Citrus Sinensis ID: 004353

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------76

MSTVTIRPLLPSYRRANLNFRDRTNILLKPNYINYSIKSAPNARRFCSFKKLQKITVSSSTSTSTSPATSTDTTPVRPGDVFFKETFPLKRTHAVEGKMFVRLQKGKDEKNWQLSVGCNIPGKWILHWGVSFVGDNGSEWDQPPKKMRPPGSVSIKDYAIETPLKKLAEGDVFDQVNIDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFGLWPGALGQLSKMILKADTSQSGIQDSSSESCELKQENKHLEGFYEELPIVKEIIIENTVSVSVRKCPETAKTLLNLETDLTGDVVVHWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTLLQPKEGGKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPLTSSSCLPAESVQEMLIPGKAEEATQEVSQTAYTAGIIKEIRNLVSDFSSDISRKTKSKEAQKSILLEIEKLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSVSISVLHV

ccccccccccHHHHccccccccccccccccccccccccccccccccccccccccCECcccccccccccccccccccccccccEEEEEEcccEEEEccEEEEEEEccccccccEEEEECcccccEEEEEEEEEcccccccccccccccccccccccccEEEcccccccccccccEEEEEEEccccccEEEEEEEECcccccccccccccEEEEccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEEEEEEccccccEEEEEEccccccEEEEEEEEcccccccccccccccccccHHHHHHHHHcccccccccccEEEEEEcccccEEEEEEEEcccccECcccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHccccHHHHHHHHHHHHHHHHcHHccccccccHHHHHHHHHHccccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccc

**TVTIRPLLPSYRRANLNFRDRTNILLKPNYINYSIKSA*NARRFCSF***************************RPGDVFFKETFPLKRTHAVEGKMFVRLQKGKDEKNWQLSVGCNIPGKWILHWGVSFVGDNGSEWD**********SVSIKDYAIETPLKKLAEGDVFDQVNIDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFGLWPGALGQLSKMIL*************************LEGFYEELPIVKEIIIENTVSVSVRKCPETAKTLLNLETDLTGDVVVHWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTLLQPKEGGKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPLTS*********************TQEVSQTAYTAGIIKEIRNLVSDF****************ILLEIEKLAAEAYSIFRTTAPTFFEEAAV************PGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSVSIS****

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Alpha-amylase 3, chloroplastic	Possesses endoamylolytic activity in vitro, but seems not required for breakdown of transitory starch in leaves. May be involved in the determination of the final structure of glucans by shortening long linear phospho-oligosaccharides in the chloroplast stroma.	probable	Q94A41

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1HT6, chain A
Confidence level:very confident
Coverage over the Query: 509-753
View the alignment between query and template
View the model in PyMOL

Template: 2WC7, chain A
Confidence level:very confident
Coverage over the Query: 466-734
View the alignment between query and template
View the model in PyMOL

Template: 1EA9, chain C
Confidence level:very confident
Coverage over the Query: 349-733
View the alignment between query and template
View the model in PyMOL

Template: 2C3V, chain A
Confidence level:probable
Coverage over the Query: 121-215
View the alignment between query and template
View the model in PyMOL