178 acyl-CoA synthetase; 100.0 2.8E-60 6E-65 552.5 53.9 503 192-733 26-565 (567)
81 PRK04813 D-alanine--poly(phosp 100.0 2.2E-60 4.7E-65 544.9 52.2 476 202-732 4-502 (503)
82 TIGR03205 pimA dicarboxylate-- 100.0 2.8E-60 6.1E-65 549.2 52.9 491 200-728 21-541 (541)
83 PRK07867 acyl-CoA synthetase; 100.0 4.3E-60 9.4E-65 545.6 53.8 466 201-734 6-508 (529)
84 PRK07059 Long-chain-fatty-acid 100.0 4.3E-60 9.4E-65 549.7 54.1 493 200-730 23-555 (557)
85 PRK08279 long-chain-acyl-CoA s 100.0 2.1E-60 4.5E-65 557.1 51.3 482 201-734 38-565 (600)
86 PRK13391 acyl-CoA synthetase; 100.0 6E-60 1.3E-64 542.7 53.0 482 208-733 5-509 (511)
87 PRK08180 feruloyl-CoA synthase 100.0 6.6E-61 1.4E-65 562.0 45.7 497 201-741 40-604 (614)
88 PRK07787 acyl-CoA synthetase; 100.0 3E-60 6.6E-65 539.5 49.5 436 213-729 12-469 (471)
89 PRK08633 2-acyl-glycerophospho 100.0 1.3E-60 2.8E-65 599.4 51.2 489 200-733 615-1143(1146)
90 PRK06164 acyl-CoA synthetase; 100.0 4.4E-60 9.5E-65 547.6 51.4 493 201-734 11-533 (540)
91 PRK08751 putative long-chain f 100.0 4.6E-60 1E-64 549.8 51.6 492 201-731 26-558 (560)
92 PLN02387 long-chain-fatty-acid 100.0 7.7E-61 1.7E-65 567.0 44.8 514 200-739 58-695 (696)
93 PRK13383 acyl-CoA synthetase; 100.0 8.5E-60 1.8E-64 542.1 50.6 459 201-728 36-515 (516)
94 PRK07798 acyl-CoA synthetase; 100.0 3E-59 6.5E-64 539.3 54.3 490 201-733 4-532 (533)
95 PLN02430 long-chain-fatty-acid 100.0 2.4E-60 5.2E-65 559.5 45.3 511 198-739 40-652 (660)
96 PTZ00216 acyl-CoA synthetase; 100.0 3.8E-60 8.2E-65 562.3 45.2 501 201-740 70-698 (700)
97 PRK08276 long-chain-fatty-acid 100.0 5.7E-59 1.2E-63 533.4 51.6 465 230-735 9-498 (502)
98 PLN03051 acyl-activating enzym 100.0 3.2E-59 7E-64 534.6 48.2 450 264-734 1-492 (499)
99 PLN02479 acetate-CoA ligase 100.0 1.1E-58 2.5E-63 538.6 51.3 499 202-733 22-558 (567)
100 PRK08974 long-chain-fatty-acid 100.0 3.2E-58 6.9E-63 534.4 54.7 495 201-735 24-557 (560)
101 PRK12582 acyl-CoA synthetase; 100.0 3.3E-59 7.3E-64 548.6 45.3 507 199-750 48-622 (624)
102 PRK07868 acyl-CoA synthetase; 100.0 2.2E-58 4.8E-63 563.3 53.7 509 146-732 407-957 (994)
103 PRK07445 O-succinylbenzoic aci 100.0 1E-58 2.2E-63 522.9 44.8 411 232-735 19-449 (452)
104 PRK06814 acylglycerophosphoeth 100.0 2.2E-58 4.8E-63 577.8 49.7 482 201-735 632-1134(1140)
105 PRK12406 long-chain-fatty-acid 100.0 2.3E-57 5E-62 521.0 53.2 475 218-734 3-504 (509)
106 PRK09192 acyl-CoA synthetase; 100.0 4.2E-58 9.1E-63 535.2 46.1 486 200-734 21-567 (579)
107 PRK05850 acyl-CoA synthetase; 100.0 1.1E-57 2.4E-62 531.8 47.4 493 202-734 3-569 (578)
108 PRK08162 acyl-CoA synthetase; 100.0 3.5E-56 7.6E-61 515.6 54.6 488 201-733 19-539 (545)
109 PRK09029 O-succinylbenzoic aci 100.0 4.2E-57 9E-62 512.0 45.3 429 206-735 9-455 (458)
110 COG1022 FAA1 Long-chain acyl-C 100.0 4.7E-56 1E-60 499.5 41.1 498 192-739 8-607 (613)
111 PRK08308 acyl-CoA synthetase; 100.0 5.7E-55 1.2E-59 487.9 46.7 384 230-728 6-408 (414)
112 TIGR01923 menE O-succinylbenzo 100.0 6.9E-55 1.5E-59 490.3 46.0 416 234-727 1-436 (436)
113 PRK07768 long-chain-fatty-acid 100.0 3.3E-55 7.2E-60 507.4 44.4 479 202-732 4-544 (545)
114 KOG1256 Long-chain acyl-CoA sy 100.0 1.9E-53 4.2E-58 470.5 42.1 516 192-739 69-686 (691)
115 COG1020 EntF Non-ribosomal pep 100.0 1.9E-51 4.1E-56 485.4 37.0 475 102-652 148-642 (642)
116 PF00501 AMP-binding: AMP-bind 100.0 4.6E-51 1E-55 456.5 32.9 391 206-634 1-397 (417)
117 KOG1180 Acyl-CoA synthetase [L 100.0 1.3E-49 2.8E-54 420.2 32.7 481 228-739 85-675 (678)
118 KOG1179 Very long-chain acyl-C 100.0 1.7E-48 3.7E-53 413.8 38.0 486 201-731 78-611 (649)
119 TIGR01733 AA-adenyl-dom amino 100.0 8.2E-47 1.8E-51 420.7 40.7 378 234-659 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 4.3E-43 9.3E-48 384.4 34.4 306 384-733 32-357 (358)
121 PTZ00297 pantothenate kinase; 100.0 8.2E-42 1.8E-46 417.4 42.4 486 192-740 419-1002(1452)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.1E-34 4.6E-39 315.8 29.2 271 387-723 95-386 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 1.1E-32 2.3E-37 308.8 30.1 309 385-725 73-418 (422)
124 KOG1178 Non-ribosomal peptide 100.0 7.4E-33 1.6E-37 322.2 25.5 489 201-732 37-578 (1032)
125 TIGR03335 F390_ftsA coenzyme F 99.9 1.7E-25 3.8E-30 251.2 29.7 310 384-724 83-440 (445)
126 TIGR03089 conserved hypothetic 99.9 2E-25 4.2E-30 227.2 22.8 223 207-483 3-227 (227)
127 KOG3628 Predicted AMP-binding 99.9 1E-23 2.3E-28 237.8 37.1 497 200-733 770-1351(1363)
128 COG1541 PaaK Coenzyme F390 syn 99.9 2.9E-20 6.2E-25 199.4 29.4 306 385-723 88-429 (438)
129 PRK09188 serine/threonine prot 99.8 8E-19 1.7E-23 188.9 15.5 126 623-755 207-351 (365)
130 KOG3628 Predicted AMP-binding 99.7 2.1E-14 4.6E-19 163.4 25.7 472 213-733 106-704 (1363)
131 TIGR02304 aden_form_hyp probab 99.5 2.8E-12 6E-17 141.7 26.3 239 389-678 101-378 (430)
132 PF13193 AMP-binding_C: AMP-bi 99.5 1.8E-13 3.9E-18 113.0 8.3 70 643-721 1-73 (73)
133 PF04443 LuxE: Acyl-protein sy 98.3 4.7E-05 1E-09 82.7 18.8 202 384-599 86-310 (365)
134 PF14535 AMP-binding_C_2: AMP- 97.5 0.00087 1.9E-08 58.3 9.6 85 636-724 1-91 (96)
135 PF03321 GH3: GH3 auxin-respon 97.4 0.0011 2.4E-08 76.0 12.5 144 508-680 266-452 (528)
136 PLN02249 indole-3-acetic acid- 95.9 0.53 1.2E-05 54.7 19.4 28 384-411 97-125 (597)
137 PLN02620 indole-3-acetic acid- 95.4 0.79 1.7E-05 52.9 18.2 27 385-411 99-126 (612)
138 PLN02247 indole-3-acetic acid- 94.8 0.88 1.9E-05 52.6 16.5 27 385-411 87-114 (606)
139 PF13745 HxxPF_rpt: HxxPF-repe 94.8 0.002 4.3E-08 55.2 -3.9 44 95-140 47-90 (91)
140 COG1541 PaaK Coenzyme F390 syn 92.5 0.53 1.1E-05 51.9 8.9 83 231-314 108-192 (438)
141 TIGR03335 F390_ftsA coenzyme F 79.3 12 0.00025 42.3 10.4 79 231-312 104-184 (445)
142 TIGR02155 PA_CoA_ligase phenyl 77.1 13 0.00029 41.4 10.0 83 231-314 93-177 (422)
143 TIGR03089 conserved hypothetic 75.3 14 0.0003 37.5 8.7 77 214-305 148-226 (227)
144 PF09580 Spore_YhcN_YlaJ: Spor 69.8 12 0.00026 36.3 6.4 56 641-701 77-132 (177)
145 PLN02736 long-chain acyl-CoA s 69.0 66 0.0014 38.2 13.8 121 385-518 57-181 (651)
146 COG0399 WecE Predicted pyridox 58.5 51 0.0011 36.1 9.1 66 242-311 59-129 (374)
147 PRK07656 long-chain-fatty-acid 57.2 90 0.002 35.4 11.7 96 214-313 164-264 (513)
148 COG0365 Acs Acyl-coenzyme A sy 56.0 2.9E+02 0.0062 32.0 15.0 100 388-496 25-127 (528)
149 PRK08315 AMP-binding domain pr 54.2 1.2E+02 0.0025 35.1 12.1 96 215-313 198-298 (559)
150 PTZ00342 acyl-CoA synthetase; 52.8 1.8E+02 0.0039 35.3 13.5 120 385-519 74-209 (746)
151 PRK12583 acyl-CoA synthetase; 49.0 1.7E+02 0.0037 33.6 12.4 97 214-313 199-300 (558)
152 KOG0883 Cyclophilin type, U bo 48.7 13 0.00028 39.7 2.5 63 16-82 313-379 (518)
153 PRK06187 long-chain-fatty-acid 47.0 2.1E+02 0.0045 32.4 12.6 96 214-313 165-264 (521)
154 PF01514 YscJ_FliF: Secretory 46.9 64 0.0014 32.2 7.1 74 638-713 114-194 (206)
155 PLN02387 long-chain-fatty-acid 45.9 1.6E+02 0.0035 35.3 11.8 86 423-519 125-210 (696)
156 PF00501 AMP-binding: AMP-bind 45.6 1.4E+02 0.003 32.8 10.5 89 385-487 8-99 (417)
157 TIGR02898 spore_YhcN_YlaJ spor 45.5 89 0.0019 29.7 7.4 56 642-702 57-114 (158)
158 PF01041 DegT_DnrJ_EryC1: DegT 42.8 55 0.0012 35.7 6.6 66 243-312 51-121 (363)
159 PRK06334 long chain fatty acid 42.7 2.7E+02 0.0059 32.0 12.7 98 213-313 180-282 (539)
160 KOG1177 Long chain fatty acid 42.6 1.6E+02 0.0034 33.2 9.5 111 404-519 75-199 (596)
161 PRK05934 type III secretion sy 42.4 1.4E+02 0.0031 31.5 8.8 89 624-714 52-149 (341)
162 PRK07788 acyl-CoA synthetase; 42.1 2.2E+02 0.0047 32.8 11.8 87 406-497 74-162 (549)
163 PLN03051 acyl-activating enzym 41.7 1.7E+02 0.0038 33.2 10.8 96 215-313 118-217 (499)
164 COG1167 ARO8 Transcriptional r 41.2 1E+02 0.0022 35.0 8.5 89 426-541 176-264 (459)
165 PRK10524 prpE propionyl-CoA sy 40.1 1.9E+02 0.0041 34.0 11.1 97 385-489 66-164 (629)
166 PRK09274 peptide synthase; Pro 38.8 2.4E+02 0.0052 32.4 11.5 100 385-489 19-121 (552)
167 PLN02430 long-chain-fatty-acid 38.4 4.7E+02 0.01 31.1 14.0 122 385-518 55-180 (660)
168 TIGR01923 menE O-succinylbenzo 37.8 2.4E+02 0.0052 31.1 11.0 93 215-313 110-206 (436)
169 TIGR02080 O_succ_thio_ly O-suc 37.8 2.4E+02 0.0053 31.0 10.7 73 254-327 87-159 (382)
170 TIGR02188 Ac_CoA_lig_AcsA acet 37.5 2E+02 0.0044 33.8 10.8 98 385-490 70-169 (625)
171 PRK04319 acetyl-CoA synthetase 36.5 2.9E+02 0.0063 32.0 11.7 97 214-313 203-304 (570)
172 TIGR03098 ligase_PEP_1 acyl-Co 36.5 2.2E+02 0.0048 32.2 10.6 86 406-497 25-113 (515)
173 PRK00174 acetyl-CoA synthetase 36.3 2.8E+02 0.0061 32.7 11.7 97 385-490 80-179 (637)
174 PLN02861 long-chain-fatty-acid 36.3 5.6E+02 0.012 30.4 14.2 87 406-497 77-165 (660)
175 PLN03052 acetate--CoA ligase; 36.1 2.6E+02 0.0057 33.8 11.4 100 385-490 188-289 (728)
176 PRK08043 bifunctional acyl-[ac 35.5 3.2E+02 0.007 32.8 12.2 96 214-312 363-463 (718)
177 TIGR02379 ECA_wecE TDP-4-keto- 35.1 1.2E+02 0.0026 33.4 7.6 73 247-326 61-138 (376)
178 PRK13295 cyclohexanecarboxylat 33.7 2.6E+02 0.0057 32.1 10.7 97 385-490 37-136 (547)
179 PRK08574 cystathionine gamma-s 33.2 2.8E+02 0.0061 30.6 10.2 72 254-327 89-160 (385)
180 PRK05939 hypothetical protein; 33.1 2.5E+02 0.0055 31.1 9.9 78 247-327 77-154 (397)
181 PRK06702 O-acetylhomoserine am 33.0 3.1E+02 0.0068 30.8 10.6 79 246-327 90-170 (432)
182 PLN02654 acetate-CoA ligase 33.0 2.8E+02 0.006 33.1 10.9 97 386-490 103-201 (666)
183 TIGR01733 AA-adenyl-dom amino 33.0 1.8E+02 0.0039 31.7 8.8 73 418-495 14-86 (408)
184 PRK05620 long-chain-fatty-acid 32.5 2.5E+02 0.0054 32.6 10.3 88 405-497 37-127 (576)
185 TIGR01217 ac_ac_CoA_syn acetoa 32.3 3E+02 0.0065 32.7 11.1 94 387-489 99-194 (652)
186 PRK11706 TDP-4-oxo-6-deoxy-D-g 32.2 1.5E+02 0.0033 32.4 8.0 60 248-311 62-126 (375)
187 TIGR02262 benz_CoA_lig benzoat 32.0 3.8E+02 0.0083 30.3 11.6 98 214-313 159-261 (508)
188 PRK13383 acyl-CoA synthetase; 32.0 2.2E+02 0.0049 32.4 9.7 68 424-496 80-147 (516)
189 cd06534 ALDH-SF NAD(P)+-depend 31.9 3.2E+02 0.0068 29.7 10.4 37 445-481 110-146 (367)
190 PLN03026 histidinol-phosphate 31.8 5.2E+02 0.011 28.2 12.2 69 254-325 124-196 (380)
191 cd01445 TST_Repeats Thiosulfat 31.6 1.2E+02 0.0026 28.0 5.9 41 242-282 80-123 (138)
192 COG0031 CysK Cysteine synthase 31.6 3.6E+02 0.0077 28.6 9.9 61 250-312 54-116 (300)
193 PLN02614 long-chain acyl-CoA s 31.3 4.2E+02 0.009 31.6 12.0 70 423-497 98-167 (666)
194 PRK03584 acetoacetyl-CoA synth 30.9 3.3E+02 0.0072 32.2 11.1 96 386-490 98-195 (655)
195 PRK14807 histidinol-phosphate 30.8 6.3E+02 0.014 27.1 12.5 69 254-325 97-169 (351)
196 PRK08008 caiC putative crotono 30.8 3.5E+02 0.0075 30.7 11.0 68 423-495 56-123 (517)
197 TIGR02544 III_secr_YscJ type I 30.4 2.7E+02 0.0059 27.4 8.5 69 641-711 109-184 (193)
198 PF09153 DUF1938: Domain of un 29.9 73 0.0016 26.5 3.5 47 217-267 15-62 (86)
199 PRK13388 acyl-CoA synthetase; 29.4 4.3E+02 0.0093 30.4 11.5 84 406-495 26-113 (540)
200 PRK05852 acyl-CoA synthetase; 29.4 5.5E+02 0.012 29.3 12.4 81 230-313 193-276 (534)
201 PLN03102 acyl-activating enzym 29.3 3.3E+02 0.0071 31.7 10.6 84 406-495 39-125 (579)
202 cd07078 ALDH NAD(P)+ dependent 29.0 3.7E+02 0.008 29.9 10.5 37 445-481 114-150 (432)
203 TIGR02370 pyl_corrinoid methyl 28.9 5.7E+02 0.012 25.1 11.2 88 431-526 86-182 (197)
204 KOG1176 Acyl-CoA synthetase [L 28.8 2.9E+02 0.0063 32.0 9.6 90 404-498 43-136 (537)
205 PRK06839 acyl-CoA synthetase; 28.7 3.2E+02 0.007 30.7 10.2 86 405-495 26-114 (496)
206 PRK08308 acyl-CoA synthetase; 28.4 6.2E+02 0.013 27.7 12.2 96 214-313 99-199 (414)
207 PRK07798 acyl-CoA synthetase; 28.3 4.7E+02 0.01 29.6 11.6 70 423-497 47-116 (533)
208 PRK05857 acyl-CoA synthetase; 28.3 3.1E+02 0.0067 31.5 10.1 95 385-491 27-123 (540)
209 PRK08314 long-chain-fatty-acid 28.2 2.8E+02 0.006 31.8 9.7 86 406-496 35-123 (546)
210 COG0520 csdA Selenocysteine ly 28.1 8.6E+02 0.019 27.0 13.4 87 242-330 97-188 (405)
211 PRK06164 acyl-CoA synthetase; 28.1 5.2E+02 0.011 29.5 11.9 96 214-313 179-278 (540)
212 PRK08045 cystathionine gamma-s 28.0 4.7E+02 0.01 28.8 10.9 72 254-327 88-160 (386)
213 TIGR02316 propion_prpE propion 28.0 3.8E+02 0.0082 31.6 10.9 97 385-489 65-163 (628)
214 PLN02574 4-coumarate--CoA liga 27.9 3E+02 0.0065 31.8 9.9 100 385-496 52-154 (560)
215 PRK06155 crotonobetaine/carnit 27.5 3.4E+02 0.0074 31.2 10.2 70 423-497 65-134 (542)
216 PTZ00237 acetyl-CoA synthetase 26.8 2.5E+02 0.0055 33.2 9.1 80 405-489 91-172 (647)
217 PRK07529 AMP-binding domain pr 26.7 4.5E+02 0.0098 31.0 11.2 97 385-488 38-136 (632)
218 PRK13237 tyrosine phenol-lyase 26.2 2.9E+02 0.0064 31.2 8.7 50 250-304 110-174 (460)
219 PRK07503 methionine gamma-lyas 26.1 4.4E+02 0.0095 29.2 10.3 72 254-327 101-173 (403)
220 COG4009 Uncharacterized protei 25.9 2.9E+02 0.0063 22.8 6.2 67 231-308 8-77 (88)
221 PLN02860 o-succinylbenzoate-Co 25.8 3.9E+02 0.0084 30.9 10.3 80 406-490 32-113 (563)
222 PRK08751 putative long-chain f 25.7 3.1E+02 0.0067 31.6 9.5 96 385-495 38-137 (560)
223 PRK13391 acyl-CoA synthetase; 25.7 5E+02 0.011 29.4 11.1 98 385-494 10-109 (511)
224 PLN02246 4-coumarate--CoA liga 25.3 3.1E+02 0.0066 31.4 9.3 99 385-495 36-136 (537)
225 TIGR03443 alpha_am_amid L-amin 25.0 3.3E+02 0.0072 35.6 10.5 98 385-488 249-349 (1389)
226 COG0318 CaiC Acyl-CoA syntheta 24.9 6.1E+02 0.013 29.2 11.7 98 214-312 169-272 (534)
227 PRK05677 long-chain-fatty-acid 24.9 4.4E+02 0.0094 30.4 10.5 82 406-493 49-134 (562)
228 PRK07638 acyl-CoA synthetase; 24.9 5.6E+02 0.012 28.7 11.3 80 230-313 160-240 (487)
229 PRK03321 putative aminotransfe 24.9 5.8E+02 0.013 27.3 10.9 67 254-324 95-165 (352)
230 PRK05850 acyl-CoA synthetase; 24.8 6.4E+02 0.014 29.1 12.0 105 385-495 14-123 (578)
231 PRK07514 malonyl-CoA synthase; 24.6 3.5E+02 0.0075 30.5 9.5 86 405-495 27-114 (504)
232 cd07050 BMC_EutL_repeat2 ethan 24.5 1.4E+02 0.0029 24.8 4.1 42 247-288 4-46 (87)
233 PRK15407 lipopolysaccharide bi 24.3 2.4E+02 0.0052 31.7 7.9 58 251-312 105-167 (438)
234 cd06451 AGAT_like Alanine-glyo 24.3 6.1E+02 0.013 27.0 11.0 90 242-332 60-152 (356)
235 COG0436 Aspartate/tyrosine/aro 24.3 9.8E+02 0.021 26.4 13.2 74 244-322 101-181 (393)
236 PRK07867 acyl-CoA synthetase; 24.3 4.4E+02 0.0096 30.2 10.3 85 406-495 28-115 (529)
237 PRK10595 SOS cell division inh 24.3 2.7E+02 0.0058 26.7 6.9 65 246-310 70-140 (164)
238 cd00615 Orn_deC_like Ornithine 23.9 5.4E+02 0.012 26.9 10.1 70 254-327 96-176 (294)
239 PRK06234 methionine gamma-lyas 23.8 6.4E+02 0.014 27.9 11.0 72 254-327 100-172 (400)
240 PRK09509 fieF ferrous iron eff 23.6 2.9E+02 0.0063 29.2 8.0 70 641-713 215-286 (299)
241 PRK08316 acyl-CoA synthetase; 23.6 3.7E+02 0.0081 30.4 9.6 87 405-496 35-123 (523)
242 KOG0633 Histidinol phosphate a 23.4 87 0.0019 32.1 3.5 77 247-323 100-179 (375)
243 PRK05605 long-chain-fatty-acid 23.4 4E+02 0.0087 30.8 9.9 84 406-495 57-143 (573)
244 PF01037 AsnC_trans_reg: AsnC 23.2 2.9E+02 0.0062 21.7 6.2 33 641-678 12-44 (74)
245 PRK09265 aminotransferase AlaT 23.1 1E+03 0.022 26.1 14.0 65 254-322 116-186 (404)
246 TIGR03588 PseC UDP-4-keto-6-de 23.0 3.7E+02 0.008 29.3 9.0 67 243-312 55-129 (380)
247 PRK11658 UDP-4-amino-4-deoxy-L 22.5 2.7E+02 0.0058 30.5 7.7 63 245-311 61-128 (379)
248 PRK09331 Sep-tRNA:Cys-tRNA syn 22.5 6.8E+02 0.015 27.4 10.9 70 254-326 99-180 (387)
249 PLN02565 cysteine synthase 22.5 6.1E+02 0.013 27.2 10.2 72 242-313 50-122 (322)
250 PRK12492 long-chain-fatty-acid 22.0 4E+02 0.0087 30.7 9.4 81 405-491 48-132 (562)
251 PRK06188 acyl-CoA synthetase; 21.8 7.6E+02 0.017 27.9 11.7 95 215-313 167-264 (524)
252 PRK03640 O-succinylbenzoic aci 21.7 8.1E+02 0.018 27.2 11.8 96 214-313 139-238 (483)
253 TIGR01139 cysK cysteine syntha 21.6 6.6E+02 0.014 26.3 10.2 65 247-313 46-112 (298)
254 PLN02479 acetate-CoA ligase 21.4 5.1E+02 0.011 29.9 10.2 65 423-492 64-128 (567)
255 TIGR03590 PseG pseudaminic aci 21.3 5.1E+02 0.011 27.0 9.2 76 231-313 10-89 (279)
256 PRK08162 acyl-CoA synthetase; 21.3 4E+02 0.0087 30.5 9.2 84 406-495 43-129 (545)
257 PLN02556 cysteine synthase/L-3 21.1 5.7E+02 0.012 28.0 9.7 62 251-312 103-165 (368)
258 cd07097 ALDH_KGSADH-YcbD Bacil 21.0 6E+02 0.013 28.8 10.3 89 431-532 138-233 (473)
259 TIGR02618 tyr_phenol_ly tyrosi 20.9 6.1E+02 0.013 28.6 9.9 51 249-304 102-167 (450)
260 TIGR03595 Obg_CgtA_exten Obg f 20.9 1E+02 0.0022 24.7 2.9 20 244-263 44-63 (69)
261 COG1916 Uncharacterized homolo 20.8 1.6E+02 0.0036 31.7 5.1 79 204-292 28-123 (388)
262 cd01449 TST_Repeat_2 Thiosulfa 20.8 1.9E+02 0.004 25.4 5.0 40 243-282 64-103 (118)
263 PRK08279 long-chain-acyl-CoA s 20.6 5.4E+02 0.012 29.9 10.2 85 406-495 62-148 (600)
264 PRK06018 putative acyl-CoA syn 20.5 4.6E+02 0.01 30.0 9.5 86 406-496 39-126 (542)
265 cd07109 ALDH_AAS00426 Uncharac 20.4 8.4E+02 0.018 27.4 11.3 89 431-532 120-215 (454)
266 PRK15348 type III secretion sy 20.4 5.4E+02 0.012 26.5 8.6 70 641-712 109-184 (249)
267 PRK11761 cysM cysteine synthas 20.3 6.5E+02 0.014 26.5 9.8 88 217-312 28-117 (296)
268 PTZ00216 acyl-CoA synthetase; 20.1 7.6E+02 0.016 29.6 11.5 89 404-497 119-209 (700)
269 PHA02553 6 baseplate wedge sub 20.0 2.8E+02 0.0061 32.4 7.2 70 624-698 305-377 (611)
No 1
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.2e-95 Score=861.24 Aligned_cols=636 Identities=90% Similarity=1.512 Sum_probs=544.9
Q ss_pred CcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhccccccccccc-ccccccccccCCCcccccCCCccccHH
Q 004348 124 NDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQ-RVCSENLDVRKGNVKIEWFKGGITNIC 202 (759)
Q Consensus 124 ~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~wf~~~~~n~~ 202 (759)
....++++.|+..++.+++.+|+++++++++||+.||.++++++.|..+|+. .++..+.+++.++..++||+++++|.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~~ 90 (666)
T PLN02654 11 NDLVFPSKDFSAQALVSSPQQYMEMYKRSVDDPAGFWSDIASQFYWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNIC 90 (666)
T ss_pred CcccCCCHHHHhhccCCCHHHHHHHHHHHhcCHHHHHHHHHHhCCeecCCCcceEeccCCCcccCCccccccCCCEeeHH
Confidence 3456888999998998888999999999999999999999988899988752 254333444445456799999999999
Q ss_pred HHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCC
Q 004348 203 YNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 282 (759)
Q Consensus 203 ~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGa 282 (759)
+++|++++++.+|+++|+++..++.+..+.+||+||.++++++|+.|+++|+++||+|+|+++|++|+++++|||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 99999988624899999998654434568999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCC
Q 004348 283 VHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQD 362 (759)
Q Consensus 283 v~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~ 362 (759)
+++|+++.++.+++.++|++++|++||+++...++.+.+.++..++.++.........+..++.+............+..
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQE 250 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccccccccc
Confidence 99999999999999999999999999999988888888888888877665431111122333433321100000112223
Q ss_pred CCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhc
Q 004348 363 GRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWIT 442 (759)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~ 442 (759)
.++.+|++.+...+...+.....++|++||+|||||||+||||+++|++++..........++++++|++++.+|++|++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 330 (666)
T PLN02654 251 GRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWIT 330 (666)
T ss_pred CCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhh
Confidence 34556766654433333344567899999999999999999999999997766666677778999999999999999999
Q ss_pred hhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCC
Q 004348 443 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 522 (759)
Q Consensus 443 g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~ 522 (759)
++.+.++++|+.|++++++++.+.++++..+|++|++++||+++++|++++.|++...+.....++++||.++++||+++
T Consensus 331 g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~ 410 (666)
T PLN02654 331 GHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPIN 410 (666)
T ss_pred hhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCC
Confidence 98888999999999999999877778999999999999999999999999999987644345567899999999999999
Q ss_pred HHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCC
Q 004348 523 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 602 (759)
Q Consensus 523 ~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~ 602 (759)
+++++++.+.+|..++++.+.||+||+++..+...+...+.+++++|+|++|++++|+|++|++++.|+.|||+|++|||
T Consensus 411 ~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~Gel~v~~~~p 490 (666)
T PLN02654 411 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECSGYLCVKKSWP 490 (666)
T ss_pred HHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCceEEEEcCCCc
Confidence 99999999999865688999999999988766544433356788999999999999999999999999999999999999
Q ss_pred cccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEe
Q 004348 603 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVE 663 (759)
Q Consensus 603 ~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~ 663 (759)
++++|||++++++...|+...+|||+|||+|+ +|+||+|.|||++|.+||+|.||+|++++
T Consensus 491 ~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~ 570 (666)
T PLN02654 491 GAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIE 570 (666)
T ss_pred hhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEeeE
Confidence 99999999999999999887789999999998 89999999999999999999999999999
Q ss_pred cCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCC
Q 004348 664 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTST 743 (759)
Q Consensus 664 ~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~ 743 (759)
++..++.+++||+++++...++++.++|+++++++|+.|++|+.|+++++||+|+||||+|+.|++++.+...++++.++
T Consensus 571 d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~~~~~~~~~~ 650 (666)
T PLN02654 571 HEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTST 650 (666)
T ss_pred cCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCCCCCCCCccc
Confidence 99889999999999988766677788999999999999999999999999999999999999999999876546789999
Q ss_pred CCChhhHHHHHhhhcC
Q 004348 744 LADPGVVDQLIALADC 759 (759)
Q Consensus 744 ~~~p~~~~~~~~~~~~ 759 (759)
++||+++++|+++++.
T Consensus 651 ~~~~~~~~~~~~~~~~ 666 (666)
T PLN02654 651 LADPGVVDQLIALADS 666 (666)
T ss_pred ccCHHHHHHHHHhhcC
Confidence 9999999999998863
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.7e-91 Score=776.21 Aligned_cols=502 Identities=46% Similarity=0.750 Sum_probs=463.0
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMEL 270 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~ 270 (759)
+||.++++|..+|+++++.+...+|++|++|.++.++. +.+||+||.++++++|+.|++ .|+ +||||+|+||+.+|+
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~ 78 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEADRPDDTAIIFDGEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA 78 (528)
T ss_pred CCcCCceeechhhhhhhhhhccCCCceEEEEEcCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH
Confidence 59999999999999999987456799999999765433 899999999999999999986 678 999999999999999
Q ss_pred HHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccC
Q 004348 271 PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQ 350 (759)
Q Consensus 271 iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~ 350 (759)
+++||||+|+||+++|+.+.++++.++++++++++++||+++...++++.+.+++.+++++.. ++++.+.
T Consensus 79 ~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~----------~iv~~r~ 148 (528)
T COG0365 79 VIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS----------VVVVPRL 148 (528)
T ss_pred HHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc----------eEEeccc
Confidence 999999999999999999999999999999999999999999999999999998887765431 4444332
Q ss_pred ccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCc
Q 004348 351 SAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSD 430 (759)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d 430 (759)
.++|++.+...+..++....+++|++||+|||||||+||||+|+|++++..........+++.++|
T Consensus 149 --------------~~~~~~~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~D 214 (528)
T COG0365 149 --------------GLWYDEAVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGD 214 (528)
T ss_pred --------------cccHHHHhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCC
Confidence 167888887777777777799999999999999999999999999999999888888899999999
Q ss_pred EEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCC
Q 004348 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS 510 (759)
Q Consensus 431 ~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~s 510 (759)
+++++++++|++|+.+.+|++|++|+|++++++.+.+ +++++|++|++|+||+++++|+.+++|++.+. ..++++++
T Consensus 215 v~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~-~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~--~~~~dlss 291 (528)
T COG0365 215 RFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFY-SPERLWEALEKYKVTIFGTSPTFLRRLMKLGL--GEPYDLSS 291 (528)
T ss_pred EEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCC-CHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC--cccccchh
Confidence 9999999999999999999999999999999999888 89999999999999999999999999999976 56789999
Q ss_pred eeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCC
Q 004348 511 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE 590 (759)
Q Consensus 511 Lr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g 590 (759)
||.+.+.||||+++.++|+.+.+| ++|.+.||+||++++.+...+ +.++++.|+|+||+++.|+|++|+++++|
T Consensus 292 Lr~~~SaGEPLnpe~~~w~~~~~g---~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~g~~~~~~ 365 (528)
T COG0365 292 LRVLGSAGEPLNPEAFEWFYSALG---VWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDEGNPVPPG 365 (528)
T ss_pred heeeeccCCCCCHHHHHHHHHHhC---CCEeccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCCCCcCCCC
Confidence 999999999999999999999998 899999999999966655444 34666669999999999999999999999
Q ss_pred ceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcC
Q 004348 591 CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSH 651 (759)
Q Consensus 591 ~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~ 651 (759)
+ |+|+|+.|||++++|||+|||++.+.|+.. ||+|||.++ .|+||.+.|||++|.+|
T Consensus 366 ~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~---~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~h 441 (528)
T COG0365 366 V-GELVVRLPWPGMALTYWNDPERYKEAYFGR---WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAH 441 (528)
T ss_pred c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc---eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhC
Confidence 9 999999999999999999999999999864 999999877 89999999999999999
Q ss_pred CccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHH
Q 004348 652 PQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 731 (759)
Q Consensus 652 p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~ 731 (759)
|.|.||+||+++|+.+|+.++|||+++++...+ ++.++|++++++.+.++++|+.|+++++||||+||||+|+.||+++
T Consensus 442 P~VaEaAvVg~pd~~kg~~v~afVvL~~g~~~~-~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~ 520 (528)
T COG0365 442 PAVAEAAVVGVPDPGKGQIVLAFVVLAAGVEPN-ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKIL 520 (528)
T ss_pred cceeeeEEEeccCCCCCcEEEEEEEecCCCChH-HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHH
Confidence 999999999999999999999999999999877 9999999999999888999999999999999999999999999998
Q ss_pred hc
Q 004348 732 SR 733 (759)
Q Consensus 732 ~~ 733 (759)
.+
T Consensus 521 ~~ 522 (528)
T COG0365 521 HK 522 (528)
T ss_pred hh
Confidence 84
No 3
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=8.5e-90 Score=808.85 Aligned_cols=599 Identities=60% Similarity=1.086 Sum_probs=523.5
Q ss_pred hhHHHHHHHHHhhChHHHHHHhhcc-cccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEE
Q 004348 142 PQKYLEMYKRSVEDPAGFWADIASE-FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAI 220 (759)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al 220 (759)
+++|+++++++++||+.||.+++++ +.|.++|.+ +++.. .+.+.+||+++++|+++++|+++++ .+||++|+
T Consensus 4 ~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~Al 76 (625)
T TIGR02188 4 LEQYKELYEESIEDPDKFWAKLARELLDWFKPFTK-VLDWS-----FPPFYKWFVGGELNVSYNCVDRHLE-ARPDKVAI 76 (625)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhcCceecCCce-eecCC-----CCCCCeeCCCCEEEHHHHHHHHhhc-cCCCCeEE
Confidence 5789999999999999999999877 889999887 65221 1124599999999999999999998 89999999
Q ss_pred EEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHH
Q 004348 221 YWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRI 300 (759)
Q Consensus 221 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il 300 (759)
++.+++.+..+.+||+||.++++++|+.|+++|+++||+|+++++|++|+++++|||+++|++++|++|.++.+++.+++
T Consensus 77 ~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l 156 (625)
T TIGR02188 77 IWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRI 156 (625)
T ss_pred EEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHH
Confidence 98754334467899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCC-CccEEEEeccCccccccccccCCCCccchhhhcCCCCCCC
Q 004348 301 MDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI-SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKC 379 (759)
Q Consensus 301 ~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (759)
++++++++|+++...++++.+.++..+++++..+ + .++.+++++.... ...+....+.+|++.+.......
T Consensus 157 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 228 (625)
T TIGR02188 157 NDAGAKLVITADEGLRGGKVIPLKAIVDEALEKC----PVSVEHVLVVRRTGN----PVPWVEGRDVWWHDLMAKASAYC 228 (625)
T ss_pred HhcCCCEEEEcCccccCCcccchHHHHHHHHHhC----CCCccEEEEEcCCCC----CcCccccccccHHHHHhhcCCCC
Confidence 9999999999998888888888888887776654 4 4666776654321 11122234556776655443334
Q ss_pred CccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEE
Q 004348 380 EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVV 459 (759)
Q Consensus 380 ~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlv 459 (759)
+.....++++++|+|||||||+||||+++|++++.+........+++.++|++++.++++|..++.+.++.+|++|++++
T Consensus 229 ~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~v 308 (625)
T TIGR02188 229 EPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTV 308 (625)
T ss_pred CceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEE
Confidence 44556789999999999999999999999999776666666667899999999999999999998888999999999999
Q ss_pred EecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCcc
Q 004348 460 VFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCP 539 (759)
Q Consensus 460 l~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~ 539 (759)
++++.+..+++..++++|+++++|+++++|++++.|.+.........++++||.+++|||++++++++++.+.++..+++
T Consensus 309 l~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~ 388 (625)
T TIGR02188 309 MFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCP 388 (625)
T ss_pred EECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCc
Confidence 99887777799999999999999999999999999998765444456789999999999999999999999999865689
Q ss_pred EeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccC-CCceEEEEEecCCCcccccccCChhhHHhh
Q 004348 540 ISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIE-GECSGYLCIKSSWPGAFRTLYGDHERYETT 618 (759)
Q Consensus 540 l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp-~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~ 618 (759)
+++.||+||+++.++...++..+.+++++|+|++|++++|+|++|++++ .|+.|||+|+||||++++|||++++++.+.
T Consensus 389 i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~ 468 (625)
T TIGR02188 389 IVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDT 468 (625)
T ss_pred eEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHH
Confidence 9999999999987655444333456789999999999999999999999 899999999999999999999999999999
Q ss_pred hcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcC
Q 004348 619 YFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 679 (759)
Q Consensus 619 ~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 679 (759)
|+...+|||+|||+|+ +|+||+|.|||++|.+||.|.||+|++++++..++.++|||++++
T Consensus 469 ~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g~~~~a~vv~~~ 548 (625)
T TIGR02188 469 YFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKGQAIYAFVTLKD 548 (625)
T ss_pred HhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEEEEEEeCC
Confidence 9877789999999998 899999999999999999999999999999988999999999998
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCCCCChhhHHHHHh
Q 004348 680 GVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIA 755 (759)
Q Consensus 680 ~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 755 (759)
+...++++.++|+++++++|+++++|+.|+++++||+|+|||++|+.|++++.++.....+.++++||+++++|++
T Consensus 549 ~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 624 (625)
T TIGR02188 549 GYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGEEEILGDTSTLEDPSVVEELIE 624 (625)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCcccccCHHHHHHHHh
Confidence 7766666778999999999999999999999999999999999999999998875433678999999999999975
No 4
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-88 Score=796.70 Aligned_cols=608 Identities=60% Similarity=1.065 Sum_probs=521.2
Q ss_pred hhhhccCCCChhHHHHHHHHHhhChHHHHHHhhcccccccccccccccccccccCCCcccccCCCccccHHHHHHhhccc
Q 004348 132 DFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIE 211 (759)
Q Consensus 132 lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~ 211 (759)
-|...+... +++|.+++++++++|+.||.++++++.|.++|++ +++. .+.+.+||+++++|.++++|+++++
T Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~-~~~~------~~~~~~w~~~~~~n~~~~~l~~~~~ 78 (637)
T PRK00174 7 EFAANALID-MEQYKALYQESVEDPEGFWAEQAKRLDWFKPFDT-VLDW------NAPFIKWFEDGELNVSYNCLDRHLK 78 (637)
T ss_pred HHHhhcCCC-hHHHHHHHHHHhcCHHHHHHHHHHhcCeecCCcc-cccC------CCCCCccCCCCEeEHHHHHHHHhhc
Confidence 344444443 5899999999999999999999877889999988 6532 1224599999999999999999998
Q ss_pred ccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCC
Q 004348 212 AGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGF 291 (759)
Q Consensus 212 ~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~ 291 (759)
.+||++|+++.+.+++..+++||+||+++++++|+.|+++|+++||+|+|+++|++++++++|||+++|++++|++|.+
T Consensus 79 -~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~ 157 (637)
T PRK00174 79 -TRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGF 157 (637)
T ss_pred -cCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCC
Confidence 8999999998754323467899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhh
Q 004348 292 SSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDV 371 (759)
Q Consensus 292 ~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (759)
+.+++.+++++++++++|+++......+.+.+.+.+.+.+..+ +.++.+++++.... ...+....+.+|++.
T Consensus 158 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 229 (637)
T PRK00174 158 SAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANC----PSVEKVIVVRRTGG----DVDWVEGRDLWWHEL 229 (637)
T ss_pred CHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhC----CCccEEEEEcCCCC----CcCcCCCCcccHHHH
Confidence 9999999999999999999988777777777777776666554 45666666554321 111222234556666
Q ss_pred cCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHH
Q 004348 372 VPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGP 451 (759)
Q Consensus 372 ~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~ 451 (759)
........+.....+++++||+|||||||+||||+++|++++.+........++++++|++++.++++|+.++.+.++.+
T Consensus 230 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 309 (637)
T PRK00174 230 VAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGP 309 (637)
T ss_pred HhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHH
Confidence 54433333444567899999999999999999999999997666665566678999999999999999999988889999
Q ss_pred hhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHH
Q 004348 452 MLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFN 531 (759)
Q Consensus 452 L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~ 531 (759)
|++|++++++++.+..+++..++++|++++||++.++|++++.|++.........++++||.+++|||++++++++++.+
T Consensus 310 l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~ 389 (637)
T PRK00174 310 LANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYK 389 (637)
T ss_pred HHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHH
Confidence 99999999998766667999999999999999999999999999887543334457899999999999999999999999
Q ss_pred HhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCC
Q 004348 532 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGD 611 (759)
Q Consensus 532 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~ 611 (759)
.++..++++++.||+||+++..+...++....+++++|+|++|++++|+|++|+++|.|+.|||+|+||+|++++|||++
T Consensus 390 ~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~ 469 (637)
T PRK00174 390 VVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEGGNLVIKDPWPGMMRTIYGD 469 (637)
T ss_pred HhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCcEEEEEcCCCCcccccccCC
Confidence 98855689999999999987665443332234567899999999999999999999999999999999989999999999
Q ss_pred hhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEE
Q 004348 612 HERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIY 672 (759)
Q Consensus 612 ~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lv 672 (759)
++++.+.||...+|||+|||+|+ +|+||+|.|||++|.+||+|.+|+|++++++..++.++
T Consensus 470 ~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g~~~~ 549 (637)
T PRK00174 470 HERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKGQGIY 549 (637)
T ss_pred HHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCeEEE
Confidence 99999999877789999999988 89999999999999999999999999999998899999
Q ss_pred EEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCCCCChhhHHH
Q 004348 673 AFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQ 752 (759)
Q Consensus 673 a~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~~~ 752 (759)
|||++.++...++++.++|+++++++|+.|++|..|+++++||+|+|||++|++|++++.++. ...+.++++||+++++
T Consensus 550 a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 628 (637)
T PRK00174 550 AFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGEE-ILGDTSTLADPSVVEK 628 (637)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCCC-CCCCcccccCHHHHHH
Confidence 999998876555666789999999999999999999999999999999999999999987653 4678999999999999
Q ss_pred HHhhh
Q 004348 753 LIALA 757 (759)
Q Consensus 753 ~~~~~ 757 (759)
|++..
T Consensus 629 ~~~~~ 633 (637)
T PRK00174 629 LIEAR 633 (637)
T ss_pred HHHHH
Confidence 98864
No 5
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-88 Score=749.49 Aligned_cols=595 Identities=56% Similarity=0.928 Sum_probs=539.9
Q ss_pred ChhHHHHHHHHHhhChHHHHHHhhcccccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEE
Q 004348 141 SPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAI 220 (759)
Q Consensus 141 ~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al 220 (759)
-+++|+.++++++.||+.||+++++++.|...+.. . +....++...++||+++.+|.++++++++.....+|++|+
T Consensus 9 ~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~~~~~~a~ 84 (626)
T KOG1175|consen 9 SLSSYREFYRFSVEDPERFWGEVAKELHWKFPWPR-C---NKDENKGNPFTKWFPGAFLNACYNCLDRHIKEKGGDKVAI 84 (626)
T ss_pred CHHHHHHHHhhcccCHHHHHHHhhhhhhcccCccc-c---ccccccCCCCccccccchhhhhHhhhhhhhhhcCCCCcEE
Confidence 46899999999999999999999887776665552 1 2222333445699999999999999999877445999999
Q ss_pred EEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHH
Q 004348 221 YWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRI 300 (759)
Q Consensus 221 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il 300 (759)
++....++....+||.||.+++.++|..|.+.|+++||+|+++||+.+|+++++|||.++|++++++...+++..+..+|
T Consensus 85 ~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl 164 (626)
T KOG1175|consen 85 IFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKELLDRL 164 (626)
T ss_pred EEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHHHHHH
Confidence 99977666666699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCC
Q 004348 301 MDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCE 380 (759)
Q Consensus 301 ~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (759)
++++||+|+|.+...+..+.+.++.++.+++..+..........+.+.+.. .+++|++.+.......+
T Consensus 165 ~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------------~d~~~~~~~~~a~~~~~ 232 (626)
T KOG1175|consen 165 QDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN------------RDLFWSLELKKASPEHP 232 (626)
T ss_pred HhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc------------ccccHHHHhhhcCCCCC
Confidence 999999999999999999999999999888876532222222233333221 37888888787777777
Q ss_pred ccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEE
Q 004348 381 VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (759)
Q Consensus 381 ~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl 460 (759)
+...+.+|+.+|+|||||||.|||+++++.+++...+......++++++|+++++++++|+.++++.++++|++|+++++
T Consensus 233 ~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl 312 (626)
T KOG1175|consen 233 CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVL 312 (626)
T ss_pred ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccE
Q 004348 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPI 540 (759)
Q Consensus 461 ~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l 540 (759)
+++.+. ++..+|+++++|+||++++.|+.++.|.+........+++++||++.++||++.++.++|+.+.++. .+|
T Consensus 313 ~~g~p~--~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~--~pv 388 (626)
T KOG1175|consen 313 YEGPPF--DPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGL--DPI 388 (626)
T ss_pred EcCCCC--ChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCc--cch
Confidence 998765 9999999999999999999999999999888776777777889999999999999999999999984 379
Q ss_pred eeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCC-ceEEEEEecCCC-cccccccCChhhHHhh
Q 004348 541 SDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGE-CSGYLCIKSSWP-GAFRTLYGDHERYETT 618 (759)
Q Consensus 541 ~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g-~~GEL~I~g~~~-~v~~GY~~~~e~~~~~ 618 (759)
++.||+||+|+.++...++..+.++++++.|++|+.+.|+|++|++++++ +.|+|+++.||| +++++||+|++++...
T Consensus 389 ~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~ 468 (626)
T KOG1175|consen 389 YETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAA 468 (626)
T ss_pred hhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhh
Confidence 99999999999988777665478999999999999999999999999987 899999999998 9999999999999999
Q ss_pred hcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcC
Q 004348 619 YFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 679 (759)
Q Consensus 619 ~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 679 (759)
||.+++|+|+|||.++ +|+||++.|||++|.+||.|.|++||+.+|+.++|.++|||++++
T Consensus 469 yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~ 548 (626)
T KOG1175|consen 469 YFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKS 548 (626)
T ss_pred hcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcC
Confidence 9999999999999998 899999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCCCCChhhHHHHHhhh
Q 004348 680 GVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 757 (759)
Q Consensus 680 ~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 757 (759)
+....+++.++|++++|+.+.+|+.|+.|+++++||+|+||||+|++||++.+++ +++|.+|++||++++.+++..
T Consensus 549 g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~--~~~d~st~~dp~v~~~~~~~~ 624 (626)
T KOG1175|consen 549 GSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK--AVGDTSTLADPSVIDHLRSIL 624 (626)
T ss_pred CCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC--ccccccccCChHHHHHHHHhh
Confidence 9888899999999999999999999999999999999999999999999999998 789999999999999998754
No 6
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=5.5e-87 Score=784.54 Aligned_cols=596 Identities=38% Similarity=0.695 Sum_probs=506.4
Q ss_pred HHHHHHHHHhhChHHHHHHhhcccccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEE
Q 004348 144 KYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWE 223 (759)
Q Consensus 144 ~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~ 223 (759)
+|.++++++++||+.||.++++.+.|.++|++ +++.+ ...+.+||.++.+|.++++|++++. .+|+++|+++.
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~Al~~~ 74 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARRIDWQTPPQR-ILDYS-----NPPFARWFAGGRTNLCHNALDRHLD-ERGEQLALVTV 74 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHhCCeecCCcc-cccCC-----CCCcCccCCCCEeeHHHHHHHHHhC-cCCCCeEEEEE
Confidence 48899999999999999999888999999988 65321 1124599999999999999999988 89999999986
Q ss_pred cCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhc
Q 004348 224 ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDC 303 (759)
Q Consensus 224 ~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~ 303 (759)
+.+.+..+++||+||+++++++|++|+++|+++||+|+|+++|++|+++++|||+++|++++|+++.++.+++.++++++
T Consensus 75 ~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~ 154 (628)
T TIGR02316 75 SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDA 154 (628)
T ss_pred cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhc
Confidence 54334568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCC-CCCCcc
Q 004348 304 KPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCEVE 382 (759)
Q Consensus 304 ~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 382 (759)
+|++||+++...++++.+.++..+++++.... ....++++++.... ........+.+|.+...... ...+..
T Consensus 155 ~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (628)
T TIGR02316 155 TPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ---HPPPHVLLVDRGLA----PMRLIPGRDVDYAALRTQHEDAQVPVE 227 (628)
T ss_pred CceEEEECCccccCCcccccHHHHHHHHHhcC---CCCCEEEEEeCCCC----CcCcccCccccHHHHhhccccCCCCce
Confidence 99999999888778888888888877665431 23456666654211 11112223455666544322 122333
Q ss_pred ccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 383 WVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 383 ~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
...+++++||+|||||||+||||+++|++++.+........++++++|++++.++++|+.++.+.++++|+.|+++++++
T Consensus 228 ~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~ 307 (628)
T TIGR02316 228 WLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYE 307 (628)
T ss_pred ecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeC
Confidence 45789999999999999999999999999766666666777899999999999999999998888999999999999998
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEee
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 542 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n 542 (759)
+.+..+++..++++|+++++|+++++|++++.|.+.........++++||.+++|||++++++++++.+.++ .++++
T Consensus 308 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~---~~~~~ 384 (628)
T TIGR02316 308 GLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG---KPVID 384 (628)
T ss_pred CCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHhC---CCEEe
Confidence 876677999999999999999999999999999886543344567899999999999999999999999887 68999
Q ss_pred eeccccccceecccCCCC--CCCCCCCcCCCCCCceEEEECC-CCcccCCCceEEEEEecCC-CcccccccCChhhHHhh
Q 004348 543 TWWQTETGGFMITPLPGA--WPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSW-PGAFRTLYGDHERYETT 618 (759)
Q Consensus 543 ~YG~TE~~~~~~~~~~~~--~~~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g~~-~~v~~GY~~~~e~~~~~ 618 (759)
.||+||++..++....+. ...+.+++|+|++|++++|+|+ +|++++.|+.|||+|+||+ ++++.|||++++++.+.
T Consensus 385 ~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~ 464 (628)
T TIGR02316 385 NYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKT 464 (628)
T ss_pred cccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHh
Confidence 999999986444322211 1345678999999999999998 7999999999999999976 37899999999999998
Q ss_pred hcccC-CcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEc
Q 004348 619 YFKPF-PGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLV 678 (759)
Q Consensus 619 ~~~~~-~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~ 678 (759)
|+... ++||+|||+|+ +|+||+|.|||++|.+||+|.||+|++++++..++.+++||+++
T Consensus 465 ~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~g~~~~~~vv~~ 544 (628)
T TIGR02316 465 YWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELKGQVAVVFAILK 544 (628)
T ss_pred hhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCCCeEEEEEEEEc
Confidence 87543 45999999988 89999999999999999999999999999998899999999988
Q ss_pred CCCCC-----cHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCCCCChhhHHHH
Q 004348 679 EGVPY-----SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQL 753 (759)
Q Consensus 679 ~~~~~-----~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~~~~ 753 (759)
++... .+.+.++|+++++++|++|++|+.|+++++||+|+|||++|+.|++++.+. ...+.++++||+++++|
T Consensus 545 ~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~--~~~~~~~~~~~~~~~~~ 622 (628)
T TIGR02316 545 ESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR--DPGDLTTIDDPGALEQV 622 (628)
T ss_pred CCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC--CCCCcccccCHHHHHHH
Confidence 65432 235678999999999999999999999999999999999999999998765 46789999999999999
Q ss_pred Hhhhc
Q 004348 754 IALAD 758 (759)
Q Consensus 754 ~~~~~ 758 (759)
++...
T Consensus 623 ~~~~~ 627 (628)
T TIGR02316 623 RRAME 627 (628)
T ss_pred HHHhh
Confidence 88643
No 7
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-86 Score=777.24 Aligned_cols=598 Identities=27% Similarity=0.438 Sum_probs=491.8
Q ss_pred ChhHHHHHHHHHhhChHHHHHHhhcc-cccccccccccccccccccCCCcccccCCCccccHHHHHHhhccccc--CCCe
Q 004348 141 SPQKYLEMYKRSVEDPAGFWADIASE-FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAG--LGDK 217 (759)
Q Consensus 141 ~~~~~~~ll~~~~~~p~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~--~pd~ 217 (759)
-+++|.++++++++||+.||.+++++ +.|.++|.+ +++.+ +.+++||+++++|+++++|++++. . +||+
T Consensus 6 ~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~-~~~~~------~~~~~wf~~~~~n~~~~~l~~~~~-~~~~~~~ 77 (647)
T PTZ00237 6 DPFDYENDSNYANSNPESFWDEVAKKYVHWDKMYDK-VYSGD------EIYPDWFKGGELNTCYNVLDIHVK-NPLKRDQ 77 (647)
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHhcCeeeCCccc-ccCCC------CCchhhCCCCeeeHHHHHHHHhhc-ccCCCCc
Confidence 36889999999999999999999987 789999888 65321 123599999999999999999886 4 7999
Q ss_pred EEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHH
Q 004348 218 VAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLA 297 (759)
Q Consensus 218 ~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~ 297 (759)
+|+++..+..+..+++||+||+++++++|+.|+++||++||+|+|+++|++|+++++|||+++|++++|+++.++.+++.
T Consensus 78 ~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~ 157 (647)
T PTZ00237 78 DALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLI 157 (647)
T ss_pred eEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHH
Confidence 99999754323357899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccc----cc-CCCCccchhhhc
Q 004348 298 QRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENT----KW-QDGRDIWWQDVV 372 (759)
Q Consensus 298 ~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----~~-~~~~~~~~~~~~ 372 (759)
++|++++|++||+++...++.+.+.+.+.+.+++... .....+++++........... .. .......|++++
T Consensus 158 ~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (647)
T PTZ00237 158 DRIETITPKLIITTNYGILNDEIITFTPNLKEAIELS---TFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEI 234 (647)
T ss_pred HHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcc---cCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHH
Confidence 9999999999999887777777777777776655421 012345554422110000000 00 001234566654
Q ss_pred CCC-----CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHH
Q 004348 373 PKY-----PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYV 447 (759)
Q Consensus 373 ~~~-----~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~ 447 (759)
... ..........++|+++|+|||||||+||||+++|++++..........++..++|++++.++++|+.++ ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~-~~ 313 (647)
T PTZ00237 235 KKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFH-GF 313 (647)
T ss_pred hhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeH-HH
Confidence 321 111223456789999999999999999999999999655544444556778889999999999999875 46
Q ss_pred HHHHhhcCcEEEEecCCCCCC--ChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcc---cccCCCCCeeEEEEeCCCCC
Q 004348 448 TYGPMLNGASVVVFEGAPTYP--DSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY---VTRYSRKSLRVLGSVGEPIN 522 (759)
Q Consensus 448 ~~~~L~~G~tlvl~~~~~~~~--d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~---~~~~~l~sLr~v~~gGe~l~ 522 (759)
++++|+.|++++++++.+..+ .++.+|++|++++||+++++|++++.|++...+. ....++++||.+++|||+++
T Consensus 314 ~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~ 393 (647)
T PTZ00237 314 LYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIE 393 (647)
T ss_pred HHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCC
Confidence 889999999999998743221 2789999999999999999999999998764321 23457899999999999999
Q ss_pred HHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCC
Q 004348 523 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 602 (759)
Q Consensus 523 ~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~ 602 (759)
+++++++++.+| +++++.||+||++++.+.... ......+++|+|++|++++|+|++|++++.|+.|||+|++|+|
T Consensus 394 ~~~~~~~~~~~g---~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~GEl~v~~p~~ 469 (647)
T PTZ00237 394 ESIPEYIENKLK---IKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSILSEDGKELNVNEIGEVAFKLPMP 469 (647)
T ss_pred HHHHHHHHHhcC---CCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEEECCCCCCCCCCCceEEEEeccCC
Confidence 999999999987 789999999999865543322 1122347899999999999999999999999999999999874
Q ss_pred -cccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeE
Q 004348 603 -GAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGV 662 (759)
Q Consensus 603 -~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 662 (759)
+++.|||++++++.+ +|...+|||+|||+|+ +|+||+|.|||++|.+||.|.||+|+++
T Consensus 470 p~~~~gy~~~~~~~~~-~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~ 548 (647)
T PTZ00237 470 PSFATTFYKNDEKFKQ-LFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGI 548 (647)
T ss_pred chhhCceeCCHHHHHH-HHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEee
Confidence 999999999999985 5565689999999998 8999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCC---CCc-HHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCC
Q 004348 663 EHEVKGQGIYAFVTLVEGV---PYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDEL 738 (759)
Q Consensus 663 ~~~~~~~~lva~Vv~~~~~---~~~-~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~ 738 (759)
+++..++.++|||+++++. ..+ +++.++|+++++++|++|++|+.|+++++||+|+||||+|+.|++++.+. +.
T Consensus 549 ~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~--~~ 626 (647)
T PTZ00237 549 YDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDS--NY 626 (647)
T ss_pred EcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCC--CC
Confidence 9998899999999998542 222 46678999999999999999999999999999999999999999998765 45
Q ss_pred CCCCCCCChhhHHHHHhhh
Q 004348 739 GDTSTLADPGVVDQLIALA 757 (759)
Q Consensus 739 ~~~~~~~~p~~~~~~~~~~ 757 (759)
.+++|++||++++++++..
T Consensus 627 ~~~~~~~~~~~~~~~~~~~ 645 (647)
T PTZ00237 627 QLPDNVNDSEIFYKIKELY 645 (647)
T ss_pred CCCccccCHHHHHHHHHHh
Confidence 7899999999999998754
No 8
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-85 Score=769.50 Aligned_cols=597 Identities=38% Similarity=0.691 Sum_probs=505.3
Q ss_pred hhHHHHHHHHHhhChHHHHHHhhcccccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEE
Q 004348 142 PQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIY 221 (759)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~ 221 (759)
+.+|.++++++++||+.||.++++.+.|.++|.+ +++.+ .+.+++||+++++|.++++|+++++ .+|+++|++
T Consensus 1 ~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~-~~~~~-----~~~~~~wf~~~~~n~~~~~l~~~~~-~~p~~~A~~ 73 (629)
T PRK10524 1 MMSYSEFYQRSIDDPEAFWAEQARRIDWQTPFTQ-VLDYS-----NPPFARWFVGGRTNLCHNAVDRHLA-KRPEQLALI 73 (629)
T ss_pred ChhHHHHHHHHhcCHHHHHHHHHHhCCcccCchh-hccCC-----CCCcCccCCCcEeeHHHHHHHHhhc-cCCCCeEEE
Confidence 3579999999999999999999888999999988 75321 1124599999999999999999988 899999999
Q ss_pred EEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 004348 222 WEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIM 301 (759)
Q Consensus 222 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~ 301 (759)
+.+.+.+..+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.++|+
T Consensus 74 ~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~ 153 (629)
T PRK10524 74 AVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARID 153 (629)
T ss_pred EEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 86533344689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCC-CCCC
Q 004348 302 DCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-TKCE 380 (759)
Q Consensus 302 ~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 380 (759)
+++++++|+++...++++.+.+++.+.+++.... .....+++++.... ........+..|.+...... ...+
T Consensus 154 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (629)
T PRK10524 154 DAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQ---HKPRHVLLVDRGLA----PMARVAGRDVDYATLRAQHLGARVP 226 (629)
T ss_pred hcCCcEEEEccCcccCCcccccHHHHHHHHHhcC---CCCCEEEEEeCCCC----CcCcccCCcccHHHHHhcCCCCCCC
Confidence 9999999999888788888888887777665431 23455666543211 11112223445655443321 1222
Q ss_pred ccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEE
Q 004348 381 VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (759)
Q Consensus 381 ~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl 460 (759)
.....+++++||+|||||||.||||+++|++++..........++++++|++++.++++|+.++.+.++.+|++|+++++
T Consensus 227 ~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~ 306 (629)
T PRK10524 227 VEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIM 306 (629)
T ss_pred ceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEE
Confidence 33456899999999999999999999999997766666666678999999999999999999988889999999999999
Q ss_pred ecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccE
Q 004348 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPI 540 (759)
Q Consensus 461 ~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l 540 (759)
+++.+..+++..++++|+++++|+++++|++++.|.+.........++++||.+++|||++++++++++.+.++ +++
T Consensus 307 ~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~---~~v 383 (629)
T PRK10524 307 YEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEALG---VPV 383 (629)
T ss_pred ECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhcC---CCe
Confidence 98877677999999999999999999999999999876543334567899999999999999999999999887 789
Q ss_pred eeeeccccccceecccCCC--CCCCCCCCcCCCCCCceEEEECC-CCcccCCCceEEEEEecCCC-cccccccCChhhHH
Q 004348 541 SDTWWQTETGGFMITPLPG--AWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWP-GAFRTLYGDHERYE 616 (759)
Q Consensus 541 ~n~YG~TE~~~~~~~~~~~--~~~~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g~~~-~v~~GY~~~~e~~~ 616 (759)
++.||+||++..++..... ....+++++|+|++|++++|+|+ +|++++.|+.|||+|+||++ +++.|||++++++.
T Consensus 384 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~ 463 (629)
T PRK10524 384 IDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFV 463 (629)
T ss_pred EeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHH
Confidence 9999999998533322221 12345678999999999999999 99999999999999999763 78999999999999
Q ss_pred hhhcccC-CcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEE
Q 004348 617 TTYFKPF-PGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVT 676 (759)
Q Consensus 617 ~~~~~~~-~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv 676 (759)
+.||... +|||+|||+|+ +|+||+|.|||++|.+||+|.+|+|++++++..++.+++||+
T Consensus 464 ~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~g~~~~~~vv 543 (629)
T PRK10524 464 KTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALKGQVAVAFVV 543 (629)
T ss_pred HhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCCCeEEEEEEE
Confidence 9887543 47999999987 899999999999999999999999999999888999999999
Q ss_pred EcCCCCC-----cHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCCCCChhhHH
Q 004348 677 LVEGVPY-----SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVD 751 (759)
Q Consensus 677 ~~~~~~~-----~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~~ 751 (759)
++++... .+.+.++|+++++++|++|++|..|+++++||+|+|||++|+.|++++.++ ...+.++++||++++
T Consensus 544 ~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~--~~~~~~~~~~~~~~~ 621 (629)
T PRK10524 544 PKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR--DPGDLTTIEDPAALQ 621 (629)
T ss_pred ECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC--CCCCcccccCHHHHH
Confidence 9865432 235678999999999999999999999999999999999999999998764 467899999999999
Q ss_pred HHHhhh
Q 004348 752 QLIALA 757 (759)
Q Consensus 752 ~~~~~~ 757 (759)
+|++..
T Consensus 622 ~~~~~~ 627 (629)
T PRK10524 622 QIRQAL 627 (629)
T ss_pred HHHHHh
Confidence 998753
No 9
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=7.3e-84 Score=759.64 Aligned_cols=591 Identities=23% Similarity=0.413 Sum_probs=495.2
Q ss_pred hhHHHHHHHHHhhChHHHHHHhhcc--cccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEE
Q 004348 142 PQKYLEMYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVA 219 (759)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~A 219 (759)
+..|.++++++++||+.||.++++. +.|..+|.+ +++... +.+++||.++++|.+.+++++ +++++|
T Consensus 34 ~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~wf~~~~~n~~~~~~~~-----~~~~~a 102 (652)
T TIGR01217 34 EGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCAR-VVDDRT-----MPGAQWFPGARLNYAENLLRA-----AGTEPA 102 (652)
T ss_pred hhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCce-eeeCCC-----CCCCEECCCCeeeHHHHHhcc-----CCCCeE
Confidence 4789999999999999999999876 889999888 653211 123599999999999999973 457899
Q ss_pred EEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHH
Q 004348 220 IYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQR 299 (759)
Q Consensus 220 l~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~i 299 (759)
+++.++. +..+++||+||.++++++|+.|+++|+++||+|+|+++|++|+++++|||+++|++++|++|.++.+++.++
T Consensus 103 ~~~~~~~-~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~ 181 (652)
T TIGR01217 103 LLYVDET-HEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGARGVLDR 181 (652)
T ss_pred EEEECCC-CCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHH
Confidence 9997543 345789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCC-CCC
Q 004348 300 IMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTK 378 (759)
Q Consensus 300 l~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 378 (759)
|++++|++||+++...++++.+.+.+.+.++...+ +.++.++++........ ... ......+|++++... ...
T Consensus 182 l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~ 255 (652)
T TIGR01217 182 FQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKEL----PTLRAVVHIPYLGPRET-EAP-KIDGALDLEDFTAAAQAAE 255 (652)
T ss_pred HHhcCCcEEEEccccccCCcccchHHHHHHHHhcC----CCccEEEEEeCCCCccc-ccc-cccCcccHHHHHhcccCCC
Confidence 99999999999998888888888888877766554 55666666543211000 000 011245566665432 112
Q ss_pred CCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEE
Q 004348 379 CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASV 458 (759)
Q Consensus 379 ~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tl 458 (759)
.......++++++|+|||||||.||||+++|++++.+........++++++|+++++++++|+++ .+ ++.+|+.|+++
T Consensus 256 ~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~-~~~~l~~G~t~ 333 (652)
T TIGR01217 256 LVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-NW-LVSGLATGATL 333 (652)
T ss_pred CCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-HH-HHHHHhcCcEE
Confidence 22334567999999999999999999999999977666666666789999999999999999864 33 56899999999
Q ss_pred EEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCc
Q 004348 459 VVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (759)
Q Consensus 459 vl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (759)
+++++.+.++++..++++++++++|++.++|++++.|.+.........++++||.+++|||++++++++++.+.++. ++
T Consensus 334 vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~-~~ 412 (652)
T TIGR01217 334 VLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKA-DV 412 (652)
T ss_pred EEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHHHhCC-Cc
Confidence 99987766678999999999999999999999998887653322345678999999999999999999999998874 46
Q ss_pred cEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChh--hHH
Q 004348 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHE--RYE 616 (759)
Q Consensus 539 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e--~~~ 616 (759)
.+.+.||+||+++......+ ..+...+++|.|.+|++++|+|++|++++ |+.|||+|+||+|+++.|||++++ ++.
T Consensus 413 ~~~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~v~ivd~~g~~~~-g~~GEl~v~gp~p~~~~gy~~~~~~t~~~ 490 (652)
T TIGR01217 413 WLASISGGTDICSCFAGANP-TLPVHIGEIQAPGLGTAVQSWDPEGKPVT-GEVGELVCTNPMPSMPIRFWNDPDGSKYR 490 (652)
T ss_pred eEEeccCHHHHhccccCCCC-CCCCcCCccCCCcCCCceEEECCCCCCCC-CCccEEEEecCCCccccceeCCCccchhH
Confidence 78899999997543332211 12345678999999999999999999994 899999999988899999999997 455
Q ss_pred hhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEE
Q 004348 617 TTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 677 (759)
Q Consensus 617 ~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 677 (759)
+.||..++|||+|||+|+ +|+||+|.|||++|.+||+|.||+|++++++..++.++|||++
T Consensus 491 ~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~~ge~~~afVv~ 570 (652)
T TIGR01217 491 DAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPDGGYRVVLFVHL 570 (652)
T ss_pred HhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCCCCEEEEEEEEE
Confidence 677777789999999998 8999999999999999999999999999999889999999999
Q ss_pred cCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCCCCCCChhhHHHHHhhh
Q 004348 678 VEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPGVVDQLIALA 757 (759)
Q Consensus 678 ~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 757 (759)
+++...++++.++|+++++++|++|++|+.|+++++||+|+||||+|+.|++++.++ +..+.++++||+++++|++++
T Consensus 571 ~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 648 (652)
T TIGR01217 571 APGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQGT--PVDNPGAIDNPELLDLYEELA 648 (652)
T ss_pred CCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcCC--CCCCcccccCHHHHHHHHHHH
Confidence 887766677788999999999999999999999999999999999999999998764 467899999999999998864
No 10
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-83 Score=756.05 Aligned_cols=593 Identities=27% Similarity=0.450 Sum_probs=498.1
Q ss_pred hhHHHHHHHHHhhChHHHHHHhhcc--cccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEE
Q 004348 142 PQKYLEMYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVA 219 (759)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~A 219 (759)
+..|.++++++++||+.||.++++. +.|..+|.. +++. ... .+++||.++++|.+++++++ .+|+++|
T Consensus 33 ~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~-~~~~-~~~----~~~~wf~~~~~n~~~~~~~~----~~~~~~A 102 (655)
T PRK03584 33 FDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTV-VLAG-RRM----PGARWFPGARLNYAENLLRH----RRDDRPA 102 (655)
T ss_pred hHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcE-eecC-CCC----CCCeeCCCCEeeHHHHhhcc----CCCCCeE
Confidence 4789999999999999999999765 788888877 5421 111 13599999999999999874 4799999
Q ss_pred EEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHH
Q 004348 220 IYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQR 299 (759)
Q Consensus 220 l~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~i 299 (759)
+++.++. +..+++||+||.++++++|+.|+++|+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++
T Consensus 103 l~~~~~~-~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~ 181 (655)
T PRK03584 103 IIFRGED-GPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGVQGVLDR 181 (655)
T ss_pred EEEECCC-CceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHH
Confidence 9987543 446789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCC-CCC
Q 004348 300 IMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTK 378 (759)
Q Consensus 300 l~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 378 (759)
|++++++++|+++....+.+.+.....+.+....+ +.+..+++++.... ............|++.+... ...
T Consensus 182 l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 254 (655)
T PRK03584 182 FGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAAL----PSLEHVVVVPYLGP---AAAAAALPGALLWEDFLAPAEAAE 254 (655)
T ss_pred HHHcCCcEEEEccccccCCcccchHHHHHHHHhcC----CCccEEEEEecCCC---cccccccCCcccHHHHhhccccCC
Confidence 99999999999988877777777777776665544 45566666543210 00011122345576665421 122
Q ss_pred CCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEE
Q 004348 379 CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASV 458 (759)
Q Consensus 379 ~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tl 458 (759)
.......+++++||+|||||||.||||+++|++++.+........+++.++|+++++++++|+.+. .++++|+.|+++
T Consensus 255 ~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~ 332 (655)
T PRK03584 255 LEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATL 332 (655)
T ss_pred CCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEE
Confidence 233456789999999999999999999999999776666666777899999999999999998653 367899999999
Q ss_pred EEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCc
Q 004348 459 VVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (759)
Q Consensus 459 vl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (759)
+++++.+..+++..++++|+++++|++.++|++++.|.+.........++++||.+++|||++++++++++.+.++. ++
T Consensus 333 vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~-~~ 411 (655)
T PRK03584 333 VLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKA-DV 411 (655)
T ss_pred EEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHHHhCC-Cc
Confidence 99988776779999999999999999999999999998754332344678999999999999999999999999864 48
Q ss_pred cEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChh--hHH
Q 004348 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHE--RYE 616 (759)
Q Consensus 539 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e--~~~ 616 (759)
++.+.||+||+++......+ ..+.+++++|.|++|++++|+|++|+++ .|+.|||+|+||+|+++.|||++++ ++.
T Consensus 412 ~~~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~ 489 (655)
T PRK03584 412 WLASISGGTDICSCFVGGNP-LLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYR 489 (655)
T ss_pred eEEeccChHhhhcccccCCC-CCCcCCCccCCCcCCceeEEECCCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHH
Confidence 89999999998654332221 1235678899999999999999999999 7899999999988899999999997 556
Q ss_pred hhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEE
Q 004348 617 TTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 677 (759)
Q Consensus 617 ~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 677 (759)
..||..++|||+|||+|+ +|+||+|.|||++|.+||.|.+|+|++++++..++.+++||++
T Consensus 490 ~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~~g~~~~a~vv~ 569 (655)
T PRK03584 490 DAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPDGDVRMPLFVVL 569 (655)
T ss_pred HhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCCCCEEEEEEEEE
Confidence 777777789999999998 8999999999999999999999999999998889999999999
Q ss_pred cCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc-CCCCCCCCCCChhhHHHHHhh
Q 004348 678 VEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL-DELGDTSTLADPGVVDQLIAL 756 (759)
Q Consensus 678 ~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~ 756 (759)
+++...++++.++|+++|+++|++|++|+.|+++++||+|+||||+|+.|++++.+.. ..+.+.++++||++++.|++.
T Consensus 570 ~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (655)
T PRK03584 570 AEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGRPVKKAVNRDALANPEALDWFADL 649 (655)
T ss_pred CCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCCCCCCCCCcccccCHHHHHHHHHH
Confidence 8876656667789999999999999999999999999999999999999999987652 223489999999999999886
Q ss_pred h
Q 004348 757 A 757 (759)
Q Consensus 757 ~ 757 (759)
+
T Consensus 650 ~ 650 (655)
T PRK03584 650 A 650 (655)
T ss_pred H
Confidence 4
No 11
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.1e-78 Score=719.41 Aligned_cols=563 Identities=25% Similarity=0.387 Sum_probs=458.1
Q ss_pred hhHHHHHHHHHhhChHHHHHHhhcc--ccccccccccccccc-ccccCCCcccccCCCccccHHHHHHhhcccccCCCeE
Q 004348 142 PQKYLEMYKRSVEDPAGFWADIASE--FYWKEKWGQRVCSEN-LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKV 218 (759)
Q Consensus 142 ~~~~~~ll~~~~~~p~~~~~~l~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~ 218 (759)
+.+|..+++++++||+.||.++++. +.|.+++.+ +++.. ..+ ...+||+++++|.++++|+++++ .+||++
T Consensus 119 ~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~-v~~~~~~~~----~~~~wf~g~~ln~~~~~l~~~~~-~~pd~~ 192 (728)
T PLN03052 119 ISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRC-ILDTSDESN----PGGQWLPGAVLNVAECCLTPKPS-KTDDSI 192 (728)
T ss_pred hhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCce-eecCCCCCC----CCCEECCCCEeEHHHHHHHHHhc-cCCCCe
Confidence 4789999999999999999999875 578888887 66321 122 12489999999999999999877 799999
Q ss_pred EEEEEcCC--CCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHH
Q 004348 219 AIYWEAND--PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSL 296 (759)
Q Consensus 219 Al~~~~~~--~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l 296 (759)
|+++.++. ++..+++||+||+++++++|+.|+++|+++||+|+++++|++|+++++|||+++|++++|++|+++.+++
T Consensus 193 Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l 272 (728)
T PLN03052 193 AIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGCVVVSIADSFAPSEI 272 (728)
T ss_pred EEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHH
Confidence 99998542 1134689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCC
Q 004348 297 AQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP 376 (759)
Q Consensus 297 ~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (759)
.+++++++|++||+++...++++.+.+...+.+... ..++++....... .. .....+..|++++....
T Consensus 273 ~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~---------~~~iv~~~~~~~~--~~-~~~~~~~~~~~~~~~~~ 340 (728)
T PLN03052 273 ATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKA---------PKAIVLPADGKSV--RV-KLREGDMSWDDFLARAN 340 (728)
T ss_pred HHHHHhcCceEEEEcCccccCCcccchHHHHHHhcC---------CcEEEEeCCCCcc--cc-ccccCCccHHHHHhccc
Confidence 999999999999999888777777776555443221 1234333221000 00 00113456776654321
Q ss_pred -----CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHH
Q 004348 377 -----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGP 451 (759)
Q Consensus 377 -----~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~ 451 (759)
...+.....+++++||+|||||||+||||+++|++++.. .......++++++|+++++++++|+++. +.++++
T Consensus 341 ~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~-~~~~~~~~~l~~~d~~~~~~~l~w~~g~-~~v~~~ 418 (728)
T PLN03052 341 GLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRA-AADAWAHLDIRKGDIVCWPTNLGWMMGP-WLVYAS 418 (728)
T ss_pred cccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHH-HHHHHHhcCCCCCcEEEECCCcHHHhHH-HHHHHH
Confidence 111222335789999999999999999999999985443 3334445789999999999999999995 678899
Q ss_pred hhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHH
Q 004348 452 MLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFN 531 (759)
Q Consensus 452 L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~ 531 (759)
|++|++++++++. +++..+++++++++||++.++|++++.|.+... ....++++||.+++|||+++++.+.|+.+
T Consensus 419 L~~Gat~vl~~g~---p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~--~~~~dlssLr~i~s~Ge~l~~~~~~~~~~ 493 (728)
T PLN03052 419 LLNGATLALYNGS---PLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNC--MAGLDWSSIRCFGSTGEASSVDDYLWLMS 493 (728)
T ss_pred HHhCCEEEEeCCC---CCCChHHHHHHHHCCCEEEECHHHHHHHHhcCC--cccCChhheeEEEecCCCCCHHHHHHHHH
Confidence 9999999999875 355679999999999999999999999987653 24568899999999999999999999998
Q ss_pred HhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCc--eEEEEEecCCCccccccc
Q 004348 532 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGEC--SGYLCIKSSWPGAFRTLY 609 (759)
Q Consensus 532 ~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~--~GEL~I~g~~~~v~~GY~ 609 (759)
.++. .+++|.||+||+++..+...+ ..+..++++|+|++|++++|+|++|++++.|+ .|||+|++++++...+|+
T Consensus 494 ~~~~--~~i~~~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~ 570 (728)
T PLN03052 494 RAGY--KPIIEYCGGTELGGGFVTGSL-LQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALFPLMFGASSTLL 570 (728)
T ss_pred hcCC--CCeEeeccChhhCcccccCCC-CCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEeCCCCCCCcccc
Confidence 8762 579999999999865443222 12345688999999999999999999999985 599999987677788999
Q ss_pred CChhhHHhhhcccCC---c--EEEeCCeee-------------------ccEeeCHHHHHHHHh-cCCccceEEEEeEec
Q 004348 610 GDHERYETTYFKPFP---G--YYFTGDGCS-------------------SGHRIGTAEVESALV-SHPQCAEAAVVGVEH 664 (759)
Q Consensus 610 ~~~e~~~~~~~~~~~---g--~y~TGDl~~-------------------~G~rI~~~eIE~~L~-~~p~V~ea~Vv~~~~ 664 (759)
++. ....||..++ | ||+|||+++ +|+||+|.|||++|. .||.|.||+|+++++
T Consensus 571 ~~~--~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d 648 (728)
T PLN03052 571 NAD--HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPP 648 (728)
T ss_pred Cch--hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeec
Confidence 874 3355664322 4 999999988 899999999999995 899999999999999
Q ss_pred CCCC-eEEEEEEEEc--CCCCCc-HHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 665 EVKG-QGIYAFVTLV--EGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 665 ~~~~-~~lva~Vv~~--~~~~~~-~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
+..+ +.+++||+++ ++...+ +++.+.|+++|+++|+++++|+.|+++++||+|+||||+|+.|++.+...
T Consensus 649 ~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~~ 722 (728)
T PLN03052 649 PGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQE 722 (728)
T ss_pred CCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHhh
Confidence 8665 8999999997 554433 67888899999999999999999999999999999999999999988654
No 12
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2e-74 Score=782.54 Aligned_cols=556 Identities=19% Similarity=0.237 Sum_probs=457.2
Q ss_pred CCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhcccccccccccccc-cc
Q 004348 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-SE 180 (759)
Q Consensus 102 ~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~~ 180 (759)
...++|||++.+.. .+++.+.++|++++|+++++++++++|..+|++++++|++.++++.. +.. .+... ++ .+
T Consensus 3011 ~~~~~~~l~l~~~~---~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~-l~~-~~~~~-~~~~~ 3084 (3956)
T PRK12467 3011 REQTNYPLTLAVGL---GDTLELEFSYDRQHFDAAAIERLAESFDRLLQAMLNNPAARLGELPT-LAA-HERRQ-VLHAW 3084 (3956)
T ss_pred cccccCceEEEecc---CcceeEEEEechhhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccC-CCH-HHHHH-HHHhh
Confidence 34578999988764 24688899999999999999999999999999999999999998852 111 11111 11 11
Q ss_pred cccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEE
Q 004348 181 NLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAV 260 (759)
Q Consensus 181 ~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V 260 (759)
+.... .+ ....+++++|+++++ ++||++|+++. ++++||+||+++++++|+.|+++|+++|++|
T Consensus 3085 ~~~~~------~~---~~~~~~~~l~~~~a~-~~p~~~Av~~~------~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V 3148 (3956)
T PRK12467 3085 NATAA------AY---PSERLVHQLIEAQVA-RTPEAPALVFG------DQQLSYAELNRRANRLAHRLIAIGVGPDVLV 3148 (3956)
T ss_pred ccCCC------CC---CccccHHHHHHHHHH-hCCCcceEeeC------CcccCHHHHHHHHHHHHHHHHHcCCCCCCeE
Confidence 11100 00 112378999999999 89999999987 6789999999999999999999999999999
Q ss_pred EEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCC
Q 004348 261 IIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGIS 340 (759)
Q Consensus 261 ai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 340 (759)
+|+++|++++++++|||+|+|++|+||||.+|.+|+.+++++++++++|++...... +.. ..
T Consensus 3149 ~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~-------------~~~-----~~ 3210 (3956)
T PRK12467 3149 GVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQ-------------LPA-----PA 3210 (3956)
T ss_pred EEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhh-------------ccc-----cc
Confidence 999999999999999999999999999999999999999999999999997653210 000 00
Q ss_pred ccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHH
Q 004348 341 VDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (759)
Q Consensus 341 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~ 420 (759)
...++.++... + .......+.....++++|||+|||||||+||||+++|++ +.+...+.
T Consensus 3211 ~~~~~~~~~~~----------------~----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~-l~~~~~~~ 3269 (3956)
T PRK12467 3211 GDTALTLDRLD----------------L----NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGA-LANHLCWI 3269 (3956)
T ss_pred CCceeeecchh----------------h----cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHH-HHHHHHHH
Confidence 11122222110 0 001112222345789999999999999999999999999 55666677
Q ss_pred HHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCC
Q 004348 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (759)
Q Consensus 421 ~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~ 500 (759)
...++++++|++++++|++|+.+ +++++.+|+.|+++++.++ ...++..+++.|++++||++.++|++++.|++...
T Consensus 3270 ~~~~~~~~~d~~l~~~~~~fd~~-~~~~~~~L~~G~~l~i~~~--~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~ 3346 (3956)
T PRK12467 3270 AEAYELDANDRVLLFMSFSFDGA-QERFLWTLICGGCLVVRDN--DLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG 3346 (3956)
T ss_pred HHhcCCCcCCEEEEecCccHhHH-HHHHHHHHhCCCEEEECCc--ccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc
Confidence 77899999999999999999988 6899999999999999872 23489999999999999999999999999987532
Q ss_pred cccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC---CCCCCCCcCCCCCCceE
Q 004348 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQP 577 (759)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~---~~~~~~~iG~p~~g~~~ 577 (759)
..++++||.+++|||+++++++++|.+.++ +++++|.||+||+++.++...... ......++|+|++|+++
T Consensus 3347 ----~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 3420 (3956)
T PRK12467 3347 ----GADCASLDIYVFGGEAVPPAAFEQVKRKLK--PRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSI 3420 (3956)
T ss_pred ----ccCCCCceEEEEecCCCCHHHHHHHHHhCC--CCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEE
Confidence 236789999999999999999999998876 488999999999987665422111 11234689999999999
Q ss_pred EEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhccc-----CCcEEEeCCeee------------------
Q 004348 578 VIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCS------------------ 634 (759)
Q Consensus 578 ~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~-----~~g~y~TGDl~~------------------ 634 (759)
+|+|++++++|.|+.|||+|+| +++++||+|+|+.|.+.|..+ ..+||||||+|+
T Consensus 3421 ~v~d~~~~~vp~G~~GEL~i~G--~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~ik 3498 (3956)
T PRK12467 3421 YVLDGQLNPVPVGVAGELYIGG--VGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVK 3498 (3956)
T ss_pred EEECCCCCCCCCCCCceEEEcc--hhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEe
Confidence 9999999999999999999999 999999999999999888642 235999999998
Q ss_pred -ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCC
Q 004348 635 -SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPG 713 (759)
Q Consensus 635 -~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~ 713 (759)
+|+||+|+|||++|.+||+|.+|+|++..+ ..++.++|||++...... ..++|+++++++||.||+|..|+++++
T Consensus 3499 i~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~~~~~---~~~~l~~~l~~~Lp~y~vP~~~~~l~~ 3574 (3956)
T PRK12467 3499 IRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPADPQGD---WRETLRDHLAASLPDYMVPAQLLVLAA 3574 (3956)
T ss_pred eceEeecHHHHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCCCCcc---cHHHHHHHHhccCChhhCCCeeeeecc
Confidence 999999999999999999999999998754 467899999998765332 267899999999999999999999999
Q ss_pred CCCCCCCcccHHHHHHHHhc
Q 004348 714 LPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 714 lP~T~~GKvdR~~L~~~~~~ 733 (759)
||+|+||||||++|++....
T Consensus 3575 lP~t~~GKidR~~L~~~~~~ 3594 (3956)
T PRK12467 3575 MPLGPNGKVDRKALPDPDAK 3594 (3956)
T ss_pred CCCCCCCccchhhcCCCCcc
Confidence 99999999999999987543
No 13
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.6e-74 Score=779.96 Aligned_cols=566 Identities=18% Similarity=0.237 Sum_probs=460.9
Q ss_pred CCCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhccccccccccccccc-
Q 004348 101 PSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCS- 179 (759)
Q Consensus 101 ~~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~- 179 (759)
...+++|||++.+.+. ++++...++|++++|+++++++++++|..+|++++++|+..++++.. ....+... ++.
T Consensus 1488 ~~~~~~~dL~l~v~~~--~~~l~l~~~y~~~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~--~~~~~~~~-~~~~ 1562 (3956)
T PRK12467 1488 ESQTAQFDLTLDTYES--SEGLQASLTYATDLFEASTIERLAGHWLNLLQGLVADPERRLGELDL--LDEAERRQ-ILEG 1562 (3956)
T ss_pred CCcccccceEEEEEec--CCeEEEEEEEeCCcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccc--cchHHhhh-hHHh
Confidence 3567899999988744 36788899999999999999999999999999999999999988742 11111111 111
Q ss_pred ccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004348 180 ENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 259 (759)
Q Consensus 180 ~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~ 259 (759)
++... .+++. ..+++++|+++++ .+||++|+++. ++.+||+||+++++++|++|+++|+++|++
T Consensus 1563 ~~~~~-------~~~~~--~~~~~~~~~~~a~-~~p~~~Av~~~------~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~ 1626 (3956)
T PRK12467 1563 WNATH-------TGYPL--ARLVHQLIEDQAA-ATPEAVALVFG------EQELTYGELNRRANRLAHRLIALGVGPEVL 1626 (3956)
T ss_pred hcCCc-------cCCCc--cccHHHHHHHHHH-hCCCCeEEEeC------CcEEeHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 11110 11111 1368999999999 89999999986 678999999999999999999999999999
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCC
Q 004348 260 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 339 (759)
Q Consensus 260 Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 339 (759)
|+|+++|++++++++|||+|+|++|+||||.+|.+|+.+++++++++++|++...... +... .
T Consensus 1627 V~l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~-------------~~~~----~ 1689 (3956)
T PRK12467 1627 VGIAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQAR-------------LPLP----D 1689 (3956)
T ss_pred EEEEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhh-------------Cccc----c
Confidence 9999999999999999999999999999999999999999999999999997653210 0000 0
Q ss_pred CccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHH
Q 004348 340 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 419 (759)
Q Consensus 340 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~ 419 (759)
.. .++.++... +.........+.....++++|||+|||||||+||||+++|++ +.+...+
T Consensus 1690 ~~-~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~-l~~~~~~ 1749 (3956)
T PRK12467 1690 GL-RSLVLDQED------------------DWLEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGA-LVNRLCA 1749 (3956)
T ss_pred CC-cEEEecccc------------------chhccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHH-HHHHHHH
Confidence 11 122222110 000111112222345689999999999999999999999999 5566666
Q ss_pred HHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcC
Q 004348 420 FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG 499 (759)
Q Consensus 420 ~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~ 499 (759)
....++++++|++++++|++|+.+ ++++|.+|++|+++++.+.... .++..+++.|++++||++.++|++++.|.+..
T Consensus 1750 ~~~~~~~~~~d~~l~~~~~~fd~~-~~~~~~~L~~G~~lvi~~~~~~-~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~ 1827 (3956)
T PRK12467 1750 TQEAYQLSAADVVLQFTSFAFDVS-VWELFWPLINGARLVIAPPGAH-RDPEQLIQLIERQQVTTLHFVPSMLQQLLQMD 1827 (3956)
T ss_pred HHHhcCCCcccEEEEecCccHHHH-HHHHHHHHhCCCEEEEcChhhc-CCHHHHHHHHHHcCCeEEECCHHHHHHHHhhc
Confidence 777899999999999999999998 6899999999999999876433 48999999999999999999999999998742
Q ss_pred CcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC---CCCCCCCCcCCCCCCce
Q 004348 500 NEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG---AWPQKPGSATFPFFGVQ 576 (759)
Q Consensus 500 ~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~~iG~p~~g~~ 576 (759)
. ...++++||.+++|||+++++++++|.+.++ +++++|.||+||+++.++..... .......++|+|++|++
T Consensus 1828 ~---~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~ 1902 (3956)
T PRK12467 1828 E---QVEHPLSLRRVVCGGEALEVEALRPWLERLP--DTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLS 1902 (3956)
T ss_pred c---ccccCCCceEEEEccccCCHHHHHHHHHhCC--CCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCE
Confidence 2 2235789999999999999999999999887 47899999999999766543211 11123578999999999
Q ss_pred EEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhccc-----CCcEEEeCCeee-----------------
Q 004348 577 PVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCS----------------- 634 (759)
Q Consensus 577 ~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~-----~~g~y~TGDl~~----------------- 634 (759)
++|+|++++++|.|+.|||+|+| +++++||+|+|+.+.+.|... ..+||+|||+|+
T Consensus 1903 ~~vld~~~~~vp~G~~GEl~i~G--~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qV 1980 (3956)
T PRK12467 1903 TYILDASLNPVPIGVAGELYLGG--VGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQV 1980 (3956)
T ss_pred EEEECCCCCCCCCCCceEEEecc--ccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceE
Confidence 99999999999999999999999 999999999999999888532 235999999998
Q ss_pred --ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCc-----HHHHHHHHHHHHhhcCCCccccE
Q 004348 635 --SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS-----EELRKSLVLAVRKQIGAFAAPDK 707 (759)
Q Consensus 635 --~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~-----~~l~~~l~~~l~~~Lp~~~vP~~ 707 (759)
+|+||+|+|||++|.+||+|.+|+|++.+ ...++.++|||+..++.... ....++|+++++++||.||+|+.
T Consensus 1981 ki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~ 2059 (3956)
T PRK12467 1981 KIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAH 2059 (3956)
T ss_pred EeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchh
Confidence 99999999999999999999999999886 44678899999986543211 11357899999999999999999
Q ss_pred EEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 708 IHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 708 iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
|+++++||+|+||||||++|++.....
T Consensus 2060 ~~~l~~lP~t~~GKidr~~L~~~~~~~ 2086 (3956)
T PRK12467 2060 LVFLARMPLTPNGKLDRKALPAPDASE 2086 (3956)
T ss_pred hhhhhcCCCCCCCCcchhhCCCCcccc
Confidence 999999999999999999998765443
No 14
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4.3e-73 Score=723.02 Aligned_cols=590 Identities=18% Similarity=0.192 Sum_probs=453.1
Q ss_pred CCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhccccccccccccccccc
Q 004348 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSEN 181 (759)
Q Consensus 102 ~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 181 (759)
...++|||++.+.+ .++++...++|++++|+++++++++++|..+|++++++|++++.++.. +. ..+.. .+...
T Consensus 152 ~~~~~~dl~~~v~~--~~~~l~l~~~y~~~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~-~~-~~~~~--~~~~~ 225 (1389)
T TIGR03443 152 STGSTTDLTVFLTP--SSPELELSIYYNSLLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSL-IT-PSQKS--LLPDP 225 (1389)
T ss_pred ccCCccceEEEEEe--cCCcEEEEEEEchhcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccC-CC-HHHHh--hhhcc
Confidence 35678999988774 447788999999999999999999999999999999999999988742 11 11100 11000
Q ss_pred ccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCC---CCcceeeeHHHHHHHHHHHHHHHHHcCCCCCC
Q 004348 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGD 258 (759)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~---~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd 258 (759)
.. ...|.. ...+++++|+++++ .+||++|+++.... ....+++||+||+++++++|++|++.|+++||
T Consensus 226 ---~~---~~~~~~--~~~~l~~~~~~~a~-~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~ 296 (1389)
T TIGR03443 226 ---TK---DLDWSG--FRGAIHDIFADNAE-KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGD 296 (1389)
T ss_pred ---cc---ccCcCc--ccCcHHHHHHHHHH-hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 00 013421 12368999999999 89999999864211 02357899999999999999999999999999
Q ss_pred EEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcC
Q 004348 259 AVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSG 338 (759)
Q Consensus 259 ~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 338 (759)
+|+|+++|++++++++|||+++|++++|++|.+|.+++.+++++++++++|+...... +...+...........
T Consensus 297 ~V~i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~------~~~~~~~~~~~~~~~~ 370 (1389)
T TIGR03443 297 VVMIYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGT------LDQLVRDYIDKELELR 370 (1389)
T ss_pred EEEEEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccc------cchhhhhhhhcccccc
Confidence 9999999999999999999999999999999999999999999999999998764211 0111111111000000
Q ss_pred CCccEEEEeccCccccccccccCCCCccchhhhcCCC---CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHH
Q 004348 339 ISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY---PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH 415 (759)
Q Consensus 339 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~ 415 (759)
..+..+ .+....... . ... ...+.+..... ..........+++++||+|||||||+||||+++|++ +.+
T Consensus 371 ~~~~~~-~~~~~~~~~--~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~-l~~ 442 (1389)
T TIGR03443 371 TEIPAL-ALQDDGSLV--G-GSL---EGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFS-LAY 442 (1389)
T ss_pred cccceE-Eeccccccc--c-ccc---ccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHH-HHH
Confidence 011111 111100000 0 000 00000000000 001111234688999999999999999999999999 455
Q ss_pred HHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 416 TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 416 ~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
...+....+++.++|++++.++++|+.+ .+++|.+|+.|+++++.+.. ...++..+++.|++++||+++++|++++.|
T Consensus 443 ~~~~~~~~~~~~~~d~~~~~~~~~~d~~-~~~i~~~L~~G~~l~~~~~~-~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l 520 (1389)
T TIGR03443 443 YFPWMAKRFGLSENDKFTMLSGIAHDPI-QRDMFTPLFLGAQLLVPTAD-DIGTPGRLAEWMAKYGATVTHLTPAMGQLL 520 (1389)
T ss_pred HHHHHHHhcCCCCCCEEEEecCceecch-HHHHHHHHhCCCEEEEcChh-hccCHHHHHHHHHHhCCeEEEeCHHHHHHH
Confidence 5666777889999999999999999987 57899999999999997653 234788999999999999999999999998
Q ss_pred HhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC-CC--------CCCCC
Q 004348 496 MRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-AW--------PQKPG 566 (759)
Q Consensus 496 ~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~-~~--------~~~~~ 566 (759)
..... ..+++||.+++|||++++.+.+++.+..+ +++++|.||+||++.+++..... .. .....
T Consensus 521 ~~~~~-----~~~~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (1389)
T TIGR03443 521 SAQAT-----TPIPSLHHAFFVGDILTKRDCLRLQTLAE--NVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVM 593 (1389)
T ss_pred Hhccc-----ccCCCccEEEEecccCCHHHHHHHHHhCC--CCEEEECccCCccceeEEEEEccccccccchhhcccCcC
Confidence 75432 25789999999999999999999888765 58999999999998765432111 00 11346
Q ss_pred CcCCCCCCceEEEECCC--CcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc-----------------------
Q 004348 567 SATFPFFGVQPVIVDEK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----------------------- 621 (759)
Q Consensus 567 ~iG~p~~g~~~~IvD~~--g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~----------------------- 621 (759)
++|+|++|++++|+|++ ++++|.|+.|||+|+| |++++||+|+|+.+.+.|..
T Consensus 594 ~~G~~~~~~~~~ivd~~~~~~~~~~G~~GEL~i~G--~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1389)
T TIGR03443 594 PAGKGMKNVQLLVVNRNDRTQTCGVGEVGEIYVRA--GGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREF 671 (1389)
T ss_pred cCCCccCCCEEEEECCccCCCcCCCCCceEEEecc--cccchhcCCChhHhhhhccCCcccCcccccccccccccccccc
Confidence 79999999999999974 5789999999999999 89999999999999988753
Q ss_pred ---cCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcC
Q 004348 622 ---PFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE 679 (759)
Q Consensus 622 ---~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~ 679 (759)
+.+|||+|||+|+ +|+||+|.|||++|.+||.|.+++|++.++...++.++|||++..
T Consensus 672 ~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~ 751 (1389)
T TIGR03443 672 WLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQD 751 (1389)
T ss_pred cCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccC
Confidence 1357999999997 999999999999999999999999999888878889999999863
Q ss_pred CCC-C----------------------cHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHH
Q 004348 680 GVP-Y----------------------SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 731 (759)
Q Consensus 680 ~~~-~----------------------~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~ 731 (759)
... . ..+..++|+++++++||.||+|..|+++++||+|+||||||++|++.+
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~ 826 (1389)
T TIGR03443 752 KSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPD 826 (1389)
T ss_pred ccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCc
Confidence 211 0 011357899999999999999999999999999999999999997543
No 15
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6e-72 Score=623.54 Aligned_cols=481 Identities=28% Similarity=0.459 Sum_probs=399.3
Q ss_pred CCCe-EEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCC
Q 004348 214 LGDK-VAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIG--VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG 290 (759)
Q Consensus 214 ~pd~-~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~G--v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~ 290 (759)
.+++ +++++.... ++.+||+|+..++.|+|..|.++| +++||+|++++||++++++++|||+.+|+++.|++|.
T Consensus 29 ~~~~~~~~i~~~~~---g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~ 105 (537)
T KOG1176|consen 29 YLDRNTSLVYQDSD---GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPR 105 (537)
T ss_pred cccCcceEEEecCC---CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcc
Confidence 4444 888877432 589999999999999999999876 8999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC-CCCccc-h
Q 004348 291 FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ-DGRDIW-W 368 (759)
Q Consensus 291 ~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~-~ 368 (759)
+.+.++.+.+++++++++|++.... +.+.++...+ . ..++++..... ..... ...... +
T Consensus 106 ~~~~ei~~~~~~s~~kiif~d~~~~---------~~i~~~~~~~-----~-~~i~~l~~~~~----~~~~~~~~~~~~~~ 166 (537)
T KOG1176|consen 106 LTASEIAKQLKDSKPKLIFVDEDFY---------DKISEATSKL-----A-LKIIVLTGDEG----VISISDLVEDLDAF 166 (537)
T ss_pred cCHHHHHHHHHhcCCeEEEEcCchH---------HHHHHHHhhc-----C-CceEEEecccC----ccccccccccccch
Confidence 9999999999999999999988753 3333333322 1 33444433210 00000 001111 3
Q ss_pred hhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHH
Q 004348 369 QDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVT 448 (759)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~ 448 (759)
.+......... ......+|++.|+|||||||.||||++||++++.+.. .......+...|+.+++.|++|..|+...+
T Consensus 167 ~~~~~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~-~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~ 244 (537)
T KOG1176|consen 167 EDLMPEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTL-SIKIGWELTSDDVYLCTLPLFHIYGLITLL 244 (537)
T ss_pred hhccccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHH-HhhhcccCCCCceEEEechHHHHhHHHHHH
Confidence 33333222222 4456679999999999999999999999999655433 333445667789999999999999976554
Q ss_pred HHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHH
Q 004348 449 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRW 528 (759)
Q Consensus 449 ~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~ 528 (759)
++.+..|+++++. ..++++.++++|++|+||+++++|.++..|++.+. ...++++++|.+++||.+++++++++
T Consensus 245 ~~~~~~~~~ii~~----~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~--~~~~~l~sl~~v~~gga~~~~~~~~~ 318 (537)
T KOG1176|consen 245 LSLLAGGTTIICL----RKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPI--VKKYDLSSLRSVLSGGAPLSPATLEK 318 (537)
T ss_pred HHHHhCCceEEEC----CCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCc--cCcccCCccEEEEecCCCCCHHHHHH
Confidence 4455555555553 23599999999999999999999999999999863 45679999999999999999999999
Q ss_pred HHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccc
Q 004348 529 FFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTL 608 (759)
Q Consensus 529 ~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY 608 (759)
+.+++| ...+.+.||+||+++.++.+..... .+++++|++++|++..|.++.|+.+++++.||||++| +.++.||
T Consensus 319 ~~~~l~--~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg--~~imkGY 393 (537)
T KOG1176|consen 319 VKERLP--NVTVIQGYGMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRG--PQVMKGY 393 (537)
T ss_pred HHHhCC--CceEEEeeccccccCceeecCCCcc-CcccccCccccceEEEeeCCCCCCCCCCCceEEEEEC--cccchhh
Confidence 999998 4889999999999977665544332 5889999999999999999999999999999999999 9999999
Q ss_pred cCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCe
Q 004348 609 YGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQ 669 (759)
Q Consensus 609 ~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~ 669 (759)
|+||+.|.+.|-. +|||+|||+|+ +|+.|+|.|||++|.+||.|.|||||+++|+..|+
T Consensus 394 ~~NpeaT~~~~~~--~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge 471 (537)
T KOG1176|consen 394 LKNPEATKEAFDD--DGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGE 471 (537)
T ss_pred cCChHHHHhhccc--CCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCC
Confidence 9999999988854 49999999998 89999999999999999999999999999999999
Q ss_pred EEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 670 GIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 670 ~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
.++||||.+++...+ .++|+++++++|++|++|..++|+++||+|+||||.|+.|++.+...
T Consensus 472 ~p~A~VV~k~g~~lt---e~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~ 533 (537)
T KOG1176|consen 472 TPAAFVVLKKGSTLT---EKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKL 533 (537)
T ss_pred cceEEEEecCCCcCC---HHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhc
Confidence 999999999876665 68999999999999999999999999999999999999999998753
No 16
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4e-73 Score=776.47 Aligned_cols=563 Identities=18% Similarity=0.214 Sum_probs=456.9
Q ss_pred CCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhcccccccccccccc-ccc
Q 004348 103 GAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-SEN 181 (759)
Q Consensus 103 ~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~~~ 181 (759)
..++|||++.+.++ +.+...+.|++++|+++++++++++|.++|++++++|+..++++.. +. ..+... .+ .++
T Consensus 3637 ~~~~~~l~~~~~~~---~~l~~~l~y~~~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~ 3710 (4334)
T PRK05691 3637 THTNFPLTAVCYPG---DDLGLHLSYDQRYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPL-LG-EQERDF-LLDGCN 3710 (4334)
T ss_pred cccCCCeEEEEecC---CceEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCC-CC-HHHHHH-HHHhhC
Confidence 45789998876543 4577899999999999999999999999999999999999988852 11 111111 11 011
Q ss_pred ccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004348 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVI 261 (759)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va 261 (759)
.... .+ ....+++++|+++++ ++||++|+++. +.++||+||+++++++|++|+++||++|++|+
T Consensus 3711 ~~~~------~~---~~~~~~~~~~~~~~~-~~p~~~Av~~~------~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~ 3774 (4334)
T PRK05691 3711 RSER------DY---PLEQSYVRLFEAQVA-AHPQRIAASCL------DQQWSYAELNRAANRLGHALRAAGVGVDQPVA 3774 (4334)
T ss_pred CccC------CC---ccccCHHHHHHHHHH-hCCCceEEEcC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 1000 01 112378999999999 89999999987 67899999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCc
Q 004348 262 IYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISV 341 (759)
Q Consensus 262 i~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 341 (759)
|+++++++++++||||+|+|++||||||.+|.+|+.+|+++++++++|+++..... .......+.. ...
T Consensus 3775 v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~---------~~~~~~~~~~--~~~ 3843 (4334)
T PRK05691 3775 LLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQ---------ARALLDELGC--ANR 3843 (4334)
T ss_pred EEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccch---------hhhhhccccc--ccc
Confidence 99999999999999999999999999999999999999999999999998764321 0111111100 001
Q ss_pred cEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH
Q 004348 342 DVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 421 (759)
Q Consensus 342 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~ 421 (759)
..+++.+... ....+...+.....++++|||+|||||||+||||+++|++ +.+...+..
T Consensus 3844 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~-~~~~~~~~~ 3902 (4334)
T PRK05691 3844 PRLLVWEEVQ--------------------AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRG-MLNNQLSKV 3902 (4334)
T ss_pred cceeeecccc--------------------cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHH-HHHHHHHHH
Confidence 1122111110 0000111222345789999999999999999999999999 555566667
Q ss_pred HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc
Q 004348 422 YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (759)
Q Consensus 422 ~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~ 501 (759)
..++++++|+++++++++|+.+ ++++|.+|+.|+++++++.... .++..+++.+++++||++.++|++++.|+....
T Consensus 3903 ~~~~~~~~~~~~~~~s~~fd~s-~~~~~~~l~~G~~l~i~~~~~~-~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~- 3979 (4334)
T PRK05691 3903 PYLALSEADVIAQTASQSFDIS-VWQFLAAPLFGARVEIVPNAIA-HDPQGLLAHVQAQGITVLESVPSLIQGMLAEDR- 3979 (4334)
T ss_pred HhcCCCccceEEEecCCchhHH-HHHHHHHHhCCCEEEEcCcccc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhcc-
Confidence 7799999999999999999998 6899999999999999886544 489999999999999999999999998876532
Q ss_pred ccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC--CCCCCCCcCCCCCCceEEE
Q 004348 502 YVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--WPQKPGSATFPFFGVQPVI 579 (759)
Q Consensus 502 ~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~~iG~p~~g~~~~I 579 (759)
..+++||.+++|||+++++++++|.+.++ +++++|.||+||++..++...... ......++|+|++|++++|
T Consensus 3980 ----~~~~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v 4053 (4334)
T PRK05691 3980 ----QALDGLRWMLPTGEAMPPELARQWLQRYP--QIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYL 4053 (4334)
T ss_pred ----ccCCCceEEEecCCcCCHHHHHHHHHhCC--CCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEE
Confidence 25689999999999999999999998876 589999999999998665432111 1223457999999999999
Q ss_pred ECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhccc-----CCcEEEeCCeee-------------------c
Q 004348 580 VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCS-------------------S 635 (759)
Q Consensus 580 vD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~-----~~g~y~TGDl~~-------------------~ 635 (759)
+|++++++|.|+.|||+|+| +++++||+|+|++|.+.|..+ ..+||||||+|+ +
T Consensus 4054 ~d~~~~~~p~g~~GEL~i~G--~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~ 4131 (4334)
T PRK05691 4054 LDEALELVPLGAVGELCVAG--TGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIR 4131 (4334)
T ss_pred ECCCCCCCCCCCceEEEEec--ccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEec
Confidence 99999999999999999999 999999999999999988642 346999999998 9
Q ss_pred cEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCC
Q 004348 636 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLP 715 (759)
Q Consensus 636 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP 715 (759)
|+||+++|||++|.++|+|.+|+|+... ...++.++|||+.........+..++|+++|+++||+||+|+.|+.+++||
T Consensus 4132 G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP 4210 (4334)
T PRK05691 4132 GYRIELGEIEARLHEQAEVREAAVAVQE-GVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLP 4210 (4334)
T ss_pred eEEecHHHHHHHHHhCCCccEEEEEEec-CCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCC
Confidence 9999999999999999999999887654 445678999999876654444557889999999999999999999999999
Q ss_pred CCCCCcccHHHHHHHH
Q 004348 716 KTRSGKIMRRILRKIA 731 (759)
Q Consensus 716 ~T~~GKvdR~~L~~~~ 731 (759)
+|+||||||++|+++.
T Consensus 4211 ~t~~GKidr~~L~~~~ 4226 (4334)
T PRK05691 4211 LNANGKLDRKALPALD 4226 (4334)
T ss_pred CCCCCcccHhhcCCCc
Confidence 9999999999998763
No 17
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.8e-72 Score=714.35 Aligned_cols=553 Identities=19% Similarity=0.268 Sum_probs=445.3
Q ss_pred CcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhccccccccccccccccccccc
Q 004348 106 KISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSENLDVR 185 (759)
Q Consensus 106 ~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 185 (759)
.+||.+.+... .++++...++|++++|+++++++++++|..+|++++++|+.+++++.. +...+ ... ...++....
T Consensus 378 ~~dl~l~~~~~-~~~~l~~~~~y~~~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~-~~~~~-~~~-~~~~~~~~~ 453 (1296)
T PRK10252 378 VNDLELALFPD-EHGGLSIEILANPQRYDEATLIAHAERLKALIAQFAADPALLCGDVDI-LLPGE-YAQ-LAQVNATAV 453 (1296)
T ss_pred cCCeEEEEEEC-CCCcEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCC-CCHHH-HHH-HHHhcCCCC
Confidence 46887776532 235678899999999999999999999999999999999999988742 11111 000 000000000
Q ss_pred CCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 004348 186 KGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLP 265 (759)
Q Consensus 186 ~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~ 265 (759)
.+ ...+++++|+++++ .+||++|+++. ++.+||+||+++++++|+.|.+.|+++||+|+|+++
T Consensus 454 ------~~----~~~~l~~~~~~~~~-~~p~~~Al~~~------~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~ 516 (1296)
T PRK10252 454 ------EI----PETTLSALVAQQAA-KTPDAPALADA------RYQFSYREMREQVVALANLLRERGVKPGDSVAVALP 516 (1296)
T ss_pred ------CC----CcCCHHHHHHHHHH-hCCCCeEEEcC------CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeC
Confidence 11 11268899999998 89999999976 678999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEE
Q 004348 266 MLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCL 345 (759)
Q Consensus 266 ~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi 345 (759)
|++++++++|||+++|++|+|+||++|.+++.+++++++++++|+++..... .... ..+. ++
T Consensus 517 ~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~-------------~~~~----~~~~-~~ 578 (1296)
T PRK10252 517 RSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPR-------------FADV----PDLT-SL 578 (1296)
T ss_pred CCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhh-------------cccC----CCce-ee
Confidence 9999999999999999999999999999999999999999999997653210 0000 0010 11
Q ss_pred EeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC
Q 004348 346 TYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (759)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (759)
.++.. ... ....+.....++++|||+|||||||+||||+++|++ +.+...+....++
T Consensus 579 ~~~~~---------------------~~~-~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~-l~~~~~~~~~~~~ 635 (1296)
T PRK10252 579 CYNAP---------------------LAP-QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTA-IVNRLLWMQNHYP 635 (1296)
T ss_pred ecccc---------------------ccc-ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHH-HHHHHHHHHHhcC
Confidence 11100 000 001111223678999999999999999999999999 5566777778899
Q ss_pred CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccccc
Q 004348 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (759)
Q Consensus 426 l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~ 505 (759)
++++|++++.++++|+.+ ++++|.+|++|+++++.+.... .++..+++.|++++||++.++|+++..+++........
T Consensus 636 ~~~~d~~l~~~~~~fd~~-~~~~~~~l~~G~~l~~~~~~~~-~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~ 713 (1296)
T PRK10252 636 LTADDVVLQKTPCSFDVS-VWEFFWPFIAGAKLVMAEPEAH-RDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGAR 713 (1296)
T ss_pred CCCCCEEEEeCCcchhhh-HHHHHHHHhCCCEEEECChhcc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccccc
Confidence 999999999999999998 6789999999999999865433 48999999999999999999999999988764321122
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC-C----CCCCCCcCCCCCCceEEEE
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-W----PQKPGSATFPFFGVQPVIV 580 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~-~----~~~~~~iG~p~~g~~~~Iv 580 (759)
..+++||.+++|||+++++++++|.+.++ ++++|.||+||++..++...... . .....++|+|++|++++|+
T Consensus 714 ~~~~~lr~i~~gGe~l~~~~~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~ 790 (1296)
T PRK10252 714 QSCASLRQVFCSGEALPADLCREWQQLTG---APLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRIL 790 (1296)
T ss_pred ccCCCccEEEEecCCCCHHHHHHHHhcCC---CEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEE
Confidence 34689999999999999999999998765 78999999999987655322111 1 2345689999999999999
Q ss_pred CCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhccc----CCcEEEeCCeee-------------------ccE
Q 004348 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP----FPGYYFTGDGCS-------------------SGH 637 (759)
Q Consensus 581 D~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~----~~g~y~TGDl~~-------------------~G~ 637 (759)
|++++++|.|+.|||+|+| +++++||+++|+.+.+.|... ..+||+|||+|+ +|+
T Consensus 791 d~~~~~~~~g~~Gel~i~g--~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ 868 (1296)
T PRK10252 791 DARMRPVPPGVAGDLYLTG--IQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQ 868 (1296)
T ss_pred CCCCCCCCCCCceEEEecc--cccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeE
Confidence 9999999999999999999 899999999999888887542 345999999998 899
Q ss_pred eeCHHHHHHHHhcCCccceEEEEeEe----c--CCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEe
Q 004348 638 RIGTAEVESALVSHPQCAEAAVVGVE----H--EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWA 711 (759)
Q Consensus 638 rI~~~eIE~~L~~~p~V~ea~Vv~~~----~--~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v 711 (759)
||+|.|||++|.+||+|.+|+|+.+. + ....+.+++||+...+...+ .++|+++++++||.||+|..++.+
T Consensus 869 ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~---~~~l~~~l~~~Lp~~~~P~~~~~~ 945 (1296)
T PRK10252 869 RIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLD---TSALQAQLRERLPPHMVPVVLLQL 945 (1296)
T ss_pred EecHHHHHHHHHhCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCC---HHHHHHHHHhhCchhcCCcEEEEe
Confidence 99999999999999999999887653 1 11224799999987664433 578999999999999999999999
Q ss_pred CCCCCCCCCcccHHHHHHH
Q 004348 712 PGLPKTRSGKIMRRILRKI 730 (759)
Q Consensus 712 ~~lP~T~~GKvdR~~L~~~ 730 (759)
++||+|+||||||++|++.
T Consensus 946 ~~lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 946 DQLPLSANGKLDRKALPLP 964 (1296)
T ss_pred cCCCCCCCcChhHHhcCCC
Confidence 9999999999999999864
No 18
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.1e-71 Score=640.61 Aligned_cols=517 Identities=41% Similarity=0.702 Sum_probs=431.7
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~i 271 (759)
+||.++.+|.++++++++++..+|+++|+++.+.. ..+++||+||.++++++|.+|.++|+++||+|+|+++|+++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~ 112 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHADGGRKDKVALRYLDAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY 112 (570)
T ss_pred ccCCCCceeHHHHHHHHhhccCCCCceEEEEECCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH
Confidence 79999999999999999886347999999986432 2578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCc
Q 004348 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (759)
Q Consensus 272 va~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~ 351 (759)
+++|||+++|++++|+++.++.+++.+++++++++++|+++....... ...+ +.++.++.++...
T Consensus 113 ~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~ 177 (570)
T PRK04319 113 FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKP-----------ADDL----PSLKHVLLVGEDV 177 (570)
T ss_pred HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccc-----------hhcC----CCceEEEEECCCc
Confidence 999999999999999999999999999999999999999866432100 0011 3344555443221
Q ss_pred cccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcE
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~ 431 (759)
. .......|.+.+...+...+.....++++++|+|||||||.||||+++|++++ .........+++.++|+
T Consensus 178 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~-~~~~~~~~~~~~~~~d~ 248 (570)
T PRK04319 178 E--------EGPGTLDFNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAML-QHYQTGKYVLDLHEDDV 248 (570)
T ss_pred C--------CCcCccCHHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHH-HHHHHHHHhcCCCCCce
Confidence 0 01122345554433333333344567899999999999999999999999954 44444556688999999
Q ss_pred EEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCe
Q 004348 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 511 (759)
Q Consensus 432 ~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sL 511 (759)
+++..+++|..++.+.++.+|++|+++++.... +++..+++.|+++++|+++++|++++.|++.........++++|
T Consensus 249 ~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l 325 (570)
T PRK04319 249 YWCTADPGWVTGTSYGIFAPWLNGATNVIDGGR---FSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSL 325 (570)
T ss_pred EEecCChHHhhCchHHHHHHHhcCceEEEECCC---CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccc
Confidence 999999999999888899999999999997542 58999999999999999999999999998765433344578899
Q ss_pred eEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCc
Q 004348 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGEC 591 (759)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~ 591 (759)
|.+++||+++++++.+++.+.++ .++++.||+||++...+..... ....++++|+|++|++++|+|+++++++.|+
T Consensus 326 r~~~~gG~~l~~~~~~~~~~~~g---~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~ 401 (570)
T PRK04319 326 RHILSVGEPLNPEVVRWGMKVFG---LPIHDNWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVDDQGNELPPNR 401 (570)
T ss_pred eEEEEcccCCCHHHHHHHHHHhC---CCeEeceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEECCCCCCCCCCC
Confidence 99999999999999999999887 7899999999998765443222 1345688999999999999999999999999
Q ss_pred eEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCC
Q 004348 592 SGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHP 652 (759)
Q Consensus 592 ~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p 652 (759)
.|||+|+|++|++++|||++++.+.+.|. +|||+|||+++ +|++|+|.|||++|.+||
T Consensus 402 ~Gel~i~~~~~~~~~GY~~~~~~~~~~~~---~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~ 478 (570)
T PRK04319 402 MGNLAIKKGWPSMMRGIWNNPEKYESYFA---GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHP 478 (570)
T ss_pred ceEEEEcCCCChHHhHhcCCHHHhhhhhc---CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCC
Confidence 99999998778999999999999887763 78999999988 799999999999999999
Q ss_pred ccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 653 QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 653 ~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
.|.+++|++.+++..++.+++||++.++....+++.++|+++++++|+.|++|..|+++++||+|++||++|++|+++..
T Consensus 479 ~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 479 AVAEAGVIGKPDPVRGEIIKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred CeeecceecccCcCCceEEEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHh
Confidence 99999999999988899999999998776555666789999999999999999999999999999999999999999875
Q ss_pred cccCCCCCCCCCCC
Q 004348 733 RQLDELGDTSTLAD 746 (759)
Q Consensus 733 ~~~~~~~~~~~~~~ 746 (759)
+. ...+.+++.|
T Consensus 559 ~~--~~~~~~~~~~ 570 (570)
T PRK04319 559 GL--PEGDLSTMED 570 (570)
T ss_pred CC--CcCccccccC
Confidence 43 2234455543
No 19
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.5e-72 Score=772.30 Aligned_cols=558 Identities=19% Similarity=0.252 Sum_probs=458.6
Q ss_pred CCCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhcccccccccccccc-c
Q 004348 101 PSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-S 179 (759)
Q Consensus 101 ~~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~ 179 (759)
....++|||++.+.. ..+++.+.++|++++|+++++.+++++|.++|+.++++|+..++++.. +. ..+... .+ .
T Consensus 425 ~~~~~~~dL~l~v~~--~~~~l~~~~~y~~~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~-~~-~~~~~~-~~~~ 499 (5163)
T PRK12316 425 KSRTTQFDLTLDTYE--KGGRLHAALTYATDLFEARTVERMARHWQNLLRGMVENPQARVDELPM-LD-AEERGQ-LVEG 499 (5163)
T ss_pred CCCccceeEEEEEEE--cCCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhccccccccCCC-CC-HHHHHH-HHHH
Confidence 456789999998764 457788899999999999999999999999999999999999988852 11 111111 11 0
Q ss_pred ccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004348 180 ENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 259 (759)
Q Consensus 180 ~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~ 259 (759)
++.... .+ ....+++++|+++++ ++||++|+++. ++++||+||+++++++|+.|++.|+++|++
T Consensus 500 ~~~~~~------~~---~~~~~~~~~~~~~a~-~~p~~~A~~~~------~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~ 563 (5163)
T PRK12316 500 WNATAA------EY---PLQRGVHRLFEEQVE-RTPEAPALAFG------EETLDYAELNRRANRLAHALIERGVGPDVL 563 (5163)
T ss_pred hcCccc------cC---CCCCCHHHHHHHHHH-HCCCCeEEEeC------CceEcHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 110000 00 012368999999999 89999999986 678999999999999999999999999999
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCC
Q 004348 260 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 339 (759)
Q Consensus 260 Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 339 (759)
|+|+++|++++++++|||+|+|++|+|+||.+|.+++.+++++++++++|++...... +.. .
T Consensus 564 V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~-------------~~~-----~ 625 (5163)
T PRK12316 564 VGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRK-------------LPL-----A 625 (5163)
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhh-------------CCc-----c
Confidence 9999999999999999999999999999999999999999999999999997653210 000 0
Q ss_pred CccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHH
Q 004348 340 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 419 (759)
Q Consensus 340 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~ 419 (759)
....++.++.... | ........+.....++++|||+|||||||+||||+++|++ +.+...+
T Consensus 626 ~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~-l~~~~~~ 686 (5163)
T PRK12316 626 AGVQVLDLDRPAA---------------W---LEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRA-LSNRLCW 686 (5163)
T ss_pred cCceEEEecCcch---------------h---hccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHH-HHHHHHH
Confidence 0111232221110 0 0111111222345689999999999999999999999999 4566667
Q ss_pred HHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcC
Q 004348 420 FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG 499 (759)
Q Consensus 420 ~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~ 499 (759)
....++++++|++++++|++|+.+ .+++|.+|++|+++++.+.... .++..+++.|++++||++.++|++++.|++..
T Consensus 687 ~~~~~~~~~~d~~l~~~p~~fd~~-~~~~~~~L~~G~~l~i~~~~~~-~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~ 764 (5163)
T PRK12316 687 MQQAYGLGVGDTVLQKTPFSFDVS-VWEFFWPLMSGARLVVAAPGDH-RDPAKLVELINREGVDTLHFVPSMLQAFLQDE 764 (5163)
T ss_pred HHHhcCCCCCCEEEeeCCeehHHH-HHHHHHHHhCCCEEEECCcccc-CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcc
Confidence 778899999999999999999998 5789999999999999875433 48999999999999999999999999998753
Q ss_pred CcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEE
Q 004348 500 NEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVI 579 (759)
Q Consensus 500 ~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~I 579 (759)
. ..++++||.+++|||+++++++++|.+.++ +++++|.||+||++..++............++|+|++|++++|
T Consensus 765 ~----~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i 838 (5163)
T PRK12316 765 D----VASCTSLRRIVCSGEALPADAQEQVFAKLP--QAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYI 838 (5163)
T ss_pred c----cccCCCccEEEEeeccCCHHHHHHHHHhCC--CCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEE
Confidence 2 236789999999999999999999988876 4899999999999865443222222335678999999999999
Q ss_pred ECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc----cCCcEEEeCCeee-------------------cc
Q 004348 580 VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----PFPGYYFTGDGCS-------------------SG 636 (759)
Q Consensus 580 vD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~----~~~g~y~TGDl~~-------------------~G 636 (759)
+|++++++|.|+.|||+|+| |++++||+|+|+.+.+.|.. +.++||+|||+|+ +|
T Consensus 839 ~d~~~~~~p~G~~GEl~i~G--~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G 916 (5163)
T PRK12316 839 LDANLEPVPVGVLGELYLAG--RGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRG 916 (5163)
T ss_pred ECCCCCCCCCCCceEEEecc--cccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEce
Confidence 99999999999999999999 99999999999999888854 2356999999998 89
Q ss_pred EeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCC
Q 004348 637 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 716 (759)
Q Consensus 637 ~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~ 716 (759)
+||+|.|||++|.+||+|.+|+|++.+ ++.++|||++.++.... .++|+++++++||+||+|+.|+++++||+
T Consensus 917 ~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~ 989 (5163)
T PRK12316 917 LRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEGGDW---REALKAHLAASLPEYMVPAQWLALERLPL 989 (5163)
T ss_pred EEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCCCCC---HHHHHHHHHhhCCCccCCCeEEEHhhCCC
Confidence 999999999999999999999999875 67899999987654333 57899999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHhc
Q 004348 717 TRSGKIMRRILRKIASR 733 (759)
Q Consensus 717 T~~GKvdR~~L~~~~~~ 733 (759)
|+||||||++|++....
T Consensus 990 t~~GKidr~~L~~~~~~ 1006 (5163)
T PRK12316 990 TPNGKLDRKALPAPEAS 1006 (5163)
T ss_pred CCCCChhHHhhcCcccc
Confidence 99999999999876543
No 20
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=7.7e-72 Score=768.91 Aligned_cols=549 Identities=19% Similarity=0.245 Sum_probs=452.9
Q ss_pred CCCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhcccccccccccccc-c
Q 004348 101 PSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVC-S 179 (759)
Q Consensus 101 ~~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~-~ 179 (759)
....++|||.+.+.. ..+++...++|++++|+++++++++++|..+|++++++|+..++++.. +. ..+... ++ .
T Consensus 2971 ~~~~~~~dL~l~v~~--~~~~l~~~~~y~~~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~-~~-~~~~~~-~~~~ 3045 (5163)
T PRK12316 2971 DGAATQFDLALDTWE--SAEGLGASLTYATDLFDARTVERLARHWQNLLRGMVENPQRSVDELAM-LD-AEERGQ-LLEA 3045 (5163)
T ss_pred cCCccceeeEEEEEe--cCCcEEEEEEECcCCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccC-CC-HHHHHH-HHHH
Confidence 345688999888764 346688899999999999999999999999999999999999998842 11 111111 11 0
Q ss_pred ccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004348 180 ENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 259 (759)
Q Consensus 180 ~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~ 259 (759)
++.... .+ ....+++++|+++++ ++|+++|+++. ++.+||+||+++++++|++|++.|+++|++
T Consensus 3046 ~~~~~~------~~---~~~~~~~~~~~~~~~-~~p~~~Av~~~------~~~lTY~eL~~~~~~lA~~L~~~gv~~~~~ 3109 (5163)
T PRK12316 3046 WNATAA------EY---PLERGVHRLFEEQVE-RTPDAVALAFG------EQRLSYAELNRRANRLAHRLIERGVGPDVL 3109 (5163)
T ss_pred hCCCCc------CC---CCcCCHHHHHHHHHH-hCCCCeeEeeC------CeEEeHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 111100 00 111368999999999 89999999987 688999999999999999999999999999
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCC
Q 004348 260 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 339 (759)
Q Consensus 260 Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 339 (759)
|+|+++|++++++++|||+|+|++||||||.+|.+|+.+++++++++++|+++... +.. .
T Consensus 3110 V~l~~~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~---------------~~~-----~ 3169 (5163)
T PRK12316 3110 VGVAVERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHLR---------------LPL-----A 3169 (5163)
T ss_pred EEEEccCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCcccc---------------CCc-----c
Confidence 99999999999999999999999999999999999999999999999999876430 000 0
Q ss_pred CccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHH
Q 004348 340 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 419 (759)
Q Consensus 340 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~ 419 (759)
....++.++... .......+.....++++|||+|||||||+||||+++|++ +.+...+
T Consensus 3170 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~-l~~~~~~ 3227 (5163)
T PRK12316 3170 QGVQVLDLDRGD---------------------ENYAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSA-LSNHLCW 3227 (5163)
T ss_pred CCccEEEecccc---------------------ccccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHH-HHHHHHH
Confidence 111223222210 000111222345689999999999999999999999999 5566677
Q ss_pred HHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcC
Q 004348 420 FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG 499 (759)
Q Consensus 420 ~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~ 499 (759)
....++++++|+++++++++|+.+ ++++|.+|++|+++++.+.... .++..+.+.++++++|++.++|+++..+++..
T Consensus 3228 ~~~~~~~~~~d~~l~~~~~~fd~~-~~~i~~~L~~G~~l~~~~~~~~-~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~ 3305 (5163)
T PRK12316 3228 MQQAYGLGVGDRVLQFTTFSFDVF-VEELFWPLMSGARVVLAGPEDW-RDPALLVELINSEGVDVLHAYPSMLQAFLEEE 3305 (5163)
T ss_pred HHHhhCCCcccEEEeecCccHHHH-HHHHHHHHhCCCEEEEcChhhc-CCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc
Confidence 777899999999999999999987 6899999999999999865433 48899999999999999999999999988653
Q ss_pred CcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEE
Q 004348 500 NEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVI 579 (759)
Q Consensus 500 ~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~I 579 (759)
. ...+++||.+++|||++++++.++|. .+ ++++|.||+||+++.++............++|+|++|++++|
T Consensus 3306 ~----~~~~~~lr~~~~gGe~l~~~~~~~~~--~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i 3376 (5163)
T PRK12316 3306 D----AHRCTSLKRIVCGGEALPADLQQQVF--AG---LPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYI 3376 (5163)
T ss_pred c----cccCCcceEEEEccccCCHHHHHHHH--hC---CcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEE
Confidence 2 23568999999999999999999998 33 789999999999987664332222234678999999999999
Q ss_pred ECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhccc----CCcEEEeCCeee-------------------cc
Q 004348 580 VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP----FPGYYFTGDGCS-------------------SG 636 (759)
Q Consensus 580 vD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~----~~g~y~TGDl~~-------------------~G 636 (759)
+|++++++|.|+.|||+|+| +++++||+|+|++|.+.|..+ ..+||+|||+|+ +|
T Consensus 3377 ~d~~~~~~p~G~~GEl~i~G--~~v~~GY~~~~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G 3454 (5163)
T PRK12316 3377 LDGSLEPVPVGALGELYLGG--EGLARGYHNRPGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRG 3454 (5163)
T ss_pred ECCCCCCCCCCCCceEEecc--cccchhcCCChhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEeeCc
Confidence 99999999999999999999 999999999999999888642 346999999998 89
Q ss_pred EeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCC
Q 004348 637 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 716 (759)
Q Consensus 637 ~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~ 716 (759)
+||+|+|||++|.+||+|.+|+|++.. ++.++|||++...... ..++|+++|+++||.||+|..|+++++||+
T Consensus 3455 ~rIel~eIE~~l~~~~~V~~a~v~~~~----~~~l~a~vv~~~~~~~---~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~ 3527 (5163)
T PRK12316 3455 FRIELGEIEARLLEHPWVREAVVLAVD----GRQLVAYVVPEDEAGD---LREALKAHLKASLPEYMVPAHLLFLERMPL 3527 (5163)
T ss_pred EeeChHHHHHHHHhCCCcceEEEEEcc----CCeEEEEEEcCCcCcc---cHHHHHHHHHhhCCcccCcceeeeHhhcCC
Confidence 999999999999999999999998764 5689999998654332 257899999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHh
Q 004348 717 TRSGKIMRRILRKIAS 732 (759)
Q Consensus 717 T~~GKvdR~~L~~~~~ 732 (759)
|+||||||++|++...
T Consensus 3528 t~~GKvdr~~L~~~~~ 3543 (5163)
T PRK12316 3528 TPNGKLDRKALPRPDA 3543 (5163)
T ss_pred CCCcchhHHhcCCCcc
Confidence 9999999999987543
No 21
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=9e-71 Score=571.45 Aligned_cols=504 Identities=23% Similarity=0.292 Sum_probs=428.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++++-.++ .-||+.|+++..+ +.++||+|+.+.+..+|..|.++|+++||||+|..||+.+|+..+|||.++
T Consensus 51 Tigq~l~~~t~-~v~dkea~Vf~~e----g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 51 TIGQLLETTTE-RVPDKEAAVFDHE----GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred cHHHHHHHHhh-ccCcceEEEEeec----cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 78889988888 8999999998843 677999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhh---------cCCCccEEEEeccCc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK---------SGISVDVCLTYENQS 351 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~vi~~~~~~ 351 (759)
|.+.++++|.|+.+++++.|+..+++++|+...+ +..++.+.+.++..+... .-+.+.++|..++..
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~----k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~ 201 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQF----KTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH 201 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchh----hhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC
Confidence 9999999999999999999999999999987654 333444555555544321 114556666655322
Q ss_pred cccccccccCCCCccchhhhcCCCCCCC------CccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKYPTKC------EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (759)
. ......++|.+.....+. -.....|+|++.|.|||||||.|||+.+||-|++.+ .......++
T Consensus 202 ~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nn-a~~vg~r~g 271 (596)
T KOG1177|consen 202 P---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNN-ARAVGARAG 271 (596)
T ss_pred c---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhh-HHHHHHHhC
Confidence 1 112333455544332211 123567899999999999999999999999996655 444556789
Q ss_pred CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccccc
Q 004348 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (759)
Q Consensus 426 l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~ 505 (759)
++..+++++..|+.|.+|....++.+|+.|+|+|++... +++...++.|.++|+|.++.+|+++..|++.+. ..+
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~---f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~--~~~ 346 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPS---FDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQ--KQQ 346 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCC---CChHHHHHHHHhhceEEEecChHHHHHHhcchh--hcc
Confidence 999889999999999999889999999999999998654 699999999999999999999999999998765 567
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCC-CCCCCCcCCCCCCceEEEECCCC
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW-PQKPGSATFPFFGVQPVIVDEKG 584 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~-~~~~~~iG~p~~g~~~~IvD~~g 584 (759)
.+++++|.++.||.++|+++++.+.+.... ..+...||+|||+...+....++. .....++|+.+++.+..|+|++|
T Consensus 347 ~~~s~lr~~vigGa~~s~eLlk~iv~~~~m--~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g 424 (596)
T KOG1177|consen 347 VDLSSLRKGVIGGAPVSPELLKLIVNQMNM--KDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDG 424 (596)
T ss_pred CchhhhhhheeCCCCCCHHHHHHHHHhhCc--eeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCC
Confidence 899999999999999999999999987652 457889999999987776655542 23456899999999999999999
Q ss_pred cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHH
Q 004348 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVE 645 (759)
Q Consensus 585 ~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE 645 (759)
..+|-|+.|||+|+| ++.|.|||++++++.+..- .+.||+|||.++ +|.+|+|.|||
T Consensus 425 ~~v~~~~~Gel~iRG--Y~tMl~Ywg~~~kT~eti~--~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE 500 (596)
T KOG1177|consen 425 SEVPLGTKGELLIRG--YSTMLGYWGEEEKTKETIG--NDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELE 500 (596)
T ss_pred CccccCCCceEEEEe--chhheeecCCcccchhhcc--cccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHH
Confidence 999999999999999 8999999999998888754 378999999988 89999999999
Q ss_pred HHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHH
Q 004348 646 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 725 (759)
Q Consensus 646 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~ 725 (759)
+.|.+||.|.++.||+++|+..|+.++|+|.+.++...- ...++|+.+++.+|..|++|++|+++++||+|-+|||.|-
T Consensus 501 ~fL~~hp~V~~a~VVGV~D~R~GE~VCA~vRLqe~~e~~-~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKF 579 (596)
T KOG1177|consen 501 DFLNKHPLVKEAHVVGVPDERLGEEVCACVRLQEGAEGK-TTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKF 579 (596)
T ss_pred HHHhhCCCeeeEEEEccCCCcccceEEEEEEeecccccc-ccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhH
Confidence 999999999999999999999999999999998876531 2378999999999999999999999999999999999999
Q ss_pred HHHHHHhccc
Q 004348 726 ILRKIASRQL 735 (759)
Q Consensus 726 ~L~~~~~~~~ 735 (759)
+++++..+++
T Consensus 580 eir~~~k~~l 589 (596)
T KOG1177|consen 580 EIREMSKGHL 589 (596)
T ss_pred HHHHHHHhhc
Confidence 9999988653
No 22
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.5e-70 Score=751.03 Aligned_cols=556 Identities=20% Similarity=0.268 Sum_probs=454.9
Q ss_pred CCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhccccccccccccccccc
Q 004348 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSEN 181 (759)
Q Consensus 102 ~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 181 (759)
....+|||.+.+.... ++.+...++|++++|+.+++++++++|..+|++++++|++.++++.. +. ..+... +..++
T Consensus 1047 ~~~~~~~l~l~~~~~~-~~~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~~~~~~p~~~~~~l~l-~~-~~~~~~-l~~~~ 1122 (4334)
T PRK05691 1047 SREAKFDLQLHSEEDR-NGRLTLSFDYAAELFDAATIERLAEHFLALLEQVCEDPQRALGDVQL-LD-AAERAQ-LAQWG 1122 (4334)
T ss_pred CCcccceEEEEEEECC-CCcEEEEEEEchhhCCHHHHHHHHHHHHHHHHHHHhCcccchhhhcC-CC-HHHHHH-HHhcc
Confidence 4457899988755322 34578899999999999999999999999999999999999999852 11 111111 11111
Q ss_pred ccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004348 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVI 261 (759)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va 261 (759)
.... .....+++++|+++++ .+||++|+++. ++.+||+||+++++++|++|++.|+++|++|+
T Consensus 1123 ~~~~----------~~~~~~l~~~~~~~a~-~~p~~~Al~~~------~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~ 1185 (4334)
T PRK05691 1123 QAPC----------APAQAWLPELLNEQAR-QTPERIALVWD------GGSLDYAELHAQANRLAHYLRDKGVGPDVCVA 1185 (4334)
T ss_pred CCCC----------CCccCCHHHHHHHHHH-hCCCCeEEEEC------CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 1100 0112368999999999 89999999986 57899999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCc
Q 004348 262 IYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISV 341 (759)
Q Consensus 262 i~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 341 (759)
|++++++++++++|||+|+|++|+|+||.+|.+|+.+++++++++++|++...... +... ...
T Consensus 1186 i~~~~s~~~iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~-------------~~~~----~~~ 1248 (4334)
T PRK05691 1186 IAAERSPQLLVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLER-------------LPQA----EGV 1248 (4334)
T ss_pred EEeCCCHHHHHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhh-------------cccc----cCc
Confidence 99999999999999999999999999999999999999999999999997653210 0000 001
Q ss_pred cEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH
Q 004348 342 DVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 421 (759)
Q Consensus 342 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~ 421 (759)
.++.++... . .......+.....++++|||+|||||||+||||+++|++ +.+...+..
T Consensus 1249 -~~~~~~~~~----------------~----~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~-l~~~~~~~~ 1306 (4334)
T PRK05691 1249 -SAIALDSLH----------------L----DSWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAA-LAERLQWMQ 1306 (4334)
T ss_pred -eEEeecccc----------------c----cccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHH-HHHHHHHHH
Confidence 111111110 0 000111122234678999999999999999999999999 555666777
Q ss_pred HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc
Q 004348 422 YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (759)
Q Consensus 422 ~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~ 501 (759)
..+++.++|+++++++++|+.+ .+++|.+|++|+++++.+.... .++..+++.|++++||++.++|++++.|.+...
T Consensus 1307 ~~~~~~~~d~~l~~~~~~fd~s-~~~~~~~L~~G~~l~i~~~~~~-~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~- 1383 (4334)
T PRK05691 1307 ATYALDDSDVLMQKAPISFDVS-VWECFWPLITGCRLVLAGPGEH-RDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL- 1383 (4334)
T ss_pred HhcCCCCCCEEEEeCCccHHHH-HHHHHHHHhCCCEEEEcCcccc-CCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc-
Confidence 7899999999999999999998 5799999999999999865433 489999999999999999999999999986532
Q ss_pred ccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC
Q 004348 502 YVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD 581 (759)
Q Consensus 502 ~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD 581 (759)
..++++||.+++|||++++++.++|.+.++ +++++|.||+||+++.++............++|+|++|+.++|+|
T Consensus 1384 ---~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~--~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d 1458 (4334)
T PRK05691 1384 ---AAACTSLRRLFSGGEALPAELRNRVLQRLP--QVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD 1458 (4334)
T ss_pred ---cccCCcccEEEEeecCCCHHHHHHHHHhCC--CcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC
Confidence 236789999999999999999999999886 589999999999987665422212223457899999999999999
Q ss_pred CCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhccc-----CCcEEEeCCeee-------------------ccE
Q 004348 582 EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-----FPGYYFTGDGCS-------------------SGH 637 (759)
Q Consensus 582 ~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~-----~~g~y~TGDl~~-------------------~G~ 637 (759)
++++++|.|+.|||+|+| +++++||+|+|+.+.+.|... ..+||+|||+|+ +|+
T Consensus 1459 ~~~~~vp~G~~GEL~i~G--~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~ 1536 (4334)
T PRK05691 1459 AELNLLPPGVAGELCIGG--AGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGF 1536 (4334)
T ss_pred CCCCCCCCCCceEEEecC--cccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCE
Confidence 999999999999999999 999999999999999888642 235999999998 899
Q ss_pred eeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCC
Q 004348 638 RIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKT 717 (759)
Q Consensus 638 rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T 717 (759)
||+|+|||++|.+||+|.+|+|++..+. .++.+++|++...+.... .++|+++|+++||.||+|..|+++++||+|
T Consensus 1537 rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t 1612 (4334)
T PRK05691 1537 RVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAGQEAE---AERLKAALAAELPEYMVPAQLIRLDQMPLG 1612 (4334)
T ss_pred EcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCCCCCC---HHHHHHHHHHhCccccCCcEEEEccccCCC
Confidence 9999999999999999999999976654 457899999987654433 468999999999999999999999999999
Q ss_pred CCCcccHHHHHHHH
Q 004348 718 RSGKIMRRILRKIA 731 (759)
Q Consensus 718 ~~GKvdR~~L~~~~ 731 (759)
+||||||++|++..
T Consensus 1613 ~~GKidr~~L~~~~ 1626 (4334)
T PRK05691 1613 PSGKLDRRALPEPV 1626 (4334)
T ss_pred CCCCcChhhcCccc
Confidence 99999999998654
No 23
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-67 Score=607.95 Aligned_cols=491 Identities=31% Similarity=0.403 Sum_probs=401.7
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.+.+++++. .+|+++|+++.+.. .++||+||.++++++|+.|++.||++||+|+|+++|++++++++|||+++
T Consensus 12 ~~~~~l~~~a~-~~~~~~a~~~~~~~----~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~ 86 (534)
T COG0318 12 TLASLLERAAR-RNPDRPALIFLGRG----GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRA 86 (534)
T ss_pred cHHHHHHHHHH-hCCCceEEEEcCCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57888999988 89999999998421 25999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++.+||+|.+..+++.+++++++++++++++... +.+....... +....++......
T Consensus 87 Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~--------- 144 (534)
T COG0318 87 GAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFA---------ALLEAVAEAL----PVVLVVLLVGDAD--------- 144 (534)
T ss_pred CEEEeecCcccCHHHHHHHHHhcCCeEEEEcccch---------hHHHHHhccC----CcceEEEeccccc---------
Confidence 99999999999999999999999999999987631 2222211111 1111111111110
Q ss_pred CCCCc-cchhhhcCCCCCC-CCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC--CCCCcEEEEec
Q 004348 361 QDGRD-IWWQDVVPKYPTK-CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD--YKPSDVYWCTA 436 (759)
Q Consensus 361 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~--l~~~d~~l~~~ 436 (759)
... ..+.+.....+.. ......+++|+|+|+|||||||.||||++||++++.+ .......++ +++.|++++.+
T Consensus 145 --~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~-~~~~~~~~~~~~~~~d~~l~~l 221 (534)
T COG0318 145 --DRLPITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLAN-AAGIAAALGGGLTPDDVVLSWL 221 (534)
T ss_pred --ccccccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHH-HHHHHHHhcccCCCCceEEEec
Confidence 000 1233332222111 1112267899999999999999999999999996655 444555667 89999999999
Q ss_pred CcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCC-eeEEE
Q 004348 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS-LRVLG 515 (759)
Q Consensus 437 ~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~s-Lr~v~ 515 (759)
|++|++|+...++.+++.|+++++..+. .+++..++..+.++++|++..+|+++..|+...... ..++.+ ||.++
T Consensus 222 Pl~H~~Gl~~~~~~~~~~G~~~v~~~~~--~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~--~~~~~~~lr~~~ 297 (534)
T COG0318 222 PLFHIFGLIVGLLAPLLGGGTLVLLSPE--PFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKD--DDDLSSSLRLVL 297 (534)
T ss_pred ChHHHHHHHHHHHHHHHcCCEEEeCCCC--CcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccC--ccccccceEEEE
Confidence 9999999887778789999999997632 258999999999999999999999999998886532 223444 99999
Q ss_pred EeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCc-ccCCCceEE
Q 004348 516 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGV-EIEGECSGY 594 (759)
Q Consensus 516 ~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~-~vp~g~~GE 594 (759)
+||++++++++++|.+.++. ..++..||+||++..++.........+.+++|+|++|++++|+|+++. ++| |..||
T Consensus 298 ~gg~~~~~~~~~~~~~~~~~--~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGe 374 (534)
T COG0318 298 SGGAPLPPELLERFEERFGP--IAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGE 374 (534)
T ss_pred ecCCcCCHHHHHHHHHHhCC--CceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceE
Confidence 99999999999999999983 579999999999976654433220135677899999999999997665 666 88999
Q ss_pred EEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccc
Q 004348 595 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCA 655 (759)
Q Consensus 595 L~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ 655 (759)
|+|+| |+++.|||++|+.+.+.|-. +|||+|||+|+ +|++|+|.|||.+|.+||.|.
T Consensus 375 i~irg--p~v~~GY~~~pe~t~~~f~~--~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~ 450 (534)
T COG0318 375 IWVRG--PNVMKGYWNRPEATAEAFDE--DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVA 450 (534)
T ss_pred EEEEC--chhhhhhcCChHHHHHhhcc--CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcc
Confidence 99999 99999999999999985532 59999999986 899999999999999999999
Q ss_pred eEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 656 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 656 ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+|+|++++|+..|+.++|+|+++++.. .....++|+++|+++++.|++|+.++++++||+|++||++|+.|++.+..
T Consensus 451 ~aavvgvpd~~~Ge~~~a~v~~~~~~~-~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 451 EAAVVGVPDERWGERVVAVVVLKPGGD-AELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred eEEEEeCCCCccCceEEEEEEEcCCCC-CCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 999999999999999999999987632 01126899999999999999999999999999999999999999998875
No 24
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-68 Score=615.21 Aligned_cols=480 Identities=23% Similarity=0.297 Sum_probs=396.1
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+||++|+++. .+++||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 50 ~~~~~~~~~a~-~~pd~~Al~~~------~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~ 122 (549)
T PRK07788 50 PFAGLVAHAAR-RAPDRAALIDE------RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKV 122 (549)
T ss_pred hHHHHHHHHHH-HCCCceEEEEC------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 68899999998 89999999976 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++|+++... ..+....... ..+..++...... ..
T Consensus 123 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~-------~~ 182 (549)
T PRK07788 123 GARIILLNTGFSGPQLAEVAAREGVKALVYDDEFT---------DLLSALPPDL----GRLRAWGGNPDDD-------EP 182 (549)
T ss_pred CCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhH---------HHHHhhcccc----ccceEEEEecCcc-------cc
Confidence 99999999999999999999999999999986532 2221111111 1222222111110 00
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
.......|++........ .....+++.++|+|||||||+||||+++|++++ .........+++.++|+++...|++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~-~~~~~~~~~~~~~~~d~~~~~~p~~~ 259 (549)
T PRK07788 183 SGSTDETLDDLIAGSSTA--PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPL-APLAGLLSRVPFRAGETTLLPAPMFH 259 (549)
T ss_pred CCcCcccHHHHhcCCCCC--CCCCCCCCCcEEEECCCCCCCCCEEeccCccHH-HHHHHHHhhCCCCcCCeEEEccchHH
Confidence 011223455554432221 112346788999999999999999999999954 44445556678899999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++ ..++.++..|+++++... +++..+++.++++++|++.++|++++.|++.........++++||.+++|||+
T Consensus 260 ~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~ 334 (549)
T PRK07788 260 ATGW-AHLTLAMALGSTVVLRRR----FDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSA 334 (549)
T ss_pred HHHH-HHHHHHHHhCCEEEECCC----CCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCC
Confidence 9885 457788999999988742 48999999999999999999999999998875432244568899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecC
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~ 600 (759)
++++++++|.+.++ .+++|.||+||++...+... ......++++|+|++|++++|+|+++++++.|+.|||+|+|
T Consensus 335 l~~~~~~~~~~~~~---~~l~~~YG~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g- 409 (549)
T PRK07788 335 LSPELATRALEAFG---PVLYNLYGSTEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGN- 409 (549)
T ss_pred CCHHHHHHHHHHhC---ccceeccCcchhchhhccCh-hhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeC-
Confidence 99999999999987 67999999999986544322 11224567899999999999999999999999999999999
Q ss_pred CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEe
Q 004348 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVG 661 (759)
Q Consensus 601 ~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 661 (759)
+.++.||+++++. . ..+|||+|||+++ +|+||+|.|||++|.+||+|.+|+|++
T Consensus 410 -~~~~~gY~~~~~~---~---~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~ 482 (549)
T PRK07788 410 -GFPFEGYTDGRDK---Q---IIDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIG 482 (549)
T ss_pred -CCccccccCCCcc---c---ccCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEEC
Confidence 8899999998865 1 1378999999987 899999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHH
Q 004348 662 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKI 730 (759)
Q Consensus 662 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~ 730 (759)
++++..++.++|||+++++...+ .++|+++++++||.|++|..|+++++||+|++||++|++|+++
T Consensus 483 ~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 483 VDDEEFGQRLRAFVVKAPGAALD---EDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred CcCcccccEEEEEEEeCCCCCCC---HHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99988889999999998765444 5789999999999999999999999999999999999999863
No 25
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-67 Score=625.58 Aligned_cols=464 Identities=21% Similarity=0.311 Sum_probs=385.9
Q ss_pred HHHHHhhccccc--CCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 202 CYNCLDRNIEAG--LGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 202 ~~~~l~~~~~~~--~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+.++|.+++. . +||++|++.. +.+||+||+++++++|++|.++|+++||+|+|+++|++++++++|||++
T Consensus 6 ~~~~~~~~a~-~~~~pd~~a~~~~-------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 77 (705)
T PRK06060 6 LAGLLAEQAS-EAGWYDRPAFYAA-------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLA 77 (705)
T ss_pred HHHHHHHHHh-hccCCCceEEEec-------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 5677888776 4 7999999853 3799999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|++|.++.+++.+++++++++++|+++........ ..++.....
T Consensus 78 aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~---------------------~~~~~~~~~--------- 127 (705)
T PRK06060 78 RGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQP---------------------SRVAEAAEL--------- 127 (705)
T ss_pred hCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc---------------------cccchhhhh---------
Confidence 99999999999999999999999999999997643210000 000000000
Q ss_pred cCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
+.+.....+ .......+++++||+|||||||+||||+++|++++.+........+++.++|++++.+++.
T Consensus 128 --------~~~~~~~~~--~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 197 (705)
T PRK06060 128 --------MSEAARVAP--GGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMY 197 (705)
T ss_pred --------hhhccccCC--CCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccch
Confidence 000000000 0112345789999999999999999999999996544333334467889999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++...++.+|..|+++++.+.. .++..++.+++++++|+++++|+++..|++... ..++++||.+++|||
T Consensus 198 ~~~~~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~----~~~~~slr~i~~gGe 270 (705)
T PRK06060 198 FAYGLGNSVWFPLATGGSAVINSAP---VTPEAAAILSARFGPSVLYGVPNFFARVIDSCS----PDSFRSLRCVVSAGE 270 (705)
T ss_pred hhcchhHHHHHHHhcCCEEEEeCCC---CCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc----cccccceeEEEEecC
Confidence 9988767788999999999997532 478889999999999999999999999887542 235789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEec
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g 599 (759)
+++++++++|.+.++ +++++|.||+||++.+....... ..+.+++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 271 ~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g 346 (705)
T PRK06060 271 ALELGLAERLMEFFG--GIPILDGIGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRG 346 (705)
T ss_pred cCCHHHHHHHHHHcC--CCceEeeeeccccCceEEeccCC--CCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEcc
Confidence 999999999999987 47899999999998654432211 23567899999999999999999999999999999999
Q ss_pred CCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEE
Q 004348 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVV 660 (759)
Q Consensus 600 ~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv 660 (759)
+++++||||+++.+. ..+|||+|||+|+ +|+||+|.|||++|.+||.|.+|+|+
T Consensus 347 --~~v~~GY~~~~~~~~-----~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv 419 (705)
T PRK06060 347 --PAIAKGYWNRPDSPV-----ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVV 419 (705)
T ss_pred --chhhhhhhCCCcccc-----cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 899999999998642 2478999999988 89999999999999999999999999
Q ss_pred eEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHH
Q 004348 661 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIA 731 (759)
Q Consensus 661 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~ 731 (759)
++++...++.+++||++.++...+.+..++|+++|+++||.||+|..|+++++||+|+|||+||++|++.+
T Consensus 420 ~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 420 AVRESTGASTLQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred eecCccCCeeEEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 99988888899999998766544444467899999999999999999999999999999999999999865
No 26
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.6e-66 Score=610.91 Aligned_cols=506 Identities=24% Similarity=0.312 Sum_probs=406.3
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCC--CCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEAND--PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~--~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
+++++|+++++ .+||++|+++.... .+..+++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+
T Consensus 26 t~~~~l~~~a~-~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~ 104 (632)
T PRK07529 26 STYELLSRAAA-RHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGE 104 (632)
T ss_pred CHHHHHHHHHH-HCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 57899999998 89999999974221 1236789999999999999999999999999999999999999999999999
Q ss_pred HhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccc-c
Q 004348 279 RIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE-N 357 (759)
Q Consensus 279 kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-~ 357 (759)
++| +++|++|.++.+++.+++++++++++|+++.... ..+.+.+....... +.++.++.++........ .
T Consensus 105 ~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~ 175 (632)
T PRK07529 105 AAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPG----TDIWQKVAEVLAAL----PELRTVVEVDLARYLPGPKR 175 (632)
T ss_pred HhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCC----chHHHHHHHHHhcC----CcceeEEEecCccccccccc
Confidence 999 5799999999999999999999999999876421 11222232333322 455666655432100000 0
Q ss_pred --ccc----CCCCccchhhhcCCCCCC--CCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCC
Q 004348 358 --TKW----QDGRDIWWQDVVPKYPTK--CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS 429 (759)
Q Consensus 358 --~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~ 429 (759)
... .......|.+.+...+.. .......++++++|+|||||||.||||+++|++++ .........+++.++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~-~~~~~~~~~~~~~~~ 254 (632)
T PRK07529 176 LAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEV-ANAWLGALLLGLGPG 254 (632)
T ss_pred ccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHH-HHHHHHHHhcCCCCC
Confidence 000 111233455544433221 11223467999999999999999999999999954 445555566788999
Q ss_pred cEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCC---hhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccC
Q 004348 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD---SGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRY 506 (759)
Q Consensus 430 d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d---~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~ 506 (759)
|++++..|++|..++...++.+|..|+++++.+.... .+ ...++++|+++++|++.++|+++..|++... ...
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~-~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~~ 330 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGY-RGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV---DGH 330 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCcccc-CcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc---cCC
Confidence 9999999999998877788999999999999754211 12 3679999999999999999999999988653 234
Q ss_pred CCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEE--ECCCC
Q 004348 507 SRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVI--VDEKG 584 (759)
Q Consensus 507 ~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~I--vD~~g 584 (759)
++++||.+++||+++++++.++|.+.++ ++++|.||+||++.++...... ...+.+++|+|++++.++| +|+++
T Consensus 331 ~~~slr~v~~gg~~l~~~l~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d~~g 406 (632)
T PRK07529 331 DISSLRYALCGAAPLPVEVFRRFEAATG---VRIVEGYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILDDAG 406 (632)
T ss_pred CccceEEEEEcCCCCCHHHHHHHHHHhC---CcEeeeecccccCcccccCCcc-ccccCCCcccccCCceEEEEEcCCCC
Confidence 7899999999999999999999999887 7899999999998765443222 2346789999999999888 47777
Q ss_pred ---cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHH
Q 004348 585 ---VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTA 642 (759)
Q Consensus 585 ---~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~ 642 (759)
++++.|+.|||+|+| |+++.||++++ .+...|+ .+|||+|||+|+ +|+||+|.
T Consensus 407 ~~~~~~~~g~~Gel~v~g--p~v~~GY~~~~-~~~~~~~--~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~ 481 (632)
T PRK07529 407 RYLRDCAVDEVGVLCIAG--PNVFSGYLEAA-HNKGLWL--EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPA 481 (632)
T ss_pred cccccCCCCCceEEEEEC--CCccccccCCc-ccccccc--CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHH
Confidence 889999999999999 89999999865 3444454 378999999998 89999999
Q ss_pred HHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcC-CCccccEEEEeCCCCCCCCCc
Q 004348 643 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIG-AFAAPDKIHWAPGLPKTRSGK 721 (759)
Q Consensus 643 eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp-~~~vP~~iv~v~~lP~T~~GK 721 (759)
|||++|.+||+|.+|+|++++++..++.++|||+++++...+ .++|+++++++|+ .+++|+.|+++++||+|++||
T Consensus 482 eIE~~l~~~p~V~~a~vvg~~d~~~ge~~~a~v~l~~~~~~~---~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GK 558 (632)
T PRK07529 482 AIEEALLRHPAVALAAAVGRPDAHAGELPVAYVQLKPGASAT---EAELLAFARDHIAERAAVPKHVRILDALPKTAVGK 558 (632)
T ss_pred HHHHHHHhCCCeeEEEEEeccCCCCCceeEEEEEEcCCCCCC---HHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCc
Confidence 999999999999999999999988899999999998776544 5689999999997 579999999999999999999
Q ss_pred ccHHHHHHHHhc
Q 004348 722 IMRRILRKIASR 733 (759)
Q Consensus 722 vdR~~L~~~~~~ 733 (759)
|+|++|++.+..
T Consensus 559 i~r~~Lr~~~~~ 570 (632)
T PRK07529 559 IFKPALRRDAIR 570 (632)
T ss_pred ccHHHHHHHHHH
Confidence 999999987654
No 27
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.8e-66 Score=600.06 Aligned_cols=492 Identities=24% Similarity=0.329 Sum_probs=404.8
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+|+++|+++.+...+..+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 25 ~l~~~l~~~a~-~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~ 103 (547)
T PRK13295 25 TINDDLDACVA-SCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRI 103 (547)
T ss_pred CHHHHHHHHHH-HCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 57889999988 89999999986432233489999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++.+++++++++++|+++.... ....+.+.+....+ +.+..++.++....
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 167 (547)
T PRK13295 104 GAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRG----FDHAAMARRLRPEL----PALRHVVVVGGDGA-------- 167 (547)
T ss_pred CcEEeccccccCHHHHHHHHHhcCceEEEEeccccC----cchHHHHHHHhhhC----CCcceEEEecCCCc--------
Confidence 999999999999999999999999999999876421 11112222222222 34455554432210
Q ss_pred CCCCccchhhhcCC--------CCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEE
Q 004348 361 QDGRDIWWQDVVPK--------YPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 432 (759)
Q Consensus 361 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~ 432 (759)
..|.+.... .+.........++++++|+|||||||.||||+++|++++.+ .......+++.++|++
T Consensus 168 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~ 241 (547)
T PRK13295 168 -----DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMAN-IVPYAERLGLGADDVI 241 (547)
T ss_pred -----cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHH-HHHHHHHhCCCCCCeE
Confidence 112111110 00111122346789999999999999999999999996544 4445566889999999
Q ss_pred EEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCee
Q 004348 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (759)
Q Consensus 433 l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr 512 (759)
++..|++|..++.+.++.+|..|+++++.+. .++..+++.++++++|++.++|+++..|..... ....++++||
T Consensus 242 l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~--~~~~~~~~l~ 315 (547)
T PRK13295 242 LMASPMAHQTGFMYGLMMPVMLGATAVLQDI----WDPARAAELIRTEGVTFTMASTPFLTDLTRAVK--ESGRPVSSLR 315 (547)
T ss_pred EEecCchhhhhHHHHHHHHHHcCCeEEeCCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhccc--ccCCCcccce
Confidence 9999999999888889999999999998753 489999999999999999999999999887643 2234678999
Q ss_pred EEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCce
Q 004348 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS 592 (759)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~ 592 (759)
.+++||+++++++++++.+.++ ++++|.||+||++.+.+............++|+|+++++++|+|+++++++.|+.
T Consensus 316 ~~~~~G~~l~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~ 392 (547)
T PRK13295 316 TFLCAGAPIPGALVERARAALG---AKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI 392 (547)
T ss_pred EEEEecCCCCHHHHHHHHHHhC---CCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC
Confidence 9999999999999999999886 7899999999998755433221112234678999999999999999999999999
Q ss_pred EEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCc
Q 004348 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQ 653 (759)
Q Consensus 593 GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~ 653 (759)
|||+|+| ++++.||+++++.+... .+|||+|||+|+ +|+||+|.|||++|.+|+.
T Consensus 393 Gel~v~g--~~~~~gY~~~~~~t~~~----~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~ 466 (547)
T PRK13295 393 GRLQVRG--CSNFGGYLKRPQLNGTD----ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPA 466 (547)
T ss_pred CeEEEEc--CcccccccCCccccccC----CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCC
Confidence 9999999 89999999999887654 478999999988 8999999999999999999
Q ss_pred cceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHh-hcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 654 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 654 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~-~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
|.+++|++++++..++.++++|++.++...+ .+++++++++ +|++||+|..|+++++||+|.+||++|++|++++.
T Consensus 467 v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~ 543 (547)
T PRK13295 467 IAQVAIVAYPDERLGERACAFVVPRPGQSLD---FEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLR 543 (547)
T ss_pred eeeEEEEeeecCCCCcEEEEEEEeCCCCCCC---HHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHh
Confidence 9999999999988889999999988764433 4678888986 79999999999999999999999999999999886
Q ss_pred c
Q 004348 733 R 733 (759)
Q Consensus 733 ~ 733 (759)
+
T Consensus 544 ~ 544 (547)
T PRK13295 544 G 544 (547)
T ss_pred c
Confidence 4
No 28
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.9e-66 Score=603.29 Aligned_cols=496 Identities=20% Similarity=0.188 Sum_probs=391.5
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ ++|+++|+++. ++++||+||.++++++|++|.++|+++||+|+|+++|++++++++|||+++
T Consensus 8 ~~~~~~~~~~~-~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~ 80 (563)
T PLN02860 8 HICQCLTRLAT-LRGNAVVTISG------NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACA 80 (563)
T ss_pred HHHHHHHHHHH-hcCCceEEecC------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhc
Confidence 57888999998 89999999865 578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHH-HHHhhcCCCccEEEEeccCccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAAL-DECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
|++++||+|.++.+++.+++++++++++++++.... ...... ..+ +.+..++..+.... ...
T Consensus 81 Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~----~~~~~~i~~~~~~~----~~~ 143 (563)
T PLN02860 81 GGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSS---------WYEELQNDRL----PSLMWQVFLESPSS----SVF 143 (563)
T ss_pred cEEEEeCCcccCHHHHHHHHHhcCceEEEEecccch---------HHHHHhhccC----CceeEEEEecCccc----ccc
Confidence 999999999999999999999999999999875321 111110 011 22333333322110 000
Q ss_pred cCCCCccchhhhcCCC-CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCc
Q 004348 360 WQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l 438 (759)
......+.+++..... ..........++++++|+|||||||.||||+++|++++.+. ......+++.++|+++..+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~-~~~~~~~~~~~~d~~l~~~pl 222 (563)
T PLN02860 144 IFLNSFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQS-LAKIAIVGYGEDDVYLHTAPL 222 (563)
T ss_pred cchhhccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHH-HHHHhhcCCCCCCEEEEecCc
Confidence 0000001111111110 00011112457899999999999999999999999965443 334456789999999999999
Q ss_pred chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 439 ~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
+|+.++ ..++.+|+.|+++++.+. +++..+++.|+++++|++.++|+++..|++..........+++||.+++||
T Consensus 223 ~h~~g~-~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG 297 (563)
T PLN02860 223 CHIGGL-SSALAMLMVGACHVLLPK----FDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGG 297 (563)
T ss_pred hhhccH-HHHHHHHHcCceEEecCC----CCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCC
Confidence 999986 467899999999999753 489999999999999999999999999987643222234678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC--------------------C-CCCCCCcCCCCCCceE
Q 004348 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--------------------W-PQKPGSATFPFFGVQP 577 (759)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~--------------------~-~~~~~~iG~p~~g~~~ 577 (759)
++++++++++|.+.++ ++++++.||+||++..++...... . .....++|+|++++++
T Consensus 298 ~~l~~~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v 375 (563)
T PLN02860 298 GSLSSRLLPDAKKLFP--NAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVEL 375 (563)
T ss_pred CcCCHHHHHHHHHhcC--CCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEE
Confidence 9999999999999986 488999999999976443211100 0 0112368999999999
Q ss_pred EEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEe
Q 004348 578 VIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHR 638 (759)
Q Consensus 578 ~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~r 638 (759)
+|+|++ .|+.|||+|+| |+++.|||++++.+...+.. +|||+|||+|+ +|++
T Consensus 376 ~i~~~~-----~g~~Gel~v~g--~~~~~GY~~~~~~t~~~~~~--~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~ 446 (563)
T PLN02860 376 KIGLDE-----SSRVGRILTRG--PHVMLGYWGQNSETASVLSN--DGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGEN 446 (563)
T ss_pred EEecCC-----CCceeEEEEec--CcccccccCCccccchhccC--CCeEEccceEEEcCCCCEEEeecccceeEECCEE
Confidence 999876 57899999999 89999999999988877643 78999999988 8999
Q ss_pred eCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCC-----------cHHHHHHHHHHHHh-hcCCCcccc
Q 004348 639 IGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY-----------SEELRKSLVLAVRK-QIGAFAAPD 706 (759)
Q Consensus 639 I~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~-----------~~~l~~~l~~~l~~-~Lp~~~vP~ 706 (759)
|+|.|||++|.+||+|.+|+|++++++..++.++|+|+++++... .....++|++++++ +|++|++|+
T Consensus 447 v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~ 526 (563)
T PLN02860 447 VYPEEVEAVLSQHPGVASVVVVGVPDSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPK 526 (563)
T ss_pred ccHHHHHHHHHhCCCcceeEEEEEecCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccce
Confidence 999999999999999999999999998889999999998865210 01125688999987 599999999
Q ss_pred EEEEe-CCCCCCCCCcccHHHHHHHHhcccCC
Q 004348 707 KIHWA-PGLPKTRSGKIMRRILRKIASRQLDE 737 (759)
Q Consensus 707 ~iv~v-~~lP~T~~GKvdR~~L~~~~~~~~~~ 737 (759)
.|+++ ++||+|++|||+|++|++++.+..+.
T Consensus 527 ~~~~~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 558 (563)
T PLN02860 527 LFVQWRKPFPLTTTGKIRRDEVRREVLSHLQS 558 (563)
T ss_pred EEEEEecCCCCCcccchhHHHHHHHHHHHHhc
Confidence 98775 67999999999999999998876554
No 29
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-65 Score=590.67 Aligned_cols=474 Identities=23% Similarity=0.284 Sum_probs=389.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|.++++ ++||++|+++. .+.+||+||+++++++|++|.++|+++||+|+++++|++++++++|||+++
T Consensus 44 ~~~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 116 (537)
T PRK13382 44 GPTSGFAIAAQ-RCPDRPGLIDE------LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRI 116 (537)
T ss_pred CHHHHHHHHHH-hCCCCeEEEeC------CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHc
Confidence 47788999998 89999999965 578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++.+++++++++++|++.... ..+....... +....++.+....
T Consensus 117 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~--------- 174 (537)
T PRK13382 117 GADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS---------ATVDRALADC----PQATRIVAWTDED--------- 174 (537)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH---------HHHHHHHhhc----cccceEEEecCCc---------
Confidence 99999999999999999999999999999976532 2222222211 2222233222110
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
....+++......... ....+++.++|+|||||||+||||+++|++++. ........+.+..+++++...|++|
T Consensus 175 ---~~~~~~~~~~~~~~~~--~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~ 248 (537)
T PRK13382 175 ---HDLTVEVLIAAHAGQR--PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIG-TLKAILDRTPWRAEEPTVIVAPMFH 248 (537)
T ss_pred ---ccccHHHHhhccCcCC--CCCCCCCCeEEEECCCCCCCCCEEEeccchHHH-HHHHHHHhhCCCCCCeEEEecChHh
Confidence 0122332222211111 123468899999999999999999999988543 3444555677888999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++ ..++.++..|+++++... ++++.+++.|+++++|++..+|++++.|++.........+++++|.+++|||+
T Consensus 249 ~~g~-~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~ 323 (537)
T PRK13382 249 AWGF-SQLVLAASLACTIVTRRR----FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSR 323 (537)
T ss_pred hhHH-HHHHHHHhcCcEEEECCC----cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCC
Confidence 9886 578889999999988642 58999999999999999999999999998765332234456789999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecC
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~ 600 (759)
++++++++|.+.+| .+++|.||+||++.+++.... .....++++|+|++|+.++|+|++++++|.|+.|||+|+|
T Consensus 324 l~~~~~~~~~~~~~---~~i~~~YG~TE~~~~~~~~~~-~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g- 398 (537)
T PRK13382 324 MRPDVVIAFMDQFG---DVIYNNYNATEAGMIATATPA-DLRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRN- 398 (537)
T ss_pred CCHHHHHHHHHHcC---CcEEecccccccCcceecChh-HhccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEc-
Confidence 99999999999987 579999999999876543321 1134567899999999999999999999999999999999
Q ss_pred CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEe
Q 004348 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVG 661 (759)
Q Consensus 601 ~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 661 (759)
|+++.||+ ++.+.. + .+|||+|||+++ +|+||+|.|||++|.+||+|.+++|++
T Consensus 399 -~~~~~gY~--~~~~~~-~---~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~ 471 (537)
T PRK13382 399 -DTQFDGYT--SGSTKD-F---HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIG 471 (537)
T ss_pred -CCcccCcc--ccchhh-c---cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEc
Confidence 89999998 444432 2 268999999988 899999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 662 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 662 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
++++..++.+++||++.++.... .++|+++++++|+.|++|..++++++||+|++||++|++|++
T Consensus 472 ~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 472 VDDEQYGQRLAAFVVLKPGASAT---PETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred cCccccCCEEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 99887889999999987664433 578999999999999999999999999999999999999874
No 30
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.1e-66 Score=594.78 Aligned_cols=480 Identities=18% Similarity=0.167 Sum_probs=378.3
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+++.+.|.+.++ ++|+++|+.+.. .+++||+||.++++++|+.|.+ .+||+|+|+++|++++++++|||++
T Consensus 19 ~~~~~~~~~~~~-~~p~~~a~~~~~-----~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~ 89 (539)
T PRK06334 19 KTVLESFLKLCS-EMTTATVCWDEQ-----LGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLL 89 (539)
T ss_pred CcHHHHHHHHHH-hCCCceEEEeCC-----CCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHh
Confidence 367888999998 899999998642 3689999999999999999987 3899999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|++|.++.+++.++|+++++++||++++.. ..+.+..... . .....+++++....
T Consensus 90 ~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~--~-~~~~~~i~~~~~~~------- 150 (539)
T PRK06334 90 SGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLM---------QHLAQTHGED--A-EYPFSLIYMEEVRK------- 150 (539)
T ss_pred cCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHH---------HHHhhhhhcc--c-cccccEEEEehhhh-------
Confidence 999999999999999999999999999999875431 1111111000 0 00112333322100
Q ss_pred cCCCCccchhhhcC-----CCC-----CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCC
Q 004348 360 WQDGRDIWWQDVVP-----KYP-----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS 429 (759)
Q Consensus 360 ~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~ 429 (759)
...+.+... ..+ .........++++++|+|||||||.||||+++|++++.+ .......++++++
T Consensus 151 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~ 224 (539)
T PRK06334 151 -----ELSFWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLAN-QRACLKFFSPKED 224 (539)
T ss_pred -----hccHHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHH-HHHHHHhcCCCCC
Confidence 000000000 000 001112356799999999999999999999999995544 4445566888999
Q ss_pred cEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCC
Q 004348 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK 509 (759)
Q Consensus 430 d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~ 509 (759)
|++++.+|++|.+++...++.+|..|+++++.... +++..+++.|+++++|++.++|++++.|++... ....+++
T Consensus 225 d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~ 299 (539)
T PRK06334 225 DVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNP---LYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAK--KQESCLP 299 (539)
T ss_pred ceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhh--hcccccc
Confidence 99999999999998777788999999999886432 489999999999999999999999999987643 2234678
Q ss_pred CeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECC-CCcccC
Q 004348 510 SLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIE 588 (759)
Q Consensus 510 sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~-~g~~vp 588 (759)
+||.+++||+++++++++++.+.++ ++.+++.||+||++.+++..... .....+++|+|++|++++|+|+ ++++++
T Consensus 300 ~lr~i~~gG~~l~~~~~~~~~~~~~--~~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d~~~~~~~~ 376 (539)
T PRK06334 300 SLRFVVIGGDAFKDSLYQEALKTFP--HIQLRQGYGTTECSPVITINTVN-SPKHESCVGMPIRGMDVLIVSEETKVPVS 376 (539)
T ss_pred cccEEEECCccCCHHHHHHHHHHCC--CCeEEecccccccCceEEeccCC-CCCCCCcCceecCCCEEEEEcCCCCccCC
Confidence 9999999999999999999999886 48899999999998765543222 1234567999999999999996 589999
Q ss_pred CCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHh
Q 004348 589 GECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALV 649 (759)
Q Consensus 589 ~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~ 649 (759)
.|+.|||+|+| +++++|||++++.+.... .+.+|||+|||+|+ +|+||+|.|||++|.
T Consensus 377 ~g~~Gel~v~g--~~~~~GY~~~~~~~~~~~-~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~ 453 (539)
T PRK06334 377 SGETGLVLTRG--TSLFSGYLGEDFGQGFVE-LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILM 453 (539)
T ss_pred CCceEEEEEec--CcccccccCCccccccee-eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHH
Confidence 99999999999 899999999998543211 22467999999998 899999999999999
Q ss_pred cCCccce------EEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh-cCCCccccEEEEeCCCCCCCCCcc
Q 004348 650 SHPQCAE------AAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKI 722 (759)
Q Consensus 650 ~~p~V~e------a~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~vP~~iv~v~~lP~T~~GKv 722 (759)
+||+|.+ ++|++.+++ ...+++|++.. . + .++|+++|+++ ++.||+|+.|+++++||+|++|||
T Consensus 454 ~~~~v~~~~~~~~~~v~~~~~~--~~~~~~~~~~~--~--~---~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi 524 (539)
T PRK06334 454 EGFGQNAADHAGPLVVCGLPGE--KVRLCLFTTFP--T--S---ISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKP 524 (539)
T ss_pred HccCCccccccCceEEEcCCCC--ceEEEEEEecc--C--C---hHHHHHHHHhcCCcccccchheeeecccccccCCcc
Confidence 9999998 777777643 24566666532 1 1 46788889886 789999999999999999999999
Q ss_pred cHHHHHHHHhc
Q 004348 723 MRRILRKIASR 733 (759)
Q Consensus 723 dR~~L~~~~~~ 733 (759)
||++|++++..
T Consensus 525 ~r~~L~~~~~~ 535 (539)
T PRK06334 525 DYCSLNALAKS 535 (539)
T ss_pred cHHHHHHHHHH
Confidence 99999998654
No 31
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.3e-66 Score=608.26 Aligned_cols=507 Identities=18% Similarity=0.204 Sum_probs=389.2
Q ss_pred cHHHHHHhhcccccCCCeEEEEEE---cCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWE---ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 276 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA 276 (759)
.+++++|+++++ ++||++|+.+. +...+..+.+||+||+++++++|++|+++|+++||+|+|+++|++||++++||
T Consensus 44 ~tl~~~l~~~a~-~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 122 (651)
T PLN02736 44 GTLHDNFVYAVE-TFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHA 122 (651)
T ss_pred CCHHHHHHHHHH-hCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 468899999998 89999999642 11112246799999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccc
Q 004348 277 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 356 (759)
Q Consensus 277 ~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 356 (759)
|+++|++++|+++.++.+++.++|++++++++|+++... +.+......+ +.++.+++.+........
T Consensus 123 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~---------~~~~~~~~~~----~~l~~ii~~~~~~~~~~~ 189 (651)
T PLN02736 123 CSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTL---------NTLLSCLSEI----PSVRLIVVVGGADEPLPS 189 (651)
T ss_pred HHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHH---------HHHHHHhhcC----CCceEEEEECCCchhhhh
Confidence 999999999999999999999999999999999975431 2222222222 455666655321100000
Q ss_pred ccccCCCCccchhhhcCCCCC-CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEe
Q 004348 357 NTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCT 435 (759)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~ 435 (759)
...........|++.+..... ..+.....++|+++|+|||||||.||||++||++++ .........+++.++|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~-~~~~~~~~~~~~~~~d~~l~~ 268 (651)
T PLN02736 190 LPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLI-ANVAGSSLSTKFYPSDVHISY 268 (651)
T ss_pred hhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHH-HHHHHHHhccCCCCCCEEEEe
Confidence 000000112345554432211 112234568999999999999999999999999954 445555566788999999999
Q ss_pred cCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcc-------------
Q 004348 436 ADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY------------- 502 (759)
Q Consensus 436 ~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~------------- 502 (759)
+|++|++++. .++.+|..|+++++.+. ++..+++.|+++++|+++++|+++..|.+.....
T Consensus 269 lPl~h~~~~~-~~~~~l~~G~~i~~~~~-----~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (651)
T PLN02736 269 LPLAHIYERV-NQIVMLHYGVAVGFYQG-----DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFN 342 (651)
T ss_pred CCHHHHHHHH-HHHHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 9999999864 67889999999998753 6788999999999999999999998876531000
Q ss_pred ----------------c---c-------cCCC-CCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecc
Q 004348 503 ----------------V---T-------RYSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMIT 555 (759)
Q Consensus 503 ----------------~---~-------~~~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~ 555 (759)
. . +..+ ++||.+++||+++++++++++.+.+| +++++.||+||+++.++.
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g---~~~~~~YG~TE~~~~~~~ 419 (651)
T PLN02736 343 AAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG---GRVLEGYGMTETSCVISG 419 (651)
T ss_pred HHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC---CCeEEEechHHhchheec
Confidence 0 0 0012 48999999999999999999998887 789999999999875543
Q ss_pred cCCCCCCCCCCCcCCCCCCceEEEECC-CCc---ccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCC
Q 004348 556 PLPGAWPQKPGSATFPFFGVQPVIVDE-KGV---EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGD 631 (759)
Q Consensus 556 ~~~~~~~~~~~~iG~p~~g~~~~IvD~-~g~---~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGD 631 (759)
.... ....+++|+|++|++++|+|. ++. ...++..|||+|+| |+++.|||++|+.+.+.|.. +|||+|||
T Consensus 420 ~~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrg--p~v~~GY~~~~~~t~~~~~~--dgw~~TGD 493 (651)
T PLN02736 420 MDEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRG--PIIFKGYYKDEVQTREVIDE--DGWLHTGD 493 (651)
T ss_pred cCCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecC--CccccccccCHHHHHhhhcc--CCCeeccc
Confidence 3322 245688999999999999983 322 12233469999999 89999999999999887743 79999999
Q ss_pred eee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCC----------C
Q 004348 632 GCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG----------V 681 (759)
Q Consensus 632 l~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~----------~ 681 (759)
+|+ +|++|+|.|||++|.+||.|.+|+|++. ..++.++|+|+++++ .
T Consensus 494 lg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~~~~~~~~~~~~~ 570 (651)
T PLN02736 494 IGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDPEVLKAWAASEGI 570 (651)
T ss_pred eEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCHHHHHHHHHHcCC
Confidence 998 5999999999999999999999999973 246789999998653 1
Q ss_pred CC--------cHHHHHHHHHHHH-----hhcCCCccccEEEEeCCCC------CCCCCcccHHHHHHHHhcccCCCC
Q 004348 682 PY--------SEELRKSLVLAVR-----KQIGAFAAPDKIHWAPGLP------KTRSGKIMRRILRKIASRQLDELG 739 (759)
Q Consensus 682 ~~--------~~~l~~~l~~~l~-----~~Lp~~~vP~~iv~v~~lP------~T~~GKvdR~~L~~~~~~~~~~~~ 739 (759)
+. .+++.+.|.+.+. ++|+.|++|++|+++++.| +|++|||+|++|++.+.+++++++
T Consensus 571 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~~y 647 (651)
T PLN02736 571 KYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISDMY 647 (651)
T ss_pred CccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHHHH
Confidence 10 1112223333332 2599999999999999987 799999999999999988877665
No 32
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.7e-65 Score=591.26 Aligned_cols=489 Identities=22% Similarity=0.324 Sum_probs=393.3
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
+.+..+|++ + .+|+++|+++.. ...++||+||.++++++|++|++ .|+++||+|+|+++|++++++++|||+
T Consensus 41 ~~~~~l~~~--~-~~~~~~a~~~~~----~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~ 113 (560)
T PLN02574 41 DAVSFIFSH--H-NHNGDTALIDSS----TGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVL 113 (560)
T ss_pred CHHHHHhcC--c-ccCCCCEEEECC----CCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHH
Confidence 455666765 4 699999999752 13479999999999999999999 999999999999999999999999999
Q ss_pred HhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccc
Q 004348 279 RIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENT 358 (759)
Q Consensus 279 kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 358 (759)
++|++++|++|.++.+++.++++++++++++++.+.. .. +... ... ++.+..... .
T Consensus 114 ~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~----~~~~-----~~~-~~~~~~~~~-----~ 169 (560)
T PLN02574 114 SLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENV---------EK----LSPL-----GVP-VIGVPENYD-----F 169 (560)
T ss_pred HhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHH---------HH----HHhc-----CCc-EEecCcccc-----c
Confidence 9999999999999999999999999999999976421 11 1111 111 222211100 0
Q ss_pred ccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---HHhCC-CCCcEEEE
Q 004348 359 KWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDY-KPSDVYWC 434 (759)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~l-~~~d~~l~ 434 (759)
.........|.+.+.......+.....++++++|+|||||||.||||+++|++++.+...... ..+.. ..+++++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 249 (560)
T PLN02574 170 DSKRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLA 249 (560)
T ss_pred ccCccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEE
Confidence 000001122333333222222223456789999999999999999999999996544322211 11222 34678899
Q ss_pred ecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEE
Q 004348 435 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVL 514 (759)
Q Consensus 435 ~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v 514 (759)
.+|++|..++...++.++..|+++++.+. +++..+++.|++|++|++.++|++++.|++.... ....++++||.+
T Consensus 250 ~~pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~~lr~~ 324 (560)
T PLN02574 250 ALPMFHIYGLSLFVVGLLSLGSTIVVMRR----FDASDMVKVIDRFKVTHFPVVPPILMALTKKAKG-VCGEVLKSLKQV 324 (560)
T ss_pred ecchHHHHHHHHHHHHHHhcCCEEEEecC----CCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccc-cccCccccceEE
Confidence 99999999877777788899999998753 4899999999999999999999999999886432 123568899999
Q ss_pred EEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC-CCCcccCCCceE
Q 004348 515 GSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGECSG 593 (759)
Q Consensus 515 ~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD-~~g~~vp~g~~G 593 (759)
++||++++++++++|.+.++ ++++++.||+||++.+.+...........+++|+|++|++++|+| +++++++.|+.|
T Consensus 325 ~~gg~~l~~~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~G 402 (560)
T PLN02574 325 SCGAAPLSGKFIQDFVQTLP--HVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCG 402 (560)
T ss_pred EEecccCCHHHHHHHHHHCC--CCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCe
Confidence 99999999999999999886 488999999999986554322222224567899999999999999 689999999999
Q ss_pred EEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCcc
Q 004348 594 YLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQC 654 (759)
Q Consensus 594 EL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V 654 (759)
||+|+| ++++.|||++++.+.+.|.. +|||+|||+|+ +|++|++.|||++|.+||+|
T Consensus 403 ei~v~g--~~~~~GY~~~~~~t~~~~~~--~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V 478 (560)
T PLN02574 403 ELWIQG--PGVMKGYLNNPKATQSTIDK--DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEI 478 (560)
T ss_pred EEEEEC--cchhhhhcCChhHhhhhccC--CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCc
Confidence 999999 89999999999999887653 78999999987 89999999999999999999
Q ss_pred ceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 655 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 655 ~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
.|++|++++++..++.+++||+.+++...+ .++|+++++++|++|++|+.++++++||+|++|||+|+.|++.+.+
T Consensus 479 ~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~ 554 (560)
T PLN02574 479 IDAAVTAVPDKECGEIPVAFVVRRQGSTLS---QEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTN 554 (560)
T ss_pred ceEEEEccccCCCCcceEEEEEeCCCCCCC---HHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhh
Confidence 999999999888888999999987655443 4789999999999999999999999999999999999999998864
No 33
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.9e-64 Score=583.50 Aligned_cols=486 Identities=24% Similarity=0.348 Sum_probs=399.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.+++.++++ .+||++|+++.. .++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 24 ~~~~~l~~~~~-~~~~~~a~~~~~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~ 98 (537)
T PLN02246 24 PLHDYCFERLS-EFSDRPCLIDGA----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRR 98 (537)
T ss_pred cHHHHHHHHHH-hCCCCeEEEecC----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 47788888888 899999998652 2478999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++..++++++++++|+++... ..+.+.... ..+ .++.++...
T Consensus 99 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~-----~~~-~~i~~~~~~--------- 154 (537)
T PLN02246 99 GAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYV---------DKLKGLAED-----DGV-TVVTIDDPP--------- 154 (537)
T ss_pred CEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHHHHhhc-----CCc-eEEEeCCCC---------
Confidence 99999999999999999999999999999976532 112111110 122 233333211
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---HHhCCCCCcEEEEecC
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTAD 437 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~ 437 (759)
.....+.+.........+.....++++++|+|||||||.||||+++|++++.+...... ..+++.++|+++..+|
T Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p 232 (537)
T PLN02246 155 --EGCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLP 232 (537)
T ss_pred --CCceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeec
Confidence 00112233322222222233456899999999999999999999999996554332221 2467889999999999
Q ss_pred cchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEe
Q 004348 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (759)
Q Consensus 438 l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~g 517 (759)
++|..++...++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++... ....+++++|.+++|
T Consensus 233 l~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~~~~~~lr~~~~g 306 (537)
T PLN02246 233 MFHIYSLNSVLLCGLRVGAAILIMPK----FEIGALLELIQRHKVTIAPFVPPIVLAIAKSPV--VEKYDLSSIRMVLSG 306 (537)
T ss_pred hHHHHHHHHHHHHHHhcCCEEEEeCC----CCHHHHHHHHHHhCceEEEcchHHHHHHhcCcc--ccccCccceeEEEEe
Confidence 99998876778889999999999864 388999999999999999999999999987643 233467899999999
Q ss_pred CCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCC---CCCCCCCCCcCCCCCCceEEEECC-CCcccCCCceE
Q 004348 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP---GAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSG 593 (759)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~---~~~~~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~G 593 (759)
|+++++++.+++.+.++ +..+++.||+||++.+++.... .....+++++|+|+++++++|+|+ ++++++.|+.|
T Consensus 307 g~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~G 384 (537)
T PLN02246 307 AAPLGKELEDAFRAKLP--NAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPG 384 (537)
T ss_pred cCcCCHHHHHHHHHHcC--CCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCce
Confidence 99999999999999986 4789999999999865432211 112235678999999999999994 78999999999
Q ss_pred EEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCcc
Q 004348 594 YLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQC 654 (759)
Q Consensus 594 EL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V 654 (759)
||+|+| +.++.||+++++.+...|. .+|||+|||+|+ +|+||+|.|||++|.+||+|
T Consensus 385 el~v~g--~~~~~GY~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v 460 (537)
T PLN02246 385 EICIRG--PQIMKGYLNDPEATANTID--KDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSI 460 (537)
T ss_pred EEEEEC--CchhccccCCchhhhhccc--CCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCe
Confidence 999999 8999999999998877653 378999999988 89999999999999999999
Q ss_pred ceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 655 AEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 655 ~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
.+|+|++.++...++.++++|+..++...+ .++|+++|+++|++|++|..|+++++||+|++||++|++|++.+.
T Consensus 461 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~ 535 (537)
T PLN02246 461 ADAAVVPMKDEVAGEVPVAFVVRSNGSEIT---EDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLA 535 (537)
T ss_pred eEEEEEcccCccCCceeEEEEEeCCCCCCC---HHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHh
Confidence 999999998888888999999987665443 578999999999999999999999999999999999999998865
No 34
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-64 Score=582.38 Aligned_cols=496 Identities=24% Similarity=0.343 Sum_probs=404.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|++++. .+|+++|+++. ++.+||+||.++++++|..|.+. |+++||+|+|+++|++++++++|||++
T Consensus 11 tl~~~l~~~a~-~~~~~~a~~~~------~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 83 (546)
T PRK08314 11 SLFHNLEVSAR-RYPDKTAIVFY------GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILR 83 (546)
T ss_pred CHHHHHHHHHH-HcCCCcceeec------CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHH
Confidence 57888988888 89999999987 67899999999999999999999 999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccc---
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE--- 356 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~--- 356 (759)
+|++++|++|.++.+++.+++++++++++|+++... ..+......+ .+..+++..........
T Consensus 84 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 149 (546)
T PRK08314 84 ANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELA---------PKVAPAVGNL-----RLRHVIVAQYSDYLPAEPEI 149 (546)
T ss_pred cCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchh---------hhHHHHhhcc-----CcceEEEecchhhccccccc
Confidence 999999999999999999999999999999986642 1121111111 22233322110000000
Q ss_pred c-----------cccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC
Q 004348 357 N-----------TKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (759)
Q Consensus 357 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (759)
. ..........|++...... ..+.....++++++|+|||||||.||||+++|++++.+ .......++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~-~~~~~~~~~ 227 (546)
T PRK08314 150 AVPAWLRAEPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMAN-AVGSVLWSN 227 (546)
T ss_pred CcccccccccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHhhC
Confidence 0 0000112234544443221 12233456789999999999999999999999996554 444555688
Q ss_pred CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccccc
Q 004348 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (759)
Q Consensus 426 l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~ 505 (759)
+.++|++++..|++|..++.+.++.+|.+|+++++.+. +++..++++++++++|++.++|+++..++.... ...
T Consensus 228 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~--~~~ 301 (546)
T PRK08314 228 STPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPR----WDREAAARLIERYRVTHWTNIPTMVVDFLASPG--LAE 301 (546)
T ss_pred CCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCC----CCHHHHHHHHHHhcCceecccHHHHHHHHhCCC--ccc
Confidence 89999999999999999987888999999999999864 488999999999999999999999998887543 234
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECC-CC
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KG 584 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~-~g 584 (759)
.+++++|.+++||+++++++++++.+.++ +++++.||+||++......... ....+++|+|++|++++|+|+ ++
T Consensus 302 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~ 376 (546)
T PRK08314 302 RDLSSLRYIGGGGAAMPEAVAERLKELTG---LDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETL 376 (546)
T ss_pred cCchhhheeeeccccCCHHHHHHHHHHcC---CcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCC
Confidence 46789999999999999999999999887 7899999999998765433221 124578999999999999995 78
Q ss_pred cccCCCceEEEEEecCCCcccccccCChhhHHhhhcc-cCCcEEEeCCeee-------------------ccEeeCHHHH
Q 004348 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCS-------------------SGHRIGTAEV 644 (759)
Q Consensus 585 ~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~-~~~g~y~TGDl~~-------------------~G~rI~~~eI 644 (759)
++++.|..|||+|+| ++++.||+++++.+.+.|.. +..+||+|||+|+ +|+||+|.||
T Consensus 377 ~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eI 454 (546)
T PRK08314 377 EELPPGEVGEIVVHG--PQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEV 454 (546)
T ss_pred cCCCCCCceEEEEEC--CchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHH
Confidence 999999999999999 89999999999988877753 2345999999987 7999999999
Q ss_pred HHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccH
Q 004348 645 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMR 724 (759)
Q Consensus 645 E~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR 724 (759)
|++|.+||+|.+++|++.++...++.+++||+++++.... ...++|+++++++|++|++|..++++++||+|.|||++|
T Consensus 455 E~~i~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~~~~~~-~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r 533 (546)
T PRK08314 455 ENLLYKHPAIQEACVIATPDPRRGETVKAVVVLRPEARGK-TTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILW 533 (546)
T ss_pred HHHHHhCcchheEEEEeCCCcccCceeEEEEEECCCCCCC-CCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeH
Confidence 9999999999999999999888889999999988764321 114789999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 004348 725 RILRKIASR 733 (759)
Q Consensus 725 ~~L~~~~~~ 733 (759)
++|++...+
T Consensus 534 ~~L~~~~~~ 542 (546)
T PRK08314 534 RQLQEQEKA 542 (546)
T ss_pred HHHHHHHhh
Confidence 999987653
No 35
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-64 Score=583.66 Aligned_cols=495 Identities=20% Similarity=0.315 Sum_probs=395.1
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|+++++ .+|+++|++.. ++.+||+||.++++++|++|.+ .|+++||+|+|+++|++++++++|||++
T Consensus 25 ~~~~~l~~~a~-~~p~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~ 97 (562)
T PRK05677 25 NIQAVLKQSCQ-RFADKPAFSNL------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMR 97 (562)
T ss_pred cHHHHHHHHHH-hCCCCeeEEEC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57888998888 89999999965 5789999999999999999997 6999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccc--
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN-- 357 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-- 357 (759)
+|++++|++|.++.+++.+++++++++++|++.... ..+.+.... ..++.++..+.........
T Consensus 98 ~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 163 (562)
T PRK05677 98 AGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMA---------HLAEKVLPK-----TGVKHVIVTEVADMLPPLKRL 163 (562)
T ss_pred cCeEEeecCCCCCHHHHHHHHhccCceEEEEecchh---------hhHHHhhhc-----cCcceeEEecccccccchhhh
Confidence 999999999999999999999999999999876532 111111111 1223232221100000000
Q ss_pred ------------c-ccCCCCccchhhhcCCCC-CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH
Q 004348 358 ------------T-KWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (759)
Q Consensus 358 ------------~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (759)
. .........|.+.+.... .........++++++|+|||||||+||||+++|++++.+. ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~-~~~~~~ 242 (562)
T PRK05677 164 LINAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANM-LQCRAL 242 (562)
T ss_pred hcccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHH-HHHHHH
Confidence 0 000001122333222111 1111223467999999999999999999999999965443 333333
Q ss_pred hC--CCC-CcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCC
Q 004348 424 FD--YKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (759)
Q Consensus 424 ~~--l~~-~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~ 500 (759)
++ +.. .+++++.+|+.|..++.+.++.++..|++.++.+.. .++..+++.|+++++|+++.+|+++..|+....
T Consensus 243 ~~~~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 319 (562)
T PRK05677 243 MGSNLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNP---RDLPAMVKELGKWKFSGFVGLNTLFVALCNNEA 319 (562)
T ss_pred hccCCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCc---ccHHHHHHHHHHcCceEEecHHHHHHHHHhCcc
Confidence 33 443 468899999999998777788889999988777542 478999999999999999999999999887532
Q ss_pred cccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEE
Q 004348 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 580 (759)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~Iv 580 (759)
....+++++|.+++||++++++++++|.+.++ +++++.||+||++.++...... ..+++++|+|++++.++|+
T Consensus 320 --~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~ 392 (562)
T PRK05677 320 --FRKLDFSALKLTLSGGMALQLATAERWKEVTG---CAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVI 392 (562)
T ss_pred --cccCChhhceEEEEcCccCCHHHHHHHHHHcC---CCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEE
Confidence 22345679999999999999999999999876 7899999999998765433221 2356789999999999999
Q ss_pred CCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCH
Q 004348 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGT 641 (759)
Q Consensus 581 D~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~ 641 (759)
|++++++|.|+.|||+|+| |.+++||+++++.+.+.|.. +|||+|||+|+ +|++|+|
T Consensus 393 d~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~--~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p 468 (562)
T PRK05677 393 DDDGNELPLGEVGELCVKG--PQVMKGYWQRPEATDEILDS--DGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYP 468 (562)
T ss_pred CCCCCCCCCCCCeEEEEec--CccchhhcCCchhhhhccCC--CCcccccceEEECCCCcEEEEecCcCeEEeCCEEECH
Confidence 9999999999999999999 89999999999998877643 68999999987 8999999
Q ss_pred HHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCc
Q 004348 642 AEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGK 721 (759)
Q Consensus 642 ~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GK 721 (759)
.|||++|.+||+|.+++|++++++..++.+++||+++++...+ .++|+++++++|++|++|..|+++++||+|+|||
T Consensus 469 ~eiE~~l~~~~~v~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK 545 (562)
T PRK05677 469 NELEDVLAALPGVLQCAAIGVPDEKSGEAIKVFVVVKPGETLT---KEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGK 545 (562)
T ss_pred HHHHHHHHhCCCccEEEEEeccCccCCceEEEEEEeCCCCCCC---HHHHHHHHHHhhhhccCCcEEEEeccCCCCCccc
Confidence 9999999999999999999999888889999999987654433 5789999999999999999999999999999999
Q ss_pred ccHHHHHHHHhcc
Q 004348 722 IMRRILRKIASRQ 734 (759)
Q Consensus 722 vdR~~L~~~~~~~ 734 (759)
++|++|++.+..+
T Consensus 546 i~r~~L~~~~~~~ 558 (562)
T PRK05677 546 ILRRELRDEELKK 558 (562)
T ss_pred ccHHHHHHHHHHh
Confidence 9999999876543
No 36
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.5e-64 Score=574.57 Aligned_cols=487 Identities=24% Similarity=0.331 Sum_probs=407.0
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.+.|++++. .+|+++|+++. ++++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 6 ~i~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~ 78 (513)
T PRK07656 6 TLPELLARAAR-RFGDKEAYVFG------DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKA 78 (513)
T ss_pred cHHHHHHHHHH-HCCCCeEEEeC------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 57889999888 89999999986 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++..++++++++++++++... .........+ +.++.++....... . .
T Consensus 79 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~-~ 139 (513)
T PRK07656 79 GAVVVPLNTRYTADEAAYILARGDAKALFVLGLFL---------GVDYSATTRL----PALEHVVICETEED-----D-P 139 (513)
T ss_pred CeEEEecCcccCHHHHHHHHhhcCceEEEEchhhH---------HHHHHHHhcc----CCccEEEEEcCccc-----c-c
Confidence 99999999999999999999999999999987642 1122222222 34444444432211 0 0
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
.......|++.........+.....++++++|+|||||||.||+|.++|+++ ..........++++++|++++.+++.|
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (513)
T PRK07656 140 HTEKMKTFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQL-LSNAADWAEYLGLTEGDRYLAANPFFH 218 (513)
T ss_pred CccccccHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHH-HHHHHHHHHhhCCCCCCeEEEccchHH
Confidence 0112234555544333222334467889999999999999999999999995 444555667789999999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
.+++...++.+|..|+++++.+. .++..+++.|+++++|++.++|+++..|++.... ...+++++|.+++||++
T Consensus 219 ~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~l~~v~~~g~~ 292 (513)
T PRK07656 219 VFGYKAGVNAPLMRGATILPLPV----FDPDEVFRLIETERITVLPGPPTMYNSLLQHPDR--SAEDLSSLRLAVTGAAS 292 (513)
T ss_pred HHHHHHHHHHHHHcCceEEecCc----CCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCc--CCCCccceeeEEecCCC
Confidence 99987788999999999988643 3899999999999999999999999999887542 23467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC-CCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEec
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g 599 (759)
++++++++|.+.++. .++++.||+||++++.+...... ....++++|+|++|+.++|+|+++++++.|..|||+|+|
T Consensus 293 ~~~~~~~~~~~~~~~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~ 370 (513)
T PRK07656 293 MPVALLERFESELGV--DIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVRG 370 (513)
T ss_pred CCHHHHHHHHHHcCC--CceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEEc
Confidence 999999999999872 28999999999987665443222 112367899999999999999999999999999999999
Q ss_pred CCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEE
Q 004348 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVV 660 (759)
Q Consensus 600 ~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv 660 (759)
+.++.||+++++.+...+. .+|||+|||+|+ +|.||+|.|||++|.+|++|.+++|+
T Consensus 371 --~~~~~gy~~~~~~~~~~~~--~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~ 446 (513)
T PRK07656 371 --PNVMKGYYDDPEATAAAID--ADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVI 446 (513)
T ss_pred --chhhhhhcCCHHHHhhhhc--cCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEE
Confidence 8999999999988877653 378999999988 89999999999999999999999999
Q ss_pred eEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 661 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 661 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
+.++...++.+++||+.+++...+ .++|+++++++||++++|..|+++++||+|++||++|+.|++
T Consensus 447 ~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 447 GVPDERLGEVGKAYVVLKPGAELT---EEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred ecCCcccCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 998887888999999987644433 478999999999999999999999999999999999999975
No 37
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-64 Score=578.30 Aligned_cols=500 Identities=20% Similarity=0.232 Sum_probs=399.0
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~i 271 (759)
+|++....+++.++|+++++ ++|+++|+++.+ ..+.+||+||.++++++|++|.+.|+++||+|+|+++|+++++
T Consensus 8 ~~~~~~~~~~l~~~l~~~a~-~~p~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~ 82 (534)
T PRK05852 8 APMASDFGPRIADLVEVAAT-RLPEAPALVVTA----DRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFV 82 (534)
T ss_pred cchhhhhcccHHHHHHHHHH-hCCCCcEEEecC----CCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHH
Confidence 56666677789999999998 899999999752 2468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCc
Q 004348 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (759)
Q Consensus 272 va~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~ 351 (759)
+++|||+++|++++|++|.++.+++.++|++++++++|+++....... .... ......+.+....
T Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~---------~~~~------~~~~~~~~~~~~~ 147 (534)
T PRK05852 83 VALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA---------EPTT------RWWPLTVNVGGDS 147 (534)
T ss_pred HHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc---------cccc------cccceeeeecccc
Confidence 999999999999999999999999999999999999998764321000 0000 0001111111100
Q ss_pred cccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcE
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~ 431 (759)
... ... ....+...... ..........++++++|+|||||||.||||+++|+++. .........+++.++|+
T Consensus 148 ~~~--~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~-~~~~~~~~~~~~~~~d~ 219 (534)
T PRK05852 148 GPS--GGT----LSVHLDAATEP-TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIA-SSVRAIITGYRLSPRDA 219 (534)
T ss_pred ccc--ccc----cccccccccCC-CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHH-HHHHHHHHHhCCCCcce
Confidence 000 000 00001111100 00011112235788999999999999999999999954 44555566788999999
Q ss_pred EEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCe
Q 004348 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 511 (759)
Q Consensus 432 ~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sL 511 (759)
+++..|+.|..++...++.+|+.|+++++.... .+++..+++.|+++++|+++++|+++..|.+.........+++++
T Consensus 220 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l 297 (534)
T PRK05852 220 TVAVMPLYHGHGLIAALLATLASGGAVLLPARG--RFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAAL 297 (534)
T ss_pred EEEecCcchhHHHHHHHHHHHhcCCeEEeCCCc--CcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCe
Confidence 999999999999877889999999998875432 248889999999999999999999999998865432223457899
Q ss_pred eEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC------CCCCCCCCcCCCCCCceEEEECCCCc
Q 004348 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------AWPQKPGSATFPFFGVQPVIVDEKGV 585 (759)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~------~~~~~~~~iG~p~~g~~~~IvD~~g~ 585 (759)
|.++++|+++++++++++.+.++ .++++.||+||++..++..... ......+..|+ .+|++++|+|++++
T Consensus 298 r~i~~~G~~~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~ 373 (534)
T PRK05852 298 RFIRSCSAPLTAETAQALQTEFA---APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGL 373 (534)
T ss_pred eEEEECCCCCCHHHHHHHHHHhC---CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCC
Confidence 99999999999999999999987 7899999999998654432111 00112233444 69999999999999
Q ss_pred ccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHH
Q 004348 586 EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVES 646 (759)
Q Consensus 586 ~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~ 646 (759)
+++.|+.|||+|+| +.+++|||++++.+.+.|. +|||+|||+++ +|.+|+|.|||+
T Consensus 374 ~~~~g~~Gel~v~g--~~v~~gY~~~~~~t~~~~~---~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~ 448 (534)
T PRK05852 374 PLPAGAVGEVWLRG--TTVVRGYLGDPTITAANFT---DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEG 448 (534)
T ss_pred CCCCCCceEEEEec--CcccchhcCCcccchhhhc---CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHH
Confidence 99999999999999 8999999999999888763 68999999988 799999999999
Q ss_pred HHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHH
Q 004348 647 ALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRI 726 (759)
Q Consensus 647 ~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~ 726 (759)
+|.+||+|.+|+|++++++..++.++++|+.++....+ .++|+++++++||.|++|+.|++++++|+|++||++|++
T Consensus 449 ~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~~~~---~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~ 525 (534)
T PRK05852 449 VLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESAPPT---AEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRA 525 (534)
T ss_pred HHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHH
Confidence 99999999999999999888889999999987654333 578999999999999999999999999999999999999
Q ss_pred HHHHHhc
Q 004348 727 LRKIASR 733 (759)
Q Consensus 727 L~~~~~~ 733 (759)
|++.+..
T Consensus 526 L~~~~~~ 532 (534)
T PRK05852 526 VAEQFGH 532 (534)
T ss_pred HHHHhcc
Confidence 9998753
No 38
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.2e-63 Score=576.96 Aligned_cols=487 Identities=23% Similarity=0.323 Sum_probs=395.8
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+|+++|+++..+..+..+.+||+||+++++++|.+|++.|+++|++|+++++|++++++++|||+++
T Consensus 23 ~~~~~~~~~~~-~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 23 TINDHFDAAVA-NCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred cHHHHHHHHHH-HCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 57788999998 89999999874322233578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++.+++++++++++|+++.... .............+ +....++..+...
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------- 164 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRG----FDHAAMARELQSKL----PALRQVVVIDGDG--------- 164 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEcccccc----ccHHHHHHHHhccC----CcceEEEEecCCC---------
Confidence 999999999999999999999999999999765421 11112222221111 3334455443221
Q ss_pred CCCCccchhhhcCCC-----CC---CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEE
Q 004348 361 QDGRDIWWQDVVPKY-----PT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVY 432 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~ 432 (759)
...|++.+... +. ........++++++|+|||||||.||||+++|++++ .........+++..+|++
T Consensus 165 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~-~~~~~~~~~~~~~~~d~~ 239 (538)
T TIGR03208 165 ----DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLF-SNIHPYAERLELGGGDVI 239 (538)
T ss_pred ----CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHH-HHHHHHHhhcCCCCCCeE
Confidence 01122111100 00 011123467899999999999999999999999954 444455566788899999
Q ss_pred EEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCee
Q 004348 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (759)
Q Consensus 433 l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr 512 (759)
++.+|++|..++.+.++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|...... ...+++++|
T Consensus 240 l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~--~~~~~~~l~ 313 (538)
T TIGR03208 240 LMASPMAHQTGFMYGLMMPLILNATAVLQDI----WNPARAAELIRETGVTFTMASTPFLTDLCRAVKE--SGAPVPSLF 313 (538)
T ss_pred EEeCCchhHHHHHHHHHHHHHcCCEEEecCc----cCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhc--cCCCCCcce
Confidence 9999999998888889999999999998743 4899999999999999999999999988765421 234678999
Q ss_pred EEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCce
Q 004348 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS 592 (759)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~ 592 (759)
.+++||+++++++++++.+.++ ++++|.||+||++.+.+............++|+|++|++++|+|+++++++.|+.
T Consensus 314 ~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~ 390 (538)
T TIGR03208 314 TFLCAGAPIPGILVERAWELLG---ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET 390 (538)
T ss_pred EEEEcCCCCCHHHHHHHHHHcC---CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC
Confidence 9999999999999999999886 7899999999998765433221111234578999999999999999999999999
Q ss_pred EEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCc
Q 004348 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQ 653 (759)
Q Consensus 593 GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~ 653 (759)
|||+|+| +.++.||+++++.+.. ..+|||+|||+|+ +|++|+|.|||++|.+||+
T Consensus 391 Gel~v~g--~~~~~gy~~~~~~~~~----~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~ 464 (538)
T TIGR03208 391 GRLLVRG--CSNFGGYLKRPHLNST----DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPA 464 (538)
T ss_pred cEEEEec--CcccccccCCcccccc----cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcc
Confidence 9999999 8899999999986542 2478999999988 8999999999999999999
Q ss_pred cceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHh-hcCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 654 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 654 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~-~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
|.+++|++.++...++.++++|++.++...+ .+++++++++ +++.|++|..|++++++|+|++||++|+.|+
T Consensus 465 v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 465 VAQVAIVAYPDERLGERACAVVVPKPGCTLD---FAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred eeeEEEEeccCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 9999999999887889999999987665443 4678888985 7999999999999999999999999999986
No 39
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.5e-64 Score=595.81 Aligned_cols=509 Identities=18% Similarity=0.238 Sum_probs=382.8
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcC---CCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEAN---DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 276 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~---~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA 276 (759)
+++.++|+++++ ++||++|+.+... ..+..+.+||+||+++++++|++|+++|+++||+|+|+++|++||++++||
T Consensus 45 ~t~~~~l~~~a~-~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA 123 (666)
T PLN02614 45 DSCWDVFRMSVE-KYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEA 123 (666)
T ss_pred CcHHHHHHHHHH-hCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 478899999998 8999999986321 111234689999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccc
Q 004348 277 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 356 (759)
Q Consensus 277 ~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 356 (759)
|+++|+++||++|.++.+++.++|++++++++|+++.. +......+....+.++.++.++........
T Consensus 124 ~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~------------~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~ 191 (666)
T PLN02614 124 CNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKK------------ISELFKTCPNSTEYMKTVVSFGGVSREQKE 191 (666)
T ss_pred HHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHH------------HHHHHHhcccccccceEEEEeCCCChHHhh
Confidence 99999999999999999999999999999999997542 111111110000224556655431100000
Q ss_pred ccccCCCCccchhhhcCCCCC-CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH-----hCCCCCc
Q 004348 357 NTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-----FDYKPSD 430 (759)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~-----~~l~~~d 430 (759)
...........|++++..... ..+.....++|+++|+|||||||.||||++||++++.+ ....... +++.++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~-~~~~~~~~~~~~~~~~~~d 270 (666)
T PLN02614 192 EAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTL-IAGVIRLLKSANAALTVKD 270 (666)
T ss_pred hhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHH-HHHHHhhccccccCCCCCc
Confidence 000000011234444332111 11122346799999999999999999999999996544 3333222 2578899
Q ss_pred EEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccc-------
Q 004348 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV------- 503 (759)
Q Consensus 431 ~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~------- 503 (759)
++++++|++|.++... ++..+..|+++++.+ +++..+++.|+++++|+++++|++++.|........
T Consensus 271 ~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~ 344 (666)
T PLN02614 271 VYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLK 344 (666)
T ss_pred EEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHH
Confidence 9999999999988643 556788999998864 278999999999999999999999998764210000
Q ss_pred ----------------------c-------------cCCC-CCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccc
Q 004348 504 ----------------------T-------------RYSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQT 547 (759)
Q Consensus 504 ----------------------~-------------~~~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~T 547 (759)
. ...+ ++||.+++||+++++++ ++|.+.++ ++++++.||+|
T Consensus 345 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~--~~~i~~~YG~T 421 (666)
T PLN02614 345 KFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVA--CCHVLQGYGLT 421 (666)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhc--CCCEEeeCchH
Confidence 0 0011 68999999999999875 56667775 47899999999
Q ss_pred cccceecccCCCCCCCCCCCcCCCCCCceEEEEC-CC--CcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCC
Q 004348 548 ETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFP 624 (759)
Q Consensus 548 E~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD-~~--g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~ 624 (759)
|+++..+...+.. ..+.+++|+|++|++++|+| ++ +++++.|+.|||+|+| |+++.|||++|+.|.+.| . +
T Consensus 422 E~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrG--p~v~~GY~~~pe~T~~~f-~--d 495 (666)
T PLN02614 422 ESCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRG--KTLFSGYYKREDLTKEVL-I--D 495 (666)
T ss_pred hhhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcC--CcccccccCCHHHhhhhh-c--c
Confidence 9986544333221 23568999999999999998 33 4789999999999999 899999999999999887 2 7
Q ss_pred cEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCC---
Q 004348 625 GYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV--- 681 (759)
Q Consensus 625 g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~--- 681 (759)
|||+|||+|+ +|++|+|.|||++|.+||.|.+|+|++..+ ...++|+|++....
T Consensus 496 Gw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~---~~~l~alvv~~~~~~~~ 572 (666)
T PLN02614 496 GWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF---ESFLVAIANPNQQILER 572 (666)
T ss_pred CCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC---cceEEEEEeCCHHHHHH
Confidence 9999999998 599999999999999999999999998642 23699999986421
Q ss_pred -------C-------CcHHHHHHHHHHH-----HhhcCCCccccEEEEeCC-C-----CCCCCCcccHHHHHHHHhcccC
Q 004348 682 -------P-------YSEELRKSLVLAV-----RKQIGAFAAPDKIHWAPG-L-----PKTRSGKIMRRILRKIASRQLD 736 (759)
Q Consensus 682 -------~-------~~~~l~~~l~~~l-----~~~Lp~~~vP~~iv~v~~-l-----P~T~~GKvdR~~L~~~~~~~~~ 736 (759)
. .++++.+.|.+.+ ++.|+.|.+++.|+++++ | -+|+++|+.|+.+.+.|..+++
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~ 652 (666)
T PLN02614 573 WAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVID 652 (666)
T ss_pred HHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHH
Confidence 0 0122334444443 356999999999999874 3 3899999999999999998888
Q ss_pred CCCC
Q 004348 737 ELGD 740 (759)
Q Consensus 737 ~~~~ 740 (759)
+++.
T Consensus 653 ~ly~ 656 (666)
T PLN02614 653 EMYK 656 (666)
T ss_pred HHHH
Confidence 7763
No 40
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-63 Score=567.72 Aligned_cols=471 Identities=21% Similarity=0.285 Sum_probs=393.7
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
+.+.|+++++ .+||++|+++. ++.+||+||.++++++|++|++ .|+++|++|+++++|++++++++|||+++
T Consensus 4 ~~~~~~~~a~-~~p~~~a~~~~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~ 76 (496)
T PRK06839 4 IAYWIEKRAY-LHPDRIAIITE------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKV 76 (496)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 4567888998 89999999976 7899999999999999999985 79999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++..++++++++++++++... ..+.+.... .....++.+.+
T Consensus 77 G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~----------- 131 (496)
T PRK06839 77 ECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQ---------NMALSMQKV-----SYVQRVISITS----------- 131 (496)
T ss_pred CcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHH---------HHHHHhhhc-----cCcceEEEecc-----------
Confidence 99999999999999999999999999999876532 111111110 11222332221
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
+.+...... .......++++++|+|||||||.||+|+++|.+++.+.. .....+++.++|+++...|+.|
T Consensus 132 -------~~~~~~~~~--~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~-~~~~~~~~~~~d~~l~~~p~~~ 201 (496)
T PRK06839 132 -------LKEIEDRKI--DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNAL-NNTFAIDLTMHDRSIVLLPLFH 201 (496)
T ss_pred -------hHhhhccCC--CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHH-HHHHHcCCCCCCeEEEeeCCcc
Confidence 111111111 112234568899999999999999999999999544433 3345578889999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++.+.++.++..|+++++.+. ++++.++++++++++|++.++|++++.|++... ....+++++|.+++||++
T Consensus 202 ~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gG~~ 275 (496)
T PRK06839 202 IGGIGLFAFPTLFAGGVIIVPRK----FEPTKALSMIEKHKVTVVMGVPTIHQALINCSK--FETTNLQSVRWFYNGGAP 275 (496)
T ss_pred hhhHHHHHHHHHhcCcEEEEccC----CCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc--cccCCCcccceEEECCCC
Confidence 98877777889999999988643 489999999999999999999999999988753 233567899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecC
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~ 600 (759)
+++++++++.+. | +++++.||+||++...+.........+.+++|+|+++++++|+|+++++++.|+.|||+|+|
T Consensus 276 ~~~~~~~~~~~~-g---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~~- 350 (496)
T PRK06839 276 CPEELMREFIDR-G---FLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIRG- 350 (496)
T ss_pred CCHHHHHHHHHh-C---CeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEEC-
Confidence 999999999886 5 78999999999987544332222234567899999999999999999999999999999999
Q ss_pred CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEe
Q 004348 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVG 661 (759)
Q Consensus 601 ~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 661 (759)
+.++.||+++++.+...+ .+|||+|||+++ +|.+|+|.|||++|.+||+|.+|+|++
T Consensus 351 -~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 426 (496)
T PRK06839 351 -PNVMKEYWNRPDATEETI---QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVG 426 (496)
T ss_pred -CCcchhhcCChHHHHHHH---cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 899999999998877654 378999999988 799999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 662 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 662 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
++++..++.++++|+++++...+ .++|+++++++|++|++|..|++++++|+|.+||++|++|+++..
T Consensus 427 ~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~ 494 (496)
T PRK06839 427 RQHVKWGEIPIAFIVKKSSSVLI---EKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLK 494 (496)
T ss_pred ccccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhh
Confidence 99988889999999998765544 478999999999999999999999999999999999999998764
No 41
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.7e-63 Score=574.66 Aligned_cols=501 Identities=22% Similarity=0.276 Sum_probs=405.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
+++++|+++++ ++|+++|+++.+ .++.+||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 19 ~l~~~l~~~~~-~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~ 93 (558)
T PRK12583 19 TIGDAFDATVA-RFPDREALVVRH----QALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARI 93 (558)
T ss_pred cHHHHHHHHHH-HCCCCeEEEecC----CCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhh
Confidence 68999999998 899999999852 2578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHh--------h-cCCCccEEEEeccCc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECA--------K-SGISVDVCLTYENQS 351 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~--------~-~~~~~~~vi~~~~~~ 351 (759)
|++++|+++.++.+++.+++++++++++|+.+...... +...+......+. . .-+.+..++......
T Consensus 94 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 94 GAILVNINPAYRASELEYALGQSGVRWVICADAFKTSD----YHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred CCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccc----hhHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 99999999999999999999999999999987543211 1111111111110 0 001222223222111
Q ss_pred cccccccccCCCCccchhhhcCCCC------CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKYP------TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (759)
......|++...... .........++++++++|||||||.||||+++|++++ .........++
T Consensus 170 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~-~~~~~~~~~~~ 238 (558)
T PRK12583 170 ----------PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNIL-NNGYFVAESLG 238 (558)
T ss_pred ----------CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHH-HHHHHHHHHhC
Confidence 001122332221111 0111123457889999999999999999999999954 44555566688
Q ss_pred CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccccc
Q 004348 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (759)
Q Consensus 426 l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~ 505 (759)
+.++|+++...|++|..+..+.++.++..|+++++.... +++..+++.++++++|++.++|+++..++.... ...
T Consensus 239 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~--~~~ 313 (558)
T PRK12583 239 LTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEA---FDPLATLQAVEEERCTALYGVPTMFIAELDHPQ--RGN 313 (558)
T ss_pred CCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCC---CCHHHHHHHHHHcCCeEEeccHHHHHHHHcccc--ccC
Confidence 999999999999999999888899999999999876432 488999999999999999999999988876543 233
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC-CCCCCCCCcCCCCCCceEEEECCCC
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-AWPQKPGSATFPFFGVQPVIVDEKG 584 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~~iG~p~~g~~~~IvD~~g 584 (759)
.++++||.+++||+++++++++++.+.++ ...+++.||+||++.+.+..... ....+..++|+|++++.++|+|+++
T Consensus 314 ~~~~~lr~i~~~G~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~ 391 (558)
T PRK12583 314 FDLSSLRTGIMAGAPCPIEVMRRVMDEMH--MAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDG 391 (558)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHHcC--CcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCC
Confidence 56789999999999999999999999987 35799999999999765543221 1223567899999999999999999
Q ss_pred cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHH
Q 004348 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVE 645 (759)
Q Consensus 585 ~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE 645 (759)
++++.|+.|||+|+| +.++.||+++++.+...+. .+|||+|||+++ +|.+|+|.|||
T Consensus 392 ~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~--~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE 467 (558)
T PRK12583 392 ATVPRGEIGELCTRG--YSVMKGYWNNPEATAESID--EDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIE 467 (558)
T ss_pred CCCCCCCeeEEEEEe--CccchhhcCChHHHHhhcC--CCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHH
Confidence 999999999999999 8999999999998877653 368999999987 79999999999
Q ss_pred HHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHH
Q 004348 646 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 725 (759)
Q Consensus 646 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~ 725 (759)
++|.+||+|.+++|++++++..++.++++|+..++...+ .++|+++++++||+|++|..++++++||+|++||++|+
T Consensus 468 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~ 544 (558)
T PRK12583 468 EFLFTHPAVADVQVFGVPDEKYGEEIVAWVRLHPGHAAS---EEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKF 544 (558)
T ss_pred HHHHhCCCeeEEEEEeeecCCCCcEEEEEEEECCCCCCC---HHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHH
Confidence 999999999999999999887788999999987654433 57899999999999999999999999999999999999
Q ss_pred HHHHHHhccc
Q 004348 726 ILRKIASRQL 735 (759)
Q Consensus 726 ~L~~~~~~~~ 735 (759)
.|++++..+.
T Consensus 545 ~L~~~~~~~~ 554 (558)
T PRK12583 545 RMREISIEEL 554 (558)
T ss_pred HHHHHHHhhc
Confidence 9999977543
No 42
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-63 Score=576.23 Aligned_cols=486 Identities=20% Similarity=0.269 Sum_probs=382.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.+.|.++++ .+|+++|+++.+ .++.+||+||+++++++|+.|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 15 ~~~~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~ 89 (540)
T PRK05857 15 TVLDRVFEQAR-QQPEAIALRRCD----GTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKL 89 (540)
T ss_pred chHHHHHHHHh-hCCCcEEEeecC----CCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 56788888888 899999998652 2467999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.++++.++++++|+++....... .+.+.. ..+. .+.++.... .
T Consensus 90 G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~------~~~~~~-------~~~~-~~~~~~~~~----~--- 148 (540)
T PRK05857 90 GAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASS------AVPEAL-------HSIP-VIAVDIAAV----T--- 148 (540)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccc------cccccc-------cccc-eeEeecccc----c---
Confidence 999999999999999999999999999999876431110 000000 1111 122221100 0
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH----HHhCCCCCcEEEEec
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK----YAFDYKPSDVYWCTA 436 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~----~~~~l~~~d~~l~~~ 436 (759)
.. +.+...... ........++++++|+|||||||.||||+++|++++.+ ..... ..++...+++++...
T Consensus 149 ----~~-~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 221 (540)
T PRK05857 149 ----RE-SEHSLDAAS-LAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAV-PDILQKEGLNWVTWVVGETTYSPL 221 (540)
T ss_pred ----cc-ccccccccc-cccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhh-hHHhhhccccccccccCceeeecC
Confidence 00 000000000 01122346789999999999999999999999996543 22211 124566788999999
Q ss_pred CcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEE
Q 004348 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 516 (759)
Q Consensus 437 ~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~ 516 (759)
|+.|+.++ +..+.+|+.|+++++.+ .++..++++|++|++|+++++|++++.|++... ....+++++|.+++
T Consensus 222 p~~h~~~l-~~~~~~l~~G~~~v~~~-----~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~ 293 (540)
T PRK05857 222 PATHIGGL-WWILTCLMHGGLCVTGG-----ENTTSLLEILTTNAVATTCLVPTLLSKLVSELK--SANATVPSLRLVGY 293 (540)
T ss_pred CccccchH-HHHHHHhhcceeEEecC-----CChhHHHHHHHhcCcceEEeChHHHHHHHhccc--cCCCcCccceEEEE
Confidence 99999986 46788999999987632 277899999999999999999999999987643 23357889999999
Q ss_pred eCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC---CCCCCCCcCCCCCCceEEEECCCCcc------c
Q 004348 517 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---WPQKPGSATFPFFGVQPVIVDEKGVE------I 587 (759)
Q Consensus 517 gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~---~~~~~~~iG~p~~g~~~~IvD~~g~~------v 587 (759)
||++++....++ .+.++ +++++.||+||++...+...... ...+++++|+|++|++++|+|++++. +
T Consensus 294 gG~~~~~~~~~~-~~~~g---~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~ 369 (540)
T PRK05857 294 GGSRAIAADVRF-IEATG---VRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAG 369 (540)
T ss_pred cCccCCchhHHH-HHHhC---CeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccC
Confidence 999999888764 45665 88999999999986443221111 12346789999999999999987753 2
Q ss_pred CCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHH
Q 004348 588 EGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESAL 648 (759)
Q Consensus 588 p~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L 648 (759)
+.|+.|||+|+| |++++|||++++.+.+.|. +|||+|||+|+ +|+||+|.|||++|
T Consensus 370 ~~~~~Gel~v~g--~~~~~GY~~~~~~t~~~~~---~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l 444 (540)
T PRK05857 370 PSASFGTLWIKS--PANMLGYWNNPERTAEVLI---DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIA 444 (540)
T ss_pred CCCCcceEEEeC--cchhhhhhCCccchhhhcC---CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHH
Confidence 457899999999 8999999999999888774 68999999998 89999999999999
Q ss_pred hcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCC--cHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHH
Q 004348 649 VSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY--SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRI 726 (759)
Q Consensus 649 ~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~--~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~ 726 (759)
..||+|.+|+|+++++...++.++++|+..+.... .+++.+.+.+++++++++|++|..|++++++|+|++||+||++
T Consensus 445 ~~~~~V~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~ 524 (540)
T PRK05857 445 EGVSGVREAACYEIPDEEFGALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRAS 524 (540)
T ss_pred HhCCCeeEEEEEecCccccccceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHH
Confidence 99999999999999988777888888887654321 2345677778888999999999999999999999999999999
Q ss_pred HHHHHhcccC
Q 004348 727 LRKIASRQLD 736 (759)
Q Consensus 727 L~~~~~~~~~ 736 (759)
|++++.+...
T Consensus 525 l~~~~~~~~~ 534 (540)
T PRK05857 525 LAAAATADKA 534 (540)
T ss_pred HHHhhhhccc
Confidence 9999887543
No 43
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-62 Score=572.98 Aligned_cols=495 Identities=23% Similarity=0.294 Sum_probs=399.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 33 ~l~~~~~~~~~-~~p~~~a~~~~------~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~ 105 (573)
T PRK05605 33 TLVDLYDNAVA-RFGDRPALDFF------GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRL 105 (573)
T ss_pred CHHHHHHHHHH-HCCCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 47888999998 89999999986 578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccc-----
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR----- 355 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~----- 355 (759)
|++++|++|.++.+++.+++++++++++|+++... ..+...... ..+..++.++.......
T Consensus 106 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~ 171 (573)
T PRK05605 106 GAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVA---------PTVERLRRT-----TPLETIVSVNMIAAMPLLQRLA 171 (573)
T ss_pred CcEEeecCcCCCHHHHHHHHhccCCcEEEechhhH---------HHHHhhhhc-----cccceeEeeecccccccccccc
Confidence 99999999999999999999999999999976532 111111111 12333333321100000
Q ss_pred ------------cccccCCCCccchhhhcCCCCCC----CCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHH
Q 004348 356 ------------ENTKWQDGRDIWWQDVVPKYPTK----CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT 419 (759)
Q Consensus 356 ------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~ 419 (759)
+.........+.|.+........ .......++++++|+|||||||.||+|+++|++++.+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~ 251 (573)
T PRK05605 172 LRLPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQG 251 (573)
T ss_pred cccccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHH
Confidence 00000011223455443321111 12233567899999999999999999999999965544322
Q ss_pred HHHHhCCC-CCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhc
Q 004348 420 FKYAFDYK-PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (759)
Q Consensus 420 ~~~~~~l~-~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~ 498 (759)
.....++. .++++++..|+.|..++.+.++.++..|+++++.+. ++++.+++.|+++++|++.++|++++.|.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~ 327 (573)
T PRK05605 252 KAWVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPA----PDIDLILDAMKKHPPTWLPGVPPLYEKIAEA 327 (573)
T ss_pred HhhccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHhCCEEEEchHHHHHHHHhC
Confidence 22222233 468999999999988877778888999999999864 3899999999999999999999999999876
Q ss_pred CCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEE
Q 004348 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (759)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~ 578 (759)
.. ....++++||.+++||+++++++.++|.+.++ .++++.||+||+++++...... ...+++++|+|++|+.++
T Consensus 328 ~~--~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~---~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~ 401 (573)
T PRK05605 328 AE--ERGVDLSGVRNAFSGAMALPVSTVELWEKLTG---GLLVEGYGLTETSPIIVGNPMS-DDRRPGYVGVPFPDTEVR 401 (573)
T ss_pred cc--ccCCCchhccEEEECCCcCCHHHHHHHHHHhC---CCeecccccchhchhhhcCCcc-cCCcCCccccCCCCCEEE
Confidence 53 23446789999999999999999999998876 7899999999998765543221 123567899999999999
Q ss_pred EECCC--CcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccE
Q 004348 579 IVDEK--GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGH 637 (759)
Q Consensus 579 IvD~~--g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~ 637 (759)
|+|++ +++++.|..|||+|+| +.++.||+++++.+...|. +|||+|||+++ +|+
T Consensus 402 i~d~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~---~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~ 476 (573)
T PRK05605 402 IVDPEDPDETMPDGEEGELLVRG--PQVFKGYWNRPEETAKSFL---DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGF 476 (573)
T ss_pred EEcCCCCCccCCCCCeeEEEEec--CchhhhhcCChhHhhhccc---CCCcccCCEEEEcCCCcEEEEeccccceeeCCE
Confidence 99976 5899999999999999 8999999999998887764 57999999988 899
Q ss_pred eeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCC
Q 004348 638 RIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKT 717 (759)
Q Consensus 638 rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T 717 (759)
+|+|.|||++|.+|+.|.+++|++++++..++.++++|+++++...+ .++|+++++++|+.|++|..|+++++||+|
T Consensus 477 ~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t 553 (573)
T PRK05605 477 NVYPAEVEEVLREHPGVEDAAVVGLPREDGSEEVVAAVVLEPGAALD---PEGLRAYCREHLTRYKVPRRFYHVDELPRD 553 (573)
T ss_pred EECHHHHHHHHHhCcccceEEEEeeecccCCeEEEEEEEECCCCCCC---HHHHHHHHHHhCccccCCcEEEEeccCCCC
Confidence 99999999999999999999999999888889999999988765443 578999999999999999999999999999
Q ss_pred CCCcccHHHHHHHHhcc
Q 004348 718 RSGKIMRRILRKIASRQ 734 (759)
Q Consensus 718 ~~GKvdR~~L~~~~~~~ 734 (759)
.+||++|++|++++..+
T Consensus 554 ~~GKi~r~~L~~~~~~~ 570 (573)
T PRK05605 554 QLGKVRRREVREELLEK 570 (573)
T ss_pred CcccccHHHHHHHHHHH
Confidence 99999999999988654
No 44
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-63 Score=563.82 Aligned_cols=475 Identities=21% Similarity=0.294 Sum_probs=395.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ ++|+++|+++. ++.+||.||.++++++|.+|.+.|+++|++|+++++|++++++++|||+++
T Consensus 3 ~~~~~~~~~~~-~~~~~~a~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (497)
T PRK06145 3 NLSASIAFHAR-RTPDRAALVYR------DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYL 75 (497)
T ss_pred cHHHHHHHHHH-HCCCceEEEEC------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 35688999998 89999999976 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++++++..... . .. . ...+.++....
T Consensus 76 G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~-------------~-~~-----~-~~~~~~~~~~~-------- 127 (497)
T PRK06145 76 GAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAI-------------V-AL-----E-TPKIVIDAAAQ-------- 127 (497)
T ss_pred CcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhh-------------h-hc-----c-cceEEecCccc--------
Confidence 9999999999999999999999999999997653210 0 00 0 11121211100
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
..+.................++++++|+|||||||.||||+++|++++.. .......+++..+++++...|+.|
T Consensus 128 -----~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~ 201 (497)
T PRK06145 128 -----ADSRRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWK-SIDHVIALGLTASERLLVVGPLYH 201 (497)
T ss_pred -----chhHHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHhhCCCCCcEEEEecCchh
Confidence 00000000000011112346789999999999999999999999995543 334445678999999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++.+..+.++..|+++++.+. +++..+++.++++++|++.++|++++.|+..... ...+++++|.+++|||+
T Consensus 202 ~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~--~~~~~~~l~~~~~gG~~ 275 (497)
T PRK06145 202 VGAFDLPGIAVLWVGGTLRIHRE----FDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDR--DRFDLDSLAWCIGGGEK 275 (497)
T ss_pred HhHHHHHHHHHHhccCEEEECCc----CCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCc--cccccccceEEEecCCC
Confidence 88876666788999999998753 4899999999999999999999999999876542 34467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecC
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~ 600 (759)
+++++++++.+.++ +.++++.||+||++...+...........+++|+|+++++++|+|+++++++.|+.|||+++|
T Consensus 276 ~~~~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g- 352 (497)
T PRK06145 276 TPESRIRDFTRVFT--RARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRG- 352 (497)
T ss_pred CCHHHHHHHHHHcC--CCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEEC-
Confidence 99999999999987 478999999999987544332222223567899999999999999999999999999999999
Q ss_pred CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEe
Q 004348 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVG 661 (759)
Q Consensus 601 ~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 661 (759)
+.++.||+++++.+...|. ++||+|||+++ +|++|+|.|||++|.+||+|.+++|++
T Consensus 353 -~~~~~Gy~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~ 428 (497)
T PRK06145 353 -PKVTKGYWKDPEKTAEAFY---GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIG 428 (497)
T ss_pred -cchhhhhcCChHHHHHHHh---CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEe
Confidence 8999999999999988874 68999999987 799999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 662 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 662 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
.+++..++.+++++++.+..... .++|+++++++|++|++|..|+++++||+|++||++|++|++.+.
T Consensus 429 ~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 429 VHDDRWGERITAVVVLNPGATLT---LEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred cCCCccCceEEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 99888888999999987654433 578999999999999999999999999999999999999998764
No 45
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-62 Score=565.58 Aligned_cols=493 Identities=24% Similarity=0.298 Sum_probs=407.2
Q ss_pred ccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 199 TNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 199 ~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
.+++.++|.++++ .+|+++|+++. ++.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+
T Consensus 10 ~~~l~~~l~~~a~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~ 82 (523)
T PRK08316 10 RQTIGDILRRSAR-RYPDKTALVFG------DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACA 82 (523)
T ss_pred CCCHHHHHHHHHH-HCCCCeEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 3478999999998 89999999986 6889999999999999999999999999999999999999999999999
Q ss_pred HhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccc
Q 004348 279 RIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENT 358 (759)
Q Consensus 279 kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 358 (759)
++|++++|+++.++.+++..+++.++++++++++... ..+....+.. . ...+...... ..
T Consensus 83 ~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~----~-~~~~~~~~~~------~~ 142 (523)
T PRK08316 83 RAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALA---------PTAEAALALL----P-VDTLILSLVL------GG 142 (523)
T ss_pred hcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchH---------HHHHHHhhhc----C-ccceeeeecc------cc
Confidence 9999999999999999999999999999999987542 2222222221 1 1111110000 00
Q ss_pred ccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCc
Q 004348 359 KWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (759)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l 438 (759)
.........+.+.....+..........+++++|+|||||||.||+|.++|++++.+ .......+++.++|+++...|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~~~~p~ 221 (523)
T PRK08316 143 REAPGGWLDFADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAE-YVSCIVAGDMSADDIPLHALPL 221 (523)
T ss_pred cccccchhhHHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHHhCCCCCceEEEccCC
Confidence 000111223333333222222333467789999999999999999999999995444 4445566889999999999999
Q ss_pred chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 439 ~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
.|..++...++.++..|+++++.+. ++++.+++.|+++++|++.++|+++..|.+... ....+++++|.+++||
T Consensus 222 ~h~~g~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~~gg 295 (523)
T PRK08316 222 YHCAQLDVFLGPYLYVGATNVILDA----PDPELILRTIEAERITSFFAPPTVWISLLRHPD--FDTRDLSSLRKGYYGA 295 (523)
T ss_pred chhhhHHHHHHHHHhcCceEEEecC----CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcc--cccCCcccceEEEEcC
Confidence 9988865566677899999999864 389999999999999999999999999987653 2345778999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEe
Q 004348 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
++++.++.+++.+.++ ++++++.||+||++.+.............+++|+|+++++++|+|+++++++.|+.|||+++
T Consensus 296 ~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~ 373 (523)
T PRK08316 296 SIMPVEVLKELRERLP--GLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHR 373 (523)
T ss_pred CcCCHHHHHHHHHHcC--CCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEE
Confidence 9999999999999885 48899999999998765543222223456789999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| ++++.||+++++.+...| .+|||+|||+|+ +|++|+|.|||+.|.++++|.+++|
T Consensus 374 ~--~~~~~~y~~~~~~~~~~~---~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v 448 (523)
T PRK08316 374 S--PQLMLGYWDDPEKTAEAF---RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAV 448 (523)
T ss_pred C--CchhhhhcCCHHHHHHHh---hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeE
Confidence 9 899999999999888776 368999999988 7999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~ 735 (759)
++.+++..++.++++++++++...+ .++|+++++++|+.|++|..+++++++|+|++||++|++|++.+.+.+
T Consensus 449 ~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 449 IGLPDPKWIEAVTAVVVPKAGATVT---EDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred ecccCcccCCeEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 9999988889999999988765433 577899999999999999999999999999999999999999997654
No 46
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.7e-63 Score=574.76 Aligned_cols=494 Identities=21% Similarity=0.216 Sum_probs=380.5
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCC----CcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDP----GVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 276 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~----~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA 276 (759)
.+.++|+++++ ++||++|+++.+... ...+.+||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 7 ~~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la 85 (552)
T PRK09274 7 NIARHLPRAAQ-ERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFA 85 (552)
T ss_pred hHHHHHHHHHH-hCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 35677888887 899999999863210 0123899999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccc
Q 004348 277 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 356 (759)
Q Consensus 277 ~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 356 (759)
|+++|++++|++|.++.+++.+++++++++++|+++... ....+... .......++.++....
T Consensus 86 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-----------~~~~~~~~--~~~~~~~~i~~~~~~~---- 148 (552)
T PRK09274 86 LFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-----------LARRLFGW--GKPSVRRLVTVGGRLL---- 148 (552)
T ss_pred HHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-----------HHHHHhcc--Cccchhheeccccccc----
Confidence 999999999999999999999999999999999864210 00101000 0011222332221100
Q ss_pred ccccCCCCccchhhhcCCC-CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEe
Q 004348 357 NTKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCT 435 (759)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~ 435 (759)
.....+.+..... ..........++++++|+|||||||.||||+++|+++ ..........+++.++|+.++.
T Consensus 149 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l-~~~~~~~~~~~~~~~~~~~~~~ 221 (552)
T PRK09274 149 ------WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMF-EAQIEALREDYGIEPGEIDLPT 221 (552)
T ss_pred ------cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHH-HHHHHHHHHHhCCCCCceeeec
Confidence 0011233322111 1112223456789999999999999999999999995 4445556667899999999988
Q ss_pred cCcchhchhhHHHHHHhhcCcEEEEecCC---CCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCee
Q 004348 436 ADCGWITGHSYVTYGPMLNGASVVVFEGA---PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLR 512 (759)
Q Consensus 436 ~~l~~~~g~~~~~~~~L~~G~tlvl~~~~---~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr 512 (759)
.|+.|.. ++..|+++++.+.. +..+++..+++.|+++++|+++++|++++.|.+... ....++++||
T Consensus 222 ~pl~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--~~~~~~~~lr 291 (552)
T PRK09274 222 FPLFALF--------GPALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGE--ANGIKLPSLR 291 (552)
T ss_pred cCHHHhh--------hhhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhh--hcCCCCchhh
Confidence 8875532 24568888876422 123588999999999999999999999999987643 2344789999
Q ss_pred EEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC------C--CCCCCCCcCCCCCCceEEEECC--
Q 004348 513 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------A--WPQKPGSATFPFFGVQPVIVDE-- 582 (759)
Q Consensus 513 ~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~------~--~~~~~~~iG~p~~g~~~~IvD~-- 582 (759)
.+++|||++++++++++.+.++. ++++++.||+||++.+++..... . ......++|+|++|++++|+|+
T Consensus 292 ~~~~gG~~~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~ 370 (552)
T PRK09274 292 RVISAGAPVPIAVIERFRAMLPP-DAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISD 370 (552)
T ss_pred EEEecCCcCCHHHHHHHHHHcCC-CceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccc
Confidence 99999999999999999999863 37899999999998754432211 0 0112347899999999999984
Q ss_pred -------CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCc--EEEeCCeee-------------------
Q 004348 583 -------KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCS------------------- 634 (759)
Q Consensus 583 -------~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g--~y~TGDl~~------------------- 634 (759)
++++++.|+.|||+|+| |.++.|||++++.+...|+.+.+| ||+|||+|+
T Consensus 371 ~~~~~~~~~~~~~~g~~Gel~v~g--~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~ 448 (552)
T PRK09274 371 APIPEWDDALRLATGEIGEIVVAG--PMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVET 448 (552)
T ss_pred cccccccccccCCCCCeeEEEEec--CcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEE
Confidence 56789999999999999 899999999999998887654566 999999998
Q ss_pred ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCc-HHHHHHHHHHHHhhcCCCccccEEEEeCC
Q 004348 635 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPG 713 (759)
Q Consensus 635 ~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~-~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~ 713 (759)
+|++|+|.|||++|.+||+|.+|+|++++++ .++.++++|++.++...+ +++.++++++++. ++.++.|..++++++
T Consensus 449 ~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~ 526 (552)
T PRK09274 449 AGGTLYTIPCERIFNTHPGVKRSALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALAAA-HPHTAGIERFLIHPS 526 (552)
T ss_pred CCEEECcHHHHHHHHhCcccceeEEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHHHh-cCCCcceeEEeccCC
Confidence 7999999999999999999999999999876 466889999988765433 3345566665544 356678899999999
Q ss_pred CCCC--CCCcccHHHHHHHHhcc
Q 004348 714 LPKT--RSGKIMRRILRKIASRQ 734 (759)
Q Consensus 714 lP~T--~~GKvdR~~L~~~~~~~ 734 (759)
||+| +||||||++|++++...
T Consensus 527 lP~t~~~~GKi~r~~L~~~~~~~ 549 (552)
T PRK09274 527 FPVDIRHNAKIFREKLAVWAAKQ 549 (552)
T ss_pred CCccccccccccHHHHHHHHHHh
Confidence 9999 79999999999987643
No 47
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.4e-62 Score=566.55 Aligned_cols=482 Identities=21% Similarity=0.308 Sum_probs=392.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+|+++|+++. .+.+||+||.++++++|..|.++|+++|++|+++++|++++++++|||+++
T Consensus 24 ~l~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 96 (527)
T TIGR02275 24 PLTDILRDQAA-RYPDAIAIICG------NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKL 96 (527)
T ss_pred cHHHHHHHHHH-HCCCceEEEeC------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHc
Confidence 47789999998 89999999875 679999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++++++.++.+++.++++.++++++++++.... .............+ +.++.++...... .
T Consensus 97 G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~--------~ 160 (527)
T TIGR02275 97 GIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSL----FDYDAFARQLQSKL----PTLRNIIVAGQTR--------V 160 (527)
T ss_pred CeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccc----cchHHHHHHHHhhC----CcceEEEEecCCC--------C
Confidence 999999999999999999999999999999765321 01111111111111 2333333322110 0
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
.......+.......+.....++++++|+|||||||.||||+++|.+++.+ .......+.++++|++++.+|++|
T Consensus 161 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~d~~l~~~P~~h 235 (527)
T TIGR02275 161 ----EAELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYS-VRRSVEICWLTQQTRYLCALPAAH 235 (527)
T ss_pred ----cchhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHH-HHHHHhhcCCCcCCEEEECCChHh
Confidence 000000111111112223456789999999999999999999999996544 444556688999999999999999
Q ss_pred hchhhH-HHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 441 ITGHSY-VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 441 ~~g~~~-~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
.+++.. .++.+|..|+++++.+. +++..+++.++++++|++.++|+++..|++.... ...+++++|.+++||+
T Consensus 236 ~~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~gG~ 309 (527)
T TIGR02275 236 NYPLSSPGALGVFYAGGCVVLAPD----PSPTDCFPLIERHKVTVTALVPPAVALWMQAASK--SRYDLSSLKLLQVGGA 309 (527)
T ss_pred hhhhhHHHHHHHHhcCCeEEECCC----CCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccc--cCCCccceEEEEEcCC
Confidence 887654 57889999999988643 4889999999999999999999999998876542 3456789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCC-CceEEEECCCCcccCCCceEEEEEe
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF-GVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~-g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
++++++++++.+.++ +++++.||+||++..... .........+++|+|++ +..++|+|+++++++.|+.|||+|+
T Consensus 310 ~l~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~ 385 (527)
T TIGR02275 310 KFSEAAARRVPAVFG---CQLQQVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTR 385 (527)
T ss_pred CCCHHHHHHHHHHhC---CeEEeeeccCccCccccC-CCCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEec
Confidence 999999999999887 789999999997643321 11111234568999994 8899999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| +.++.||+++++.+...|.. +|||+|||+++ +|++|+|.|||++|.+||+|.+|+|
T Consensus 386 g--~~~~~gY~~~~~~~~~~~~~--dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 461 (527)
T TIGR02275 386 G--PYTFRGYYKAPEHNAAAFDA--EGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAAL 461 (527)
T ss_pred C--CccchhhcCChhHhHhhcCc--CCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEE
Confidence 9 89999999999998877644 78999999988 7999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh-cCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
++.++...++.+++||+++++.. + .++|+++++++ +|.|++|..|+++++||+|++||++|++|+
T Consensus 462 ~~~~~~~~~~~~~a~vv~~~~~~-~---~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 462 VSMPDELLGEKSCAFIVVRDPAL-K---AAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EecCCcccccEEEEEEEECCCCC-C---HHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 99999888899999999876532 2 57899999985 999999999999999999999999999874
No 48
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2e-62 Score=567.94 Aligned_cols=494 Identities=23% Similarity=0.339 Sum_probs=400.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+||++|+++.+ ++.+||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 24 ~l~~~~~~~~~-~~pd~~a~~~~~-----~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~ 97 (547)
T PRK06087 24 SLADYWQQTAR-AMPDKIAVVDNH-----GASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKV 97 (547)
T ss_pred CHHHHHHHHHH-HCCCceEEEcCC-----CCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 47889999998 899999998641 378999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++.+++++++++++++++..... ...+.+......+ +.+..++.++....
T Consensus 98 G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 161 (547)
T PRK06087 98 GAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQT----RPVDLILPLQNQL----PQLQQIVGVDKLAP-------- 161 (547)
T ss_pred CcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccc----cHHHHHHHHHhhC----CCCcEEEEeCCcCC--------
Confidence 9999999999999999999999999999997653211 1222232222222 34445555443210
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
......+.+.....+.........++++++|+|||||||.||||+++|++++.. .......+++.++|++++..|+.|
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~l~~~pl~h 239 (547)
T PRK06087 162 -ATSSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILAS-ERAYCARLNLTWQDVFMMPAPLGH 239 (547)
T ss_pred -CcCccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHhcCCCCCCeEEEecchHH
Confidence 001123333333222211222356789999999999999999999999995544 444556678899999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
.+++...++.+++.|+++++.+. +++..+++.|+++++|++..+|+.+..+++... ....++++||.+++||++
T Consensus 240 ~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~--~~~~~~~~lr~i~~gG~~ 313 (547)
T PRK06087 240 ATGFLHGVTAPFLIGARSVLLDI----FTPDACLALLEQQRCTCMLGATPFIYDLLNLLE--KQPADLSALRFFLCGGTT 313 (547)
T ss_pred HHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCCEEeccHHHHHHHHhccc--cCCCCCCCeEEEEEcCCC
Confidence 99877788999999999999754 489999999999999999887776666665532 123467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecC
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~ 600 (759)
+++++.+.+.+. + +++++.||+||++...+...........+++|+|++++.++|+|+++++++.|+.|||+|+|
T Consensus 314 ~~~~~~~~~~~~-~---~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g- 388 (547)
T PRK06087 314 IPKKVARECQQR-G---IKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASRG- 388 (547)
T ss_pred CCHHHHHHHHHc-C---CcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEec-
Confidence 999999887764 4 88999999999987654332221122345789999999999999999999999999999999
Q ss_pred CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEe
Q 004348 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVG 661 (759)
Q Consensus 601 ~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 661 (759)
+.++.||+++++.+...+.. +|||+|||+++ +|.+|+|.+||++|.++|+|.+++|++
T Consensus 389 -~~~~~gy~~~~~~~~~~~~~--~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~ 465 (547)
T PRK06087 389 -PNVFMGYLDEPELTARALDE--EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVA 465 (547)
T ss_pred -ccccccccCCHHHHHHHhCC--CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEe
Confidence 89999999999988777643 68999999988 799999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCC-CCCcHHHHHHHHHHHH-hhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc
Q 004348 662 VEHEVKGQGIYAFVTLVEG-VPYSEELRKSLVLAVR-KQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 662 ~~~~~~~~~lva~Vv~~~~-~~~~~~l~~~l~~~l~-~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~ 735 (759)
.+++..+++++++|++.+. ...+ .+++.+++. +.++.|++|..|.++++||+|.+||++|+.|++.+..+.
T Consensus 466 ~~~~~~g~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 466 MPDERLGERSCAYVVLKAPHHSLT---LEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred cCCCCcCceEEEEEEECCCCCCCC---HHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 9988888999999998753 2222 467777775 579999999999999999999999999999999887654
No 49
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-62 Score=562.54 Aligned_cols=488 Identities=26% Similarity=0.353 Sum_probs=410.7
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
+++++|+++++ .+|+++|+.+. ++.+||+||+++++++|+.|.+.|+++|++|++++++++++++++|||+++
T Consensus 7 ~l~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~ 79 (521)
T PRK06187 7 TIGRILRHGAR-KHPDKEAVYFD------GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKI 79 (521)
T ss_pred CHHHHHHHHHH-HCCCceEEEeC------CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 68899999999 89999999987 567999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++..+++.+++++++++... ...+......+ +.++.++.++.... ..
T Consensus 80 G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~------~~ 140 (521)
T PRK06187 80 GAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEF---------VPLLAAILPQL----PTVRTVIVEGDGPA------AP 140 (521)
T ss_pred CeEEEecccCCCHHHHHHHHHhcCCeEEEEcchH---------HHHHHHHhhcc----CCccEEEEecCccc------cc
Confidence 9999999999999999999999999999998753 23333333332 34455555543321 00
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
.......+.+.+...+...+.....++++++|+|||||||.||+|.++|++++ .........+++.++|++++.++++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~-~~~~~~~~~~~~~~~d~~~~~~~~~~ 219 (521)
T PRK06187 141 LAPEVGEYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLF-LHSLAVCAWLKLSRDDVYLVIVPMFH 219 (521)
T ss_pred cccccccHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHH-HHHHHHHHhhCCCCCCEEEEeCCchH
Confidence 11123345555444443333445667899999999999999999999999954 44444556789999999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++.. .+.++..|+++++.+.. ++..+++.|+++++|+++++|++++.|.+.... ...++++||.+++|||+
T Consensus 220 ~~~~~~-~~~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~~~l~~v~~~Ge~ 292 (521)
T PRK06187 220 VHAWGL-PYLALMAGAKQVIPRRF----DPENLLDLIETERVTFFFAVPTIWQMLLKAPRA--YFVDFSSLRLVIYGGAA 292 (521)
T ss_pred HhhHHH-HHHHHHhCCEEEecCCC----CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC--CccCcchhhEEEEcCcC
Confidence 887544 44599999999998652 889999999999999999999999999887653 34578899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCC----CCCCCCcCCCCCCceEEEECCCCcccCC--CceEE
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAW----PQKPGSATFPFFGVQPVIVDEKGVEIEG--ECSGY 594 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~----~~~~~~iG~p~~g~~~~IvD~~g~~vp~--g~~GE 594 (759)
++++++++|.+.++ +++++.||+||++.+......... .....++|+|++++.++|+|+++++++. |..||
T Consensus 293 l~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Ge 369 (521)
T PRK06187 293 LPPALLREFKEKFG---IDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGE 369 (521)
T ss_pred CCHHHHHHHHHHhC---cchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeE
Confidence 99999999999885 889999999999876554322211 1256789999999999999999999998 99999
Q ss_pred EEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccc
Q 004348 595 LCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCA 655 (759)
Q Consensus 595 L~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ 655 (759)
|+|+| +.++.||+++++.+...|. +|||+|||+++ +|.+|+|.+||++|.++++|.
T Consensus 370 l~v~~--~~~~~~y~~~~~~~~~~~~---~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~ 444 (521)
T PRK06187 370 IIVRG--PWLMQGYWNRPEATAETID---GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVA 444 (521)
T ss_pred EEEEC--cchhhhhcCCHHHHHHHhh---CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCce
Confidence 99999 8899999999998887764 56999999988 899999999999999999999
Q ss_pred eEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 656 EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 656 ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+++|++.+++..++.++++++++++...+ .++++++++++|+.|++|..|+++++||+|++||++|+.|++++..
T Consensus 445 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 445 EVAVIGVPDEKWGERPVAVVVLKPGATLD---AKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred EEEEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 99999998887788999999987765443 5789999999999999999999999999999999999999998864
No 50
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.8e-62 Score=565.67 Aligned_cols=481 Identities=23% Similarity=0.314 Sum_probs=395.3
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+||++|+++. ++.+||+||.++++++|..|.+.|+++|++|+++++|++++++++|||+++
T Consensus 22 ~l~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~ 94 (542)
T PRK06155 22 TLPAMLARQAE-RYPDRPLLVFG------GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWL 94 (542)
T ss_pred CHHHHHHHHHH-HCCCCeEEEeC------CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 57899999999 89999999976 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++..+++++++++++++.... ..+...... ...+..++.++.... .
T Consensus 95 G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~---------~~~~~~~~~----~~~~~~~~~~~~~~~-------~ 154 (542)
T PRK06155 95 GAIAVPINTALRGPQLEHILRNSGARLLVVEAALL---------AALEAADPG----DLPLPAVWLLDAPAS-------V 154 (542)
T ss_pred CCEEEEeccccCHHHHHHHHHhcCceEEEEChhhH---------HHHHHhccc----ccCcceEEEecCccc-------c
Confidence 99999999999999999999999999999976532 111111110 022344554443210 0
Q ss_pred CCCCccchhhh-cCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 361 QDGRDIWWQDV-VPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 361 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
.. ...|... ..............++++++|+|||||||.||||+++|++++. ........+++++++++++..|++
T Consensus 155 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~-~~~~~~~~~~~~~~~~~l~~~pl~ 231 (542)
T PRK06155 155 SV--PAGWSTAPLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYW-WGRNSAEDLEIGADDVLYTTLPLF 231 (542)
T ss_pred cc--ccccchhhhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHH-HHHHHHHhcCCCCCCEEEEecCHH
Confidence 00 0011100 0001111112234678999999999999999999999999544 344456668899999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++ ..++.+++.|+++++.+. .++..+++.|+++++|++.++|+++..|++.... .....+++|.++.||
T Consensus 232 ~~~~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~l~~~~~g~- 303 (542)
T PRK06155 232 HTNAL-NAFFQALLAGATYVLEPR----FSASGFWPAVRRHGATVTYLLGAMVSILLSQPAR--ESDRAHRVRVALGPG- 303 (542)
T ss_pred HHHHH-HHHHHHHHcCceEEeeCC----CCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCc--cccccCceEEEEEcC-
Confidence 99885 467899999999998753 3899999999999999999999999999877542 234567899887666
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEec
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g 599 (759)
+++++.+++.+.++ ++++|.||+||++..+..... ...++++|+|++++.++|+|++++++|.|..|||+|+|
T Consensus 304 -~~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~ 376 (542)
T PRK06155 304 -VPAALHAAFRERFG---VDLLDGYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRA 376 (542)
T ss_pred -CCHHHHHHHHHHcC---CCEEeeecccccCccccCCCC---CCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEec
Confidence 57899999999887 789999999999876543221 24567899999999999999999999999999999999
Q ss_pred CCC-cccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 600 SWP-GAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 600 ~~~-~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
+.| +++.||+++++.+...| .+|||+|||+|+ +|.+|+|.|||++|.+||+|.+|+|
T Consensus 377 ~~~~~~~~GY~~~~~~~~~~~---~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v 453 (542)
T PRK06155 377 DEPFAFATGYFGMPEKTVEAW---RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAV 453 (542)
T ss_pred CCccccchhhcCCHHHHHHhh---cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEE
Confidence 433 79999999999888775 378999999988 8999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
++++++..++.+.++++++++...+ ..+++++++++|+.|++|..|+++++||+|++||++|++|++++.
T Consensus 454 ~~v~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 454 FPVPSELGEDEVMAAVVLRDGTALE---PVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred EeecccccCceEEEEEEECCCCCCC---HHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 9999888888899999987665443 578999999999999999999999999999999999999998764
No 51
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-62 Score=565.62 Aligned_cols=485 Identities=22% Similarity=0.354 Sum_probs=395.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|.++++ .+||++|+++. ++.+||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++
T Consensus 8 ~~~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 80 (528)
T PRK07470 8 NLAHFLRQAAR-RFPDRIALVWG------DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRL 80 (528)
T ss_pred CHHHHHHHHHH-HCCCceEEEEC------CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 36688888888 89999999975 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++++++... +.+....... .....++.+....
T Consensus 81 G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~--------- 138 (528)
T PRK07470 81 GAVWVPTNFRQTPDEVAYLAEASGARAMICHADFP---------EHAAAVRAAS----PDLTHVVAIGGAR--------- 138 (528)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCceEEEEcchhH---------HHHHHHHhhC----CcCceEEEeCCCc---------
Confidence 99999999999999999999999999999987642 1111111111 2334444443211
Q ss_pred CCCCccchhhhcCCC-CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHh-CCCCCcEEEEecCc
Q 004348 361 QDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAF-DYKPSDVYWCTADC 438 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~-~l~~~d~~l~~~~l 438 (759)
....|.+..... ..........++++++|+|||||||.||||+++|++++..........+ ++.++|+++..+|+
T Consensus 139 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~ 215 (528)
T PRK07470 139 ---AGLDYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPL 215 (528)
T ss_pred ---ccccHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccc
Confidence 012333333221 1112223456789999999999999999999999995433222222222 56788999999999
Q ss_pred chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 439 ~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
+|..++ ..+ ..++.|+++++.+.. .++++.+++.|+++++|++.++|++++.|.+... ....+++++|.+++||
T Consensus 216 ~~~~~~-~~~-~~~~~g~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gG 289 (528)
T PRK07470 216 SHGAGI-HQL-CQVARGAATVLLPSE--RFDPAEVWALVERHRVTNLFTVPTILKMLVEHPA--VDRYDHSSLRYVIYAG 289 (528)
T ss_pred hhHHHH-HHH-HHHhcCceEEEeccc--CcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcC--cCCCCCcceEEEEEcC
Confidence 999885 334 467888888887643 2488999999999999999999999999987643 2335678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC------CCCCCCCCcCCCCCCceEEEECCCCcccCCCce
Q 004348 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG------AWPQKPGSATFPFFGVQPVIVDEKGVEIEGECS 592 (759)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~------~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~ 592 (759)
+++++.+.+++.+.+| .++++.||+||+++.++..... ......+++|+|++|+.++|+|+++++++.|+.
T Consensus 290 ~~l~~~~~~~~~~~~g---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~ 366 (528)
T PRK07470 290 APMYRADQKRALAKLG---KVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET 366 (528)
T ss_pred CCCCHHHHHHHHHHhC---cHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc
Confidence 9999999999988887 6799999999998755432111 012245689999999999999999999999999
Q ss_pred EEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCc
Q 004348 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQ 653 (759)
Q Consensus 593 GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~ 653 (759)
|||+|+| +.++.||+++++.+...|. +|||+|||+++ +|+||+|.|||++|.++|.
T Consensus 367 Gel~i~~--~~~~~gy~~~~~~~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~ 441 (528)
T PRK07470 367 GEICVIG--PAVFAGYYNNPEANAKAFR---DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPA 441 (528)
T ss_pred eEEEEeC--CccchhhcCCHHHHHhhhc---CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCC
Confidence 9999999 8999999999998877652 78999999988 7999999999999999999
Q ss_pred cceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 654 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 654 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
|.+|+|++.+++..++.++++++..++...+ .++++++|+++||+|++|..++++++||+|++||++|+.|++++.+
T Consensus 442 v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~ 518 (528)
T PRK07470 442 VSEVAVLGVPDPVWGEVGVAVCVARDGAPVD---EAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEE 518 (528)
T ss_pred ceEEEEEeccCcccCceeEEEEEECCCCCCC---HHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHh
Confidence 9999999999887788899999987765433 5789999999999999999999999999999999999999998875
Q ss_pred c
Q 004348 734 Q 734 (759)
Q Consensus 734 ~ 734 (759)
.
T Consensus 519 ~ 519 (528)
T PRK07470 519 R 519 (528)
T ss_pred c
Confidence 4
No 52
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-62 Score=560.55 Aligned_cols=460 Identities=26% Similarity=0.351 Sum_probs=384.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++++.|++++. .+||++|+++. .+.+||+||.++++++|++|.+.|+++||+|++++++++++++++|||+++
T Consensus 3 ~~~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~ 75 (483)
T PRK03640 3 TMPNWLKQRAF-LTPDRTAIEFE------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQL 75 (483)
T ss_pred cHHHHHHHHHH-hCCCceEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhC
Confidence 47788999998 89999999976 688999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++..++++++++++|+++..... .... ..
T Consensus 76 G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~-------------~~~~----~~-------------------- 118 (483)
T PRK03640 76 GAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAK-------------LIPG----IS-------------------- 118 (483)
T ss_pred CcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHH-------------Hhhh----cc--------------------
Confidence 9999999999999999999999999999997653210 0000 00
Q ss_pred CCCCccchhhhcCCC-CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 361 QDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
..|.+..... ..........++++++|+|||||||.||||+++|++++... ......++++++|++++..|++
T Consensus 119 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~-~~~~~~~~~~~~d~~l~~~p~~ 192 (483)
T PRK03640 119 -----VKFAELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSA-VGSALNLGLTEDDCWLAAVPIF 192 (483)
T ss_pred -----ccHHHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHH-HHHHHhcCCCcCcEEEEecCHH
Confidence 0011111100 01111123467899999999999999999999999965543 3344458899999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++ ..++.+|+.|+++++.+. .++..+++.|+++++|++.++|+++..|....... ....+||.+++||+
T Consensus 193 ~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~---~~~~~lr~~~~~g~ 264 (483)
T PRK03640 193 HISGL-SILMRSVIYGMRVVLVEK----FDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG---TYPSSFRCMLLGGG 264 (483)
T ss_pred HHHHH-HHHHHHHhcCCEEEecCC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc---ccCCcceEEEEcCC
Confidence 98885 457889999999999864 48999999999999999999999999998654321 23468999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEec
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g 599 (759)
++++++++++.+. + +++++.||+||++...+...........+++|+|+++++++|+|+ +++++.|+.|||+|+|
T Consensus 265 ~~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~-~~~~~~g~~Gel~v~g 339 (483)
T PRK03640 265 PAPKPLLEQCKEK-G---IPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD-GVVVPPFEEGEIVVKG 339 (483)
T ss_pred CCCHHHHHHHHHh-C---CCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC-CCcCCCCCceEEEEEC
Confidence 9999999988774 4 889999999998764433222222345688999999999999986 4899999999999999
Q ss_pred CCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEE
Q 004348 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVV 660 (759)
Q Consensus 600 ~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv 660 (759)
|+++.||+++++.+...| .+|||+|||+++ +|.+|++.|||+++.++|.|.+++|+
T Consensus 340 --~~~~~gy~~~~~~~~~~~---~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~ 414 (483)
T PRK03640 340 --PNVTKGYLNREDATRETF---QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVV 414 (483)
T ss_pred --cchhhhhcCCHHHHHHHH---hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEE
Confidence 899999999999888776 268999999988 89999999999999999999999999
Q ss_pred eEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 661 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 661 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+.+++..++.++++++...... .++++++++++|++|++|..|+++++||+|++||++|++|++.++.
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 415 GVPDDKWGQVPVAFVVKSGEVT-----EEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred eCCCcccCCceEEEEEeCCCCC-----HHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 9988877888889888654332 5779999999999999999999999999999999999999998763
No 53
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=4e-62 Score=566.99 Aligned_cols=500 Identities=21% Similarity=0.278 Sum_probs=404.2
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+|+++|+++.+ .++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 17 ~l~~~l~~~~~-~~~~~~ai~~~~----~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 91 (559)
T PRK08315 17 TIGQLLDRTAA-RYPDREALVYRD----QGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKI 91 (559)
T ss_pred cHHHHHHHHHH-HCCCCeEEEEcC----CCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHh
Confidence 58899999998 899999999852 2578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhh---------cCCCccEEEEeccCc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK---------SGISVDVCLTYENQS 351 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~vi~~~~~~ 351 (759)
|++++|++|.++.+++..++++++++++|+++..... .....+.+....+.. .-+....++.++...
T Consensus 92 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 92 GAILVTINPAYRLSELEYALNQSGCKALIAADGFKDS----DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred CeEEEecCccCCHHHHHHHHHhcCCCEEEEecccccc----chHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 9999999999999999999999999999998764211 111111111111100 001122333322211
Q ss_pred cccccccccCCCCccchhhhcCCC------CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKY------PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD 425 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~ 425 (759)
......|.+..... ..........++++++|+|||||||.||||.++|++++ .........++
T Consensus 168 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~-~~~~~~~~~~~ 236 (559)
T PRK08315 168 ----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNIL-NNGYFIGEAMK 236 (559)
T ss_pred ----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHH-HHHHHHHHhcC
Confidence 00112233322111 00111223457889999999999999999999999954 44555566789
Q ss_pred CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccccc
Q 004348 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (759)
Q Consensus 426 l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~ 505 (759)
++++|+++...|+.|..++.+.++.+|..|+++++.... +++..+++.++++++|++.++|+++..++.... ...
T Consensus 237 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~--~~~ 311 (559)
T PRK08315 237 LTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEG---FDPLATLAAVEEERCTALYGVPTMFIAELDHPD--FAR 311 (559)
T ss_pred CCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCC---CCHHHHHHHHHHcCCeEEecchHHHHHHHhCcc--cCC
Confidence 999999999999999998888889999999999965432 489999999999999999999999988887643 233
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC-CCCCCCCCcCCCCCCceEEEECCC-
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-AWPQKPGSATFPFFGVQPVIVDEK- 583 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~~iG~p~~g~~~~IvD~~- 583 (759)
.++++||.+++||+++++++++++.+.++ ..++++.||+||++.+++..... ....+..++|+|++|+.++|+|++
T Consensus 312 ~~~~~lr~~~~~G~~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~ 389 (559)
T PRK08315 312 FDLSSLRTGIMAGSPCPIEVMKRVIDKMH--MSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPET 389 (559)
T ss_pred CCchhhheeEecCCCCCHHHHHHHHHHcC--CcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCcc
Confidence 46789999999999999999999999987 35699999999998755433221 112356789999999999999987
Q ss_pred CcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHH
Q 004348 584 GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEV 644 (759)
Q Consensus 584 g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eI 644 (759)
+++++.|+.|||+|+| +++++|||++++.+...|. .++||+|||+++ +|+||+|.||
T Consensus 390 ~~~~~~g~~GEl~v~g--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eI 465 (559)
T PRK08315 390 GETVPRGEQGELCTRG--YSVMKGYWNDPEKTAEAID--ADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREI 465 (559)
T ss_pred CCcCCCCCceEEEEEC--chhhhhhcCChhHHhhcCC--CCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHH
Confidence 9999999999999999 8999999999988876653 378999999987 7999999999
Q ss_pred HHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccH
Q 004348 645 ESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMR 724 (759)
Q Consensus 645 E~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR 724 (759)
|++|.++|+|.+++|++++++..++.+++||++.++...+ .++++++++++||.|++|..|+++++||+|++||++|
T Consensus 466 E~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r 542 (559)
T PRK08315 466 EEFLYTHPKIQDVQVVGVPDEKYGEEVCAWIILRPGATLT---EEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQK 542 (559)
T ss_pred HHHHHhCCCceEEEEEecCCCCCCeEEEEEEEeCCCCCCC---HHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeH
Confidence 9999999999999999998887788899999987654433 5789999999999999999999999999999999999
Q ss_pred HHHHHHHhcc
Q 004348 725 RILRKIASRQ 734 (759)
Q Consensus 725 ~~L~~~~~~~ 734 (759)
++|++++...
T Consensus 543 ~~L~~~~~~~ 552 (559)
T PRK08315 543 FKMREMMIEE 552 (559)
T ss_pred HHHHHHHHhh
Confidence 9999987754
No 54
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.1e-62 Score=560.58 Aligned_cols=478 Identities=24% Similarity=0.343 Sum_probs=395.3
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
.+.+++.+++ .+|+++|+.+.+ ++.+||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++
T Consensus 4 ~l~~~~~~~~--~~~~~~a~~~~~-----~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~ 76 (504)
T PRK07514 4 NLFDALRAAF--ADRDAPFIETPD-----GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRA 76 (504)
T ss_pred cHHHHHHHHh--hCCCCeEEEeCC-----CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 4677777766 489999998742 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++..++++++++++|+++... ..+...... .....++.++...
T Consensus 77 G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~--------- 133 (504)
T PRK07514 77 GAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANF---------AWLSKIAAA-----AGAPHVETLDADG--------- 133 (504)
T ss_pred CcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchh---------HHHHHhhhc-----cCCceEEEecCCC---------
Confidence 99999999999999999999999999999986532 111111111 1222233332211
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
...+.+.....+.........++++++|+|||||||.||||+++|++++ .........+++.++|++++..|+.|
T Consensus 134 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~-~~~~~~~~~~~~~~~d~~l~~~p~~~ 208 (504)
T PRK07514 134 ----TGSLLEAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLL-SNALTLVDYWRFTPDDVLIHALPIFH 208 (504)
T ss_pred ----cccHHHhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHH-HHHHHHHHHhCCCCccEEEEecchHH
Confidence 0011111111122222334568899999999999999999999999955 44555566788999999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++.+.++.+++.|+++++.+. .++..+++.+. ++|++..+|+++..++.... .....++++|.+++||++
T Consensus 209 ~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~--~~~~~~~~lr~~~~gg~~ 280 (504)
T PRK07514 209 THGLFVATNVALLAGASMIFLPK----FDPDAVLALMP--RATVMMGVPTFYTRLLQEPR--LTREAAAHMRLFISGSAP 280 (504)
T ss_pred HHHHHHHHHHHHhcCcEEEECCC----CCHHHHHHHHH--hheeeecHHHHHHHHHcCCC--CCcccccceeeEEecCCC
Confidence 98877788899999999999854 38899999994 79999999999998887643 233467899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC-CCCcccCCCceEEEEEec
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD-~~g~~vp~g~~GEL~I~g 599 (759)
++++++++|.+.++ .++++.||+||++...+.... .....+++|.|+++++++|+| +++++++.|+.|||+|+|
T Consensus 281 ~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~--~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~ 355 (504)
T PRK07514 281 LLAETHREFQERTG---HAILERYGMTETNMNTSNPYD--GERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKG 355 (504)
T ss_pred CCHHHHHHHHHHhC---CcceeecccccccccccCCcc--ccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEec
Confidence 99999999999887 689999999999865443221 123457899999999999999 799999999999999999
Q ss_pred CCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEE
Q 004348 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVV 660 (759)
Q Consensus 600 ~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv 660 (759)
++++.||+++++.+.+.|.. +|||+|||+++ +|+||+|.|||++|.++++|.+++|+
T Consensus 356 --~~~~~gy~~~~~~~~~~~~~--~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~ 431 (504)
T PRK07514 356 --PNVFKGYWRMPEKTAEEFRA--DGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVI 431 (504)
T ss_pred --CCccccccCCchhhhhhccc--CCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEE
Confidence 89999999999988877643 68999999987 89999999999999999999999999
Q ss_pred eEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 661 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 661 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+++++..++.++++++..++...+ .++|+++++++|++|++|..|++++++|+|++||++|++|++.+.+
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~ 501 (504)
T PRK07514 432 GVPHPDFGEGVTAVVVPKPGAALD---EAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYAD 501 (504)
T ss_pred eCCCCCcCceEEEEEEECCCCCCC---HHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHh
Confidence 998887788999999987655433 5789999999999999999999999999999999999999998764
No 55
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.6e-63 Score=585.51 Aligned_cols=510 Identities=19% Similarity=0.241 Sum_probs=382.0
Q ss_pred ccHHHHHHhhcccccCCCeEEEEEE---cCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHH
Q 004348 199 TNICYNCLDRNIEAGLGDKVAIYWE---ANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAML 275 (759)
Q Consensus 199 ~n~~~~~l~~~~~~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~L 275 (759)
..+++++|+++++ ++|+++|+.+. +...+..+.+||+||.++++++|++|+++|+++||+|+|+++|++||++++|
T Consensus 42 ~~t~~~~l~~~~~-~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 120 (660)
T PLN02861 42 IDSPWQFFSDAVK-KYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAME 120 (660)
T ss_pred CCCHHHHHHHHHH-hCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3478899999998 89999999753 1111334689999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccc
Q 004348 276 ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (759)
Q Consensus 276 A~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (759)
||+++|++++||++.++.+++.++|++++++++|+++... ..+......+ ...++.++.++.......
T Consensus 121 A~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~---------~~~~~~~~~~---~~~l~~ii~~~~~~~~~~ 188 (660)
T PLN02861 121 ACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI---------SSILSCLPKC---SSNLKTIVSFGDVSSEQK 188 (660)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH---------HHHHHhhhhC---CCCCEEEEEECCCChhhh
Confidence 9999999999999999999999999999999999865421 1121111111 124566666543210000
Q ss_pred cccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC-----CCCCc
Q 004348 356 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-----YKPSD 430 (759)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~-----l~~~d 430 (759)
............|.+...............++|+++|+|||||||.||||++||++++.+ .......++ +.++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~-~~~~~~~~~~~~~~~~~~d 267 (660)
T PLN02861 189 EEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAE-VLSTDHLLKVTDRVATEED 267 (660)
T ss_pred hhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHH-HHHHHhccccccccCCCCC
Confidence 000000001133444433221111222356899999999999999999999999996544 333333333 46789
Q ss_pred EEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcC-----------
Q 004348 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDG----------- 499 (759)
Q Consensus 431 ~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~----------- 499 (759)
++++++|++|.++..+. +.+|+.|+++++.. +++..+++.|+++++|+++++|+++..|.+..
T Consensus 268 ~~l~~lPl~H~~~~~~~-~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~ 341 (660)
T PLN02861 268 SYFSYLPLAHVYDQVIE-TYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLR 341 (660)
T ss_pred EEEEECcHHHHHHHHHH-HHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHH
Confidence 99999999999986654 45799999998873 37899999999999999999999999886410
Q ss_pred ------------------------CcccccC-------CC-CCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccc
Q 004348 500 ------------------------NEYVTRY-------SR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQT 547 (759)
Q Consensus 500 ------------------------~~~~~~~-------~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~T 547 (759)
....... .+ .+||.+++||+++++++. +|.+.++ ...+++.||+|
T Consensus 342 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~--~~~l~~~YG~T 418 (660)
T PLN02861 342 KKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTS--CSVLSQGYGLT 418 (660)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHc--CCCeeEecchh
Confidence 0000000 12 589999999999999975 4666666 25799999999
Q ss_pred cccceecccCCCCCCCCCCCcCCCCCCceEEEEC--CCC-cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCC
Q 004348 548 ETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD--EKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFP 624 (759)
Q Consensus 548 E~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD--~~g-~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~ 624 (759)
|+++.++...... ..+.+++|+|+++++++|+| ++| ..++.+..|||+|+| |+++.|||++|+.|.+.|. +
T Consensus 419 E~~~~~~~~~~~~-~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrG--p~v~~GY~~~pe~T~~~f~---d 492 (660)
T PLN02861 419 ESCGGCFTSIANV-FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRG--NTLFSGYHKRQDLTEEVLI---D 492 (660)
T ss_pred hhhhceeeccccc-CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcC--CcccccccCCHHHHHhhhh---c
Confidence 9986554332221 23568999999999999997 344 344556689999999 8999999999999998872 7
Q ss_pred cEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCC----
Q 004348 625 GYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG---- 680 (759)
Q Consensus 625 g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~---- 680 (759)
|||+|||+|+ +|++|+|.|||++|.+||.|.+|+|++.+ .++.++|+|++...
T Consensus 493 Gw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~---~~~~~~A~vv~~~~~l~~ 569 (660)
T PLN02861 493 GWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNS---FESFLVAVVVPDRQALED 569 (660)
T ss_pred cCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecC---CcceeEEEEEcCHHHHHH
Confidence 9999999998 69999999999999999999999999875 34679999998632
Q ss_pred ------CCCc-H------HHHHHHHHHHHh-----hcCCCccccEEEEeC-CC-----CCCCCCcccHHHHHHHHhcccC
Q 004348 681 ------VPYS-E------ELRKSLVLAVRK-----QIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRILRKIASRQLD 736 (759)
Q Consensus 681 ------~~~~-~------~l~~~l~~~l~~-----~Lp~~~vP~~iv~v~-~l-----P~T~~GKvdR~~L~~~~~~~~~ 736 (759)
...+ . .....+.+.+.+ .|+.|..++.|.+++ .| .+|+++|+.|+.+.+.|..+++
T Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~ 649 (660)
T PLN02861 570 WAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCID 649 (660)
T ss_pred HHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHH
Confidence 0000 1 122334444433 489999999999966 46 7999999999999999998888
Q ss_pred CCCC
Q 004348 737 ELGD 740 (759)
Q Consensus 737 ~~~~ 740 (759)
++++
T Consensus 650 ~lY~ 653 (660)
T PLN02861 650 QLYS 653 (660)
T ss_pred HHHH
Confidence 7664
No 56
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.3e-63 Score=581.37 Aligned_cols=493 Identities=19% Similarity=0.172 Sum_probs=382.8
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcC---CCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEAN---DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~---~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~ 277 (759)
++.++|+++++ .+||++|+++.+. ..+..+.+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||
T Consensus 22 ~l~~~l~~~a~-~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA~ 99 (631)
T PRK07769 22 NLVRHVERWAK-VRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFGA 99 (631)
T ss_pred CHHHHHHHHHH-hCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHHH
Confidence 57888999888 8999999997531 112246899999999999999999987 899999999999999999999999
Q ss_pred HHhCCeEEec-CCCCC--HHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc
Q 004348 278 ARIGAVHSVV-FAGFS--SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (759)
Q Consensus 278 ~kaGav~vpl-dp~~~--~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (759)
+++|++++|+ ++..+ .+++.+++++++++++|+++... +.+........ ......++.++...
T Consensus 100 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~--- 165 (631)
T PRK07769 100 LYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSA---------EGVRKFFRARP--AKERPRVIAVDAVP--- 165 (631)
T ss_pred HHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHH---------HHHHHHHhhcc--ccccceEEEccccc---
Confidence 9999999999 56665 68999999999999999976531 11222111110 00112233222110
Q ss_pred ccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEE
Q 004348 355 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWC 434 (759)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~ 434 (759)
+... .........++++++|+|||||||+||||+++|++++.+ .......+++.++|++++
T Consensus 166 ---------------~~~~---~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~l~ 226 (631)
T PRK07769 166 ---------------DEVG---ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTN-VLQVIDALEGQEGDRGVS 226 (631)
T ss_pred ---------------cccc---cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHH-HHHHHHHcCCCCcceEEE
Confidence 0000 001111346789999999999999999999999995544 444556688899999999
Q ss_pred ecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC---cEEEehHHHHHHHHhc---CCcccccCCC
Q 004348 435 TADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV---TIFYTAPTLVRSLMRD---GNEYVTRYSR 508 (759)
Q Consensus 435 ~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v---T~l~~~Ps~l~~l~~~---~~~~~~~~~l 508 (759)
.+|++|+.++. .++.+++.|+++++........++..+++.++++++ |++..+|+++..+... ........++
T Consensus 227 ~~Pl~h~~gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l 305 (631)
T PRK07769 227 WLPFFHDMGLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDL 305 (631)
T ss_pred eCCCcCchhhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcch
Confidence 99999999964 456678889999987542222388899999999986 7899999987766543 1111113578
Q ss_pred CCeeEEEEeCCCCCHHHHHHHHHHhCC---CCccEeeeeccccccceecccCCCCC------------------------
Q 004348 509 KSLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAW------------------------ 561 (759)
Q Consensus 509 ~sLr~v~~gGe~l~~~~~~~~~~~~g~---~~~~l~n~YG~TE~~~~~~~~~~~~~------------------------ 561 (759)
++||.+++||++++++++++|.+.++. +...++|.||+||++.+++.......
T Consensus 306 ~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 385 (631)
T PRK07769 306 SNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAP 385 (631)
T ss_pred hheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCC
Confidence 999999999999999999999998742 23469999999999865543211100
Q ss_pred -CCCCCCcCCCCCCceEEEEC-CCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc---------------cCC
Q 004348 562 -PQKPGSATFPFFGVQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK---------------PFP 624 (759)
Q Consensus 562 -~~~~~~iG~p~~g~~~~IvD-~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~---------------~~~ 624 (759)
.....++|+|++++.++|+| ++++++|.|+.|||+|+| |+++.|||++++.+.+.|.. ..+
T Consensus 386 ~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~g--p~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~ 463 (631)
T PRK07769 386 NAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHG--NNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDA 463 (631)
T ss_pred CceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecC--CCccccccCChhHHHHHHhhhcccccccccccCcccCC
Confidence 01124799999999999999 478999999999999999 89999999999999888753 124
Q ss_pred cEEEeCCeee------------------ccEeeCHHHHHHHHhc-CCccce--EEEEeEec-------------------
Q 004348 625 GYYFTGDGCS------------------SGHRIGTAEVESALVS-HPQCAE--AAVVGVEH------------------- 664 (759)
Q Consensus 625 g~y~TGDl~~------------------~G~rI~~~eIE~~L~~-~p~V~e--a~Vv~~~~------------------- 664 (759)
|||+|||+|+ +|+||+|.|||++|.+ ||.|.+ ++|+++++
T Consensus 464 gw~~TGDlg~~~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~ 543 (631)
T PRK07769 464 LWVRTGDYGVYFDGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDP 543 (631)
T ss_pred CeeeccccccEECCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEeccccccccccccccccccccc
Confidence 8999999987 8999999999999996 899998 99999988
Q ss_pred CCCCeEEEEEEEEcCCC-CCcHHHHHHHHHHHHhhcCC-Cc-cccEEEEeC--CCCCCCCCcccHHHHHHHHhcc
Q 004348 665 EVKGQGIYAFVTLVEGV-PYSEELRKSLVLAVRKQIGA-FA-APDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 665 ~~~~~~lva~Vv~~~~~-~~~~~l~~~l~~~l~~~Lp~-~~-vP~~iv~v~--~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
+..++.++++|+++++. ..+ .++|.++++++|+. |+ .|+.+++++ +||+|++|||+|++|++.+...
T Consensus 544 ~~~ge~~~a~v~~~~~~~~~~---~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~ 615 (631)
T PRK07769 544 EDTSEQLVIVAERAPGAHKLD---PQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDG 615 (631)
T ss_pred CCCCccEEEEEEecCcccccc---HHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcC
Confidence 45788999999988753 222 57889999999985 56 488888887 6999999999999999987644
No 57
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-62 Score=560.15 Aligned_cols=461 Identities=21% Similarity=0.264 Sum_probs=383.0
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
+.+.|+++++ ++||++|+++. ++.+||.||.++++++|++|.+.|. +|++|+|+++|++++++++|||+++|
T Consensus 3 ~~~~~~~~a~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G 74 (487)
T PRK07638 3 ITKEYKKHAS-LQPNKIAIKEN------DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAG 74 (487)
T ss_pred hHHHHHHHHH-hCCCCeEEecC------CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 5677888888 89999999976 6789999999999999999999985 89999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC
Q 004348 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (759)
Q Consensus 282 av~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (759)
++++|+++.++.+++.++++.++++++|+++..... +. . .. ..++.++.
T Consensus 75 ~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~---------~~----~-----~~-~~~~~~~~------------ 123 (487)
T PRK07638 75 WTCVPLDIKWKQDELKERLAISNADMIVTERYKLND---------LP----D-----EE-GRVIEIDE------------ 123 (487)
T ss_pred eEEEecCccCCHHHHHHHHHhCCCCEEEEecccccc---------hh----h-----cc-ceEEEehh------------
Confidence 999999999999999999999999999998753211 00 0 00 11222211
Q ss_pred CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchh
Q 004348 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (759)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~ 441 (759)
|.+................+++++|+|||||||.||||+++|++++.+ .......+++.++|+++...++.|.
T Consensus 124 ------~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~d~~~~~~~l~~~ 196 (487)
T PRK07638 124 ------WKRMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHS-FDCNVHDFHMKREDSVLIAGTLVHS 196 (487)
T ss_pred ------hhhhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHH-HHHHHHhcCcCCCCEEEEeecchHH
Confidence 111111111111111223567899999999999999999999996544 4455566889999999999999998
Q ss_pred chhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCC
Q 004348 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (759)
Q Consensus 442 ~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (759)
.+ .+.++.+|..|+++++.+. +++..+++.|+++++|++.++|+++..|.+... ...+.+.++++|+++
T Consensus 197 ~~-l~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------~~~~~~~~~~~G~~l 265 (487)
T PRK07638 197 LF-LYGAISTLYVGQTVHLMRK----FIPNQVLDKLETENISVMYTVPTMLESLYKENR------VIENKMKIISSGAKW 265 (487)
T ss_pred HH-HHHHHHHHccCcEEEEcCC----CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC------cCCceeEEEEcCCCC
Confidence 76 4678899999999998754 489999999999999999999999999987632 234566678899999
Q ss_pred CHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCC
Q 004348 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (759)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~ 601 (759)
++++.+++.+.++ ++++++.||+||++.+..... .....+.+++|+|++|+.++|+|++|++++.|+.|||+|+|
T Consensus 266 ~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~-- 340 (487)
T PRK07638 266 EAEAKEKIKNIFP--YAKLYEFYGASELSFVTALVD-EESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKS-- 340 (487)
T ss_pred CHHHHHHHHHHcC--CCeEEEEecCCccCceEEecc-cccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEec--
Confidence 9999999999986 588999999999987654332 22234667899999999999999999999999999999999
Q ss_pred CcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeE
Q 004348 602 PGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGV 662 (759)
Q Consensus 602 ~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~ 662 (759)
+.++.||+++++.+... + .+|||+|||+++ +|++|+|.|||++|.+||+|.+|+|++.
T Consensus 341 ~~~~~gy~~~~~~~~~~-~--~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~ 417 (487)
T PRK07638 341 PQFFMGYIIGGVLAREL-N--ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGV 417 (487)
T ss_pred ccceeeecCCHHHHhhh-c--cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEec
Confidence 88999999999876553 2 378999999987 8999999999999999999999999999
Q ss_pred ecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 663 EHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 663 ~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
+++..++.++++|+.. .. .++|+++++++|++|++|..|+++++||+|++||++|++|++++...
T Consensus 418 ~~~~~g~~~~~~v~~~----~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 418 PDSYWGEKPVAIIKGS----AT---KQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred CchhcCCeeEEEEECC----CC---HHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcc
Confidence 9888888899988742 12 57899999999999999999999999999999999999999987654
No 58
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-62 Score=569.97 Aligned_cols=504 Identities=18% Similarity=0.223 Sum_probs=399.5
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|++++. .+|++.|+++.++ ..+.+||+||.++++++|++|.+ .|+++||+|+++++|+++++++++||++
T Consensus 11 ~~~~~l~~~a~-~~~~~~a~~~~~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 11 SLTRILEYGST-VHGDTTVTTWGGA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred cHHHHHHHHHH-hCCCceEEEEcCC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 47889999988 8999999998632 26899999999999999999986 8999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|++|.++.+++.+++++++++++|+++.. .+.+.+....+ +..+.++.++...... ....
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~---------~~~~~~~~~~~----~~~~~i~~~~~~~~~~-~~~~ 152 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRL---------AEQLGEILKEC----PCVRAVVFIGPSDADS-AAAH 152 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhh---------HHHHHHHHhhC----ccccEEEEecCccccc-chhc
Confidence 99999999999999999999999999999997653 22333333333 3444455443221000 0000
Q ss_pred c-CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHH-HHHHHhCCCCCcEEEEecC
Q 004348 360 W-QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT-TFKYAFDYKPSDVYWCTAD 437 (759)
Q Consensus 360 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~-~~~~~~~l~~~d~~l~~~~ 437 (759)
. ......+|.++........+.....++++++|+|||||||.||||+++|+++...... .....+++.+++++++.+|
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p 232 (576)
T PRK05620 153 MPEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVP 232 (576)
T ss_pred cccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCC
Confidence 0 0112234666554333222233456789999999999999999999999995443222 1223478889999999999
Q ss_pred cchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEe
Q 004348 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (759)
Q Consensus 438 l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~g 517 (759)
+.|+.++ ..++.++..|+++++.... +++..+++.|+++++|++..+|+++..|+..... ...+..+||.+++|
T Consensus 233 l~h~~g~-~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~~g 306 (576)
T PRK05620 233 IYHVLSW-GVPLAAFMSGTPLVFPGPD---LSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLK--NPPERMSLQEIYVG 306 (576)
T ss_pred hHHhhhh-HHHHHHHhcCceEEecCCC---CCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhc--cCcccCceeEEEEc
Confidence 9999985 5678899999999887532 4889999999999999999999999888764321 11234689999999
Q ss_pred CCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC--C----CCCCCCcCCCCCCceEEEECCCCcccC--C
Q 004348 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--W----PQKPGSATFPFFGVQPVIVDEKGVEIE--G 589 (759)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~--~----~~~~~~iG~p~~g~~~~IvD~~g~~vp--~ 589 (759)
|++++++++++|.+.++ +++++.||+||++...+...+.. . .....++|++.++++++|+|+ +++++ .
T Consensus 307 G~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~ 382 (576)
T PRK05620 307 GSAVPPILIKAWEERYG---VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTD 382 (576)
T ss_pred CCCCCHHHHHHHHHHhC---CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCC
Confidence 99999999999999887 78999999999987544322111 0 012347899999999999997 77765 4
Q ss_pred CceEEEEEecCCCcccccccCChhhH----Hhhhcc----------cCCcEEEeCCeee-------------------cc
Q 004348 590 ECSGYLCIKSSWPGAFRTLYGDHERY----ETTYFK----------PFPGYYFTGDGCS-------------------SG 636 (759)
Q Consensus 590 g~~GEL~I~g~~~~v~~GY~~~~e~~----~~~~~~----------~~~g~y~TGDl~~-------------------~G 636 (759)
+..|||+|+| +.++.|||++++.+ ...|.. ..+|||+|||+++ +|
T Consensus 383 ~~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G 460 (576)
T PRK05620 383 RNEGEIQVRG--NWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGG 460 (576)
T ss_pred CCceEEEEEc--CcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCC
Confidence 6889999999 88999999999766 222210 1368999999988 89
Q ss_pred EeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCC
Q 004348 637 HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPK 716 (759)
Q Consensus 637 ~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~ 716 (759)
++|+|.|||++|.+||.|.+|+|++.+++..++.+++++++.++...++...++|+++|+++||+|++|+.|+++++||+
T Consensus 461 ~~i~~~eIE~~l~~~p~v~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~ 540 (576)
T PRK05620 461 EWIYSAQLENYIMAAPEVVECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDK 540 (576)
T ss_pred EEEcHHHHHHHHhcCCCceEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCC
Confidence 99999999999999999999999999998888899999998876543333368899999999999999999999999999
Q ss_pred CCCCcccHHHHHHHHhcc
Q 004348 717 TRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 717 T~~GKvdR~~L~~~~~~~ 734 (759)
|.+||++|++|++++...
T Consensus 541 t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 541 TSVGKFDKKDLRQHLADG 558 (576)
T ss_pred CCcccCcHHHHHHHHhcC
Confidence 999999999999998843
No 59
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=3.9e-62 Score=560.43 Aligned_cols=486 Identities=28% Similarity=0.403 Sum_probs=402.3
Q ss_pred cccHHHHHHhhc-ccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHH
Q 004348 198 ITNICYNCLDRN-IEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLA 276 (759)
Q Consensus 198 ~~n~~~~~l~~~-~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA 276 (759)
.+|.+.++++++ ++ .+||++|++.. .+.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a 74 (508)
T TIGR02262 2 KYNAAEDLLDRNVVE-GRGGKTAFIDD------ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLG 74 (508)
T ss_pred cchHHHHHHHHHHhc-ccCCceEEEeC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 357899999987 45 79999999865 67899999999999999999999999999999999999999999999
Q ss_pred HHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccc
Q 004348 277 CARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRE 356 (759)
Q Consensus 277 ~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~ 356 (759)
|+++|++++|+++.++.+++.++++.++++++|+++... ..+.+....+ +....++..+...
T Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~----- 136 (508)
T TIGR02262 75 AIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL---------PVIKAALGKS----PHLEHRVVVGRPE----- 136 (508)
T ss_pred HHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH---------HHHHHHHhcC----CCccEEEEeCCCC-----
Confidence 999999999999999999999999999999999976532 2222222222 3444444433211
Q ss_pred ccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEec
Q 004348 357 NTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (759)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~ 436 (759)
.....+.+...............++++++|+|||||||.||||+++|+++...........++++++|+++...
T Consensus 137 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 210 (508)
T TIGR02262 137 ------AGEVQLAELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAA 210 (508)
T ss_pred ------cccccHHHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcC
Confidence 01122333332222222223456789999999999999999999999996554433245567899999999999
Q ss_pred CcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEE
Q 004348 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 516 (759)
Q Consensus 437 ~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~ 516 (759)
|++|+.++...++.++..|+++++.++. +++..+++.|+++++|++.++|+++..++.... .......++|.+++
T Consensus 211 p~~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~--~~~~~~~~l~~~~~ 285 (508)
T TIGR02262 211 KLFFAYGLGNALTFPMSVGATTVLMGER---PTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPN--LPAEDQVRLRLCTS 285 (508)
T ss_pred chHHHHHHHHHHHHHHHcCceEEEeCCC---CCHHHHHHHHHHHCCcEEecchHHHHHHhcCcc--ccccccccceeEEE
Confidence 9999988777788899999999998653 488999999999999999999999988876532 12234678999999
Q ss_pred eCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEE
Q 004348 517 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLC 596 (759)
Q Consensus 517 gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~ 596 (759)
||+++++++++.|.+.++ +++++.||+||++...+..... ..+.+++|+|++|+.++|+|+++++++.|+.|||+
T Consensus 286 ~G~~l~~~~~~~~~~~~~---~~v~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~ 360 (508)
T TIGR02262 286 AGEALPAEVGQRWQARFG---VDIVDGIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELL 360 (508)
T ss_pred cCCCCCHHHHHHHHHHhC---CchhhCccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEE
Confidence 999999999999999987 7899999999998755433221 23457899999999999999999999999999999
Q ss_pred EecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceE
Q 004348 597 IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEA 657 (759)
Q Consensus 597 I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea 657 (759)
|+| ++++.||+++++.+...| .++||+|||+++ +|.+|+|.|||++|.+||+|.++
T Consensus 361 i~~--~~~~~gY~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~ 435 (508)
T TIGR02262 361 ISG--PSSATMYWNNRAKTRDTF---QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEA 435 (508)
T ss_pred Eec--CccccccCCCHHHhHhhh---hcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEE
Confidence 999 899999999999887765 268999999886 79999999999999999999999
Q ss_pred EEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 658 AVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 658 ~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
++++.++....+.+++|++..++....+.+.++|+++++++|++|++|..+++++++|+|++||++|++|++
T Consensus 436 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 436 AVVGVEDEDGLIKPKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred EEEeccccCCCceeEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccC
Confidence 999988877778899999987665433344688999999999999999999999999999999999999875
No 60
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.6e-62 Score=560.97 Aligned_cols=473 Identities=23% Similarity=0.325 Sum_probs=378.7
Q ss_pred hcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEec
Q 004348 208 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 287 (759)
Q Consensus 208 ~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpl 287 (759)
.+++ .+|+++|+++.+ .++.+||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|++++|+
T Consensus 5 ~~a~-~~p~~~a~~~~~----~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 5 THAQ-IAPDRPAVIVAE----TGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhh-hCCCCcEEEecC----CCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 4555 799999998752 25789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccc
Q 004348 288 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 367 (759)
Q Consensus 288 dp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 367 (759)
++.++.+++.+++++++++++++++... ...... . ......+.+.... .....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~-~------~~~~~~~~~~~~~-----------~~~~~ 132 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALD---------GLAAKV-G------ADLPLRLSFGGEI-----------DGFGS 132 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhh---------hHHHHh-h------hccceEEEecCcc-----------ccccc
Confidence 9999999999999999999999876421 111110 0 0111112111100 00111
Q ss_pred hhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEE--ccchHHHH---HHHHHHHHhCCCCCcEEEEecCcchhc
Q 004348 368 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLH--TTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWIT 442 (759)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~--th~~~l~~---~~~~~~~~~~l~~~d~~l~~~~l~~~~ 442 (759)
+++...... +. .....++++|+|||||||.||||++ +|.++..+ ........+++..+|+++..+|++|..
T Consensus 133 ~~~~~~~~~---~~-~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~ 208 (501)
T PRK13390 133 FEAALAGAG---PR-LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAA 208 (501)
T ss_pred HHHHhcccC---CC-CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhh
Confidence 222211111 00 1122357999999999999999995 55553221 112223457889999999999999988
Q ss_pred hhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCC
Q 004348 443 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPIN 522 (759)
Q Consensus 443 g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~ 522 (759)
++.+. +..+..|+++++.+. +++..+++.|+++++|++.++|+++..|++.........+++++|.+++||++++
T Consensus 209 ~~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~ 283 (501)
T PRK13390 209 PLRWC-SMVHALGGTVVLAKR----FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCP 283 (501)
T ss_pred HHHHH-HHHHhcCceEEEcCC----cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCC
Confidence 76443 445778999988753 4899999999999999999999999998875433223456789999999999999
Q ss_pred HHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCC
Q 004348 523 PSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWP 602 (759)
Q Consensus 523 ~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~ 602 (759)
+++.+.+.+.++ .++++.||+||+++++..... ......+++|+|++| .++|+|+++++++.|+.|||+|+| +
T Consensus 284 ~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~--~ 356 (501)
T PRK13390 284 VDVKHAMIDWLG---PIVYEYYSSTEAHGMTFIDSP-DWLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFER--D 356 (501)
T ss_pred HHHHHHHHHhcC---CceeeeecccccCceEEecch-hhccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec--C
Confidence 999999999886 679999999999865443221 112356789999999 799999999999999999999999 8
Q ss_pred cccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEe
Q 004348 603 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVE 663 (759)
Q Consensus 603 ~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~ 663 (759)
+++.||+++++.+.+.+....++||+|||+|+ +|+||+|.|||++|.+||.|.+++|++++
T Consensus 357 ~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~ 436 (501)
T PRK13390 357 RLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVP 436 (501)
T ss_pred CccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEecc
Confidence 99999999999998887665578999999988 89999999999999999999999999999
Q ss_pred cCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 664 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 664 ~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
++..++.++++|++.++...++++.++|+++++++||.||+|..++++++||+|++||++|++|+
T Consensus 437 ~~~~~e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 437 DPEMGEQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred CcccCceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 98888999999998876544445567899999999999999999999999999999999999984
No 61
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=4.3e-62 Score=564.97 Aligned_cols=483 Identities=20% Similarity=0.286 Sum_probs=392.8
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+++.++|.++++ .+|+++|+++.. .++.+||+||.++++++|+.|++.|+++||+|+++++|++++++++|||++
T Consensus 28 ~~~~~~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 102 (546)
T PLN02330 28 LTLPDFVLQDAE-LYADKVAFVEAV----TGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMA 102 (546)
T ss_pred CcHHHHHhhhhh-cCCCccEEEecC----CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHH
Confidence 357888998988 899999998642 247899999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|+++.++.+++.+++++++++++|+++..... ++.+ ... ++.++...
T Consensus 103 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~-------------~~~~-----~~~-~i~~~~~~-------- 155 (546)
T PLN02330 103 AGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGK-------------VKGL-----GLP-VIVLGEEK-------- 155 (546)
T ss_pred hCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhh-------------Hhhc-----CCc-EEEecCCC--------
Confidence 99999999999999999999999999999998764311 1111 111 23332211
Q ss_pred cCCCCccchhhhcCCCCC---CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCC----CCcEE
Q 004348 360 WQDGRDIWWQDVVPKYPT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK----PSDVY 432 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~----~~d~~ 432 (759)
......|.+.+..... ..+.....++++++|+|||||||.||||+++|++++.+... ..+++. ..+++
T Consensus 156 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~---~~~~~~~~~~~~~~~ 230 (546)
T PLN02330 156 --IEGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCS---SLFSVGPEMIGQVVT 230 (546)
T ss_pred --CCCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHH---HhhccCccccCceEE
Confidence 0012334444432211 11223345789999999999999999999999996544322 223333 34678
Q ss_pred EEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCC--C
Q 004348 433 WCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK--S 510 (759)
Q Consensus 433 l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~--s 510 (759)
+...|++|..++...++.+|..|+++++.+. +++..+++.++++++|++.++|+++..|++... ....++. +
T Consensus 231 ~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--~~~~~~~~~~ 304 (546)
T PLN02330 231 LGLIPFFHIYGITGICCATLRNKGKVVVMSR----FELRTFLNALITQEVSFAPIVPPIILNLVKNPI--VEEFDLSKLK 304 (546)
T ss_pred EEecChHHHHHHHHHHHHHhhcCCEEEEecc----cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcc--ccccccchhe
Confidence 8899999988876678889999999998754 489999999999999999999999999987543 1222333 5
Q ss_pred eeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccC-CC--CCCCCCCCcCCCCCCceEEEEC-CCCcc
Q 004348 511 LRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PG--AWPQKPGSATFPFFGVQPVIVD-EKGVE 586 (759)
Q Consensus 511 Lr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~-~~--~~~~~~~~iG~p~~g~~~~IvD-~~g~~ 586 (759)
+|.+++||++++++++++|.+.++ ++++++.||+||++.+.+... +. ....+..++|+|++|++++|+| +++++
T Consensus 305 l~~i~~~g~~l~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~ 382 (546)
T PLN02330 305 LQAIMTAAAPLAPELLTAFEAKFP--GVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRS 382 (546)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHcC--CCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCcc
Confidence 799999999999999999999985 489999999999986543221 11 1112446899999999999999 57899
Q ss_pred cCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHH
Q 004348 587 IEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESA 647 (759)
Q Consensus 587 vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~ 647 (759)
+|.|+.|||+|+| +.++.||+++++.+.+.+. .+|||+|||+|+ +|+||+|.|||++
T Consensus 383 ~p~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~ 458 (546)
T PLN02330 383 LPKNTPGELCVRS--QCVMQGYYNNKEETDRTID--EDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAI 458 (546)
T ss_pred CCCCCceEEEEec--chhhhhhccCccchhhhcc--CCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHH
Confidence 9999999999999 8999999999988877653 478999999988 8999999999999
Q ss_pred HhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHH
Q 004348 648 LVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRIL 727 (759)
Q Consensus 648 L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L 727 (759)
|.+||.|.+++|++++++..++.++++|++.++...+ .++|+++++++|+.|++|+.|+++++||+|++||++|++|
T Consensus 459 l~~~~~v~~~~v~~~~~~~~g~~~~a~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L 535 (546)
T PLN02330 459 LLTHPSVEDAAVVPLPDEEAGEIPAACVVINPKAKES---EEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLL 535 (546)
T ss_pred HHhCCchheEEEEeccccccCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHH
Confidence 9999999999999999888889999999987654433 5679999999999999999999999999999999999999
Q ss_pred HHHHhcc
Q 004348 728 RKIASRQ 734 (759)
Q Consensus 728 ~~~~~~~ 734 (759)
++++...
T Consensus 536 ~~~~~~~ 542 (546)
T PLN02330 536 KEKMLSI 542 (546)
T ss_pred HHHHHhh
Confidence 9998654
No 62
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-63 Score=505.63 Aligned_cols=488 Identities=22% Similarity=0.308 Sum_probs=412.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.+.|.++++ ++||++|+++. ++.|||+||+++++++|..|+++|+++||+|.+.+||..|+++++||.+|+
T Consensus 29 ~l~d~L~~~A~-~~pdriAv~d~------~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrl 101 (542)
T COG1021 29 TLTDILTDHAA-RYPDRIAVIDG------ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRL 101 (542)
T ss_pred cHHHHHHHHHh-hcCCceEEecC------cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHc
Confidence 56788999998 89999999977 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|+++|.--|+....+|.+..+.+.|+.+|.+.... -.+..+...+.+... +.++++++.++....
T Consensus 102 Gv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~----gFd~~~~ar~~~a~~----~tlr~v~v~ge~~~~------- 166 (542)
T COG1021 102 GVAPVLALPSHRASELGAFASQIEAALLIVARQHS----GFDYRPFARELVAKH----PTLRHVIVAGEAEHP------- 166 (542)
T ss_pred CcchhhccchhhHHHHHHHHHhhcchheeechhhc----ccCcHHHHHHHHhhC----CcceEEEEccCCCCc-------
Confidence 99999988999999999999999999999876532 123344444444443 778888876543210
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
...|...........+..+.+++++||..-+.||||.||-|..||..|..+ .......++++..+++++..|..|
T Consensus 167 ----~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ys-v~aSaEiC~~~~~tvyL~~LP~AH 241 (542)
T COG1021 167 ----SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYS-VRASAEICGFDQQTVYLCALPAAH 241 (542)
T ss_pred ----chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeee-eeehhhhhCcCccceEEEeccccc
Confidence 011222222223334455678889999999999999999999999997654 444556789999999999999998
Q ss_pred hchhh-HHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 441 ITGHS-YVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 441 ~~g~~-~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
.+-++ -.+++.+..|+++|+.+. ++|+..+.+|++|+||+..++|.+...+++..+. ...+++|||.+-+||.
T Consensus 242 NfplssPG~LGv~~agG~VVla~~----psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~--~~~~LsSLrllQVGGa 315 (542)
T COG1021 242 NFPLSSPGALGVFLAGGTVVLAPD----PSPELCFPLIERHGVTVTALVPPLASLWLQAAEW--ERADLSSLRLLQVGGA 315 (542)
T ss_pred CCCCCCcchhheeeeccEEEECCC----CCHHHHHHHHHHhccceEEeccHHHHHHHHhhhc--ccCCchheeEEeecCc
Confidence 86432 267889999999999865 4899999999999999999999999999988653 5678999999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCC-CceEEEECCCCcccCCCceEEEEEe
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF-GVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~-g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
.+++++.+++...+| |.+-+.+||.|--...+ ...+..+.-..+-|+|+. .-+++|+|++|++|++|+.|+|..+
T Consensus 316 rl~~~~Arrv~~~lg---C~LQQVFGMAEGLvnyT-RLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~LltR 391 (542)
T COG1021 316 RLSATLARRVPAVLG---CQLQQVFGMAEGLVNYT-RLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLTR 391 (542)
T ss_pred ccCHHHHhhchhhhC---chHHHHhhhhhhhhccc-ccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeeec
Confidence 999999999999998 89999999999643322 222222233456799985 5689999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| |...+|||+-|+.+...|.. +|+|+|||+++ +|++|-..|||+.|+.||.|.+|++
T Consensus 392 G--PYTirGYyrap~HNa~aF~a--~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAl 467 (542)
T COG1021 392 G--PYTIRGYYRAPEHNARAFDA--DGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAAL 467 (542)
T ss_pred C--CeeeeeeccCchhhhhccCc--CCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhh
Confidence 9 89999999999998888865 89999999988 7999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh-cCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
|..+|+..|++.+|||++++.... ..+|+++|+++ |..|++|++|.+++.||+|+-||||+++|++.+..
T Consensus 468 VampDelLGEksCAfiv~~~~~~~----~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 468 VAMPDELLGEKSCAFIVVKEPPLR----AAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred hcCchhhcCcceeEEEEecCCCCC----HHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhh
Confidence 999999999999999999877532 57888888777 99999999999999999999999999999987754
No 63
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.3e-62 Score=562.08 Aligned_cols=492 Identities=20% Similarity=0.250 Sum_probs=394.0
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+.++. .+|+++++.+..+ +..+.+||.||+++++++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~~~~~l~~~~~-~~~~~~~~~~~~~--~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 11 LISSLIAHAAR-HAGDTEIVSRRVE--GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CHHHHHHHHHh-hCCCceEEEeecc--CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 57888998887 7899888875321 22468999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++.+++++++++++++++... +.+.+....+ ..+..++.+.+.... ..
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~~-----~~ 149 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFL---------PLVDALAPQC----PNVKGWVAMTDAAHL-----PA 149 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhH---------HHHHHHHhhC----CCceEEEEEccCCcc-----cc
Confidence 99999999999999999999999999999876532 2233322222 344444444332110 00
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHH-HHHHHHhCCCCCcEEEEecCcc
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA-TTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~-~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
.....++|+++..............++++++|+|||||||.||||+++|++++.+.. ......+++.++|++++..|++
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 229 (539)
T PRK07008 150 GSTPLLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMF 229 (539)
T ss_pred CCcccccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchH
Confidence 011134455544332222222345678899999999999999999999999654322 2223457888999999999998
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++ ..++.++..|+++++.+.. +++..++++++++++|++.++|+++..|++.... ...++++||.++++|+
T Consensus 230 h~~~~-~~~~~~l~~G~~~~~~~~~---~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~--~~~~~~~l~~~~~~G~ 303 (539)
T PRK07008 230 HVNAW-GLPYSAPLTGAKLVLPGPD---LDGKSLYELIEAERVTFSAGVPTVWLGLLNHMRE--AGLRFSTLRRTVIGGS 303 (539)
T ss_pred HhhhH-HHHHHHHhcCceEEEecCC---cCHHHHHHHHHHcCCEEEEechHHHHHHHhcccc--cCCCcccceEEEEcCC
Confidence 87764 3457789999999987532 4899999999999999999999999999876542 2346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC-----C----CCCCCCcCCCCCCceEEEECCCCcccCCC
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-----W----PQKPGSATFPFFGVQPVIVDEKGVEIEGE 590 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~-----~----~~~~~~iG~p~~g~~~~IvD~~g~~vp~g 590 (759)
+++++++++|.+.++ +++++.||+||++...+...... . .....++|+|++|+.++|+|+++++++.+
T Consensus 304 ~l~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~ 380 (539)
T PRK07008 304 ACPPAMIRTFEDEYG---VEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWD 380 (539)
T ss_pred CCCHHHHHHHHHHhC---CceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCC
Confidence 999999999999887 78999999999986543221110 0 01235789999999999999999988853
Q ss_pred --ceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHh
Q 004348 591 --CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALV 649 (759)
Q Consensus 591 --~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~ 649 (759)
+.|||+++| +.++.||+++++. . +. +|||+|||+++ +|++|+|.|||++|.
T Consensus 381 ~~~~Gei~v~g--~~~~~gy~~~~~~---~-~~--~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 452 (539)
T PRK07008 381 GKAFGDLQVRG--PWVIDRYFRGDAS---P-LV--DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV 452 (539)
T ss_pred CCcceEEEEeC--CccchhhcCChhh---h-hc--CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH
Confidence 579999999 8899999999832 2 22 68999999988 899999999999999
Q ss_pred cCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 650 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 650 ~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
+||.|.+++|+++++...++.++++|+..++...+ .++|+++++++|++|++|+.|+++++||+|++||++|++|++
T Consensus 453 ~~p~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~ 529 (539)
T PRK07008 453 AHPAVAEAACIACAHPKWDERPLLVVVKRPGAEVT---REELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLRE 529 (539)
T ss_pred hCCceeEEEEEecCCchhccceEEEEEeCCCCccC---HHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHH
Confidence 99999999999999887788899999887654433 578999999999999999999999999999999999999999
Q ss_pred HHhc
Q 004348 730 IASR 733 (759)
Q Consensus 730 ~~~~ 733 (759)
.+.+
T Consensus 530 ~~~~ 533 (539)
T PRK07008 530 QFRD 533 (539)
T ss_pred HHHh
Confidence 8875
No 64
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.2e-61 Score=557.66 Aligned_cols=490 Identities=22% Similarity=0.309 Sum_probs=397.7
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++++++|+++++ ++||++|+++.+.+ +..+.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||++
T Consensus 7 ~~l~~~~~~~a~-~~p~~~a~~~~~~~-~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~ 84 (517)
T PRK08008 7 QHLRQMWDDLAD-VYGHKTALIFESSG-GVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAK 84 (517)
T ss_pred ccHHHHHHHHHH-HCCCceEEEcccCC-CccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 368899999998 89999999986432 3357899999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|++|.++.+++.+++++++++++|+++... +.+.+..... ...++.++.......
T Consensus 85 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~~~~~------- 145 (517)
T PRK08008 85 IGAIMVPINARLLREESAWILQNSQASLLVTSAQFY---------PMYRQIQQED---ATPLRHICLTRVALP------- 145 (517)
T ss_pred cCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchh---------HHHHHHHhhc---cccCcEEEEecCCCc-------
Confidence 999999999999999999999999999999987532 2233222221 133444544432210
Q ss_pred cCCCCccchhhhcCCCCC-CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCc
Q 004348 360 WQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l 438 (759)
.......+.+....... ........++++++|+|||||||.||||+++|++++.. .........+.+++++++.+|+
T Consensus 146 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~~~~~~~~p~ 223 (517)
T PRK08008 146 -ADDGVSSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFA-GYYSAWQCALRDDDVYLTVMPA 223 (517)
T ss_pred -ccccccCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHH-HHHHhhhcCCCCCCeEEEecCc
Confidence 00011223333222111 11122345789999999999999999999999996533 2223334567889999999999
Q ss_pred chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 439 ~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
.|..++...++.++..|+++++.+. +++..+++.|+++++|++.++|++++.++...... .....++|.+.++
T Consensus 224 ~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~~~~l~~~~~~- 296 (517)
T PRK08008 224 FHIDCQCTAAMAAFSAGATFVLLEK----YSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA--NDRQHCLREVMFY- 296 (517)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEccc----cCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc--ccccccceeeEEe-
Confidence 9987777788999999999999864 48899999999999999999999999988664321 1234678887775
Q ss_pred CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEe
Q 004348 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
.+++++.+.+|.+.++ +++++.||+||++..++...... .....++|+|+++++++|+|+++++++.|+.|||+|+
T Consensus 297 ~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v~ 372 (517)
T PRK08008 297 LNLSDQEKDAFEERFG---VRLLTSYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICIK 372 (517)
T ss_pred cCCCHHHHHHHHHHhC---CeEEeeccccccccccccCCccc-cccCCccccCCCCcEEEEECCCCCCCCCCCcceEEEe
Confidence 5899999999999887 78999999999987655443322 3455789999999999999999999999999999999
Q ss_pred cC-CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEE
Q 004348 599 SS-WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAA 658 (759)
Q Consensus 599 g~-~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~ 658 (759)
|+ .+++++|||++++.+.+.|. .+|||+|||+|+ +|++|+|.|||++|.+||.|.+++
T Consensus 373 g~~~~~~~~gy~~~~~~~~~~~~--~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~ 450 (517)
T PRK08008 373 GVPGKTIFKEYYLDPKATAKVLE--ADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIV 450 (517)
T ss_pred CCCCcchhhhHhCChHHHhhccc--CCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEE
Confidence 83 25899999999999887764 378999999987 799999999999999999999999
Q ss_pred EEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 659 VVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 659 Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
|++++++..++.+.++|+++++...+ .++|++++++++++|++|..+++++++|+|++||++|+.|+
T Consensus 451 v~g~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 451 VVGIKDSIRDEAIKAFVVLNEGETLS---EEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EEccCCCCCCceEEEEEEECCCCCCC---HHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 99999888888999999998765443 57899999999999999999999999999999999999874
No 65
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.5e-61 Score=556.46 Aligned_cols=485 Identities=23% Similarity=0.289 Sum_probs=398.1
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
++++|+++++ .+|+++|+.+. .+.+||+||.++++++|+.|++.|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G 74 (515)
T TIGR03098 2 LHHLLEDAAA-RLPDATALVHH------DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAG 74 (515)
T ss_pred HHHHHHHHHH-HCCCCeEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 5678888888 89999999976 5789999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC
Q 004348 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (759)
Q Consensus 282 av~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (759)
++++|+++.++.+++..++++++++++|+++... ..+......+ +.+..++.++.... ....
T Consensus 75 ~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~~ 136 (515)
T TIGR03098 75 GVFVPINPLLKAEQVAHILADCNVRLLVTSSERL---------DLLHPALPGC----HDLRTLILVGEPAH-----ASEG 136 (515)
T ss_pred EEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchh---------hhhHhhhhcc----cccceEEEecCccc-----ccCC
Confidence 9999999999999999999999999999976532 1111222221 33444554443221 0001
Q ss_pred CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchh
Q 004348 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (759)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~ 441 (759)
......|++....... .+......+++++|+|||||||.||||+++|++++.+ .......+++.++|++++..|++|+
T Consensus 137 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~-~~~~~~~~~~~~~d~~l~~~p~~~~ 214 (515)
T TIGR03098 137 GGESPSWPKLLALGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAG-AQSVATYLENRPDDRLLAVLPLSFD 214 (515)
T ss_pred ccccccHHHhhccccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHH-HHHHHHHhCCCcccEEEEECchhhH
Confidence 1123345554433221 1223345688999999999999999999999996544 4445566788999999999999999
Q ss_pred chhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCC
Q 004348 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (759)
Q Consensus 442 ~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (759)
.++ ..++.+|..|+++++.+. .+++.+++.++++++|++.++|+++..|.+... ...+++++|.+++||+++
T Consensus 215 ~~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~~~l~~~~~~g~~l 286 (515)
T TIGR03098 215 YGF-NQLTTAFYVGATVVLHDY----LLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW---PESAAPSLRYLTNSGGAM 286 (515)
T ss_pred hHH-HHHHHHHHcCCEEEEcCC----CCHHHHHHHHHHcCCceEecChHHHHHHHhccc---CCCCccceEEEEecCCcC
Confidence 885 568899999999998754 489999999999999999999999999987532 123678999999999999
Q ss_pred CHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCC
Q 004348 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSW 601 (759)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~ 601 (759)
++++++++.+.++ ++.+++.||+||++....... .....+++++|+|++|+.++|+|+++++++.|+.|||+++|
T Consensus 287 ~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g-- 361 (515)
T TIGR03098 287 PRATLSRLRSFLP--NARLFLMYGLTEAFRSTYLPP-EEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRG-- 361 (515)
T ss_pred CHHHHHHHHHHCC--CCeEeeeeccccccceEeccc-ccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcC--
Confidence 9999999999886 478999999999976443221 11234678999999999999999999999999999999999
Q ss_pred CcccccccCChhhHHhhhccc---------CCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCc
Q 004348 602 PGAFRTLYGDHERYETTYFKP---------FPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQ 653 (759)
Q Consensus 602 ~~v~~GY~~~~e~~~~~~~~~---------~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~ 653 (759)
+.++.|||++++.+...|... .++||+|||+|+ +|.+|+|.|||++|.+||.
T Consensus 362 ~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~ 441 (515)
T TIGR03098 362 ALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGL 441 (515)
T ss_pred chhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCC
Confidence 889999999998877665321 134899999987 7999999999999999999
Q ss_pred cceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 654 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 654 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
|.+|+|++++++..++.++++++..++...+ .++|+++++++|+++++|..++++++||+|.+||++|++|++
T Consensus 442 v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 442 VAEAVAFGVPDPTLGQAIVLVVTPPGGEELD---RAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred eeEEEEEeccCcccCceEEEEEEeCCCCCCC---HHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999999999988889999999876554433 578999999999999999999999999999999999999974
No 66
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-61 Score=560.72 Aligned_cols=487 Identities=23% Similarity=0.272 Sum_probs=398.8
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
+.+.+++++. .+|+++|+.+. ++.+||.||.++++++|++|.+.|+++||+|+|+++|+++++++++||+++|
T Consensus 19 ~~~~~~~~a~-~~~~~~a~~~~------~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G 91 (542)
T PRK07786 19 WVNQLARHAL-MQPDAPALRFL------GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLG 91 (542)
T ss_pred HHHHHHHHHH-HCCCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 5566788888 89999999977 6789999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC
Q 004348 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (759)
Q Consensus 282 av~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (759)
++++|+++.++.+++..++++++++++++++... ..+..... ..+.++.++...+...
T Consensus 92 ~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~----~~~~~~~~~~~~~~~~--------- 149 (542)
T PRK07786 92 AIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA---------PVATAVRD----IVPLLSTVVVAGGSSD--------- 149 (542)
T ss_pred eEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH---------HHHHHhhh----ccCccceEEEecCCCc---------
Confidence 9999999999999999999999999999976532 11111111 1134455554432110
Q ss_pred CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCC-CCCcEEEEecCcch
Q 004348 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDY-KPSDVYWCTADCGW 440 (759)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l-~~~d~~l~~~~l~~ 440 (759)
.....+++.+.......+......+++++|+|||||||.||||+++|++++.+ .......+++ ..++++++..|+.|
T Consensus 150 -~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (542)
T PRK07786 150 -DSVLGYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQ-AMTCLRTNGADINSDVGFVGVPLFH 227 (542)
T ss_pred -ccccCHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHH-HHHHHHhcCCCCCCceEEEecchHH
Confidence 01133444433322222223455678999999999999999999999996544 4444455666 56889999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
.+++ ..++.++..|+++++.+.. . +++..+++.|+++++|+++++|+++..|+..... .. ...++|.+++||++
T Consensus 228 ~~g~-~~~~~~l~~G~~~v~~~~~-~-~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~-~~~~lr~i~~gg~~ 301 (542)
T PRK07786 228 IAGI-GSMLPGLLLGAPTVIYPLG-A-FDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQA--RP-RDLALRVLSWGAAP 301 (542)
T ss_pred HHHH-HHHHHHHHccCEEEEccCC-C-cCHHHHHHHHHHcCCeEEEehHHHHHHHHhCccc--Cc-cCcceEEEEECCCC
Confidence 8885 6789999999999997532 2 4899999999999999999999999999876432 11 22379999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecC
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSS 600 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~ 600 (759)
+++++++++.+.++ +.++++.||+||++.+.+...........+++|+|++++.++|+|+++++++.|+.|||+++|
T Consensus 302 ~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g- 378 (542)
T PRK07786 302 ASDTLLRQMAATFP--EAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEIVYRA- 378 (542)
T ss_pred CCHHHHHHHHHHcC--CCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCceEEEEEC-
Confidence 99999999999986 488999999999986544322211123557899999999999999999999999999999999
Q ss_pred CCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEe
Q 004348 601 WPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVG 661 (759)
Q Consensus 601 ~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~ 661 (759)
+.+++||+++++.+...|. +|||+|||+++ +|++|++.|||++|.+||.|.+++|++
T Consensus 379 -~~~~~gy~~~~~~~~~~f~---~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~ 454 (542)
T PRK07786 379 -PTLMSGYWNNPEATAEAFA---GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIG 454 (542)
T ss_pred -hhhhhhhcCCHHHHHHHhh---CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEe
Confidence 8999999999998887763 68999999987 899999999999999999999999999
Q ss_pred EecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 662 VEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 662 ~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
++++..++.++++|++.+.... ...+++++++++++++|++|..|+++++||+|++||++|++|++.+...
T Consensus 455 ~~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 455 RADEKWGEVPVAVAAVRNDDAA--LTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred ccCcccCceEEEEEEECCCCCC--CCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 9887778889999998764321 1257899999999999999999999999999999999999999998754
No 67
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.1e-62 Score=566.92 Aligned_cols=473 Identities=18% Similarity=0.178 Sum_probs=359.3
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
|-+.+.|+++++ ++|+++|+++.+. +..+++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||++
T Consensus 2 ~~~~~~l~~~~~-~~~~~~a~~~~~~--~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~ 76 (525)
T PRK05851 2 NELAAALSDAMT-ASGRDLVVLDRES--GLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWL 76 (525)
T ss_pred chHHHHHHHHhc-CCCCceEEeCCCC--CcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 446778888888 8999999987632 2258999999999999999999988 8999999999999999999999999
Q ss_pred hCCeEEecCCC--------CCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCc
Q 004348 280 IGAVHSVVFAG--------FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (759)
Q Consensus 280 aGav~vpldp~--------~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~ 351 (759)
+|+++++ +|. ...+++.+++++++++++|+++... ..+... . .. +.+.+..
T Consensus 77 ~G~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~---~----~~----~~~~~~~ 135 (525)
T PRK05851 77 AGAAVSI-LPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAV---D----SS----VTVHDLA 135 (525)
T ss_pred cCCCCcC-CCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHh---h----cc----ccccccc
Confidence 9998754 442 2335667789999999999875421 111110 0 00 0000000
Q ss_pred cccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCC-CCc
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK-PSD 430 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~-~~d 430 (759)
..... ....+.....+++++||+|||||||.||||+++|++++ .........+++. ++|
T Consensus 136 ------------------~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~-~~~~~~~~~~~~~~~~d 195 (525)
T PRK05851 136 ------------------TAAHT-NRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVL-SNLRGLNARVGLDAATD 195 (525)
T ss_pred ------------------ccccc-cccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHH-HHHHHHHHHhCCCCCCC
Confidence 00000 00001112467899999999999999999999999954 4455566678888 899
Q ss_pred EEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCC
Q 004348 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKS 510 (759)
Q Consensus 431 ~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~s 510 (759)
++++.+|++|++++ ..++.+|+.|+++++.+......++..+++.++++++|++..+|.++..+.+.... ....++++
T Consensus 196 ~~l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~-~~~~~l~~ 273 (525)
T PRK05851 196 VGCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARR-VSDVDLGA 273 (525)
T ss_pred eEEEcCCCccCccH-HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhcc-ccCCCHHH
Confidence 99999999999996 56889999999999975321222678899999999999886666656555443221 22346789
Q ss_pred eeEEEEeCCCCCHHHHHHHHHH---hCCCCccEeeeeccccccceecccCCCC-------------CCCCCCCcCCCCCC
Q 004348 511 LRVLGSVGEPINPSAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA-------------WPQKPGSATFPFFG 574 (759)
Q Consensus 511 Lr~v~~gGe~l~~~~~~~~~~~---~g~~~~~l~n~YG~TE~~~~~~~~~~~~-------------~~~~~~~iG~p~~g 574 (759)
||.+++||++++++++++|.+. +|.+..+++|.||+||++..++...+.. ...+.+++|+|++|
T Consensus 274 lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g 353 (525)
T PRK05851 274 LRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPG 353 (525)
T ss_pred hheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCC
Confidence 9999999999999999999875 3422346999999999986554332210 01234689999999
Q ss_pred ceEEEECCCC-cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee------------------c
Q 004348 575 VQPVIVDEKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------------S 635 (759)
Q Consensus 575 ~~~~IvD~~g-~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------~ 635 (759)
++++|+|+++ .++|.|+.|||+|+| +++++|||++++.+ .+|||+|||+|+ +
T Consensus 354 ~~v~i~d~~~~~~~~~g~~GEl~v~g--~~~~~GY~~~~~~~-------~~~~~~TGDl~~~~~G~l~~~GR~dd~i~~~ 424 (525)
T PRK05851 354 MEVRISPGDGAAGVAGREIGEIEIRG--ASMMSGYLGQAPID-------PDDWFPTGDLGYLVDGGLVVCGRAKELITVA 424 (525)
T ss_pred cEEEEECCCCCccCCCCCeEEEEEec--CchhhccccCCccC-------CCCceeccceEEEECCEEEEEeecCCEEEEC
Confidence 9999999876 468999999999999 89999999998632 268999999988 8
Q ss_pred cEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCC--ccccEEEEeC-
Q 004348 636 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAF--AAPDKIHWAP- 712 (759)
Q Consensus 636 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~--~vP~~iv~v~- 712 (759)
|+||+|.|||++|.+||+|.+|+|++++++..++.+.++|+....... .++++++++++|+.+ ++|..+++++
T Consensus 425 G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~~~~~v~~~~~~~~----~~~~~~~~~~~l~~~l~~~P~~~~~v~~ 500 (525)
T PRK05851 425 GRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSARPGLVIAAEFRGPD----EAGARSEVVQRVASECGVVPSDVVFVAP 500 (525)
T ss_pred CEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCceeEEEEEEecCcc----hHHHHHHHHHHHHHHhCCCccEEEEECC
Confidence 999999999999999999999999999988777777777765422111 233444455555554 8999999999
Q ss_pred -CCCCCCCCcccHHHHHHHHhc
Q 004348 713 -GLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 713 -~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+||+|++|||+|++|++.+.+
T Consensus 501 ~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 501 GSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred CCcCcCcchHHHHHHHHHHHHh
Confidence 899999999999999988753
No 68
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-62 Score=573.48 Aligned_cols=490 Identities=19% Similarity=0.206 Sum_probs=373.1
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCC---CCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLAC 277 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~---~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~ 277 (759)
++.++|+++++ ++|+++|+++.+.. .+..+.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||
T Consensus 35 ~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA~ 112 (612)
T PRK12476 35 TLISLIERNIA-NVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFAA 112 (612)
T ss_pred cHHHHHHHHHH-hCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHHH
Confidence 47788998888 89999999975311 12346899999999999999999987 999999999999999999999999
Q ss_pred HHhCCeEEec-CCCCC--HHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc
Q 004348 278 ARIGAVHSVV-FAGFS--SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (759)
Q Consensus 278 ~kaGav~vpl-dp~~~--~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (759)
+++|++++|+ ++.++ .+++.+++++++++++|+++... ..+......+. ......++.++...
T Consensus 113 ~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~~--~~~~~~~i~~~~~~--- 178 (612)
T PRK12476 113 IKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAA---------EAVEGFLRNLP--RLRRPRVIAIDAIP--- 178 (612)
T ss_pred HHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHH---------HHHHHHHhhcc--cccCceEEEecccc---
Confidence 9999999999 68877 88999999999999999976532 22222111110 00112333332210
Q ss_pred ccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC-CCCCcEEE
Q 004348 355 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-YKPSDVYW 433 (759)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~-l~~~d~~l 433 (759)
.............++++++|+|||||||+||||+++|++++.+ .......++ +.++++++
T Consensus 179 ------------------~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~~~~~l 239 (612)
T PRK12476 179 ------------------DSAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTN-LVQMILSIDLLDRNTHGV 239 (612)
T ss_pred ------------------ccccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHH-HHHHHHHhccCCCCceEE
Confidence 0000011112346789999999999999999999999995544 333444567 78899999
Q ss_pred EecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHH--HcCCcEEEehHHHHHHHHhcCC--cccccCCCC
Q 004348 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVD--KYKVTIFYTAPTLVRSLMRDGN--EYVTRYSRK 509 (759)
Q Consensus 434 ~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~--~~~vT~l~~~Ps~l~~l~~~~~--~~~~~~~l~ 509 (759)
+.+|++|..++. .++.+++.|+++++........++..+++.++ ++++|++..+|+++..++.... ......+++
T Consensus 240 ~~~Pl~h~~g~~-~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~ 318 (612)
T PRK12476 240 SWLPLYHDMGLS-MIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLS 318 (612)
T ss_pred EeCCcccccchH-HHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchh
Confidence 999999999864 44555566777666643222237899999995 5899999999998887765321 111234688
Q ss_pred CeeEEEEeCCCCCHHHHHHHHHHhC---CCCccEeeeeccccccceecccCCCCC-------------------------
Q 004348 510 SLRVLGSVGEPINPSAWRWFFNVVG---DSRCPISDTWWQTETGGFMITPLPGAW------------------------- 561 (759)
Q Consensus 510 sLr~v~~gGe~l~~~~~~~~~~~~g---~~~~~l~n~YG~TE~~~~~~~~~~~~~------------------------- 561 (759)
+|| +++||++++++++++|.+.++ .+...+++.||+||++..++...+...
T Consensus 319 ~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 397 (612)
T PRK12476 319 NVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPN 397 (612)
T ss_pred Hhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCC
Confidence 999 999999999999999999883 223469999999998765432211100
Q ss_pred CCCCCCcCCCCCCceEEEECCC-CcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc----------------cCC
Q 004348 562 PQKPGSATFPFFGVQPVIVDEK-GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----------------PFP 624 (759)
Q Consensus 562 ~~~~~~iG~p~~g~~~~IvD~~-g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~----------------~~~ 624 (759)
....+++|+|++|++++|+|++ ++++|.|+.|||+|+| |+++.|||++|+.+.+.|.. ..+
T Consensus 398 ~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g--~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~ 475 (612)
T PRK12476 398 AVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHG--DNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDG 475 (612)
T ss_pred cceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcC--CcccccccCChHHHHHHHhhhhccccccccccccccCCC
Confidence 0123578999999999999987 9999999999999999 89999999999999888752 123
Q ss_pred cEEEeCCeee------------------ccEeeCHHHHHHHHhc-CCccce--EEEEeEecCCCCeEEEEEEEEcCCCC-
Q 004348 625 GYYFTGDGCS------------------SGHRIGTAEVESALVS-HPQCAE--AAVVGVEHEVKGQGIYAFVTLVEGVP- 682 (759)
Q Consensus 625 g~y~TGDl~~------------------~G~rI~~~eIE~~L~~-~p~V~e--a~Vv~~~~~~~~~~lva~Vv~~~~~~- 682 (759)
+||+|||+|+ +|+||+|.|||++|.+ ||.|.+ ++|++++++. ++.++++|+++++..
T Consensus 476 ~w~~TGDlg~~~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~ 554 (612)
T PRK12476 476 TWLRTGDLGVYLDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSR 554 (612)
T ss_pred CeeeccccceeECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCccc
Confidence 5999999996 8999999999999985 899999 7778888776 788999999876532
Q ss_pred CcHHHHHHHHHHHHhhcC-CCcc-ccEEEEeC--CCCCCCCCcccHHHHHHHHhc
Q 004348 683 YSEELRKSLVLAVRKQIG-AFAA-PDKIHWAP--GLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 683 ~~~~l~~~l~~~l~~~Lp-~~~v-P~~iv~v~--~lP~T~~GKvdR~~L~~~~~~ 733 (759)
.+ .++|.++++++|. .|++ |..+++++ +||+|++|||+|++|++.+..
T Consensus 555 ~~---~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 555 AD---PAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred cc---HHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 22 3556666666666 3777 68888887 699999999999999998754
No 69
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.7e-62 Score=583.41 Aligned_cols=481 Identities=20% Similarity=0.255 Sum_probs=375.4
Q ss_pred HHHHHHhhcccccCCC-eEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGD-KVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd-~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+++++|+++++ ++|+ ++|+.+. ..+.+||+||.++++++|++|++. +++||+|+|+++|++|+++++|||++
T Consensus 205 t~~~~l~~~~~-~~p~~~~a~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~ 277 (718)
T PRK08043 205 TLYEALLSAQY-RYGAGKPCIEDV-----NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASL 277 (718)
T ss_pred CHHHHHHHHHH-HhCCCCcceEcC-----CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 46788999888 8998 6888642 146899999999999999999987 59999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|+++.++.+++++++++++++++|++++.....+...+ ...+ ..+. ++.+++... ...
T Consensus 278 ~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~-------~~~~----~~~~-~i~~~~~~~----~~~ 341 (718)
T PRK08043 278 RRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHL-------PEQL----TQVR-WVYLEDLKD----DVT 341 (718)
T ss_pred cCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCCh-------hhhh----cccc-EEEhhhhhh----hcc
Confidence 99999999999999999999999999999997654211000000 0001 1111 222221100 000
Q ss_pred cCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
... ....+.+... + ........++|+++|+|||||||.||||+++|++++ .........++++++|++++.+|++
T Consensus 342 ~~~-~~~~~~~~~~--~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~-~~~~~~~~~~~~~~~d~~l~~~Pl~ 416 (718)
T PRK08043 342 TAD-KLWIFAHLLM--P-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLL-ANVEQIKTIADFTPNDRFMSALPLF 416 (718)
T ss_pred hhH-HHHHHHHHhC--C-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHH-HHHHHHHHhhCCCccCeEEEcCcch
Confidence 000 0000000000 0 011123467899999999999999999999999954 4445556678899999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++...++.+|..|+++++.+.. .++..+++.++++++|++..+|+++..+.+.. ...++++||.+++|||
T Consensus 417 h~~g~~~~~~~~l~~G~~vv~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~----~~~~~~~lr~i~~gg~ 489 (718)
T PRK08043 417 HSFGLTVGLFTPLLTGAEVFLYPSP---LHYRIVPELVYDRNCTVLFGTSTFLGNYARFA----NPYDFARLRYVVAGAE 489 (718)
T ss_pred hhhhhHHHHHHHHHcCCEEEEeCCc---ccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc----CcccccceEEEEEeCc
Confidence 9998877889999999999998642 36678899999999999999999998876642 2346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEec
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g 599 (759)
++++++.++|.+.+| +++++.||+||++.+.+...+. ..+.+++|+|++|++++|+|+++. +..|||+|+|
T Consensus 490 ~l~~~~~~~~~~~~g---~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~~~~----~~~Gel~v~g 560 (718)
T PRK08043 490 KLQESTKQLWQDKFG---LRILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSVPGI----EQGGRLQLKG 560 (718)
T ss_pred cCCHHHHHHHHHHcC---CCeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecCCCC----CCceEEEEec
Confidence 999999999999887 7899999999998765543221 245789999999999999998753 4569999999
Q ss_pred CCCcccccccC--ChhhHHhhhc-----ccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCc
Q 004348 600 SWPGAFRTLYG--DHERYETTYF-----KPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQ 653 (759)
Q Consensus 600 ~~~~v~~GY~~--~~e~~~~~~~-----~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~ 653 (759)
++++.|||+ +++.+..... ...+|||+|||+|+ +|+||+|.|||++|.+|+.
T Consensus 561 --~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~ 638 (718)
T PRK08043 561 --PNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSP 638 (718)
T ss_pred --CCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCc
Confidence 899999998 4442211110 01268999999998 8999999999999999999
Q ss_pred cceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh-cCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 654 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 654 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
+.+++|++.+++..++.++++++. ...+ .++|+++++++ |+.|++|..|+++++||+|++|||||++|++++.
T Consensus 639 ~~~~avv~~~~~~~ge~~v~~~~~---~~~~---~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~ 712 (718)
T PRK08043 639 DKQHATAIKSDASKGEALVLFTTD---SELT---REKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVD 712 (718)
T ss_pred cceEEEEEccCCCCCceEEEEEcC---cccC---HHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHh
Confidence 999999999888888888888742 1222 46799999987 9999999999999999999999999999998876
Q ss_pred c
Q 004348 733 R 733 (759)
Q Consensus 733 ~ 733 (759)
.
T Consensus 713 ~ 713 (718)
T PRK08043 713 E 713 (718)
T ss_pred c
Confidence 4
No 70
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.2e-61 Score=557.67 Aligned_cols=486 Identities=22% Similarity=0.311 Sum_probs=393.0
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ ||++|+++. ++.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++
T Consensus 26 ~~~~~~~~~a~---p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~ 96 (536)
T PRK10946 26 PLTDILTRHAA---SDAIAVICG------ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKL 96 (536)
T ss_pred cHHHHHHHhhC---CCCeEEEeC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHc
Confidence 57888988763 999999976 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++++++..+..++..++++++++++++++..... ...... ..+.. ..+.+..+++.+...
T Consensus 97 G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~----~~~~~~-~~l~~---~~~~~~~~~~~~~~~--------- 159 (536)
T PRK10946 97 GVAPVNALFSHQRSELNAYASQIEPALLIADRQHALF----SDDDFL-NTLVA---EHSSLRVVLLLNDDG--------- 159 (536)
T ss_pred CeEEecCCccccHHHHHHHHhhcCCCEEEEecccccc----chHHHH-HHHHh---hCCCceEEEEecCCC---------
Confidence 9988877777788899999999999999987653110 001111 11111 113344333332111
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
...+.+.+.......+.....++++++|+|||||||.||||+++|++++.+ .......+++.++|++++..|++|
T Consensus 160 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~-~~~~~~~~~~~~~~~~l~~~p~~h 234 (536)
T PRK10946 160 ----EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYS-VRRSVEICGFTPQTRYLCALPAAH 234 (536)
T ss_pred ----CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHH-HHHHHHhcCCCCCceEEEecCccc
Confidence 112222332222222233456789999999999999999999999995544 445566788999999999999999
Q ss_pred hchhhH-HHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 441 ITGHSY-VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 441 ~~g~~~-~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
.+++.. .++.+|..|+++++.+. +++..++++++++++|++.++|+++..|++..........+++||.+++||+
T Consensus 235 ~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 235 NYPMSSPGALGVFLAGGTVVLAPD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGA 310 (536)
T ss_pred cccchhhhHHHHhhcCcEEEECCC----CCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCC
Confidence 877543 57889999999998654 4888999999999999999999999999876322222345789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCC-CCceEEEECCCCcccCCCceEEEEEe
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPF-FGVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~-~g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
++++++.++|.+.++ +++++.||+||++..... .........+++|+|+ +++.++|+|+++++++.|+.|||+|+
T Consensus 311 ~l~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~v~ 386 (536)
T PRK10946 311 RLSETLARRIPAELG---CQLQQVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLMTR 386 (536)
T ss_pred CCCHHHHHHHHHhcC---CeEEEeecccccceeeec-CCCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEEEe
Confidence 999999999998887 789999999997643321 1111123457899999 79999999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| +.++.|||++++.+...|.. +|||+|||+|+ +|++|+|.|||++|.+||+|.+++|
T Consensus 387 g--~~~~~GY~~~~~~t~~~~~~--d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 462 (536)
T PRK10946 387 G--PYTFRGYYKSPQHNASAFDA--NGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAAL 462 (536)
T ss_pred c--CccchhhcCCcccchhhccc--CCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEE
Confidence 9 89999999999988776643 68999999997 8999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh-cCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
+++++...++.++++|+++++.. .++|++++++. ||+|++|..+++++++|+|++||++|++|++.+...
T Consensus 463 ~~~~~~~~g~~~~a~vv~~~~~~-----~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 463 VSMEDELMGEKSCAFLVVKEPLK-----AVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred EcCCCcccCceEEEEEEeCCCCC-----HHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhh
Confidence 99998888889999999876522 46788999886 999999999999999999999999999999987654
No 71
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-61 Score=556.38 Aligned_cols=469 Identities=22% Similarity=0.274 Sum_probs=376.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv-~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|.++ .+|+++|+++. +..+||+||.++++++|..|.++|+ ++||+|+++++|++++++++|||++
T Consensus 4 ~~~~~l~~~---~~p~~~Al~~~------~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~ 74 (540)
T PRK13388 4 TIAQLLRDR---AGDDTIAVRYG------DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAAL 74 (540)
T ss_pred hHHHHHHhh---ccCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHh
Confidence 567777764 37999999876 5789999999999999999999999 8999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|++|.++.+++..++++++++++|+++... ..+ ..+. .+..+ ++.++..
T Consensus 75 ~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~---------~~~----~~~~--~~~~~-~i~~~~~--------- 129 (540)
T PRK13388 75 GGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHR---------PLL----DGLD--LPGVR-VLDVDTP--------- 129 (540)
T ss_pred CCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhh---------HHH----Hhhc--ccCce-EEEccch---------
Confidence 999999999999999999999999999999976532 111 1110 01222 3322211
Q ss_pred cCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
.|.+.+.......+.....++++++|+|||||||+||||+++|+++ ..........+++.++|+++..+|+.
T Consensus 130 -------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~-~~~~~~~~~~~~~~~~d~~l~~~p~~ 201 (540)
T PRK13388 130 -------AYAELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRL-AFAGRALTERFGLTRDDVCYVSMPLF 201 (540)
T ss_pred -------hhhhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHH-HHHHHHHHHHhCCCCCCEEEEeeCch
Confidence 1222222111112222356799999999999999999999999995 44455556778999999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++...++.+|..|+++++.+. +++..+++.|+++++|++..+|+.+..++..... ......++|.+ + |+
T Consensus 202 ~~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~~~l~~~-~-G~ 273 (540)
T PRK13388 202 HSNAVMAGWAPAVASGAAVALPAK----FSASGFLDDVRRYGATYFNYVGKPLAYILATPER--PDDADNPLRVA-F-GN 273 (540)
T ss_pred hhcchHHHHHHHHHcCcEEEECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCC--ccccccceEEE-E-CC
Confidence 998876666678999999988643 4889999999999999999999999988876432 11123466643 3 66
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEE-----------EECCCCccc-
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV-----------IVDEKGVEI- 587 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~-----------IvD~~g~~v- 587 (759)
+++++..++|.+.++ ++++|.||+||++.+++.. . ....+++|+|++|++++ ++|++|+++
T Consensus 274 ~~~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~-~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~ 346 (540)
T PRK13388 274 EASPRDIAEFSRRFG---CQVEDGYGSSEGAVIVVRE-P---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLN 346 (540)
T ss_pred CCCHHHHHHHHHHhC---CceecccccccccceeecC-C---CCCCCCCCCCCCCcEEEcCCCCccccceeccCcccccc
Confidence 778888899988886 7899999999998755422 1 13467899999998753 556667766
Q ss_pred CCCceEEEEEe-cCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHH
Q 004348 588 EGECSGYLCIK-SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESA 647 (759)
Q Consensus 588 p~g~~GEL~I~-g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~ 647 (759)
+.+..|||+++ | ++++.||+++++.+.+.|. +|||+|||+|+ +|++|+|.|||++
T Consensus 347 ~~~~~GEl~v~~g--~~~~~gY~~~~~~t~~~~~---~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~ 421 (540)
T PRK13388 347 ADEAIGELVNTAG--AGFFEGYYNNPEATAERMR---HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERI 421 (540)
T ss_pred CCCcceEEEEecC--CcccccccCChHHHHHHhh---cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHH
Confidence 34679999998 9 8999999999999888762 68999999988 7999999999999
Q ss_pred HhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh--cCCCccccEEEEeCCCCCCCCCcccHH
Q 004348 648 LVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ--IGAFAAPDKIHWAPGLPKTRSGKIMRR 725 (759)
Q Consensus 648 L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~--Lp~~~vP~~iv~v~~lP~T~~GKvdR~ 725 (759)
|.+||+|.+|+|++++++..++.+++++++.++...+ .++++++++.+ |++|++|..++++++||+|++||++|+
T Consensus 422 l~~~~~V~~~~v~g~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~ 498 (540)
T PRK13388 422 LLRHPAINRVAVYAVPDERVGDQVMAALVLRDGATFD---PDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKR 498 (540)
T ss_pred HHhCCCceEEEEEEccCCCCCceeEEEEEECCCCcCC---HHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHH
Confidence 9999999999999999887788889999887665443 46788888764 999999999999999999999999999
Q ss_pred HHHHHHhcc
Q 004348 726 ILRKIASRQ 734 (759)
Q Consensus 726 ~L~~~~~~~ 734 (759)
+|+++....
T Consensus 499 ~L~~~~~~~ 507 (540)
T PRK13388 499 ELIAQGWAT 507 (540)
T ss_pred hHHHhccCC
Confidence 999976543
No 72
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.2e-61 Score=555.58 Aligned_cols=476 Identities=19% Similarity=0.231 Sum_probs=391.4
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
+.+.|.+++. .+|+++|+.+. ++++||+||.++++++|+.|++.|+++|++|+|+++++.++++++|||+++|
T Consensus 2 ~~~~l~~~a~-~~p~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G 74 (502)
T TIGR01734 2 LIEAIQAFAE-TYPQTIAYRYQ------GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSG 74 (502)
T ss_pred HHHHHHHHHH-HCCCceEEEcC------CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhC
Confidence 4577888888 89999999876 6789999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC
Q 004348 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (759)
Q Consensus 282 av~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (759)
++++|+++.++.+++.++++.++++.+++++...... .... ++.+....
T Consensus 75 ~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------------------~~~~-~~~~~~~~---------- 123 (502)
T TIGR01734 75 HAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDA--------------------VGTQ-IITLSALE---------- 123 (502)
T ss_pred CEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccc--------------------cCCc-eEEchHhh----------
Confidence 9999999999999999999999999999976542110 0000 11111000
Q ss_pred CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchh
Q 004348 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (759)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~ 441 (759)
................++++++|+|||||||.||||+++|+++. ....+....+++..+++++...|++|.
T Consensus 124 --------~~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~-~~~~~~~~~~~~~~~~~~l~~~p~~~~ 194 (502)
T TIGR01734 124 --------QAETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLV-SFTNWMLADFPLSEGKQFLNQAPFSFD 194 (502)
T ss_pred --------hhhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHH-HHHHHHHHhCCCCCCceEEeecCceec
Confidence 00000000001123457889999999999999999999999954 445555566888999999999999998
Q ss_pred chhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCC
Q 004348 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (759)
Q Consensus 442 ~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (759)
.++ +.++.+|+.|+++++.+.... .++..+++.++++++|.+.++|+++..++.... .....++++|.++++|+++
T Consensus 195 ~~~-~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~--~~~~~~~~l~~~~~~G~~~ 270 (502)
T TIGR01734 195 LSV-MDLYPCLASGGTLHCLDKDIT-NNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPN--FNQENYPHLTHFLFCGEEL 270 (502)
T ss_pred hhH-HHHHHHHHCCCEEEEcCHHHh-cCHHHHHHHHHHcCCeEEEEChhHHHHHHhccc--cccccCCcccEEEEcCCcC
Confidence 874 678899999999999875322 388999999999999999999999988765532 2344678999999999999
Q ss_pred CHHHHHHHHHHhCCCCccEeeeeccccccceeccc-CCCC--CCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEe
Q 004348 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITP-LPGA--WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~-~~~~--~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
++++++++.+.++ ++++++.||+||++...+.. .... ......++|+|++|++++|+|+++++++.|+.|||+|+
T Consensus 271 ~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Gel~v~ 348 (502)
T TIGR01734 271 PVKTAKALLERFP--KATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGEIVIV 348 (502)
T ss_pred CHHHHHHHHHHCC--CcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeEEEEc
Confidence 9999999999986 48999999999997644322 1111 12334679999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhccc-CCcEEEeCCeee------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFKP-FPGYYFTGDGCS------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~~-~~g~y~TGDl~~------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| +.++.||+++++.+...|+.. ..+||+|||+|+ +|++|+|.|||++|.+||.|.+|+|
T Consensus 349 g--~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~v 426 (502)
T TIGR01734 349 G--PSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDGQLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVV 426 (502)
T ss_pred c--ccccccccCCcccchHhheeCCCcEEEECCCEEEEECCEEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEE
Confidence 9 899999999999988887642 345999999988 8999999999999999999999999
Q ss_pred EeEe-cCCCCeEEEEEEEEcCCCCCc-HHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 660 VGVE-HEVKGQGIYAFVTLVEGVPYS-EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 660 v~~~-~~~~~~~lva~Vv~~~~~~~~-~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
+++. +....+.++++|++.+..... .++.++|+++++++||+|++|+.++++++||+|++||++|++|++++.
T Consensus 427 v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 427 VPKYNKDHKVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred EEEEcCCCCceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 9876 445668899999987643322 334588999999999999999999999999999999999999999865
No 73
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-61 Score=552.20 Aligned_cols=481 Identities=23% Similarity=0.278 Sum_probs=396.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|.++++ ++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|++++++++++++++|||+++
T Consensus 13 ~~~~~~~~~~~-~~~~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~ 85 (524)
T PRK06188 13 TYGHLLVSALK-RYPDRPALVLG------DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLA 85 (524)
T ss_pred cHHHHHHHHHH-HCCCCeEEEEC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 57788999998 89999999986 578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++..++++++++++++++... ...+.+..... +.+.+++.+.....
T Consensus 86 G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~~-------- 145 (524)
T PRK06188 86 GLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPF--------VERALALLARV----PSLKHVLTLGPVPD-------- 145 (524)
T ss_pred CCEEEecccCCCHHHHHHHHHhcCceEEEEecchh--------hHHHHHHhhhc----CCceEEEEeCCccc--------
Confidence 99999999999999999999999999999976521 11111111111 23344443332110
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcch
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGW 440 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~ 440 (759)
..+..+...............++++++|+|||||||.||||+++|.+++ .........+++..+|++++..|++|
T Consensus 146 ----~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~-~~~~~~~~~~~~~~~~~~l~~~pl~~ 220 (524)
T PRK06188 146 ----GVDLLAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIA-TMAQIQLAEWEWPADPRFLMCTPLSH 220 (524)
T ss_pred ----hhhHHHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHH-HHHHHHHhhcCCCcCcEEEEecCchh
Confidence 0000001111111111112345679999999999999999999999954 44555666788999999999999999
Q ss_pred hchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCC
Q 004348 441 ITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 441 ~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~ 520 (759)
..++ .++.+++.|+++++.+. .++..+++.++++++|++.++|+++..|++.... ...+++++|.+++||++
T Consensus 221 ~~g~--~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~~~l~~lr~~~~gg~~ 292 (524)
T PRK06188 221 AGGA--FFLPTLLRGGTVIVLAK----FDPAEVLRAIEEQRITATFLVPTMIYALLDHPDL--RTRDLSSLETVYYGASP 292 (524)
T ss_pred hhhH--HHHHHHHcCCEEEEcCC----CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCc--cCCCCcceeEEEEcCCC
Confidence 8774 46788999999999864 3899999999999999999999999999887542 23478899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC----CCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEE
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA----WPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLC 596 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~ 596 (759)
++++.++.+.+.++ ..+++.||+||++..+....... ......++|+|++|+.++|+|+++++++.|+.|||+
T Consensus 293 ~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel~ 369 (524)
T PRK06188 293 MSPVRLAEAIERFG---PIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEIC 369 (524)
T ss_pred CCHHHHHHHHHHhC---chhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEEE
Confidence 99999999988887 67999999999976544322111 123567899999999999999999999999999999
Q ss_pred EecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceE
Q 004348 597 IKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEA 657 (759)
Q Consensus 597 I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea 657 (759)
|+| +.++.||+++++.+...+ .+|||+|||+++ +|++|+|.|||++|.+|++|.++
T Consensus 370 v~~--~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~ 444 (524)
T PRK06188 370 VRG--PLVMDGYWNRPEETAEAF---RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQV 444 (524)
T ss_pred EEC--cchhhhhcCChHHhhhhh---cCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEE
Confidence 999 899999999998887776 368999999987 89999999999999999999999
Q ss_pred EEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 658 AVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 658 ~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
+|++.+++..++.+++++++++..... .++|+++++++++.|++|..|+++++||+|++||++|++|++.+.
T Consensus 445 ~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~ 516 (524)
T PRK06188 445 AVIGVPDEKWGEAVTAVVVLRPGAAVD---AAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYW 516 (524)
T ss_pred EEEeccCCCcCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHH
Confidence 999998887889999999987654433 578999999999999999999999999999999999999999874
No 74
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.1e-61 Score=559.63 Aligned_cols=491 Identities=21% Similarity=0.327 Sum_probs=388.1
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|+++++ ++|+++|+++. ++.+||.||.++++++|++|.+. |+++||+|+++++|++++++++|||++
T Consensus 25 ~~~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~ 97 (562)
T PRK12492 25 SVVEVFERSCK-KFADRPAFSNL------GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALR 97 (562)
T ss_pred cHHHHHHHHHH-hCCCCeeEecC------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57789999998 89999999865 57899999999999999999985 999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEec--cC-ccc---
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYE--NQ-SAM--- 353 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~--~~-~~~--- 353 (759)
+|++++|++|.++.+++.+++++++++++|+++.... ........ .....++... +. ...
T Consensus 98 ~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 163 (562)
T PRK12492 98 AGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGK---------LVQEVLPD-----TGIEYLIEAKMGDLLPAAKGW 163 (562)
T ss_pred cCeEEeccCccCCHHHHHHHHhccCceEEEeccccch---------HHHHhhhc-----cCceEEEeechhhccccccch
Confidence 9999999999999999999999999999998765321 11111110 0111111100 00 000
Q ss_pred ---------cccccccCCCCccchhhhcCCCC-CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH
Q 004348 354 ---------TRENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (759)
Q Consensus 354 ---------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (759)
..............|++...... ..........+++++|+|||||||.||||+++|++++.+.. .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~-~~~~~ 242 (562)
T PRK12492 164 LVNTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANML-QVRAC 242 (562)
T ss_pred hcccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHH-HHHHH
Confidence 00000000011233444332211 11112245678999999999999999999999999644433 22222
Q ss_pred hC---------CCC-CcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHH
Q 004348 424 FD---------YKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVR 493 (759)
Q Consensus 424 ~~---------l~~-~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~ 493 (759)
++ +.. +++++...|+.|..++.+.++..+..|+++++.... .++..+++.|+++++|++..+|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~ 319 (562)
T PRK12492 243 LSQLGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNP---RDIPGFIKELGKWRFSALLGLNTLFV 319 (562)
T ss_pred HhcccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCC---cCHHHHHHHHHHhCCceeeCcHHHHH
Confidence 22 233 356788899999998777777788899988776432 37899999999999999999999999
Q ss_pred HHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCC
Q 004348 494 SLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF 573 (759)
Q Consensus 494 ~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~ 573 (759)
.|++... ....+++++|.+++||+++++++.++|.+.++ +++++.||+||++.+++...... ....+++|+|++
T Consensus 320 ~l~~~~~--~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~p~~ 393 (562)
T PRK12492 320 ALMDHPG--FKDLDFSALKLTNSGGTALVKATAERWEQLTG---CTIVEGYGLTETSPVASTNPYGE-LARLGTVGIPVP 393 (562)
T ss_pred HHHhCcC--cccccccceeEEEeccccCCHHHHHHHHHHhC---CceeeccCccccCceeeecCCcc-cccCCccceecC
Confidence 9987653 23456789999999999999999999998876 78999999999987655332221 234578999999
Q ss_pred CceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------
Q 004348 574 GVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------------- 634 (759)
Q Consensus 574 g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------- 634 (759)
++.++|+|+++++++.|+.|||+|+| +.+++|||++++.+.+.|. .+|||+|||+|+
T Consensus 394 ~~~v~ivd~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~--~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~ 469 (562)
T PRK12492 394 GTALKVIDDDGNELPLGERGELCIKG--PQVMKGYWQQPEATAEALD--AEGWFKTGDIAVIDPDGFVRIVDRKKDLIIV 469 (562)
T ss_pred CCEEEEECCCCCCCCCCCceEEEEeC--CccccccccCchhhhhccc--CCCceecCcEEEECCCCeEEEecccCCeEEE
Confidence 99999999999999999999999999 8999999999999887653 368999999988
Q ss_pred ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCC
Q 004348 635 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 714 (759)
Q Consensus 635 ~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~l 714 (759)
+|++|+|.|||++|.+||.|.+++|++.++...++.++++++..+... + .++|+++++++|+.|++|..++++++|
T Consensus 470 ~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~---~~~i~~~~~~~l~~~~~P~~i~~~~~~ 545 (562)
T PRK12492 470 SGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEAVKLFVVARDPGL-S---VEELKAYCKENFTGYKVPKHIVLRDSL 545 (562)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC-C---HHHHHHHHHHhcccccCCcEEEEeccC
Confidence 799999999999999999999999999998878889999998765432 2 578999999999999999999999999
Q ss_pred CCCCCCcccHHHHHHH
Q 004348 715 PKTRSGKIMRRILRKI 730 (759)
Q Consensus 715 P~T~~GKvdR~~L~~~ 730 (759)
|+|++||++|++|+++
T Consensus 546 P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 546 PMTPVGKILRRELRDI 561 (562)
T ss_pred CCCCCCceeHHHHHhh
Confidence 9999999999999975
No 75
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-61 Score=548.75 Aligned_cols=462 Identities=21% Similarity=0.322 Sum_probs=380.0
Q ss_pred hhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEe
Q 004348 207 DRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSV 286 (759)
Q Consensus 207 ~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vp 286 (759)
+.+++ .+||++|+.+.. .++.+||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|++++|
T Consensus 2 ~~~a~-~~p~~~a~~~~~----~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 76 (488)
T PRK09088 2 AFHAR-LQPQRLAAVDLA----LGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVP 76 (488)
T ss_pred chhhh-hCCCceEEEecC----CCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEe
Confidence 34556 799999998631 1578999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCcc
Q 004348 287 VFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDI 366 (759)
Q Consensus 287 ldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~ 366 (759)
+++.++.+++.+++++++++++|+++....... ..+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------------------~~~~~~~----------------- 116 (488)
T PRK09088 77 LNWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------------------DVEDLAA----------------- 116 (488)
T ss_pred eCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------------------cccchhh-----------------
Confidence 999999999999999999999998765321000 0000000
Q ss_pred chhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhH
Q 004348 367 WWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSY 446 (759)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~ 446 (759)
+.+...... ........++++++++|||||||.||+|+++|++++ .....+...+.+.++|++++..|+.|..++..
T Consensus 117 -~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~-~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 193 (488)
T PRK09088 117 -FIASADALE-PADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQ-QTAHNFGVLGRVDAHSSFLCDAPMFHIIGLIT 193 (488)
T ss_pred -hhhhccccc-cccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHH-HHHHHHHHhhCCCCCcEEEEecchHHHHHHHH
Confidence 000000000 001112356789999999999999999999999954 44445555667888999999999999999877
Q ss_pred HHHHHhhcCcEEEEecCCCCCCChhHHHHHHH--HcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHH
Q 004348 447 VTYGPMLNGASVVVFEGAPTYPDSGRSWDIVD--KYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPS 524 (759)
Q Consensus 447 ~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~--~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~ 524 (759)
.++.++..|+++++.++ +++..++..+. ++++|+++.+|++++.|.+... ....++++||.+++||++++.+
T Consensus 194 ~~~~~l~~g~~~~~~~~----~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l~~~~~gG~~~~~~ 267 (488)
T PRK09088 194 SVRPVLAVGGSILVSNG----FEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPG--FDAAALRHLTALFTGGAPHAAE 267 (488)
T ss_pred HHHHHHhcCCEEEEcCC----CCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcC--cCccccccceEEEecCCCCCHH
Confidence 78889999999998754 37788888886 4899999999999999887642 1234578999999999999999
Q ss_pred HHHHHHHHhCCCCccEeeeeccccccceecccCC-CCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCc
Q 004348 525 AWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-GAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPG 603 (759)
Q Consensus 525 ~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~ 603 (759)
.++++.+. + +++++.||+||++........ .....+++++|+|+++++++|+|+++++++.|+.|||+|+| |+
T Consensus 268 ~~~~~~~~-g---~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~ 341 (488)
T PRK09088 268 DILGWLDD-G---IPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGELLLRG--PN 341 (488)
T ss_pred HHHHHHHh-C---CceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCceEEEEEC--Cc
Confidence 88887764 4 789999999999865432211 11123567899999999999999999999999999999999 89
Q ss_pred ccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEec
Q 004348 604 AFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEH 664 (759)
Q Consensus 604 v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~ 664 (759)
++.||+++++.+.+.+. .+|||+|||+|+ +|++|+|.|||++|.+||.|.+++|+++++
T Consensus 342 ~~~gY~~~~~~~~~~~~--~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~ 419 (488)
T PRK09088 342 LSPGYWRRPQATARAFT--GDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMAD 419 (488)
T ss_pred cchhhcCChhhhhhhhc--CCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCC
Confidence 99999999998877664 378999999998 799999999999999999999999999988
Q ss_pred CCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 665 EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 665 ~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+..++..+++|+++++...+ .++|++++++++++|++|..|+++++||+|++||++|++|++++..
T Consensus 420 ~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~ 485 (488)
T PRK09088 420 AQWGEVGYLAIVPADGAPLD---LERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAA 485 (488)
T ss_pred ccCCceeEEEEEECCCCCCC---HHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHh
Confidence 77778889999987654433 5789999999999999999999999999999999999999998764
No 76
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=8.3e-61 Score=557.37 Aligned_cols=493 Identities=21% Similarity=0.297 Sum_probs=378.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+||++|+++. +.++||+||+++++++|++|.++|+++||+|+|+++|++++++++|||+++
T Consensus 15 ~~~~~l~~~~~-~~p~~~Al~~~------~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~ 87 (579)
T PLN03102 15 TPITFLKRASE-CYPNRTSIIYG------KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMA 87 (579)
T ss_pred cHHHHHHHHHH-hCCCCeEEEEC------CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 46778899888 89999999986 578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhh--cCCCccEEEEeccCcccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK--SGISVDVCLTYENQSAMTRENT 358 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~~ 358 (759)
|++++|++|.++.+++.++|+.+++++||++++.. ..+.+....+.. ....+ .++.++.... .
T Consensus 88 G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~ 152 (579)
T PLN03102 88 GAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE---------PLAREVLHLLSSEDSNLNL-PVIFIHEIDF-----P 152 (579)
T ss_pred CcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH---------HHHHHHHhhccccccccCc-eEEEeccccc-----c
Confidence 99999999999999999999999999999976532 222222221100 00112 2333332110 0
Q ss_pred ccCCCCccchhhhcCCCCCCC-----CccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEE
Q 004348 359 KWQDGRDIWWQDVVPKYPTKC-----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYW 433 (759)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l 433 (759)
.........|.+......... ......++++++|+|||||||.||||+++|++++.... .....+.+...++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~-~~~~~~~~~~~~~~l 231 (579)
T PLN03102 153 KRPSSEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTL-SAIIGWEMGTCPVYL 231 (579)
T ss_pred cCCcccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHH-HHHhhcCCCCCCeEE
Confidence 000001223444332221110 01123568999999999999999999999999544332 233345667778999
Q ss_pred EecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeE
Q 004348 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRV 513 (759)
Q Consensus 434 ~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~ 513 (759)
...|+.|..++ ...+.++..|+++++... +++..+++.|+++++|++.++|+++..|++.... .....++++.
T Consensus 232 ~~~pl~h~~g~-~~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~~~~ 304 (579)
T PLN03102 232 WTLPMFHCNGW-TFTWGTAARGGTSVCMRH----VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSL--DLSPRSGPVH 304 (579)
T ss_pred ecCChhhhcch-hHHHHHHHhcCcEEeecc----CChHHHHHHHHHcCCeEEEeChHHHHHHHhCccc--ccCCcccceE
Confidence 99999998885 456778899999988754 3788899999999999999999999999876431 2234567889
Q ss_pred EEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCC-C-------C----CCCCCCCcCCCCCCceEEEEC
Q 004348 514 LGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP-G-------A----WPQKPGSATFPFFGVQPVIVD 581 (759)
Q Consensus 514 v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~-~-------~----~~~~~~~iG~p~~g~~~~IvD 581 (759)
+++||+++++.+.+++.+ +| +++++.||+||+++..+.... . . .....+..+.|+++ +.|+|
T Consensus 305 ~~~gg~~~~~~~~~~~~~-~g---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--v~i~~ 378 (579)
T PLN03102 305 VLTGGSPPPAALVKKVQR-LG---FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLAD--VDVKN 378 (579)
T ss_pred EEECCCCCCHHHHHHHHH-cC---CeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccc--eEEec
Confidence 999999999999998865 55 789999999999864432110 0 0 00112333444444 45666
Q ss_pred C-CCcccCC--CceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEee
Q 004348 582 E-KGVEIEG--ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRI 639 (759)
Q Consensus 582 ~-~g~~vp~--g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI 639 (759)
+ .+++++. ++.|||+|+| |++++|||++++.+.+.|. +|||+|||+|+ +|++|
T Consensus 379 ~~~~~~v~~~~~~~GEl~v~g--~~~~~GY~~~~~~t~~~f~---~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v 453 (579)
T PLN03102 379 KETQESVPRDGKTMGEIVIKG--SSIMKGYLKNPKATSEAFK---HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENI 453 (579)
T ss_pred cccccccCCCCCCceEEEEEC--cchhhhhcCChhhhHhhhc---cCceecCceEEEcCCCeEEEEeccCcEEEECCEEE
Confidence 4 5677764 4689999999 8999999999999887762 68999999988 89999
Q ss_pred CHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcH-------HHHHHHHHHHHhhcCCCccccEEEEeC
Q 004348 640 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSE-------ELRKSLVLAVRKQIGAFAAPDKIHWAP 712 (759)
Q Consensus 640 ~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~-------~l~~~l~~~l~~~Lp~~~vP~~iv~v~ 712 (759)
+|.|||++|.+||.|.+++|++++++..++.++|+|++.++....+ ....+|+++++++||.|++|..|++++
T Consensus 454 ~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~ 533 (579)
T PLN03102 454 SSVEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQ 533 (579)
T ss_pred CHHHHHHHHHhCCCcceeEEEeccCccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcc
Confidence 9999999999999999999999999888899999999876543211 014679999999999999999999999
Q ss_pred CCCCCCCCcccHHHHHHHHhcc
Q 004348 713 GLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 713 ~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
+||+|++||++|++|++++...
T Consensus 534 ~~P~t~~gKi~r~~L~~~~~~~ 555 (579)
T PLN03102 534 ELPKNGNGKILKPKLRDIAKGL 555 (579)
T ss_pred cCCCCCcccccHHHHHHHHHHh
Confidence 9999999999999999987654
No 77
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-61 Score=566.63 Aligned_cols=503 Identities=17% Similarity=0.168 Sum_probs=377.8
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH---cCCCCC-----------CEEEEEcCC
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD---IGVKKG-----------DAVIIYLPM 266 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~---~Gv~~g-----------d~Vai~~~~ 266 (759)
++.++|.++++ ++|+++|+++... +...+.+||+||.++++++|++|.+ +|+++| |+|+|+++|
T Consensus 62 ~l~~~l~~~~~-~~p~~~Al~~~~~-g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 62 HIMKLLLEKYK-LNNNKIAIVEHSC-GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred hHHHHHHHHHh-hcCCceeEeccCC-CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 78899999998 8999999986421 1124789999999999999999997 499999 999999999
Q ss_pred ChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEE
Q 004348 267 LMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLT 346 (759)
Q Consensus 267 s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~ 346 (759)
++||++++|||+++|++.||+++.++.+++.++|+++++++||++... .+.+.+....+ +.++.+++
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~---------~~~l~~~~~~~----~~l~~ii~ 206 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDL---------VEGLLERKNEL----PHLKKLII 206 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHH---------HHHHHHhhccC----CCceEEEE
Confidence 999999999999999999999999999999999999999999985432 12222222222 56777887
Q ss_pred eccCcccc-----------------cccc-----------------------ccC-----------------CCCccchh
Q 004348 347 YENQSAMT-----------------RENT-----------------------KWQ-----------------DGRDIWWQ 369 (759)
Q Consensus 347 ~~~~~~~~-----------------~~~~-----------------------~~~-----------------~~~~~~~~ 369 (759)
++...... .... .+. ......|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 286 (746)
T PTZ00342 207 LDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFD 286 (746)
T ss_pred ECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHH
Confidence 76421100 0000 000 00001122
Q ss_pred hhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH-hCCCCCcEEEEecCcchhchhhHHH
Q 004348 370 DVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA-FDYKPSDVYWCTADCGWITGHSYVT 448 (759)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~-~~l~~~d~~l~~~~l~~~~g~~~~~ 448 (759)
+.........+.....++|+|+|+|||||||.||||++||+|++.+........ ....+.|++++++|++|+++.. ..
T Consensus 287 ~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~-~~ 365 (746)
T PTZ00342 287 DMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERV-IA 365 (746)
T ss_pred HHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHH-HH
Confidence 221111111122345689999999999999999999999999655433222111 1223568999999999999875 45
Q ss_pred HHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCC------ccccc-----------------
Q 004348 449 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN------EYVTR----------------- 505 (759)
Q Consensus 449 ~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~------~~~~~----------------- 505 (759)
+.+++.|+++++.++ ++..+++.|+++++|++.++|.++..|..... ...++
T Consensus 366 ~~~l~~G~~i~~~~~-----~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 440 (746)
T PTZ00342 366 YLSFMLGGTINIWSK-----DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGG 440 (746)
T ss_pred HHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCC
Confidence 678999999998753 78899999999999999999999998865200 00000
Q ss_pred -----------------CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCc
Q 004348 506 -----------------YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSA 568 (759)
Q Consensus 506 -----------------~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~i 568 (759)
.-.++||.+++||+++++++.++|...+| +++++.||+||+++..+...+. ....+++
T Consensus 441 ~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g---~~i~~gYGlTEt~~~~~~~~~~--~~~~gsv 515 (746)
T PTZ00342 441 FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN---VNYYQGYGLTETTGPIFVQHAD--DNNTESI 515 (746)
T ss_pred cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC---CCEEEeeccCcccceeeeccCC--CCCcccc
Confidence 01268999999999999999999999887 7899999999998765543332 2467899
Q ss_pred CCCC-CCceEEEEC-CCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee------------
Q 004348 569 TFPF-FGVQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------ 634 (759)
Q Consensus 569 G~p~-~g~~~~IvD-~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------ 634 (759)
|+|+ ++++++|+| ++....+.+..|||+|+| |+++.|||++|+.|.+.|.. +|||+|||+|+
T Consensus 516 G~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrG--p~v~~GY~~~pe~T~~~f~~--dGW~~TGDig~~d~dG~l~i~gR 591 (746)
T PTZ00342 516 GGPISPNTKYKVRTWETYKATDTLPKGELLIKS--DSIFSGYFLEKEQTKNAFTE--DGYFKTGDIVQINKNGSLTFLDR 591 (746)
T ss_pred cCcCCCcEEEEEecccccccCCCCCceEEEEec--CcccccccCChhhhhhhcCc--CCcccCCcEEEECCCCeEEEEcc
Confidence 9998 999999998 444444444579999999 89999999999999998853 79999999998
Q ss_pred --------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCC----------------CC---CcH--
Q 004348 635 --------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEG----------------VP---YSE-- 685 (759)
Q Consensus 635 --------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~----------------~~---~~~-- 685 (759)
+|++|+|.|||++|.+||.|.+|+|++.. ....++|+|++... .. ..+
T Consensus 592 ~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~---~~~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~ 668 (746)
T PTZ00342 592 SKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDD---SMDGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKL 668 (746)
T ss_pred CCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccC---CccccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHh
Confidence 69999999999999999999999999852 23468999987641 10 000
Q ss_pred --------HHHHHHHHHH-----HhhcCCCccccEEEEeCC-C----CCCCCCcccHHHHHHHHhcccC
Q 004348 686 --------ELRKSLVLAV-----RKQIGAFAAPDKIHWAPG-L----PKTRSGKIMRRILRKIASRQLD 736 (759)
Q Consensus 686 --------~l~~~l~~~l-----~~~Lp~~~vP~~iv~v~~-l----P~T~~GKvdR~~L~~~~~~~~~ 736 (759)
++.+.+++.+ +..|+.|.++++|.++++ + -+||+.|+.|+.+.+.|+..++
T Consensus 669 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~ 737 (746)
T PTZ00342 669 TDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFID 737 (746)
T ss_pred hhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHH
Confidence 1122233222 235999999999998863 3 2899999999999999885544
No 78
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.9e-61 Score=556.56 Aligned_cols=496 Identities=24% Similarity=0.329 Sum_probs=391.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
+++++|++++. .+|+++|+++. ++.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++
T Consensus 25 ~~~~~~~~~a~-~~p~~~a~~~~------~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (563)
T PRK06710 25 PLHKYVEQMAS-RYPEKKALHFL------GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLA 97 (563)
T ss_pred cHHHHHHHHHH-HCCCceEEEec------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 57899999888 89999999986 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccc--cccc-
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM--TREN- 357 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~--~~~~- 357 (759)
|++++|++|.++.+++.++++.++++++++++...... ...... .....+++....... +...
T Consensus 98 G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 163 (563)
T PRK06710 98 GGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRV---------TNVQSA-----TKIEHVIVTRIADFLPFPKNLL 163 (563)
T ss_pred CeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhh---------hccchh-----hccceeEEeccccccccccccc
Confidence 99999999999999999999999999999987542110 000000 011122211100000 0000
Q ss_pred ------------cccC-CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHh
Q 004348 358 ------------TKWQ-DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAF 424 (759)
Q Consensus 358 ------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~ 424 (759)
.... ......|.................++++++|+|||||||.||||+++|++++.+........+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 243 (563)
T PRK06710 164 YPFVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLY 243 (563)
T ss_pred cchhhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhcc
Confidence 0000 000001221111111111111123578999999999999999999999996544333333334
Q ss_pred CCCC-CcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccc
Q 004348 425 DYKP-SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 503 (759)
Q Consensus 425 ~l~~-~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~ 503 (759)
+... ++++++..|+.|..++...++.+++.|+++++.+. +++..+++.|+++++|++.++|+++..|++... .
T Consensus 244 ~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~ 317 (563)
T PRK06710 244 NCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK----FDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPL--L 317 (563)
T ss_pred CCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC----CCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCc--c
Confidence 5444 45888999999988876667788999999999753 488999999999999999999999999987543 2
Q ss_pred ccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC-C
Q 004348 504 TRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-E 582 (759)
Q Consensus 504 ~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD-~ 582 (759)
...+++++|.+++||+++++++++++.+.++ +++++.||+||++......... ....++++|+|++++.++|+| +
T Consensus 318 ~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~ 393 (563)
T PRK06710 318 KEYDISSIRACISGSAPLPVEVQEKFETVTG---GKLVEGYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLE 393 (563)
T ss_pred ccCChhhhhheeeCCCcCCHHHHHHHHHhhC---CCEecccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECC
Confidence 2346689999999999999999999998886 7899999999998754432211 123457899999999999998 5
Q ss_pred CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHH
Q 004348 583 KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAE 643 (759)
Q Consensus 583 ~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~e 643 (759)
++++++.|..|||+|+| +.+++||+++++.+...+ .+|||+|||+++ +|+||+|.|
T Consensus 394 ~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~e 468 (563)
T PRK06710 394 TGEALPPGEIGEIVVKG--PQIMKGYWNKPEETAAVL---QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPRE 468 (563)
T ss_pred CCccCCCCCceEEEEec--CccchhhhCChHHHhhhc---ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHH
Confidence 78999999999999999 899999999999887655 278999999987 899999999
Q ss_pred HHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCccc
Q 004348 644 VESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 723 (759)
Q Consensus 644 IE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvd 723 (759)
||++|.+||.|.+++|++++++..++.++++|+.+++...+ .++++++++++|+.|++|..|+++++||+|++||++
T Consensus 469 iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~ 545 (563)
T PRK06710 469 VEEVLYEHEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECS---EEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKIL 545 (563)
T ss_pred HHHHHHhCcceeeEEEEccccCCcCceeEEEEEECCCCCCC---HHHHHHHHHHhcccccCCcEEEEcccCCCCccchhh
Confidence 99999999999999999999888889999999988765443 578999999999999999999999999999999999
Q ss_pred HHHHHHHHhccc
Q 004348 724 RRILRKIASRQL 735 (759)
Q Consensus 724 R~~L~~~~~~~~ 735 (759)
|++|+++...+.
T Consensus 546 r~~L~~~~~~~~ 557 (563)
T PRK06710 546 RRVLIEEEKRKN 557 (563)
T ss_pred HHHHHHHHhhcC
Confidence 999999887653
No 79
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-60 Score=551.06 Aligned_cols=493 Identities=22% Similarity=0.294 Sum_probs=393.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ ++||+++++...+ +..+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~~~~~~~~~a~-~~~~~~~~~~~~~--~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~ 87 (542)
T PRK06018 11 LCHRIIDHAAR-IHGNREVVTRSVE--GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGI 87 (542)
T ss_pred CHHHHHHHHHH-hCCCceEEEeecc--CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhc
Confidence 57899999998 8999999985321 23578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++..+++++++++++++..+. +.+.+..... +.+..+++..+..... ...
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~- 151 (542)
T PRK06018 88 GAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV---------PILEKIADKL----PSVERYVVLTDAAHMP--QTT- 151 (542)
T ss_pred CeEeeccccccCHHHHHHHHhccCCCEEEEccccH---------HHHHHHHhhC----CCccEEEEeccccccc--ccC-
Confidence 99999999999999999999999999999976542 2233332222 3445555443221100 000
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHH-HHHHHHHHhCCCCCcEEEEecCcc
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH-TATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~-~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
......|.+.+.............++++++|+|||||||.||||+++|++.+.. ........++++.+|+++...|++
T Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~ 230 (542)
T PRK06018 152 -LKNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLF 230 (542)
T ss_pred -ccccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHH
Confidence 001223444443322222223456788999999999999999999999974322 233344567889999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++. ..+.++..|+++++... .+++..+++.++++++|++.++|++++.|.+.... ...++++||.+++|||
T Consensus 231 h~~~~~-~~~~~~~~g~~~v~~~~---~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~~~~lr~~~~~G~ 304 (542)
T PRK06018 231 HANSWG-IAFSAPSMGTKLVMPGA---KLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEK--EGLKLPHLKMVVCGGS 304 (542)
T ss_pred HHhhhH-HHHhhhhcCceEEccCc---CCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccc--cCCCcccceEEEEcCC
Confidence 988753 45678899999988542 24889999999999999999999999999876432 2346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccC-CCCC--------CCCCCCcCCCCCCceEEEECCCCcccCCC
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PGAW--------PQKPGSATFPFFGVQPVIVDEKGVEIEGE 590 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~-~~~~--------~~~~~~iG~p~~g~~~~IvD~~g~~vp~g 590 (759)
+++++++++|.+ ++ +++++.||+||++.+.+... .... .....++|+|++|++++|+|++++++|.+
T Consensus 305 ~l~~~~~~~~~~-~~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~ 380 (542)
T PRK06018 305 AMPRSMIKAFED-MG---VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWD 380 (542)
T ss_pred CCCHHHHHHHHH-hC---CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCC
Confidence 999999999999 76 78999999999987544321 1100 01235789999999999999999988753
Q ss_pred --ceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHh
Q 004348 591 --CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALV 649 (759)
Q Consensus 591 --~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~ 649 (759)
..|||+|+| ++++.|||++... . .+.+|||+|||+++ +|++|++.|||++|.
T Consensus 381 ~~~~Gel~i~g--~~~~~gy~~~~~~----~-~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~ 453 (542)
T PRK06018 381 GKTFGRLKVRG--PAVAAAYYRVDGE----I-LDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV 453 (542)
T ss_pred CCceeEEEEec--CCcchhhhcCccc----E-ecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH
Confidence 689999999 8999999984321 1 22478999999987 899999999999999
Q ss_pred cCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 650 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 650 ~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
+||+|.+|+|++.+++..++.+.++|++.++...+ .++++++++++++.|++|..|+++++||+|++||++|++|++
T Consensus 454 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~ 530 (542)
T PRK06018 454 GHPKVAEAAVIGVYHPKWDERPLLIVQLKPGETAT---REEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALRE 530 (542)
T ss_pred hCCcceeEEEEeccCCCcCceeEEEEEeCCCCCCC---HHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHH
Confidence 99999999999999887788999999988765544 568999999999999999999999999999999999999999
Q ss_pred HHhc
Q 004348 730 IASR 733 (759)
Q Consensus 730 ~~~~ 733 (759)
.+.+
T Consensus 531 ~~~~ 534 (542)
T PRK06018 531 QFKD 534 (542)
T ss_pred HHhc
Confidence 8865
No 80
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-60 Score=552.46 Aligned_cols=503 Identities=23% Similarity=0.304 Sum_probs=396.7
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~i 271 (759)
.||+.... ++.+.|+++++ .+||++|+.+. ++.+||.||+++++++|++|.++|+++|++|+++++|+++++
T Consensus 26 ~~~~~~~~-~l~~~l~~~a~-~~p~~~al~~~------~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~ 97 (567)
T PRK06178 26 PEYPHGER-PLTEYLRAWAR-ERPQRPAIIFY------GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH 97 (567)
T ss_pred CCCCcCcc-cHHHHHHHHHH-HCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH
Confidence 46666654 57888999988 89999999976 578999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCc
Q 004348 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (759)
Q Consensus 272 va~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~ 351 (759)
++++||+++|++++|++|.++.+++.+++++++++++++++... +.+.+..+. ..+..+++.....
T Consensus 98 ~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~l~~~~~~-----~~~~~i~~~~~~~ 163 (567)
T PRK06178 98 IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA---------PVVEQVRAE-----TSLRHVIVTSLAD 163 (567)
T ss_pred HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH---------HHHHHhhcc-----CCcceEEEecccc
Confidence 99999999999999999999999999999999999999977532 222222111 1233333322111
Q ss_pred cccccc-cccCC------CCccchhhhcC---CCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH
Q 004348 352 AMTREN-TKWQD------GRDIWWQDVVP---KYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK 421 (759)
Q Consensus 352 ~~~~~~-~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~ 421 (759)
...... ..... .....|.+... ..+.........++++++|+|||||||.||||+++|++++.+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~ 243 (567)
T PRK06178 164 VLPAEPTLPLPDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYA 243 (567)
T ss_pred ccccccccccccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHH
Confidence 000000 00000 00011111111 111111223356789999999999999999999999996654444333
Q ss_pred HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc
Q 004348 422 YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (759)
Q Consensus 422 ~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~ 501 (759)
....+.++|+++..+|++|..|+...++.+|.+|+++++.++ +++..+++.|+++++|.+.++|..+..|.+...
T Consensus 244 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~- 318 (567)
T PRK06178 244 VAVVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLAR----WDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR- 318 (567)
T ss_pred HhccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC-
Confidence 446778899999999999999877778889999999999864 489999999999999999999999998887643
Q ss_pred ccccCCCCCeeEEEE--eCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCC--CC---CCCCCCCcCCCCCC
Q 004348 502 YVTRYSRKSLRVLGS--VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLP--GA---WPQKPGSATFPFFG 574 (759)
Q Consensus 502 ~~~~~~l~sLr~v~~--gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~--~~---~~~~~~~iG~p~~g 574 (759)
....+++++|.+.. .|++++++++++|.+.+|. ..+.+.||+||++........ .. ....++++|+|++|
T Consensus 319 -~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g 395 (567)
T PRK06178 319 -FAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGS--VLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPG 395 (567)
T ss_pred -CCCCCcchheeeeeccccccCCHHHHHHHHHHhCC--cccccccccccccccceeccccccCccccccCCcccccccCC
Confidence 23346678887654 4599999999999999872 334468999999765432211 00 11345679999999
Q ss_pred ceEEEEC-CCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------
Q 004348 575 VQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------------- 634 (759)
Q Consensus 575 ~~~~IvD-~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------- 634 (759)
++++|+| +++++++.|+.|||+|+| +.++.||+++++.+...|. +|||+|||+++
T Consensus 396 ~~v~v~d~~~~~~~~~g~~Gel~v~g--~~v~~gY~~~~~~~~~~~~---dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~ 470 (567)
T PRK06178 396 TEFKICDFETGELLPLGAEGEIVVRT--PSLLKGYWNKPEATAEALR---DGWLHTGDIGKIDEQGFLHYLGRRKEMLKV 470 (567)
T ss_pred cEEEEEcCCCCCcCCCCCceEEEEEC--CcccccccCChhhhhhccc---CCceeecceEEEecCCeEEEEecccccEEE
Confidence 9999999 679999999999999999 8999999999988877653 68999999988
Q ss_pred ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCC
Q 004348 635 SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 714 (759)
Q Consensus 635 ~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~l 714 (759)
+|++|+|.|||++|.++|+|.+++|++.+++..++.++++|+++++...+ .++|+++++++++.|++|. +++++++
T Consensus 471 ~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~-i~~v~~i 546 (567)
T PRK06178 471 NGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQVPVAFVQLKPGADLT---AAALQAWCRENMAVYKVPE-IRIVDAL 546 (567)
T ss_pred CCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcceEEEEEeCCCCcCC---HHHHHHHHHhcCcccCCce-EEEeccC
Confidence 89999999999999999999999999998887788999999987655433 5789999999999999996 8889999
Q ss_pred CCCCCCcccHHHHHHHHhc
Q 004348 715 PKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 715 P~T~~GKvdR~~L~~~~~~ 733 (759)
|+|++||++|++|++++++
T Consensus 547 P~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 547 PMTATGKVRKQDLQALAEE 565 (567)
T ss_pred CCCCccceeHHHHHHHHHh
Confidence 9999999999999998864
No 81
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=2.2e-60 Score=544.95 Aligned_cols=476 Identities=18% Similarity=0.244 Sum_probs=393.8
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
+.++|++++. .+|+++|+... ++.+||+||.++++++|..|.++|+++|++|+++++++.++++++|||+++|
T Consensus 4 ~~~~l~~~a~-~~p~~~~~~~~------~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G 76 (503)
T PRK04813 4 IIETIEEFAQ-TQPDFPAYDYL------GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAG 76 (503)
T ss_pred HHHHHHHHHH-hCCCceEEEeC------CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 5688888888 89999999876 5789999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC
Q 004348 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ 361 (759)
Q Consensus 282 av~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 361 (759)
++++|+++.++.+++..+++.++++++++++...... ..+. .+..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~------------ 123 (503)
T PRK04813 77 HAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------------------LGIP-VITLDE------------ 123 (503)
T ss_pred CEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------------------cCCc-EEehHH------------
Confidence 9999999999999999999999999999976541100 0000 111100
Q ss_pred CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchh
Q 004348 362 DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWI 441 (759)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~ 441 (759)
+.+...............++++++++|||||||.||||.++|++++. ...+....+++..+++++...|++|.
T Consensus 124 ------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~ 196 (503)
T PRK04813 124 ------LKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVS-FTNWMLEDFALPEGPQFLNQAPYSFD 196 (503)
T ss_pred ------hhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHH-HHHHHHHHcCCCcCceeeecCCcchh
Confidence 00000000011112234678899999999999999999999999554 44455566889999999999999998
Q ss_pred chhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCC
Q 004348 442 TGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPI 521 (759)
Q Consensus 442 ~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l 521 (759)
.+ .+.++.+|..|+++++.+... ..++..+++.++++++|++.++|++++.+..... ....+++++|.++++|+++
T Consensus 197 ~~-~~~~~~~l~~g~~~v~~~~~~-~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~--~~~~~~~~l~~i~~~G~~l 272 (503)
T PRK04813 197 LS-VMDLYPTLASGGTLVALPKDM-TANFKQLFETLPQLPINVWVSTPSFADMCLLDPS--FNEEHLPNLTHFLFCGEEL 272 (503)
T ss_pred Hh-HHHHHHHHhcCCEEEEcChhh-hcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhc--cCcccCCCceEEEEecCcC
Confidence 87 467889999999999987643 3488999999999999999999999988765432 2334678999999999999
Q ss_pred CHHHHHHHHHHhCCCCccEeeeeccccccceecccC-CC--CCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEe
Q 004348 522 NPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-PG--AWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 522 ~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~-~~--~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
++.+++++.+.++ ++++++.||+||++...+... .. .......++|+|+++++++|+|+++.+++.|+.|||+++
T Consensus 273 ~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 350 (503)
T PRK04813 273 PHKTAKKLLERFP--SATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGEIVIS 350 (503)
T ss_pred CHHHHHHHHHHCC--CceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceEEEEe
Confidence 9999999999986 478999999999976543211 11 112345679999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhcc-cCCcEEEeCCeee------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCS------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~-~~~g~y~TGDl~~------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| ++++.||+++++.+...|+. ...+||+|||+++ +|++|+|.|||++|.+||+|.+++|
T Consensus 351 ~--~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v 428 (503)
T PRK04813 351 G--PSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYLEDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVV 428 (503)
T ss_pred c--cccccccCCChhHhHHhhccCCCceeEECCceEEeeCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEE
Confidence 9 89999999999999888865 2335999999887 8999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCC-CCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGV-PYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~-~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
++.++...++.++++|++.++. ....++.++++++++++|+.|++|..|+++++||+|+|||++|++|++.++
T Consensus 429 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 429 VPYNKDHKVQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred EEeeCCCCccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 9988777778999999987642 222345678999999999999999999999999999999999999998875
No 82
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=2.8e-60 Score=549.25 Aligned_cols=491 Identities=23% Similarity=0.319 Sum_probs=389.5
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+++.++|+++++ .+|+++|+++. ++.+||.||.++++++|++|.++|+++||+|+++++|++++++++|||++
T Consensus 21 ~~~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~ 93 (541)
T TIGR03205 21 GTLPDLLSKAAA-DYGPRPALEFR------DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALK 93 (541)
T ss_pred CCHHHHHHHHHH-HcCCCceEEEC------CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 368899999888 89999999976 57899999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcc--ccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA--MTREN 357 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~--~~~~~ 357 (759)
+|++++|++|.++.+++.+++++++++++|+++... ....+.+.... ..+..+++...... .....
T Consensus 94 ~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 161 (541)
T TIGR03205 94 AGARVVHLSPLDGERALSHKLSDSGARLLITSDLAA-------LLPMALKFLEK-----GLLDRLIVCEDDNWGKVGTPQ 161 (541)
T ss_pred cCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchh-------hhHHHHHhhhc-----ccceEEEEecccccccccccc
Confidence 999999999999999999999999999999875321 11111111111 11233333332110 00000
Q ss_pred cc-cCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHH-----HhCCCCCcE
Q 004348 358 TK-WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY-----AFDYKPSDV 431 (759)
Q Consensus 358 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~-----~~~l~~~d~ 431 (759)
.. ........|.+.+.............++++++|+|||||||.||||+++|+++... ...... .+.....++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~-~~~~~~~~~~~~~~~~~~~~ 240 (541)
T TIGR03205 162 APIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSA-VSIYDVWGKPSRATRGDVER 240 (541)
T ss_pred cccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHH-HHHHHhhcccccccCCCCce
Confidence 00 00112233444443222222223456789999999999999999999999995432 222111 112233578
Q ss_pred EEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCe
Q 004348 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 511 (759)
Q Consensus 432 ~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sL 511 (759)
+++..+++|..++...++.++..|+++++.+. .++..+++.|+++++|++..+|+++..|++... ....+++++
T Consensus 241 ~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l 314 (541)
T TIGR03205 241 VICVLPLFHIYALTVILLRSLRRGDLISLHQR----FDVAAVFRDIEEKRATVFPGVPTMWIALANDPS--LEKRDLSSL 314 (541)
T ss_pred EEEeccHHHHHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc--ccccCcccc
Confidence 99999999988877778899999999888743 489999999999999999999999999886532 233467899
Q ss_pred eEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEE--CCCCcccCC
Q 004348 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV--DEKGVEIEG 589 (759)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~Iv--D~~g~~vp~ 589 (759)
|.+++||+++++++.+++.+.++ +++++.||+||++...+..... ....++++|+|++++.++|+ |+++++++.
T Consensus 315 ~~i~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~ 390 (541)
T TIGR03205 315 ATIGSGGAPLPVEVANFFERKTG---LKLKSGWGMTETCSPGTGHPPE-GPDKPGSIGLMLPGIELDVVSLDDPTKVLPP 390 (541)
T ss_pred ceEEEccccCCHHHHHHHHHHhC---CCeecccccccCCcccccCCCC-CCCCCCCcceeccCceeEEEecCCCCccCCC
Confidence 99999999999999999988876 7899999999998765533221 12346789999999998875 678899999
Q ss_pred CceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhc
Q 004348 590 ECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVS 650 (759)
Q Consensus 590 g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~ 650 (759)
|+.|||+|+| ++++.||+++++.+.+.|. ++||+|||+++ +|+||+|.|||++|.+
T Consensus 391 g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~ 465 (541)
T TIGR03205 391 GEVGELRIRG--PNVTRGYWNRPEESAEAFV---GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYE 465 (541)
T ss_pred CCeeEEEEec--CCccccccCChhhhHhhhc---cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHh
Confidence 9999999999 8999999999999887764 57999999987 8999999999999999
Q ss_pred CCccceEEEEeEecCCCCeEEEEEEEEcCCCC-CcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 651 HPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP-YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 651 ~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~-~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
|+.|.+++|++++++..++.++++++++++.. .+ .++|+++++++|++|++|..|+++++||+|++||++|++|+
T Consensus 466 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 466 HPGVQEVIVIGIPDQYRGEAAKAFVKLRPGAKPFS---LDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred CCCeeeEEEEecCCcccCceEEEEEEECCCCCcCC---HHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 99999999999998877889999999876542 22 57899999999999999999999999999999999999874
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-60 Score=545.57 Aligned_cols=466 Identities=22% Similarity=0.265 Sum_probs=379.6
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|++++ .++++|+++. ++.+||.||.++++++|++|+++ |++++++|+++++|++++++++|||++
T Consensus 6 ~~~~~l~~~a---~~~~~a~~~~------~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~ 76 (529)
T PRK07867 6 TVAELLLPLA---EDDDRGLYFE------DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAAL 76 (529)
T ss_pred cHHHHHHHhc---ccCCceEEEC------CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4778887765 3688999876 57899999999999999999997 899999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|+++.++.+++.+++++++++++|+++... .. ++.+. ..+. ++..+.
T Consensus 77 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~----~~~~~---~~~~-~~~~~~---------- 129 (529)
T PRK07867 77 SGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHA---------EL----LDGLD---PGVR-VINVDS---------- 129 (529)
T ss_pred cCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHH---------HH----HHhhc---cCce-EEEecc----------
Confidence 999999999999999999999999999999987642 11 11110 1111 222111
Q ss_pred cCCCCccchhhhcCCC-CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCc
Q 004348 360 WQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADC 438 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l 438 (759)
..|.+.+... ..........++++++|+|||||||.||||+++|+++. .........+++.++|+++...|+
T Consensus 130 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~-~~~~~~~~~~~~~~~d~~l~~~pl 202 (529)
T PRK07867 130 ------PAWADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVA-SAGVMLAQRFGLGPDDVCYVSMPL 202 (529)
T ss_pred ------ccHHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHH-HHHHHHHHhhCCCcccEEEEecch
Confidence 1133322211 11112234567899999999999999999999999954 445556667889999999999999
Q ss_pred chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 439 ~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
+|..++...++.+|..|+++++.+. +++..+++.++++++|++.++|+.+..++...... ....+++|. ++||
T Consensus 203 ~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~--~~~~~~lr~-~~gg 275 (529)
T PRK07867 203 FHSNAVMAGWAVALAAGASIALRRK----FSASGFLPDVRRYGATYANYVGKPLSYVLATPERP--DDADNPLRI-VYGN 275 (529)
T ss_pred hHHHHHHHHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcc--cccccceEE-EecC
Confidence 9999877777889999999998753 48999999999999999999999999988764321 123357884 5688
Q ss_pred CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC-CCCcccCCCc------
Q 004348 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGVEIEGEC------ 591 (759)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD-~~g~~vp~g~------ 591 (759)
+.+++.. ++|.+.+| +++++.||+||++...... + ....+++|.|+++ ++|+| +++++++.|+
T Consensus 276 ~~~~~~~-~~~~~~~g---~~l~~~YG~TE~~~~~~~~-~---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~ 345 (529)
T PRK07867 276 EGAPGDI-ARFARRFG---CVVVDGFGSTEGGVAITRT-P---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRL 345 (529)
T ss_pred CCChHHH-HHHHHHhC---CcEEEeecccccccccccC-C---CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccc
Confidence 8888764 66777776 7899999999998654321 1 1245679999999 67777 4788999988
Q ss_pred ------eEEEEE-ecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHH
Q 004348 592 ------SGYLCI-KSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVE 645 (759)
Q Consensus 592 ------~GEL~I-~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE 645 (759)
.|||++ +| ++++.||+++++.+...| .+|||+|||+++ +|+||+|.|||
T Consensus 346 ~~~~~~~Gel~i~~g--~~~~~gy~~~~~~~~~~~---~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE 420 (529)
T PRK07867 346 LNADEAIGELVNTAG--PGGFEGYYNDPEADAERM---RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIE 420 (529)
T ss_pred cccCCcceEEEEecC--CcccccccCChHhhhhhh---cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHH
Confidence 899999 99 899999999999887765 268999999988 89999999999
Q ss_pred HHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh--cCCCccccEEEEeCCCCCCCCCccc
Q 004348 646 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ--IGAFAAPDKIHWAPGLPKTRSGKIM 723 (759)
Q Consensus 646 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~--Lp~~~vP~~iv~v~~lP~T~~GKvd 723 (759)
++|.+||+|.+|+|++++++..++.++++|++.++...+ .++++++++++ |++|++|..|+++++||+|++||++
T Consensus 421 ~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~~~~~~---~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~ 497 (529)
T PRK07867 421 RILLRYPDATEVAVYAVPDPVVGDQVMAALVLAPGAKFD---PDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVL 497 (529)
T ss_pred HHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECCCCCCC---HHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCccee
Confidence 999999999999999999988899999999998765444 56788888775 9999999999999999999999999
Q ss_pred HHHHHHHHhcc
Q 004348 724 RRILRKIASRQ 734 (759)
Q Consensus 724 R~~L~~~~~~~ 734 (759)
|+.|+++....
T Consensus 498 r~~L~~~~~~~ 508 (529)
T PRK07867 498 KRQLSAEGVDC 508 (529)
T ss_pred HHHHHHhcCCC
Confidence 99999987644
No 84
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-60 Score=549.65 Aligned_cols=493 Identities=21% Similarity=0.328 Sum_probs=391.1
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+++.++|.++++ .+|+++|+++. ++.+||+||+++++++|++|.+.|+++||+|+|+++|++++++++|||++
T Consensus 23 ~~i~~~l~~~a~-~~p~~~a~~~~------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~ 95 (557)
T PRK07059 23 PSLADLLEESFR-QYADRPAFICM------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLR 95 (557)
T ss_pred CCHHHHHHHHHH-HcCCCceEEEc------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 468899999998 89999999986 67899999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc-----
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT----- 354 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~----- 354 (759)
+|++++|++|.++.+++.+++++++++++|+++... ..+.+.... .....+++........
T Consensus 96 ~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 161 (557)
T PRK07059 96 AGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFA---------TTVQQVLAK-----TAVKHVVVASMGDLLGFKGHI 161 (557)
T ss_pred cCeEEeccCcccCHHHHHHHHHccCceEEEEchhhH---------HHHHHhhcc-----cCCceeEEecccccccccccc
Confidence 999999999999999999999999999999876532 112111111 1222232221100000
Q ss_pred ---------ccccccCCCCccchhhhcCCCC-CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---
Q 004348 355 ---------RENTKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK--- 421 (759)
Q Consensus 355 ---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~--- 421 (759)
.....+.......|.+.+.... .........++++|+|+|||||||.||||+++|++++.+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~ 241 (557)
T PRK07059 162 VNFVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQ 241 (557)
T ss_pred cccccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhc
Confidence 0000011112233333332211 112223456889999999999999999999999996544322111
Q ss_pred HHhCCC---CCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhc
Q 004348 422 YAFDYK---PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (759)
Q Consensus 422 ~~~~l~---~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~ 498 (759)
..+... ....+++..|+.|.+++....+.++..|++.++.+.. .++..+++.++++++|.+.++|+++..|...
T Consensus 242 ~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~ 318 (557)
T PRK07059 242 PAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNP---RDIPGFIKELKKYQVHIFPAVNTLYNALLNN 318 (557)
T ss_pred ccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCC---cCHHHHHHHHHHhCCeeeecCHHHHHHHHcC
Confidence 111111 2346788899999887666777888999998887642 3788999999999999999999999999876
Q ss_pred CCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEE
Q 004348 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (759)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~ 578 (759)
.. ....+++++|.++.||+++++.+.++|.+.++ +++++.||+||++.+++..... ....++++|+|++|+.++
T Consensus 319 ~~--~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~ 392 (557)
T PRK07059 319 PD--FDKLDFSKLIVANGGGMAVQRPVAERWLEMTG---CPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVS 392 (557)
T ss_pred cC--cCcCCchhheEEEeccccCCHHHHHHHHHHhC---CCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEE
Confidence 43 23446789999999999999999999999887 7899999999998765433221 123467899999999999
Q ss_pred EECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEee
Q 004348 579 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRI 639 (759)
Q Consensus 579 IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI 639 (759)
|+|++++++|.|+.|||+|+| +.++.||+++++.+...|. .+|||+|||+++ +|++|
T Consensus 393 i~d~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~~~~~~~--~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i 468 (557)
T PRK07059 393 IRDDDGNDLPLGEPGEICIRG--PQVMAGYWNRPDETAKVMT--ADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNV 468 (557)
T ss_pred EECCCCCCCCCCCceEEEEeC--CccchhhhcCHHHHhhhcc--cCCceecCcEEEEcCCCcEEEecccccceEECCEEE
Confidence 999999999999999999999 8999999999998877664 378999999987 89999
Q ss_pred CHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCC
Q 004348 640 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRS 719 (759)
Q Consensus 640 ~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~ 719 (759)
+|.|||++|.+||+|.+++|+++++...++.++++|+..+.. .+ .++++++++++|+.|++|..+++++++|+|++
T Consensus 469 ~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~~-~~---~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~ 544 (557)
T PRK07059 469 YPNEIEEVVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDPA-LT---EEDVKAFCKERLTNYKRPKFVEFRTELPKTNV 544 (557)
T ss_pred cHHHHHHHHHhCCceeEEEEEecccCCCCeeEEEEEEeCCCC-CC---HHHHHHHHHHhcccccCCcEEEEeccCCCCcc
Confidence 999999999999999999999999888889999999876532 22 46899999999999999999999999999999
Q ss_pred CcccHHHHHHH
Q 004348 720 GKIMRRILRKI 730 (759)
Q Consensus 720 GKvdR~~L~~~ 730 (759)
||++|+.|+++
T Consensus 545 GK~~r~~L~~~ 555 (557)
T PRK07059 545 GKILRRELRDG 555 (557)
T ss_pred cceeHHHHHhh
Confidence 99999999864
No 85
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-60 Score=557.10 Aligned_cols=482 Identities=23% Similarity=0.308 Sum_probs=376.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|.++++ ++||++|++++ .+.+||+||.++++++|++|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 38 tl~~~l~~~a~-~~p~~~Ai~~~------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~ 110 (600)
T PRK08279 38 SLGDVFEEAAA-RHPDRPALLFE------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKL 110 (600)
T ss_pred cHHHHHHHHHH-hCCCCcEEEeC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 68899999998 89999999986 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++|+++... ..+.+..... .....++..+.... .
T Consensus 111 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~------~- 170 (600)
T PRK08279 111 GAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELV---------EAFEEARADL----ARPPRLWVAGGDTL------D- 170 (600)
T ss_pred CcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHH---------HHHHHHhhhh----cccceEEEecCccc------c-
Confidence 99999999999999999999999999999976532 2222222221 11122222211100 0
Q ss_pred CCCCccchhhhc---CCCCC--CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEe
Q 004348 361 QDGRDIWWQDVV---PKYPT--KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCT 435 (759)
Q Consensus 361 ~~~~~~~~~~~~---~~~~~--~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~ 435 (759)
....|.+.. ...+. ........++++++|+|||||||.||||+++|++++ +........+++.++|++++.
T Consensus 171 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~l~~~d~~l~~ 246 (600)
T PRK08279 171 ---DPEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWL-KAMGGFGGLLRLTPDDVLYCC 246 (600)
T ss_pred ---ccccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHH-HHHHHHHHhcCCCCCcEEEEe
Confidence 011122211 11111 111233467899999999999999999999999955 445555666899999999999
Q ss_pred cCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEE
Q 004348 436 ADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLG 515 (759)
Q Consensus 436 ~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~ 515 (759)
+|++|.+++...++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|+...... .....++|.+
T Consensus 247 ~pl~h~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~--~~~~~~l~~~- 319 (600)
T PRK08279 247 LPLYHNTGGTVAWSSVLAAGATLALRRK----FSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKP--TDRDHRLRLM- 319 (600)
T ss_pred cCchhhhhHHHHHHHHHhcCcEEEEcCC----CCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCc--cccCcceeEE-
Confidence 9999999987777788889999888653 48899999999999999999999999988764321 2234567754
Q ss_pred EeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCC----CceE---------EEECC
Q 004348 516 SVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFF----GVQP---------VIVDE 582 (759)
Q Consensus 516 ~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~----g~~~---------~IvD~ 582 (759)
+|+.++++++++|.+.++. ..++|.||+||++...+.. ....+++|++.+ +..+ .|.|.
T Consensus 320 -~g~~l~~~~~~~~~~~~~~--~~l~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~ 391 (600)
T PRK08279 320 -IGNGLRPDIWDEFQQRFGI--PRILEFYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDA 391 (600)
T ss_pred -ecCCCCHHHHHHHHHHhCc--ceeeeeecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCC
Confidence 4888999999999999983 4699999999998643321 123456676655 3322 23333
Q ss_pred CC--cccCCCceEEEE--EecCCCcccccccCChhhHHhhhcc----cCCcEEEeCCeee-------------------c
Q 004348 583 KG--VEIEGECSGYLC--IKSSWPGAFRTLYGDHERYETTYFK----PFPGYYFTGDGCS-------------------S 635 (759)
Q Consensus 583 ~g--~~vp~g~~GEL~--I~g~~~~v~~GY~~~~e~~~~~~~~----~~~g~y~TGDl~~-------------------~ 635 (759)
++ .+++.|+.|||+ |+| ++++.|| ++++.+...|+. +.++||+|||+|+ +
T Consensus 392 ~~~~~~~~~g~~Gel~~~i~~--~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~ 468 (600)
T PRK08279 392 DGRCIKVKPGEVGLLIGRITD--RGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWK 468 (600)
T ss_pred CCccccCCCCCceeEEEEecC--ccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEEC
Confidence 33 357889999998 678 8999999 888888777643 3467999999998 8
Q ss_pred cEeeCHHHHHHHHhcCCccceEEEEeEecCC-CCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCC
Q 004348 636 GHRIGTAEVESALVSHPQCAEAAVVGVEHEV-KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGL 714 (759)
Q Consensus 636 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~-~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~l 714 (759)
|+||+|.|||++|.+||+|.+|+|++++++. .+...+++++..++...+ .++|+++|+++||.|++|..|+++++|
T Consensus 469 G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~~~~~~~~~~vv~~~~~~~~---~~~l~~~l~~~L~~~~~P~~i~~v~~l 545 (600)
T PRK08279 469 GENVATTEVENALSGFPGVEEAVVYGVEVPGTDGRAGMAAIVLADGAEFD---LAALAAHLYERLPAYAVPLFVRLVPEL 545 (600)
T ss_pred CcccCHHHHHHHHhcCCCcceEEEEEeecCCCCCccceeEEEecCCccCC---HHHHHHHHHhhCccccCCeEEEeecCC
Confidence 9999999999999999999999999998764 344556666666443333 578999999999999999999999999
Q ss_pred CCCCCCcccHHHHHHHHhcc
Q 004348 715 PKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 715 P~T~~GKvdR~~L~~~~~~~ 734 (759)
|+|++||++|++|++++...
T Consensus 546 P~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 546 ETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred CCCcchhhhHHHHhhcCCCc
Confidence 99999999999999887655
No 86
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6e-60 Score=542.70 Aligned_cols=482 Identities=23% Similarity=0.325 Sum_probs=388.7
Q ss_pred hcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEec
Q 004348 208 RNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV 287 (759)
Q Consensus 208 ~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpl 287 (759)
.+++ .+||++|+++.. .++.+||.||.++++++|++|++.|+++|++|++++++++++++++|||+++|++++|+
T Consensus 5 ~~a~-~~p~~~a~~~~~----~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 5 IHAQ-TTPDKPAVIMAS----TGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCV 79 (511)
T ss_pred hhHh-hCCCceEEEecC----CCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecc
Confidence 4555 799999999752 25789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccc
Q 004348 288 FAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIW 367 (759)
Q Consensus 288 dp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 367 (759)
++.++.+++.+++++++++++++++... ..+.+....+ ......+.+..... ......
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~---------~~~~~~ 137 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKL---------DVARALLKQC----PGVRHRLVLDGDGE---------LEGFVG 137 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhH---------HHHHHHHhcC----CCceEEEEecCCCC---------Cccccc
Confidence 9999999999999999999999986532 2222222222 23333343332110 001122
Q ss_pred hhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEc--cchHHH--HHHHHHHHHhCCCCCcEEEEecCcchhch
Q 004348 368 WQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHT--TGGYMV--HTATTFKYAFDYKPSDVYWCTADCGWITG 443 (759)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~t--h~~~l~--~~~~~~~~~~~l~~~d~~l~~~~l~~~~g 443 (759)
|.+.....+. ......++.++|+|||||||.||||+++ |.+... .........+++.+++++++..|++|..+
T Consensus 138 ~~~~~~~~~~---~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~ 214 (511)
T PRK13391 138 YAEAVAGLPA---TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAP 214 (511)
T ss_pred HHHHhcCCCC---CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHH
Confidence 3333222111 1112344679999999999999999964 555321 22233445677888999999999999887
Q ss_pred hhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCH
Q 004348 444 HSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINP 523 (759)
Q Consensus 444 ~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~ 523 (759)
+ ...+.++..|+++++.+. +++..+++.++++++|++.++|+++..+.+.........+++++|.+++||+++++
T Consensus 215 ~-~~~~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 215 Q-RAVMLVIRLGGTVIVMEH----FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred H-HHHHHHHHcCceEEECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCH
Confidence 5 456778999999999753 48999999999999999999999999888764332334568899999999999999
Q ss_pred HHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCc
Q 004348 524 SAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPG 603 (759)
Q Consensus 524 ~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~ 603 (759)
++++++.+.+| ..+++.||+||++.+....... ....++++|+|+++ .++|+|+++++++.|+.|||+++| +
T Consensus 290 ~~~~~~~~~~g---~~v~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~Gel~~~g--~- 361 (511)
T PRK13391 290 QVKEQMIDWWG---PIIHEYYAATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILDDDGAELPPGEPGTIWFEG--G- 361 (511)
T ss_pred HHHHHHHHHcC---CceeeeeccccccceEEecCcc-ccccCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec--C-
Confidence 99999999887 6799999999998765432211 12456789999999 699999999999999999999999 7
Q ss_pred ccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEec
Q 004348 604 AFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEH 664 (759)
Q Consensus 604 v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~ 664 (759)
++.||+++++.+...+... ++||+|||+|+ +|++|++.|||++|.+||.|.+|+|+++++
T Consensus 362 ~~~gy~~~~~~~~~~~~~~-~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~ 440 (511)
T PRK13391 362 RPFEYLNDPAKTAEARHPD-GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPN 440 (511)
T ss_pred cceEEcCChhHhHHhhccC-CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCC
Confidence 8899999999988876542 58999999987 899999999999999999999999999988
Q ss_pred CCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 665 EVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 665 ~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
+..++.+++++++.++...++.+.++|+++++++||.|++|..|++++++|+|++||++|+.|++.+..
T Consensus 441 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 441 EDLGEEVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred cccCceeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 888889999999877654444557899999999999999999999999999999999999999998764
No 87
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.6e-61 Score=562.02 Aligned_cols=497 Identities=18% Similarity=0.179 Sum_probs=378.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+||++|+++.+.. +..+.+||+||.++++++|++|.++|+++||+|+|+++|++|+++++|||+++
T Consensus 40 ~l~~~l~~~a~-~~p~~~a~~~~~~~-~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 40 RLTDRLVHWAQ-EAPDRVFLAERGAD-GGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred cHHHHHHHHHH-HCCCCceeeeccCC-CceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 67889999998 89999999875211 22478999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCC-----HHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccc
Q 004348 281 GAVHSVVFAGFS-----SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (759)
Q Consensus 281 Gav~vpldp~~~-----~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (759)
|++++|++|.++ .+++.+++++++++++|+++... ....+.... .....++......
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~-----------~~~~~~~~~---~~~~~~i~~~~~~---- 179 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA-----------FARALAAVV---PADVEVVAVRGAV---- 179 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH-----------HHHHHhhhc---cCCceEEEecCCC----
Confidence 999999999998 79999999999999999875311 111111110 1111223222110
Q ss_pred cccccCCCCccchhhhcCCCCC---CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCC--CCc
Q 004348 356 ENTKWQDGRDIWWQDVVPKYPT---KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYK--PSD 430 (759)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~--~~d 430 (759)
.......|.+....... ........++|+++|+|||||||.||||++||++++.+ .......+++. .++
T Consensus 180 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~~~~ 253 (614)
T PRK08180 180 -----PGRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCAN-QQMLAQTFPFLAEEPP 253 (614)
T ss_pred -----CCcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHH-HHHHHhhccccCCCCc
Confidence 00011334444332111 11112346789999999999999999999999995544 44444445553 568
Q ss_pred EEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc--ccccCCC
Q 004348 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTRYSR 508 (759)
Q Consensus 431 ~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~--~~~~~~l 508 (759)
++++++|++|..++.+.++.+|++|+++++.++.....+...+++.++++++|+++++|+++..|++.... .....++
T Consensus 254 ~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~ 333 (614)
T PRK08180 254 VLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFF 333 (614)
T ss_pred EEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhc
Confidence 99999999999987778889999999999976432212345788899999999999999999998864321 1123457
Q ss_pred CCeeEEEEeCCCCCHHHHHHHHHH----hCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCC
Q 004348 509 KSLRVLGSVGEPINPSAWRWFFNV----VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKG 584 (759)
Q Consensus 509 ~sLr~v~~gGe~l~~~~~~~~~~~----~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g 584 (759)
++||.+++||++++++++++|.+. +|. ++++++.||+||++.+++..... ...++++|+|++|++++|+|++
T Consensus 334 ~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~~- 409 (614)
T PRK08180 334 SRLKLLFYAGAALSQDVWDRLDRVAEATCGE-RIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPVG- 409 (614)
T ss_pred cceeEEEEccCCCCHHHHHHHHHHHHhhcCC-CceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEecCC-
Confidence 899999999999999999999875 342 37899999999998655433222 2456899999999999999863
Q ss_pred cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee------------------------ccEeeC
Q 004348 585 VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------------------SGHRIG 640 (759)
Q Consensus 585 ~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------------~G~rI~ 640 (759)
..|||+|+| |+++.|||++|+.+.+.|. .+|||+|||+|+ +|++|+
T Consensus 410 ------~~GEi~vrg--~~v~~GY~~~p~~t~~~~~--~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~ 479 (614)
T PRK08180 410 ------GKLEVRVKG--PNVTPGYWRAPELTAEAFD--EEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVS 479 (614)
T ss_pred ------CCcEEEEec--CccchhhcCChhHhHhhcc--cCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEec
Confidence 359999999 8999999999999888764 379999999876 588776
Q ss_pred --HHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCC---------C--cH-HHHHHHHHHHHhhcCCCc---
Q 004348 641 --TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP---------Y--SE-ELRKSLVLAVRKQIGAFA--- 703 (759)
Q Consensus 641 --~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~---------~--~~-~l~~~l~~~l~~~Lp~~~--- 703 (759)
+.|||.++.+||.|++|+|++.+++ .+.|+|+++++.. . .+ ...++|+++++++|..|+
T Consensus 480 ~~p~Eie~~l~~~p~V~~a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 555 (614)
T PRK08180 480 VGPLRARAVSAGAPLVQDVVITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQA 555 (614)
T ss_pred chhhhHHHHhhcCchhheEEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhc
Confidence 7899999999999999999998765 4779998865410 0 00 013456777766666666
Q ss_pred -----cccEEEEeCCCCCCC------CCcccHHHHHHHHhcccCCCCCC
Q 004348 704 -----APDKIHWAPGLPKTR------SGKIMRRILRKIASRQLDELGDT 741 (759)
Q Consensus 704 -----vP~~iv~v~~lP~T~------~GKvdR~~L~~~~~~~~~~~~~~ 741 (759)
+|+++++++++|+|+ +||+.|+++.+.|+.+++++++.
T Consensus 556 ~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~lY~~ 604 (614)
T PRK08180 556 TGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEALYAD 604 (614)
T ss_pred cccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHHHhCC
Confidence 899999999999754 56889999999999999888763
No 88
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-60 Score=539.51 Aligned_cols=436 Identities=21% Similarity=0.297 Sum_probs=368.1
Q ss_pred cCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCC
Q 004348 213 GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFS 292 (759)
Q Consensus 213 ~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~ 292 (759)
+.++++|+++. ++.+||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|++|.++
T Consensus 12 ~~~~~~a~~~~------~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~ 80 (471)
T PRK07787 12 AADIADAVRIG------GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSG 80 (471)
T ss_pred ccCCceEEEeC------CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCC
Confidence 57899999986 689999999999999999996 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhc
Q 004348 293 SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVV 372 (759)
Q Consensus 293 ~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (759)
.+++.++++++++++++++..... ..+.... +.... ..|.
T Consensus 81 ~~~l~~~l~~~~~~~il~~~~~~~----------------------~~~~~~~-~~~~~--------------~~~~--- 120 (471)
T PRK07787 81 VAERRHILADSGAQAWLGPAPDDP----------------------AGLPHVP-VRLHA--------------RSWH--- 120 (471)
T ss_pred hHHHHHHHHhcCCCEEEecCCccc----------------------cccccee-eeccc--------------cccc---
Confidence 999999999999999998753110 0010000 00000 0010
Q ss_pred CCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHh
Q 004348 373 PKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPM 452 (759)
Q Consensus 373 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L 452 (759)
......++++++|+|||||||.||||+++|++++. ........+++.++|++++..|+.|..++...++.++
T Consensus 121 -------~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l 192 (471)
T PRK07787 121 -------RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAA-DLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPL 192 (471)
T ss_pred -------cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHH-HHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHH
Confidence 01123578999999999999999999999999544 4545556688999999999999999999888899999
Q ss_pred hcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHH
Q 004348 453 LNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (759)
Q Consensus 453 ~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (759)
..|+++++.+. +++..+++.|+ +++|++.++|+++..|.+... ....++++|.+++||++++++++++|.+.
T Consensus 193 ~~G~~~~~~~~----~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~---~~~~l~~l~~~~~gg~~~~~~~~~~~~~~ 264 (471)
T PRK07787 193 RIGNRFVHTGR----PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE---AARALRGARLLVSGSAALPVPVFDRLAAL 264 (471)
T ss_pred hcCCEEEecCC----CCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc---ccccccceeEEEECCCCCCHHHHHHHHHH
Confidence 99999988753 48999999999 999999999999999887532 12367899999999999999999999998
Q ss_pred hCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccC-CC-ceEEEEEecCCCcccccccC
Q 004348 533 VGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIE-GE-CSGYLCIKSSWPGAFRTLYG 610 (759)
Q Consensus 533 ~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp-~g-~~GEL~I~g~~~~v~~GY~~ 610 (759)
++ .++++.||+||++........ ....++++|+|++|+.++|+|+++++++ .| +.|||+|+| +++++||++
T Consensus 265 ~~---~~~~~~YG~tE~~~~~~~~~~--~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g--~~~~~gy~~ 337 (471)
T PRK07787 265 TG---HRPVERYGMTETLITLSTRAD--GERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRG--PTLFDGYLN 337 (471)
T ss_pred cC---CCeecccCccccCcceecCCC--CcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEEC--cccchhhcC
Confidence 86 689999999999865432221 1235678999999999999999999987 34 489999999 899999999
Q ss_pred ChhhHHhhhcccCCcEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeE
Q 004348 611 DHERYETTYFKPFPGYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQG 670 (759)
Q Consensus 611 ~~e~~~~~~~~~~~g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~ 670 (759)
+++.+.+.|.. +|||+|||+|+ +|+||+|.|||++|.+||.|.+++|++.++...++.
T Consensus 338 ~~~~t~~~~~~--~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 415 (471)
T PRK07787 338 RPDATAAAFTA--DGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQR 415 (471)
T ss_pred ChhhchhcccC--CCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeE
Confidence 99998877753 68999999987 799999999999999999999999999988877899
Q ss_pred EEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHH
Q 004348 671 IYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRK 729 (759)
Q Consensus 671 lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~ 729 (759)
+++||+..... + .++|+++++++|++|++|..|+++++||+|++||++|++|++
T Consensus 416 ~~a~v~~~~~~--~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 416 IVAYVVGADDV--A---ADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred EEEEEEeCCCC--C---HHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 99999984332 2 567999999999999999999999999999999999999975
No 89
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.3e-60 Score=599.41 Aligned_cols=489 Identities=23% Similarity=0.245 Sum_probs=392.3
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
+++.+.|+++++ ++||++|+++.. ++++||+||+++++++|+.|++ ++++||+|+++++|++|+++++|||++
T Consensus 615 ~~l~~~~~~~a~-~~p~~~a~~~~~-----~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~ 687 (1146)
T PRK08633 615 PPLAEAWIDTAK-RNWSRLAVADST-----GGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLL 687 (1146)
T ss_pred CCHHHHHHHHHH-hcCCCcEEEcCC-----CCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHH
Confidence 357788888888 899999998531 4689999999999999999987 489999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHH--HHHHhhcCCCccEEEEeccCccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAA--LDECAKSGISVDVCLTYENQSAMTREN 357 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~vi~~~~~~~~~~~~ 357 (759)
+|++++|++|.++.+++.+++++++++++++++.... .+.+. .... +....++..++...
T Consensus 688 ~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~~----~~~~~~~~~~~~~~----- 749 (1146)
T PRK08633 688 AGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLE---------KLKNKGFDLEL----PENVKVIYLEDLKA----- 749 (1146)
T ss_pred cCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHH---------HHhccCCchhc----ccCceEEEeehhcc-----
Confidence 9999999999999999999999999999998765321 11100 0001 11223333322110
Q ss_pred cccCCCCccchhhhcCCC--CC----CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcE
Q 004348 358 TKWQDGRDIWWQDVVPKY--PT----KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (759)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~ 431 (759)
.. .....+.+..... +. ........++|+++|+|||||||.||||+++|++++ .........+++.++|+
T Consensus 750 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~-~~~~~~~~~~~~~~~d~ 825 (1146)
T PRK08633 750 -KI--SKVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNIL-SNIEQISDVFNLRNDDV 825 (1146)
T ss_pred -cc--chhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHH-HHHHHHHHhcCCCCCCE
Confidence 00 0000111111100 00 000123567999999999999999999999999954 44555666788999999
Q ss_pred EEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCe
Q 004348 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSL 511 (759)
Q Consensus 432 ~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sL 511 (759)
+++.+|+.|..++...++.+++.|+++++.+.. .+++.+++.++++++|++.++|++++.+.+... ....+++++
T Consensus 826 ~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~~~~l 900 (1146)
T PRK08633 826 ILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDP---TDALGIAKLVAKHRATILLGTPTFLRLYLRNKK--LHPLMFASL 900 (1146)
T ss_pred EEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCC---CCHHHHHHHHHHcCCeEEEecHHHHHHHHhccc--cCcccCCCe
Confidence 999999999999877789999999999987542 488999999999999999999999999987543 234578899
Q ss_pred eEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC--------CCCCCCCcCCCCCCceEEEECC-
Q 004348 512 RVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA--------WPQKPGSATFPFFGVQPVIVDE- 582 (759)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~--------~~~~~~~iG~p~~g~~~~IvD~- 582 (759)
|.+++|||++++++.+++.+.+| +++++.||+||++..++...+.. ...+++++|+|++|++++|+|+
T Consensus 901 r~~~~gg~~~~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~ 977 (1146)
T PRK08633 901 RLVVAGAEKLKPEVADAFEEKFG---IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPE 977 (1146)
T ss_pred eeEEEcCCcCCHHHHHHHHHHhC---CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCC
Confidence 99999999999999999999987 78999999999987655432211 1135678999999999999995
Q ss_pred CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc-cCCcEEEeCCeee-------------------ccEeeCHH
Q 004348 583 KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCS-------------------SGHRIGTA 642 (759)
Q Consensus 583 ~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~-~~~g~y~TGDl~~-------------------~G~rI~~~ 642 (759)
+++++|.|+.|||+|+| |.++.||+++|+.+.+.+.. +.+|||+|||+|+ +|++|+|.
T Consensus 978 ~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ 1055 (1146)
T PRK08633 978 TFEELPPGEDGLILIGG--PQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLG 1055 (1146)
T ss_pred CCccCCCCCceEEEEcC--CCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHH
Confidence 68999999999999999 89999999999988877642 2348999999998 79999999
Q ss_pred HHHHHHhcCC--ccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHh-hcCCCccccEEEEeCCCCCCCC
Q 004348 643 EVESALVSHP--QCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRK-QIGAFAAPDKIHWAPGLPKTRS 719 (759)
Q Consensus 643 eIE~~L~~~p--~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~-~Lp~~~vP~~iv~v~~lP~T~~ 719 (759)
|||++|.+|| .+.+++|++++|+..++.++++++... .+ .+++++++++ ++|+|++|..+++++++|+|++
T Consensus 1056 eiE~~l~~~~~~~~~~~~v~~~~~~~~g~~~~~~v~~~~---~~---~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~ 1129 (1146)
T PRK08633 1056 AVEEELAKALGGEEVVFAVTAVPDEKKGEKLVVLHTCGA---ED---VEELKRAIKESGLPNLWKPSRYFKVEALPLLGS 1129 (1146)
T ss_pred HHHHHHHhccCCCCceEEEEeccCCCCCcEEEEEEecCc---cC---HHHHHHHHHhcCCCcccCCcEEEEecCcCCCCC
Confidence 9999999999 567899999999988999999998621 12 4678888875 6999999999999999999999
Q ss_pred CcccHHHHHHHHhc
Q 004348 720 GKIMRRILRKIASR 733 (759)
Q Consensus 720 GKvdR~~L~~~~~~ 733 (759)
||+||++|++++.+
T Consensus 1130 GKi~r~~L~~~~~~ 1143 (1146)
T PRK08633 1130 GKLDLKGLKELALA 1143 (1146)
T ss_pred CCCcHHHHHHHHHH
Confidence 99999999998654
No 90
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.4e-60 Score=547.59 Aligned_cols=493 Identities=23% Similarity=0.287 Sum_probs=390.5
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ .+|+++|++.. .+.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++
T Consensus 11 ~l~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 11 TLASLLDAHAR-ARPDAVALIDE------DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred CHHHHHHHHHH-hCCCCeEEecC------CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 57889999998 89999999954 678999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++|++++... +.+.+++....... .+.++.++.++.... ..
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~-- 150 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDA---LPPLRAIAVVDDAAD----AT-- 150 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccc---cCCcceEEEeccCcc----cC--
Confidence 999999999999999999999999999999766421 12222222211110 023344444431110 00
Q ss_pred CCCCccchhhhcCCCCCCC----CccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEec
Q 004348 361 QDGRDIWWQDVVPKYPTKC----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~ 436 (759)
.......|.+......... ......++++++++|||||||+||||+++|++++ .........+++.+++++++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~-~~~~~~~~~~~~~~~~~~l~~~ 229 (540)
T PRK06164 151 PAPAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLL-RHARAIARAYGYDPGAVLLAAL 229 (540)
T ss_pred CCCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHH-HHHHHHHHhcCCCCCCEEEEcC
Confidence 0000001111111100000 0112346889999999999999999999999954 4455566778899999999999
Q ss_pred CcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEE
Q 004348 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 516 (759)
Q Consensus 437 ~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~ 516 (759)
|++|.+++ ..++.+|..|+++++.+. +++..+++.|+++++|+++++|+++..|.+.. ....+++++|.+.+
T Consensus 230 p~~~~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~---~~~~~~~~l~~~~~ 301 (540)
T PRK06164 230 PFCGVFGF-STLLGALAGGAPLVCEPV----FDAARTARALRRHRVTHTFGNDEMLRRILDTA---GERADFPSARLFGF 301 (540)
T ss_pred CchhHHHH-HHHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh---cccCCCcceeeeee
Confidence 99999996 578999999999998753 48899999999999999999999999998862 23457889998877
Q ss_pred eC-CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCC-CCCCCCCcCCCC-CCceEEEECC-CCcccCCCce
Q 004348 517 VG-EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA-WPQKPGSATFPF-FGVQPVIVDE-KGVEIEGECS 592 (759)
Q Consensus 517 gG-e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~~~iG~p~-~g~~~~IvD~-~g~~vp~g~~ 592 (759)
+| .+...++.+++.+. + +++++.||+||++.+.+...... ......+.|.|+ +++.++|+|+ ++++++.|+.
T Consensus 302 ~~~~~~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~ 377 (540)
T PRK06164 302 ASFAPALGELAALARAR-G---VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGES 377 (540)
T ss_pred ccCCcchHHHHHHHhhc-C---CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCe
Confidence 76 55666677776654 4 88999999999987654332211 112334578876 7899999994 7899999999
Q ss_pred EEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCc
Q 004348 593 GYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQ 653 (759)
Q Consensus 593 GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~ 653 (759)
|||+|+| ++++.||+++++.+...|.. +|||+|||+|+ +|++|+|.|||++|.+||+
T Consensus 378 Gel~v~g--~~~~~gY~~~~~~t~~~~~~--~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~ 453 (540)
T PRK06164 378 GEIEIRA--PSLMRGYLDNPDATARALTD--DGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPG 453 (540)
T ss_pred eEEEEec--ccccccccCCchhhhhcccC--CCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCC
Confidence 9999999 89999999999998887653 78999999988 8999999999999999999
Q ss_pred cceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCC---cccHHHHHHH
Q 004348 654 CAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSG---KIMRRILRKI 730 (759)
Q Consensus 654 V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~G---KvdR~~L~~~ 730 (759)
|.+++|++++. .+++.++++|+++++...+ .++|+++++++||+|++|+.|++++++|+|++| |++|+.|+++
T Consensus 454 v~~~~v~~~~~-~~~~~~~~~vv~~~~~~~~---~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~ 529 (540)
T PRK06164 454 VAAAQVVGATR-DGKTVPVAFVIPTDGASPD---EAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREM 529 (540)
T ss_pred ceeEEEEecCC-CCceeEEEEEEeCCCCCCC---HHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHH
Confidence 99999999874 4567899999987765433 578999999999999999999999999999999 9999999998
Q ss_pred Hhcc
Q 004348 731 ASRQ 734 (759)
Q Consensus 731 ~~~~ 734 (759)
+...
T Consensus 530 ~~~~ 533 (540)
T PRK06164 530 AQAR 533 (540)
T ss_pred HHHh
Confidence 7654
No 91
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.6e-60 Score=549.84 Aligned_cols=492 Identities=21% Similarity=0.279 Sum_probs=387.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLK-DIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~-~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|.++++ .+|+++|+++. ++.+||+||.++++++|+.|. +.|+++||+|+++++|++++++++|||++
T Consensus 26 ~~~~~l~~~~~-~~~~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 98 (560)
T PRK08751 26 TVAEVFATSVA-KFADRPAYHSF------GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLR 98 (560)
T ss_pred cHHHHHHHHHH-hCCCCceEEEC------CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57889999998 89999999975 678999999999999999996 68999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc-----
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT----- 354 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~----- 354 (759)
+|++++|++|.++.+++.+++++++++++++++... ..+.+.... .....++.........
T Consensus 99 ~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 164 (560)
T PRK08751 99 AGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFG---------TTVQQVIAD-----TPVKQVITTGLGDMLGFPKAA 164 (560)
T ss_pred hCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhH---------HHHHHHhhC-----CCccEEEEechhhhcccccch
Confidence 999999999999999999999999999999987532 112222111 1122333221000000
Q ss_pred ---------cc-ccccCCCCccchhhhcCCCCC-CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH
Q 004348 355 ---------RE-NTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (759)
Q Consensus 355 ---------~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (759)
.. ...........|.+....... ..+.....++++++|+|||||||.||||+++|.+++.+.. .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~-~~~~~ 243 (560)
T PRK08751 165 LVNFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQ-QAHQW 243 (560)
T ss_pred hhhhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHH-HHHHh
Confidence 00 000000111223333222111 1122335678999999999999999999999999654433 23233
Q ss_pred hC----CCCC-cEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhc
Q 004348 424 FD----YKPS-DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD 498 (759)
Q Consensus 424 ~~----l~~~-d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~ 498 (759)
++ +.++ ++++...++.|..++....+.++..|+++++.... .++..+++.|+++++|++..+|+++..+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 320 (560)
T PRK08751 244 LAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNP---RDMPGFVKELKKTRFTAFTGVNTLFNGLLNT 320 (560)
T ss_pred hccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCc---CCHHHHHHHHHhcceeEecChHHHHHHHHcC
Confidence 33 3343 56778889999888666667778888888777542 4788999999999999999999999999876
Q ss_pred CCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEE
Q 004348 499 GNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPV 578 (759)
Q Consensus 499 ~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~ 578 (759)
.. ....++++||.+++||+++++++.+.|.+.++ +++++.||+||++..++.... ......+++|+|++++.++
T Consensus 321 ~~--~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~ 394 (560)
T PRK08751 321 PG--FDQIDFSSLKMTLGGGMAVQRSVAERWKQVTG---LTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDAC 394 (560)
T ss_pred cC--cCCcchhhheeeeeCCCCCCHHHHHHHHHHhC---CeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEE
Confidence 43 23456789999999999999999999999886 789999999999875543221 1123457899999999999
Q ss_pred EECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEee
Q 004348 579 IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRI 639 (759)
Q Consensus 579 IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI 639 (759)
|+|+++++++.|+.|||+|+| +.+++||+++++.+...|. .+|||+|||+|+ +|++|
T Consensus 395 i~d~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v 470 (560)
T PRK08751 395 IKDDAGTVLAIGEIGELCIKG--PQVMKGYWKRPEETAKVMD--ADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNV 470 (560)
T ss_pred EECCCCCCCCCCCceEEEEec--CccchhhcCChhhhhhccc--cCCCccccceEEEcCCceEEEEeechhheeECCEEE
Confidence 999999999999999999999 8899999999998876653 368999999987 89999
Q ss_pred CHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCC
Q 004348 640 GTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRS 719 (759)
Q Consensus 640 ~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~ 719 (759)
+|.|||++|..||+|.+|+|+++++...++.++++++.+.. ..+ .++|+++++++|++|++|..|+++++||+|++
T Consensus 471 ~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~~~-~~~---~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~ 546 (560)
T PRK08751 471 YPNEIEDVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKKDP-ALT---AEDVKAHARANLTGYKQPRIIEFRKELPKTNV 546 (560)
T ss_pred cHHHHHHHHHhCcCeeeeEEEecCCCCCCceEEEEEEcCCC-CCC---HHHHHHHHHHhhhhccCCeEEEEhhhCCCCcc
Confidence 99999999999999999999999988778888888876532 222 56899999999999999999999999999999
Q ss_pred CcccHHHHHHHH
Q 004348 720 GKIMRRILRKIA 731 (759)
Q Consensus 720 GKvdR~~L~~~~ 731 (759)
||++|++|++..
T Consensus 547 gKv~r~~L~~~~ 558 (560)
T PRK08751 547 GKILRRELRDAA 558 (560)
T ss_pred ccccHHHHHHhh
Confidence 999999999763
No 92
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=7.7e-61 Score=567.00 Aligned_cols=514 Identities=20% Similarity=0.221 Sum_probs=379.2
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEc---------CC--------CCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEA---------ND--------PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVII 262 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~---------~~--------~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai 262 (759)
+++.++|+++++ .+||++|+.+.. .+ .+..+.+||+||.++++++|++|.++|+++||+|+|
T Consensus 58 ~t~~~l~~~~~~-~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai 136 (696)
T PLN02387 58 TTLAALFEQSCK-KYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAI 136 (696)
T ss_pred CCHHHHHHHHHH-HCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 478899999999 899999995420 00 022345999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCcc
Q 004348 263 YLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVD 342 (759)
Q Consensus 263 ~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 342 (759)
+++|++||++++|||+++|+++|||++.++.+++.++|++++++++|++.... ..+......+ +.++
T Consensus 137 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~---------~~l~~~~~~~----~~l~ 203 (696)
T PLN02387 137 FADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL---------KKLIDISSQL----ETVK 203 (696)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH---------HHHHHHhhcc----CCce
Confidence 99999999999999999999999999999999999999999999999975431 1222222222 4567
Q ss_pred EEEEeccCcccccccc-ccCCCCccchhhhcCCCCC-CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHH
Q 004348 343 VCLTYENQSAMTRENT-KWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (759)
Q Consensus 343 ~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~ 420 (759)
.++.+++......... .........|++....... ..+.....++|+++|+|||||||.||||++||++++.+.....
T Consensus 204 ~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~ 283 (696)
T PLN02387 204 RVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVM 283 (696)
T ss_pred EEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHH
Confidence 7777764321000000 0000011234444322111 1122234689999999999999999999999999655443332
Q ss_pred HHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCC-----hhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD-----SGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 421 ~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d-----~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
....++.++|++++++|++|++++... +..+..|+++.+.... ...+ +..++..++++++|++.++|++++.|
T Consensus 284 ~~~~~~~~~d~~l~~lPl~Hi~~~~~~-~~~~~~g~~i~~g~~~-~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l 361 (696)
T PLN02387 284 TVVPKLGKNDVYLAYLPLAHILELAAE-SVMAAVGAAIGYGSPL-TLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRV 361 (696)
T ss_pred hhcCCCCCCCEEEEECcHHHHHHHHHH-HHHHHhCCEEEECChh-hhcccccccccCchhhHHHhCCcEEEehhHHHHHH
Confidence 222468889999999999999886543 3356677776653221 0001 23456789999999999999999988
Q ss_pred HhcCCcccc--------------------------------------------cCCC-CCeeEEEEeCCCCCHHHHHHHH
Q 004348 496 MRDGNEYVT--------------------------------------------RYSR-KSLRVLGSVGEPINPSAWRWFF 530 (759)
Q Consensus 496 ~~~~~~~~~--------------------------------------------~~~l-~sLr~v~~gGe~l~~~~~~~~~ 530 (759)
.+....... +..+ +++|.+++||+++++++.+++.
T Consensus 362 ~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~ 441 (696)
T PLN02387 362 RDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFIN 441 (696)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHH
Confidence 653110000 0001 5899999999999999988888
Q ss_pred HHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC-CCCc-cc--CCCceEEEEEecCCCcccc
Q 004348 531 NVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGV-EI--EGECSGYLCIKSSWPGAFR 606 (759)
Q Consensus 531 ~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD-~~g~-~v--p~g~~GEL~I~g~~~~v~~ 606 (759)
..+| +++++.||+||+++..+..... ....+++|+|+++++++|+| +++. .+ .++..|||+|+| |+++.
T Consensus 442 ~~~g---~~v~~~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrG--p~v~~ 514 (696)
T PLN02387 442 ICLG---APIGQGYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGG--PSVTL 514 (696)
T ss_pred HHcC---CCeeEeechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEecc--Ccccc
Confidence 7787 7899999999998765543322 24568999999999999998 4443 22 233469999999 89999
Q ss_pred cccCChhhHHhhhcccCCc--EEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEec
Q 004348 607 TLYGDHERYETTYFKPFPG--YYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEH 664 (759)
Q Consensus 607 GY~~~~e~~~~~~~~~~~g--~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~ 664 (759)
|||++|+.|.+.|..+.+| ||+|||+|+ +|++|+|.|||++|.+||.|.+|+|++.+.
T Consensus 515 GY~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~ 594 (696)
T PLN02387 515 GYFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPF 594 (696)
T ss_pred hhcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCC
Confidence 9999999999988543345 999999998 599999999999999999999999997642
Q ss_pred CCCCeEEEEEEEEcCCC----------C--------CcHHHHHHHHHHH-----HhhcCCCccccEEEEeCCCC------
Q 004348 665 EVKGQGIYAFVTLVEGV----------P--------YSEELRKSLVLAV-----RKQIGAFAAPDKIHWAPGLP------ 715 (759)
Q Consensus 665 ~~~~~~lva~Vv~~~~~----------~--------~~~~l~~~l~~~l-----~~~Lp~~~vP~~iv~v~~lP------ 715 (759)
...++|+|++.+.. . .++++.+++.+.+ +.+|..|.+|+.|.++++-.
T Consensus 595 ---~~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~ 671 (696)
T PLN02387 595 ---HSYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGL 671 (696)
T ss_pred ---cceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCc
Confidence 34688999986421 0 0122334444444 34699999999999988643
Q ss_pred CCCCCcccHHHHHHHHhcccCCCC
Q 004348 716 KTRSGKIMRRILRKIASRQLDELG 739 (759)
Q Consensus 716 ~T~~GKvdR~~L~~~~~~~~~~~~ 739 (759)
+|++.|+.|+.+++.|..++++++
T Consensus 672 lT~t~K~~R~~i~~~y~~~i~~ly 695 (696)
T PLN02387 672 VTAALKLKREQIRKKFKDDLKKLY 695 (696)
T ss_pred CChhhhhhhHHHHHHHHHHHHHHh
Confidence 688889999999999998877654
No 93
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.5e-60 Score=542.06 Aligned_cols=459 Identities=21% Similarity=0.232 Sum_probs=376.3
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
.+.+.|.++++ .+||++|+++. .+.+||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++
T Consensus 36 ~~~~~~~~~a~-~~p~~~a~~~~------~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~ 108 (516)
T PRK13383 36 NPYTLLAVTAA-RWPGRTAIIDD------DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLL 108 (516)
T ss_pred cHHHHHHHHHH-HCCCCcEEEeC------CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 35667788888 89999999875 568999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++++++... .. +... ...++.++...
T Consensus 109 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~----~~~~------~~~~~~~~~~~--------- 160 (516)
T PRK13383 109 GADVVPISTEFRSDALAAALRAHHISTVVADNEFA---------ER----IAGA------DDAVAVIDPAT--------- 160 (516)
T ss_pred CeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHH---------HH----HHhh------hcceEEeccch---------
Confidence 99999999999999999999999999999976532 11 1111 01122221110
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCc
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADC 438 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l 438 (759)
.... ... ..+...++.++|+|||||||+||||+++|.. .... .......+++.++|+++...|+
T Consensus 161 -----~~~~----~~~----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~pl 226 (516)
T PRK13383 161 -----AGAE----ESG----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQL-RSAVGVWVTILDRTRLRTGSRISVAMPM 226 (516)
T ss_pred -----hhhh----cCC----CCCCCCCCCcEEEECCCCCCCCCeeeecchh-hhhhhhHHhHHhhhccCCCCeEEEecCC
Confidence 0000 000 0112345678999999999999999999974 2211 1122234678899999999999
Q ss_pred chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 439 GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 439 ~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
+|.+++ ..++.++..|+++++... ++++.+++.++++++|.+.++|+++..|...........+++++|.+++||
T Consensus 227 ~h~~g~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 301 (516)
T PRK13383 227 FHGLGL-GMLMLTIALGGTVLTHRH----FDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSG 301 (516)
T ss_pred cchhhH-HHHHHHHhcCCEEEECCC----CCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECC
Confidence 999986 457788999999987642 489999999999999999999999999987643222234678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEe
Q 004348 519 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIK 598 (759)
Q Consensus 519 e~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~ 598 (759)
++++++++++|.+.+| ..+++.||+||++........ .....++++|+|++|++++|+|+++++++.|+.|||+++
T Consensus 302 ~~l~~~~~~~~~~~~g---~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 377 (516)
T PRK13383 302 DRLDPTLGQRFMDTYG---DILYNGYGSTEVGIGALATPA-DLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVG 377 (516)
T ss_pred CCCCHHHHHHHHHHcC---chhhhcccccccccceecccc-ccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEe
Confidence 9999999999999987 679999999999865543321 122356789999999999999999999999999999999
Q ss_pred cCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 599 SSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 599 g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| +.++.||++++... + .+|||+|||+++ +|++|+|.|||++|.+||.|.+++|
T Consensus 378 g--~~~~~~Y~~~~~~~----~--~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 449 (516)
T PRK13383 378 G--ELAGTRYTDGGGKA----V--VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAV 449 (516)
T ss_pred c--CcccccccCCchhh----e--ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEE
Confidence 9 88999999876421 2 378999999987 8999999999999999999999999
Q ss_pred EeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 660 VGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 660 v~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
+++++...++.++++|+++++...+ .++|+++++++++.|++|..|+++++||+|++||++|++|+
T Consensus 450 v~~~~~~~g~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 450 IGVPDERFGHRLAAFVVLHPGSGVD---AAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EeccccccCceEEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 9999888889999999987654433 46899999999999999999999999999999999999985
No 94
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-59 Score=539.31 Aligned_cols=490 Identities=23% Similarity=0.289 Sum_probs=387.1
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
++.++|+++++ ++||++|+++. .+.+||.||+++++++|+.|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 4 ~l~~~~~~~a~-~~p~~~a~~~~------~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~ 76 (533)
T PRK07798 4 NIADLFEAVAD-AVPDRVALVCG------DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKA 76 (533)
T ss_pred cHHHHHHHHHH-hCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhc
Confidence 47789999998 89999999986 688999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|+++.++.+++.+++++++++++++++... ..+.+....+ +....++.++.... ...
T Consensus 77 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----~~~ 138 (533)
T PRK07798 77 RAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFA---------PRVAEVLPRL----PKLRTLVVVEDGSG-----NDL 138 (533)
T ss_pred CeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhH---------HHHHHHhccC----CCccEEEEecCCcc-----ccc
Confidence 99999999999999999999999999999976531 2222222211 34445555543221 000
Q ss_pred CCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH--------HHhCC------
Q 004348 361 QDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK--------YAFDY------ 426 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~--------~~~~l------ 426 (759)
....+.|.+.+.......... ....+.++|+|||||||.||||+++|++++.+...... ..+.+
T Consensus 139 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (533)
T PRK07798 139 -LPGAVDYEDALAAGSPERDFG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAA 216 (533)
T ss_pred -CCccccHHHHHhccCCcCCCC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccC
Confidence 011234555544322221111 22345679999999999999999999996543222111 11122
Q ss_pred CCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHH-HHHhcCCccccc
Q 004348 427 KPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVR-SLMRDGNEYVTR 505 (759)
Q Consensus 427 ~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~-~l~~~~~~~~~~ 505 (759)
..+++++...|+.|..++ +.++.+|+.|+++++.+.. .+++..+++.|+++++|++.++|..+. .+.+... ....
T Consensus 217 ~~~~~~~~~~pl~~~~~~-~~~~~~l~~G~~~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~~~~ 292 (533)
T PRK07798 217 GPGMRRFPAPPLMHGAGQ-WAAFAALFSGQTVVLLPDV--RFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-ARGP 292 (533)
T ss_pred CCCceEEEecchhhhhhH-HHHHHHHhcCceEEEecCC--CcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-cccc
Confidence 567899999999999985 5889999999999998743 348999999999999999999986553 3333321 1123
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcC--CCCCCceEEEECCC
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSAT--FPFFGVQPVIVDEK 583 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG--~p~~g~~~~IvD~~ 583 (759)
.+++++|.+++||+++++++.++|.+.++ +..+++.||+||++.+....... .....| ++.++..++|+|++
T Consensus 293 ~~~~~l~~i~~gG~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~----~~~~~g~~~~~~~~~~~i~~~~ 366 (533)
T PRK07798 293 YDLSSLFAIASGGALFSPSVKEALLELLP--NVVLTDSIGSSETGFGGSGTVAK----GAVHTGGPRFTIGPRTVVLDED 366 (533)
T ss_pred CCCCceEEEEECCCCCCHHHHHHHHHHcC--CCeEEeeecccccccccccCCCC----CCccCCCCccCCCceEEEECCC
Confidence 46789999999999999999999999885 47899999999997544322111 112233 78899999999999
Q ss_pred CcccCCCce--EEEEEecCCCcccccccCChhhHHhhhcc-cCCcEEEeCCeee-------------------ccEeeCH
Q 004348 584 GVEIEGECS--GYLCIKSSWPGAFRTLYGDHERYETTYFK-PFPGYYFTGDGCS-------------------SGHRIGT 641 (759)
Q Consensus 584 g~~vp~g~~--GEL~I~g~~~~v~~GY~~~~e~~~~~~~~-~~~g~y~TGDl~~-------------------~G~rI~~ 641 (759)
+++++.|.. |+|+. + +.++.||+++++.+.+.|.. +..+||+|||+++ +|++|+|
T Consensus 367 ~~~~~~g~~~~g~l~~-~--~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~ 443 (533)
T PRK07798 367 GNPVEPGSGEIGWIAR-R--GHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFP 443 (533)
T ss_pred CCCCCCCCCCeeEEEe-e--cCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCH
Confidence 999999877 77765 4 47899999999998887753 2345999999987 7999999
Q ss_pred HHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCc
Q 004348 642 AEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGK 721 (759)
Q Consensus 642 ~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GK 721 (759)
.|||++|.++|.|.+++|+++++...++.++++|+++++...+ .++|+++++++|+.|++|..++++++||+|++||
T Consensus 444 ~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK 520 (533)
T PRK07798 444 EEVEEALKAHPDVADALVVGVPDERWGQEVVAVVQLREGARPD---LAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGK 520 (533)
T ss_pred HHHHHHHHhCccceeEEEEeccCcccCceEEEEEEECCCCCCC---HHHHHHHHhhhcccCCCCeEEEEcccCCCCCcch
Confidence 9999999999999999999998887788999999988765433 6789999999999999999999999999999999
Q ss_pred ccHHHHHHHHhc
Q 004348 722 IMRRILRKIASR 733 (759)
Q Consensus 722 vdR~~L~~~~~~ 733 (759)
++|+.|++++++
T Consensus 521 ~~~~~~~~~~~~ 532 (533)
T PRK07798 521 ADYRWAKEQAAE 532 (533)
T ss_pred hhHHHHhhhhcc
Confidence 999999998864
No 95
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.4e-60 Score=559.54 Aligned_cols=511 Identities=18% Similarity=0.203 Sum_probs=381.2
Q ss_pred cccHHHHHHhhcccccCCCeEEEEEEc---CCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHH
Q 004348 198 ITNICYNCLDRNIEAGLGDKVAIYWEA---NDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAM 274 (759)
Q Consensus 198 ~~n~~~~~l~~~~~~~~pd~~Al~~~~---~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~ 274 (759)
..++++++|+++++ ++|+++|+.+.. ...+..+.+||+||.++++++|++|.++|+++||+|+|+++|++||++++
T Consensus 40 ~~~t~~~~~~~~~~-~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~ 118 (660)
T PLN02430 40 DITTAWDIFSKSVE-KYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAM 118 (660)
T ss_pred CCCCHHHHHHHHHH-hCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 45689999999998 899999997642 11122345799999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc
Q 004348 275 LACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (759)
Q Consensus 275 LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (759)
|||+++|++++|+++.++++++.+++++++++++|+++... ...+....... +.++.+++++......
T Consensus 119 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~--------~~~~~~~~~~~----~~l~~ii~~~~~~~~~ 186 (660)
T PLN02430 119 EACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKI--------KELLEPDCKSA----KRLKAIVSFTSVTEEE 186 (660)
T ss_pred HHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHH--------HHHHhhhcccC----CCceEEEEECCCChHH
Confidence 99999999999999999999999999999999999865421 11111111111 3456666664321100
Q ss_pred ccccccCCCCccchhhhcCCCCC-CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH--HH--hCCCCC
Q 004348 355 RENTKWQDGRDIWWQDVVPKYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK--YA--FDYKPS 429 (759)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~--~~--~~l~~~ 429 (759)
.............|++++..... ........++|+++|+|||||||.||||++||++++.+...... .. .+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02430 187 SDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHD 266 (660)
T ss_pred hhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCC
Confidence 00000000112345555432211 11122346899999999999999999999999996554332211 11 257789
Q ss_pred cEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc------cc
Q 004348 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE------YV 503 (759)
Q Consensus 430 d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~------~~ 503 (759)
|++++++|++|.++.... +.++..|++++++.. ++..+++.|+++++|++.++|.++..+.+.... ..
T Consensus 267 d~~ls~lPl~H~~~~~~~-~~~l~~G~~i~~~~~-----~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~ 340 (660)
T PLN02430 267 DVYLSFLPLAHILDRMIE-EYFFRKGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPR 340 (660)
T ss_pred CEEEEeCcHHHHHHHHHH-HHHHHcCCEEEEeCC-----ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 999999999999886554 457889999988753 567899999999999999999999877642100 00
Q ss_pred --------------------------cc----------CCC-CCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeecc
Q 004348 504 --------------------------TR----------YSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQ 546 (759)
Q Consensus 504 --------------------------~~----------~~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~ 546 (759)
.. ..+ ++||.+++||+++++++.+++ +.++ .+++++.||+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~-~~~~--~~~i~~~YG~ 417 (660)
T PLN02430 341 RRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL-RVTS--CAFVVQGYGL 417 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH-HHhc--CCCeeeecch
Confidence 00 001 589999999999999986655 4455 3679999999
Q ss_pred ccccceecccCCCCCCCCCCCcCCCCCCceEEEEC--CCC-cccCCCceEEEEEecCCCcccccccCChhhHHhhhcccC
Q 004348 547 TETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD--EKG-VEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (759)
Q Consensus 547 TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD--~~g-~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~ 623 (759)
||+++..+...+.. ...++++|+|+++++++|+| +.+ .+++.+..|||+|+| |+++.|||++|+.+.+.| .
T Consensus 418 TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg--~~v~~GY~~~~e~t~~~~---~ 491 (660)
T PLN02430 418 TETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRG--KCLFSGYYKNPELTEEVM---K 491 (660)
T ss_pred hhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecC--CCccccccCChHHhhhhh---h
Confidence 99987655443322 23568999999999999986 333 556666789999999 899999999999998876 3
Q ss_pred CcEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCC--
Q 004348 624 PGYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV-- 681 (759)
Q Consensus 624 ~g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~-- 681 (759)
+|||+|||+|+ +|++|+|.+||++|.+||.|.+|+|++. ..++.++|+|++++..
T Consensus 492 dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~---~~~~~~~A~vv~~~~~~~ 568 (660)
T PLN02430 492 DGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGD---SFKSMLVAVVVPNEENTN 568 (660)
T ss_pred ccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEec---CCcceEEEEEEcCHHHHH
Confidence 79999999988 5999999999999999999999999973 2357899999986421
Q ss_pred --------C-------CcHHHHHHHHHHH-----HhhcCCCccccEEEEeCCC------CCCCCCcccHHHHHHHHhccc
Q 004348 682 --------P-------YSEELRKSLVLAV-----RKQIGAFAAPDKIHWAPGL------PKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 682 --------~-------~~~~l~~~l~~~l-----~~~Lp~~~vP~~iv~v~~l------P~T~~GKvdR~~L~~~~~~~~ 735 (759)
. ..+++.+.|++.+ ++.|+.|.++++|+++++- .+|+++|+.|+.+.+.|...+
T Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i 648 (660)
T PLN02430 569 KWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEI 648 (660)
T ss_pred HHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHH
Confidence 0 1122333333333 2359999999999998743 489999999999999999888
Q ss_pred CCCC
Q 004348 736 DELG 739 (759)
Q Consensus 736 ~~~~ 739 (759)
++++
T Consensus 649 ~~ly 652 (660)
T PLN02430 649 DEMY 652 (660)
T ss_pred HHHH
Confidence 7765
No 96
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.8e-60 Score=562.29 Aligned_cols=501 Identities=19% Similarity=0.228 Sum_probs=369.4
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcC-----------CC----------CcceeeeHHHHHHHHHHHHHHHHHcCCCCCCE
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEAN-----------DP----------GVDATLTYSQLLQQVCQLANYLKDIGVKKGDA 259 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~-----------~~----------~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~ 259 (759)
+++++|+++++ .+||++|+.+... .+ +..+.+||+||.++++++|++|+++|+++||+
T Consensus 70 t~~~~~~~~~~-~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~ 148 (700)
T PTZ00216 70 NFLQRLERICK-ERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSN 148 (700)
T ss_pred CHHHHHHHHHH-hCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCE
Confidence 68999999999 8999999998420 00 13689999999999999999999999999999
Q ss_pred EEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCC
Q 004348 260 VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGI 339 (759)
Q Consensus 260 Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 339 (759)
|+|+++|++||++++|||+++|++++|+++.++++++.++|++++++++|++.... ..+....... ..
T Consensus 149 V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~---------~~l~~~~~~~---~~ 216 (700)
T PTZ00216 149 VAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV---------PNLLRLMKSG---GM 216 (700)
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH---------HHHHHhhhhc---cC
Confidence 99999999999999999999999999999999999999999999999999975421 1111111110 01
Q ss_pred CccEEEEeccCccccccccccCCCCccchhhhcCCC----CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHH
Q 004348 340 SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY----PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH 415 (759)
Q Consensus 340 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~ 415 (759)
....+++++.... ...........|++.+... ..........++|+++|+|||||||.||||++||++++.+
T Consensus 217 ~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 217 PNTTIIYLDSLPA----SVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred CceEEEEECCCcc----ccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 1124555543211 0000111223455554322 1111123346899999999999999999999999996544
Q ss_pred HHHHHHHHh----C-CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHH-------HHHHcCCc
Q 004348 416 TATTFKYAF----D-YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWD-------IVDKYKVT 483 (759)
Q Consensus 416 ~~~~~~~~~----~-l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~-------~i~~~~vT 483 (759)
.......+ + +.++|++++++|++|.++... .+..+..|+++++. ++..+++ .|+++++|
T Consensus 293 -~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~-------~~~~l~~~~~~~~~~l~~~~pT 363 (700)
T PTZ00216 293 -ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG-------SPRTLTDTFARPHGDLTEFRPV 363 (700)
T ss_pred -HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC-------CHHHhhhhhccccchHHHcCCc
Confidence 33333222 2 467899999999999887543 34457778876652 3444544 68899999
Q ss_pred EEEehHHHHHHHHhcCCccc-----------------------c----------------cCCCCCeeEEEEeCCCCCHH
Q 004348 484 IFYTAPTLVRSLMRDGNEYV-----------------------T----------------RYSRKSLRVLGSVGEPINPS 524 (759)
Q Consensus 484 ~l~~~Ps~l~~l~~~~~~~~-----------------------~----------------~~~l~sLr~v~~gGe~l~~~ 524 (759)
++.++|++++.|.+...... . ....++||.+++||++++++
T Consensus 364 ~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~ 443 (700)
T PTZ00216 364 FLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAA 443 (700)
T ss_pred EEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHH
Confidence 99999999988764311000 0 00015799999999999999
Q ss_pred HHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCC--cccCCCceEEEEEecCCC
Q 004348 525 AWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKG--VEIEGECSGYLCIKSSWP 602 (759)
Q Consensus 525 ~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g--~~vp~g~~GEL~I~g~~~ 602 (759)
+.+++...++ ++++.||+||+++..+..... ....+++|+|++|++++|+|+++ ...+++..|||+|+| |
T Consensus 444 ~~~~~~~~~~----~l~~~YG~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG--~ 515 (700)
T PTZ00216 444 TQEFVNVVFG----MVIQGWGLTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRG--P 515 (700)
T ss_pred HHHHHHHHhh----hHhhccCcccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcC--C
Confidence 9987776653 799999999998665443322 24568999999999999999764 334556679999999 8
Q ss_pred cccccccCChhhHHhhhcccCCcEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceE--EEE
Q 004348 603 GAFRTLYGDHERYETTYFKPFPGYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEA--AVV 660 (759)
Q Consensus 603 ~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea--~Vv 660 (759)
++++|||++|+.|.+.|.. +|||+|||+|+ +|+||+|.|||++|.+||.|.++ +|+
T Consensus 516 ~v~~GY~~~pe~T~~~f~~--dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~ 593 (700)
T PTZ00216 516 FLFKGYYKQEELTREVLDE--DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVL 593 (700)
T ss_pred cccchhcCChhHhhhhccc--cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEE
Confidence 9999999999999998854 78999999998 89999999999999999999973 444
Q ss_pred eEecCCCCeEEEEEEEEcCCC----------C-------CcHHHHHHHHHHH-----HhhcCCCccccEEEEeCC-----
Q 004348 661 GVEHEVKGQGIYAFVTLVEGV----------P-------YSEELRKSLVLAV-----RKQIGAFAAPDKIHWAPG----- 713 (759)
Q Consensus 661 ~~~~~~~~~~lva~Vv~~~~~----------~-------~~~~l~~~l~~~l-----~~~Lp~~~vP~~iv~v~~----- 713 (759)
+.+ ....++|+|++.... . .++++.+.+.+.+ +..|..|..++.|+++++
T Consensus 594 ~~~---~~~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~ 670 (700)
T PTZ00216 594 VHP---ARSYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPE 670 (700)
T ss_pred Eec---CCceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCC
Confidence 332 236789999875310 0 0122233333333 246889999999998864
Q ss_pred -CCCCCCCcccHHHHHHHHhcccCCCCC
Q 004348 714 -LPKTRSGKIMRRILRKIASRQLDELGD 740 (759)
Q Consensus 714 -lP~T~~GKvdR~~L~~~~~~~~~~~~~ 740 (759)
=-+|+++|+.|+++.+.|...+++++.
T Consensus 671 ~g~lT~t~K~~R~~i~~~y~~~i~~ly~ 698 (700)
T PTZ00216 671 NGVLTAAMKLKRRVIDERYADLIKELFA 698 (700)
T ss_pred CCCCChhhccchHHHHHHHHHHHHHHhc
Confidence 247999999999999999988877653
No 97
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.7e-59 Score=533.42 Aligned_cols=465 Identities=25% Similarity=0.330 Sum_probs=379.4
Q ss_pred ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEE
Q 004348 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (759)
Q Consensus 230 ~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~ii 309 (759)
++.+||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++++++++|
T Consensus 9 ~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 9 GEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred CcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCcccCCcccchHHHHHHHHHHHhhcCC-CccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCC
Q 004348 310 TSNAVKRGPKAIHLKDIVDAALDECAKSGI-SVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAED 388 (759)
Q Consensus 310 t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 388 (759)
+++... ..+.+..... . .++.+++..... .....|.+........ .....++
T Consensus 89 ~~~~~~---------~~~~~~~~~~----~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~---~~~~~~~ 141 (502)
T PRK08276 89 VSAALA---------DTAAELAAEL----PAGVPLLLVVAGPV-----------PGFRSYEEALAAQPDT---PIADETA 141 (502)
T ss_pred Eccchh---------hHHHHHhhhc----cccccEEEEeCCCC-----------CccccHHHHHhcCCCC---CCCCCCc
Confidence 976532 1122222211 1 334444332110 0112233333221111 1234567
Q ss_pred cEEEEeccCCCCCCcEEEEccchHHHHH-----HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecC
Q 004348 389 PLFLLYTSGSTGKPKGVLHTTGGYMVHT-----ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (759)
Q Consensus 389 ~a~IiyTSGSTG~PKgV~~th~~~l~~~-----~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~ 463 (759)
.++|+|||||||.||||+++|.++.... .......+....++++++..+++|..++.+ .+.++.+|+++++.+.
T Consensus 142 ~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~ 220 (502)
T PRK08276 142 GADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEK 220 (502)
T ss_pred ceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCC
Confidence 8999999999999999999988744321 111112222346789999999999888544 4578999999988754
Q ss_pred CCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeee
Q 004348 464 APTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDT 543 (759)
Q Consensus 464 ~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~ 543 (759)
+++..+++.++++++|++.++|+++..|++.........+++++|.+++|||+++.++++++.+.++ ..+++.
T Consensus 221 ----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~---~~~~~~ 293 (502)
T PRK08276 221 ----FDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG---PIIHEY 293 (502)
T ss_pred ----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC---cHhhhh
Confidence 4899999999999999999999999999887643334557899999999999999999999999887 679999
Q ss_pred eccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccC
Q 004348 544 WWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (759)
Q Consensus 544 YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~ 623 (759)
||+||++.+++..... .....+++|+|+ ++.++|+|+++++++.|+.|||+++| +.++.||+++++.+...+..
T Consensus 294 yG~tE~~~~~~~~~~~-~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~-- 367 (502)
T PRK08276 294 YASSEGGGVTVITSED-WLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFEM--DGYPFEYHNDPEKTAAARNP-- 367 (502)
T ss_pred cccccccceeEecCcc-ccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEEC--CCccchhcCCHHHHHHHhcC--
Confidence 9999998755433221 124557899999 88999999999999999999999999 78999999999998888764
Q ss_pred CcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCc
Q 004348 624 PGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS 684 (759)
Q Consensus 624 ~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~ 684 (759)
+|||+|||+++ +|++|++.|||.+|.+||+|.+|+|+++.++..++.++++|+++++....
T Consensus 368 ~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 447 (502)
T PRK08276 368 HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAG 447 (502)
T ss_pred CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCC
Confidence 58999999998 89999999999999999999999999998888889999999998776555
Q ss_pred HHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc
Q 004348 685 EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 685 ~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~ 735 (759)
+.+.++++++++++|+.||+|..++++++||+|++||++|+.|++.+..+.
T Consensus 448 ~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~ 498 (502)
T PRK08276 448 DALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGR 498 (502)
T ss_pred hhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhh
Confidence 556778999999999999999999999999999999999999999987543
No 98
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.2e-59 Score=534.62 Aligned_cols=450 Identities=24% Similarity=0.361 Sum_probs=335.8
Q ss_pred cCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccE
Q 004348 264 LPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDV 343 (759)
Q Consensus 264 ~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 343 (759)
++|++|+++++|||+++|++++|+++.++.+++.++|++++++++|+++......+... .+...... .....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~---~~~~~~~~-----~~~~~ 72 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALP---LYSKVVEA-----APAKA 72 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeec---chhhhhhc-----ccceE
Confidence 68999999999999999999999999999999999999999999999765321111111 11111111 11222
Q ss_pred EEEeccCccccccccccCCCCccchhhhcCCCC-------CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHH
Q 004348 344 CLTYENQSAMTRENTKWQDGRDIWWQDVVPKYP-------TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT 416 (759)
Q Consensus 344 vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~ 416 (759)
+++....... ... .......|++++.... .........++|+++|+|||||||.||||+++|++++.+.
T Consensus 73 i~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 73 IVLPAAGEPV---AVP-LREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred EEEeccCccc---CCc-cccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 2221111000 000 0001233444431100 0111112356899999999999999999999999965443
Q ss_pred HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHH
Q 004348 417 ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (759)
Q Consensus 417 ~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~ 496 (759)
......+++.++|++++.+|++|+.++ +.++.+|+.|+++++.+.. +++..+++.|+++++|++.++|++++.|+
T Consensus 149 -~~~~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~---~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 149 -SDGWAHMDIQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGA---PLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred -HHHHHhcCCCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCC---CCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 333445788999999999999999985 5788999999999998642 36789999999999999999999999998
Q ss_pred hcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCce
Q 004348 497 RDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQ 576 (759)
Q Consensus 497 ~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~ 576 (759)
+.........++++||.+++|||++++++.+++.+.++. ++++++.||+||++...+..... .+.+.+++|+|++|++
T Consensus 224 ~~~~~~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~ 301 (499)
T PLN03051 224 HTGAFAMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGY-YKPVIEYCGGTELASGYISSTLL-QPQAPGAFSTASLGTR 301 (499)
T ss_pred hcCccccccCCchhheEEEecCCCCCHHHHHHHHHhccc-cceeEeeeccccccceeeccccc-CCCCCccccCCCCCce
Confidence 754211224577899999999999999999888774321 26799999999987543322211 1235678999999999
Q ss_pred EEEECCCCcccCCC--ceEEEEEecCCCcccccccCChhhHHhhhccc-------CCcEEEeCCeee-------------
Q 004348 577 PVIVDEKGVEIEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKP-------FPGYYFTGDGCS------------- 634 (759)
Q Consensus 577 ~~IvD~~g~~vp~g--~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~-------~~g~y~TGDl~~------------- 634 (759)
++|+|++|++++.| +.|||+|+||+.+++.|||+++. ...|+.. ..+||+|||+|+
T Consensus 302 ~~ivd~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~--~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~ 379 (499)
T PLN03051 302 FVLLNDNGVPYPDDQPCVGEVALAPPMLGASDRLLNADH--DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRA 379 (499)
T ss_pred EEEECCCCCCCCCCCCcceEEEEecCcCCCCccccCCcc--cceeeecCCccccCCcceeecCCeEEECCCCcEEEEecc
Confidence 99999999999988 58999999954344789998653 2334321 123899999998
Q ss_pred ------ccEeeCHHHHHHHHhc-CCccceEEEEeEecCCCC-eEEEEEE---EEcCCC--CCcHHHHHHHHHHHHhhcCC
Q 004348 635 ------SGHRIGTAEVESALVS-HPQCAEAAVVGVEHEVKG-QGIYAFV---TLVEGV--PYSEELRKSLVLAVRKQIGA 701 (759)
Q Consensus 635 ------~G~rI~~~eIE~~L~~-~p~V~ea~Vv~~~~~~~~-~~lva~V---v~~~~~--~~~~~l~~~l~~~l~~~Lp~ 701 (759)
+|+||+|.|||++|.+ ||+|.+|+|++++++..+ +.++||| +++++. ...+++.+.++++|+++|++
T Consensus 380 ~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~ 459 (499)
T PLN03051 380 DDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNP 459 (499)
T ss_pred CCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCC
Confidence 8999999999999996 999999999999998877 7899999 776653 22355667777788888998
Q ss_pred CccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 702 FAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 702 ~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
|+.|..|+++++||+|++|||+|++|++.+.+.
T Consensus 460 ~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 492 (499)
T PLN03051 460 LFKVSRVKIVPELPRNASNKLLRRVLRDQLKKE 492 (499)
T ss_pred ccCCceEEEcCCCCCCCCccHHHHHHHHHHHHh
Confidence 778888999999999999999999999887654
No 99
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.1e-58 Score=538.60 Aligned_cols=499 Identities=20% Similarity=0.257 Sum_probs=381.5
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
....|++++. .+|+++|+++. .+.+||+||.++++++|..|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 22 ~~~~~~~~~~-~~p~~~a~~~~------~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G 94 (567)
T PLN02479 22 PLWFLERAAV-VHPTRKSVVHG------SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAG 94 (567)
T ss_pred HHHHHHHHHh-hCCCceEEEEC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCC
Confidence 5677888888 89999999975 5689999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhc---CCCccEEEEeccCcccccccc
Q 004348 282 AVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKS---GISVDVCLTYENQSAMTRENT 358 (759)
Q Consensus 282 av~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~vi~~~~~~~~~~~~~ 358 (759)
++++|++|.++.+++.+++++++++++|+++... +...+....+... ......++.+...........
T Consensus 95 ~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (567)
T PLN02479 95 AVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF---------TLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQ 165 (567)
T ss_pred cEEEEeccccCHHHHHHHHhhcCceEEEEchhhh---------hHHHHHHHHHhhcccccCCCceEEEecCCcCCccccc
Confidence 9999999999999999999999999999976542 1122222221100 011123333332110000000
Q ss_pred ccCCCCccchhhhcCCCCCCCC-ccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecC
Q 004348 359 KWQDGRDIWWQDVVPKYPTKCE-VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTAD 437 (759)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~ 437 (759)
.........|.+.+........ ......+++++|+|||||||.||||+++|++++.. .......+++..++++++.+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~-~~~~~~~~~~~~~~~~~~~~p 244 (567)
T PLN02479 166 YALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLM-ALSNALIWGMNEGAVYLWTLP 244 (567)
T ss_pred cccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHH-HHHHHhhcCCCCCCEEEEecc
Confidence 0001123345555443221111 11223457888999999999999999999995443 333344678889999999999
Q ss_pred cchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEe
Q 004348 438 CGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSV 517 (759)
Q Consensus 438 l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~g 517 (759)
++|..++...++.+++.|.++++. . +++..+++.++++++|++.++|+++..|.+.... ....+++++|.++++
T Consensus 245 ~~h~~~~~~~~~~~~~~g~~~~~~-~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~~~l~~~~~~ 318 (567)
T PLN02479 245 MFHCNGWCFTWTLAALCGTNICLR-Q----VTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKS-ETILPLPRVVHVMTA 318 (567)
T ss_pred hhhhhhHHHHHHHHhhcCceEecc-C----CCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhh-cccccccceeEEEEc
Confidence 999888655544556666665542 2 4899999999999999999999999999876431 111256899999999
Q ss_pred CCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccC-C-------CC-CCCCCCCcCCCCCCce-EEEEC-CCCcc
Q 004348 518 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPL-P-------GA-WPQKPGSATFPFFGVQ-PVIVD-EKGVE 586 (759)
Q Consensus 518 Ge~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~-~-------~~-~~~~~~~iG~p~~g~~-~~IvD-~~g~~ 586 (759)
|++++++++++|.+. + .++++.||+||+++.++... . .. ......+.|.+.+|+. ++|+| +++++
T Consensus 319 G~~~~~~~~~~~~~~-~---~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~ 394 (567)
T PLN02479 319 GAAPPPSVLFAMSEK-G---FRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKP 394 (567)
T ss_pred CCCCCHHHHHHHHhc-C---CceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcc
Confidence 999999999998774 4 78999999999865432111 0 00 0011235788888875 88999 47888
Q ss_pred cCCC--ceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHH
Q 004348 587 IEGE--CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVE 645 (759)
Q Consensus 587 vp~g--~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE 645 (759)
++.+ +.|||+++| ++++.|||++++.+.+.|. +|||+|||+++ +|+||+|.|||
T Consensus 395 ~~~~g~~~GEl~v~g--~~~~~GY~~~~~~t~~~~~---~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE 469 (567)
T PLN02479 395 VPADGKTMGEIVMRG--NMVMKGYLKNPKANEEAFA---NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVE 469 (567)
T ss_pred cCCCCCCceEEEEec--cchhhhhhcCcccccchhc---CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHH
Confidence 8754 689999999 8999999999999988874 68999999987 89999999999
Q ss_pred HHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCc--HHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCccc
Q 004348 646 SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS--EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 723 (759)
Q Consensus 646 ~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~--~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvd 723 (759)
++|.+||.|.+|+|++.++...++.++++|++.++...+ +.+.++|+++++++||+|++|+.+++ +++|+|++||++
T Consensus 470 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~ 548 (567)
T PLN02479 470 NVVYTHPAVLEASVVARPDERWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQ 548 (567)
T ss_pred HHHHhCcccceeeEEeccchhcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCee
Confidence 999999999999999998877788999999987654321 34467899999999999999998876 789999999999
Q ss_pred HHHHHHHHhc
Q 004348 724 RRILRKIASR 733 (759)
Q Consensus 724 R~~L~~~~~~ 733 (759)
|+.|++.+..
T Consensus 549 r~~L~~~~~~ 558 (567)
T PLN02479 549 KHVLRAKAKE 558 (567)
T ss_pred HHHHHHHHHh
Confidence 9999988654
No 100
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-58 Score=534.38 Aligned_cols=495 Identities=21% Similarity=0.302 Sum_probs=388.1
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.++|+++++ .+|+++|+++. ++.+||+||.++++++|.+|.+ .|+++|++|+++++|++++++++|||++
T Consensus 24 ~l~~~l~~~a~-~~p~~~a~~~~------~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~ 96 (560)
T PRK08974 24 SLVDMFEQAVA-RYADQPAFINM------GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILR 96 (560)
T ss_pred cHHHHHHHHHH-hCCCCceEEEC------CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 57889999988 89999999975 6789999999999999999984 8999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccc--
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTREN-- 357 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-- 357 (759)
+|++++|++|.++.+++.+++++++++++++++... +.+.+.... .....++............
T Consensus 97 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 162 (560)
T PRK08974 97 AGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFA---------HTLEKVVFK-----TPVKHVILTRMGDQLSTAKGT 162 (560)
T ss_pred cCcEEeccCccCCHHHHHHHHHhcCceEEEEecccc---------HHHHHHhhh-----cCcceEEEecccccccccccc
Confidence 999999999999999999999999999999976532 112221111 1122222111000000000
Q ss_pred -------------cccCCCCccchhhhcCCCC-CCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH
Q 004348 358 -------------TKWQDGRDIWWQDVVPKYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA 423 (759)
Q Consensus 358 -------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~ 423 (759)
..........+.+...... .........++++++|+|||||||.||||+++|++++.+... ....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~-~~~~ 241 (560)
T PRK08974 163 LVNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQ-AKAA 241 (560)
T ss_pred cccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHH-HHHh
Confidence 0000000011111111111 011112346789999999999999999999999996544322 2222
Q ss_pred hC---CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCC
Q 004348 424 FD---YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (759)
Q Consensus 424 ~~---l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~ 500 (759)
+. ...++.++...++.|.+++....+.++..|+++++.... .++..+++.++++++|++..+|++++.|.....
T Consensus 242 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 318 (560)
T PRK08974 242 YGPLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNP---RDIPGFVKELKKYPFTAITGVNTLFNALLNNEE 318 (560)
T ss_pred hccccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCc---cCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcC
Confidence 22 234567888889988887666677788899998876432 378889999999999999999999999987643
Q ss_pred cccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEE
Q 004348 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 580 (759)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~Iv 580 (759)
....++++||.+++||+++++.++++|.+.+| +++++.||+||++..++..... .....+++|+|++++.++|+
T Consensus 319 --~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g---~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~ 392 (560)
T PRK08974 319 --FQELDFSSLKLSVGGGMAVQQAVAERWVKLTG---QYLLEGYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLV 392 (560)
T ss_pred --cccCCccceeEEEecCccCCHHHHHHHHHHhC---CcEEeeecccccCceeeccCCC-CcccCCccccCcCCCEEEEE
Confidence 23346789999999999999999999999876 7899999999998765543222 12346789999999999999
Q ss_pred CCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCH
Q 004348 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGT 641 (759)
Q Consensus 581 D~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~ 641 (759)
|+++++++.|+.|||+|+| +.+++||+++++.+...| .+|||+|||+++ +|++|+|
T Consensus 393 ~~~~~~~~~g~~Gel~v~g--~~~~~gy~~~~~~~~~~~---~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~ 467 (560)
T PRK08974 393 DDDGNEVPPGEPGELWVKG--PQVMLGYWQRPEATDEVI---KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYP 467 (560)
T ss_pred CCCCCCCCCCCceEEEEec--CCcchhhcCChhhhhhhh---hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECH
Confidence 9999999999999999999 899999999998887765 378999999988 7999999
Q ss_pred HHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCc
Q 004348 642 AEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGK 721 (759)
Q Consensus 642 ~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GK 721 (759)
.|||++|.+||+|.+++|++.++...++.++++|+..+.. .+ .++++++++++|+.|++|..++++++||+|++||
T Consensus 468 ~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~-~~---~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK 543 (560)
T PRK08974 468 NEIEDVVMLHPKVLEVAAVGVPSEVSGEAVKIFVVKKDPS-LT---EEELITHCRRHLTGYKVPKLVEFRDELPKSNVGK 543 (560)
T ss_pred HHHHHHHHhCCCeeEEEEEeeecCCcceEEEEEEECCCCC-CC---HHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCc
Confidence 9999999999999999999999888888888888765432 22 4678999999999999999999999999999999
Q ss_pred ccHHHHHHHHhccc
Q 004348 722 IMRRILRKIASRQL 735 (759)
Q Consensus 722 vdR~~L~~~~~~~~ 735 (759)
++|+.|++....+.
T Consensus 544 ~~r~~l~~~~~~~~ 557 (560)
T PRK08974 544 ILRRELRDEARAKV 557 (560)
T ss_pred EeHHHHHHHHHhhh
Confidence 99999999877553
No 101
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-59 Score=548.65 Aligned_cols=507 Identities=18% Similarity=0.193 Sum_probs=373.9
Q ss_pred ccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 199 TNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 199 ~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
..++.++|+++++ .+||++|+++.+...+..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++|||+
T Consensus 48 ~~~l~~~l~~~a~-~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 126 (624)
T PRK12582 48 PRSIPHLLAKWAA-EAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAM 126 (624)
T ss_pred ccCHHHHHHHHHH-HCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 3468899999998 899999998753211334789999999999999999999999999999999999999999999999
Q ss_pred HhCCeEEecCCCCCH-----HHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccc
Q 004348 279 RIGAVHSVVFAGFSS-----DSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAM 353 (759)
Q Consensus 279 kaGav~vpldp~~~~-----~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~ 353 (759)
++|++++|++|.++. +++.+++++++++++|+++... ....+..+.. ..++ ++.+.....
T Consensus 127 ~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----------~~~~~~~~~~--~~~~-~i~~~~~~~- 191 (624)
T PRK12582 127 QAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP-----------FARALAALDL--LDVT-VVHVTGPGE- 191 (624)
T ss_pred HcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH-----------HHHHHHhhhh--cCce-EEEEcCCCc-
Confidence 999999999999985 9999999999999999875421 1111111110 1122 233322110
Q ss_pred cccccccCCCCccchhhhcCCCCCC---CCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCC--
Q 004348 354 TRENTKWQDGRDIWWQDVVPKYPTK---CEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKP-- 428 (759)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~-- 428 (759)
......|.+........ .......++++++|+|||||||.||||+++|++++.+ .......+....
T Consensus 192 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~~ 262 (624)
T PRK12582 192 --------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCAN-IAMQEQLRPREPDP 262 (624)
T ss_pred --------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHH-HHHHHHhccccCCC
Confidence 00112233333221111 0112346789999999999999999999999996544 333333344444
Q ss_pred -CcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc--cccc
Q 004348 429 -SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE--YVTR 505 (759)
Q Consensus 429 -~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~--~~~~ 505 (759)
.++++..+|++|.+++...++.+|..|+++++.++.........+++.++++++|++.++|++++.|++.... ....
T Consensus 263 ~~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~ 342 (624)
T PRK12582 263 PPPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRR 342 (624)
T ss_pred CCceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHH
Confidence 5799999999999987777888999999999975431111224567778899999999999999988764221 1122
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHh----CCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEEC
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVV----GDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD 581 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~----g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD 581 (759)
.++++||.+++||+++++++.++|.+.+ |. ++++++.||+||++.++...... ..+.+++|+|++|++++|+
T Consensus 343 ~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~- 418 (624)
T PRK12582 343 SFFKNLRLMAYGGATLSDDLYERMQALAVRTTGH-RIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLA- 418 (624)
T ss_pred HHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCC-CceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEc-
Confidence 3578999999999999999999998863 32 36899999999998755422211 2456789999999999985
Q ss_pred CCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee------------------------ccE
Q 004348 582 EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------------------SGH 637 (759)
Q Consensus 582 ~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------------~G~ 637 (759)
+.|+.|||+|+| |+++.|||++|+.+.+.|. .+|||+|||+|+ +|+
T Consensus 419 ------~~G~~GEl~vrg--~~v~~GY~~~p~~t~~~f~--~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~ 488 (624)
T PRK12582 419 ------PVGDKYEVRVKG--PNVTPGYHKDPELTAAAFD--EEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGT 488 (624)
T ss_pred ------cCCCceEEEEEC--CcccccccCCccchhhhcC--ccCCccccceEEecCCcCCCCceEEeccchhhEecCCCc
Confidence 457789999999 8999999999999887764 379999999875 699
Q ss_pred eeCHHHHH--HHHhcCCccceEEEEeEecCCCCeEEEEEEEEcC----------CCC-----CcHHHHHHHHHHH---Hh
Q 004348 638 RIGTAEVE--SALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVE----------GVP-----YSEELRKSLVLAV---RK 697 (759)
Q Consensus 638 rI~~~eIE--~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~----------~~~-----~~~~l~~~l~~~l---~~ 697 (759)
+|+|.+|| .++.+||.|.+|+|++++++. +.+.|++.. +.. ..+++.+.++..| ++
T Consensus 489 ~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~----~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 564 (624)
T PRK12582 489 WVSVGTLRPDAVAACSPVIHDAVVAGQDRAF----IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNA 564 (624)
T ss_pred EechHHHHHHHHHhcCcchheEEEEcCCCCc----EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHh
Confidence 99998885 688999999999999987664 444444321 110 1122333333222 33
Q ss_pred hcCCCc-cccEEEEeCCCCC------CCCCcccHHHHHHHHhcccCCCCCCCCCCChhhH
Q 004348 698 QIGAFA-APDKIHWAPGLPK------TRSGKIMRRILRKIASRQLDELGDTSTLADPGVV 750 (759)
Q Consensus 698 ~Lp~~~-vP~~iv~v~~lP~------T~~GKvdR~~L~~~~~~~~~~~~~~~~~~~p~~~ 750 (759)
.+|.+. +|+++++++++|+ |++||+.|+++.+.|.++++++++. ...|+++
T Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ly~~--~~~~~~~ 622 (624)
T PRK12582 565 EAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVERLYAE--PPGPDVI 622 (624)
T ss_pred hcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHHHhcC--CCCCCcc
Confidence 466666 9999999999875 6778889999999999999998864 4666654
No 102
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-58 Score=563.31 Aligned_cols=509 Identities=18% Similarity=0.175 Sum_probs=376.0
Q ss_pred HHHHHHHhhChHHHHHHhhcc----cccccccccccccccccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEE
Q 004348 146 LEMYKRSVEDPAGFWADIASE----FYWKEKWGQRVCSENLDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIY 221 (759)
Q Consensus 146 ~~ll~~~~~~p~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~ 221 (759)
.+-+..++.+|++.+++++.+ +.-...+++ + . . ....++.++|+++++ ++||++|++
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~------~----~~~~sl~~ll~~~a~-~~pd~~Al~ 467 (994)
T PRK07868 407 ARGAADAAVAANRSVRTLAVETARTLPRLARLGQ-I-------N------D----HTRISLGRIIAEQAR-DAPKGEFLL 467 (994)
T ss_pred hhhHHHHHHHhhhhhHHHHHHHHHhhhhHHHhhh-c-------C------C----CCCccHHHHHHHHHH-HCCCCeEEE
Confidence 344567778899999888531 111122222 1 0 0 111257899999998 899999999
Q ss_pred EEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHH
Q 004348 222 WEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIM 301 (759)
Q Consensus 222 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~ 301 (759)
+. ++.+||+||+++++++|+.|+++|+++||+|+|+++|++++++++|||+++|++++|++|. +++.++++
T Consensus 468 ~~------~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl~p~---~~l~~il~ 538 (994)
T PRK07868 468 FD------GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLMPPD---TDLAAAVR 538 (994)
T ss_pred eC------CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---hhHHHHHh
Confidence 86 5789999999999999999999999999999999999999999999999999999999985 68999999
Q ss_pred hcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccC-CCCccchhhhcCCC---CC
Q 004348 302 DCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQ-DGRDIWWQDVVPKY---PT 377 (759)
Q Consensus 302 ~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~ 377 (759)
++++++||+++... ... ... ...+++++..... ..... ......+.+..... +.
T Consensus 539 ~s~~~~li~~~~~~------------~~~-~~~------~~~iiv~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (994)
T PRK07868 539 LGGVTEIITDPTNL------------EAA-RQL------PGRVLVLGGGESR---DLDLPDDADVIDMEKIDPDAVELPG 596 (994)
T ss_pred ccCCeEEEEChHHH------------HHH-Hhc------CceEEEecCCccc---cccCCcchhhhhhhhcCcccccCCc
Confidence 99999999975431 111 111 1334544321100 00000 00011111111100 00
Q ss_pred CCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcE
Q 004348 378 KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGAS 457 (759)
Q Consensus 378 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~t 457 (759)
........++|++||+|| ||||.||++.++|.+++... ......+++.++|++++.+|++|+.++...++.++..|++
T Consensus 597 ~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~-~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~ 674 (994)
T PRK07868 597 WYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSA-FGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR 674 (994)
T ss_pred ccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHH-HhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE
Confidence 001112246899999999 57777777777877644332 2334457889999999999999999965444444445555
Q ss_pred EEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCC
Q 004348 458 VVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSR 537 (759)
Q Consensus 458 lvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~ 537 (759)
+++.+. ++++.+++.|++|+||+++++|++++.|++... ....++++||.++ |+.++++++++|.+.++ .
T Consensus 675 vvl~~~----~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~--~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~--~ 744 (994)
T PRK07868 675 IALSRG----LDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPA--FVLHGNHPVRLFI--GSGMPTGLWERVVEAFA--P 744 (994)
T ss_pred EEecCC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC--CccCCCCceEEEe--cCCCCHHHHHHHHHHhC--c
Confidence 555432 499999999999999999999999999987632 2234677999876 34599999999999987 3
Q ss_pred ccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCc-eEEE-----------ECCCC--cccCCCceEEEEEecCCCc
Q 004348 538 CPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGV-QPVI-----------VDEKG--VEIEGECSGYLCIKSSWPG 603 (759)
Q Consensus 538 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~-~~~I-----------vD~~g--~~vp~g~~GEL~I~g~~~~ 603 (759)
++++|.||+||++.+.. ... ..+++++|+|++|+ +++| +|++| ++++.|+.|||++++ ++
T Consensus 745 ~~l~~~YG~TE~~~~~~-~~~---~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~--~~ 818 (994)
T PRK07868 745 AHVVEFFATTDGQAVLA-NVS---GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARA--RG 818 (994)
T ss_pred hheeeeeeccccccccc-ccC---CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEec--CC
Confidence 78999999999875433 221 23568999999998 5655 35666 678899999999999 43
Q ss_pred ccccccCChhhHHh-hhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEe
Q 004348 604 AFRTLYGDHERYET-TYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVE 663 (759)
Q Consensus 604 v~~GY~~~~e~~~~-~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~ 663 (759)
|+ +|+.+.. .+|.+.+|||+|||+|+ +|.+|+|.|||++|.+||+|.+|+|++++
T Consensus 819 ----~~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~ 893 (994)
T PRK07868 819 ----PI-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVE 893 (994)
T ss_pred ----CC-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeec
Confidence 33 4544332 24444578999999998 58899999999999999999999999998
Q ss_pred cCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 664 HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 664 ~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
++. ++.++|||+++++...+ .++|+++|++ ||+||+|+.|+++++||+|+|||++|++|++...
T Consensus 894 d~~-~~~~~a~Vv~~~~~~~~---~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 894 VGG-RQLAVAAVTLRPGAAIT---AADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred CCC-CceEEEEEEeCCCCcCC---HHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 875 67899999998765444 5789999985 9999999999999999999999999999987644
No 103
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1e-58 Score=522.91 Aligned_cols=411 Identities=18% Similarity=0.200 Sum_probs=337.9
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEE
Q 004348 232 TLTYSQLLQQVCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVIT 310 (759)
Q Consensus 232 ~lTY~eL~~~a~~lA~~L~~~Gv-~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit 310 (759)
-+.|+||+++++++|++|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999998 57999999999999999999999999999999999999999999999999999998
Q ss_pred eCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcE
Q 004348 311 SNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPL 390 (759)
Q Consensus 311 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a 390 (759)
++..... . ... .. . ......+++++
T Consensus 99 ~~~~~~~-----------------------~-----~~~----------------------~~--~---~~~~~~~~~~~ 123 (452)
T PRK07445 99 LDQLKLS-----------------------H-----PPP----------------------LP--S---QGILPNLETGW 123 (452)
T ss_pred cCccccc-----------------------c-----CCC----------------------CC--c---cccCCCCCCcE
Confidence 6542100 0 000 00 0 00113468999
Q ss_pred EEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCCh
Q 004348 391 FLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDS 470 (759)
Q Consensus 391 ~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~ 470 (759)
+++|||||||.||||++||++++ .........+++.+ ++.++.+|++|.+|+ +.++.+|+.|+++++.+.. +.
T Consensus 124 ~i~~TSGTTG~PKgV~~t~~~l~-~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~----~~ 196 (452)
T PRK07445 124 IMIPTGGSSGQIRFAIHTWETLT-ASVQGFQRYFQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYK----RL 196 (452)
T ss_pred EEEeCCCCCCCCcEEEechHHHH-HHHHHHHHHhcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChH----hc
Confidence 99999999999999999999954 44444455566665 467888999999885 5788899999999998632 11
Q ss_pred hHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeecccccc
Q 004348 471 GRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETG 550 (759)
Q Consensus 471 ~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~ 550 (759)
........++++|++.++|++++.|++.. ..++++||.+++||+++++++.+++.+ ++ +++++.||+||++
T Consensus 197 ~~~~~~~~~~~~t~~~~vP~~l~~l~~~~-----~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~---~~l~~~YG~TE~~ 267 (452)
T PRK07445 197 KSGQELPPNPSDFFLSLVPTQLQRLLQLR-----PQWLAQFRTILLGGAPAWPSLLEQARQ-LQ---LRLAPTYGMTETA 267 (452)
T ss_pred cchhhhhhhcCceEEEehHHHHHHHHhhC-----hhhhhcceEEEECCccCCHHHHHHHHh-cC---CeEecCcchhhhc
Confidence 22233445789999999999999998632 125789999999999999999988765 34 7899999999998
Q ss_pred ceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeC
Q 004348 551 GFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTG 630 (759)
Q Consensus 551 ~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TG 630 (759)
..++...+.......+++|+|+++++++|+ .|+.|||+|+| |+++.||++++. ..+|||+||
T Consensus 268 ~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~--------~g~~Gel~v~g--~~~~~gY~~~~~--------~~~g~~~TG 329 (452)
T PRK07445 268 SQIATLKPDDFLAGNNSSGQVLPHAQITIP--------ANQTGNITIQA--QSLALGYYPQIL--------DSQGIFETD 329 (452)
T ss_pred ccccccCchhhccCCCcCCccCCCCeEEEc--------CCCcceEEEeC--CccchhhcCCcc--------CCCCEEECC
Confidence 654432222212345689999999999997 35689999999 899999998642 237899999
Q ss_pred Ceee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHH
Q 004348 631 DGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSL 691 (759)
Q Consensus 631 Dl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l 691 (759)
|+|+ +|+||+|.|||++|.+||+|.+|+|++.+++..++.++|+|+.+++.. + .++|
T Consensus 330 Dl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~~~-~---~~~l 405 (452)
T PRK07445 330 DLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDPSI-S---LEEL 405 (452)
T ss_pred CEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCCCC-C---HHHH
Confidence 9998 899999999999999999999999999999888899999999876532 2 5789
Q ss_pred HHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc
Q 004348 692 VLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 692 ~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~ 735 (759)
+++++++|+.|++|+.++++++||+|++||++|++|++++.+++
T Consensus 406 ~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 449 (452)
T PRK07445 406 KTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRL 449 (452)
T ss_pred HHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999988654
No 104
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=2.2e-58 Score=577.84 Aligned_cols=482 Identities=20% Similarity=0.229 Sum_probs=378.3
Q ss_pred HHHHHHhhcccccCC-CeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLG-DKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 201 ~~~~~l~~~~~~~~p-d~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
++.+.|+++++ ++| +++|+.+. .++++||+||+++++++|+.|++ |+++||+|+++++|++|+++++|||++
T Consensus 632 ~~~~~l~~~~~-~~~~~~~ai~~~-----~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~ 704 (1140)
T PRK06814 632 TLFEALIEAAK-IHGFKKLAVEDP-----VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQS 704 (1140)
T ss_pred CHHHHHHHHHH-HcCCCCeEeECC-----CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHH
Confidence 35667777777 565 67777642 15789999999999999999975 999999999999999999999999999
Q ss_pred hCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccc
Q 004348 280 IGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTK 359 (759)
Q Consensus 280 aGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~ 359 (759)
+|++++|+||.++.+++.+++++++++++|+++......+ ..+..+.+ .....++.+++... ...
T Consensus 705 ~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-------~~~~~~~~----~~~~~~i~~~~~~~----~~~ 769 (1140)
T PRK06814 705 AGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKAR-------LGPLIEAL----EFGIRIIYLEDVRA----QIG 769 (1140)
T ss_pred CCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhc-------chhHHHHh----ccCceEEEehHhhc----cCC
Confidence 9999999999999999999999999999999865321100 01111111 12223444432110 000
Q ss_pred cCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 360 WQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
....+.+......+..+.....++|+++|+|||||||.||||+++|+++ .+........++++++|++++.+|+.
T Consensus 770 ----~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~-~~~~~~~~~~~~~~~~d~~l~~~pl~ 844 (1140)
T PRK06814 770 ----LADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNL-LANRAQVAARIDFSPEDKVFNALPVF 844 (1140)
T ss_pred ----hHHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHH-HHHHHHHHHhhCCCCcCEEEEecchH
Confidence 0000111111111111111356899999999999999999999999995 44455556678899999999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..++...++.++.+|+++++.+.. .+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||
T Consensus 845 h~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~----~~~~~~~lr~v~~gg~ 917 (1140)
T PRK06814 845 HSFGLTGGLVLPLLSGVKVFLYPSP---LHYRIIPELIYDTNATILFGTDTFLNGYARYA----HPYDFRSLRYVFAGAE 917 (1140)
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCc---ccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc----ccccccceeEEEEcCC
Confidence 9998778889999999999998642 36677899999999999999999999987753 2346789999999999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEec
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKS 599 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g 599 (759)
++++++.+++.+.++ ++++|.||+||++...+...+. ..+.+++|+|++|+++++.|..+ .|+.|||+|+|
T Consensus 918 ~l~~~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~~~----~~~~Gel~v~g 988 (1140)
T PRK06814 918 KVKEETRQTWMEKFG---IRILEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPVPG----IDEGGRLFVRG 988 (1140)
T ss_pred cCCHHHHHHHHHHhC---CcEEeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeecCC----CCCceEEEEeC
Confidence 999999999999886 7899999999998765543221 24567899999999999987543 35689999999
Q ss_pred CCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEE
Q 004348 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVV 660 (759)
Q Consensus 600 ~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv 660 (759)
++++.||+++++..... ...+|||+|||+++ +|+||+|.|||++|.+|+.|.+++|+
T Consensus 989 --~~~~~gY~~~~~~~~~~--~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv 1064 (1140)
T PRK06814 989 --PNVMLGYLRAENPGVLE--PPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAV 1064 (1140)
T ss_pred --CCcchhhcCCCCCCccc--cCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEE
Confidence 89999999986432211 12478999999998 89999999999999999999999999
Q ss_pred eEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh-cCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc
Q 004348 661 GVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ-IGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 661 ~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~-Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~ 735 (759)
+++++..++.+++++.. . ..+ .++++++++++ +++|++|..|+++++||+|++||+||++|++++.+..
T Consensus 1065 ~~~~~~~g~~~~~~~~~-~--~~~---~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 1134 (1140)
T PRK06814 1065 SIPDARKGERIILLTTA-S--DAT---RAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAA 1134 (1140)
T ss_pred EcccCCCCceEEEEEcC-C--CcC---HHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhh
Confidence 99998888888877642 1 222 46788888865 9999999999999999999999999999999887653
No 105
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-57 Score=521.00 Aligned_cols=475 Identities=21% Similarity=0.247 Sum_probs=376.6
Q ss_pred EEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHH
Q 004348 218 VAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLA 297 (759)
Q Consensus 218 ~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~ 297 (759)
.|++.+ ++.+||.||.++++++|++|.++|+++||+|+++++|++++++++|||+++|++++|++|.++.+++.
T Consensus 3 ~~~~~~------~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~ 76 (509)
T PRK12406 3 ATIISG------DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIA 76 (509)
T ss_pred eEEEEC------CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHH
Confidence 466654 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcc----cccc-ccccCCCCccchhhhc
Q 004348 298 QRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA----MTRE-NTKWQDGRDIWWQDVV 372 (759)
Q Consensus 298 ~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~----~~~~-~~~~~~~~~~~~~~~~ 372 (759)
++++++++++++++..... .+.+ .. +....++....... .... ...........|++..
T Consensus 77 ~~l~~~~~~~i~~~~~~~~---------~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (509)
T PRK12406 77 YILEDSGARVLIAHADLLH---------GLAS---AL----PAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWL 140 (509)
T ss_pred HHHhccCCcEEEEccchhh---------hhhh---hh----hcccceeecccccccccccccccccccCCCCccCHHHHh
Confidence 9999999999998765321 1111 11 00011111111000 0000 0000111233444443
Q ss_pred CCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHH--HHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHH
Q 004348 373 PKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMV--HTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYG 450 (759)
Q Consensus 373 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~--~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~ 450 (759)
...+ +.....++++++|+|||||||.||||+++|..... .........+++.++++++...++.|..++.+. +.
T Consensus 141 ~~~~---~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~ 216 (509)
T PRK12406 141 AQQE---PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYG-LR 216 (509)
T ss_pred cccC---ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHH-HH
Confidence 2211 11234578999999999999999999998765321 112233456788999999999999998875444 55
Q ss_pred HhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHH
Q 004348 451 PMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFF 530 (759)
Q Consensus 451 ~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~ 530 (759)
++..|+++++.+. .+++.++++++++++|++.++|+++..|++.........+++++|.+++||+++++++++++.
T Consensus 217 ~~~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~ 292 (509)
T PRK12406 217 AGRLGGVLVLQPR----FDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMI 292 (509)
T ss_pred HHhhheEEEEccC----CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHH
Confidence 7889999988753 489999999999999999999999999987654333445789999999999999999999999
Q ss_pred HHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccc-ccc
Q 004348 531 NVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFR-TLY 609 (759)
Q Consensus 531 ~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~-GY~ 609 (759)
+.++ +.+++.||+||++.+++.... .....++++|+|++++.++|+|+++++++.|+.|||+++| ++++. ||+
T Consensus 293 ~~~~---~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~--~~~~~~~y~ 366 (509)
T PRK12406 293 EWWG---PVIYEYYGSTESGAVTFATSE-DALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRI--AGNPDFTYH 366 (509)
T ss_pred HHcC---CcEEeeccccccCceEecCcc-cccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEEC--Ccccccccc
Confidence 9886 679999999999976543322 1224567899999999999999999999999999999999 77765 999
Q ss_pred CChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeE
Q 004348 610 GDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQG 670 (759)
Q Consensus 610 ~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~ 670 (759)
++++.+...+ .+|||+|||+++ +|++|+|.|||++|.+||+|.+++|++.++...++.
T Consensus 367 ~~~~~~~~~~---~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 443 (509)
T PRK12406 367 NKPEKRAEID---RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEA 443 (509)
T ss_pred CCchhccccc---CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCce
Confidence 9988765542 378999999988 799999999999999999999999999988877888
Q ss_pred EEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcc
Q 004348 671 IYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 671 lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
++++|++.++...+ .++|++++++.|++|++|..++++++||+|++||++|+.|++.+...
T Consensus 444 ~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~ 504 (509)
T PRK12406 444 LMAVVEPQPGATLD---EADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWAN 504 (509)
T ss_pred eEEEEEECCCCCCC---HHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhh
Confidence 99999987654333 57899999999999999999999999999999999999999887643
No 106
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-58 Score=535.20 Aligned_cols=486 Identities=20% Similarity=0.200 Sum_probs=373.4
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR 279 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k 279 (759)
.++.++|+..++ .+|+.+++ ... .+..+.+||.||+++++++|++|+++|+++||+|+++++|++++++++|||++
T Consensus 21 ~~~~~~~~~~~~-~~~~~~~~-~~~--~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~ 96 (579)
T PRK09192 21 PTLVEALDYAAL-GEAGMNFY-DRR--GQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQY 96 (579)
T ss_pred hhHHHHHHHhhc-cCCceEEE-ecC--CCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHH
Confidence 378999999887 67755543 221 12247899999999999999999999999999999999999999999999999
Q ss_pred hCCeEEecCCCCC-------HHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcc
Q 004348 280 IGAVHSVVFAGFS-------SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA 352 (759)
Q Consensus 280 aGav~vpldp~~~-------~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~ 352 (759)
+|++++|+++.++ .+++.++++.++++++|+++... +.+.+.... .....++
T Consensus 97 ~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~---------~~~~~~~~~-----~~~~~~~------- 155 (579)
T PRK09192 97 AGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELL---------PWVNEATHG-----NPLLHVL------- 155 (579)
T ss_pred cCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHH---------HHHHHhhcc-----cccccee-------
Confidence 9999999987543 68999999999999999976531 222211111 0111111
Q ss_pred ccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHH-HhCCCCCcE
Q 004348 353 MTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKY-AFDYKPSDV 431 (759)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~-~~~l~~~d~ 431 (759)
.|.++..............+++++||+|||||||.||||+++|++++.+. ..... .+++.++|+
T Consensus 156 --------------~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~-~~~~~~~~~~~~~d~ 220 (579)
T PRK09192 156 --------------SHAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANL-RAISHDGLKVRPGDR 220 (579)
T ss_pred --------------ehhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHH-HHHHhhcccCCCCCe
Confidence 11111111111111223467899999999999999999999999965544 33444 788999999
Q ss_pred EEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc-ccccCCCCC
Q 004348 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE-YVTRYSRKS 510 (759)
Q Consensus 432 ~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~-~~~~~~l~s 510 (759)
+++..|+.|+.++...++.++..|+++++........++..+++++.++++|+++..|.++..+...... .....++++
T Consensus 221 ~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 300 (579)
T PRK09192 221 CVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSC 300 (579)
T ss_pred EEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhh
Confidence 9999999999997777888899999998765322223688999999999999887766666665543211 122356889
Q ss_pred eeEEEEeCCCCCHHHHHHHHHHhCCCC---ccEeeeeccccccceecccCCCCC--------------------------
Q 004348 511 LRVLGSVGEPINPSAWRWFFNVVGDSR---CPISDTWWQTETGGFMITPLPGAW-------------------------- 561 (759)
Q Consensus 511 Lr~v~~gGe~l~~~~~~~~~~~~g~~~---~~l~n~YG~TE~~~~~~~~~~~~~-------------------------- 561 (759)
+|.+++||++++++++++|.+.++..+ ..+++.||+||++...+.......
T Consensus 301 lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (579)
T PRK09192 301 WRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRR 380 (579)
T ss_pred hheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCcc
Confidence 999999999999999999998875211 358999999999865543211100
Q ss_pred CCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------
Q 004348 562 PQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------- 634 (759)
Q Consensus 562 ~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------- 634 (759)
.....++|+|++|++++|+|+++++++.|+.|||+|+| +++++|||++ +.+.+.+. .+|||+|||+|+
T Consensus 381 ~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g--~~~~~gY~~~-~~~~~~~~--~dgw~~TGDlg~~~~G~l~ 455 (579)
T PRK09192 381 VRTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRG--PSLMSGYFRD-EESQDVLA--ADGWLDTGDLGYLLDGYLY 455 (579)
T ss_pred ceeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecC--CchhhhhcCC-cccccccc--CCceeeccceeeEECCEEE
Confidence 01124789999999999999999999999999999999 8999999999 55555443 378999999987
Q ss_pred -----------ccEeeCHHHHHHHHhcCCccc--eEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcC-
Q 004348 635 -----------SGHRIGTAEVESALVSHPQCA--EAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIG- 700 (759)
Q Consensus 635 -----------~G~rI~~~eIE~~L~~~p~V~--ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp- 700 (759)
+|+||+|.|||++|.+||+|. +|+|++++++. ++.++++|+..++.. ...++|++++++.+.
T Consensus 456 ~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~---~~~~~l~~~~~~~l~~ 531 (579)
T PRK09192 456 ITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDE---ERRGQLIHALAALVRS 531 (579)
T ss_pred EEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCCh---HHHHHHHHHHHHHHHH
Confidence 899999999999999999998 89999998875 558888888765432 225677888888764
Q ss_pred CCccccEEEEeC--CCCCCCCCcccHHHHHHHHhcc
Q 004348 701 AFAAPDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 701 ~~~vP~~iv~v~--~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
.+++|..+++++ +||+|++||++|++|++++..-
T Consensus 532 ~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~ 567 (579)
T PRK09192 532 EFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSG 567 (579)
T ss_pred HhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcC
Confidence 588998888885 8999999999999999987643
No 107
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-57 Score=531.80 Aligned_cols=493 Identities=20% Similarity=0.221 Sum_probs=363.4
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCC---CCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEAND---PGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~---~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
+.++|++++. .+|+++|+++.+.. .+..+.+||+||.++++++|++|.++| ++||+|+|+++|++++++++|||+
T Consensus 3 ~~~~l~~~a~-~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 3 VPSLLRERAS-LQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred HHHHHHHHHh-cCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 5678888888 89999999975321 122478999999999999999999999 689999999999999999999999
Q ss_pred HhCCeEEecCC---CCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccc
Q 004348 279 RIGAVHSVVFA---GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTR 355 (759)
Q Consensus 279 kaGav~vpldp---~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 355 (759)
++|++++|+++ .++.+++.++|+++++++||+++... +.+.+..... .......++..+...
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~~~~---- 145 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVV---------DDVTEYVAPQ--PGQSAPPVIEVDLLD---- 145 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHH---------HHHHHHHhhc--ccccccceEeecccc----
Confidence 99999999997 55789999999999999999976532 1111111110 000111122111100
Q ss_pred cccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhC-----CCCCc
Q 004348 356 ENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFD-----YKPSD 430 (759)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~-----l~~~d 430 (759)
+. . ..........++++++|+|||||||.||||+++|++++.+........+. ...++
T Consensus 146 ------------~~----~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (578)
T PRK05850 146 ------------LD----S-PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDT 208 (578)
T ss_pred ------------cc----c-CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcc
Confidence 00 0 00001123457899999999999999999999999965543333322233 35578
Q ss_pred EEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHH-HHHHHhcCC-cccccCCC
Q 004348 431 VYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTL-VRSLMRDGN-EYVTRYSR 508 (759)
Q Consensus 431 ~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~-l~~l~~~~~-~~~~~~~l 508 (759)
++++..|+.|+.++++.++.+++.|+++++.+......++..+++++++++++++ .+|++ +..+..... ......++
T Consensus 209 ~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 287 (578)
T PRK05850 209 TVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDL 287 (578)
T ss_pred eEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcch
Confidence 9999999999999888899999999999998642222378999999999999866 45554 444433211 11223467
Q ss_pred CCeeEEEEeCCCCCHHHHHHHHHHhCC---CCccEeeeeccccccceecccCCCCC-----------------------C
Q 004348 509 KSLRVLGSVGEPINPSAWRWFFNVVGD---SRCPISDTWWQTETGGFMITPLPGAW-----------------------P 562 (759)
Q Consensus 509 ~sLr~v~~gGe~l~~~~~~~~~~~~g~---~~~~l~n~YG~TE~~~~~~~~~~~~~-----------------------~ 562 (759)
+++|.+++||++++++++++|.+.++. ++..+++.||+||++..+........ .
T Consensus 288 ~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 367 (578)
T PRK05850 288 GGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGG 367 (578)
T ss_pred hhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCC
Confidence 899999999999999999999988742 23478999999998754432211100 0
Q ss_pred CCCCCcCCCCCCceEEEECC-CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc---------cCCcEEEeCCe
Q 004348 563 QKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK---------PFPGYYFTGDG 632 (759)
Q Consensus 563 ~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~---------~~~g~y~TGDl 632 (759)
....++|.|. +.+++|+|+ ++++++.|+.|||+|+| ++++.|||++++.+.+.|.. ..+|||+|||+
T Consensus 368 ~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g--~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl 444 (578)
T PRK05850 368 TPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHG--DNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDL 444 (578)
T ss_pred ceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEec--CcccccccCChhhhHHHhhcccccccccCCCCCeeeccce
Confidence 0112346664 578999995 57899999999999999 89999999999999988742 12469999999
Q ss_pred ee------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHH---HHHHH
Q 004348 633 CS------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEE---LRKSL 691 (759)
Q Consensus 633 ~~------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~---l~~~l 691 (759)
|+ +|++|+|.|||++|.+||.+ +++|++++++ .++.++++|+++++...+++ ..+++
T Consensus 445 ~~~~~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l 522 (578)
T PRK05850 445 GFISEGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTV 522 (578)
T ss_pred eeEECCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcchhhhhhHHHH
Confidence 87 89999999999999999995 5888888887 67889999998866432221 23455
Q ss_pred HHHHHhhcCC--CccccEEEEeC--CCCCCCCCcccHHHHHHHHhcc
Q 004348 692 VLAVRKQIGA--FAAPDKIHWAP--GLPKTRSGKIMRRILRKIASRQ 734 (759)
Q Consensus 692 ~~~l~~~Lp~--~~vP~~iv~v~--~lP~T~~GKvdR~~L~~~~~~~ 734 (759)
++.+...++. ...|..+++++ +||+|++|||+|++|++.+...
T Consensus 523 ~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 523 KREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 6665555442 23576677775 8999999999999999998653
No 108
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-56 Score=515.61 Aligned_cols=488 Identities=21% Similarity=0.244 Sum_probs=374.8
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
+..+.|++.++ .+|+++|+.+. +..+||+||.++++++|.+|.+.|+++||+|+|+++|++++++++|||+++
T Consensus 19 ~~~~~~~~~~~-~~~~~~a~~~~------~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~ 91 (545)
T PRK08162 19 TPLSFLERAAE-VYPDRPAVIHG------DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMA 91 (545)
T ss_pred CHHHHHHHHHH-HCCCCeEEEEC------CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHh
Confidence 35677888888 89999999876 578999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++++|++|.++.+++.+++++++++++++++... ..+.+....+ +.. ..+.++..... ....
T Consensus 92 G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~---------~~~~~~~~~~----~~~-~~~~~~~~~~~---~~~~ 154 (545)
T PRK08162 92 GAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFA---------EVAREALALL----PGP-KPLVIDVDDPE---YPGG 154 (545)
T ss_pred CcEEeccccccChHHHHHHHHhCCCeEEEEccchh---------hHHHHHHhhC----CCC-ceEEEecCccc---cccC
Confidence 99999999999999999999999999999987642 2233322222 111 12222211100 0000
Q ss_pred CCCCccchhhhcCCCCCCCCc-cccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcc
Q 004348 361 QDGRDIWWQDVVPKYPTKCEV-EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCG 439 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~ 439 (759)
.......|.+.+......... ...+.+++++|+|||||||.||||+++|+++..+.... ...+++..++++++..|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~-~~~~~~~~~~~~l~~~pl~ 233 (545)
T PRK08162 155 RFIGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSN-ILAWGMPKHPVYLWTLPMF 233 (545)
T ss_pred CCcccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHH-HHhcCCCCCCeeEeccCcH
Confidence 001122344443332211111 12244679999999999999999999999855544333 4456788889999999999
Q ss_pred hhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 440 WITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 440 ~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
|..+..+.++.++ .|++.++... +++..+++.|+++++|++.++|++++.|++.... ....+.+++.++++|+
T Consensus 234 h~~~~~~~~~~~~-~~g~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~~~~~~~~~~~~g~ 306 (545)
T PRK08162 234 HCNGWCFPWTVAA-RAGTNVCLRK----VDPKLIFDLIREHGVTHYCGAPIVLSALINAPAE--WRAGIDHPVHAMVAGA 306 (545)
T ss_pred hhhhHHHHHHHHH-HccEEEEeCC----CCHHHHHHHHHHcCCeEEEechHHHHHHHhCccc--cccCCccceEEEECCC
Confidence 9888655544444 4555555432 4899999999999999999999999999876432 1223456777889999
Q ss_pred CCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCC-C--------CCCCCCCcCCCCCC-ceEEEECC-CCcccC
Q 004348 520 PINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPG-A--------WPQKPGSATFPFFG-VQPVIVDE-KGVEIE 588 (759)
Q Consensus 520 ~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~-~--------~~~~~~~iG~p~~g-~~~~IvD~-~g~~vp 588 (759)
++++++.+++.+. + +++++.||+||+++........ . ......+.|.+++. ..++|+|+ ++++++
T Consensus 307 ~~~~~~~~~~~~~-~---~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 382 (545)
T PRK08162 307 APPAAVIAKMEEI-G---FDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVP 382 (545)
T ss_pred CCCHHHHHHHHHh-C---CceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccC
Confidence 9999999988764 4 7899999999986543322110 0 01123456766653 35788895 788887
Q ss_pred C-C-ceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCHHHHHHH
Q 004348 589 G-E-CSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGTAEVESA 647 (759)
Q Consensus 589 ~-g-~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~~eIE~~ 647 (759)
. | +.|||+|+| +.++.||+++++.+...|. +|||+|||+++ +|+||+|.|||++
T Consensus 383 ~~g~~~Gel~v~g--~~~~~gY~~~~~~~~~~~~---~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~ 457 (545)
T PRK08162 383 ADGETIGEIMFRG--NIVMKGYLKNPKATEEAFA---GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDV 457 (545)
T ss_pred CCCCceeEEEEec--CcchhhhcCChhhhHHHhh---CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHH
Confidence 6 3 479999999 8899999999999988773 68999999987 8999999999999
Q ss_pred HhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHH
Q 004348 648 LVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRIL 727 (759)
Q Consensus 648 L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L 727 (759)
|.+||+|.+++|++.+++..++.++++|+++++...+ .++|+++++++||.|++|..+++ +++|+|++||++|+.|
T Consensus 458 l~~~~~v~~~~vv~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l 533 (545)
T PRK08162 458 LYRHPAVLVAAVVAKPDPKWGEVPCAFVELKDGASAT---EEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVL 533 (545)
T ss_pred HHhCCcccEEEEEeeeccccCceEEEEEEeCCCCCCC---HHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHH
Confidence 9999999999999998887788999999988765433 57899999999999999999875 6899999999999999
Q ss_pred HHHHhc
Q 004348 728 RKIASR 733 (759)
Q Consensus 728 ~~~~~~ 733 (759)
++.+..
T Consensus 534 ~~~~~~ 539 (545)
T PRK08162 534 REQAKS 539 (545)
T ss_pred HHHHhh
Confidence 988654
No 109
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.2e-57 Score=511.96 Aligned_cols=429 Identities=19% Similarity=0.162 Sum_probs=356.7
Q ss_pred HhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEE
Q 004348 206 LDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHS 285 (759)
Q Consensus 206 l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~v 285 (759)
.+++++ .+|+++|++.. ++.+||+||.++++++|..|++.|+++||+|+++++|++++++++|||+++|++++
T Consensus 9 ~~~~a~-~~~~~~a~~~~------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v 81 (458)
T PRK09029 9 WRHWAQ-VRPQAIALRLN------DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVL 81 (458)
T ss_pred HHHHHH-hCCCceeeecC------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEe
Confidence 345566 79999999865 67899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCc
Q 004348 286 VVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRD 365 (759)
Q Consensus 286 pldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 365 (759)
|+++.++.+++..++++++++++++++.... +. .+.... .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~-----------~~~~~~-~------------------ 121 (458)
T PRK09029 82 PLNPQLPQPLLEELLPSLTLDFALVLEGENT----------FS-----------ALTSLH-L------------------ 121 (458)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEEcCcccc----------hh-----------hccccc-c------------------
Confidence 9999999999999999999999998765321 00 000000 0
Q ss_pred cchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhh
Q 004348 366 IWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHS 445 (759)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~ 445 (759)
.. ..........++++++++|||||||.||||+++|++++.+ .......+++.++|+++...|+.|.+++
T Consensus 122 ---~~-----~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~-~~~~~~~~~~~~~~~~l~~~p~~h~~g~- 191 (458)
T PRK09029 122 ---QL-----VEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLAS-AEGVLSLMPFTAQDSWLLSLPLFHVSGQ- 191 (458)
T ss_pred ---cc-----ccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHH-HHHHhhcCCCCccceEEEecCcHhhhhh-
Confidence 00 0001112346788999999999999999999999996544 4445566889999999999999999885
Q ss_pred HHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHH
Q 004348 446 YVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSA 525 (759)
Q Consensus 446 ~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~ 525 (759)
..++.+|..|+++++.+. ..+++.+. ++|.+..+|+++..|+..... ..++|.+++||+++++.+
T Consensus 192 ~~~~~~l~~G~~v~~~~~-------~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~------~~~l~~i~~gG~~~~~~~ 256 (458)
T PRK09029 192 GIVWRWLYAGATLVVRDK-------QPLEQALA--GCTHASLVPTQLWRLLDNRSE------PLSLKAVLLGGAAIPVEL 256 (458)
T ss_pred HHHHHHHhCCceEEeCCh-------HHHHHHHh--hceeeecChHHHHHHHhcccc------CCcceEEEECCCCCCHHH
Confidence 456778999999998642 45777774 799999999999988876432 347999999999999999
Q ss_pred HHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCccc
Q 004348 526 WRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAF 605 (759)
Q Consensus 526 ~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~ 605 (759)
.+++.+. + +++++.||+||++...+.... ....++|+|++++.++|+| |||+|+| +.++
T Consensus 257 ~~~~~~~-g---~~~~~~YG~tE~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~-----------gel~v~g--~~~~ 315 (458)
T PRK09029 257 TEQAEQQ-G---IRCWCGYGLTEMASTVCAKRA----DGLAGVGSPLPGREVKLVD-----------GEIWLRG--ASLA 315 (458)
T ss_pred HHHHHHc-C---CcEeccccccccCcceeccCC----CCCCCCCCCCCCCEEEEeC-----------CEEEEec--Ccee
Confidence 9988764 5 789999999999865443221 1234699999999999986 8999999 8999
Q ss_pred ccccCChhhHHhhhcccCCcEEEeCCeee------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCC
Q 004348 606 RTLYGDHERYETTYFKPFPGYYFTGDGCS------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVK 667 (759)
Q Consensus 606 ~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~ 667 (759)
.||+++++.+... ..+|||+|||+|+ +|+||+|.|||++|.+||+|.+|+|++++++..
T Consensus 316 ~gY~~~~~~~~~~---~~~~~~~TGD~~~~~~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ 392 (458)
T PRK09029 316 LGYWRQGQLVPLV---NDEGWFATRDRGEWQNGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEF 392 (458)
T ss_pred eeeecCccccccc---cCCCccCCCCcEEEeCCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCccc
Confidence 9999998776432 2478999999987 899999999999999999999999999999888
Q ss_pred CeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhccc
Q 004348 668 GQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQL 735 (759)
Q Consensus 668 ~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~ 735 (759)
++.++++|+.+... + .++|+++++++||+|++|..+++++++|+|.+||++|+.|++++....
T Consensus 393 ~~~~~a~v~~~~~~--~---~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 393 GQRPVAVVESDSEA--A---VVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred CceEEEEEEcCccc--C---HHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhcc
Confidence 89999999876432 2 578999999999999999999999999999999999999999988643
No 110
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4.7e-56 Score=499.45 Aligned_cols=498 Identities=21% Similarity=0.297 Sum_probs=368.2
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~i 271 (759)
.|..-...+.+..++.+++. .+|+.+|+.+... +..+.+||+|+.+++.++|++|+++|+..||+|+|++.|++||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~--~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~ 84 (613)
T COG1022 8 AWEDVAEIHTLPKRLAERVK-DRPDGVALMYKEL--GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWA 84 (613)
T ss_pred cchhhhhcccHHHHHHHHhh-cCCcceeEeeecC--CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH
Confidence 34433444567788888888 8999889987652 56899999999999999999999999977999999999999999
Q ss_pred HHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEe----
Q 004348 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTY---- 347 (759)
Q Consensus 272 va~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~---- 347 (759)
++.+||+.+|++.||+.++.+++.++++|+++++++||+++... .+.+......+ +.+...+..
T Consensus 85 i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~--------~~~~~~~~~~~----~~~~~~~~~~~~~ 152 (613)
T COG1022 85 IADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQEL--------LDLVLPVLEDC----PKVVDLIVIIDLV 152 (613)
T ss_pred HHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHH--------HHHHHhhhccc----cchhhhhhhhhhh
Confidence 99999999999999999999999999999999999999987532 11121111111 000000000
Q ss_pred ccCccccccccccC---CCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHh
Q 004348 348 ENQSAMTRENTKWQ---DGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAF 424 (759)
Q Consensus 348 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~ 424 (759)
...... ....+. ......+ ............+..++|+|.|+|||||||.||||++||+|++.+ .......+
T Consensus 153 ~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~-v~~~~~~~ 227 (613)
T COG1022 153 REAVEA--KALVLEVFPDEGISLF--LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQ-VAGIDEVL 227 (613)
T ss_pred hhccch--hhccccccccccchhh--hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHH-HHHHHhhC
Confidence 000000 000000 0001111 111111122224578999999999999999999999999996555 55566667
Q ss_pred C-CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCC---
Q 004348 425 D-YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN--- 500 (759)
Q Consensus 425 ~-l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~--- 500 (759)
. +.++|++++++|++|++..+++....+..|+++... .++..+++.+.++++|++..+|.+|+.+-+.-.
T Consensus 228 ~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~------~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv 301 (613)
T COG1022 228 PPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK------EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKV 301 (613)
T ss_pred CCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec------CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHH
Confidence 5 899999999999999998766555555555555443 388999999999999999999999987732200
Q ss_pred --cccc----------------------------------------cCCC-CCeeEEEEeCCCCCHHHHHHHHHHhCCCC
Q 004348 501 --EYVT----------------------------------------RYSR-KSLRVLGSVGEPINPSAWRWFFNVVGDSR 537 (759)
Q Consensus 501 --~~~~----------------------------------------~~~l-~sLr~v~~gGe~l~~~~~~~~~~~~g~~~ 537 (759)
.... +..+ ..+|.+++||.+|++++..+++.. |
T Consensus 302 ~~~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-G--- 377 (613)
T COG1022 302 AKAPAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-G--- 377 (613)
T ss_pred HhcchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-C---
Confidence 0000 0011 479999999999999999888775 4
Q ss_pred ccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHh
Q 004348 538 CPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYET 617 (759)
Q Consensus 538 ~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~ 617 (759)
+++..+||+|||+..++...+.. ...+++|+|+|+++++|.|+ |||+|+| |.||+|||++|+.|.+
T Consensus 378 i~i~eGYGlTEts~~~~v~~~~~--~~~gtvG~p~p~~evKI~d~----------GEilVRG--~~Vm~GYyk~pe~Tae 443 (613)
T COG1022 378 IPILEGYGLTETSAVVSVNPPDR--FVLGTVGKPLPGIEVKIADD----------GEILVRG--PNVMKGYYKNPEATAE 443 (613)
T ss_pred CCeEEEecccccccceEEccccC--cccCCcCCcCCCceEEEccC----------ceEEEec--chhcchhcCChHHHhh
Confidence 99999999999998877665543 57889999999999999993 9999999 9999999999999999
Q ss_pred hhcccCCcEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEE
Q 004348 618 TYFKPFPGYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 677 (759)
Q Consensus 618 ~~~~~~~g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 677 (759)
.|.. +|||+|||+|. +|+.|.|..||+.+.++|-|.+++|++ .+ ...++|.|++
T Consensus 444 af~~--DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg-~~---k~~~~AlIvp 517 (613)
T COG1022 444 AFTE--DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVG-DD---KKFLVALIVP 517 (613)
T ss_pred hccc--cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEe-cC---CcceEEEEeC
Confidence 9976 99999999987 899999999999999999999999998 32 3458899998
Q ss_pred cCCCC------------Cc-------HHHHHHHHHHH---HhhcCCCccccEEEEeC-CCC-----CCCCCcccHHHHHH
Q 004348 678 VEGVP------------YS-------EELRKSLVLAV---RKQIGAFAAPDKIHWAP-GLP-----KTRSGKIMRRILRK 729 (759)
Q Consensus 678 ~~~~~------------~~-------~~l~~~l~~~l---~~~Lp~~~vP~~iv~v~-~lP-----~T~~GKvdR~~L~~ 729 (759)
..+.- .+ ..+.+.+...+ ..++..+..+..++.++ ++. +|+.-|+.|+.+.+
T Consensus 518 ~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~ 597 (613)
T COG1022 518 DFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILD 597 (613)
T ss_pred CHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHH
Confidence 64310 01 11222222222 22234455666666554 333 68999999999999
Q ss_pred HHhcccCCCC
Q 004348 730 IASRQLDELG 739 (759)
Q Consensus 730 ~~~~~~~~~~ 739 (759)
.+...++..+
T Consensus 598 ~~~~~i~~~y 607 (613)
T COG1022 598 RYKDEIEAVY 607 (613)
T ss_pred hhhhHHHHHh
Confidence 8887765543
No 111
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.7e-55 Score=487.90 Aligned_cols=384 Identities=16% Similarity=0.169 Sum_probs=330.7
Q ss_pred ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEE
Q 004348 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVI 309 (759)
Q Consensus 230 ~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~ii 309 (759)
++++||+||.++++++|+.|. +|+++|++|+|+++|++++++++||++++|++++|+++..+.+++..+++++++++++
T Consensus 6 ~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i 84 (414)
T PRK08308 6 DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLL 84 (414)
T ss_pred CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEE
Confidence 678999999999999999985 7899999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCc
Q 004348 310 TSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDP 389 (759)
Q Consensus 310 t~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 389 (759)
+++.... + .. .....++++
T Consensus 85 ~~~~~~~----------------------------~--~~-------------------------------~~~~~~~~~ 103 (414)
T PRK08308 85 YGESDFT----------------------------K--LE-------------------------------AVNYLAEEP 103 (414)
T ss_pred ecCcccc----------------------------c--cc-------------------------------CCCCCCCCc
Confidence 8653100 0 00 001346789
Q ss_pred EEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCC
Q 004348 390 LFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPD 469 (759)
Q Consensus 390 a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d 469 (759)
++|+|||||||.||||+++|++++ .........+++..+|+++...|+.|.+++...++.+|..|+++++.+. ++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~-~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~ 178 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEID-REIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN----KN 178 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHH-HHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC----CC
Confidence 999999999999999999999954 4455555668888999999999999999887889999999999999864 48
Q ss_pred hhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccc
Q 004348 470 SGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTET 549 (759)
Q Consensus 470 ~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~ 549 (759)
+..+++.++++++|++.++|+++..|.+.... ..+++.++++|++++++++++|.+. + .++++.||+||+
T Consensus 179 ~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~------~~~l~~~~~~G~~l~~~~~~~~~~~-~---~~~~~~YG~tE~ 248 (414)
T PRK08308 179 PKFALNILRNTPQHILYAVPLMLHILGRLLPG------TFQFHAVMTSGTPLPEAWFYKLRER-T---TYMMQQYGCSEA 248 (414)
T ss_pred HHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc------cccccEEEEccCCCCHHHHHHHHHh-C---ChhhhccCcccc
Confidence 89999999999999999999999999876431 1368899999999999999999886 2 689999999999
Q ss_pred cceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEe
Q 004348 550 GGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFT 629 (759)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~T 629 (759)
+.+..... ...++++|+|++++++++.++. |..|||++++ .++||+|
T Consensus 249 ~~~~~~~~----~~~~~~~G~p~~~~~~~~~~~~------~~~gel~v~~-----------------------~~~~~~T 295 (414)
T PRK08308 249 GCVSICPD----MKSHLDLGNPLPHVSVSAGSDE------NAPEEIVVKM-----------------------GDKEIFT 295 (414)
T ss_pred CCeeecCC----CCCCCccCccCCCeEEEEecCC------CCCceEEEEc-----------------------CCceEEC
Confidence 86543221 1345789999999999997643 4579999986 1579999
Q ss_pred CCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHH
Q 004348 630 GDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKS 690 (759)
Q Consensus 630 GDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~ 690 (759)
||+|+ +|+||+|.|||++|.+||+|.+|+|++++++..++.++++++.++... .++
T Consensus 296 GDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~ 370 (414)
T PRK08308 296 KDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHEEID-----PVQ 370 (414)
T ss_pred CceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCCCCC-----HHH
Confidence 99988 899999999999999999999999999999888899999998765432 478
Q ss_pred HHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHH
Q 004348 691 LVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILR 728 (759)
Q Consensus 691 l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~ 728 (759)
|+++++++|++|++|..++++++||+|++||++|+.|+
T Consensus 371 l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 371 LREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 89999999999999999999999999999999999654
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=6.9e-55 Score=490.33 Aligned_cols=416 Identities=22% Similarity=0.302 Sum_probs=341.8
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 234 TYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 234 TY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
||+||.++++++|+.|++.|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEE
Q 004348 314 VKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLL 393 (759)
Q Consensus 314 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~Ii 393 (759)
... +.+.. ..+... . .... ...........+++++|+
T Consensus 81 ~~~--~~~~~-----~~~~~~----------------~-------------------~~~~-~~~~~~~~~~~~~~~~i~ 117 (436)
T TIGR01923 81 LEE--KDFQA-----DSLDRI----------------E-------------------AAGR-YETSLSASFNMDQIATLM 117 (436)
T ss_pred ccc--cceee-----cchHhh----------------h-------------------hccc-ccccccccCCcCceEEEE
Confidence 321 00000 000000 0 0000 000111234578899999
Q ss_pred eccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHH
Q 004348 394 YTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRS 473 (759)
Q Consensus 394 yTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l 473 (759)
|||||||.||+|+++|+++. .........++++++|+++...++.|..++ ..++.++..|+++++.+. ...+
T Consensus 118 ~TSGtTG~PK~v~~s~~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~------~~~~ 189 (436)
T TIGR01923 118 FTSGTTGKPKAVPHTFRNHY-ASAVGSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDK------FNQL 189 (436)
T ss_pred eCCCCCCCCcEEEEehHHHH-HHHHHHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecch------HHHH
Confidence 99999999999999999954 445556667899999999999999998885 568899999999999753 2489
Q ss_pred HHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeecccccccee
Q 004348 474 WDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFM 553 (759)
Q Consensus 474 ~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~ 553 (759)
++.|+++++|++.++|+++..|++.... .+++|.+++|||++++++.+++.. ++ +++++.||+||++...
T Consensus 190 ~~~l~~~~~t~~~~~P~~l~~l~~~~~~------~~~l~~~~~~G~~~~~~~~~~~~~-~~---~~~~~~YG~tE~~~~~ 259 (436)
T TIGR01923 190 LEMIANERVTHISLVPTQLNRLLDEGGH------NENLRKILLGGSAIPAPLIEEAQQ-YG---LPIYLSYGMTETCSQV 259 (436)
T ss_pred HHHHHHhCCeEEEeHHHHHHHHHhCcCC------CCceEEEEECCCCCCHHHHHHHHH-hC---CceeeEecCCccchhc
Confidence 9999999999999999999999887432 268999999999999999998875 44 8899999999998755
Q ss_pred cccCCCCCCCCCCCcCCCCCCceEEE-ECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCe
Q 004348 554 ITPLPGAWPQKPGSATFPFFGVQPVI-VDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDG 632 (759)
Q Consensus 554 ~~~~~~~~~~~~~~iG~p~~g~~~~I-vD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl 632 (759)
+........ ...++|+|+++++++| .|+.+ +.|||+|+| +.+++||+++++.+...+ .+|||+|||+
T Consensus 260 ~~~~~~~~~-~~~~~G~~~~~~~~~i~~~~~~------~~Gel~v~~--~~~~~gy~~~~~~~~~~~---~~~~~~TGD~ 327 (436)
T TIGR01923 260 TTATPEMLH-ARPDVGRPLAGREIKIKVDNKE------GHGEIMVKG--ANLMKGYLYQGELTPAFE---QQGWFNTGDI 327 (436)
T ss_pred cCcCccccc-cccCCCccCCCcEEEEEeCCCC------CceEEEEEC--CccchhhCCChhhhhhhh---cCCCeeccce
Confidence 433222211 2234899999999999 44332 679999999 899999999877665432 3689999999
Q ss_pred ee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHH
Q 004348 633 CS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVL 693 (759)
Q Consensus 633 ~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~ 693 (759)
++ +|++|++.|||++|.++|.|.+++|++.++...+..++++|+++++.. .+++.+
T Consensus 328 ~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-----~~~l~~ 402 (436)
T TIGR01923 328 GELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESDIS-----QAKLIA 402 (436)
T ss_pred EEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCCCC-----HHHHHH
Confidence 88 899999999999999999999999999887766788999999876432 568889
Q ss_pred HHHhhcCCCccccEEEEeCCCCCCCCCcccHHHH
Q 004348 694 AVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRIL 727 (759)
Q Consensus 694 ~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L 727 (759)
+++++|+.|++|..|+++++||+|++||++|++|
T Consensus 403 ~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 403 YLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred HHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 9999999999999999999999999999999875
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-55 Score=507.42 Aligned_cols=479 Identities=19% Similarity=0.137 Sum_probs=364.3
Q ss_pred HHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhC
Q 004348 202 CYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIG 281 (759)
Q Consensus 202 ~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaG 281 (759)
+.+.+...+. ..|+.+|+...+ ..+.+||.||+++++++|++|.+.|+++||+|+|+++|++++++++|||+++|
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~----~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g 78 (545)
T PRK07768 4 FTEKMYANAR-TSPRGMVTGEPD----APVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRG 78 (545)
T ss_pred HHHHHHHHhh-CCCcceEEecCC----CceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 5666667777 789999997652 36789999999999999999999999999999999999999999999999999
Q ss_pred CeEEecCCCCCHHHH-------HHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc
Q 004348 282 AVHSVVFAGFSSDSL-------AQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT 354 (759)
Q Consensus 282 av~vpldp~~~~~~l-------~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~ 354 (759)
++++|+++..+.+++ ..+++.++++++++++.... ....+.. ... .+
T Consensus 79 ~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~~~~~--~~~-~~---------- 132 (545)
T PRK07768 79 ASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLA-------------AAPVLEE--KGI-RV---------- 132 (545)
T ss_pred ccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhh-------------hhhhhcc--cCC-ce----------
Confidence 999999998887654 45677789999998765321 0011100 000 01
Q ss_pred ccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCC-cEEE
Q 004348 355 RENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS-DVYW 433 (759)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~-d~~l 433 (759)
+.++++....+. ......++++++|+|||||||+||||+++|++++ .........+++.++ |+++
T Consensus 133 -----------~~~~~l~~~~~~--~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~-~~~~~~~~~~~~~~~~d~~~ 198 (545)
T PRK07768 133 -----------LTVADLLAADPI--DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLY-ANAEAMFVAAEFDVETDVMV 198 (545)
T ss_pred -----------eehhhhcccCCC--CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHH-HHHHHHHHhcCCCCCCceeE
Confidence 112222221111 1224467899999999999999999999999954 445555566788876 8999
Q ss_pred EecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcc--cccCCCCCe
Q 004348 434 CTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY--VTRYSRKSL 511 (759)
Q Consensus 434 ~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~--~~~~~l~sL 511 (759)
+.+|+.|+.++...++.++..|+++++........++..++++++++++|++.++|.++..|.+..... ....++++|
T Consensus 199 ~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 278 (545)
T PRK07768 199 SWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSL 278 (545)
T ss_pred EeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchhe
Confidence 999999999877677788999999998864333347888999999999999988888887766532110 113578899
Q ss_pred eEEEEeCCCCCHHHHHHHHHH---hCCCCccEeeeeccccccceecccCCCC------------------------CCCC
Q 004348 512 RVLGSVGEPINPSAWRWFFNV---VGDSRCPISDTWWQTETGGFMITPLPGA------------------------WPQK 564 (759)
Q Consensus 512 r~v~~gGe~l~~~~~~~~~~~---~g~~~~~l~n~YG~TE~~~~~~~~~~~~------------------------~~~~ 564 (759)
|.++++|+++++++.+++.+. +|.+...+++.||+||++..++....+. ....
T Consensus 279 r~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (545)
T PRK07768 279 RFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRR 358 (545)
T ss_pred eeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcce
Confidence 999999999999999999874 5533346999999999986543321110 0123
Q ss_pred CCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee----------
Q 004348 565 PGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS---------- 634 (759)
Q Consensus 565 ~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~---------- 634 (759)
.+++|+|+++++++|+|+++++++.|+.|||+++| +.+++||++++... ..+. .+|||+|||+++
T Consensus 359 ~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~-~~~~--~~g~~~TGDl~~~~~~g~l~~~ 433 (545)
T PRK07768 359 LATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRG--ESVTPGYLTMDGFI-PAQD--ADGWLDTGDLGYLTEEGEVVVC 433 (545)
T ss_pred EEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEcc--CcccccccCCCCCc-cccc--CCCeeeccceEEEecCCEEEEE
Confidence 45799999999999999999999999999999999 88999999865432 2222 367999999988
Q ss_pred ---------ccEeeCHHHHHHHHhcCCccceEEEEeEe--cCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCC-
Q 004348 635 ---------SGHRIGTAEVESALVSHPQCAEAAVVGVE--HEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAF- 702 (759)
Q Consensus 635 ---------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~--~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~- 702 (759)
+|++|+|.|||++|.+||+|.+++|+++. +...++.+++++...... ++....++.+++++.++.+
T Consensus 434 GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~l~~~~~~~l~~~~ 511 (545)
T PRK07768 434 GRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSREGFAVAVESNAFE--DPAEVRRIRHQVAHEVVAEV 511 (545)
T ss_pred ccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCceEEEEEEEecccc--cHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999998887765 333455565555544332 2222345666676665543
Q ss_pred -ccccEEEEeC--CCCCCCCCcccHHHHHHHHh
Q 004348 703 -AAPDKIHWAP--GLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 703 -~vP~~iv~v~--~lP~T~~GKvdR~~L~~~~~ 732 (759)
.+|..+.+++ +||+|++||++|+.|++.+.
T Consensus 512 ~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 512 GVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 5788888887 89999999999999998764
No 114
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-53 Score=470.50 Aligned_cols=516 Identities=23% Similarity=0.264 Sum_probs=393.2
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcC--CCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEAN--DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME 269 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~--~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e 269 (759)
.|+.+. -++++.|.+.+. ..|+.+++-+... ..+..+.+||.|..+++.+++..|+++|+++++.|+|+.-|++|
T Consensus 69 ~~~~~~--~T~~~~f~~~~~-~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pE 145 (691)
T KOG1256|consen 69 CPFDGP--LTLYEGFRRSVE-KSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPE 145 (691)
T ss_pred CCCCCc--ccHHHHhhcchh-ccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChh
Confidence 444433 379999999998 8999999987642 22557899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhh-cCCCccEEEEec
Q 004348 270 LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAK-SGISVDVCLTYE 348 (759)
Q Consensus 270 ~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~vi~~~ 348 (759)
|+++++||...|++.|||...++++.+.+|++++...++|++++.. ....++.... ..+.++.+|.++
T Consensus 146 Wiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k-----------~~~ll~~~~~~~~~~LK~iI~~~ 214 (691)
T KOG1256|consen 146 WIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKK-----------AEKLLEIKENDSLPSLKAIIQLD 214 (691)
T ss_pred hHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHH-----------HHHHHhhcccccCccceeEEEec
Confidence 9999999999999999999999999999999999999999986532 2222222211 126788888887
Q ss_pred cCccccccccccCCCCccchhhhcCCCCC-CCCc-cccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHH--HHHH-H
Q 004348 349 NQSAMTRENTKWQDGRDIWWQDVVPKYPT-KCEV-EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTAT--TFKY-A 423 (759)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~--~~~~-~ 423 (759)
...........-..-...+|+++...... .... .+..|+|+|.|+|||||||.|||||+||+|++..... .... .
T Consensus 215 ~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~ 294 (691)
T KOG1256|consen 215 EPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAE 294 (691)
T ss_pred CCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcc
Confidence 65321000011111124568887665422 2222 4778999999999999999999999999995543221 1111 1
Q ss_pred h--CCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCc
Q 004348 424 F--DYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNE 501 (759)
Q Consensus 424 ~--~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~ 501 (759)
. .....|++++++|++|++..+.+.+. +..|+.+.++.+ |+..+.+-|++.++|++.++|.+|..+-+....
T Consensus 295 ~~~~~~~~dv~lSyLPLAHi~er~~~~~~-~~~G~~IgF~~g-----D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~ 368 (691)
T KOG1256|consen 295 NAKATVGDDVYLSYLPLAHIFERVVELYT-FYIGAKIGFARG-----DILKLTDDLKELKPTVFPGVPRVLERIYEGIQK 368 (691)
T ss_pred cccccccCceEEEeCcHHHHHHHHHHHhH-hhcccEEEEecC-----ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHH
Confidence 1 12236999999999999988766554 589999999976 778888899999999999999999776221000
Q ss_pred ------------------------ccccCC-------------------CCCeeEEEEeCCCCCHHHHHHHHHHhCCCCc
Q 004348 502 ------------------------YVTRYS-------------------RKSLRVLGSVGEPINPSAWRWFFNVVGDSRC 538 (759)
Q Consensus 502 ------------------------~~~~~~-------------------l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~ 538 (759)
...... -..+|.+++|++|+++++.+.++..+| +
T Consensus 369 ~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g---~ 445 (691)
T KOG1256|consen 369 QVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG---C 445 (691)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC---c
Confidence 000000 146899999999999999999999987 9
Q ss_pred cEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECC-CCcccCCCceEEEEEecCCCcccccccCChhhHHh
Q 004348 539 PISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYET 617 (759)
Q Consensus 539 ~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~ 617 (759)
+|+++||+|||++..+...+++ ...+++|.|+|+++++++|. +.+--+.|..|||||+| +.++.|||+||++|.+
T Consensus 446 ~v~eGYGlTEts~g~~~~~~~d--~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG--~~Vf~GYyK~p~~T~e 521 (691)
T KOG1256|consen 446 RVLEGYGLTETSAGTTLTLPGD--NVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRG--PNVFMGYYKDPEKTAE 521 (691)
T ss_pred eeeecccccccCCceEeccCCC--CCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEec--chhceeccCChHHHhh
Confidence 9999999999996555444443 36789999999999999884 45555556689999999 9999999999999999
Q ss_pred hhcccCCcEEEeCCeee--------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEE
Q 004348 618 TYFKPFPGYYFTGDGCS--------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTL 677 (759)
Q Consensus 618 ~~~~~~~g~y~TGDl~~--------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 677 (759)
.+-. +||++|||+|+ .|+.|.|..||++..+.+-|.+.+|.+.. ....|+|.|++
T Consensus 522 ~ide--DGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s---~~~~LvaiVvp 596 (691)
T KOG1256|consen 522 AIDE--DGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDS---LRSFLVAIVVP 596 (691)
T ss_pred hhcc--ccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCc---chhcEEEEEec
Confidence 9865 89999999999 89999999999999999999999998653 34579999999
Q ss_pred cCCCCCc-----------H------HH----HHHHHHHH-HhhcCCCccccEEEEeC------CCCCCCCCcccHHHHHH
Q 004348 678 VEGVPYS-----------E------EL----RKSLVLAV-RKQIGAFAAPDKIHWAP------GLPKTRSGKIMRRILRK 729 (759)
Q Consensus 678 ~~~~~~~-----------~------~l----~~~l~~~l-~~~Lp~~~vP~~iv~v~------~lP~T~~GKvdR~~L~~ 729 (759)
+.....+ + .+ ..++.+.- .+.|..+..-..|.+.+ .==+||+-|+.|..|.+
T Consensus 597 d~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~ 676 (691)
T KOG1256|consen 597 DPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLK 676 (691)
T ss_pred ChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHH
Confidence 6542210 1 11 22222222 22355566666666633 23469999999999999
Q ss_pred HHhcccCCCC
Q 004348 730 IASRQLDELG 739 (759)
Q Consensus 730 ~~~~~~~~~~ 739 (759)
.|.+++++++
T Consensus 677 ~yk~~Id~mY 686 (691)
T KOG1256|consen 677 YYKKQIDELY 686 (691)
T ss_pred HHHHHHHHHH
Confidence 9999888765
No 115
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-51 Score=485.38 Aligned_cols=475 Identities=20% Similarity=0.226 Sum_probs=382.4
Q ss_pred CCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCCChhHHHHHHHHHhhChHHHHHHhhccccccccccccccccc
Q 004348 102 SGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVPSPQKYLEMYKRSVEDPAGFWADIASEFYWKEKWGQRVCSEN 181 (759)
Q Consensus 102 ~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~~~~~~~~ll~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~ 181 (759)
+.+++||+.+.+.++ ++...++|.+++|++.++.++.++|..++..+..+|+..+++++. +...+. . . ++
T Consensus 148 ~~~~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~l-l~~~e~--~-~--~~ 217 (642)
T COG1020 148 TPAAKLDLALAVVEG----GLRLSFDYARELFDAETIERELRHFLQLLAALADAPRTSLSALPL-LLPSER--E-V--WN 217 (642)
T ss_pred CcccccceEEEEEeC----ceEEEEEeecccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCC-CCHHHH--h-h--cc
Confidence 457899998886633 677899999999999999999999999999999999977777643 222222 1 0 11
Q ss_pred ccccCCCcccccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Q 004348 182 LDVRKGNVKIEWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVI 261 (759)
Q Consensus 182 ~~~~~~~~~~~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Va 261 (759)
. .+..-....+++..|.+++. ..|+++|+++. ..++||+||+.+++++|+.|.+.|++++++|+
T Consensus 218 -~--------~~~~~~~~~~i~~~f~~~a~-~~p~~~a~~~~------~~~lty~el~~~a~~la~~l~~~g~~~~~~V~ 281 (642)
T COG1020 218 -A--------LAAPIPLRLTIHLLFEEQAA-TTPDAVALVRG------GQQLTYAELDARANRLARLLISLGVGPGETVA 281 (642)
T ss_pred -c--------cccCCCccchHHHHHHHHHH-hCCCceeEecC------CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEE
Confidence 0 11111112368999999999 89999999976 68999999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCc
Q 004348 262 IYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISV 341 (759)
Q Consensus 262 i~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 341 (759)
++++++++++++++|++|+|++|+|+||.+|.+|+.++++++++++++++........ ..
T Consensus 282 i~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~--------------------~~ 341 (642)
T COG1020 282 ILADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV--------------------GL 341 (642)
T ss_pred EEcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccc--------------------cC
Confidence 9999999999999999999999999999999999999999999999999844321000 00
Q ss_pred cEEEEeccCccccccccccCCCCccchhhhcCCCCCCCC-ccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHH
Q 004348 342 DVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKYPTKCE-VEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF 420 (759)
Q Consensus 342 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~ 420 (759)
.. +.++.. ....+...+ .....+++++|++|||||||+||||+++|++ +.+...+.
T Consensus 342 ~~-~~~~~~---------------------~~~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~-~~~~~~~~ 398 (642)
T COG1020 342 PG-LALDDA---------------------LSEIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRA-LANLLNDA 398 (642)
T ss_pred Cc-cccccc---------------------cccCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHH-HHHHHHHH
Confidence 00 111100 000000001 1234568999999999999999999999999 55577777
Q ss_pred HHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCC
Q 004348 421 KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGN 500 (759)
Q Consensus 421 ~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~ 500 (759)
...+.+...|+++...+++|+.+ ++++|.++++|+++++.+..... ++..+.+.++++++|++..+|+++..++....
T Consensus 399 ~~~~~~~~~d~~l~~~s~~fD~~-~~~~f~~l~~G~~l~~~~~~~~~-~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~ 476 (642)
T COG1020 399 GARFGLDADDRVLALASLSFDAS-VFEIFGALLEGARLVLAPALLQV-DPAALLELLEAQGITVLLLVPLLLRLLLLAAL 476 (642)
T ss_pred HHhcCCCcccEEeecCCcccchh-HHHHHHHHhCCCEEEecCccccC-CHHHHHHHHHHcCCEEEEecHHHHHHHHhchh
Confidence 77799999999999999999998 79999999999999999876554 99999999999999999999999999987632
Q ss_pred cccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEE
Q 004348 501 EYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 580 (759)
Q Consensus 501 ~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~Iv 580 (759)
..........+|.+++|||.++.++...+...... ...+.|.||+||++................++|+|++|++++|+
T Consensus 477 ~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~-~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~il 555 (642)
T COG1020 477 APDLISPCERLRQLLSGGEALPLALVQRLLQLAAL-ARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYIL 555 (642)
T ss_pred hccccCCcccccEEEEcCCCCCHHHHHHHHHhccc-cceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEE
Confidence 21122233459999999999999999988887643 36899999999977654432211111115689999999999999
Q ss_pred CCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee-------------------ccEeeCH
Q 004348 581 DEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS-------------------SGHRIGT 641 (759)
Q Consensus 581 D~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~-------------------~G~rI~~ 641 (759)
|+.++++|.|+.|||+|.| .++++||+++|+.+...|+.. .+|+|||++| +|+||++
T Consensus 556 d~~~~~~p~gv~gel~i~g--~~~a~gy~~~p~lt~~~f~~~--~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel 631 (642)
T COG1020 556 DQGLRPLPLGVPGELYIAG--LGLALGYLNRPDLTAERFIAL--RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIEL 631 (642)
T ss_pred CCCCCcCCCCCCeeeEECC--cchhhhhcCChhhhHHHhhhc--cCccCCCeeeECCCCeEEEeccccceeEeceEecCc
Confidence 9999999999999999999 999999999999999999864 5999999998 8999999
Q ss_pred HHHHHHHhcCC
Q 004348 642 AEVESALVSHP 652 (759)
Q Consensus 642 ~eIE~~L~~~p 652 (759)
+|||+++.++|
T Consensus 632 ~eie~~l~~~~ 642 (642)
T COG1020 632 GEIEAALAEQP 642 (642)
T ss_pred HHHHHHHhcCC
Confidence 99999999886
No 116
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=4.6e-51 Score=456.52 Aligned_cols=391 Identities=28% Similarity=0.433 Sum_probs=300.4
Q ss_pred HhhcccccCCCeEEEEE-EcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeE
Q 004348 206 LDRNIEAGLGDKVAIYW-EANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVH 284 (759)
Q Consensus 206 l~~~~~~~~pd~~Al~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~ 284 (759)
|+++++ ++||++|+++ . .+.+||+||+++++++|..|+++|+++||+|+|+++|++++++++|||+++|+++
T Consensus 1 f~~~a~-~~pd~~a~~~~~------~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~ 73 (417)
T PF00501_consen 1 FERQAQ-RYPDRIALIDDE------GRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIP 73 (417)
T ss_dssp HHHHHH-HSTTSEEEEETT------TEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EE
T ss_pred ChhHHh-hCCCceEEEECC------CEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccc
Confidence 577888 8999999998 3 8999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCC
Q 004348 285 SVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGR 364 (759)
Q Consensus 285 vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~ 364 (759)
+|++|.++.+++.++++.+++++||+ .+... -.. +........ .......++.++..... ...
T Consensus 74 v~l~~~~~~~~~~~~l~~~~~~~ii~-~~~~d------~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~ 136 (417)
T PF00501_consen 74 VPLDPSLSEDELRHILRQSGPKVIIT-SEAVD------SEP-LKKLKSIFK-QEDPSSSIIILDRDDLP--------KKE 136 (417)
T ss_dssp EEEETTSSHHHHHHHHHHHTESEEEE-CHHHS------CHH-HHHHHHHHT-TSTTTEEEEEESHSSCT--------TCH
T ss_pred cccccccccccccccccccceeEEEE-ecccc------ccc-cccchhhhc-ccccccccccccccccc--------ccc
Confidence 99999999999999999999999998 20000 011 111111110 00123334444432210 000
Q ss_pred ccchhhhcCCCCCCCCccc-cCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHH-HHHHhCCCCCcEEEEecCcchhc
Q 004348 365 DIWWQDVVPKYPTKCEVEW-VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT-FKYAFDYKPSDVYWCTADCGWIT 442 (759)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~-~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~-~~~~~~l~~~d~~l~~~~l~~~~ 442 (759)
.+ .......... .. ..++++++|+|||||||.||+|+++|++++...... +...++++ |++++.+|++|..
T Consensus 137 ~~-~~~~~~~~~~----~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~ 209 (417)
T PF00501_consen 137 AL-KSASLSDEPQ----SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIF 209 (417)
T ss_dssp HH-HHHHHCHCSH----STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHH
T ss_pred cc-cccccccccc----cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccc
Confidence 00 0000000000 00 057899999999999999999999999865443331 12223344 6999999999999
Q ss_pred hhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcc--cccCCCCCeeEEEEeCCC
Q 004348 443 GHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY--VTRYSRKSLRVLGSVGEP 520 (759)
Q Consensus 443 g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~--~~~~~l~sLr~v~~gGe~ 520 (759)
+++..++.+|..|+++++.+.... .+++.+++.|+++++|++.++|+++..|++..... ....++++||.+++||++
T Consensus 210 g~~~~~~~~l~~G~~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~ 288 (417)
T PF00501_consen 210 GLISALLAALFSGATLVLPSPFDL-FDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEP 288 (417)
T ss_dssp HHHHHHHHHHHCTSEEEEESSHHH-HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST
T ss_pred cccccccccccccccccccccccc-cccccchhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 976899999999999999976432 23577899999999999999999999998742111 123478899999999999
Q ss_pred CCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCC-CcccCCCceEEEEEec
Q 004348 521 INPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEK-GVEIEGECSGYLCIKS 599 (759)
Q Consensus 521 l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~-g~~vp~g~~GEL~I~g 599 (759)
+++++++++.+.++. .++++.||+||++..++.........+.+++|+|++|++++|+|++ +++++.|+.|||+|+|
T Consensus 289 l~~~~~~~~~~~~~~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~ 366 (417)
T PF00501_consen 289 LPPDLLRRLRKAFGN--APIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRG 366 (417)
T ss_dssp -CHHHHHHHHHHHTT--SEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEES
T ss_pred CChhhcccccccccc--ccceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccC
Confidence 999999999999983 5899999999999887643211112356789999999999999997 9999999999999999
Q ss_pred CCCcccccccCChhhHHhhhcccCCcEEEeCCeee
Q 004348 600 SWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS 634 (759)
Q Consensus 600 ~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~ 634 (759)
|.++.||+++|+.+.+.|.. +|||+|||+|+
T Consensus 367 --~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~g~ 397 (417)
T PF00501_consen 367 --PNVFSGYYNDPELTAEAFID--DGWYRTGDLGR 397 (417)
T ss_dssp --TTSBSEETTBHHHHHHHEET--TSEEEEEEEEE
T ss_pred --Cccceeeecccccccccccc--ccceecceEEE
Confidence 89999999999999998764 57999999998
No 117
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.3e-49 Score=420.17 Aligned_cols=481 Identities=20% Similarity=0.243 Sum_probs=365.4
Q ss_pred CcceeeeHHHHHHHHHHHHHHHHHcCCCCCCE-EEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCe
Q 004348 228 GVDATLTYSQLLQQVCQLANYLKDIGVKKGDA-VIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPK 306 (759)
Q Consensus 228 ~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~-Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~ 306 (759)
++-..+||.|+.+++.++|+.|.++|++++++ |+|+++.+.+|+++++||++.+...|.+...+..+.|.+-|+.++++
T Consensus 85 g~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~ 164 (678)
T KOG1180|consen 85 GDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETEST 164 (678)
T ss_pred cceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccce
Confidence 34678999999999999999999999997776 99999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccc-ccccc-c--CCCCccchhhhcCCCCCC-CCc
Q 004348 307 VVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMT-RENTK-W--QDGRDIWWQDVVPKYPTK-CEV 381 (759)
Q Consensus 307 ~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~-~~~ 381 (759)
.|||+.+.. +.+...+..+ ..++++|.++..+... .+... . .+-..+++++.+.-.... .++
T Consensus 165 ~i~T~~~LL---------~kl~~~l~~~----~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~ 231 (678)
T KOG1180|consen 165 AIFTDSELL---------PKLKAPLKQA----KTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPP 231 (678)
T ss_pred EEEeCHHHH---------HHHHHHHhcc----CceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCC
Confidence 999987642 3444444444 6888888887432100 00111 0 112334566665443322 334
Q ss_pred cccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 382 EWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 382 ~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.+..|+|+|+|||||||||.||||+++|.|+++...........+.+.|+++.++|+.|+.-+.+++ .++..|+++-..
T Consensus 232 ~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~-~~ft~G~~iGY~ 310 (678)
T KOG1180|consen 232 HPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAEL-VCFTWGGRIGYS 310 (678)
T ss_pred CCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHH-HHHhhCCEeecC
Confidence 4458899999999999999999999999996665555555556889999999999999999888775 468889887664
Q ss_pred cCCCCCCChh-----HHHHHHHHcCCcEEEehHHHHHHHHhcCCccc----------------------c----------
Q 004348 462 EGAPTYPDSG-----RSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV----------------------T---------- 504 (759)
Q Consensus 462 ~~~~~~~d~~-----~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~----------------------~---------- 504 (759)
+..... |.. ..---+...|+|+|..+|.++..+.+.-.... .
T Consensus 311 S~~TLt-dts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld 389 (678)
T KOG1180|consen 311 SPLTLT-DTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLD 389 (678)
T ss_pred Ccceec-ccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHH
Confidence 322111 111 01112346799999999999877632210000 0
Q ss_pred --------cCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCce
Q 004348 505 --------RYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQ 576 (759)
Q Consensus 505 --------~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~ 576 (759)
..--..||.+++||.||+++..+.+.-.+. +++..+||.||++...+...+.+ ...+.+|.|++-++
T Consensus 390 ~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C---~Pv~qGYGLTEtca~~tv~e~~d--~~~g~vG~pl~c~e 464 (678)
T KOG1180|consen 390 ALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFC---CPVLQGYGLTETCAAATVLEPED--FSTGRVGAPLPCCE 464 (678)
T ss_pred HHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc---ccccccccccchhcccEecChhh--cccccccCCccceE
Confidence 000146999999999999999999988886 79999999999987665544433 45678999999999
Q ss_pred EEEEC-C------CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCc--EEEeCCeee-------------
Q 004348 577 PVIVD-E------KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPG--YYFTGDGCS------------- 634 (759)
Q Consensus 577 ~~IvD-~------~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g--~y~TGDl~~------------- 634 (759)
++++| + .++| | .|||+|+| +++..|||+++|+|.+.|.. .+| ||+|||+|+
T Consensus 465 iKLvdw~EgGY~~~~~P-P---rGEI~i~G--~~vt~gY~kn~ekT~e~ft~-~~G~~WF~TGDIGe~~pdG~LkIIDRK 537 (678)
T KOG1180|consen 465 IKLVDWEEGGYFAKNKP-P---RGEILIGG--PNVTMGYYKNEEKTKEDFTV-EDGQRWFRTGDIGEFHPDGCLKIIDRK 537 (678)
T ss_pred EEEEEhhhcCccCCCCC-C---CceEEecC--CccChhhhCChhhhhhhcee-cCCcEEEeccccceecCCCcEEEeech
Confidence 99998 2 2344 2 59999999 99999999999999999987 566 999999998
Q ss_pred -------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCC----------CC--------cHHH--
Q 004348 635 -------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGV----------PY--------SEEL-- 687 (759)
Q Consensus 635 -------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~----------~~--------~~~l-- 687 (759)
+|+-|+++-||++++..|-|...+|.+.. ....++++||++++. .. +..+
T Consensus 538 KdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~---~~s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~ 614 (678)
T KOG1180|consen 538 KDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADS---NKSKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVK 614 (678)
T ss_pred hhhhhhcccceeehHHHHHHHhcCcchhheEEeccc---ccceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHH
Confidence 89999999999999999999999998654 345799999997541 11 1112
Q ss_pred --HHHHHHHH-HhhcCCCccccEEEEeCCCCCC-------CCCcccHHHHHHHHhcccCCCC
Q 004348 688 --RKSLVLAV-RKQIGAFAAPDKIHWAPGLPKT-------RSGKIMRRILRKIASRQLDELG 739 (759)
Q Consensus 688 --~~~l~~~l-~~~Lp~~~vP~~iv~v~~lP~T-------~~GKvdR~~L~~~~~~~~~~~~ 739 (759)
.++|.++- .++|..+.+|..|++.++ |-| ..-|+.|+.++..+..++++++
T Consensus 615 ~v~k~L~~~ak~~~L~~iEip~~I~l~~e-~WTPenGlvT~A~KLKRk~I~~~~k~ei~~~Y 675 (678)
T KOG1180|consen 615 AVLKELIEAAKSQKLERIEIPAKIVLSPE-PWTPENGLVTAALKLKRKEILAAYKKEIDRLY 675 (678)
T ss_pred HHHHHHHHHHHhcccccccccceeEecCC-CcCCCccccHHHHHhhHHHHHHHHHHHHHHHh
Confidence 23333333 455999999999998865 444 4459999999999988877654
No 118
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-48 Score=413.82 Aligned_cols=486 Identities=22% Similarity=0.286 Sum_probs=374.9
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHh
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARI 280 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ka 280 (759)
+++++|.++++ ++|+++|+++. ++.+++||+|++++++|+|+.|...|++.||.||++|+|.+|++...|+.+|+
T Consensus 78 ti~~~F~~~vr-r~p~k~aii~~----~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKl 152 (649)
T KOG1179|consen 78 TIAELFLSQVR-RQPDKPAIIYE----GPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKL 152 (649)
T ss_pred cHHHHHHHHHH-hCCCccEEEEe----CCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhh
Confidence 68899999999 99999999999 34689999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcccccccccc
Q 004348 281 GAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKW 360 (759)
Q Consensus 281 Gav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 360 (759)
|++...|+++...+.|.+-|.-++++++|+..+.. ..+.++++.+.. ..-++...+...
T Consensus 153 Gv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~---------~~~~e~~~~l~~---~~i~~~~~~~~~--------- 211 (649)
T KOG1179|consen 153 GVITAFINTNLRGEPLLHSITVSGARALVVGPELL---------NALEEILPLLIK---NGIHVFSLGPTS--------- 211 (649)
T ss_pred CceeeeeccccccchhhhhhhhcCceEEEECHHHH---------HHHHhcchhhhh---ccceEEecCCCC---------
Confidence 99999999999999999999999999999987643 333333322211 111122221111
Q ss_pred CCCCccchhhhcCCCCCCC----CccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEec
Q 004348 361 QDGRDIWWQDVVPKYPTKC----EVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTA 436 (759)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~ 436 (759)
......++...++..+... ........++++.||||||||.||..+++|.-++ .....+-..++++++|+++..+
T Consensus 212 ~~~g~~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~-~~a~g~~~~~g~~~~DvvY~~l 290 (649)
T KOG1179|consen 212 VPDGIESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYL-QGAAGFYYVFGMTADDVVYTTL 290 (649)
T ss_pred CCchHHHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHH-HHHHHHHHHhCCCccceEEEcc
Confidence 0111223333333333222 1234556789999999999999999999999854 4444466779999999999999
Q ss_pred CcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEE
Q 004348 437 DCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGS 516 (759)
Q Consensus 437 ~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~ 516 (759)
|+.|.++.+..+.++|..|+|+|+-.. +++..+|+-..+|++|++.-.--+.+.|++.+.... ..-..+|..+
T Consensus 291 PLYHsaa~ilGi~~~l~~GaT~VlrkK----FSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~--er~HkVRla~- 363 (649)
T KOG1179|consen 291 PLYHSAAGILGIGGCLLHGATVVLRKK----FSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPE--ERQHKVRLAY- 363 (649)
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEecc----cchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChh--hcCceEEEEe-
Confidence 999999999999999999999999643 699999999999999999999999999999876432 2346778776
Q ss_pred eCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCC------CCCCceEEEEC---------
Q 004348 517 VGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATF------PFFGVQPVIVD--------- 581 (759)
Q Consensus 517 gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~------p~~g~~~~IvD--------- 581 (759)
|..|-++.|+.|.++||. .+|.+.||+||.....+ +..+ +-|.+|+ -+.-+++-=+|
T Consensus 364 -GNGLR~diW~~Fv~RFg~--~~IgE~YgaTEgn~~~~-N~d~----~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd 435 (649)
T KOG1179|consen 364 -GNGLRPDIWQQFVKRFGI--IKIGEFYGATEGNSNLV-NYDG----RVGACGFMSRLLKLLYPFRLIKVDPETGEPIRD 435 (649)
T ss_pred -cCCCCchHHHHHHHHcCC--CeEEEEeccccCcceee-eecC----ccccccchhhhhhhccceEEEEecCCCCceeec
Confidence 888999999999999995 67999999999876443 2221 1222222 22223332233
Q ss_pred CCC--cccCCCceEEEEEecCCCc---ccccccCChhhHHhh----hcccCCcEEEeCCeee------------------
Q 004348 582 EKG--VEIEGECSGYLCIKSSWPG---AFRTLYGDHERYETT----YFKPFPGYYFTGDGCS------------------ 634 (759)
Q Consensus 582 ~~g--~~vp~g~~GEL~I~g~~~~---v~~GY~~~~e~~~~~----~~~~~~g~y~TGDl~~------------------ 634 (759)
++| .+|++|++|.|+-+=.... -+.||.+..+.+.++ .|.++|-||.|||+-.
T Consensus 436 ~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFR 515 (649)
T KOG1179|consen 436 SQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFR 515 (649)
T ss_pred CCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCcee
Confidence 333 3578999997653211022 289999976555444 4666677999999854
Q ss_pred -ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCC-eEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeC
Q 004348 635 -SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKG-QGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP 712 (759)
Q Consensus 635 -~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~-~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~ 712 (759)
.|++|+..|||++|....+++|+.|.|+.-+..+ ..=.|-|+.++..+.+ .+.+-+++++.||+|++|..+.+.+
T Consensus 516 WKGENVsTtEVe~~l~~~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d---~~~l~~~l~~~LP~YA~P~FlRl~~ 592 (649)
T KOG1179|consen 516 WKGENVSTTEVEDVLSALDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKD---LEKLYQHLRENLPSYARPRFLRLQD 592 (649)
T ss_pred ecCCcccHHHHHHHHhhhccccceeEEEEecCCccCccceEEEEecCcccch---HHHHHHHHHhhCccccchHHHHHHh
Confidence 8999999999999999999999999999766432 2223555566655443 7889999999999999999999999
Q ss_pred CCCCCCCCcccHHHHHHHH
Q 004348 713 GLPKTRSGKIMRRILRKIA 731 (759)
Q Consensus 713 ~lP~T~~GKvdR~~L~~~~ 731 (759)
++++|.+=|..+..|.+.-
T Consensus 593 ~i~~TgTFKl~K~~L~~eg 611 (649)
T KOG1179|consen 593 EIEKTGTFKLQKTELQKEG 611 (649)
T ss_pred hhhcccchhhHHHHHHHcc
Confidence 9999999999999998763
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=8.2e-47 Score=420.73 Aligned_cols=378 Identities=24% Similarity=0.279 Sum_probs=309.5
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeC
Q 004348 234 TYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 234 TY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~ 312 (759)
||.||.++++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999987
Q ss_pred CcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchhhhcCCC-CCCCCccccCCCCcEE
Q 004348 313 AVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQDVVPKY-PTKCEVEWVDAEDPLF 391 (759)
Q Consensus 313 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~a~ 391 (759)
........ ....++...... ....... ..........++++++
T Consensus 81 ~~~~~~~~-------------------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~ 124 (408)
T TIGR01733 81 ALASRLAG-------------------LVLPIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAY 124 (408)
T ss_pred chhhhccc-------------------cCCceEEechhh-----------------hhhcccccccccccCCCCCCCcEE
Confidence 64321100 000111111100 0000000 0000111145789999
Q ss_pred EEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChh
Q 004348 392 LLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSG 471 (759)
Q Consensus 392 IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~ 471 (759)
|+|||||||.||+|+++|++++ .........+++.++|++++..|++|..++ +.++.++..|+++++.+..... .+.
T Consensus 125 i~~TSGTtG~pK~v~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~-~~~ 201 (408)
T TIGR01733 125 VIYTSGSTGRPKGVVVTHRSLV-NLLAWLARRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEER-DAA 201 (408)
T ss_pred EEEcCCCCCCCCEEEeccHHHH-HHHHHHHHhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhcc-CHH
Confidence 9999999999999999999954 445555567889999999999999999884 6789999999999998765332 578
Q ss_pred HHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccc
Q 004348 472 RSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGG 551 (759)
Q Consensus 472 ~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~ 551 (759)
.+.++++++++|.+.++|++++.|++... ..+++||.+++||++++++++++|.+.++ ++.+++.||+||++.
T Consensus 202 ~~~~~~~~~~~t~l~~~p~~~~~l~~~~~-----~~~~~l~~v~~~g~~~~~~~~~~~~~~~~--~~~i~~~YG~tE~g~ 274 (408)
T TIGR01733 202 LLAALIAEHPVTVLNLTPSLLALLAAALP-----PALASLRLVILGGEALTPALVDRWRARGP--GARLINLYGPTETTV 274 (408)
T ss_pred HHHHHHHHcCceEEEeCHHHHHHHHHhhh-----hcccCceEEEEeCccCCHHHHHHHHHhCC--CcEEEecccCCceEE
Confidence 99999999999999999999999988753 36789999999999999999999999987 488999999999987
Q ss_pred eeccc-CCCCCCC--CCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc----cCC
Q 004348 552 FMITP-LPGAWPQ--KPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK----PFP 624 (759)
Q Consensus 552 ~~~~~-~~~~~~~--~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~----~~~ 624 (759)
.+... ....... ++.++|+|++++.++|+|+++++++.|+.|||+|+| +.++.||+++++.+.+.|.. ..+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~~~~~~~~ 352 (408)
T TIGR01733 275 WSTATLVDADDAPRESPVPIGRPLANTRLYVLDDDLRPVPVGVVGELYIGG--PGVARGYLNRPELTAERFVPDPFAGGD 352 (408)
T ss_pred EEEEEEcCccccCCccccccCcccCCceEEEECCCCCCCCCCCceEEEecC--ccccccccCChhhhhcceeeCCCCCCC
Confidence 66422 1111111 267899999999999999999999999999999999 89999999999988877643 223
Q ss_pred c--EEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEE
Q 004348 625 G--YYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAV 659 (759)
Q Consensus 625 g--~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~V 659 (759)
| ||+|||+++ +|++|+|.|||++|..||.|.+|+|
T Consensus 353 ~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 353 GARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred CceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 4 999999988 8999999999999999999999875
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.3e-43 Score=384.36 Aligned_cols=306 Identities=22% Similarity=0.255 Sum_probs=254.3
Q ss_pred cCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecC
Q 004348 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (759)
Q Consensus 384 ~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~ 463 (759)
..++|+++|+|||||||.||||+++|+++..+ ....... +...++++...|++|..++ ..++.+++.|+++++++.
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~-~~~~~~~--~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTAS-ADATHDR--LGGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHH-HHHHHhc--cCCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCc
Confidence 34689999999999999999999999995443 3333332 3345788999999999985 567889999999988543
Q ss_pred CCCCCChhHHHHHHHHcC--CcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEe
Q 004348 464 APTYPDSGRSWDIVDKYK--VTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (759)
Q Consensus 464 ~~~~~d~~~l~~~i~~~~--vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~ 541 (759)
... +++..+++.+++++ +++...+|+++..++.... ...+++++|.+++||+++++++++++.+ ++ ++++
T Consensus 108 ~~~-~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~---~~~~~~~l~~i~~gG~~l~~~~~~~~~~-~~---~~v~ 179 (358)
T PRK07824 108 SAG-FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA---ATAALAELDAVLVGGGPAPAPVLDAAAA-AG---INVV 179 (358)
T ss_pred CCC-cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc---ccCCcccceEEEECCCCCCHHHHHHHHh-cC---CcEE
Confidence 333 48999999999998 5667778988877766532 2246789999999999999999998876 34 8899
Q ss_pred eeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc
Q 004348 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK 621 (759)
Q Consensus 542 n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~ 621 (759)
+.||+||++..+. ..|+|++|++++|.| |||+++| +.++.||+++++.. .|.
T Consensus 180 ~~YG~TE~~~~~~------------~~G~~~~g~~v~i~~-----------Gei~v~g--~~~~~gY~~~~~~~--~~~- 231 (358)
T PRK07824 180 RTYGMSETSGGCV------------YDGVPLDGVRVRVED-----------GRIALGG--PTLAKGYRNPVDPD--PFA- 231 (358)
T ss_pred ecccCCccCCCcC------------cCceeCCCCEEEecC-----------CEEEEec--CccccccCCCcccc--ccc-
Confidence 9999999875321 258899999999843 8999999 89999999988643 222
Q ss_pred cCCcEEEeCCeee------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCC
Q 004348 622 PFPGYYFTGDGCS------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY 683 (759)
Q Consensus 622 ~~~g~y~TGDl~~------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~ 683 (759)
.+|||+|||+++ +|++|+|.|||++|.+||+|.+|+|++.+++..++.++++|+.+.+...
T Consensus 232 -~~g~~~TGDl~~~~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~ 310 (358)
T PRK07824 232 -EPGWFRTDDLGALDDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAP 310 (358)
T ss_pred -CCCceecccEEEEeCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCc
Confidence 367999999887 8999999999999999999999999999988888999999987765433
Q ss_pred cHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhc
Q 004348 684 SEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 684 ~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~ 733 (759)
. .++|+++++++|+.|++|..|+++++||+|++||+||++|++.+.+
T Consensus 311 ~---~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 311 T---LEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred C---HHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 3 6789999999999999999999999999999999999999998753
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=8.2e-42 Score=417.38 Aligned_cols=486 Identities=15% Similarity=0.063 Sum_probs=344.6
Q ss_pred ccCCCccccHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHH
Q 004348 192 EWFKGGITNICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELP 271 (759)
Q Consensus 192 ~wf~~~~~n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~i 271 (759)
+|..-...+++.++|++.++ ++|+++|+.+.... ++.+.+||+|+.++++++|.+|+++|+++||+|+|+++|++||+
T Consensus 419 ~~~~~~~~~Tl~dll~~~a~-~~pd~~al~~~~~~-g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewv 496 (1452)
T PTZ00297 419 EYNPLAGVRSLGEMWERSVT-RHSTFRCLGQTSES-GESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIV 496 (1452)
T ss_pred cCCCcccCCCHHHHHHHHHH-HCCCCeEEEEeccC-CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH
Confidence 45444556689999999998 89999999743111 22478999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCc
Q 004348 272 IAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (759)
Q Consensus 272 va~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~ 351 (759)
++.+||+++|++.||+++ +.+++.++++++++++||++.... ..+.+ .. ...++++|+++...
T Consensus 497 ia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l---------~kl~~---i~---~~~Lr~IIv~d~~~ 559 (1452)
T PTZ00297 497 ILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSV---------AAILT---CR---SRKLETVVYTHSFY 559 (1452)
T ss_pred HHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHH---------HHHHh---hc---ccCCcEEEEECCCc
Confidence 999999999999999975 467899999999999999975431 11111 11 13678888875321
Q ss_pred cccccccccC-CCCccchhhhcCCCCC--CCCccccCCCCcEEEEe---ccCCCCCCcEEEEccchHHHHHHHHHHHH--
Q 004348 352 AMTRENTKWQ-DGRDIWWQDVVPKYPT--KCEVEWVDAEDPLFLLY---TSGSTGKPKGVLHTTGGYMVHTATTFKYA-- 423 (759)
Q Consensus 352 ~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~Iiy---TSGSTG~PKgV~~th~~~l~~~~~~~~~~-- 423 (759)
.......... ......|++++..... .......+++|++.|+| ||||||.||||++||+|++.+........
T Consensus 560 ~~~~~~~~~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~ 639 (1452)
T PTZ00297 560 DEDDHAVARDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVL 639 (1452)
T ss_pred ccccccccccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccc
Confidence 0000000000 1123457777654321 11122347889999996 99999999999999999665544332211
Q ss_pred hCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccc
Q 004348 424 FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV 503 (759)
Q Consensus 424 ~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~ 503 (759)
....++|++++++|++|+++.+ ..+.++..|+++.. ++++.+++.|+++++|++.++|.++..+........
T Consensus 640 ~~~~~~D~~Ls~LPLaHI~er~-~~~~~l~~G~~I~~-------~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~ 711 (1452)
T PTZ00297 640 PSSFKKHLMVHFTPFAMLFNRV-FVLGLFAHGSAVAT-------VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRAN 711 (1452)
T ss_pred cCCCCCCEEEEechHHHHHHHH-HHHHHHHcCCEEEe-------CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHh
Confidence 2456789999999999998854 45677899999863 378899999999999999999999986643210000
Q ss_pred c------------------------cCC---------------C-CCeeEEEEeC--CCCCHHHHHHHHHHhCCCCccEe
Q 004348 504 T------------------------RYS---------------R-KSLRVLGSVG--EPINPSAWRWFFNVVGDSRCPIS 541 (759)
Q Consensus 504 ~------------------------~~~---------------l-~sLr~v~~gG--e~l~~~~~~~~~~~~g~~~~~l~ 541 (759)
. +.. + ..+|.+++|| ++++..+.. .+++.
T Consensus 712 ~~~~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~---------~i~i~ 782 (1452)
T PTZ00297 712 ERYSAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE---------HISVC 782 (1452)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC---------CceEE
Confidence 0 000 0 4688898887 355544322 26788
Q ss_pred eeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECC--CCcccCCCceEEEEEecCCCcccccccCChhhHHhhh
Q 004348 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE--KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTY 619 (759)
Q Consensus 542 n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~--~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~ 619 (759)
..||.||+. +.+.++. .. ..|.|+||++++|.|. .+.. + ..|||++++ ++||+.|.+.+
T Consensus 783 ~g~glTE~~---~~~~~~~--~~--~~G~PlpgvEvKI~~~~E~~~~--~-~~GEIlvr~---------~kdpe~T~e~~ 843 (1452)
T PTZ00297 783 YVPCLREVF---FLPSEGV--FC--VDGTPAPSLQVDLEPFDEPSDG--A-GIGQLVLAK---------KGEPRRTLPIA 843 (1452)
T ss_pred EecceEEee---eecCCCC--cc--cCCeecCceEEEEcccccccCC--C-CCCeEEEEE---------CCChHHHHHhh
Confidence 899999953 2222222 12 2399999999999864 2221 1 259999965 48999998742
Q ss_pred cccCCcEEEeCCeee-----------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCC------
Q 004348 620 FKPFPGYYFTGDGCS-----------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP------ 682 (759)
Q Consensus 620 ~~~~~g~y~TGDl~~-----------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~------ 682 (759)
+||+..|.+-. +|+.|.|..||+.+.++|.|.+++|++.... .++|.|+++...-
T Consensus 844 ----~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k----~lvALVvpd~e~l~~~wa~ 915 (1452)
T PTZ00297 844 ----AQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR----PIIAIVSPNRDTVEFEWRQ 915 (1452)
T ss_pred ----CcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----ceEEEEEeCHHHHHHHHHH
Confidence 57887777653 9999999999999999999999999976432 3899998863110
Q ss_pred --------------CcHHHHH----HHHHH---HH--hhcCCCccccEEEEeC-CC-----CCCCCCcccHHHHHHHHhc
Q 004348 683 --------------YSEELRK----SLVLA---VR--KQIGAFAAPDKIHWAP-GL-----PKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 683 --------------~~~~l~~----~l~~~---l~--~~Lp~~~vP~~iv~v~-~l-----P~T~~GKvdR~~L~~~~~~ 733 (759)
..+++.+ .+++. +. ..+..+.+++.|++++ +| -+||+.|+.|+.+.+.|..
T Consensus 916 ~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~ 995 (1452)
T PTZ00297 916 SHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSS 995 (1452)
T ss_pred HcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHH
Confidence 0122211 23333 22 2267788998877764 45 4799999999999999998
Q ss_pred ccCCCCC
Q 004348 734 QLDELGD 740 (759)
Q Consensus 734 ~~~~~~~ 740 (759)
+++++++
T Consensus 996 ~Ie~LY~ 1002 (1452)
T PTZ00297 996 VIERFYS 1002 (1452)
T ss_pred HHHHHhc
Confidence 8877654
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2.1e-34 Score=315.80 Aligned_cols=271 Identities=21% Similarity=0.272 Sum_probs=209.9
Q ss_pred CCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCC--CcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCC
Q 004348 387 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKP--SDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 464 (759)
Q Consensus 387 ~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~--~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~ 464 (759)
++.++|+|||||||.||||+++|+++. +........+++.. .|++++.+|++|..++.+.++.++..|+++++.+.
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~-~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~- 172 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALL-SEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA- 172 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHH-HHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC-
Confidence 558999999999999999999999954 44444555566644 46899999999998877788889999999998753
Q ss_pred CCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeee
Q 004348 465 PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTW 544 (759)
Q Consensus 465 ~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~Y 544 (759)
+++..+++.++.+ |++.++|++++.|.+.. .+++++|. ++||+++++++++++.+. +. .++++.|
T Consensus 173 ---~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~------~~l~slr~-i~gGa~l~~~l~~~~~~~-g~--~~v~~~Y 237 (386)
T TIGR02372 173 ---APASGIMRHARPG--DLIVGTPFIWEQLADLD------YRLPGVVG-VSSGAPSTAATWRCLLAA-GL--ARLLEVY 237 (386)
T ss_pred ---CChHHHHHhhccC--CEEEECcHHHHHHHhhC------cCCCccee-EecCCCCCHHHHHHHHHh-cc--cchhhee
Confidence 4778888887653 89999999999998753 24677886 678999999999999875 42 4689999
Q ss_pred ccccccceecccCCCCCCCCCCCcCCCCCCceEEEECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCC
Q 004348 545 WQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFP 624 (759)
Q Consensus 545 G~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~ 624 (759)
|+||++++.+.. .+...|+|++++++.+ | ++.. .| +++
T Consensus 238 G~TEt~~i~~~~-------~~~~~~~~~p~~~~~~-~-~~~~-----------~g--~~~-------------------- 275 (386)
T TIGR02372 238 GATETGGIGLRE-------APDDPFRLLPDLACFA-D-TLSS-----------AG--LAR-------------------- 275 (386)
T ss_pred cccccccccccc-------CCCCCcccCCCccccC-C-CccC-----------CC--ccc--------------------
Confidence 999998654321 1234577888877654 2 2211 02 111
Q ss_pred cEEEeCCeee-------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcH
Q 004348 625 GYYFTGDGCS-------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSE 685 (759)
Q Consensus 625 g~y~TGDl~~-------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~ 685 (759)
|++|||+++ +|++|+|.|||++|.+||+|.+|+|+. .++.+.|+|+++++... +
T Consensus 276 -~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~-~ 348 (386)
T TIGR02372 276 -RLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADE-A 348 (386)
T ss_pred -eeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCCh-H
Confidence 233444433 899999999999999999999999852 35689999998865432 3
Q ss_pred HHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCccc
Q 004348 686 ELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 723 (759)
Q Consensus 686 ~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvd 723 (759)
.+.++|+++++++||+|++|..|+++++||+|++||++
T Consensus 349 ~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 349 ELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 35678999999999999999999999999999999985
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.1e-32 Score=308.80 Aligned_cols=309 Identities=17% Similarity=0.178 Sum_probs=226.9
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHH--HHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
+.+++++++|||||||.||+|.++|.++..+.. ......++++++|+++...++++..+.....+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 456789999999999999999999998543322 122234688999999887776654443344567788999998775
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEee
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD 542 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n 542 (759)
.. +++.+++.|+++++|++.++|+++..|++............+||.+++|||++++++.+++.+.+| +++++
T Consensus 153 ~~----~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g---~~v~~ 225 (422)
T TIGR02155 153 GG----QTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG---MKATD 225 (422)
T ss_pred CC----CHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC---CceEe
Confidence 42 678999999999999999999999998865321111112358999999999999999999999997 78999
Q ss_pred eeccccccce-ecccCCCCCCCCCCCcCCCCC--CceEEEEC-CCCcccCCCceEEEEEecCCCcccccccCChhhHHhh
Q 004348 543 TWWQTETGGF-MITPLPGAWPQKPGSATFPFF--GVQPVIVD-EKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETT 618 (759)
Q Consensus 543 ~YG~TE~~~~-~~~~~~~~~~~~~~~iG~p~~--g~~~~IvD-~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~ 618 (759)
.||+||+++. +...+.. ...|.++. ++.++|+| +++++++.|+.|||++++.. ...
T Consensus 226 ~YG~tE~~~~~~~~~~~~------~~~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~--------------~~~ 285 (422)
T TIGR02155 226 IYGLSEVIGPGVAMECVE------TQDGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLT--------------KEA 285 (422)
T ss_pred cccchhhcCCceeecccc------cCCCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCC--------------ccc
Confidence 9999998532 2211110 11233433 56778999 48999999999999999821 111
Q ss_pred hcccCCcEEEeCCeee-------------------------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEE
Q 004348 619 YFKPFPGYYFTGDGCS-------------------------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYA 673 (759)
Q Consensus 619 ~~~~~~g~y~TGDl~~-------------------------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva 673 (759)
+ ..+||+|||+++ +|.+|+|.|||.+|.+||+|...+++.+......+.+++
T Consensus 286 ~---p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~ 362 (422)
T TIGR02155 286 L---PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTL 362 (422)
T ss_pred c---ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEE
Confidence 1 146999999875 799999999999999999998555555655544567888
Q ss_pred EEEEcCCCC------CcHHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHH
Q 004348 674 FVTLVEGVP------YSEELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRR 725 (759)
Q Consensus 674 ~Vv~~~~~~------~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~ 725 (759)
+|+..++.. ..+.+.++|++++++.++.++. -.|+.+++||+|+ ||+.|.
T Consensus 363 ~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 363 KVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 887764431 1123467899999999887642 2233346999988 999763
No 124
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.4e-33 Score=322.24 Aligned_cols=489 Identities=18% Similarity=0.198 Sum_probs=327.8
Q ss_pred HHHHHHhhcccccCCCeEEEEEEcC--CCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 201 ICYNCLDRNIEAGLGDKVAIYWEAN--DPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 201 ~~~~~l~~~~~~~~pd~~Al~~~~~--~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
+.+..+.+.+. ..|+..+..+-.. ..+.-..+||++.+..++.+|+.|...|..+|+.|+++|..+.++++..++++
T Consensus 37 ~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 37 TLEDSFRRELA-EAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred chhhHHHHHHh-hcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 35556666666 6777766654321 22445789999999999999999999999999999999999999999999999
Q ss_pred HhCCeEEecCCCCC----HHHHHHHH---HhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCc
Q 004348 279 RIGAVHSVVFAGFS----SDSLAQRI---MDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQS 351 (759)
Q Consensus 279 kaGav~vpldp~~~----~~~l~~il---~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~ 351 (759)
++|..++++||.+| ++++..+. ......++ ...++.+....... +... +..
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~-------------~~l~i~~~~~~~~~---~~~s-v~~----- 173 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIV-------------RRLNIIDILLNSLF---PKLS-VET----- 173 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceeh-------------hhhhhHHHHhhccc---cccc-hhh-----
Confidence 99999999999999 33222221 11111110 01111111111110 0000 000
Q ss_pred cccccccccCCCCccchhhhcCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcE
Q 004348 352 AMTRENTKWQDGRDIWWQDVVPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDV 431 (759)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~ 431 (759)
+ .-.+. .+............-++..+++.||||+||.||||.-+|.. +.+...|+...|.....++
T Consensus 174 -----------~-~~~f~-~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~s-l~~~fdw~~~~f~~t~s~~ 239 (1032)
T KOG1178|consen 174 -----------I-ADSFQ-MVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFS-LANAFDWMFTTFPPTGSDR 239 (1032)
T ss_pred -----------c-cchhh-hhhccCCCcceeeecccccceEeecccccccccccchhHHH-HHhhhhhccccCCcCccch
Confidence 0 00000 01111122222344567799999999999999999999999 6677888888888888887
Q ss_pred EEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcc----cc---
Q 004348 432 YWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY----VT--- 504 (759)
Q Consensus 432 ~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~----~~--- 504 (759)
+-....++++.. +.....+++..+..++++.......+..+.+.+++|+++.++.+|++.+.++...... .+
T Consensus 240 ~~~~~~~~~~d~-i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~ 318 (1032)
T KOG1178|consen 240 FTFKTSVYFDDT-IQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFS 318 (1032)
T ss_pred hhhhheeecccc-hHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhh
Confidence 644444545443 4455555555555445444333334789999999999999999999988877654431 00
Q ss_pred ----cCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCC--CC-----CCcCCCC-
Q 004348 505 ----RYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQ--KP-----GSATFPF- 572 (759)
Q Consensus 505 ----~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~--~~-----~~iG~p~- 572 (759)
....+.|+...++||+....++..+...+.. .-...-|+.|+..+............ .. .+...-+
T Consensus 319 ~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~--~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~ 396 (1032)
T KOG1178|consen 319 LSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAE--IFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSII 396 (1032)
T ss_pred cccccccchhheeeeecCCccchhhhhhhhhcccc--eeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhcc
Confidence 1123579999999999999999877666542 33444588888776554321111000 00 0000001
Q ss_pred -CCceEEEECCCCcccCCCceEEEEEecCC--CcccccccCChhhHHhhhcc---cCCcEEEeCCeee------------
Q 004348 573 -FGVQPVIVDEKGVEIEGECSGYLCIKSSW--PGAFRTLYGDHERYETTYFK---PFPGYYFTGDGCS------------ 634 (759)
Q Consensus 573 -~g~~~~IvD~~g~~vp~g~~GEL~I~g~~--~~v~~GY~~~~e~~~~~~~~---~~~g~y~TGDl~~------------ 634 (759)
..+.+++....+.+.++++.+.....+-+ ..+..| +..++.+..++.. ..+.+|+|||.|+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR 475 (1032)
T KOG1178|consen 397 GSLTVLESLYRAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGR 475 (1032)
T ss_pred CCCcceeeeeccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhcccccccceeecCCCEEEEEe
Confidence 11334555555666655544443333210 223444 4556665555431 2244999999997
Q ss_pred -------ccEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccE
Q 004348 635 -------SGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDK 707 (759)
Q Consensus 635 -------~G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~ 707 (759)
||+||+++||++++..||.|.++.+..+.+..-++.+++||+....... .+...|+.+++++|+.||+|..
T Consensus 476 ~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~--~~~~~i~~~l~~~La~y~vPs~ 553 (1032)
T KOG1178|consen 476 ADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKS--VLIRDIRNYLKKELASYMLPSL 553 (1032)
T ss_pred ccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCc--hhHHHHHHhhcccccceecceE
Confidence 9999999999999999999999999999998889999999999876553 3478899999999999999999
Q ss_pred EEEeCCCCCCCCCcccHHHHHHHHh
Q 004348 708 IHWAPGLPKTRSGKIMRRILRKIAS 732 (759)
Q Consensus 708 iv~v~~lP~T~~GKvdR~~L~~~~~ 732 (759)
+|.++++|+|++||||+++|.+...
T Consensus 554 ~V~l~~vPl~~~GKvDkkaL~~~~s 578 (1032)
T KOG1178|consen 554 VVPLAKVPLNPNGKVDKKALLEYNS 578 (1032)
T ss_pred EEEhhhCCcCCCCCcChhhhhhhhh
Confidence 9999999999999999999998443
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.95 E-value=1.7e-25 Score=251.23 Aligned_cols=310 Identities=16% Similarity=0.116 Sum_probs=201.5
Q ss_pred cCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH--HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK--YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 384 ~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~--~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.+.++++.|.|||||||+||+|.+||.++......... ...+++++|+++...++++..+.....++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 34678899999999999999999999985433222211 2248999999999999888766444446677888886543
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEe
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~ 541 (759)
. .....+++|+++++|.+..+|+.+..|++............+||.+++|||++++++.+++.+.+| ++++
T Consensus 163 ~------~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g---~~v~ 233 (445)
T TIGR03335 163 G------KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWG---CEVY 233 (445)
T ss_pred C------chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC---CcEE
Confidence 2 224568999999999999999988777654321111112468999999999999999999999887 8999
Q ss_pred eeeccccccceecccCCCCCCCCCCCcCCCC--CCceEEEECCC-CcccCCCceEEEEEecCCCcccccccCChhhHHhh
Q 004348 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPF--FGVQPVIVDEK-GVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETT 618 (759)
Q Consensus 542 n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~--~g~~~~IvD~~-g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~ 618 (759)
|.||+||++.... +.. ..|..+ +.+.++|+|++ ++++|.|+.|||+++.-+ . ...+....
T Consensus 234 ~~YG~TE~~~~~~--c~~-------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~----~----~~~r~~~P 296 (445)
T TIGR03335 234 NTYGSTEGTMCGE--CQA-------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLL----K----PGERCGSL 296 (445)
T ss_pred ecCChhhhhheEE--ecC-------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecC----C----CCccCCce
Confidence 9999999863221 110 123333 45779999986 567999999999999821 1 00000011
Q ss_pred hcccCCcEEEeCCeee----------------------------ccEeeCHHHHHHHHhcC---Cccce-EEEEeEecCC
Q 004348 619 YFKPFPGYYFTGDGCS----------------------------SGHRIGTAEVESALVSH---PQCAE-AAVVGVEHEV 666 (759)
Q Consensus 619 ~~~~~~g~y~TGDl~~----------------------------~G~rI~~~eIE~~L~~~---p~V~e-a~Vv~~~~~~ 666 (759)
++ -|+|||+++ +|.+|.|.+||++|.++ +++.. ..++...+..
T Consensus 297 li-----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~ 371 (445)
T TIGR03335 297 LI-----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEE 371 (445)
T ss_pred EE-----EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCC
Confidence 11 277777655 89999999999999995 55543 2233222222
Q ss_pred CCeEEEEEEEEcCCCCC-cHHHHHHHHHH----H---HhhcCCCccccEEEEeC--CCCCCC-CCcccH
Q 004348 667 KGQGIYAFVTLVEGVPY-SEELRKSLVLA----V---RKQIGAFAAPDKIHWAP--GLPKTR-SGKIMR 724 (759)
Q Consensus 667 ~~~~lva~Vv~~~~~~~-~~~l~~~l~~~----l---~~~Lp~~~vP~~iv~v~--~lP~T~-~GKvdR 724 (759)
....+..-|...+.... .+++.+++.+. + +..+-...+...+.+++ .||+++ .||..|
T Consensus 372 ~~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 372 GEITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CCceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 23345555655443321 12333344433 1 11111222333444444 689984 688765
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.94 E-value=2e-25 Score=227.19 Aligned_cols=223 Identities=17% Similarity=0.128 Sum_probs=163.0
Q ss_pred hhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEE
Q 004348 207 DRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHS 285 (759)
Q Consensus 207 ~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~v 285 (759)
+.+++ .+|+++|+++.++..+..+++||+||.++++++|+.|++ +|+++||+|+|+++|++++++++|||+++|++++
T Consensus 3 ~~~~~-~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 3 SPLLA-ADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhh-hCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 34455 799999998753221135679999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCc
Q 004348 286 VVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRD 365 (759)
Q Consensus 286 pldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~ 365 (759)
|++ +++++++|++++.... + . . + +.++.+............. ....
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~---------~----~-~----~--~~~~~~~~~~~~~~~~~~~-~~~~ 127 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAA---------A----A-G----S--GEVVALSLDPLGRRVAGEL-PPGV 127 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhh---------c----c-c----C--CceEEEeccccccCCCCCC-CCcc
Confidence 995 7899999998765321 0 0 0 1 2223221100000000000 1122
Q ss_pred cchhhhcCCCCCCCCcc-ccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCCcEEEEecCcchhchh
Q 004348 366 IWWQDVVPKYPTKCEVE-WVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPSDVYWCTADCGWITGH 444 (759)
Q Consensus 366 ~~~~~~~~~~~~~~~~~-~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~d~~l~~~~l~~~~g~ 444 (759)
..|.+.+.......... ...++|++.|+||||+ +|++++.+. ...+++++|+++ .+|++|..|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~-----~~~~l~~~D~~l-~~Pl~H~~gl 192 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA-----RAAGLPPGDRVL-VLAWTDLEDF 192 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH-----hhcCCCCCCeEE-ecCCCchHHH
Confidence 45555554322222222 4567999999999985 666645443 457899999999 9999999998
Q ss_pred hHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCc
Q 004348 445 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (759)
Q Consensus 445 ~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT 483 (759)
...++.+|..|+++++++ .+++++++++|+++|||
T Consensus 193 ~~~~~~~l~~G~t~v~~~----rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 193 LATLLAPLAAGGSLVLVT----HPDPARLDQIAETERVT 227 (227)
T ss_pred HHHHHHHhccCceEEEec----CCCHHHHHHHHHhhcCC
Confidence 788999999999999984 36999999999999997
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.94 E-value=1e-23 Score=237.81 Aligned_cols=497 Identities=15% Similarity=0.132 Sum_probs=331.4
Q ss_pred cHHHHHHhhcccccCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCChHHHHHHHHHH
Q 004348 200 NICYNCLDRNIEAGLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDI-GVKKGDAVIIYLPMLMELPIAMLACA 278 (759)
Q Consensus 200 n~~~~~l~~~~~~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-Gv~~gd~Vai~~~~s~e~iva~LA~~ 278 (759)
-++.++|+-+++ ++||.+|+...+.++.+..++||++|..+|.++|.+|... -+++||.|+++.++++|++++++||+
T Consensus 770 ~~ile~Lq~R~a-~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cl 848 (1363)
T KOG3628|consen 770 LTILEILQWRAA-KTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACL 848 (1363)
T ss_pred HHHHHHHHHHhh-cCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHH
Confidence 378899988888 8999999999887777789999999999999999999866 48999999999999999999999999
Q ss_pred HhCCeEEecCCCCC------HHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCcc
Q 004348 279 RIGAVHSVVFAGFS------SDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSA 352 (759)
Q Consensus 279 kaGav~vpldp~~~------~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~ 352 (759)
.+|.+++|+.|-.. ...+..|++.++++.|+++.......+.- ++.....+ .....+++.++..
T Consensus 849 y~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr-------~~s~~~~~--s~~p~i~~~~~~~- 918 (1363)
T KOG3628|consen 849 YLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSR-------EASAHVDQ--SAIPLILVLPKLP- 918 (1363)
T ss_pred hcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhh-------hHHHHhhh--hcchhhhcccccc-
Confidence 99999999988543 34688899999999999987642111100 11111100 0111112111110
Q ss_pred ccccccccCCCCccchhhh---cCCCCCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHHhCCCCC
Q 004348 353 MTRENTKWQDGRDIWWQDV---VPKYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYAFDYKPS 429 (759)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~~~l~~~ 429 (759)
..|... ..+.....++.....+.+||+-|.--++|.--|+.++|.+ +.+.....+....+.+.
T Consensus 919 -------------~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHss-lla~Ck~iKe~~~l~~~ 984 (1363)
T KOG3628|consen 919 -------------ETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSS-LLAFCKIIKETCQLYKS 984 (1363)
T ss_pred -------------hhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHH-HHHHHHHHHHHHccccC
Confidence 001111 1111122223345678899999999999999999999999 67778888888888887
Q ss_pred cEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccc-----c
Q 004348 430 DVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYV-----T 504 (759)
Q Consensus 430 d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~-----~ 504 (759)
.-++...+..-..|+....+...++|.+.++.+......+|..|++.|++|+|.-++.+=..+..+.+...... .
T Consensus 985 rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~ 1064 (1363)
T KOG3628|consen 985 RPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKR 1064 (1363)
T ss_pred CceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhh
Confidence 77777777666667666677788899998888765555689999999999999998888888887766533111 1
Q ss_pred cCCCCCeeEEEEeCCCCCHHHHHHHHHHh---CCCCccEeeeecc-------------ccccceecc--cCCCC--CC--
Q 004348 505 RYSRKSLRVLGSVGEPINPSAWRWFFNVV---GDSRCPISDTWWQ-------------TETGGFMIT--PLPGA--WP-- 562 (759)
Q Consensus 505 ~~~l~sLr~v~~gGe~l~~~~~~~~~~~~---g~~~~~l~n~YG~-------------TE~~~~~~~--~~~~~--~~-- 562 (759)
..+.++ ..++..-|.....+..-|.+.+ |-.-..+.-.|+. .|-+..-.- ..... ..
T Consensus 1065 gnn~s~-s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve 1143 (1363)
T KOG3628|consen 1065 GNNTSS-SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVE 1143 (1363)
T ss_pred hccccc-ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeee
Confidence 112222 2333334444444544444333 2111122223332 221111000 00000 00
Q ss_pred -CCCC-----CcCCCCCCceEEEECC-CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcc--------cCCcEE
Q 004348 563 -QKPG-----SATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFK--------PFPGYY 627 (759)
Q Consensus 563 -~~~~-----~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~--------~~~g~y 627 (759)
..+. ..|...+++++.|+++ ...++..|+.|||++.+ +.-+.+|++-.+......|. ...+|-
T Consensus 1144 ~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S--~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~ 1221 (1363)
T KOG3628|consen 1144 VGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNS--AHNASCSFTIGDELRSNHFNARLSSGDLLGKSYA 1221 (1363)
T ss_pred cCCCCccccccCCcccccceeEEeCCccccccccCCcceEEecc--ccccccccccCchhhhhhhhhhccccccccccce
Confidence 0111 2377888999999997 56789999999999999 77777777643223333221 123499
Q ss_pred EeCCeee-----------------------------ccEeeCHHHHHHHH-hcCCccceEEEEeEecCCCCeEEEEEEEE
Q 004348 628 FTGDGCS-----------------------------SGHRIGTAEVESAL-VSHPQCAEAAVVGVEHEVKGQGIYAFVTL 677 (759)
Q Consensus 628 ~TGDl~~-----------------------------~G~rI~~~eIE~~L-~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~ 677 (759)
||||+|. +|.|..|.+||..+ +.||.|.+|+|+-. +..+|..+..
T Consensus 1222 RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~-----~glvVvviE~ 1296 (1363)
T KOG3628|consen 1222 RTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQA-----TGLVVVVIEC 1296 (1363)
T ss_pred eeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEee-----CCeEEEEEEe
Confidence 9999998 99999999999877 57999999999843 3456777766
Q ss_pred cCCCCCcHHHHHHHHHHHHhhcCC-CccccEEEEeC--CCCCCCCCcccHHHHHHHHhc
Q 004348 678 VEGVPYSEELRKSLVLAVRKQIGA-FAAPDKIHWAP--GLPKTRSGKIMRRILRKIASR 733 (759)
Q Consensus 678 ~~~~~~~~~l~~~l~~~l~~~Lp~-~~vP~~iv~v~--~lP~T~~GKvdR~~L~~~~~~ 733 (759)
..... -.++.--|.. ..|.. +-+-..+++++ .+|+++.|...|..+++.+.+
T Consensus 1297 ~gq~~-~~~LvPlIv~---~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~ 1351 (1363)
T KOG3628|consen 1297 HGQQE-LADLVPLIVN---VVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLA 1351 (1363)
T ss_pred cCchh-HhhhhHHHHH---HHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHh
Confidence 65221 1122222222 22332 44555677777 499999999999998877553
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.88 E-value=2.9e-20 Score=199.39 Aligned_cols=306 Identities=21% Similarity=0.207 Sum_probs=214.1
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.-++...|--||||||+|+-+..+...+... ...+. ...+...+|++.....++...|....-+++--.|++++-.
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~w-a~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERW-AELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHH-HHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 3455666888999999999999998874332 22222 2357788999887777665555433344555567665544
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEe
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~ 541 (759)
.+ -+.++.+++++++++|++.++|+.+..|++..........-.+||.+++|+|+++++..+.+.+.+| +..+
T Consensus 167 ~~----g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g---~~~~ 239 (438)
T COG1541 167 SG----GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG---CKAF 239 (438)
T ss_pred CC----ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC---Ccee
Confidence 33 2678899999999999999999999999887543221234468999999999999999999999998 8889
Q ss_pred eeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECC-CCcccCCCceEEEEEecCCCcccccccCChhhHHhhhc
Q 004348 542 DTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYF 620 (759)
Q Consensus 542 n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~ 620 (759)
+.||.||..+.....+.. .. -.--+-+...++|+|+ .|++++.|..|||+++. +.+. ...++
T Consensus 240 diYGltE~~g~g~~eC~~----~~-glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~----L~~~--------~~PlI 302 (438)
T COG1541 240 DIYGLTEGFGPGAGECTE----RN-GLHIWEDHFIFEIVDPETGEQLPDGERGELVITT----LTKE--------GMPLI 302 (438)
T ss_pred eccccccccCCccccccc----cc-CCCcchhhceeeeecCCcCccCCCCCeeEEEEEe----cccc--------CcceE
Confidence 999999997653111111 11 1112335678899995 89999999999999987 2111 11112
Q ss_pred ccCCcEEEeCCeee----------------------------ccEeeCHHHHHHHHhcCCccc-eEEEEeEecCCCCeEE
Q 004348 621 KPFPGYYFTGDGCS----------------------------SGHRIGTAEVESALVSHPQCA-EAAVVGVEHEVKGQGI 671 (759)
Q Consensus 621 ~~~~g~y~TGDl~~----------------------------~G~rI~~~eIE~~L~~~p~V~-ea~Vv~~~~~~~~~~l 671 (759)
-|+|||+.+ +|..|.|..||.+|.+.+.+. +-.++... ....+.+
T Consensus 303 -----RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L 376 (438)
T COG1541 303 -----RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDEL 376 (438)
T ss_pred -----EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceE
Confidence 499999987 899999999999999999999 54444444 4456678
Q ss_pred EEEEEEcCCCCCcHH---HHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCccc
Q 004348 672 YAFVTLVEGVPYSEE---LRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIM 723 (759)
Q Consensus 672 va~Vv~~~~~~~~~~---l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvd 723 (759)
.+-|+..++...... +.++|.+.++..++.- +--.++.+.++|+|.. |..
T Consensus 377 ~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~v~~v~~g~l~r~~~-K~k 429 (438)
T COG1541 377 TVRVELENEAEELEDERRLAKKLIKNIKSELGVR-VEVELVEPGELPRTEG-KAK 429 (438)
T ss_pred EEEEEecCcccchHHHHHHHHHHHHHHHhhcCCc-eEEEEEeccceecccC-cee
Confidence 888888764222221 2245656566655421 2223555668999875 644
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=8e-19 Score=188.93 Aligned_cols=126 Identities=29% Similarity=0.389 Sum_probs=108.6
Q ss_pred CCcEEEeCCeee---------------cc---EeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCc
Q 004348 623 FPGYYFTGDGCS---------------SG---HRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS 684 (759)
Q Consensus 623 ~~g~y~TGDl~~---------------~G---~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~ 684 (759)
.+|||+|||+|+ +| ++|+|. ||++|.+||+|.+|+|++++++..++.++|||++... .+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~~--~~ 283 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEGTGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAELP--AD 283 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCcCCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECCC--CC
Confidence 478999999998 46 799999 9999999999999999999999999999999998742 22
Q ss_pred HHHHHHHHHHHHhhcCCCccccEEEEeCCCCCCCCCcccHHHHHHHHhcccCCCCCC-CCCCChhhHHHHHh
Q 004348 685 EELRKSLVLAVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDT-STLADPGVVDQLIA 755 (759)
Q Consensus 685 ~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~lP~T~~GKvdR~~L~~~~~~~~~~~~~~-~~~~~p~~~~~~~~ 755 (759)
.++|+++|+++||. ++|+.|+++++||+|++|||+|++|++++....+.+.|+ +++++..+++.+.+
T Consensus 284 ---~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 351 (365)
T PRK09188 284 ---EKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQIDELDDLLREPEIRGLVEAIAA 351 (365)
T ss_pred ---HHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhcccccccccccChhHHHHHHHHHH
Confidence 57899999999999 999999999999999999999999999988877777776 55555555555443
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.65 E-value=2.1e-14 Score=163.39 Aligned_cols=472 Identities=16% Similarity=0.161 Sum_probs=300.0
Q ss_pred cCCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCC--hHHHHHHHHHHHhCCeEEecCC
Q 004348 213 GLGDKVAIYWEANDPGVDATLTYSQLLQQVCQLAN-YLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVFA 289 (759)
Q Consensus 213 ~~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~-~L~~~Gv~~gd~Vai~~~~s--~e~iva~LA~~kaGav~vpldp 289 (759)
..+...|.++-+..+ ....+||..+..++.++|+ .|.+.|.+++|+|.++...+ .|+++..++|.-.|.+.+|+.+
T Consensus 106 hs~~~ta~i~id~kg-k~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp~~e 184 (1363)
T KOG3628|consen 106 HSATSTAHICIDKKG-KATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVPLSE 184 (1363)
T ss_pred CCCCCceEEEEcCCC-ceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeeccchh
Confidence 678889999887763 4889999999999999999 78888999999999999655 8999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHHHHHHHHHhhcCCCccEEEEeccCccccccccccCCCCccchh
Q 004348 290 GFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIVDAALDECAKSGISVDVCLTYENQSAMTRENTKWQDGRDIWWQ 369 (759)
Q Consensus 290 ~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 369 (759)
.++.+++..+++-...+++++.....+.............+++. |.
T Consensus 185 ~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~----------------------------------w~ 230 (1363)
T KOG3628|consen 185 LSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAW----------------------------------WK 230 (1363)
T ss_pred hhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHh----------------------------------hh
Confidence 99999999999999999999877643211111000001111111 11
Q ss_pred hhcCCC---CCCCCccccCCCCcEEEEeccCCCCCCcEEEEccchHHHHH--------------HHHH-----HHHhCCC
Q 004348 370 DVVPKY---PTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--------------ATTF-----KYAFDYK 427 (759)
Q Consensus 370 ~~~~~~---~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--------------~~~~-----~~~~~l~ 427 (759)
..-... .+....+..... ..||-||++++|.--|++.+|. ++.+. ..++ ...++..
T Consensus 231 t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~ 308 (1363)
T KOG3628|consen 231 TNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVP 308 (1363)
T ss_pred cccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccC
Confidence 000000 000111122233 8999999999999999999998 33221 1111 1223445
Q ss_pred CCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhc----CCc--
Q 004348 428 PSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRD----GNE-- 501 (759)
Q Consensus 428 ~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~----~~~-- 501 (759)
..+.++......--.|+++.++.+|++|.+.+-++..-. ..|..+..++.++|.+++.+--..|...... +..
T Consensus 309 ~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l-~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~ 387 (1363)
T KOG3628|consen 309 SEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVL-KPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATL 387 (1363)
T ss_pred cccceeeccCcccccchhhhhhhhhhcCceeecCchhhc-CCCcchhhhhccceeEEEeecccccCcccccccCCccccc
Confidence 556666666666667778889999999999999987533 4788999999999999887764444433221 110
Q ss_pred ---ccccCCCCCeeEEEEeCCCCCHHHHH----HHHHHhCCCCccE---------------eeeeccccccceecccCCC
Q 004348 502 ---YVTRYSRKSLRVLGSVGEPINPSAWR----WFFNVVGDSRCPI---------------SDTWWQTETGGFMITPLPG 559 (759)
Q Consensus 502 ---~~~~~~l~sLr~v~~gGe~l~~~~~~----~~~~~~g~~~~~l---------------~n~YG~TE~~~~~~~~~~~ 559 (759)
..+.-++++||.+++.-+.+..+..+ +|.+-+|....++ +..=++.|++....- .++
T Consensus 388 s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r-~p~ 466 (1363)
T KOG3628|consen 388 SFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIR-RPE 466 (1363)
T ss_pred chhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhccccc-Ccc
Confidence 01124689999999999999988553 3333334211111 111122444432221 111
Q ss_pred C-----------------------------CCCCCCCcCCCCCC-ceEEEECC-CCcccCCCceEEEEEecCCCcccccc
Q 004348 560 A-----------------------------WPQKPGSATFPFFG-VQPVIVDE-KGVEIEGECSGYLCIKSSWPGAFRTL 608 (759)
Q Consensus 560 ~-----------------------------~~~~~~~iG~p~~g-~~~~IvD~-~g~~vp~g~~GEL~I~g~~~~v~~GY 608 (759)
. ........|.-.+| +.+.|+++ ..+.|..++.|||||.+ +++..+|
T Consensus 467 ~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS--~~~~~~~ 544 (1363)
T KOG3628|consen 467 QMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSS--NSLGKLF 544 (1363)
T ss_pred cccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEec--CCcccce
Confidence 0 00011124444444 45666665 56889999999999999 8999999
Q ss_pred cCChhhHHhhhcc-------cCC---cEEEeCCeee-------------------ccEeeCHHH----------HHHHHh
Q 004348 609 YGDHERYETTYFK-------PFP---GYYFTGDGCS-------------------SGHRIGTAE----------VESALV 649 (759)
Q Consensus 609 ~~~~e~~~~~~~~-------~~~---g~y~TGDl~~-------------------~G~rI~~~e----------IE~~L~ 649 (759)
|.-+..+...|-. ..+ .+.|||=+|+ +|.+....+ |+.+.+
T Consensus 545 ~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R 624 (1363)
T KOG3628|consen 545 YALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMR 624 (1363)
T ss_pred eeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHh
Confidence 9876555444410 111 2788888887 444444333 455566
Q ss_pred cCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHH--HHHHHHHHHh--hcCCCccccEEEEeCCCCCCCCCcccHH
Q 004348 650 SHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEEL--RKSLVLAVRK--QIGAFAAPDKIHWAPGLPKTRSGKIMRR 725 (759)
Q Consensus 650 ~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l--~~~l~~~l~~--~Lp~~~vP~~iv~v~~lP~T~~GKvdR~ 725 (759)
..+.|-++.++- +++++..++-.+.....+.+ ..++.+.+.. ++..|-+ .++..+.||||+-|-|.-.
T Consensus 625 ~v~~VF~~saf~------~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCi--livP~~tLPrt~~~Gi~~~ 696 (1363)
T KOG3628|consen 625 GVIAVFDVSAFE------DEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCI--LIVPANTLPRTPLGGIHNN 696 (1363)
T ss_pred ccceEEEEeeee------cceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEE--EEeccccCCCccccccccH
Confidence 667788888773 44555555544443211111 1222222222 2333322 4666678999998889999
Q ss_pred HHHHHHhc
Q 004348 726 ILRKIASR 733 (759)
Q Consensus 726 ~L~~~~~~ 733 (759)
.+++.|..
T Consensus 697 ~~k~~F~~ 704 (1363)
T KOG3628|consen 697 ECKQAFLE 704 (1363)
T ss_pred HHHHHHHc
Confidence 99998864
No 131
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.52 E-value=2.8e-12 Score=141.67 Aligned_cols=239 Identities=14% Similarity=0.073 Sum_probs=147.9
Q ss_pred cEEEEeccCCCCCCcEEEEccchHHHHHHHHHHHH--hCCCCCcEEEEecCcchhchhhHHHHHHhhcCcE-EEEecCCC
Q 004348 389 PLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFKYA--FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGAS-VVVFEGAP 465 (759)
Q Consensus 389 ~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~~~--~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~t-lvl~~~~~ 465 (759)
-..+..||||||+|-.+.++............... .++..++++..+. |..+ .++.++.+... +..++-
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~---~ly~~~~~~~~~~~~~~l-- 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN---NLYQSVNNRWISLDFFDL-- 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh---hHHHHHHhccceeeecCC--
Confidence 45677899999999999999886433322222211 2455666655542 1111 12223323221 233321
Q ss_pred CCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeec
Q 004348 466 TYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWW 545 (759)
Q Consensus 466 ~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG 545 (759)
. .+.+.+++.|++++++++.+.|+.+..|++...+. ..+ .+++.++++||.++++..+.+.+.|| +++++.||
T Consensus 173 ~-~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~--~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg---~~V~~~YG 245 (430)
T TIGR02304 173 L-APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEG--ELT-IKPKKVISVAEVLEPQDRELIRNVFK---NTVHQIYQ 245 (430)
T ss_pred C-cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhc--CCC-CCceEEEEccCCCCHHHHHHHHHHhC---CCeeEccC
Confidence 2 37889999999999999999999999998864321 112 47899999999999999999999998 89999999
Q ss_pred cccccceecccCCCCCCCCCCCcCCCCCCceEE--EECCCCcccCCCceEEEEEecCCCcccccccCChhhHHhhhcccC
Q 004348 546 QTETGGFMITPLPGAWPQKPGSATFPFFGVQPV--IVDEKGVEIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPF 623 (759)
Q Consensus 546 ~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~--IvD~~g~~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~ 623 (759)
+|| |.+.. .+.. +..-.--..+-++ ++|++++++ .+|++ +.|. ...++
T Consensus 246 ~tE-g~la~-eC~~------g~lHl~ed~~~vE~~ivD~~~~~~-------~ViT~--------L~n~----~~PlI--- 295 (430)
T TIGR02304 246 ATE-GFLAS-TCRC------GTLHLNEDLVHIEKQYLDEHKRFV-------PIITD--------FTRT----TQPIV--- 295 (430)
T ss_pred Cch-hheEE-ecCC------CCEEEccccEEEEeeEECCCCceE-------EEEec--------CCCc----cceEE---
Confidence 999 54332 1111 1110011123344 788876433 36665 1111 11111
Q ss_pred CcEEEeCCeee-------------------------------cc--EeeCHHHHHHHHh-cCCccceEEEEeEecCCCCe
Q 004348 624 PGYYFTGDGCS-------------------------------SG--HRIGTAEVESALV-SHPQCAEAAVVGVEHEVKGQ 669 (759)
Q Consensus 624 ~g~y~TGDl~~-------------------------------~G--~rI~~~eIE~~L~-~~p~V~ea~Vv~~~~~~~~~ 669 (759)
-|+|||+++ +| ..|.|..|+.++. ..+.|.+.-++-. ..+
T Consensus 296 --RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~----~~~ 369 (430)
T TIGR02304 296 --RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT----GSA 369 (430)
T ss_pred --eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc----cCC
Confidence 378888755 34 4458999998854 5789998877622 233
Q ss_pred EEEEEEEEc
Q 004348 670 GIYAFVTLV 678 (759)
Q Consensus 670 ~lva~Vv~~ 678 (759)
.+...++..
T Consensus 370 ~l~v~~~~~ 378 (430)
T TIGR02304 370 QLELIADCE 378 (430)
T ss_pred eEEEEEEeC
Confidence 455555553
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.46 E-value=1.8e-13 Score=113.00 Aligned_cols=70 Identities=40% Similarity=0.550 Sum_probs=62.6
Q ss_pred HHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccc--cEEEEeCC-CCCCCC
Q 004348 643 EVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAP--DKIHWAPG-LPKTRS 719 (759)
Q Consensus 643 eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP--~~iv~v~~-lP~T~~ 719 (759)
|||++|.+||+|.+|+|++++++..|+.++|||++ ..++|+++++++||+||+| ..++.+++ ||+|+|
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~---------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~ 71 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL---------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPS 71 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE---------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETT
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe---------eecccccchhhhCCCcceeeEEEEccccCcCCCCCC
Confidence 89999999999999999999999889999999998 1489999999999999999 66666777 999999
Q ss_pred Cc
Q 004348 720 GK 721 (759)
Q Consensus 720 GK 721 (759)
||
T Consensus 72 GK 73 (73)
T PF13193_consen 72 GK 73 (73)
T ss_dssp SS
T ss_pred CC
Confidence 99
No 133
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.26 E-value=4.7e-05 Score=82.67 Aligned_cols=202 Identities=14% Similarity=0.093 Sum_probs=109.3
Q ss_pred cCCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---HHhC-CCCC-cEEEEecCcchhchhh----HHHHHHhhc
Q 004348 384 VDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFD-YKPS-DVYWCTADCGWITGHS----YVTYGPMLN 454 (759)
Q Consensus 384 ~~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~-l~~~-d~~l~~~~l~~~~g~~----~~~~~~L~~ 454 (759)
...+++..++-||||||.|--+.+.+.. +......+. ..+. .... -.++...|-......+ ......+..
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t-~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~ 164 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRET-AERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFF 164 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHH-HHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhccc
Confidence 3456677889999999998656565544 222222222 2122 2211 1233333322111111 122233445
Q ss_pred CcEEEEecCCCCCCChhHHHHHHH----HcCCcEEEehHHHHHHHHhcCCcccccCCCC-CeeEEEEeC------CCCCH
Q 004348 455 GASVVVFEGAPTYPDSGRSWDIVD----KYKVTIFYTAPTLVRSLMRDGNEYVTRYSRK-SLRVLGSVG------EPINP 523 (759)
Q Consensus 455 G~tlvl~~~~~~~~d~~~l~~~i~----~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~-sLr~v~~gG------e~l~~ 523 (759)
+.. ...++. ..|.+.+++.+. +.++..++..|.++-.++....+......|+ ..+.+-.|| |.++.
T Consensus 165 ~~~-~~l~~~--~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r 241 (365)
T PF04443_consen 165 GSR-FALDND--ELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSR 241 (365)
T ss_pred Cce-eeecCC--ccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCH
Confidence 555 344332 236676666664 3456678887876665554432222223443 345555555 34665
Q ss_pred -HHHHHHHHHhCC-CCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceEEEECC-CCcccCCCceEEEEEec
Q 004348 524 -SAWRWFFNVVGD-SRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE-KGVEIEGECSGYLCIKS 599 (759)
Q Consensus 524 -~~~~~~~~~~g~-~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~~IvD~-~g~~vp~g~~GEL~I~g 599 (759)
+..+.+.+.+|- +.-++++.||+||.....+..-.+ . .+.|-. +.|.|+ +.+++|.|+.|-|.+-.
T Consensus 242 ~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~---~------~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vid 310 (365)
T PF04443_consen 242 EEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG---H------FHVPPW-VIIRDPETLEPLPPGETGLIQVID 310 (365)
T ss_pred HHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCCC---c------ccCCCe-EEEECCCCCcCCCCCCeeEEEEEc
Confidence 455666777884 345899999999977543321111 0 122222 667787 67999999999998877
No 134
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.47 E-value=0.00087 Score=58.26 Aligned_cols=85 Identities=21% Similarity=0.336 Sum_probs=57.6
Q ss_pred cEeeCHHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCC----cHHHHHHHHHHHHhhcCCCccccEEEEe
Q 004348 636 GHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPY----SEELRKSLVLAVRKQIGAFAAPDKIHWA 711 (759)
Q Consensus 636 G~rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~----~~~l~~~l~~~l~~~Lp~~~vP~~iv~v 711 (759)
|.+|+|..||++|.++|++.....+.+......+.+...|...++... .+++.++|.+.|++.|.- .| .+.++
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv--~~-~V~lv 77 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGV--RP-EVELV 77 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS---E-EEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCc--eE-EEEEE
Confidence 789999999999999999994444445444467788888998886542 256678888889998863 23 45555
Q ss_pred --CCCCCCCCCcccH
Q 004348 712 --PGLPKTRSGKIMR 724 (759)
Q Consensus 712 --~~lP~T~~GKvdR 724 (759)
.+||++ .||..|
T Consensus 78 ~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 78 PPGTLPRS-EGKAKR 91 (96)
T ss_dssp -TT-S----SSSS-S
T ss_pred CCCCccCC-CCcceE
Confidence 479998 678655
No 135
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.42 E-value=0.0011 Score=76.03 Aligned_cols=144 Identities=18% Similarity=0.082 Sum_probs=77.0
Q ss_pred CCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEeeeeccccccceecccCCCCCCCCCCCcCCCCCCceE-EE--ECCC-
Q 004348 508 RKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQP-VI--VDEK- 583 (759)
Q Consensus 508 l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~g~~~-~I--vD~~- 583 (759)
+|.|+.|.+-+..-...-.+++++.+|. -..+...|+.||+-. .+ +... . ...+...++..+ +- +|+.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~-~~~~~~~y~ASEg~i-~i-~~~~---~--~~~~~l~~~~~ffEFip~~~~~ 337 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGG-VPIQSKGYGASEGFI-GI-PLDP---E--DPGYVLAPDSGFFEFIPVDEDE 337 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTT-S-EEE-EEEETTEEE-EE-ES-C---C--C--EEE-TTSSEEEEEE-STT-
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCC-CceeeccccccceEE-EE-ecCC---C--CCceEeecCCeEEEEEeccCCc
Confidence 6899977766665555667788888884 233457899999632 22 2210 1 112233333322 22 2321
Q ss_pred ------Cc-----ccCCCceEEEEEecCCCcccccccCChhhHHhhhcccCCcEEEeCCeee------------------
Q 004348 584 ------GV-----EIEGECSGYLCIKSSWPGAFRTLYGDHERYETTYFKPFPGYYFTGDGCS------------------ 634 (759)
Q Consensus 584 ------g~-----~vp~g~~GEL~I~g~~~~v~~GY~~~~e~~~~~~~~~~~g~y~TGDl~~------------------ 634 (759)
.+ .|..|+.=||+|+.. .|.| -|+.||+++
T Consensus 338 ~~~~~~~~~l~~~ele~G~~YelviTt~-----~GLy----------------RY~iGDvVrv~gf~~~~P~i~F~~R~~ 396 (528)
T PF03321_consen 338 QNPSEQPKTLLLHELEVGEEYELVITTN-----SGLY----------------RYRIGDVVRVTGFYNQTPRIEFVGRRG 396 (528)
T ss_dssp ------SSSEEGGG--TT-EEEEEEEST-----TS-S----------------SEEECEEEEEEEEETTEEEEEEEEETT
T ss_pred ccccCCCceecHHHhcCCCeEEEEEecc-----ccee----------------eeecCCEEEEeeccCCCcEEEEeccCC
Confidence 22 356788889998872 1221 288888877
Q ss_pred -----ccEeeCHHHHHHHHhcC-----CccceEEEEeEecCCCCeEEEEEEEEcCC
Q 004348 635 -----SGHRIGTAEVESALVSH-----PQCAEAAVVGVEHEVKGQGIYAFVTLVEG 680 (759)
Q Consensus 635 -----~G~rI~~~eIE~~L~~~-----p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~ 680 (759)
.|+++.-.+|+++|.+. -.+.+..+...........-+.|+.+...
T Consensus 397 ~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~ 452 (528)
T PF03321_consen 397 QVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWELEGE 452 (528)
T ss_dssp EEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEECS-
T ss_pred ceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEeCCC
Confidence 79999999999998775 34566666644222334556677777654
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=95.88 E-value=0.53 Score=54.67 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=23.8
Q ss_pred cCCCCcEEEEeccCCC-CCCcEEEEccch
Q 004348 384 VDAEDPLFLLYTSGST-GKPKGVLHTTGG 411 (759)
Q Consensus 384 ~~~~d~a~IiyTSGST-G~PKgV~~th~~ 411 (759)
..++.+.+..-||||| |++|-|.+|...
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~ 125 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEED 125 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHH
Confidence 3466778899999999 899999999854
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=95.40 E-value=0.79 Score=52.89 Aligned_cols=27 Identities=19% Similarity=0.121 Sum_probs=23.0
Q ss_pred CCCCcEEEEeccCCCC-CCcEEEEccch
Q 004348 385 DAEDPLFLLYTSGSTG-KPKGVLHTTGG 411 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG-~PKgV~~th~~ 411 (759)
.++.+.+..-|||||| ++|-|.+|+..
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~ 126 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEE 126 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHH
Confidence 4566778999999997 69999999886
No 138
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=94.83 E-value=0.88 Score=52.61 Aligned_cols=27 Identities=33% Similarity=0.379 Sum_probs=23.3
Q ss_pred CCCCcEEEEeccCCCC-CCcEEEEccch
Q 004348 385 DAEDPLFLLYTSGSTG-KPKGVLHTTGG 411 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG-~PKgV~~th~~ 411 (759)
.++.+.+..-|||||| ++|-|.+|+..
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~ 114 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEE 114 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHH
Confidence 3667789999999995 99999999875
No 139
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=94.76 E-value=0.002 Score=55.19 Aligned_cols=44 Identities=14% Similarity=0.085 Sum_probs=30.1
Q ss_pred cccCCCCCCCCCcchhhhhhhccccccCCCcccCCChhhhhccCCC
Q 004348 95 ESLASFPSGAGKISRLNAVILGEALSSEENDIVLPSDDFSRQALVP 140 (759)
Q Consensus 95 ~~~~~~~~~~~~fdl~~~~~~~~~~~~~~~~~~y~~~lf~~~~~~~ 140 (759)
....+++.+.+||||++.+.+.+ +++.+.++|+++||++++|++
T Consensus 47 ~~~~~~~~~~~~~DL~l~~~~~~--~~l~~~~~Y~~~lf~~~ti~~ 90 (91)
T PF13745_consen 47 LEPIPLENGGAKFDLTLEVREDG--DGLRLQLEYNTDLFSEETIER 90 (91)
T ss_dssp EEE-SS--SB-SSSEEEEEEE-S--S-EEEEEEEETTT--HHHHHH
T ss_pred EEEeeccccceeeeEEEEEEecC--CeEEEEEEEEhHhCCHHHHhc
Confidence 33445678899999999988554 889999999999999998875
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=92.47 E-value=0.53 Score=51.95 Aligned_cols=83 Identities=23% Similarity=0.198 Sum_probs=70.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh--HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEE
Q 004348 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (759)
Q Consensus 231 ~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~i 308 (759)
--+|+.++...+..+|+.|...|+.+||+|.++..-++ .-+...+|+.++|+.++|+.+. .-++...++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 35899999999999999999999999999988876221 1167888999999999999883 55677889999999999
Q ss_pred EEeCCc
Q 004348 309 ITSNAV 314 (759)
Q Consensus 309 it~~~~ 314 (759)
.+...+
T Consensus 187 ~~tps~ 192 (438)
T COG1541 187 AATPSY 192 (438)
T ss_pred EEChHH
Confidence 998765
No 141
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=79.26 E-value=12 Score=42.32 Aligned_cols=79 Identities=18% Similarity=0.160 Sum_probs=61.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHH--HHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEE
Q 004348 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMEL--PIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (759)
Q Consensus 231 ~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~--iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~i 308 (759)
-.+|..++...+..+++.+...|+.+||++.++.+.+... ...++++.+.|+..+|... .+....++++.++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 4578999998888888888889999999999988766432 2345788999998877543 2455778899999988
Q ss_pred EEeC
Q 004348 309 ITSN 312 (759)
Q Consensus 309 it~~ 312 (759)
+...
T Consensus 181 ~~~p 184 (445)
T TIGR03335 181 VASV 184 (445)
T ss_pred EECH
Confidence 7643
No 142
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=77.09 E-value=13 Score=41.39 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=63.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh--HHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEE
Q 004348 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (759)
Q Consensus 231 ~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~i 308 (759)
-.+|..++......+++.+...|+++||++......+. ......++..+.|+..+++.+.. .+++...|++.++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 34677888777777788888889999999887665442 22334677889999988887654 5788899999999999
Q ss_pred EEeCCc
Q 004348 309 ITSNAV 314 (759)
Q Consensus 309 it~~~~ 314 (759)
+.....
T Consensus 172 ~~~Ps~ 177 (422)
T TIGR02155 172 MVTPSY 177 (422)
T ss_pred EEcHHH
Confidence 987653
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=75.33 E-value=14 Score=37.49 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=55.5
Q ss_pred CCCeEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh--HHHHHHHHHHHhCCeEEecCCCC
Q 004348 214 LGDKVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVFAGF 291 (759)
Q Consensus 214 ~pd~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--e~iva~LA~~kaGav~vpldp~~ 291 (759)
.+|.+|++... .-.|...+...+ ...|+.++|++. .+|-.- -+...+++++..|+..+.+ +.+
T Consensus 148 ~~~D~a~l~yT------sg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rF 212 (227)
T TIGR03089 148 DATAPALVAGG------GEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THP 212 (227)
T ss_pred CCCcceeeecc------ccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCC
Confidence 44667776552 113444443322 667899999999 888553 4556789999999988887 689
Q ss_pred CHHHHHHHHHhcCC
Q 004348 292 SSDSLAQRIMDCKP 305 (759)
Q Consensus 292 ~~~~l~~il~~~~~ 305 (759)
.++++...+++.++
T Consensus 213 d~~~~l~~i~~~~v 226 (227)
T TIGR03089 213 DPARLDQIAETERV 226 (227)
T ss_pred CHHHHHHHHHhhcC
Confidence 99999999988765
No 144
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=69.85 E-value=12 Score=36.27 Aligned_cols=56 Identities=14% Similarity=0.104 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCC
Q 004348 641 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGA 701 (759)
Q Consensus 641 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~ 701 (759)
..+|+..+.+.|+|.+|.|+...+ +.+||+-+- ......+++++++.+.+++..|.
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~----~a~Vav~~~-~~~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDD----NAYVAVDLD-FNRFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECC----EEEEEEEec-ccccchhHHHHHHHHHHHHhCCC
Confidence 456899999999999999997633 345555443 22334466778888888888776
No 145
>PLN02736 long-chain acyl-CoA synthetase
Probab=68.98 E-value=66 Score=38.22 Aligned_cols=121 Identities=12% Similarity=-0.052 Sum_probs=77.6
Q ss_pred CCCCcEEEE--eccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEE
Q 004348 385 DAEDPLFLL--YTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (759)
Q Consensus 385 ~~~d~a~Ii--yTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl 460 (759)
.|+.+++.. ...|.+|. -..+|.+.+.... +...-...++.++|++...++-+... ...+++.+..|+.++.
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vp 132 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVP 132 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEE
Confidence 456666532 12333332 1336777633222 11222346899999998888766543 3456788889999887
Q ss_pred ecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 461 ~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
.+.. ..++.+..+|++-+++++++.+..+..+..... .++.++.+++.+
T Consensus 133 l~~~---~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~------~~~~l~~ii~~~ 181 (651)
T PLN02736 133 LYDT---LGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS------EIPSVRLIVVVG 181 (651)
T ss_pred eecC---CCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh------cCCCceEEEEEC
Confidence 7543 378999999999999999998887766654321 235666666543
No 146
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=58.51 E-value=51 Score=36.11 Aligned_cols=66 Identities=21% Similarity=0.213 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCCeEEEEe
Q 004348 242 VCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITS 311 (759)
Q Consensus 242 a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~-----~~~~~l~~il~~~~~~~iit~ 311 (759)
...|.-.|+.+|+++||-|.+ .+.-++...=+++..|+.+|.+|-+ .+++.++..|... .|.||..
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 455666788889999995543 5677888999999999988887654 5788999988876 6777754
No 147
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.18 E-value=90 Score=35.38 Aligned_cols=96 Identities=23% Similarity=0.195 Sum_probs=68.4
Q ss_pred CCCeEEEEEEcC-CCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh--HHHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--e~iva~LA~~kaGav~vpld 288 (759)
.++.+|.+...+ ..|. .-.+|++.+...+..+. ...+++++|++...++-.- .+...+++++..|+..++.
T Consensus 164 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 239 (513)
T PRK07656 164 DPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWA---EYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL- 239 (513)
T ss_pred CCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHH---HhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-
Confidence 456677665422 2222 34689998876665544 3447899999988887543 3456688999999987764
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 289 p~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
+.+..+.+...+++.++.++.+...
T Consensus 240 ~~~~~~~~~~~i~~~~~t~~~~~p~ 264 (513)
T PRK07656 240 PVFDPDEVFRLIETERITVLPGPPT 264 (513)
T ss_pred CcCCHHHHHHHHHHhCCeEEechHH
Confidence 5678999999999999999887554
No 148
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=56.03 E-value=2.9e+02 Score=31.97 Aligned_cols=100 Identities=11% Similarity=-0.066 Sum_probs=68.7
Q ss_pred CcEEEEeccCCCCCCcEEEEccchHHHH---HHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCC
Q 004348 388 DPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 464 (759)
Q Consensus 388 d~a~IiyTSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~ 464 (759)
+-..|+|-+-.++. -.+|.+.+... .+...+...+. ++|++...+|....+ ...+++++-.|+..+.+...
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~--~~a~LA~~riGAI~~~vf~~ 98 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA--VIALLATARIGAIPAVVSPG 98 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEeecccC
Confidence 44556665544444 45676663322 23333334567 999999999988765 35677888888876665432
Q ss_pred CCCCChhHHHHHHHHcCCcEEEehHHHHHHHH
Q 004348 465 PTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (759)
Q Consensus 465 ~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~ 496 (759)
+.++.+...|.+-++.++.+....++...
T Consensus 99 ---f~~~al~~Ri~d~~~k~vit~d~~~~~gk 127 (528)
T COG0365 99 ---LSAEAVADRIADLGPKVLIADDGTFRNGK 127 (528)
T ss_pred ---CCHHHHHHHHHccCCCEEEEecccccccc
Confidence 58999999999999999998877766543
No 149
>PRK08315 AMP-binding domain protein; Validated
Probab=54.16 E-value=1.2e+02 Score=35.06 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=67.2
Q ss_pred CCeEEEEEE-cCCCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--ChHHHHHHHHHHHhCCeEEecCC
Q 004348 215 GDKVAIYWE-ANDPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVFA 289 (759)
Q Consensus 215 pd~~Al~~~-~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~e~iva~LA~~kaGav~vpldp 289 (759)
++.+|.+.. +...|. .-.+|++.+...+..+.. ..+++++|++...+|- +..++..+++.+..|+..+....
T Consensus 198 ~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~ 274 (559)
T PRK08315 198 PDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGE---AMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE 274 (559)
T ss_pred CCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHH---hcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC
Confidence 444555443 222232 346888888766554443 3588999999887775 44556678899999998775566
Q ss_pred CCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 290 GFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 290 ~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
...+.++...+++.++.+++....
T Consensus 275 ~~~~~~~~~~l~~~~~t~~~~~P~ 298 (559)
T PRK08315 275 GFDPLATLAAVEEERCTALYGVPT 298 (559)
T ss_pred CCCHHHHHHHHHHcCCeEEecchH
Confidence 778889999999999999886544
No 150
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=52.82 E-value=1.8e+02 Score=35.28 Aligned_cols=120 Identities=14% Similarity=0.125 Sum_probs=77.8
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH---HHHHHHH--hCCCCC-----------cEEEEecCcchhchhhHHH
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT---ATTFKYA--FDYKPS-----------DVYWCTADCGWITGHSYVT 448 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~---~~~~~~~--~~l~~~-----------d~~l~~~~l~~~~g~~~~~ 448 (759)
.++.+|++.... |.+ ...+|.+.+.... ...+... .|+.++ |++...++-+... ....
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew--~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW--LVAD 147 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH--HHHH
Confidence 467777754322 221 1346766643222 2223221 378887 8888777765432 3457
Q ss_pred HHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeCC
Q 004348 449 YGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 449 ~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gGe 519 (759)
++++..|++.+..... ..++.+..+|++-++.++++.+.++..+..... .++.++.+++-+.
T Consensus 148 lA~~~~Gav~Vpl~~~---~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~------~~~~l~~ii~~~~ 209 (746)
T PTZ00342 148 LACMLSGVTTLVMHSK---FSIDVIVDILNETKLEWLCLDLDLVEGLLERKN------ELPHLKKLIILDT 209 (746)
T ss_pred HHHHHcCCeEEEecCC---CCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc------cCCCceEEEEECC
Confidence 8889999998887643 488999999999999999988888777765422 3567777766543
No 151
>PRK12583 acyl-CoA synthetase; Provisional
Probab=49.03 E-value=1.7e+02 Score=33.63 Aligned_cols=97 Identities=18% Similarity=0.233 Sum_probs=67.1
Q ss_pred CCCeEEEEEE-cCCCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--ChHHHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWE-ANDPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~-~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~e~iva~LA~~kaGav~vpld 288 (759)
.++.+|.+.. +...|. .-.+|++.+...+..+.. ..+++++|++....|- ....+..+++++..|+..+...
T Consensus 199 ~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~ 275 (558)
T PRK12583 199 DRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAE---SLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPN 275 (558)
T ss_pred CCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHH---HhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeec
Confidence 4555565443 222222 356889888666555443 3478999999887764 3556677888899999877445
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 289 p~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
..+..+++...+++.++.+++....
T Consensus 276 ~~~~~~~~~~~i~~~~~t~l~~~P~ 300 (558)
T PRK12583 276 EAFDPLATLQAVEEERCTALYGVPT 300 (558)
T ss_pred CCCCHHHHHHHHHHcCCeEEeccHH
Confidence 5678888899999999999886543
No 152
>KOG0883 consensus Cyclophilin type, U box-containing peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=48.71 E-value=13 Score=39.65 Aligned_cols=63 Identities=33% Similarity=0.569 Sum_probs=47.5
Q ss_pred EeeCce---eeeccccCCCCCCCccccc-cccCCCCCCCCCCccceeeecCCCceEEEeccCCcCCCCCCC
Q 004348 16 YYNNNV---CLSNLGVGGGASRGSTVGA-SSYSKPLNKSSSPPLKLIRQSGGGGAVVMASSGCNNNNGNNS 82 (759)
Q Consensus 16 ~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (759)
||||-. -+.|+-+-||--.|+--|+ |-.+||...---|+|+- -|.|-+-||++|=|+|.+++-
T Consensus 313 YYnnt~FHRsIrnFmiQGGDPTGTG~GGeSiWgKpFkDEf~~~l~H----~gRGvlSMANsGpnTNgSQFF 379 (518)
T KOG0883|consen 313 YYNNTIFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEFCSNLSH----DGRGVLSMANSGPNTNGSQFF 379 (518)
T ss_pred cccchHHHHHHHHHeeeCCCCCCCCCCCccccCCccccccCCCCCc----CCcceEeeccCCCCCCCceEE
Confidence 556543 3568888888777766555 55799999888888763 578999999999999986543
No 153
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.05 E-value=2.1e+02 Score=32.40 Aligned_cols=96 Identities=13% Similarity=0.116 Sum_probs=67.0
Q ss_pred CCCeEEEEEEcC-CCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHH-HHHHHHHHHhCCeEEecCC
Q 004348 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMEL-PIAMLACARIGAVHSVVFA 289 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~-iva~LA~~kaGav~vpldp 289 (759)
.++.+|.+.... ..|. .-.+|++.+...+..... ..+++++|++...++..... ....++++..|+..+..+.
T Consensus 165 ~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 165 DENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred CccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 345566665432 1122 246889988876655544 56889999998888755332 3344558889998877665
Q ss_pred CCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 290 GFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 290 ~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
++.+.+...+++.++.++++...
T Consensus 242 -~~~~~~~~~l~~~~~t~l~~~p~ 264 (521)
T PRK06187 242 -FDPENLLDLIETERVTFFFAVPT 264 (521)
T ss_pred -CCHHHHHHHHHHhCCeEEEchHH
Confidence 48899999999999999998654
No 154
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=46.94 E-value=64 Score=32.19 Aligned_cols=74 Identities=19% Similarity=0.135 Sum_probs=48.3
Q ss_pred eeCHHHHHHHHhcCCccceEEEEeEecCC-------CCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEE
Q 004348 638 RIGTAEVESALVSHPQCAEAAVVGVEHEV-------KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHW 710 (759)
Q Consensus 638 rI~~~eIE~~L~~~p~V~ea~Vv~~~~~~-------~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~ 710 (759)
|---+|+|+.|.+.++|..|-|...-.+. .....-+++.++++...+ +..+.|+..+....|. +-|..|.+
T Consensus 114 ~ale~eL~~tI~~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~-~qv~~I~~LVa~sV~g-L~~enVtV 191 (206)
T PF01514_consen 114 RALEGELERTIESIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS-EQVQGIQNLVASSVPG-LKPENVTV 191 (206)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G-GGHHHHHHHHHHHSTT---GGGEEE
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH-HHHHHHHHHHHHhcCC-CCcccEEE
Confidence 33456999999999999999987653221 112344556667777665 5578899999999885 56777777
Q ss_pred eCC
Q 004348 711 APG 713 (759)
Q Consensus 711 v~~ 713 (759)
+|.
T Consensus 192 vD~ 194 (206)
T PF01514_consen 192 VDQ 194 (206)
T ss_dssp EEE
T ss_pred EeC
Confidence 764
No 155
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=45.88 E-value=1.6e+02 Score=35.27 Aligned_cols=86 Identities=10% Similarity=0.032 Sum_probs=64.2
Q ss_pred HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcc
Q 004348 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEY 502 (759)
Q Consensus 423 ~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~ 502 (759)
..++.++|++...++-.... ....++.+..|+..+..... ..++.+..+|++-+++++++....+..+.....
T Consensus 125 ~lG~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~-- 197 (696)
T PLN02387 125 ALGHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYAS---LGEEALCHSLNETEVTTVICDSKQLKKLIDISS-- 197 (696)
T ss_pred HhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh--
Confidence 46899999998888766543 34577888999998877543 478999999999999999998887777665422
Q ss_pred cccCCCCCeeEEEEeCC
Q 004348 503 VTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 503 ~~~~~l~sLr~v~~gGe 519 (759)
.+++++.+++-++
T Consensus 198 ----~~~~l~~ii~~~~ 210 (696)
T PLN02387 198 ----QLETVKRVIYMDD 210 (696)
T ss_pred ----ccCCceEEEEECC
Confidence 3456777766554
No 156
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=45.58 E-value=1.4e+02 Score=32.78 Aligned_cols=89 Identities=11% Similarity=0.004 Sum_probs=62.2
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHH---HHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.|+.+|++. + .+-.+|...+... ....+. ..+++++|++....+-+... +..+++.+..|+..+..
T Consensus 8 ~pd~~a~~~------~--~~~~~Ty~~l~~~v~~la~~L~-~~g~~~~~~V~i~~~n~~~~--~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID------D--EGRSLTYKQLYERVRKLAAALR-KLGVKKGDRVAILLPNSIEF--VVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE------T--TTEEEEHHHHHHHHHHHHHHHH-HTTSSTTSEEEEEESSSHHH--HHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE------C--CCEEEEHHHHHHHHHHHhhHHH-HhCCCccccccccCCcccee--eeeeccccccccccccc
Confidence 567777766 1 2245677764332 223333 56889999888877766433 45678888999999998
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEe
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYT 487 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~ 487 (759)
+.. ...+.+..++++.+++++++
T Consensus 77 ~~~---~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPS---LSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETT---SSHHHHHHHHHHHTESEEEE
T ss_pred ccc---cccccccccccccceeEEEE
Confidence 753 37789999999999999886
No 157
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=45.50 E-value=89 Score=29.72 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=33.1
Q ss_pred HHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCC--CcHHHHHHHHHHHHhhcCCC
Q 004348 642 AEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVP--YSEELRKSLVLAVRKQIGAF 702 (759)
Q Consensus 642 ~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~--~~~~l~~~l~~~l~~~Lp~~ 702 (759)
..|...+.+.|+|.+|.|+...+ +.+|++- ++.+.. ..+++++++.+.+++.-|.+
T Consensus 57 ~~Ia~~v~~v~~V~dA~vvVtg~----~A~Vgv~-~~~~~~~~~~~~iK~~Va~~Vk~~dp~~ 114 (158)
T TIGR02898 57 DEIASEAAKVKGVKDATVVITGN----YAYVGVD-LTNGLEGSVTDELKEKVAETVKSTDNRI 114 (158)
T ss_pred HHHHHHHhcCCCCceEEEEEECC----EEEEEEE-cCCCcchhhHHHHHHHHHHHHHhhCCCc
Confidence 35888889999999999997643 3455553 222222 12344555555555544443
No 158
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=42.81 E-value=55 Score=35.71 Aligned_cols=66 Identities=23% Similarity=0.298 Sum_probs=44.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCCeEEEEeC
Q 004348 243 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 243 ~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~-----~~~~~l~~il~~~~~~~iit~~ 312 (759)
..|-..|..+|+++||.|++- ...+....-|++.+|+.++.+|-+ ..++.++..+..-. ++||...
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred HHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEec
Confidence 344556778999999988775 556677778899999977777654 46788888877544 5555543
No 159
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=42.73 E-value=2.7e+02 Score=32.03 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=67.5
Q ss_pred cCCCeEEEEEEcC-CCC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--hHHHHHHHHHHHhCCeEEec
Q 004348 213 GLGDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVV 287 (759)
Q Consensus 213 ~~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s--~e~iva~LA~~kaGav~vpl 287 (759)
..|+.+|++...+ ..| ..-.+|++.+...+... ....++.++|++..++|-. .-+...++..+..|+..+..
T Consensus 180 ~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~ 256 (539)
T PRK06334 180 KDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRAC---LKFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFA 256 (539)
T ss_pred CCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHH---HHhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEe
Confidence 3567777766532 222 24568998887654433 3446788999988887743 23334467778889877665
Q ss_pred CCCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 288 FAGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 288 dp~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
...+.++++...|++.++.++.....
T Consensus 257 ~~~~~~~~~~~~i~~~~~t~~~~~P~ 282 (539)
T PRK06334 257 YNPLYPKKIVEMIDEAKVTFLGSTPV 282 (539)
T ss_pred cCCCCHHHHHHHHHHhCCcEEEecHH
Confidence 55578899999999999999987654
No 160
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=42.58 E-value=1.6e+02 Score=33.24 Aligned_cols=111 Identities=13% Similarity=0.097 Sum_probs=69.5
Q ss_pred EEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 404 GVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 404 gV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
|+..|.+.+.... +++--...++.+||++....|-+.- + +...+++-..|..++... |.++ ..++.=.|++.+
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~-w-~l~~lA~A~AG~v~v~~N--P~Yq-~~elr~~L~k~~ 149 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYE-W-VLCQLACARAGLVLVNLN--PAYQ-SEELRYVLKKVG 149 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHH-H-HHHHHHHHHhceEEeccC--cccc-cHHHHHHHhhcC
Confidence 4455665533221 1222245799999999887775431 1 233455666777766664 4553 455666789999
Q ss_pred CcEEEehHHHH-----HHHHhcC-------CcccccCCCCCeeEEEEeCC
Q 004348 482 VTIFYTAPTLV-----RSLMRDG-------NEYVTRYSRKSLRVLGSVGE 519 (759)
Q Consensus 482 vT~l~~~Ps~l-----~~l~~~~-------~~~~~~~~l~sLr~v~~gGe 519 (759)
+.+++..|.+. +.|.+.. ....+...|+.|+++++.+|
T Consensus 150 ~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 150 CKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred eEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 99999988753 3343332 22345667899999998883
No 161
>PRK05934 type III secretion system protein; Validated
Probab=42.39 E-value=1.4e+02 Score=31.47 Aligned_cols=89 Identities=18% Similarity=0.134 Sum_probs=61.2
Q ss_pred Cc-EEEeCCeee----ccEeeCHHHHHHHHhcCCccceEEEEeE-ecCCCC-eEEEEEEE--EcCCCCCcHHHHHHHHHH
Q 004348 624 PG-YYFTGDGCS----SGHRIGTAEVESALVSHPQCAEAAVVGV-EHEVKG-QGIYAFVT--LVEGVPYSEELRKSLVLA 694 (759)
Q Consensus 624 ~g-~y~TGDl~~----~G~rI~~~eIE~~L~~~p~V~ea~Vv~~-~~~~~~-~~lva~Vv--~~~~~~~~~~l~~~l~~~ 694 (759)
+| |++--.+|. -+... =+|+++.|.+.++|..|.|-.. +++... +...|-|+ ++++...+++..+.|...
T Consensus 52 ~~~w~kl~~mG~sr~~E~~AL-EGELaRTIesld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV~gIvnL 130 (341)
T PRK05934 52 PGNWLKLSQLGNPKLIESLAK-KEQLEKDLTMFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLLHSITDY 130 (341)
T ss_pred CcceeehhhccChHHHHHHHH-HHHHHHHHHcccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHHHHHHHH
Confidence 44 777766665 11111 2489999999999999998544 433222 23334444 466666777778899999
Q ss_pred HHhhcCCCccccEEEEeCCC
Q 004348 695 VRKQIGAFAAPDKIHWAPGL 714 (759)
Q Consensus 695 l~~~Lp~~~vP~~iv~v~~l 714 (759)
+...+|. +-|..|.++|+-
T Consensus 131 VAsSVpG-LtpEnVTVVDq~ 149 (341)
T PRK05934 131 LTSSVPG-LTKEHITLSDNL 149 (341)
T ss_pred HHhcCCC-CCccCeEEECCC
Confidence 9999984 789999999973
No 162
>PRK07788 acyl-CoA synthetase; Validated
Probab=42.07 E-value=2.2e+02 Score=32.81 Aligned_cols=87 Identities=10% Similarity=-0.015 Sum_probs=61.5
Q ss_pred EEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCc
Q 004348 406 LHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (759)
Q Consensus 406 ~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT 483 (759)
.+|.+.+.... ....-...++.++|++...++-+... +..+++.+..|+..+..+.. ...+++..++++.+++
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~ 148 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGF--VLALYAAGKVGARIILLNTG---FSGPQLAEVAAREGVK 148 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCCEEEEeCCC---CCHHHHHHHHHhcCCc
Confidence 46766633221 11112235788999998887766543 45678899999999988653 3788999999999999
Q ss_pred EEEehHHHHHHHHh
Q 004348 484 IFYTAPTLVRSLMR 497 (759)
Q Consensus 484 ~l~~~Ps~l~~l~~ 497 (759)
.+.+.+.....+..
T Consensus 149 ~ii~~~~~~~~~~~ 162 (549)
T PRK07788 149 ALVYDDEFTDLLSA 162 (549)
T ss_pred EEEECchhHHHHHh
Confidence 99988876665543
No 163
>PLN03051 acyl-activating enzyme; Provisional
Probab=41.65 E-value=1.7e+02 Score=33.21 Aligned_cols=96 Identities=13% Similarity=0.020 Sum_probs=63.8
Q ss_pred CCeEEEEEEcC-CCC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChH-HHHHHHHHHHhCCeEEecCCC
Q 004348 215 GDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAG 290 (759)
Q Consensus 215 pd~~Al~~~~~-~~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e-~iva~LA~~kaGav~vpldp~ 290 (759)
|+.+|++...+ ..| .+-.+|++.+...+... ....++.++|++...+|-+-. .+..+++++..|+..+..+..
T Consensus 118 ~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~ 194 (499)
T PLN03051 118 VESVTNILFSSGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGA 194 (499)
T ss_pred ccceEEEEeCCCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCC
Confidence 45566654322 222 23467887765543322 234578899988777764432 124577888999988777655
Q ss_pred CCHHHHHHHHHhcCCeEEEEeCC
Q 004348 291 FSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 291 ~~~~~l~~il~~~~~~~iit~~~ 313 (759)
+..+++...+++.++.++.....
T Consensus 195 ~~~~~~~~~i~~~~vt~~~~vP~ 217 (499)
T PLN03051 195 PLGRGFGKFVQDAGVTVLGLVPS 217 (499)
T ss_pred CCcHHHHHHHHHhCCcEEEeCHH
Confidence 66788999999999999987654
No 164
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=41.16 E-value=1e+02 Score=34.98 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=62.7
Q ss_pred CCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCccccc
Q 004348 426 YKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTR 505 (759)
Q Consensus 426 l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~ 505 (759)
+.+||+++.-.|.++.+- .++ -..|..++-++-+..-.+++.+-+.++++++..++++|++ +.
T Consensus 176 ~~pGd~v~vE~PtY~~~~---~~~--~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~-----qN------- 238 (459)
T COG1167 176 LDPGDTVLVEDPTYPGAL---QAL--EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF-----QN------- 238 (459)
T ss_pred CCCCCEEEEcCCCcHHHH---HHH--HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC-----CC-------
Confidence 458999999888776432 233 2478888877655555699999999999999999999973 11
Q ss_pred CCCCCeeEEEEeCCCCCHHHHHHHHHHhCCCCccEe
Q 004348 506 YSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPIS 541 (759)
Q Consensus 506 ~~l~sLr~v~~gGe~l~~~~~~~~~~~~g~~~~~l~ 541 (759)
| .|..++.+-.+++.+..-..++.|+
T Consensus 239 ---P-------tG~tms~~rR~~Ll~lA~~~~~~II 264 (459)
T COG1167 239 ---P-------TGVTMSLERRKALLALAEKYDVLII 264 (459)
T ss_pred ---C-------CCCccCHHHHHHHHHHHHHcCCeEE
Confidence 2 3778888877776654322234444
No 165
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=40.06 E-value=1.9e+02 Score=34.03 Aligned_cols=97 Identities=13% Similarity=-0.020 Sum_probs=64.8
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.++.+|++ +.+..+|. .-.+|.+.+.... +...-...++.++|++...++-+... +..+++.+..|+..+...
T Consensus 66 ~p~~~A~~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALI-AVSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA--AFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeC
Confidence 45667765 43322332 2346777643221 12222346899999999998877654 456788889999888775
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~P 489 (759)
.. ..++.+...|++.++.++++..
T Consensus 141 ~~---~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GG---FASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CC---CCHHHHHHHHHhcCCcEEEEcc
Confidence 43 4788999999999999888754
No 166
>PRK09274 peptide synthase; Provisional
Probab=38.79 E-value=2.4e+02 Score=32.45 Aligned_cols=100 Identities=9% Similarity=-0.079 Sum_probs=63.5
Q ss_pred CCCCcEEEEeccCCC-CCCcEEEEccchHHHHHH--HHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGST-GKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGST-G~PKgV~~th~~~l~~~~--~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.|+.+|++....+++ ...+-..+|.+.+..... ...-...+++++|++....+-+... ...+++.+..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEc
Confidence 356666654332221 112222467776332221 1112235889999999888776654 45678888999998887
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEehH
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~P 489 (759)
+.. ...+++..++++.++..+...+
T Consensus 97 ~~~---~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPG---MGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCC---ccHHHHHHHHHhcCCCEEEecc
Confidence 643 3678899999999999887754
No 167
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=38.43 E-value=4.7e+02 Score=31.11 Aligned_cols=122 Identities=12% Similarity=0.025 Sum_probs=73.7
Q ss_pred CCCCcEEEEe--ccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEE
Q 004348 385 DAEDPLFLLY--TSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (759)
Q Consensus 385 ~~~d~a~Iiy--TSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl 460 (759)
.++.+|+..- ..|..|.- ..+|.+.+.... +...-...++.++|++...++-.... ....++.+..|+..+.
T Consensus 55 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew--~~~~lA~~~~G~v~vp 130 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW--IVAMEACAAHSLICVP 130 (660)
T ss_pred CCCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEE
Confidence 3566665432 23333322 235666533222 11222346899999988887766543 3457888999998887
Q ss_pred ecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHhcCCcccccCCCCCeeEEEEeC
Q 004348 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMRDGNEYVTRYSRKSLRVLGSVG 518 (759)
Q Consensus 461 ~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~~~~~~~~~~~l~sLr~v~~gG 518 (759)
.... ..++.+..+++..+++++++....+..++.... ...+.++.+++-.
T Consensus 131 l~~~---~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~-----~~~~~l~~ii~~~ 180 (660)
T PLN02430 131 LYDT---LGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDC-----KSAKRLKAIVSFT 180 (660)
T ss_pred eccC---CCHHHHHHHHhccCCCEEEECHHHHHHHHhhhc-----ccCCCceEEEEEC
Confidence 7543 478999999999999999887764443332211 1234566666543
No 168
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=37.84 E-value=2.4e+02 Score=31.06 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=64.2
Q ss_pred CCeEEEEEEcC-CCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh-HHHHHHHHHHHhCCeEEecCCC
Q 004348 215 GDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFAG 290 (759)
Q Consensus 215 pd~~Al~~~~~-~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~-e~iva~LA~~kaGav~vpldp~ 290 (759)
++.+|++...+ ..|. ...+|++.+...+..++.. .+++++|++...++-.. -.+..+++.+..|+..+..++.
T Consensus 110 ~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 186 (436)
T TIGR01923 110 MDQIATLMFTSGTTGKPKAVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF 186 (436)
T ss_pred cCceEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH
Confidence 45566654422 2222 3578999998877766654 47999999988876532 2233567888999987776543
Q ss_pred CCHHHHHHHHHhcCCeEEEEeCC
Q 004348 291 FSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 291 ~~~~~l~~il~~~~~~~iit~~~ 313 (759)
+++...+++.++.++.+...
T Consensus 187 ---~~~~~~l~~~~~t~~~~~P~ 206 (436)
T TIGR01923 187 ---NQLLEMIANERVTHISLVPT 206 (436)
T ss_pred ---HHHHHHHHHhCCeEEEeHHH
Confidence 48888999999999987554
No 169
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=37.77 E-value=2.4e+02 Score=30.97 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=44.0
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHH
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v 327 (759)
+++||.|.+..+.-......+-...+.+++-+.+......+.+...++. +.++|+.+......+...++..+.
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~ 159 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKIC 159 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHH
Confidence 6789987665554433333333445555554554444567777777753 678888876665556666665543
No 170
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=37.54 E-value=2e+02 Score=33.75 Aligned_cols=98 Identities=11% Similarity=-0.062 Sum_probs=66.2
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.++.+|.+.. ...+|. ...+|.+.+.... ....-...++.++|++...++-+... +..+++.+..|+..+..+
T Consensus 70 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWE-GDEPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 4677776643 221232 3457777643222 11122346899999999998877654 456788889999988775
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps 490 (759)
.. ..++.+...+++.+++++.+...
T Consensus 145 ~~---~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GG---FSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CC---CCHHHHHHHHHhcCCCEEEEcCc
Confidence 43 47889999999999998887653
No 171
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=36.54 E-value=2.9e+02 Score=31.97 Aligned_cols=97 Identities=15% Similarity=0.024 Sum_probs=65.9
Q ss_pred CCCeEEEEEE-cCCCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChH--HHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWE-ANDPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~-~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e--~iva~LA~~kaGav~vpld 288 (759)
.++.+|++.. +...|. .-.+|++.+...+.. .....+++++|++...++.... ....+++.+..|+..+...
T Consensus 203 ~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~ 279 (570)
T PRK04319 203 DREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDG 279 (570)
T ss_pred CCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEEC
Confidence 3455666543 222222 346788887654433 3344578899987666654432 2456778889999877777
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 289 p~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
..+.++++...+++.++.++.....
T Consensus 280 ~~~~~~~~~~~i~~~~~t~~~~~P~ 304 (570)
T PRK04319 280 GRFSPERWYRILEDYKVTVWYTAPT 304 (570)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCHH
Confidence 7788999999999999999887654
No 172
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=36.54 E-value=2.2e+02 Score=32.23 Aligned_cols=86 Identities=14% Similarity=0.090 Sum_probs=61.0
Q ss_pred EEccchHHHHH---HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 406 LHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 406 ~~th~~~l~~~---~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
.+|.+.+.... ...+ ...++.++|++....+-++.. ...+++.+..|+..+..+.. ..++.+..++++.++
T Consensus 25 ~~ty~~l~~~v~~~a~~l-~~~g~~~~~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~---~~~~~~~~~l~~~~~ 98 (515)
T TIGR03098 25 TLTYAALSERVLALASGL-RGLGLARGERVAIYLDKRLET--VTAMFGAALAGGVFVPINPL---LKAEQVAHILADCNV 98 (515)
T ss_pred eeeHHHHHHHHHHHHHHH-HHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCEEEEeCCCC---CCHHHHHHHHHcCCC
Confidence 46777643221 2222 235788899999888877755 34678888999988877643 378999999999999
Q ss_pred cEEEehHHHHHHHHh
Q 004348 483 TIFYTAPTLVRSLMR 497 (759)
Q Consensus 483 T~l~~~Ps~l~~l~~ 497 (759)
+.++..+..+..+..
T Consensus 99 ~~~i~~~~~~~~~~~ 113 (515)
T TIGR03098 99 RLLVTSSERLDLLHP 113 (515)
T ss_pred eEEEEccchhhhhHh
Confidence 999888766655543
No 173
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=36.34 E-value=2.8e+02 Score=32.66 Aligned_cols=97 Identities=11% Similarity=-0.073 Sum_probs=66.3
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.++.+|++.... . ......+|.+.+... ...+. ...++.++|++...++-+... +..+++.+..|+..+..
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~-v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHRE-VCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHH-HHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEec
Confidence 467777664221 1 113456788874332 22222 236889999999988877654 45678889999998887
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEehHH
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps 490 (759)
+.. ..++.+...+++.++.++.+...
T Consensus 154 ~~~---~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 154 FGG---FSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCC---CCHHHHHHHHHhcCCcEEEEcCc
Confidence 643 37889999999999998887543
No 174
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=36.27 E-value=5.6e+02 Score=30.44 Aligned_cols=87 Identities=10% Similarity=-0.049 Sum_probs=61.3
Q ss_pred EEccchHHHHHH--HHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCc
Q 004348 406 LHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (759)
Q Consensus 406 ~~th~~~l~~~~--~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT 483 (759)
.+|.+.+..... ...-...++.++|++...++-+... +..+++.+..|+..+..... ..++.+..+|++-+++
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~~~ 151 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDT---LGANAVEFIINHAEVS 151 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCC---CCHHHHHHHHHcCCCC
Confidence 467776432221 1222345899999998888776543 45678889999998877643 3788999999999999
Q ss_pred EEEehHHHHHHHHh
Q 004348 484 IFYTAPTLVRSLMR 497 (759)
Q Consensus 484 ~l~~~Ps~l~~l~~ 497 (759)
++++....+..+..
T Consensus 152 ~v~~~~~~~~~~~~ 165 (660)
T PLN02861 152 IAFVQESKISSILS 165 (660)
T ss_pred EEEECHHHHHHHHH
Confidence 99887766655543
No 175
>PLN03052 acetate--CoA ligase; Provisional
Probab=36.15 E-value=2.6e+02 Score=33.78 Aligned_cols=100 Identities=12% Similarity=0.065 Sum_probs=67.0
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.++.+|.+.-..+.-|.+ ...+|.+.+.... +...-...++.++|++...++-+..+ +..+++.+..|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 356677654332221222 2346777633222 12222346899999999999877654 456788899999988886
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps 490 (759)
.. +.++.+...+++-++.++++...
T Consensus 265 p~---~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 265 DS---FAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CC---CCHHHHHHHHHhcCceEEEEcCc
Confidence 43 48899999999999999888654
No 176
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=35.53 E-value=3.2e+02 Score=32.80 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=65.4
Q ss_pred CCCeEEEEEEcC-CCC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--ChHHHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~e~iva~LA~~kaGav~vpld 288 (759)
.+|.+|++...+ ..| .+-.+|++.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 456666655422 222 2457899888776655543 3478999999888875 3445567888899999877665
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEeC
Q 004348 289 AGFSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 289 p~~~~~~l~~il~~~~~~~iit~~ 312 (759)
.......+...+.+.++.++....
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchH
Confidence 444556777788888888877543
No 177
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=35.08 E-value=1.2e+02 Score=33.37 Aligned_cols=73 Identities=16% Similarity=0.112 Sum_probs=44.7
Q ss_pred HHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCCeEEEEeCCcccCCccc
Q 004348 247 NYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAI 321 (759)
Q Consensus 247 ~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~-----~~~~~l~~il~~~~~~~iit~~~~~~~~~~~ 321 (759)
..++.+++++||.|.+-.+ .+.....++...|+.+++++.+ ...+.++..+.. +.++|+.... .+...
T Consensus 61 ~~l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~~---~G~~~ 133 (376)
T TIGR02379 61 MAALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPVHY---AGVAC 133 (376)
T ss_pred HHHHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEeCC---CCCcc
Confidence 3445668999999877443 4555556677889866666533 356677776653 6777764432 34444
Q ss_pred chHHH
Q 004348 322 HLKDI 326 (759)
Q Consensus 322 ~~~~~ 326 (759)
++.++
T Consensus 134 d~~~I 138 (376)
T TIGR02379 134 DMDTI 138 (376)
T ss_pred CHHHH
Confidence 55443
No 178
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=33.70 E-value=2.6e+02 Score=32.08 Aligned_cols=97 Identities=9% Similarity=-0.031 Sum_probs=65.0
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHH---HHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTF---KYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~---~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.|+.+|++..- ++.++...+|.+.+. .....+ -...++.++|++...++-+... +..+++.+..|+..+..
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~-~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl 110 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELA-ALVDRVAVGLARLGVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPL 110 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHH-HHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEecc
Confidence 35667765432 223334467777743 222222 2235899999999988877654 45678888999998776
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEehHH
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPT 490 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps 490 (759)
+.. ...+.+..+++..+++.+.+...
T Consensus 111 ~~~---~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 111 MPI---FRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccc---cCHHHHHHHHHhcCceEEEEecc
Confidence 543 36788999999999998876553
No 179
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=33.19 E-value=2.8e+02 Score=30.56 Aligned_cols=72 Identities=14% Similarity=0.279 Sum_probs=45.2
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHH
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v 327 (759)
+++||.|.+..+.-....-.+-.+.+.|+.+..++++ .+.++..++..+.++|+.+......+...++..+.
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~ 160 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVA 160 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEECCCCCCCEecCHHHHH
Confidence 6799998876554444333332334567766555553 57777777655788898876655555666665543
No 180
>PRK05939 hypothetical protein; Provisional
Probab=33.10 E-value=2.5e+02 Score=31.07 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=46.0
Q ss_pred HHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHH
Q 004348 247 NYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDI 326 (759)
Q Consensus 247 ~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~ 326 (759)
..|..+ +++||.|.+.-+--......+-++.+.|+.+..++.. ..+.++..+. -+.++|+.+......+...+++.+
T Consensus 77 ~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I 153 (397)
T PRK05939 77 AVFLTL-LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGI 153 (397)
T ss_pred HHHHHH-cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHH
Confidence 334444 7899998775432223333334456789888777763 5677777774 467888876544444444444443
Q ss_pred H
Q 004348 327 V 327 (759)
Q Consensus 327 v 327 (759)
.
T Consensus 154 ~ 154 (397)
T PRK05939 154 G 154 (397)
T ss_pred H
Confidence 3
No 181
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=33.03 E-value=3.1e+02 Score=30.78 Aligned_cols=79 Identities=13% Similarity=0.210 Sum_probs=50.2
Q ss_pred HHHHHHcCCCCCCEEEEEcCCChHHHHHHH--HHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccch
Q 004348 246 ANYLKDIGVKKGDAVIIYLPMLMELPIAML--ACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHL 323 (759)
Q Consensus 246 A~~L~~~Gv~~gd~Vai~~~~s~e~iva~L--A~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~ 323 (759)
...|..+ +++||.|.+ .++....-..++ .+.+.|+....++.....+.++..++. +.++|+.........+..++
T Consensus 90 ~~al~al-l~~GD~VI~-~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di 166 (432)
T PRK06702 90 MLAVLNI-CSSGDHLLC-SSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAESLGNPAMNVLNF 166 (432)
T ss_pred HHHHHHh-cCCCCEEEE-CCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCH
Confidence 3344444 789998766 334443223332 357889999999987788889888865 67888876544444444455
Q ss_pred HHHH
Q 004348 324 KDIV 327 (759)
Q Consensus 324 ~~~v 327 (759)
..+.
T Consensus 167 ~~I~ 170 (432)
T PRK06702 167 KEFS 170 (432)
T ss_pred HHHH
Confidence 4443
No 182
>PLN02654 acetate-CoA ligase
Probab=33.00 E-value=2.8e+02 Score=33.08 Aligned_cols=97 Identities=9% Similarity=-0.040 Sum_probs=65.7
Q ss_pred CCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecC
Q 004348 386 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (759)
Q Consensus 386 ~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~ 463 (759)
++.+|++ |.....| ....+|.+.+.... +...-...+++++|++...++-.... +..+++++..|+..+.+..
T Consensus 103 ~~~~Al~-~~~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 103 GDKIAIY-WEGNEPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCEEEE-EEcCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecCC
Confidence 5566654 4221111 13457877743322 12222347899999999998877654 4567889999999888764
Q ss_pred CCCCCChhHHHHHHHHcCCcEEEehHH
Q 004348 464 APTYPDSGRSWDIVDKYKVTIFYTAPT 490 (759)
Q Consensus 464 ~~~~~d~~~l~~~i~~~~vT~l~~~Ps 490 (759)
. +.++.+...|++.++.++.+...
T Consensus 178 ~---~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 178 G---FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred C---CCHHHHHHHHHhcCceEEEEcCc
Confidence 3 47899999999999998887654
No 183
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=32.97 E-value=1.8e+02 Score=31.69 Aligned_cols=73 Identities=16% Similarity=0.088 Sum_probs=55.6
Q ss_pred HHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 418 TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 418 ~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
..+....++.++|++....+-.... ...+++.+..|+.++..+.. ...+.+..++++.+++.+...+.....+
T Consensus 14 ~~l~~~~g~~~gd~v~l~~~n~~~~--~~~~~a~~~~G~~~v~~~~~---~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 14 RHLRAAGGVGPGDRVAVLLERSAEL--VVAILAVLKAGAAYVPLDPA---YPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred HHHHHhhCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEEcCCC---CCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 3333336789999998888877543 45678888999998887643 3778899999999999999888766554
No 184
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.55 E-value=2.5e+02 Score=32.60 Aligned_cols=88 Identities=10% Similarity=-0.025 Sum_probs=62.1
Q ss_pred EEEccchHHHH---HHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 405 VLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 405 V~~th~~~l~~---~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
-.+|.+.+... ....+....++.++|++...++-+... +..+++.+..|+..+..+.. ..++.+..+++..+
T Consensus 37 ~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~ 111 (576)
T PRK05620 37 EQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH--LEVLFAVACMGAVFNPLNKQ---LMNDQIVHIINHAE 111 (576)
T ss_pred EEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCCEEeecccc---cCHHHHHHHHhccC
Confidence 45676663322 222222236888999998888877654 35678888999988887643 36789999999999
Q ss_pred CcEEEehHHHHHHHHh
Q 004348 482 VTIFYTAPTLVRSLMR 497 (759)
Q Consensus 482 vT~l~~~Ps~l~~l~~ 497 (759)
++.+.+.+.....+..
T Consensus 112 ~~~~i~~~~~~~~~~~ 127 (576)
T PRK05620 112 DEVIVADPRLAEQLGE 127 (576)
T ss_pred CcEEEEChhhHHHHHH
Confidence 9999988876665543
No 185
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=32.29 E-value=3e+02 Score=32.67 Aligned_cols=94 Identities=12% Similarity=-0.009 Sum_probs=63.5
Q ss_pred CCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCC
Q 004348 387 EDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGA 464 (759)
Q Consensus 387 ~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~ 464 (759)
+++|.+... .+|. ...+|.+.+.... +...-...++.++|++...++-+... +..+++++..|+..+.+...
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~~ 172 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSPD 172 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCCC
Confidence 455655432 2232 2457777643222 11222346899999999999887654 45678889999998887643
Q ss_pred CCCCChhHHHHHHHHcCCcEEEehH
Q 004348 465 PTYPDSGRSWDIVDKYKVTIFYTAP 489 (759)
Q Consensus 465 ~~~~d~~~l~~~i~~~~vT~l~~~P 489 (759)
..++.+...|++.++.++++..
T Consensus 173 ---~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 173 ---FGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred ---CCHHHHHHHHHhcCCcEEEEcc
Confidence 4788999999999999888754
No 186
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=32.19 E-value=1.5e+02 Score=32.35 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=39.7
Q ss_pred HHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCC--C---CCHHHHHHHHHhcCCeEEEEe
Q 004348 248 YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA--G---FSSDSLAQRIMDCKPKVVITS 311 (759)
Q Consensus 248 ~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp--~---~~~~~l~~il~~~~~~~iit~ 311 (759)
.|...++++||.|.+-.+. +.....++...|+.++.++. + ...+.++..+.. +.++|+..
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3445578999998775544 44445567788987666653 3 457788877754 67777754
No 187
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=32.05 E-value=3.8e+02 Score=30.31 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=68.5
Q ss_pred CCCeEEEEEEcCC-CC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChH--HHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWEAND-PG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME--LPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~~~~-~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e--~iva~LA~~kaGav~vpld 288 (759)
.++.+|.+..... .| ..-.+|++.+...+.... ....+++++|++...+|.... +...+++.+..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 4567777654321 12 245678888876553322 244589999998877775543 4456677888999888777
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 289 p~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
+......+...|++.++.++.....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~ 261 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPT 261 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchH
Confidence 7778899999999999999987654
No 188
>PRK13383 acyl-CoA synthetase; Provisional
Probab=32.00 E-value=2.2e+02 Score=32.35 Aligned_cols=68 Identities=12% Similarity=0.017 Sum_probs=53.7
Q ss_pred hCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHH
Q 004348 424 FDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (759)
Q Consensus 424 ~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~ 496 (759)
.++.++|++...++-+... +..+++.+..|+..+..+.. ...+.+..++++.+++.+.+.+.....+.
T Consensus 80 ~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~---~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 147 (516)
T PRK13383 80 DGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTE---FRSDALAAALRAHHISTVVADNEFAERIA 147 (516)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCcc---CCHHHHHHHHhcCCCCEEEEchhHHHHHH
Confidence 5789999998888766543 45678888999999888643 47899999999999999998877665543
No 189
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=31.89 E-value=3.2e+02 Score=29.71 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=24.7
Q ss_pred hHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 445 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 445 ~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
.+.+..+|+.|.++++-+..........+.+++.+..
T Consensus 110 ~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag 146 (367)
T cd06534 110 AWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAG 146 (367)
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcC
Confidence 4567789999999988765433334455666666654
No 190
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=31.80 E-value=5.2e+02 Score=28.19 Aligned_cols=69 Identities=19% Similarity=0.236 Sum_probs=42.4
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEec--CCC--CCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHH
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVV--FAG--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 325 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpl--dp~--~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~ 325 (759)
+++||.|.+..|.-. .....+...|+-.+.+ +.+ ...+.+...+...++++|+.+......+...+..+
T Consensus 124 ~~~gd~Vlv~~P~y~---~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~ 196 (380)
T PLN03026 124 LDPGDKIIDCPPTFG---MYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDD 196 (380)
T ss_pred cCCCCEEEEcCCChH---HHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHH
Confidence 568999888776533 2223345578755444 332 45677777776668888887765555555555433
No 191
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=31.61 E-value=1.2e+02 Score=28.03 Aligned_cols=41 Identities=15% Similarity=0.045 Sum_probs=32.1
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCC---ChHHHHHHHHHHHhCC
Q 004348 242 VCQLANYLKDIGVKKGDAVIIYLPM---LMELPIAMLACARIGA 282 (759)
Q Consensus 242 a~~lA~~L~~~Gv~~gd~Vai~~~~---s~e~iva~LA~~kaGa 282 (759)
..+++..|.++||.+++.|.+++.. +.....+.+++-.+|.
T Consensus 80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~ 123 (138)
T cd01445 80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGH 123 (138)
T ss_pred HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCC
Confidence 3577888999999999999999975 5556666667777775
No 192
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=31.55 E-value=3.6e+02 Score=28.63 Aligned_cols=61 Identities=20% Similarity=0.261 Sum_probs=40.4
Q ss_pred HHcC-CCCCCEEEEEcCCChHHHHHHHHHHHhCC-eEEecCCCCCHHHHHHHHHhcCCeEEEEeC
Q 004348 250 KDIG-VKKGDAVIIYLPMLMELPIAMLACARIGA-VHSVVFAGFSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 250 ~~~G-v~~gd~Vai~~~~s~e~iva~LA~~kaGa-v~vpldp~~~~~~l~~il~~~~~~~iit~~ 312 (759)
.+.| ++||++|.=-..-+.-.-.||+|.. .|. ..+.++..++.++ +.+|+..++.++++..
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~-~Gy~~iivmP~~~S~er-~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAA-KGYRLIIVMPETMSQER-RKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHH-cCCcEEEEeCCCCCHHH-HHHHHHcCCEEEEcCC
Confidence 4456 9999955444444444455555544 565 4455556666665 6788999999999987
No 193
>PLN02614 long-chain acyl-CoA synthetase
Probab=31.31 E-value=4.2e+02 Score=31.60 Aligned_cols=70 Identities=11% Similarity=0.003 Sum_probs=54.8
Q ss_pred HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHh
Q 004348 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 497 (759)
Q Consensus 423 ~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~ 497 (759)
..++.++|++...++-+... +...++.+..|+..+..... ..++++..+|++.+++++++....+..+..
T Consensus 98 ~~Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~---~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 167 (666)
T PLN02614 98 SVGVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVPLYDT---LGAGAVEFIISHSEVSIVFVEEKKISELFK 167 (666)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEEecCC---CCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 46899999998888766543 45678889999998887643 478899999999999999988776655543
No 194
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=30.88 E-value=3.3e+02 Score=32.22 Aligned_cols=96 Identities=9% Similarity=-0.058 Sum_probs=65.0
Q ss_pred CCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecC
Q 004348 386 AEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEG 463 (759)
Q Consensus 386 ~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~ 463 (759)
++.+|++.... .|. ...+|.+.+.... +...-...++.++|++...++-+... +..+++.+..|+..+.++.
T Consensus 98 ~~~~Al~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 98 DDRPAIIFRGE--DGP--RRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCeEEEEECC--CCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeCC
Confidence 56677654322 221 2457777643222 11122346899999999998877654 4567888999999888764
Q ss_pred CCCCCChhHHHHHHHHcCCcEEEehHH
Q 004348 464 APTYPDSGRSWDIVDKYKVTIFYTAPT 490 (759)
Q Consensus 464 ~~~~~d~~~l~~~i~~~~vT~l~~~Ps 490 (759)
. ..++.+...|+..++.++.+...
T Consensus 172 ~---~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 D---FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred C---CCHHHHHHHHHHcCCcEEEEccc
Confidence 3 37889999999999998887653
No 195
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=30.83 E-value=6.3e+02 Score=27.12 Aligned_cols=69 Identities=25% Similarity=0.312 Sum_probs=42.2
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCe--EEecCCC--CCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHH
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAV--HSVVFAG--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKD 325 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav--~vpldp~--~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~ 325 (759)
+++||.|++-.|.-. ....++...|+- .++++.+ ...+.+...+...++++|+........+...+..+
T Consensus 97 ~~~gd~Vlv~~p~y~---~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~ 169 (351)
T PRK14807 97 INKGDVVIYPHPSFA---MYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERED 169 (351)
T ss_pred cCCCCEEEEeCCChH---HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHH
Confidence 578999987655322 233345567774 4445543 45678888777667888887655444455555433
No 196
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=30.77 E-value=3.5e+02 Score=30.70 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=53.1
Q ss_pred HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 423 ~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
..++.++|++....+-+... ...+++.+..|+..+..+.. ..++.+..++++.+++.++..+.....+
T Consensus 56 ~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 56 SLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPINAR---LLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcCcc---cCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 36889999999888877654 35677888899988877543 3789999999999999998877655443
No 197
>TIGR02544 III_secr_YscJ type III secretion apparatus lipoprotein, YscJ/HrcJ family. All members of this protein family are predicted lipoproteins with a conserved Cys near the N-terminus for cleavage and modification, and are part of known or predicted type III secretion systems. Members are found in both plant and animal pathogens, including the obligately intracellular chlamydial species and (non-pathogenic) root nodule bacteria. The most closely related proteins outside this family are examples of the flagellar M-ring protein FliF.
Probab=30.39 E-value=2.7e+02 Score=27.41 Aligned_cols=69 Identities=17% Similarity=0.154 Sum_probs=46.3
Q ss_pred HHHHHHHHhcCCccceEEEEeE-ecCC------CCeEEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEe
Q 004348 641 TAEVESALVSHPQCAEAAVVGV-EHEV------KGQGIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWA 711 (759)
Q Consensus 641 ~~eIE~~L~~~p~V~ea~Vv~~-~~~~------~~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v 711 (759)
-+|+++.|..+++|.+|-|... |... .....-.++.++++...+. ..+.|+..+...+|.. -|..|-++
T Consensus 109 e~EL~rtI~~i~~V~~ArVhl~~P~~~~f~~~~~~~sASV~l~~~~g~~l~~-qv~~I~~LVa~SV~~L-~~enVtVv 184 (193)
T TIGR02544 109 EQRLEQTLSQIDGVISARVHVVLPENDNNGRPKKPSSASVFIKYRPGLNLDA-LIPKIKRLVANSIPGL-DYDNVSVV 184 (193)
T ss_pred HHHHHHHHHhcCCeeeeEEEEECCCCCcccccCCCCcEEEEEEeCCCCCcHH-HHHHHHHHHHHhcCCC-CccceEEE
Confidence 4699999999999999998654 3221 1113344555566654433 5788999999998854 56665554
No 198
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=29.94 E-value=73 Score=26.46 Aligned_cols=47 Identities=23% Similarity=0.365 Sum_probs=24.8
Q ss_pred eEEEEEEcCCCCcceeeeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEcCCC
Q 004348 217 KVAIYWEANDPGVDATLTYSQLLQ-QVCQLANYLKDIGVKKGDAVIIYLPML 267 (759)
Q Consensus 217 ~~Al~~~~~~~~~~~~lTY~eL~~-~a~~lA~~L~~~Gv~~gd~Vai~~~~s 267 (759)
-+|++|++.--|-.=+++=.|+.+ +.++++.+|+++||+ |-+-..+|
T Consensus 15 ~I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 15 WIAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp EEEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 478888732101111233467776 999999999998764 55555444
No 199
>PRK13388 acyl-CoA synthetase; Provisional
Probab=29.41 E-value=4.3e+02 Score=30.35 Aligned_cols=84 Identities=10% Similarity=-0.082 Sum_probs=58.9
Q ss_pred EEccchHHHHHHHHHH---HHhCC-CCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 406 LHTTGGYMVHTATTFK---YAFDY-KPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 406 ~~th~~~l~~~~~~~~---~~~~l-~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
.+|...+... ..... ...++ .++|++...++-+... +..+++++..|+..+..+.. ...+.+..++++.+
T Consensus 26 ~lTy~el~~~-~~~la~~L~~~g~~~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~p~---~~~~~l~~~l~~~~ 99 (540)
T PRK13388 26 TWTWREVLAE-AAARAAALIALADPDRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLNTT---RRGAALAADIRRAD 99 (540)
T ss_pred eeeHHHHHHH-HHHHHHHHHHhcCCCCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEeccc---CChHHHHHHHHhcC
Confidence 5777774322 22222 23567 6889998888877654 45678888999999888643 36788999999999
Q ss_pred CcEEEehHHHHHHH
Q 004348 482 VTIFYTAPTLVRSL 495 (759)
Q Consensus 482 vT~l~~~Ps~l~~l 495 (759)
++++.+.......+
T Consensus 100 ~~~~i~~~~~~~~~ 113 (540)
T PRK13388 100 CQLLVTDAEHRPLL 113 (540)
T ss_pred CCEEEEChhhhHHH
Confidence 99988876655443
No 200
>PRK05852 acyl-CoA synthetase; Validated
Probab=29.41 E-value=5.5e+02 Score=29.30 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=58.0
Q ss_pred ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh--HHHHHHHHHHHhCCeEE-ecCCCCCHHHHHHHHHhcCCe
Q 004348 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM--ELPIAMLACARIGAVHS-VVFAGFSSDSLAQRIMDCKPK 306 (759)
Q Consensus 230 ~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~--e~iva~LA~~kaGav~v-pldp~~~~~~l~~il~~~~~~ 306 (759)
.-.+|+..+...+..+.. ..+++++|++...+|... .++..+++++..|+..+ |-...+.+.++...+++.++.
T Consensus 193 gv~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t 269 (534)
T PRK05852 193 MVPWTHANIASSVRAIIT---GYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGAT 269 (534)
T ss_pred EEEecHHHHHHHHHHHHH---HhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCc
Confidence 345788888776665554 346889998888877543 45567888888887543 333457788899999999999
Q ss_pred EEEEeCC
Q 004348 307 VVITSNA 313 (759)
Q Consensus 307 ~iit~~~ 313 (759)
.++....
T Consensus 270 ~~~~~P~ 276 (534)
T PRK05852 270 WYTAVPT 276 (534)
T ss_pred EEEcChH
Confidence 8887654
No 201
>PLN03102 acyl-activating enzyme; Provisional
Probab=29.27 E-value=3.3e+02 Score=31.69 Aligned_cols=84 Identities=12% Similarity=0.033 Sum_probs=59.1
Q ss_pred EEccchHHHHHHHHHH---HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 406 LHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 406 ~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
.+|.+.+ ......+. ...++.++|++...++-.... ...+|+.+..|++++..+.. .+++.+..+|+..++
T Consensus 39 ~~Ty~eL-~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~--~~~~la~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~ 112 (579)
T PLN03102 39 RFTWPQT-YDRCCRLAASLISLNITKNDVVSVLAPNTPAM--YEMHFAVPMAGAVLNPINTR---LDATSIAAILRHAKP 112 (579)
T ss_pred EEEHHHH-HHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHhcCcEEeecccc---CCHHHHHHHHhccCC
Confidence 4666663 22222222 235889999998888766543 45678888899988877643 488999999999999
Q ss_pred cEEEehHHHHHHH
Q 004348 483 TIFYTAPTLVRSL 495 (759)
Q Consensus 483 T~l~~~Ps~l~~l 495 (759)
+.+.+.+.....+
T Consensus 113 ~~ii~~~~~~~~~ 125 (579)
T PLN03102 113 KILFVDRSFEPLA 125 (579)
T ss_pred eEEEEChhhHHHH
Confidence 9998877655443
No 202
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=29.03 E-value=3.7e+02 Score=29.95 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=26.7
Q ss_pred hHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 445 SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 445 ~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
.+.+..+|+.|.++++-+..........+.+++++..
T Consensus 114 ~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag 150 (432)
T cd07078 114 AWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAG 150 (432)
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcC
Confidence 4567789999999998765543335567788888755
No 203
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=28.91 E-value=5.7e+02 Score=25.13 Aligned_cols=88 Identities=14% Similarity=0.038 Sum_probs=49.8
Q ss_pred EEEEecCc--chhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHH------HHHHHhcCCcc
Q 004348 431 VYWCTADC--GWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTL------VRSLMRDGNEY 502 (759)
Q Consensus 431 ~~l~~~~l--~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~------l~~l~~~~~~~ 502 (759)
+++..+.. .|+.|.......--..|-.++..... .+++.+.+.++++++.++.++-++ ++.+.+..
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~---vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l--- 159 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRD---VPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKL--- 159 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCC---CCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHH---
Confidence 45554444 57776433222222467777766432 378999999999999987665321 12222221
Q ss_pred cccCCC-CCeeEEEEeCCCCCHHHH
Q 004348 503 VTRYSR-KSLRVLGSVGEPINPSAW 526 (759)
Q Consensus 503 ~~~~~l-~sLr~v~~gGe~l~~~~~ 526 (759)
+...+ +.+ .+++||.+++++..
T Consensus 160 -~~~~~~~~v-~i~vGG~~~~~~~~ 182 (197)
T TIGR02370 160 -KEEGYRDSV-KFMVGGAPVTQDWA 182 (197)
T ss_pred -HHcCCCCCC-EEEEEChhcCHHHH
Confidence 11111 223 47889999987643
No 204
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=28.83 E-value=2.9e+02 Score=31.98 Aligned_cols=90 Identities=10% Similarity=-0.053 Sum_probs=66.3
Q ss_pred EEEEccchHHHHHHHHHHHHh----CCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHH
Q 004348 404 GVLHTTGGYMVHTATTFKYAF----DYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDK 479 (759)
Q Consensus 404 gV~~th~~~l~~~~~~~~~~~----~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~ 479 (759)
|..+|++.+............ +++.+|++...+|-+..+. ...++.++.|+.+.-... . .+...+...++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np--~-~~~~ei~~~~~~ 117 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNP--R-LTASEIAKQLKD 117 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCc--c-cCHHHHHHHHHh
Confidence 788998875443332222222 3688999999999887653 456788899998777653 3 489999999999
Q ss_pred cCCcEEEehHHHHHHHHhc
Q 004348 480 YKVTIFYTAPTLVRSLMRD 498 (759)
Q Consensus 480 ~~vT~l~~~Ps~l~~l~~~ 498 (759)
-+.+++++....+..+...
T Consensus 118 s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 118 SKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred cCCeEEEEcCchHHHHHHH
Confidence 9999999988777776554
No 205
>PRK06839 acyl-CoA synthetase; Validated
Probab=28.70 E-value=3.2e+02 Score=30.67 Aligned_cols=86 Identities=8% Similarity=-0.054 Sum_probs=60.9
Q ss_pred EEEccchHHHHH---HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 405 VLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 405 V~~th~~~l~~~---~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
..+|.+.+.... ........++.+++++...++-+... +..+++.+..|+..+..+.. ..++.+...+++.+
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~~~~~---~~~~~~~~~l~~~~ 100 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY--IVLLFAIAKVECIAVPLNIR---LTENELIFQLKDSG 100 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecCcc---cCHHHHHHHHHhcC
Confidence 457777743222 22222235788999998888777553 45678888899988887643 37788899999999
Q ss_pred CcEEEehHHHHHHH
Q 004348 482 VTIFYTAPTLVRSL 495 (759)
Q Consensus 482 vT~l~~~Ps~l~~l 495 (759)
++.++..+.....+
T Consensus 101 ~~~i~~~~~~~~~~ 114 (496)
T PRK06839 101 TTVLFVEKTFQNMA 114 (496)
T ss_pred ceEEEEcHHHHHHH
Confidence 99998888766544
No 206
>PRK08308 acyl-CoA synthetase; Validated
Probab=28.41 E-value=6.2e+02 Score=27.69 Aligned_cols=96 Identities=8% Similarity=0.152 Sum_probs=66.4
Q ss_pred CCCeEEEEEEcC-CCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--hHHHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPML--MELPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s--~e~iva~LA~~kaGav~vpld 288 (759)
.++..|++...+ ..|. .-.+|++.+...+..+.. ..++.++|++...+|.. ..++..++..+..|+..+..+
T Consensus 99 ~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 175 (414)
T PRK08308 99 LAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT 175 (414)
T ss_pred CCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC
Confidence 456666665432 2222 456899988876655543 45678889888877755 345667888999999776654
Q ss_pred CCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 289 AGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 289 p~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
...++.+...++..++.+++....
T Consensus 176 -~~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 176 -NKNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred -CCCHHHHHHHHHHhCCeEEEcCHH
Confidence 466788888999999998876543
No 207
>PRK07798 acyl-CoA synthetase; Validated
Probab=28.34 E-value=4.7e+02 Score=29.59 Aligned_cols=70 Identities=11% Similarity=-0.051 Sum_probs=53.4
Q ss_pred HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHh
Q 004348 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 497 (759)
Q Consensus 423 ~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~ 497 (759)
..++.++|++....+-+... ...+|+.+..|+..+..+.. ...+.+..++++.++..++........+..
T Consensus 47 ~~g~~~~~~v~v~~~n~~~~--~~~~~a~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 116 (533)
T PRK07798 47 AQGLGPGDHVGIYARNRIEY--VEAMLGAFKARAVPVNVNYR---YVEDELRYLLDDSDAVALVYEREFAPRVAE 116 (533)
T ss_pred HcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCeEEEecCcC---CCHHHHHHHHhhcCCCEEEEchhhHHHHHH
Confidence 35788999988887766543 44577888899988877643 367889999999999999888776655544
No 208
>PRK05857 acyl-CoA synthetase; Validated
Probab=28.30 E-value=3.1e+02 Score=31.49 Aligned_cols=95 Identities=13% Similarity=-0.049 Sum_probs=64.4
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHH--HHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATT--FKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~--~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.|+.+|.+.. .| ...+|.+.+....... .-...++.++|++...++-++.. +..+|+.+..|+..+..+
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecC
Confidence 4666666432 22 1347877743322211 11235788999999988877764 456788889999998886
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHHH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTL 491 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~ 491 (759)
.. .+.+.+..+++..++..++..+..
T Consensus 98 ~~---~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GN---LPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cc---CCHHHHHHHHHhcCCceEEEeccc
Confidence 43 378899999999999988877653
No 209
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.18 E-value=2.8e+02 Score=31.79 Aligned_cols=86 Identities=9% Similarity=-0.035 Sum_probs=60.1
Q ss_pred EEccchHHHH---HHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 406 LHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 406 ~~th~~~l~~---~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
.+|...+... ........+++.++|++....+-+... +..+++.+..|+..+..+.. ..++.+..++++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~ 109 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQF--VIAYYAILRANAVVVPVNPM---NREEELAHYVTDSGA 109 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHH--HHHHHHHHHcCcEEeecCcC---cCHHHHHHHHHhCCC
Confidence 3677763222 222233334899999998888766532 45678888899998887643 377899999999999
Q ss_pred cEEEehHHHHHHHH
Q 004348 483 TIFYTAPTLVRSLM 496 (759)
Q Consensus 483 T~l~~~Ps~l~~l~ 496 (759)
+.+.+.+.....+.
T Consensus 110 ~~ii~~~~~~~~~~ 123 (546)
T PRK08314 110 RVAIVGSELAPKVA 123 (546)
T ss_pred eEEEEccchhhhHH
Confidence 99988876655443
No 210
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=28.13 E-value=8.6e+02 Score=26.99 Aligned_cols=87 Identities=20% Similarity=0.147 Sum_probs=51.5
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHH-hCC--eEEecCC--CCCHHHHHHHHHhcCCeEEEEeCCccc
Q 004348 242 VCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACAR-IGA--VHSVVFA--GFSSDSLAQRIMDCKPKVVITSNAVKR 316 (759)
Q Consensus 242 a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~k-aGa--v~vpldp--~~~~~~l~~il~~~~~~~iit~~~~~~ 316 (759)
.+.+|..|... +++||.|.+---...--++......+ .|+ .++|++. .+..+.+.. +-+-+.++|..+.....
T Consensus 97 ln~va~~l~~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~-~i~~~Tklvais~vSn~ 174 (405)
T COG0520 97 LNLVARGLGRS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEK-LITPKTKLVALSHVSNV 174 (405)
T ss_pred HHHHHHHhhhh-hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHH-hcCCCceEEEEECcccc
Confidence 45555555443 78888887777666555655555554 586 5566542 244566665 33445677776665555
Q ss_pred CCcccchHHHHHHH
Q 004348 317 GPKAIHLKDIVDAA 330 (759)
Q Consensus 317 ~~~~~~~~~~v~~~ 330 (759)
.+...+++++...+
T Consensus 175 tG~~~pv~~I~~la 188 (405)
T COG0520 175 TGTVNPVKEIAELA 188 (405)
T ss_pred ccccchHHHHHHHH
Confidence 55566666655443
No 211
>PRK06164 acyl-CoA synthetase; Validated
Probab=28.13 E-value=5.2e+02 Score=29.50 Aligned_cols=96 Identities=15% Similarity=0.103 Sum_probs=67.4
Q ss_pred CCCeEEEEEEcC-CCC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCh-HHHHHHHHHHHhCCeEEecCC
Q 004348 214 LGDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLM-ELPIAMLACARIGAVHSVVFA 289 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~-e~iva~LA~~kaGav~vpldp 289 (759)
.++.+|++...+ ..| ..-.+|.+.|...+..++..+ ++.+++++...+|-+- -.+..+++.+..|+..+.. +
T Consensus 179 ~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 254 (540)
T PRK06164 179 DPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-P 254 (540)
T ss_pred CCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-C
Confidence 457778876432 222 234688888877666555444 6889999988887642 2234677888888877665 5
Q ss_pred CCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 290 GFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 290 ~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
.+...++...|++.++.+++....
T Consensus 255 ~~~~~~~~~~l~~~~~t~~~~~p~ 278 (540)
T PRK06164 255 VFDAARTARALRRHRVTHTFGNDE 278 (540)
T ss_pred CCCHHHHHHHHHHhCCeeecCCHH
Confidence 678889999999999999886543
No 212
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=28.01 E-value=4.7e+02 Score=28.77 Aligned_cols=72 Identities=17% Similarity=0.152 Sum_probs=44.0
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCe-EEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHH
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAV-HSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav-~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v 327 (759)
+++||+|.+..+.-....-.+....+.+++ ...++ ....+.+...+.. +.++|+.+......+...+++.+.
T Consensus 88 ~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd-~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~ 160 (386)
T PRK08045 88 LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD-QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKIC 160 (386)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHH
Confidence 578998877765444344444444555653 33444 3556778777754 778888876655556666655443
No 213
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=28.01 E-value=3.8e+02 Score=31.56 Aligned_cols=97 Identities=14% Similarity=-0.039 Sum_probs=65.2
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.++.+|++ +-+..+|. .-.+|.+.+.... +...-...++.++|++...++-+... +..+++.+..|+..+.+.
T Consensus 65 ~p~~~Al~-~~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~--v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALV-TVSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA--VFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEE-EEcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecC
Confidence 35666654 43323332 2347777643222 22222346899999999998877644 456788899999988776
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAP 489 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~P 489 (759)
.. ..++.+...|++.++.++.+..
T Consensus 140 ~~---~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GG---FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CC---CCHHHHHHHHHhcCceEEEECC
Confidence 43 4788999999999999887754
No 214
>PLN02574 4-coumarate--CoA ligase-like
Probab=27.93 E-value=3e+02 Score=31.81 Aligned_cols=100 Identities=16% Similarity=0.098 Sum_probs=66.5
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHH---HHHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVH---TATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~---~~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.++.+|++- +.+|. .+|.+.+... .+..+....++.++|++....+-+... ...+|+++..|+..+..
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF--PVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH--HHHHHHHHHhCeEEeCc
Confidence 456666653 22231 3566653222 222222227899999999888766543 45678888999998877
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHH
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLM 496 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~ 496 (759)
+.. ...+++..++++.++..++..+..+..+.
T Consensus 123 ~p~---~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 123 NPS---SSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred Ccc---cCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 543 37788999999999999888887666554
No 215
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=27.50 E-value=3.4e+02 Score=31.17 Aligned_cols=70 Identities=17% Similarity=0.019 Sum_probs=56.0
Q ss_pred HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHHHh
Q 004348 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSLMR 497 (759)
Q Consensus 423 ~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l~~ 497 (759)
..++.+++++....+-+... +..+++.+..|+..+..+.. ...+++..++++.+++.+++.+.....+.+
T Consensus 65 ~~gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~---~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~ 134 (542)
T PRK06155 65 AAGVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTA---LRGPQLEHILRNSGARLLVVEAALLAALEA 134 (542)
T ss_pred HcCCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccc---cCHHHHHHHHHhcCceEEEEChhhHHHHHH
Confidence 35788999998888877654 45678889999999888653 377899999999999999988877665543
No 216
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=26.81 E-value=2.5e+02 Score=33.25 Aligned_cols=80 Identities=9% Similarity=-0.057 Sum_probs=58.9
Q ss_pred EEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 405 VLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 405 V~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
..+|.+.+.... +...-...++.++|++...++..... +..+++++..|+..+.+... +.++.+...|++.++
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~---~~~~~l~~~l~~~~~ 165 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP--LIAMLSCARIGATHCVLFDG---YSVKSLIDRIETITP 165 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEEeeCCC---CCHHHHHHHHHhcCC
Confidence 567877743222 12222346899999999999887654 45678889999998887643 488999999999999
Q ss_pred cEEEehH
Q 004348 483 TIFYTAP 489 (759)
Q Consensus 483 T~l~~~P 489 (759)
+++++..
T Consensus 166 ~~li~~~ 172 (647)
T PTZ00237 166 KLIITTN 172 (647)
T ss_pred CEEEEcc
Confidence 9988764
No 217
>PRK07529 AMP-binding domain protein; Validated
Probab=26.68 E-value=4.5e+02 Score=30.95 Aligned_cols=97 Identities=10% Similarity=0.106 Sum_probs=62.1
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.|+.+|.+.+..+.. ..++..+|.+.+.... ....-...++.++|++...++-+... ...+|+.+..|. ++..+
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi-~~pi~ 113 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET--HFALWGGEAAGI-ANPIN 113 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCE-EEeCC
Confidence 467777766533221 1234567777643222 11222346889999999988877654 456777777774 33333
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEeh
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTA 488 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~ 488 (759)
+. ..++.+..++++.++.++.+.
T Consensus 114 --~~-~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 114 --PL-LEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred --Cc-CCHHHHHHHHHhcCCcEEEEe
Confidence 33 388999999999999988875
No 218
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=26.21 E-value=2.9e+02 Score=31.17 Aligned_cols=50 Identities=16% Similarity=0.040 Sum_probs=34.5
Q ss_pred HHcCCCCCCEEEEEcCCChHHHHHHHH-HHHhCCeEEec--------------CCCCCHHHHHHHHHhcC
Q 004348 250 KDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVV--------------FAGFSSDSLAQRIMDCK 304 (759)
Q Consensus 250 ~~~Gv~~gd~Vai~~~~s~e~iva~LA-~~kaGav~vpl--------------dp~~~~~~l~~il~~~~ 304 (759)
..+++++||.| .+..++.+.-| +...|++++=+ .-++..+.++..|+...
T Consensus 110 ~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 110 SRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 34689999965 44445555555 78888877733 33578899999988654
No 219
>PRK07503 methionine gamma-lyase; Provisional
Probab=26.13 E-value=4.4e+02 Score=29.19 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=43.6
Q ss_pred CCCCCEEEEEcCCChHHHH-HHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHH
Q 004348 254 VKKGDAVIIYLPMLMELPI-AMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iv-a~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v 327 (759)
+++||.|.+-.+--..... ...++.+.|+.+..++.. ..+.++..+.. +.++|+.+......+...+++.+.
T Consensus 101 l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~ 173 (403)
T PRK07503 101 LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT-DPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVA 173 (403)
T ss_pred cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC-CHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHH
Confidence 7899998775442211111 223455688887777764 46677777754 678888765544445555655443
No 220
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.87 E-value=2.9e+02 Score=22.79 Aligned_cols=67 Identities=12% Similarity=0.124 Sum_probs=52.6
Q ss_pred eeeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeE
Q 004348 231 ATLTYSQLLQQVCQLAN---YLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKV 307 (759)
Q Consensus 231 ~~lTY~eL~~~a~~lA~---~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~ 307 (759)
..+||.||.+.-..+++ +|.+..+...|.|+|+--++... .-.+.|+...+.++++.-+++.++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 46899999998877664 45666788899999998665432 34567888899999999999999876
Q ss_pred E
Q 004348 308 V 308 (759)
Q Consensus 308 i 308 (759)
=
T Consensus 77 n 77 (88)
T COG4009 77 N 77 (88)
T ss_pred c
Confidence 4
No 221
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=25.81 E-value=3.9e+02 Score=30.90 Aligned_cols=80 Identities=10% Similarity=-0.092 Sum_probs=57.1
Q ss_pred EEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCc
Q 004348 406 LHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (759)
Q Consensus 406 ~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT 483 (759)
.+|.+.+.... +...-...++.++|++...++-+... +..+++.+..|+..+..+.. ..++++..++++.+++
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~--~~~~la~~~~Gav~vpl~~~---~~~~~l~~~l~~~~~~ 106 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLY--LEWLLAVACAGGIVAPLNYR---WSFEEAKSAMLLVRPV 106 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHhhccEEEEeCCcc---cCHHHHHHHHHhcCce
Confidence 36666633222 11122236899999999988877654 45678888999998887643 3789999999999999
Q ss_pred EEEehHH
Q 004348 484 IFYTAPT 490 (759)
Q Consensus 484 ~l~~~Ps 490 (759)
++.+.+.
T Consensus 107 ~i~~~~~ 113 (563)
T PLN02860 107 MLVTDET 113 (563)
T ss_pred EEEEecc
Confidence 8887654
No 222
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=25.73 E-value=3.1e+02 Score=31.56 Aligned_cols=96 Identities=13% Similarity=0.059 Sum_probs=65.2
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH----HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEE
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK----YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVV 460 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~----~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl 460 (759)
.++.+|++.. | -.+|...+ ......+. ...+++++|++...++-+... ...+++.+..|++.+.
T Consensus 38 ~~~~~a~~~~-----~----~~~Ty~el-~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~ 105 (560)
T PRK08751 38 FADRPAYHSF-----G----KTITYREA-DQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY--PIATFGVLRAGLTVVN 105 (560)
T ss_pred CCCCceEEEC-----C----ceeeHHHH-HHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEec
Confidence 4667776532 1 23677763 22222222 236899999998888777653 4567888999999887
Q ss_pred ecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 461 FEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 461 ~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
.+.. ..+..+...+.+.+++.+.+.......+
T Consensus 106 l~p~---~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 106 VNPL---YTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred cCcc---CCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 7643 3678899999999999888876554433
No 223
>PRK13391 acyl-CoA synthetase; Provisional
Probab=25.70 E-value=5e+02 Score=29.40 Aligned_cols=98 Identities=11% Similarity=0.075 Sum_probs=65.5
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.|+.+|.+...+| + .+|...+.... ....-...++.+++++....+-+... ...+++.+..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-----~--~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~--~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-----E--VVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY--LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-----C--EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhccEEeccc
Confidence 4566776654432 2 36666632221 11112235788999998888777654 345778888999988876
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHHHHHH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRS 494 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~ 494 (759)
.. .+.+.+..++++.++..+.+.+.....
T Consensus 81 ~~---~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 81 SH---LTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred cc---cCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 43 377899999999999998887765543
No 224
>PLN02246 4-coumarate--CoA ligase
Probab=25.34 E-value=3.1e+02 Score=31.44 Aligned_cols=99 Identities=12% Similarity=-0.010 Sum_probs=65.4
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHH--HHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEec
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTA--TTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFE 462 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~--~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~ 462 (759)
.++.+|++.. .+ +-.+|+..+..... ...-...++.++|++....+-+... ...+++.+..|++.+..+
T Consensus 36 ~~~~~a~~~~---~~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDG---AT----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF--VLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEec---CC----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHHcCEEEecCC
Confidence 3666775532 11 23577777433221 1122246899999998888776543 456788888999988876
Q ss_pred CCCCCCChhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 463 GAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 463 ~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
.. ...+.+..+++..++..+.........+
T Consensus 107 ~~---~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 107 PF---YTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CC---CCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 43 3778999999999999888766554443
No 225
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=25.00 E-value=3.3e+02 Score=35.62 Aligned_cols=98 Identities=15% Similarity=0.011 Sum_probs=63.9
Q ss_pred CCCCcEEEEeccCCCCCCcEEEEccchHHHHHHHHHH---HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEe
Q 004348 385 DAEDPLFLLYTSGSTGKPKGVLHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVF 461 (759)
Q Consensus 385 ~~~d~a~IiyTSGSTG~PKgV~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~ 461 (759)
.|+.+|++...+...+......+|.+.+. ....... ...++.+++++...++-+... +..+++.+..|+..+.+
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~-~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQIN-EASNILAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSVI 325 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHH-HHHHHHHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEecc
Confidence 46777766432211011123457887743 2222222 235789999998888877654 45688999999998887
Q ss_pred cCCCCCCChhHHHHHHHHcCCcEEEeh
Q 004348 462 EGAPTYPDSGRSWDIVDKYKVTIFYTA 488 (759)
Q Consensus 462 ~~~~~~~d~~~l~~~i~~~~vT~l~~~ 488 (759)
+.. ..++++..+++..++.++.+.
T Consensus 326 dp~---~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 326 DPA---YPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCC---CcHHHHHHHHHhcCCCEEEEe
Confidence 643 367888899999998877654
No 226
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.94 E-value=6.1e+02 Score=29.15 Aligned_cols=98 Identities=21% Similarity=0.247 Sum_probs=69.5
Q ss_pred CCCeEEEEEEcC-CCC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--ChHHHHHHHHHHHhCCeEEecC
Q 004348 214 LGDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPM--LMELPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~--s~e~iva~LA~~kaGav~vpld 288 (759)
.|+.+|++...+ ..| .+-.+|++.+...+..+...+... +++.|++...+|- ..-+...+++.+..|+..+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 467777765422 112 345789999988876666555422 7888987778774 4566777888899999888877
Q ss_pred C-CCCHHHHHHHHHhcCCeEEEEeC
Q 004348 289 A-GFSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 289 p-~~~~~~l~~il~~~~~~~iit~~ 312 (759)
+ .+.++.+...+.+.++..+....
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vP 272 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVP 272 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecch
Confidence 5 68998999999888866655443
No 227
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.92 E-value=4.4e+02 Score=30.42 Aligned_cols=82 Identities=15% Similarity=0.073 Sum_probs=57.7
Q ss_pred EEccchHHHHHHHHHHH----HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 406 LHTTGGYMVHTATTFKY----AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 406 ~~th~~~l~~~~~~~~~----~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
.+|.+.+. .....+.. ..++.++|++...++-+... ...+|+.+..|+..+..+.. ...+.+...+++-+
T Consensus 49 ~~Ty~el~-~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l~~~---~~~~~l~~~l~~~~ 122 (562)
T PRK05677 49 TLTYGELY-KLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNTNPL---YTAREMEHQFNDSG 122 (562)
T ss_pred eeeHHHHH-HHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeecCCC---CCHHHHHHHHhccC
Confidence 46777743 22222222 24789999999988877654 45678888999988877643 37788999999999
Q ss_pred CcEEEehHHHHH
Q 004348 482 VTIFYTAPTLVR 493 (759)
Q Consensus 482 vT~l~~~Ps~l~ 493 (759)
+..+........
T Consensus 123 ~~~ii~~~~~~~ 134 (562)
T PRK05677 123 AKALVCLANMAH 134 (562)
T ss_pred ceEEEEecchhh
Confidence 998887654433
No 228
>PRK07638 acyl-CoA synthetase; Validated
Probab=24.90 E-value=5.6e+02 Score=28.72 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=58.6
Q ss_pred ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChH-HHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEE
Q 004348 230 DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVV 308 (759)
Q Consensus 230 ~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e-~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~i 308 (759)
.-.+|.+.+...+...+ ...+++++|++....+-... .+..++..+..|+..+.. +.+.++++...+++.++.++
T Consensus 160 gv~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 235 (487)
T PRK07638 160 AFLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVM 235 (487)
T ss_pred EEEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEE
Confidence 34678877766554433 45578899999887765433 345667778889887754 56788999999999999999
Q ss_pred EEeCC
Q 004348 309 ITSNA 313 (759)
Q Consensus 309 it~~~ 313 (759)
.....
T Consensus 236 ~~~P~ 240 (487)
T PRK07638 236 YTVPT 240 (487)
T ss_pred EeCcH
Confidence 98664
No 229
>PRK03321 putative aminotransferase; Provisional
Probab=24.87 E-value=5.8e+02 Score=27.27 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=38.7
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEe--cCCC--CCHHHHHHHHHhcCCeEEEEeCCcccCCcccchH
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSV--VFAG--FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLK 324 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vp--ldp~--~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~ 324 (759)
+++||.|.+-.|.-.. ...++...|+..++ ++++ ...+.+...++. ++++++........+...+..
T Consensus 95 ~~~gd~Vli~~p~y~~---~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~ 165 (352)
T PRK03321 95 AGPGDEVIFAWRSFEA---YPILVQVAGATPVQVPLTPDHTHDLDAMAAAITD-RTRLIFVCNPNNPTGTVVTPA 165 (352)
T ss_pred cCCCCEEEeCCCCHHH---HHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhcc-CCCEEEEeCCCCCcCCCcCHH
Confidence 5789998875544222 22345567875444 4422 456777776654 677777665544445555544
No 230
>PRK05850 acyl-CoA synthetase; Validated
Probab=24.85 E-value=6.4e+02 Score=29.07 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=65.8
Q ss_pred CCCCcEEEEec-cCC-CCCCcEEEEccchHHHHH---HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEE
Q 004348 385 DAEDPLFLLYT-SGS-TGKPKGVLHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVV 459 (759)
Q Consensus 385 ~~~d~a~IiyT-SGS-TG~PKgV~~th~~~l~~~---~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlv 459 (759)
.|+.+|++... ++. .|. ...+|...+.... +..+. ..+ .++|++....+-+... +..+++.+..|+..+
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~-~~g-~~gd~V~l~~~n~~~~--~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELR-RHG-STGDRAVILAPQGLEY--IVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHH-HhC-CCCCEEEEEcCCcccH--HHHHHHHHHcCceEE
Confidence 35666665431 111 122 2457777643222 22222 234 5789998888877643 456788889999988
Q ss_pred EecCCCCCCChhHHHHHHHHcCCcEEEehHHHHHHH
Q 004348 460 VFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLVRSL 495 (759)
Q Consensus 460 l~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l~~l 495 (759)
..+......+.+++..+|++.++.++.+.+.....+
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 876421112567899999999999999888766554
No 231
>PRK07514 malonyl-CoA synthase; Validated
Probab=24.58 E-value=3.5e+02 Score=30.51 Aligned_cols=86 Identities=13% Similarity=0.043 Sum_probs=59.8
Q ss_pred EEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 405 VLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 405 V~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
..+|...+.... ....-...++.++|++....+-+... ...+++.+..|+..+..+.. .....+..++++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~--~v~~la~~~~G~~~v~l~~~---~~~~~~~~~l~~~~~ 101 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA--LALYLATLRAGAVFLPLNTA---YTLAELDYFIGDAEP 101 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEEECCCC---CCHHHHHHHHHhCCC
Confidence 356766532221 11122246889999998888776543 45678888999998877643 377889999999999
Q ss_pred cEEEehHHHHHHH
Q 004348 483 TIFYTAPTLVRSL 495 (759)
Q Consensus 483 T~l~~~Ps~l~~l 495 (759)
+.+...+.....+
T Consensus 102 ~~ii~~~~~~~~~ 114 (504)
T PRK07514 102 ALVVCDPANFAWL 114 (504)
T ss_pred cEEEEccchhHHH
Confidence 9988877665543
No 232
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=24.53 E-value=1.4e+02 Score=24.78 Aligned_cols=42 Identities=21% Similarity=0.377 Sum_probs=35.5
Q ss_pred HHHHH-cCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecC
Q 004348 247 NYLKD-IGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF 288 (759)
Q Consensus 247 ~~L~~-~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpld 288 (759)
.+|.+ .||+.|+.++.+...-.|.+.++=|.+|+.-+-+-..
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~~~~ 46 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVELATF 46 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceeeEee
Confidence 46654 4999999999999999999999999999997655443
No 233
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=24.35 E-value=2.4e+02 Score=31.71 Aligned_cols=58 Identities=22% Similarity=0.284 Sum_probs=38.6
Q ss_pred HcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCC-----CCHHHHHHHHHhcCCeEEEEeC
Q 004348 251 DIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAG-----FSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 251 ~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~-----~~~~~l~~il~~~~~~~iit~~ 312 (759)
+.++++||.|.+-.+. +.....++...|+..++++.+ ...+.++..+.. +.++|+...
T Consensus 105 ~~~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~ 167 (438)
T PRK15407 105 DRALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAH 167 (438)
T ss_pred ccCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeC
Confidence 3489999998766443 445556677789977666543 356777777643 567777654
No 234
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=24.34 E-value=6.1e+02 Score=27.05 Aligned_cols=90 Identities=14% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCChHH-HHHHHHHHHhCCeEEecCCC--CCHHHHHHHHHhcCCeEEEEeCCcccCC
Q 004348 242 VCQLANYLKDIGVKKGDAVIIYLPMLMEL-PIAMLACARIGAVHSVVFAG--FSSDSLAQRIMDCKPKVVITSNAVKRGP 318 (759)
Q Consensus 242 a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~-iva~LA~~kaGav~vpldp~--~~~~~l~~il~~~~~~~iit~~~~~~~~ 318 (759)
...+...+... +++||.|.+..+..... ...++....+-.+++|+++. ...+.++..+++.++++|+........+
T Consensus 60 t~al~~~~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G 138 (356)
T cd06451 60 TGAMEAALSNL-LEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTG 138 (356)
T ss_pred HHHHHHHHHHh-CCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcc
Q ss_pred cccchHHHHHHHHH
Q 004348 319 KAIHLKDIVDAALD 332 (759)
Q Consensus 319 ~~~~~~~~v~~~~~ 332 (759)
...++..+..-+.+
T Consensus 139 ~~~~~~~i~~~a~~ 152 (356)
T cd06451 139 VLNPLEGIGALAKK 152 (356)
T ss_pred cccCHHHHHHHHHh
No 235
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=24.33 E-value=9.8e+02 Score=26.36 Aligned_cols=74 Identities=19% Similarity=0.122 Sum_probs=45.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecC--C-----CCCHHHHHHHHHhcCCeEEEEeCCccc
Q 004348 244 QLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--A-----GFSSDSLAQRIMDCKPKVVITSNAVKR 316 (759)
Q Consensus 244 ~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpld--p-----~~~~~~l~~il~~~~~~~iit~~~~~~ 316 (759)
.+...+... +.+||.|.|..|.=+.+.. .+..+|+..++++ + ....+.++..+.. +.|+|+.......
T Consensus 101 al~~~~~a~-~~pGDeVlip~P~Y~~y~~---~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NP 175 (393)
T COG0436 101 ALFLAFLAL-LNPGDEVLIPDPGYPSYEA---AVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNP 175 (393)
T ss_pred HHHHHHHHh-cCCCCEEEEeCCCCcCHHH---HHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCC
Confidence 334444444 6789988877766544433 3455777655544 2 2246778888887 8888888766554
Q ss_pred CCcccc
Q 004348 317 GPKAIH 322 (759)
Q Consensus 317 ~~~~~~ 322 (759)
-+....
T Consensus 176 TGav~~ 181 (393)
T COG0436 176 TGAVYS 181 (393)
T ss_pred cCcCCC
Confidence 444443
No 236
>PRK07867 acyl-CoA synthetase; Validated
Probab=24.31 E-value=4.4e+02 Score=30.15 Aligned_cols=85 Identities=11% Similarity=-0.024 Sum_probs=58.6
Q ss_pred EEccchHHHHH---HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 406 LHTTGGYMVHT---ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 406 ~~th~~~l~~~---~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
.+|...+.... +..+....+..+++++...++-+... +..+++.+..|+.++.++.. ..++++..++++.++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~ 102 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEF--SLLLGAAALSGIVPVGLNPT---RRGAALARDIAHADC 102 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCCEEEEecCC---CChHHHHHHHHhCCC
Confidence 46766643222 22233323567788887777765543 45678889999999887643 377899999999999
Q ss_pred cEEEehHHHHHHH
Q 004348 483 TIFYTAPTLVRSL 495 (759)
Q Consensus 483 T~l~~~Ps~l~~l 495 (759)
.++.+.......+
T Consensus 103 ~~li~~~~~~~~~ 115 (529)
T PRK07867 103 QLVLTESAHAELL 115 (529)
T ss_pred eEEEECHhHHHHH
Confidence 9999887665543
No 237
>PRK10595 SOS cell division inhibitor; Provisional
Probab=24.29 E-value=2.7e+02 Score=26.67 Aligned_cols=65 Identities=14% Similarity=0.101 Sum_probs=45.0
Q ss_pred HHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecC--C-CCCHH---HHHHHHHhcCCeEEEE
Q 004348 246 ANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--A-GFSSD---SLAQRIMDCKPKVVIT 310 (759)
Q Consensus 246 A~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpld--p-~~~~~---~l~~il~~~~~~~iit 310 (759)
+.+|.+.|+..+..+.|...+..+.+-++-=+++.|...+.|- | ....+ ||...-+..++-.++.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 5688999999888777777888899999999999997443332 3 45443 4444444555545544
No 238
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=23.92 E-value=5.4e+02 Score=26.88 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=42.7
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCC----------CCCHHHHHHHHHh-cCCeEEEEeCCcccCCcccc
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----------GFSSDSLAQRIMD-CKPKVVITSNAVKRGPKAIH 322 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp----------~~~~~~l~~il~~-~~~~~iit~~~~~~~~~~~~ 322 (759)
+++||+|.+.-+.. ...+-++...|+..+.+++ ..+.+.++..++. .++++++..... ..+...+
T Consensus 96 ~~~gd~Vlv~~~~h---~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~-~~G~~~d 171 (294)
T cd00615 96 CGPGDKILIDRNCH---KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNPT-YYGICYN 171 (294)
T ss_pred CCCCCEEEEeCCch---HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECCC-CCCEecC
Confidence 67899887764432 2233455667886665544 3568889888875 567776665443 3455556
Q ss_pred hHHHH
Q 004348 323 LKDIV 327 (759)
Q Consensus 323 ~~~~v 327 (759)
++++.
T Consensus 172 l~~I~ 176 (294)
T cd00615 172 LRKIV 176 (294)
T ss_pred HHHHH
Confidence 55443
No 239
>PRK06234 methionine gamma-lyase; Provisional
Probab=23.75 E-value=6.4e+02 Score=27.86 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=46.0
Q ss_pred CCCCCEEEEEcCCChHHHHH-HHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCCcccCCcccchHHHH
Q 004348 254 VKKGDAVIIYLPMLMELPIA-MLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNAVKRGPKAIHLKDIV 327 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva-~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~~~~~v 327 (759)
+++||.|.+..+.-...... ..++-+.|+..+.++.. ..+.++..+.. +.++|+.+......+...+++.+.
T Consensus 100 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~ 172 (400)
T PRK06234 100 LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-NLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAIS 172 (400)
T ss_pred hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-CHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHH
Confidence 57899887665433333322 23556789888887764 56677777753 678888776655556666655544
No 240
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=23.64 E-value=2.9e+02 Score=29.16 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=41.8
Q ss_pred HHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEcCCCCCc--HHHHHHHHHHHHhhcCCCccccEEEEeCC
Q 004348 641 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYS--EELRKSLVLAVRKQIGAFAAPDKIHWAPG 713 (759)
Q Consensus 641 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~~~~~~~--~~l~~~l~~~l~~~Lp~~~vP~~iv~v~~ 713 (759)
..+|++.+.++|+|.++-=+-.........+-+.++..++.... .++.+++++.+++++|.. ..++.++.
T Consensus 215 ~~~I~~~i~~~~~v~~v~~l~~~~~G~~~~v~v~i~v~~~~~~~e~h~i~~~ie~~l~~~~~~~---~v~ihveP 286 (299)
T PRK09509 215 RQEIIDIVTSWPGVSGAHDLRTRQSGPTRFIQLHLEMEDNLPLVQAHMIADQVEQALLRRFPGS---DVIIHQDP 286 (299)
T ss_pred HHHHHHHHHhCCCCcCceeeeeEeeCCeEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHhCCCC---EEEEEeCC
Confidence 46788999999988765533222222233455667776554322 345677888888887743 24455543
No 241
>PRK08316 acyl-CoA synthetase; Validated
Probab=23.63 E-value=3.7e+02 Score=30.35 Aligned_cols=87 Identities=13% Similarity=-0.035 Sum_probs=60.5
Q ss_pred EEEccchHHHHHHH--HHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 405 VLHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 405 V~~th~~~l~~~~~--~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
..+|...+...... ..-...++.++|++....+-+... ...+++.+..|+..+..+.. ...+.+..++++.++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~--~~~~~a~~~~G~~~v~l~~~---~~~~~i~~~l~~~~~ 109 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY--ALLWLACARAGAVHVPVNFM---LTGEELAYILDHSGA 109 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecccc---cCHHHHHHHHHhCCC
Confidence 34666663322211 111235789999999888877754 45678888999988887643 377889999999999
Q ss_pred cEEEehHHHHHHHH
Q 004348 483 TIFYTAPTLVRSLM 496 (759)
Q Consensus 483 T~l~~~Ps~l~~l~ 496 (759)
.+++........+.
T Consensus 110 ~~ii~~~~~~~~~~ 123 (523)
T PRK08316 110 RAFLVDPALAPTAE 123 (523)
T ss_pred CEEEEccchHHHHH
Confidence 99988877665543
No 242
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=23.43 E-value=87 Score=32.11 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=59.8
Q ss_pred HHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCC--HHHHHHHHHh-cCCeEEEEeCCcccCCcccch
Q 004348 247 NYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFS--SDSLAQRIMD-CKPKVVITSNAVKRGPKAIHL 323 (759)
Q Consensus 247 ~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~--~~~l~~il~~-~~~~~iit~~~~~~~~~~~~~ 323 (759)
-.+.+.-.-||.-=.+.+|.+..|.+.--++.-++.+-+|++|+++ .+++..+++. +.+|+++..+.-...++.+..
T Consensus 100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~ 179 (375)
T KOG0633|consen 100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKE 179 (375)
T ss_pred HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccH
Confidence 3444445678866678899999999999999999999999999876 6788887765 599999988766555555543
No 243
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.42 E-value=4e+02 Score=30.77 Aligned_cols=84 Identities=11% Similarity=-0.047 Sum_probs=60.0
Q ss_pred EEccchHHHHHHHHHH---HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 406 LHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 406 ~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
.+|.+.+. ....... ...++..+|++....+-+... ...+++.+..|+..+..+.. ..++.+...+.+.++
T Consensus 57 ~~Ty~ql~-~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~ 130 (573)
T PRK05605 57 TTTYAELG-KQVRRAAAGLRALGVRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHNPL---YTAHELEHPFEDHGA 130 (573)
T ss_pred cccHHHHH-HHHHHHHHHHHHhCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCcC---CCHHHHHHHHhccCC
Confidence 36777633 2222222 245788999998888776653 45678888999998887643 378999999999999
Q ss_pred cEEEehHHHHHHH
Q 004348 483 TIFYTAPTLVRSL 495 (759)
Q Consensus 483 T~l~~~Ps~l~~l 495 (759)
..+++....+..+
T Consensus 131 ~~ii~~~~~~~~~ 143 (573)
T PRK05605 131 RVAIVWDKVAPTV 143 (573)
T ss_pred cEEEechhhHHHH
Confidence 9998877765544
No 244
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=23.19 E-value=2.9e+02 Score=21.68 Aligned_cols=33 Identities=21% Similarity=0.132 Sum_probs=24.2
Q ss_pred HHHHHHHHhcCCccceEEEEeEecCCCCeEEEEEEEEc
Q 004348 641 TAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLV 678 (759)
Q Consensus 641 ~~eIE~~L~~~p~V~ea~Vv~~~~~~~~~~lva~Vv~~ 678 (759)
..++.+.|.++|.|.+|..+. +...+.+.+..+
T Consensus 12 ~~~~~~~l~~~p~V~~~~~vt-----G~~d~~~~v~~~ 44 (74)
T PF01037_consen 12 YDEFAEALAEIPEVVECYSVT-----GEYDLILKVRAR 44 (74)
T ss_dssp HHHHHHHHHTSTTEEEEEEES-----SSSSEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEEEEEe-----CCCCEEEEEEEC
Confidence 678899999999999998873 233355666553
No 245
>PRK09265 aminotransferase AlaT; Validated
Probab=23.07 E-value=1e+03 Score=26.07 Aligned_cols=65 Identities=15% Similarity=0.116 Sum_probs=36.0
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEe--cCCC----CCHHHHHHHHHhcCCeEEEEeCCcccCCcccc
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSV--VFAG----FSSDSLAQRIMDCKPKVVITSNAVKRGPKAIH 322 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vp--ldp~----~~~~~l~~il~~~~~~~iit~~~~~~~~~~~~ 322 (759)
+++||.|.+-.|.-.. ...++...|+..++ ++.. ...+.+...++ .++++|+........+...+
T Consensus 116 ~~~gd~Vlv~~p~y~~---~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~~ 186 (404)
T PRK09265 116 LNNGDEVLVPAPDYPL---WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNNPTGAVYS 186 (404)
T ss_pred CCCCCEEEEeCCCCcC---hHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCcCCC
Confidence 5789998886555443 22233456765544 4432 34566766653 45776665554444444444
No 246
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=23.05 E-value=3.7e+02 Score=29.31 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecC--C---CCCHHHHHHHHHh---cCCeEEEEeC
Q 004348 243 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVF--A---GFSSDSLAQRIMD---CKPKVVITSN 312 (759)
Q Consensus 243 ~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpld--p---~~~~~~l~~il~~---~~~~~iit~~ 312 (759)
..+...+..+++++||.|.+-.+. +....-++...|+.++.++ + ....+.++..++. -+.++|+...
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~ 129 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD 129 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC
Confidence 334445566788999987766543 4444566778898655544 3 2467888888864 3567776543
No 247
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=22.54 E-value=2.7e+02 Score=30.53 Aligned_cols=63 Identities=19% Similarity=0.247 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCC--C---CCHHHHHHHHHhcCCeEEEEe
Q 004348 245 LANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA--G---FSSDSLAQRIMDCKPKVVITS 311 (759)
Q Consensus 245 lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp--~---~~~~~l~~il~~~~~~~iit~ 311 (759)
+...|..+++++||.|.+-.+ .+.....++...|+.++.++. + ...+.++..+.. +.++|+..
T Consensus 61 l~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~~~ 128 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAIIPV 128 (379)
T ss_pred HHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEEEe
Confidence 344556678899998776543 344445566778987666543 2 356778877754 56777633
No 248
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=22.49 E-value=6.8e+02 Score=27.36 Aligned_cols=70 Identities=19% Similarity=0.208 Sum_probs=42.4
Q ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCC----C--CCHHHHHHHHHhc------CCeEEEEeCCcccCCccc
Q 004348 254 VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFA----G--FSSDSLAQRIMDC------KPKVVITSNAVKRGPKAI 321 (759)
Q Consensus 254 v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp----~--~~~~~l~~il~~~------~~~~iit~~~~~~~~~~~ 321 (759)
+++||.|.+.-. .+.....++...|+..+.++. + ...+.+...++.. ++++|+.+......+...
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~ 175 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA 175 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc
Confidence 478998766432 333334466778886666654 2 5678888888753 678888765443334444
Q ss_pred chHHH
Q 004348 322 HLKDI 326 (759)
Q Consensus 322 ~~~~~ 326 (759)
+++++
T Consensus 176 ~l~~I 180 (387)
T PRK09331 176 DAKKV 180 (387)
T ss_pred cHHHH
Confidence 44443
No 249
>PLN02565 cysteine synthase
Probab=22.47 E-value=6.1e+02 Score=27.16 Aligned_cols=72 Identities=15% Similarity=0.060 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCC-CCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 242 VCQLANYLKDIGV-KKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 242 a~~lA~~L~~~Gv-~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
+..+-..+.+.|. .+|....+....+=.-+..-+++...|.-++.+=|...+.....+++..+++++++++.
T Consensus 50 A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 50 GYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3333344555664 78855445555555555555677779985555445445556677889999999998753
No 250
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=21.96 E-value=4e+02 Score=30.74 Aligned_cols=81 Identities=11% Similarity=0.023 Sum_probs=56.2
Q ss_pred EEEccchHHHHHHHHHH----HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHc
Q 004348 405 VLHTTGGYMVHTATTFK----YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKY 480 (759)
Q Consensus 405 V~~th~~~l~~~~~~~~----~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~ 480 (759)
..+|...+ ......+. ...++.++|++...++-+... ...+++.+..|+..+..+.. ...+.+..++++-
T Consensus 48 ~~~Ty~~l-~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~--~~~~la~~~~G~v~v~~~~~---~~~~~l~~~l~~~ 121 (562)
T PRK12492 48 VTLSYAEL-ERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY--PIAVFGALRAGLIVVNTNPL---YTAREMRHQFKDS 121 (562)
T ss_pred ceeeHHHH-HHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeccCcc---CCHHHHHHHHhcc
Confidence 35677763 22222222 223789999998888776653 45678888899888876542 3778899999999
Q ss_pred CCcEEEehHHH
Q 004348 481 KVTIFYTAPTL 491 (759)
Q Consensus 481 ~vT~l~~~Ps~ 491 (759)
++..+...+.+
T Consensus 122 ~~~~~i~~~~~ 132 (562)
T PRK12492 122 GARALVYLNMF 132 (562)
T ss_pred CceEEEecccc
Confidence 99988776543
No 251
>PRK06188 acyl-CoA synthetase; Validated
Probab=21.82 E-value=7.6e+02 Score=27.93 Aligned_cols=95 Identities=11% Similarity=0.018 Sum_probs=66.8
Q ss_pred CCeEEEEEEcC-CCC--cceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCC
Q 004348 215 GDKVAIYWEAN-DPG--VDATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGF 291 (759)
Q Consensus 215 pd~~Al~~~~~-~~~--~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~ 291 (759)
++.+|.+...+ ..| ..-.+|++.+...+.. .....++..+|++...+|-+-.+...+++.+..|+..+..+ ..
T Consensus 167 ~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~ 242 (524)
T PRK06188 167 PPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KF 242 (524)
T ss_pred CCCeEEEEeCCCCCCCCceeeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CC
Confidence 34466655432 112 1345788887765543 34556788999999988877666666778888898777664 56
Q ss_pred CHHHHHHHHHhcCCeEEEEeCC
Q 004348 292 SSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 292 ~~~~l~~il~~~~~~~iit~~~ 313 (759)
.++++...+++.++.++.....
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~P~ 264 (524)
T PRK06188 243 DPAEVLRAIEEQRITATFLVPT 264 (524)
T ss_pred CHHHHHHHHHHhCCEEEEehHH
Confidence 7889999999999999987543
No 252
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=21.72 E-value=8.1e+02 Score=27.25 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=64.5
Q ss_pred CCCeEEEEEEcC-CCCc--ceeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChH-HHHHHHHHHHhCCeEEecCC
Q 004348 214 LGDKVAIYWEAN-DPGV--DATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLME-LPIAMLACARIGAVHSVVFA 289 (759)
Q Consensus 214 ~pd~~Al~~~~~-~~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e-~iva~LA~~kaGav~vpldp 289 (759)
.++.+|.+...+ ..|. .-.+|++.+...+... ....++.++|++...+|-.-. -+..+++.+..|+..+..+
T Consensus 139 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 214 (483)
T PRK03640 139 DLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE- 214 (483)
T ss_pred CCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-
Confidence 445666654322 2222 3468888876654332 234689999999998875322 2334677778898877654
Q ss_pred CCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 290 GFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 290 ~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
.....++...+++.++.++.....
T Consensus 215 ~~~~~~~~~~i~~~~~t~l~~~P~ 238 (483)
T PRK03640 215 KFDAEKINKLLQTGGVTIISVVST 238 (483)
T ss_pred CCCHHHHHHHHHHhCCcEEEeHHH
Confidence 578899999999999999987654
No 253
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=21.55 E-value=6.6e+02 Score=26.35 Aligned_cols=65 Identities=14% Similarity=0.070 Sum_probs=41.8
Q ss_pred HHHHHcC-CCCCCEEEEEcCCChHHHHHHHHHHHhCC-eEEecCCCCCHHHHHHHHHhcCCeEEEEeCC
Q 004348 247 NYLKDIG-VKKGDAVIIYLPMLMELPIAMLACARIGA-VHSVVFAGFSSDSLAQRIMDCKPKVVITSNA 313 (759)
Q Consensus 247 ~~L~~~G-v~~gd~Vai~~~~s~e~iva~LA~~kaGa-v~vpldp~~~~~~l~~il~~~~~~~iit~~~ 313 (759)
..+.+.| +.+|++|. ....+=.-...-+++.+.|. +.+.++...++.+ ..+++..+++++++...
T Consensus 46 ~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k-~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 46 WDAEKRGLLKPGKTIV-EPTSGNTGIALAMVAAARGYKLILTMPETMSIER-RKLLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHcCCCCCCCEEE-EeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHH-HHHHHHcCCEEEEECCC
Confidence 3445566 47888774 44444444455556667898 4444455555554 67789999999998754
No 254
>PLN02479 acetate-CoA ligase
Probab=21.36 E-value=5.1e+02 Score=29.90 Aligned_cols=65 Identities=11% Similarity=-0.000 Sum_probs=51.9
Q ss_pred HhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCcEEEehHHHH
Q 004348 423 AFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVTIFYTAPTLV 492 (759)
Q Consensus 423 ~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT~l~~~Ps~l 492 (759)
..++.++|++....+-+... +..+++.+..|+..+..+.. ...+.+..++++.++..+.+.+..+
T Consensus 64 ~~g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~---~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 64 KRSIGPGSTVAVIAPNIPAM--YEAHFGVPMAGAVVNCVNIR---LNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred HcCCCCCCEEEEECCCcHHH--HHHHHHHHhCCcEEEEeccc---cCHHHHHHHHhhcCceEEEEchhhh
Confidence 35899999999888876654 45678888999988887643 3778999999999999998877654
No 255
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=21.35 E-value=5.1e+02 Score=26.96 Aligned_cols=76 Identities=14% Similarity=0.070 Sum_probs=50.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCC----CHHHHHHHHHhcCCe
Q 004348 231 ATLTYSQLLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGF----SSDSLAQRIMDCKPK 306 (759)
Q Consensus 231 ~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~----~~~~l~~il~~~~~~ 306 (759)
..+-.+-+. |.-.||..|++.| ..|..++.+....+... +.+.|.-+..++-.. ..+++...|++.+|+
T Consensus 10 ~~iG~GHv~-Rcl~LA~~l~~~g----~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHVM-RCLTLARALHAQG----AEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHHH-HHHHHHHHHHHCC----CEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 344455554 4678899998764 46777776665554443 357777666664322 245788999999999
Q ss_pred EEEEeCC
Q 004348 307 VVITSNA 313 (759)
Q Consensus 307 ~iit~~~ 313 (759)
++|++.-
T Consensus 83 ~vV~D~y 89 (279)
T TIGR03590 83 ILIVDHY 89 (279)
T ss_pred EEEEcCC
Confidence 9998753
No 256
>PRK08162 acyl-CoA synthetase; Validated
Probab=21.26 E-value=4e+02 Score=30.46 Aligned_cols=84 Identities=7% Similarity=-0.050 Sum_probs=60.0
Q ss_pred EEccchHHHHHHHHHH---HHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC
Q 004348 406 LHTTGGYMVHTATTFK---YAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV 482 (759)
Q Consensus 406 ~~th~~~l~~~~~~~~---~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v 482 (759)
.+|.+.+. ....... ...++.++|++....+-+... +..+++.+..|+..+..+.. ...+.+..++++.++
T Consensus 43 ~~ty~~L~-~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~---~~~~~~~~~l~~~~~ 116 (545)
T PRK08162 43 RRTWAETY-ARCRRLASALARRGIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTR---LDAASIAFMLRHGEA 116 (545)
T ss_pred EEEHHHHH-HHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccc---cChHHHHHHHHhCCC
Confidence 47777633 3222222 235889999999888877654 45678888899888877543 377899999999999
Q ss_pred cEEEehHHHHHHH
Q 004348 483 TIFYTAPTLVRSL 495 (759)
Q Consensus 483 T~l~~~Ps~l~~l 495 (759)
+.+++.+..+..+
T Consensus 117 ~~i~~~~~~~~~~ 129 (545)
T PRK08162 117 KVLIVDTEFAEVA 129 (545)
T ss_pred eEEEEccchhhHH
Confidence 9998877665443
No 257
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=21.05 E-value=5.7e+02 Score=27.97 Aligned_cols=62 Identities=11% Similarity=0.030 Sum_probs=42.0
Q ss_pred HcC-CCCCCEEEEEcCCChHHHHHHHHHHHhCCeEEecCCCCCHHHHHHHHHhcCCeEEEEeC
Q 004348 251 DIG-VKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSSDSLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 251 ~~G-v~~gd~Vai~~~~s~e~iva~LA~~kaGav~vpldp~~~~~~l~~il~~~~~~~iit~~ 312 (759)
+.| ++||....|....+-.-+..-++|...|.-+..+=|.........+++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 455 67885444556566666666677788898444444444444456888999999999864
No 258
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=20.96 E-value=6e+02 Score=28.81 Aligned_cols=89 Identities=11% Similarity=0.081 Sum_probs=47.8
Q ss_pred EEEEecCcchhchh-hHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC--CcEEEehHH----HHHHHHhcCCccc
Q 004348 431 VYWCTADCGWITGH-SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK--VTIFYTAPT----LVRSLMRDGNEYV 503 (759)
Q Consensus 431 ~~l~~~~l~~~~g~-~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~--vT~l~~~Ps----~l~~l~~~~~~~~ 503 (759)
+++..+|+.+-..+ .+.+..+|..|.++++-+..........+.+++.+.. ..++..++. ....|..+
T Consensus 138 Vv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~----- 212 (473)
T cd07097 138 VVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEH----- 212 (473)
T ss_pred eEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcC-----
Confidence 34455555544322 2456789999999998765543334556667776643 234444432 23333332
Q ss_pred ccCCCCCeeEEEEeCCCCCHHHHHHHHHH
Q 004348 504 TRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (759)
Q Consensus 504 ~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (759)
+.++.|.+.|. ....+.+.+.
T Consensus 213 -----~~v~~v~fTGs---~~~g~~i~~~ 233 (473)
T cd07097 213 -----PDVDAVSFTGS---TAVGRRIAAA 233 (473)
T ss_pred -----CCCCEEEEECc---HHHHHHHHHH
Confidence 34666666663 3444444443
No 259
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=20.86 E-value=6.1e+02 Score=28.61 Aligned_cols=51 Identities=20% Similarity=0.098 Sum_probs=35.7
Q ss_pred HHHcCCCCCCEEEEEcCCChHHHHHHHH-HHHhCCeEEec--C------------CCCCHHHHHHHHHhcC
Q 004348 249 LKDIGVKKGDAVIIYLPMLMELPIAMLA-CARIGAVHSVV--F------------AGFSSDSLAQRIMDCK 304 (759)
Q Consensus 249 L~~~Gv~~gd~Vai~~~~s~e~iva~LA-~~kaGav~vpl--d------------p~~~~~~l~~il~~~~ 304 (759)
|...+++|||.| .+..++.+.-+ +...|++++=+ + -++..+.++..++...
T Consensus 102 l~~l~l~pGDeV-----psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 102 LSQIAIKPGDYV-----PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred HHHhCCCCcCEE-----CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 346689999976 34666666776 68888866665 2 1347889999888643
No 260
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=20.86 E-value=1e+02 Score=24.75 Aligned_cols=20 Identities=35% Similarity=0.509 Sum_probs=16.0
Q ss_pred HHHHHHHHcCCCCCCEEEEE
Q 004348 244 QLANYLKDIGVKKGDAVIIY 263 (759)
Q Consensus 244 ~lA~~L~~~Gv~~gd~Vai~ 263 (759)
-+-..|+++|+++||.|-|.
T Consensus 44 Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 44 GVEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred CHHHHHHHcCCCCCCEEEEc
Confidence 34567788899999999875
No 261
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=20.79 E-value=1.6e+02 Score=31.70 Aligned_cols=79 Identities=27% Similarity=0.337 Sum_probs=52.7
Q ss_pred HHHhhcccccCCCeEEEEEEcCC-----CCcceeeeHHHHHHHHHHH---HHHH---------HHcCCCCCCEEEEEcCC
Q 004348 204 NCLDRNIEAGLGDKVAIYWEAND-----PGVDATLTYSQLLQQVCQL---ANYL---------KDIGVKKGDAVIIYLPM 266 (759)
Q Consensus 204 ~~l~~~~~~~~pd~~Al~~~~~~-----~~~~~~lTY~eL~~~a~~l---A~~L---------~~~Gv~~gd~Vai~~~~ 266 (759)
+.+++...+.+||.+|+--...+ ++....++..+..+.-+.. +.++ ++.|++||
T Consensus 28 eeVrr~I~~~~PDaVAVELd~~R~~sLl~~~~~~ldl~~vlk~Gk~~~~l~~~lLa~~Qrklg~~~Gv~PG--------- 98 (388)
T COG1916 28 EEVRRIILEEKPDAVAVELDEARLLSLLGGSREELDLAQVLKEGKAFFLLAGLLLAYFQRKLGKELGVKPG--------- 98 (388)
T ss_pred HHHHHHHHhcCCCeEEEEecHHHHHHHhcCCcccCCHHHHHHcCchHHHHHHHHHHHHHHHHHHhcCCCCh---------
Confidence 34444444489999999754321 1223368888877654443 3333 23477766
Q ss_pred ChHHHHHHHHHHHhCCeEEecCCCCC
Q 004348 267 LMELPIAMLACARIGAVHSVVFAGFS 292 (759)
Q Consensus 267 s~e~iva~LA~~kaGav~vpldp~~~ 292 (759)
-|+..|+-++...|+-..++|-+..
T Consensus 99 -sEmk~AIe~A~e~ga~V~lIDRdI~ 123 (388)
T COG1916 99 -SEMKAAIEAARELGAPVALIDRDIG 123 (388)
T ss_pred -HHHHHHHHHHHHcCCCEEEecccHH
Confidence 4999999999999999999997643
No 262
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=20.78 E-value=1.9e+02 Score=25.37 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCChHHHHHHHHHHHhCC
Q 004348 243 CQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGA 282 (759)
Q Consensus 243 ~~lA~~L~~~Gv~~gd~Vai~~~~s~e~iva~LA~~kaGa 282 (759)
..+...+...|+.+++.|.+++.++.....+......+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 3456667888999999999999988777777777777775
No 263
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=20.58 E-value=5.4e+02 Score=29.95 Aligned_cols=85 Identities=11% Similarity=-0.037 Sum_probs=59.6
Q ss_pred EEccchHHHHHHH--HHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCc
Q 004348 406 LHTTGGYMVHTAT--TFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (759)
Q Consensus 406 ~~th~~~l~~~~~--~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT 483 (759)
.+|.+.+...... ..-...++.++|++...++-+... +..+++.+..|+..+..+.. ...+.+..++++.+++
T Consensus 62 ~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~--v~~~lA~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~ 136 (600)
T PRK08279 62 SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY--LAAWLGLAKLGAVVALLNTQ---QRGAVLAHSLNLVDAK 136 (600)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCCC---CCHHHHHHHHHhcCCC
Confidence 3677664322211 111235788999999988877654 45678888999998887643 3678899999999999
Q ss_pred EEEehHHHHHHH
Q 004348 484 IFYTAPTLVRSL 495 (759)
Q Consensus 484 ~l~~~Ps~l~~l 495 (759)
++.+.......+
T Consensus 137 ~li~~~~~~~~~ 148 (600)
T PRK08279 137 HLIVGEELVEAF 148 (600)
T ss_pred EEEEChHHHHHH
Confidence 998877655544
No 264
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=20.51 E-value=4.6e+02 Score=30.02 Aligned_cols=86 Identities=17% Similarity=-0.035 Sum_probs=59.6
Q ss_pred EEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCCc
Q 004348 406 LHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKVT 483 (759)
Q Consensus 406 ~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~vT 483 (759)
.+|.+.+.... ....-...++.++|++....+-+... +..+++.+..|+..+..+.. ..++.+..++++.++.
T Consensus 39 ~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~---~~~~~l~~~l~~~~~~ 113 (542)
T PRK06018 39 RTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH--LEAWYGIMGIGAICHTVNPR---LFPEQIAWIINHAEDR 113 (542)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH--HHHHHHHHhcCeEeeccccc---cCHHHHHHHHhccCCC
Confidence 46777633221 11122235889999998888877654 34577888899988877643 3778999999999999
Q ss_pred EEEehHHHHHHHH
Q 004348 484 IFYTAPTLVRSLM 496 (759)
Q Consensus 484 ~l~~~Ps~l~~l~ 496 (759)
.+.+.......+.
T Consensus 114 ~i~~~~~~~~~~~ 126 (542)
T PRK06018 114 VVITDLTFVPILE 126 (542)
T ss_pred EEEEccccHHHHH
Confidence 9888766554443
No 265
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=20.42 E-value=8.4e+02 Score=27.41 Aligned_cols=89 Identities=9% Similarity=-0.009 Sum_probs=49.4
Q ss_pred EEEEecCcchhchh-hHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcCC--cEEEehH----HHHHHHHhcCCccc
Q 004348 431 VYWCTADCGWITGH-SYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYKV--TIFYTAP----TLVRSLMRDGNEYV 503 (759)
Q Consensus 431 ~~l~~~~l~~~~g~-~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~v--T~l~~~P----s~l~~l~~~~~~~~ 503 (759)
+++..+|+.|-..+ ...+..+|..|.++++-+..........+.+++++... .++..++ .....|+.+
T Consensus 120 Vv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~----- 194 (454)
T cd07109 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAH----- 194 (454)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcC-----
Confidence 45555555544322 33567899999999987654333345566777777532 2343333 233444433
Q ss_pred ccCCCCCeeEEEEeCCCCCHHHHHHHHHH
Q 004348 504 TRYSRKSLRVLGSVGEPINPSAWRWFFNV 532 (759)
Q Consensus 504 ~~~~l~sLr~v~~gGe~l~~~~~~~~~~~ 532 (759)
+.++.|.+.| +..+-+.+.+.
T Consensus 195 -----~~v~~v~ftG---s~~~g~~i~~~ 215 (454)
T cd07109 195 -----PGVDHISFTG---SVETGIAVMRA 215 (454)
T ss_pred -----CCCCEEEEEC---CHHHHHHHHHH
Confidence 3466777777 34444444443
No 266
>PRK15348 type III secretion system lipoprotein SsaJ; Provisional
Probab=20.39 E-value=5.4e+02 Score=26.52 Aligned_cols=70 Identities=14% Similarity=0.092 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCCccceEEEEeE-ecCCC---Ce--EEEEEEEEcCCCCCcHHHHHHHHHHHHhhcCCCccccEEEEeC
Q 004348 641 TAEVESALVSHPQCAEAAVVGV-EHEVK---GQ--GIYAFVTLVEGVPYSEELRKSLVLAVRKQIGAFAAPDKIHWAP 712 (759)
Q Consensus 641 ~~eIE~~L~~~p~V~ea~Vv~~-~~~~~---~~--~lva~Vv~~~~~~~~~~l~~~l~~~l~~~Lp~~~vP~~iv~v~ 712 (759)
-+|+|+.|.+.++|.+|-|... |+... .+ .-..++..+++.+.+ ...-.|+..+...+|. +-|..|-+++
T Consensus 109 egELarTI~~idgV~~ArVhL~lP~~~~~~~~~~asASV~I~~~~~~~~~-~~~v~I~~LVA~SV~g-L~~enVTVvd 184 (249)
T PRK15348 109 EQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNME-AFRVKIKDLIEMSIPG-LQYSKISILM 184 (249)
T ss_pred HHHHHHHHHhCCCeeEeEEEEECCCCCcccCCCCccEEEEEEeCCCCChH-HHHHHHHHHHHHhcCC-CCccceEEEe
Confidence 3799999999999999998654 32211 11 233444555554332 2222799999999885 4677777765
No 267
>PRK11761 cysM cysteine synthase B; Provisional
Probab=20.32 E-value=6.5e+02 Score=26.48 Aligned_cols=88 Identities=11% Similarity=0.105 Sum_probs=52.0
Q ss_pred eEEEEEEcCCCCcceeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCChHHHHHHHHHHHhCC-eEEecCCCCCHH
Q 004348 217 KVAIYWEANDPGVDATLTYSQLLQQVCQLANYLKDIG-VKKGDAVIIYLPMLMELPIAMLACARIGA-VHSVVFAGFSSD 294 (759)
Q Consensus 217 ~~Al~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~G-v~~gd~Vai~~~~s~e~iva~LA~~kaGa-v~vpldp~~~~~ 294 (759)
++-+-.+.. .-+-||+. +-+..+...+.+.| +++|+.|.. ...+=.-+..-++|.+.|. +.+.++...+.
T Consensus 28 ~i~~K~E~~----nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~- 99 (296)
T PRK11761 28 TILAKLEGN----NPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQ- 99 (296)
T ss_pred EEEEEEccc----CCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCH-
Confidence 455555532 22334443 33333444455566 477877655 4444445555567778888 44444555554
Q ss_pred HHHHHHHhcCCeEEEEeC
Q 004348 295 SLAQRIMDCKPKVVITSN 312 (759)
Q Consensus 295 ~l~~il~~~~~~~iit~~ 312 (759)
.....++..+++++++..
T Consensus 100 ~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 100 ERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHHHcCCEEEEeCC
Confidence 456677889999999975
No 268
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=20.14 E-value=7.6e+02 Score=29.55 Aligned_cols=89 Identities=8% Similarity=-0.073 Sum_probs=61.5
Q ss_pred EEEEccchHHHHH--HHHHHHHhCCCCCcEEEEecCcchhchhhHHHHHHhhcCcEEEEecCCCCCCChhHHHHHHHHcC
Q 004348 404 GVLHTTGGYMVHT--ATTFKYAFDYKPSDVYWCTADCGWITGHSYVTYGPMLNGASVVVFEGAPTYPDSGRSWDIVDKYK 481 (759)
Q Consensus 404 gV~~th~~~l~~~--~~~~~~~~~l~~~d~~l~~~~l~~~~g~~~~~~~~L~~G~tlvl~~~~~~~~d~~~l~~~i~~~~ 481 (759)
...+|.+.+.... +...-...++.++|++...++-+... +...++.+..|+..+..... .+++++..++++.+
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~~~---~~~~~l~~il~~s~ 193 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW--LASIYGIWSQSMVAATVYAN---LGEDALAYALRETE 193 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEeeCCC---CCHHHHHhhhhccC
Confidence 4567777633222 11122346899999998888766543 45678888899987776543 37889999999999
Q ss_pred CcEEEehHHHHHHHHh
Q 004348 482 VTIFYTAPTLVRSLMR 497 (759)
Q Consensus 482 vT~l~~~Ps~l~~l~~ 497 (759)
+.++++....+..+..
T Consensus 194 ~~~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 194 CKAIVCNGKNVPNLLR 209 (700)
T ss_pred ccEEEECHHHHHHHHH
Confidence 9999888776655544
No 269
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=20.03 E-value=2.8e+02 Score=32.42 Aligned_cols=70 Identities=10% Similarity=0.086 Sum_probs=49.3
Q ss_pred CcEEEeCCeeeccEeeCHHHHHHHHhc-CCccceEEEEeEecCCC--CeEEEEEEEEcCCCCCcHHHHHHHHHHHHhh
Q 004348 624 PGYYFTGDGCSSGHRIGTAEVESALVS-HPQCAEAAVVGVEHEVK--GQGIYAFVTLVEGVPYSEELRKSLVLAVRKQ 698 (759)
Q Consensus 624 ~g~y~TGDl~~~G~rI~~~eIE~~L~~-~p~V~ea~Vv~~~~~~~--~~~lva~Vv~~~~~~~~~~l~~~l~~~l~~~ 698 (759)
+.+++|-| .-|.+.+-|...++ +|+|..|.++....... -..+...|+++.+...+..++++|+++|.++
T Consensus 305 P~~~rt~~-----RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G~V~VvVvP~~g~~ls~~l~~~I~~yL~~r 377 (611)
T PHA02553 305 PRMREAQR-----RAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYGYVFIAVKPKSGLYLTDVQKEDIKNYLKKY 377 (611)
T ss_pred hHhhhccc-----ccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCceEEEEEecCCCCCCCHHHHHHHHHHHHhc
Confidence 34566654 46788999998877 79999998775322111 0245666777777777788889999999877
Done!