Query 004354
Match_columns 759
No_of_seqs 641 out of 4115
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 22:33:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004354.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004354hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gjy_A Spermidine synthase; AP 99.9 5.1E-25 1.7E-29 236.1 22.9 181 498-721 62-251 (317)
2 3o4f_A Spermidine synthase; am 99.9 3.1E-23 1.1E-27 219.3 17.6 168 504-718 67-246 (294)
3 3c6k_A Spermine synthase; sper 99.9 5.9E-21 2E-25 207.5 19.9 174 504-717 190-378 (381)
4 1iy9_A Spermidine synthase; ro 99.9 4.3E-20 1.5E-24 195.3 23.1 167 504-718 59-237 (275)
5 2pxx_A Uncharacterized protein 99.9 1.3E-20 4.3E-25 189.4 17.9 180 23-214 2-201 (215)
6 1uir_A Polyamine aminopropyltr 99.8 3.6E-19 1.2E-23 191.8 23.3 185 504-732 61-259 (314)
7 1mjf_A Spermidine synthase; sp 99.8 2.2E-18 7.7E-23 182.7 22.6 165 504-717 59-239 (281)
8 2qfm_A Spermine synthase; sper 99.8 5E-18 1.7E-22 184.0 23.8 153 504-701 173-339 (364)
9 2i7c_A Spermidine synthase; tr 99.8 6.7E-18 2.3E-22 179.2 23.1 167 504-717 62-239 (283)
10 2b2c_A Spermidine synthase; be 99.8 1.3E-17 4.4E-22 179.5 22.0 167 504-717 92-269 (314)
11 1inl_A Spermidine synthase; be 99.8 1.5E-17 5.3E-22 177.6 21.4 168 504-717 74-252 (296)
12 3adn_A Spermidine synthase; am 99.8 2.1E-18 7.1E-23 184.1 13.6 168 504-718 67-246 (294)
13 3bwc_A Spermidine synthase; SA 99.7 5.1E-16 1.8E-20 166.4 22.9 169 504-718 79-259 (304)
14 2o07_A Spermidine synthase; st 99.7 2.2E-16 7.5E-21 169.2 19.8 167 504-717 79-256 (304)
15 2gb4_A Thiopurine S-methyltran 99.7 1.1E-16 3.8E-21 167.0 15.6 137 26-168 31-193 (252)
16 2cmg_A Spermidine synthase; tr 99.7 4.2E-16 1.4E-20 163.6 16.4 154 504-719 56-218 (262)
17 2pt6_A Spermidine synthase; tr 99.7 9.2E-16 3.1E-20 165.6 19.5 168 504-718 100-278 (321)
18 1xj5_A Spermidine synthase 1; 99.6 4.5E-15 1.5E-19 161.0 18.5 168 503-717 103-283 (334)
19 3v97_A Ribosomal RNA large sub 99.6 2.2E-12 7.6E-17 152.9 39.7 113 530-679 540-659 (703)
20 1pjz_A Thiopurine S-methyltran 99.6 1.3E-15 4.4E-20 153.3 10.0 100 67-167 21-141 (203)
21 2xvm_A Tellurite resistance pr 99.5 8E-14 2.7E-18 138.0 15.9 127 24-167 4-137 (199)
22 2a14_A Indolethylamine N-methy 99.5 4.5E-14 1.6E-18 147.7 12.8 141 24-167 14-198 (263)
23 3lcc_A Putative methyl chlorid 99.5 3.9E-14 1.3E-18 145.0 11.2 135 27-169 32-174 (235)
24 3ofk_A Nodulation protein S; N 99.5 5.4E-14 1.8E-18 141.7 12.0 135 26-169 12-157 (216)
25 4gek_A TRNA (CMO5U34)-methyltr 99.5 5.4E-14 1.8E-18 147.4 12.3 101 67-168 69-180 (261)
26 4hg2_A Methyltransferase type 99.5 2.6E-14 8.8E-19 149.5 9.2 108 52-170 28-139 (257)
27 3mti_A RRNA methylase; SAM-dep 99.5 3.1E-13 1.1E-17 132.9 15.6 139 67-210 21-183 (185)
28 3ggd_A SAM-dependent methyltra 99.5 2.7E-13 9.1E-18 139.5 15.5 139 26-170 14-167 (245)
29 3sm3_A SAM-dependent methyltra 99.5 6.4E-14 2.2E-18 142.3 10.4 130 27-170 2-145 (235)
30 3hnr_A Probable methyltransfer 99.5 5.3E-13 1.8E-17 134.6 17.0 96 68-167 45-146 (220)
31 1xtp_A LMAJ004091AAA; SGPP, st 99.5 2E-13 6.9E-18 140.7 14.1 100 67-167 92-198 (254)
32 2kw5_A SLR1183 protein; struct 99.5 5.2E-14 1.8E-18 140.3 8.5 130 30-170 1-135 (202)
33 1wzn_A SAM-dependent methyltra 99.5 2.7E-13 9.3E-18 139.9 14.0 130 28-166 9-145 (252)
34 2i62_A Nicotinamide N-methyltr 99.5 1.9E-13 6.6E-18 141.6 12.7 139 24-167 15-199 (265)
35 2p7i_A Hypothetical protein; p 99.5 1.1E-13 3.8E-18 141.5 10.7 99 68-170 42-145 (250)
36 3g5l_A Putative S-adenosylmeth 99.5 3.6E-13 1.2E-17 139.2 14.5 101 67-169 43-148 (253)
37 2ex4_A Adrenal gland protein A 99.5 6.8E-13 2.3E-17 136.3 16.2 100 68-167 79-186 (241)
38 3h2b_A SAM-dependent methyltra 99.5 6E-13 2.1E-17 132.7 15.0 108 53-169 30-144 (203)
39 3eey_A Putative rRNA methylase 99.5 9.2E-13 3.2E-17 130.8 15.8 142 67-212 21-189 (197)
40 3dlc_A Putative S-adenosyl-L-m 99.4 5.8E-13 2E-17 133.5 14.1 130 28-168 14-150 (219)
41 3jwg_A HEN1, methyltransferase 99.4 1.6E-12 5.3E-17 131.4 17.4 156 53-212 17-211 (219)
42 3cgg_A SAM-dependent methyltra 99.4 7.9E-13 2.7E-17 129.8 14.7 139 67-210 45-194 (195)
43 3e05_A Precorrin-6Y C5,15-meth 99.4 1E-12 3.5E-17 131.5 15.7 155 51-211 26-195 (204)
44 3thr_A Glycine N-methyltransfe 99.4 3.1E-13 1.1E-17 142.8 12.4 146 16-173 16-182 (293)
45 3g5t_A Trans-aconitate 3-methy 99.4 4E-13 1.4E-17 142.8 12.9 134 25-169 4-152 (299)
46 3dh0_A SAM dependent methyltra 99.4 6.8E-13 2.3E-17 133.8 13.8 109 57-168 29-145 (219)
47 3g2m_A PCZA361.24; SAM-depende 99.4 4.5E-13 1.5E-17 142.4 13.0 117 52-173 70-197 (299)
48 3kkz_A Uncharacterized protein 99.4 8.6E-13 2.9E-17 137.7 14.7 115 52-168 32-152 (267)
49 3l8d_A Methyltransferase; stru 99.4 4.2E-13 1.4E-17 137.3 11.9 111 51-169 41-156 (242)
50 3evz_A Methyltransferase; NYSG 99.4 3.6E-12 1.2E-16 129.7 18.8 144 67-215 54-224 (230)
51 3i9f_A Putative type 11 methyl 99.4 7.6E-13 2.6E-17 128.1 13.1 135 67-215 16-164 (170)
52 1nt2_A Fibrillarin-like PRE-rR 99.4 2.2E-12 7.4E-17 130.7 16.9 113 52-166 42-161 (210)
53 3f4k_A Putative methyltransfer 99.4 9.3E-13 3.2E-17 136.1 14.0 115 51-167 31-151 (257)
54 3e23_A Uncharacterized protein 99.4 1.4E-12 4.7E-17 131.0 14.9 96 67-168 42-143 (211)
55 2o57_A Putative sarcosine dime 99.4 1E-12 3.5E-17 139.1 14.5 102 67-169 81-190 (297)
56 3njr_A Precorrin-6Y methylase; 99.4 1.7E-12 5.8E-17 130.7 15.3 113 51-170 41-158 (204)
57 1ve3_A Hypothetical protein PH 99.4 8.5E-13 2.9E-17 133.5 13.1 105 68-173 38-149 (227)
58 3ujc_A Phosphoethanolamine N-m 99.4 4.1E-13 1.4E-17 139.1 10.8 110 58-169 45-162 (266)
59 3dtn_A Putative methyltransfer 99.4 2.1E-12 7.3E-17 131.6 15.7 116 51-169 29-151 (234)
60 3pfg_A N-methyltransferase; N, 99.4 7.8E-13 2.7E-17 137.6 12.7 128 28-169 19-154 (263)
61 3m70_A Tellurite resistance pr 99.4 1.5E-12 5.1E-17 137.3 14.8 99 68-167 120-224 (286)
62 1vl5_A Unknown conserved prote 99.4 9.1E-13 3.1E-17 136.8 12.7 108 57-168 29-142 (260)
63 3bkw_A MLL3908 protein, S-aden 99.4 1.6E-12 5.4E-17 132.9 13.2 108 56-168 34-146 (243)
64 3ccf_A Cyclopropane-fatty-acyl 99.4 7.8E-13 2.7E-17 139.0 11.0 105 57-169 49-157 (279)
65 1fbn_A MJ fibrillarin homologu 99.4 8.1E-12 2.8E-16 127.7 18.2 104 61-165 67-177 (230)
66 1y8c_A S-adenosylmethionine-de 99.4 2E-12 6.7E-17 132.2 13.5 121 48-170 18-146 (246)
67 1zx0_A Guanidinoacetate N-meth 99.4 5E-13 1.7E-17 137.1 9.0 102 67-168 59-172 (236)
68 1nkv_A Hypothetical protein YJ 99.4 1.8E-12 6.1E-17 133.9 13.1 114 51-167 22-141 (256)
69 4df3_A Fibrillarin-like rRNA/T 99.4 3E-12 1E-16 131.5 14.5 123 43-166 51-182 (233)
70 3ou2_A SAM-dependent methyltra 99.4 1.6E-12 5.4E-17 130.5 12.3 109 56-170 36-150 (218)
71 1l3i_A Precorrin-6Y methyltran 99.4 1.4E-12 4.9E-17 127.7 11.3 115 51-170 19-138 (192)
72 2ipx_A RRNA 2'-O-methyltransfe 99.4 9.7E-12 3.3E-16 127.2 17.9 121 46-167 55-183 (233)
73 3fpf_A Mtnas, putative unchara 99.4 1.2E-11 4E-16 131.1 18.9 124 66-193 120-251 (298)
74 3jwh_A HEN1; methyltransferase 99.4 3.5E-12 1.2E-16 128.8 14.0 111 54-167 18-142 (217)
75 2vdw_A Vaccinia virus capping 99.4 6.6E-13 2.3E-17 142.1 9.1 105 68-172 48-175 (302)
76 1ri5_A MRNA capping enzyme; me 99.4 1.7E-12 5.6E-17 137.0 12.0 108 67-174 63-182 (298)
77 2yqz_A Hypothetical protein TT 99.4 3.1E-12 1.1E-16 132.3 13.8 98 67-165 38-140 (263)
78 3dli_A Methyltransferase; PSI- 99.4 1.8E-12 6.3E-17 133.0 11.8 127 26-170 9-144 (240)
79 2p8j_A S-adenosylmethionine-de 99.4 2.3E-12 8E-17 128.7 12.1 103 67-170 22-132 (209)
80 2yxd_A Probable cobalt-precorr 99.4 4.1E-12 1.4E-16 123.6 13.5 131 51-190 21-155 (183)
81 3orh_A Guanidinoacetate N-meth 99.4 9.1E-13 3.1E-17 135.7 9.1 100 67-166 59-170 (236)
82 2gs9_A Hypothetical protein TT 99.4 3.6E-12 1.2E-16 127.8 12.9 96 68-170 36-136 (211)
83 1xxl_A YCGJ protein; structura 99.4 2.8E-12 9.7E-17 131.7 12.4 110 56-169 12-127 (239)
84 3grz_A L11 mtase, ribosomal pr 99.3 7.4E-12 2.5E-16 125.2 14.6 102 67-169 59-162 (205)
85 3p9n_A Possible methyltransfer 99.3 3.2E-12 1.1E-16 126.4 11.5 102 68-169 44-156 (189)
86 3hem_A Cyclopropane-fatty-acyl 99.3 7.2E-12 2.4E-16 133.3 14.9 110 60-170 64-187 (302)
87 3ege_A Putative methyltransfer 99.3 1.5E-12 5.2E-17 135.6 9.4 112 49-170 18-134 (261)
88 1dus_A MJ0882; hypothetical pr 99.3 1.1E-11 3.8E-16 121.5 15.1 114 52-169 39-160 (194)
89 4htf_A S-adenosylmethionine-de 99.3 3.5E-12 1.2E-16 134.4 12.1 102 68-170 68-177 (285)
90 3mgg_A Methyltransferase; NYSG 99.3 3.9E-12 1.3E-16 133.1 12.4 101 67-167 36-143 (276)
91 3bxo_A N,N-dimethyltransferase 99.3 4.8E-12 1.6E-16 129.0 12.6 128 28-169 9-144 (239)
92 3iv6_A Putative Zn-dependent a 99.3 3.1E-12 1.1E-16 133.8 11.4 109 53-166 33-148 (261)
93 2p35_A Trans-aconitate 2-methy 99.3 4.7E-12 1.6E-16 130.8 12.6 97 67-168 32-134 (259)
94 1kpg_A CFA synthase;, cyclopro 99.3 1E-11 3.4E-16 130.8 15.3 110 59-169 55-171 (287)
95 3gdh_A Trimethylguanosine synt 99.3 1.2E-13 4.1E-18 141.8 0.6 147 16-165 20-180 (241)
96 3e8s_A Putative SAM dependent 99.3 9.9E-12 3.4E-16 125.2 14.4 96 68-169 52-155 (227)
97 3d2l_A SAM-dependent methyltra 99.3 8.5E-12 2.9E-16 127.5 14.1 114 50-170 20-141 (243)
98 2frn_A Hypothetical protein PH 99.3 6E-12 2E-16 132.9 13.1 136 46-188 108-253 (278)
99 3bus_A REBM, methyltransferase 99.3 7.4E-12 2.5E-16 130.6 13.6 102 67-168 60-168 (273)
100 2fk8_A Methoxy mycolic acid sy 99.3 1E-11 3.6E-16 132.9 15.0 111 59-170 81-198 (318)
101 3vc1_A Geranyl diphosphate 2-C 99.3 6.4E-12 2.2E-16 134.5 13.0 103 66-169 115-224 (312)
102 3gu3_A Methyltransferase; alph 99.3 5.5E-12 1.9E-16 133.2 12.2 102 67-168 21-128 (284)
103 2avn_A Ubiquinone/menaquinone 99.3 7.7E-12 2.6E-16 130.1 13.2 109 51-170 42-156 (260)
104 3hm2_A Precorrin-6Y C5,15-meth 99.3 7.5E-12 2.6E-16 121.6 12.3 113 52-170 12-131 (178)
105 2g72_A Phenylethanolamine N-me 99.3 5.1E-12 1.7E-16 133.6 11.4 143 22-166 27-215 (289)
106 1g8a_A Fibrillarin-like PRE-rR 99.3 2E-11 6.9E-16 124.1 14.5 121 45-166 50-178 (227)
107 1jsx_A Glucose-inhibited divis 99.3 4.2E-11 1.4E-15 119.6 16.2 98 68-167 65-166 (207)
108 3tma_A Methyltransferase; thum 99.3 4E-11 1.4E-15 130.8 17.3 147 53-210 191-353 (354)
109 3id6_C Fibrillarin-like rRNA/T 99.3 4.8E-11 1.6E-15 122.6 16.7 120 46-166 54-181 (232)
110 1vbf_A 231AA long hypothetical 99.3 8.3E-12 2.9E-16 127.1 10.9 133 25-168 28-167 (231)
111 2ift_A Putative methylase HI07 99.3 9.2E-12 3.2E-16 124.9 10.9 102 68-169 53-166 (201)
112 3ckk_A TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4E-16 127.5 11.8 103 67-169 45-171 (235)
113 2esr_A Methyltransferase; stru 99.3 1.3E-11 4.4E-16 120.4 11.1 117 52-170 17-142 (177)
114 3fpf_A Mtnas, putative unchara 99.3 8.5E-12 2.9E-16 132.1 10.5 165 528-743 121-290 (298)
115 3g07_A 7SK snRNA methylphospha 99.3 1.1E-11 3.6E-16 131.8 11.3 99 68-166 46-220 (292)
116 3lbf_A Protein-L-isoaspartate 99.3 9E-12 3.1E-16 124.9 10.0 110 51-168 63-176 (210)
117 1vlm_A SAM-dependent methyltra 99.3 2E-11 6.8E-16 123.5 12.0 91 69-170 48-143 (219)
118 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.6E-11 8.9E-16 122.3 12.6 101 68-168 41-158 (214)
119 3lpm_A Putative methyltransfer 99.3 6.8E-11 2.3E-15 123.1 16.1 152 56-213 39-221 (259)
120 3bgv_A MRNA CAP guanine-N7 met 99.3 1.8E-11 6.2E-16 130.9 11.9 109 68-176 34-165 (313)
121 3m33_A Uncharacterized protein 99.2 1.6E-11 5.5E-16 125.1 10.0 124 26-163 6-139 (226)
122 2fhp_A Methylase, putative; al 99.2 1.1E-11 3.6E-16 121.5 8.1 117 51-169 29-157 (187)
123 3dxy_A TRNA (guanine-N(7)-)-me 99.2 1.4E-11 4.7E-16 125.5 9.0 103 68-170 34-154 (218)
124 2fyt_A Protein arginine N-meth 99.2 7.9E-12 2.7E-16 135.9 7.7 107 53-163 52-168 (340)
125 2fca_A TRNA (guanine-N(7)-)-me 99.2 2.1E-11 7.1E-16 123.5 10.2 102 68-169 38-156 (213)
126 1p91_A Ribosomal RNA large sub 99.2 1.5E-11 5.2E-16 128.2 9.4 96 68-172 85-184 (269)
127 3q87_B N6 adenine specific DNA 99.2 9.1E-11 3.1E-15 114.4 14.2 110 68-190 23-147 (170)
128 2pwy_A TRNA (adenine-N(1)-)-me 99.2 1.9E-10 6.3E-15 118.8 16.6 110 55-170 86-202 (258)
129 3fzg_A 16S rRNA methylase; met 99.2 5.6E-11 1.9E-15 117.5 12.0 140 49-194 35-190 (200)
130 2ozv_A Hypothetical protein AT 99.2 2.2E-10 7.4E-15 119.7 17.2 151 57-214 28-215 (260)
131 1ws6_A Methyltransferase; stru 99.2 1.2E-11 4E-16 119.3 6.9 102 68-170 41-151 (171)
132 3uwp_A Histone-lysine N-methyl 99.2 4.5E-11 1.5E-15 131.3 12.3 103 67-169 172-291 (438)
133 2fpo_A Methylase YHHF; structu 99.2 2.8E-11 9.6E-16 121.4 9.8 101 68-168 54-162 (202)
134 2nxc_A L11 mtase, ribosomal pr 99.2 8.8E-11 3E-15 122.2 13.6 101 67-169 119-221 (254)
135 3htx_A HEN1; HEN1, small RNA m 99.2 2.3E-10 7.8E-15 134.2 17.8 151 56-210 712-916 (950)
136 1xdz_A Methyltransferase GIDB; 99.2 3.7E-11 1.3E-15 123.6 10.1 143 68-215 70-223 (240)
137 3dmg_A Probable ribosomal RNA 99.2 6E-11 2E-15 130.9 12.3 101 68-169 233-343 (381)
138 4fsd_A Arsenic methyltransfera 99.2 3.8E-11 1.3E-15 132.5 10.7 102 67-168 82-205 (383)
139 3g89_A Ribosomal RNA small sub 99.2 6.1E-11 2.1E-15 123.2 11.5 144 67-215 79-233 (249)
140 3q7e_A Protein arginine N-meth 99.2 4.7E-11 1.6E-15 130.2 10.9 96 67-163 65-170 (349)
141 3ocj_A Putative exported prote 99.2 3.6E-11 1.2E-15 128.2 9.6 104 67-170 117-231 (305)
142 2yxe_A Protein-L-isoaspartate 99.2 3.7E-11 1.3E-15 120.8 9.2 135 25-168 37-179 (215)
143 1yb2_A Hypothetical protein TA 99.2 1.4E-10 4.9E-15 121.8 14.1 100 67-169 109-214 (275)
144 1wy7_A Hypothetical protein PH 99.2 4.2E-10 1.4E-14 112.4 16.6 112 51-164 32-147 (207)
145 2zfu_A Nucleomethylin, cerebra 99.2 6.6E-11 2.3E-15 119.0 10.8 121 67-214 66-194 (215)
146 3lec_A NADB-rossmann superfami 99.2 2.7E-10 9.2E-15 116.6 14.8 139 67-211 20-164 (230)
147 2pjd_A Ribosomal RNA small sub 99.2 6.9E-11 2.4E-15 128.5 11.0 114 53-169 184-306 (343)
148 1af7_A Chemotaxis receptor met 99.2 1.1E-10 3.6E-15 123.1 11.8 133 28-165 69-251 (274)
149 2aot_A HMT, histamine N-methyl 99.2 4.4E-11 1.5E-15 126.7 8.8 103 67-169 51-175 (292)
150 3gnl_A Uncharacterized protein 99.2 2.6E-10 8.8E-15 117.7 14.2 140 67-212 20-165 (244)
151 3r0q_C Probable protein argini 99.2 8.1E-11 2.8E-15 129.6 11.2 99 67-166 62-169 (376)
152 4dcm_A Ribosomal RNA large sub 99.2 1.3E-10 4.6E-15 127.8 12.7 114 54-170 211-338 (375)
153 3kr9_A SAM-dependent methyltra 99.1 3.2E-10 1.1E-14 115.8 14.5 139 67-211 14-158 (225)
154 4dzr_A Protein-(glutamine-N5) 99.1 3.6E-11 1.2E-15 120.0 7.1 114 53-168 17-166 (215)
155 1ne2_A Hypothetical protein TA 99.1 1.9E-10 6.5E-15 114.5 12.3 94 67-166 50-147 (200)
156 3dr5_A Putative O-methyltransf 99.1 9.5E-11 3.2E-15 119.5 10.1 101 531-676 58-162 (221)
157 1u2z_A Histone-lysine N-methyl 99.1 6.7E-10 2.3E-14 123.9 17.3 100 67-166 241-359 (433)
158 2vdv_E TRNA (guanine-N(7)-)-me 99.1 1.5E-10 5E-15 119.6 11.2 101 68-168 49-175 (246)
159 2y1w_A Histone-arginine methyl 99.1 1.2E-10 4E-15 127.0 10.6 108 54-165 39-154 (348)
160 3cc8_A Putative methyltransfer 99.1 1.1E-10 3.9E-15 117.6 9.6 97 67-170 31-134 (230)
161 1jg1_A PIMT;, protein-L-isoasp 99.1 1.4E-10 4.6E-15 118.9 9.9 136 24-168 50-191 (235)
162 3orh_A Guanidinoacetate N-meth 99.1 1.4E-10 4.6E-15 119.4 9.8 109 528-675 59-168 (236)
163 3c3y_A Pfomt, O-methyltransfer 99.1 2.1E-10 7.1E-15 118.1 11.1 108 528-676 69-180 (237)
164 3ntv_A MW1564 protein; rossman 99.1 2.2E-10 7.4E-15 117.4 11.2 111 51-165 57-175 (232)
165 1sui_A Caffeoyl-COA O-methyltr 99.1 3.1E-10 1E-14 117.7 12.1 108 528-676 78-189 (247)
166 3bkx_A SAM-dependent methyltra 99.1 3E-10 1E-14 118.5 12.1 103 67-169 42-162 (275)
167 3mb5_A SAM-dependent methyltra 99.1 2.9E-10 9.8E-15 117.5 11.8 112 52-169 80-197 (255)
168 1g6q_1 HnRNP arginine N-methyl 99.1 2.8E-10 9.7E-15 122.9 12.2 95 68-163 38-142 (328)
169 3p2e_A 16S rRNA methylase; met 99.1 1.2E-10 4.2E-15 119.1 8.8 99 68-166 24-139 (225)
170 3duw_A OMT, O-methyltransferas 99.1 8.6E-10 2.9E-14 111.6 14.7 107 529-678 58-168 (223)
171 3tfw_A Putative O-methyltransf 99.1 4E-10 1.4E-14 116.7 12.5 105 529-678 63-171 (248)
172 3mq2_A 16S rRNA methyltransfer 99.1 1.9E-10 6.4E-15 116.1 9.7 99 67-166 26-140 (218)
173 3dou_A Ribosomal RNA large sub 99.1 7.7E-10 2.6E-14 110.2 13.9 94 67-171 24-144 (191)
174 3adn_A Spermidine synthase; am 99.1 3.5E-10 1.2E-14 120.4 11.8 99 68-166 83-198 (294)
175 3duw_A OMT, O-methyltransferas 99.1 2.8E-10 9.7E-15 115.1 10.5 100 67-167 57-168 (223)
176 3tfw_A Putative O-methyltransf 99.1 3E-10 1E-14 117.6 10.6 100 67-167 62-171 (248)
177 2b3t_A Protein methyltransfera 99.1 1.7E-10 5.8E-15 121.3 8.8 99 68-166 109-238 (276)
178 2qe6_A Uncharacterized protein 99.1 1.2E-09 4.2E-14 115.0 15.3 101 68-169 77-199 (274)
179 3dr5_A Putative O-methyltransf 99.1 2.5E-10 8.7E-15 116.3 9.7 98 68-166 56-163 (221)
180 1i9g_A Hypothetical protein RV 99.1 4.1E-10 1.4E-14 118.0 11.6 112 53-170 87-207 (280)
181 2igt_A SAM dependent methyltra 99.1 4.3E-10 1.5E-14 121.8 12.0 119 46-167 133-273 (332)
182 2b25_A Hypothetical protein; s 99.1 4.7E-10 1.6E-14 121.3 12.1 116 51-172 91-225 (336)
183 1ej0_A FTSJ; methyltransferase 99.1 8E-10 2.7E-14 106.1 12.4 94 67-170 21-140 (180)
184 1nv8_A HEMK protein; class I a 99.1 1.8E-10 6.1E-15 122.1 8.4 99 68-166 123-249 (284)
185 3ntv_A MW1564 protein; rossman 99.1 4.1E-10 1.4E-14 115.3 10.8 101 529-676 71-175 (232)
186 3tr6_A O-methyltransferase; ce 99.1 3.3E-10 1.1E-14 114.7 9.5 99 68-167 64-175 (225)
187 4e2x_A TCAB9; kijanose, tetron 99.0 8.7E-11 3E-15 130.8 5.6 100 67-168 106-210 (416)
188 3a27_A TYW2, uncharacterized p 99.0 6.2E-10 2.1E-14 117.1 11.8 101 67-169 118-222 (272)
189 1o54_A SAM-dependent O-methylt 99.0 2.5E-09 8.6E-14 112.2 16.4 100 67-169 111-216 (277)
190 3r3h_A O-methyltransferase, SA 99.0 1.7E-10 5.9E-15 119.2 7.2 107 529-677 60-170 (242)
191 4dmg_A Putative uncharacterize 99.0 5.4E-10 1.8E-14 123.7 11.5 118 46-169 197-329 (393)
192 1dl5_A Protein-L-isoaspartate 99.0 5.6E-10 1.9E-14 119.9 11.4 109 52-167 62-176 (317)
193 3u81_A Catechol O-methyltransf 99.0 3.6E-10 1.2E-14 114.6 8.9 113 52-168 45-172 (221)
194 2gpy_A O-methyltransferase; st 99.0 5.4E-10 1.9E-14 114.0 10.3 115 49-167 38-161 (233)
195 2pbf_A Protein-L-isoaspartate 99.0 8.2E-10 2.8E-14 112.0 11.3 111 52-167 65-194 (227)
196 1i1n_A Protein-L-isoaspartate 99.0 6.6E-10 2.3E-14 112.6 10.5 111 53-168 63-184 (226)
197 3tm4_A TRNA (guanine N2-)-meth 99.0 2.4E-09 8.3E-14 117.7 15.7 146 52-210 205-366 (373)
198 3bzb_A Uncharacterized protein 99.0 1.8E-09 6.1E-14 114.0 14.0 100 67-166 78-205 (281)
199 3c3p_A Methyltransferase; NP_9 99.0 6.8E-10 2.3E-14 111.4 10.3 100 529-676 56-159 (210)
200 2bm8_A Cephalosporin hydroxyla 99.0 1.9E-10 6.4E-15 118.5 6.3 108 52-167 68-188 (236)
201 3tr6_A O-methyltransferase; ce 99.0 9.8E-10 3.3E-14 111.2 11.5 107 529-677 64-174 (225)
202 4azs_A Methyltransferase WBDD; 99.0 2.8E-10 9.6E-15 132.0 8.4 100 68-168 66-175 (569)
203 2r3s_A Uncharacterized protein 99.0 1.4E-09 4.9E-14 116.9 13.3 102 67-169 164-274 (335)
204 1sui_A Caffeoyl-COA O-methyltr 99.0 7.6E-10 2.6E-14 114.7 10.4 98 68-166 79-190 (247)
205 3b3j_A Histone-arginine methyl 99.0 8.8E-10 3E-14 125.1 11.7 97 67-164 157-261 (480)
206 3dp7_A SAM-dependent methyltra 99.0 1.6E-09 5.5E-14 118.5 13.2 100 68-168 179-289 (363)
207 2yvl_A TRMI protein, hypotheti 99.0 2.5E-09 8.4E-14 109.7 13.7 107 56-169 82-193 (248)
208 1o9g_A RRNA methyltransferase; 99.0 4.3E-10 1.5E-14 116.2 7.8 102 68-169 51-217 (250)
209 3opn_A Putative hemolysin; str 99.0 1.4E-10 4.8E-15 119.2 4.0 96 68-166 37-137 (232)
210 2plw_A Ribosomal RNA methyltra 99.0 4.7E-09 1.6E-13 104.1 14.7 94 67-170 21-158 (201)
211 3sso_A Methyltransferase; macr 99.0 1.2E-09 4.2E-14 119.7 11.3 94 68-169 216-327 (419)
212 3hp7_A Hemolysin, putative; st 99.0 6.4E-10 2.2E-14 117.8 8.8 93 68-165 85-184 (291)
213 3bwc_A Spermidine synthase; SA 99.0 1.1E-09 3.9E-14 117.0 10.5 101 68-168 95-212 (304)
214 2avd_A Catechol-O-methyltransf 99.0 1.5E-09 5E-14 110.2 10.9 107 528-676 68-178 (229)
215 1mjf_A Spermidine synthase; sp 99.0 1.6E-09 5.6E-14 114.4 11.1 100 68-167 75-194 (281)
216 3c3p_A Methyltransferase; NP_9 99.0 5.4E-10 1.8E-14 112.2 7.0 97 68-166 56-160 (210)
217 3r3h_A O-methyltransferase, SA 99.0 2.8E-10 9.5E-15 117.6 4.9 112 52-167 47-171 (242)
218 2b78_A Hypothetical protein SM 99.0 1.9E-09 6.4E-14 119.1 11.8 119 46-169 195-334 (385)
219 3cbg_A O-methyltransferase; cy 99.0 1.8E-09 6.2E-14 110.5 10.8 107 529-677 72-182 (232)
220 2f8l_A Hypothetical protein LM 99.0 8.4E-09 2.9E-13 112.0 16.7 144 67-213 129-307 (344)
221 2hnk_A SAM-dependent O-methylt 99.0 1.9E-09 6.5E-14 110.6 10.7 113 51-167 46-182 (239)
222 4hc4_A Protein arginine N-meth 99.0 1.5E-09 5.2E-14 119.1 10.6 95 68-163 83-186 (376)
223 3c0k_A UPF0064 protein YCCW; P 99.0 2.7E-09 9.4E-14 118.1 12.7 118 46-169 204-342 (396)
224 1r18_A Protein-L-isoaspartate( 99.0 1.4E-09 4.9E-14 110.5 9.6 112 52-168 69-196 (227)
225 2as0_A Hypothetical protein PH 99.0 1.8E-09 6.1E-14 119.6 11.1 102 68-169 217-338 (396)
226 1iy9_A Spermidine synthase; ro 99.0 1.5E-09 5.2E-14 114.3 10.0 101 68-168 75-191 (275)
227 3u81_A Catechol O-methyltransf 98.9 2.7E-09 9.2E-14 108.1 11.4 112 529-680 58-173 (221)
228 3ajd_A Putative methyltransfer 98.9 1.6E-09 5.6E-14 113.9 10.0 110 56-168 74-213 (274)
229 1x19_A CRTF-related protein; m 98.9 5.2E-09 1.8E-13 114.1 14.3 102 67-169 189-298 (359)
230 4dzr_A Protein-(glutamine-N5) 98.9 1.6E-09 5.6E-14 107.8 9.5 160 528-718 29-206 (215)
231 2yx1_A Hypothetical protein MJ 98.9 1.9E-09 6.6E-14 116.8 10.6 98 68-169 195-294 (336)
232 1inl_A Spermidine synthase; be 98.9 1.8E-09 6.3E-14 114.9 10.2 101 68-168 90-207 (296)
233 3i53_A O-methyltransferase; CO 98.9 4.6E-09 1.6E-13 113.2 13.4 101 67-168 168-276 (332)
234 3dxy_A TRNA (guanine-N(7)-)-me 98.9 5.2E-09 1.8E-13 106.4 13.1 133 529-695 34-166 (218)
235 1xj5_A Spermidine synthase 1; 98.9 1.6E-09 5.4E-14 117.4 9.5 98 68-165 120-234 (334)
236 1uir_A Polyamine aminopropyltr 98.9 1.6E-09 5.3E-14 116.4 9.4 100 68-167 77-196 (314)
237 3c3y_A Pfomt, O-methyltransfer 98.9 2.8E-09 9.5E-14 109.6 10.8 98 68-166 70-181 (237)
238 1ixk_A Methyltransferase; open 98.9 3.2E-09 1.1E-13 114.1 11.6 111 55-168 108-248 (315)
239 1qzz_A RDMB, aclacinomycin-10- 98.9 5.5E-09 1.9E-13 114.3 13.4 100 67-167 181-288 (374)
240 2pt6_A Spermidine synthase; tr 98.9 2.5E-09 8.4E-14 115.3 10.4 101 68-168 116-232 (321)
241 3gwz_A MMCR; methyltransferase 98.9 1E-08 3.5E-13 112.4 15.5 101 67-168 201-309 (369)
242 2b2c_A Spermidine synthase; be 98.9 2.2E-09 7.6E-14 115.2 9.9 99 68-166 108-222 (314)
243 3v97_A Ribosomal RNA large sub 98.9 3.3E-09 1.1E-13 125.7 12.2 117 46-168 523-659 (703)
244 2o07_A Spermidine synthase; st 98.9 1.9E-09 6.6E-14 115.2 9.2 99 68-166 95-209 (304)
245 2i7c_A Spermidine synthase; tr 98.9 2.7E-09 9.1E-14 112.9 10.2 100 68-167 78-193 (283)
246 3k6r_A Putative transferase PH 98.9 3.9E-09 1.3E-13 111.2 11.0 117 46-169 108-228 (278)
247 2cmg_A Spermidine synthase; tr 98.9 2.2E-09 7.5E-14 112.4 9.0 96 68-167 72-172 (262)
248 2avd_A Catechol-O-methyltransf 98.9 3.6E-09 1.2E-13 107.3 10.3 111 52-166 56-179 (229)
249 1zq9_A Probable dimethyladenos 98.9 7.8E-09 2.7E-13 109.4 12.9 109 51-163 14-144 (285)
250 2nyu_A Putative ribosomal RNA 98.9 1.7E-08 5.9E-13 99.5 14.5 94 67-170 21-149 (196)
251 3frh_A 16S rRNA methylase; met 98.9 2.1E-08 7.1E-13 102.6 15.4 126 67-194 104-244 (253)
252 2gpy_A O-methyltransferase; st 98.9 3.9E-09 1.3E-13 107.6 9.9 103 529-676 54-159 (233)
253 3gjy_A Spermidine synthase; AP 98.9 2.8E-09 9.6E-14 114.1 9.1 101 69-169 90-203 (317)
254 1tw3_A COMT, carminomycin 4-O- 98.9 7.5E-09 2.6E-13 112.7 12.6 101 67-168 182-290 (360)
255 2hnk_A SAM-dependent O-methylt 98.9 9.1E-09 3.1E-13 105.5 12.4 116 529-677 60-181 (239)
256 2ozv_A Hypothetical protein AT 98.9 1.6E-08 5.4E-13 105.5 14.3 159 528-717 35-211 (260)
257 3cbg_A O-methyltransferase; cy 98.9 3.3E-09 1.1E-13 108.5 8.9 112 52-167 59-183 (232)
258 3hm2_A Precorrin-6Y C5,15-meth 98.9 1.6E-08 5.6E-13 97.8 12.8 126 528-702 24-150 (178)
259 2qm3_A Predicted methyltransfe 98.9 8.6E-09 2.9E-13 113.2 12.0 99 68-167 172-279 (373)
260 2h1r_A Dimethyladenosine trans 98.9 7.9E-09 2.7E-13 110.2 11.4 88 51-142 28-117 (299)
261 3mcz_A O-methyltransferase; ad 98.8 6.8E-09 2.3E-13 112.6 10.7 99 69-168 180-289 (352)
262 2wa2_A Non-structural protein 98.8 1.6E-09 5.4E-14 114.3 5.4 100 67-169 81-196 (276)
263 2ih2_A Modification methylase 98.8 8.5E-09 2.9E-13 114.5 11.6 147 50-212 24-212 (421)
264 3p9n_A Possible methyltransfer 98.8 2.1E-08 7.3E-13 98.7 13.1 108 529-680 44-156 (189)
265 3e05_A Precorrin-6Y C5,15-meth 98.8 8.7E-09 3E-13 102.7 10.3 117 528-695 39-158 (204)
266 1dus_A MJ0882; hypothetical pr 98.8 3.2E-08 1.1E-12 96.6 13.7 138 529-715 52-192 (194)
267 2ip2_A Probable phenazine-spec 98.8 1.1E-08 3.9E-13 110.0 11.4 98 70-168 169-274 (334)
268 1yzh_A TRNA (guanine-N(7)-)-me 98.8 2.2E-08 7.6E-13 100.7 12.7 129 529-695 41-172 (214)
269 2fca_A TRNA (guanine-N(7)-)-me 98.8 3.7E-08 1.3E-12 99.4 14.0 132 529-695 38-169 (213)
270 2okc_A Type I restriction enzy 98.8 4.3E-08 1.5E-12 110.2 15.7 162 45-213 152-359 (445)
271 3giw_A Protein of unknown func 98.8 2E-08 6.7E-13 105.3 11.9 101 69-169 79-203 (277)
272 2oxt_A Nucleoside-2'-O-methylt 98.8 1.9E-09 6.4E-14 113.1 4.2 99 67-168 73-187 (265)
273 3lcv_B Sisomicin-gentamicin re 98.8 1.5E-08 5.2E-13 104.6 10.7 126 68-194 132-274 (281)
274 2h00_A Methyltransferase 10 do 98.8 9.2E-09 3.1E-13 106.3 9.1 114 52-165 47-191 (254)
275 1wxx_A TT1595, hypothetical pr 98.8 9.9E-09 3.4E-13 113.1 9.7 101 68-169 209-328 (382)
276 1zx0_A Guanidinoacetate N-meth 98.8 1.5E-08 5.3E-13 103.5 10.4 108 529-675 60-168 (236)
277 3lst_A CALO1 methyltransferase 98.8 1.8E-08 6.3E-13 109.4 11.3 98 67-168 183-288 (348)
278 2esr_A Methyltransferase; stru 98.8 2E-08 6.9E-13 97.5 10.2 108 529-681 31-142 (177)
279 3mb5_A SAM-dependent methyltra 98.8 4.2E-08 1.5E-12 101.1 13.2 122 528-702 92-220 (255)
280 3lpm_A Putative methyltransfer 98.8 3.2E-08 1.1E-12 102.8 12.2 154 529-717 49-218 (259)
281 1xdz_A Methyltransferase GIDB; 98.8 2.6E-08 9E-13 102.1 11.1 119 529-694 70-191 (240)
282 2jjq_A Uncharacterized RNA met 98.8 2.4E-08 8.3E-13 111.5 11.4 98 67-166 289-387 (425)
283 1sqg_A SUN protein, FMU protei 98.7 2.3E-08 8E-13 111.9 10.9 113 53-168 234-376 (429)
284 3m6w_A RRNA methylase; rRNA me 98.7 1.7E-08 5.8E-13 113.6 9.4 111 55-168 91-231 (464)
285 4gek_A TRNA (CMO5U34)-methyltr 98.7 4.9E-08 1.7E-12 102.0 12.2 102 528-676 69-177 (261)
286 3evz_A Methyltransferase; NYSG 98.7 8E-08 2.7E-12 97.3 13.4 156 528-718 54-221 (230)
287 2qy6_A UPF0209 protein YFCK; s 98.7 2.5E-08 8.4E-13 104.0 9.5 149 528-718 59-248 (257)
288 2yxl_A PH0851 protein, 450AA l 98.7 4.1E-08 1.4E-12 110.5 11.9 111 55-168 249-391 (450)
289 1fp1_D Isoliquiritigenin 2'-O- 98.7 1.9E-08 6.5E-13 110.2 8.6 96 67-168 208-308 (372)
290 3ckk_A TRNA (guanine-N(7)-)-me 98.7 6.2E-08 2.1E-12 99.5 11.8 133 528-694 45-183 (235)
291 3ajd_A Putative methyltransfer 98.7 1.1E-07 3.9E-12 99.7 14.0 138 529-700 83-234 (274)
292 1fp2_A Isoflavone O-methyltran 98.7 2.2E-08 7.6E-13 108.8 8.8 96 67-168 187-290 (352)
293 3njr_A Precorrin-6Y methylase; 98.7 1.7E-07 5.9E-12 93.9 14.5 120 528-701 54-176 (204)
294 2p41_A Type II methyltransfera 98.7 8.9E-09 3E-13 110.1 5.3 99 67-169 81-194 (305)
295 3g89_A Ribosomal RNA small sub 98.7 9.7E-08 3.3E-12 99.0 13.0 103 528-677 79-184 (249)
296 2bm8_A Cephalosporin hydroxyla 98.7 1.3E-08 4.4E-13 104.7 6.0 100 529-677 81-187 (236)
297 3p9c_A Caffeic acid O-methyltr 98.7 6.8E-08 2.3E-12 105.7 12.0 96 67-168 200-300 (364)
298 2vdv_E TRNA (guanine-N(7)-)-me 98.7 6.9E-08 2.4E-12 99.5 11.4 129 529-694 49-188 (246)
299 3reo_A (ISO)eugenol O-methyltr 98.7 5.2E-08 1.8E-12 106.8 11.1 96 67-168 202-302 (368)
300 2frx_A Hypothetical protein YE 98.7 5.2E-08 1.8E-12 110.4 11.3 101 68-168 117-248 (479)
301 3dlc_A Putative S-adenosyl-L-m 98.7 1.2E-07 4.3E-12 94.3 12.7 106 530-679 44-150 (219)
302 1l3i_A Precorrin-6Y methyltran 98.7 2.2E-07 7.6E-12 90.4 14.2 119 528-696 32-152 (192)
303 2igt_A SAM dependent methyltra 98.7 1.6E-07 5.6E-12 101.5 14.4 133 528-697 152-292 (332)
304 4a6d_A Hydroxyindole O-methylt 98.7 2.1E-07 7.2E-12 101.4 15.4 101 67-168 178-285 (353)
305 3m4x_A NOL1/NOP2/SUN family pr 98.7 4.1E-08 1.4E-12 110.4 9.7 111 55-168 95-236 (456)
306 1jsx_A Glucose-inhibited divis 98.6 7.1E-08 2.4E-12 96.0 10.0 104 530-681 66-169 (207)
307 3m6w_A RRNA methylase; rRNA me 98.6 2.5E-07 8.7E-12 104.1 15.7 134 528-699 100-251 (464)
308 3eey_A Putative rRNA methylase 98.6 6.9E-08 2.4E-12 95.4 9.8 118 529-680 22-142 (197)
309 2fhp_A Methylase, putative; al 98.6 1.1E-07 3.9E-12 92.6 11.3 111 529-680 44-157 (187)
310 3bt7_A TRNA (uracil-5-)-methyl 98.6 5.2E-08 1.8E-12 106.9 9.7 99 69-172 214-332 (369)
311 2b3t_A Protein methyltransfera 98.6 1.5E-07 5.2E-12 98.6 12.6 147 529-715 109-274 (276)
312 1ws6_A Methyltransferase; stru 98.6 6.1E-08 2.1E-12 93.0 8.7 109 529-681 41-151 (171)
313 1uwv_A 23S rRNA (uracil-5-)-me 98.6 4.6E-07 1.6E-11 101.5 17.2 127 55-188 276-410 (433)
314 1g8a_A Fibrillarin-like PRE-rR 98.6 2E-07 6.8E-12 94.4 12.8 144 528-715 72-225 (227)
315 1fbn_A MJ fibrillarin homologu 98.6 2.7E-07 9.2E-12 94.0 13.6 143 529-716 74-227 (230)
316 2ld4_A Anamorsin; methyltransf 98.6 2E-08 7E-13 97.6 5.0 83 66-166 10-101 (176)
317 2pwy_A TRNA (adenine-N(1)-)-me 98.6 1.2E-07 4E-12 97.6 10.9 120 528-697 95-217 (258)
318 3mti_A RRNA methylase; SAM-dep 98.6 3.8E-08 1.3E-12 96.3 6.8 114 528-680 21-138 (185)
319 3ldu_A Putative methylase; str 98.6 1.6E-07 5.6E-12 103.5 12.5 114 53-169 183-347 (385)
320 3dtn_A Putative methyltransfer 98.6 1.5E-07 5.1E-12 95.5 11.1 105 528-679 43-150 (234)
321 2p35_A Trans-aconitate 2-methy 98.6 1.2E-07 4.1E-12 97.5 10.4 104 528-680 32-135 (259)
322 1yb2_A Hypothetical protein TA 98.6 8.1E-08 2.8E-12 100.7 9.3 119 528-697 109-230 (275)
323 3k0b_A Predicted N6-adenine-sp 98.6 2.5E-07 8.6E-12 102.3 13.6 115 52-169 188-353 (393)
324 4df3_A Fibrillarin-like rRNA/T 98.6 5.4E-07 1.9E-11 92.3 14.6 144 528-715 76-230 (233)
325 2b25_A Hypothetical protein; s 98.6 1.7E-07 5.7E-12 101.2 11.4 120 528-695 104-235 (336)
326 4dcm_A Ribosomal RNA large sub 98.6 2.4E-07 8.1E-12 101.9 12.8 142 530-716 223-367 (375)
327 3gru_A Dimethyladenosine trans 98.6 2.2E-07 7.5E-12 98.7 11.7 86 51-141 36-124 (295)
328 3hem_A Cyclopropane-fatty-acyl 98.6 2.2E-07 7.5E-12 98.4 11.8 112 528-682 71-188 (302)
329 1zg3_A Isoflavanone 4'-O-methy 98.6 8.8E-08 3E-12 104.3 8.9 95 68-168 193-295 (358)
330 2ift_A Putative methylase HI07 98.6 7.5E-08 2.6E-12 96.2 7.6 109 530-681 54-167 (201)
331 2qfm_A Spermine synthase; sper 98.6 4.7E-07 1.6E-11 98.2 14.4 101 68-168 188-316 (364)
332 3ldg_A Putative uncharacterize 98.6 3.8E-07 1.3E-11 100.4 14.0 115 52-169 181-346 (384)
333 3dh0_A SAM dependent methyltra 98.6 2.1E-07 7.1E-12 93.3 10.7 147 528-718 36-194 (219)
334 2qm3_A Predicted methyltransfe 98.6 3.4E-07 1.2E-11 100.5 13.1 105 529-679 172-280 (373)
335 3jwh_A HEN1; methyltransferase 98.6 4.3E-07 1.5E-11 91.2 12.7 106 528-677 28-141 (217)
336 1o54_A SAM-dependent O-methylt 98.5 2.2E-07 7.7E-12 97.3 10.9 114 528-694 111-228 (277)
337 2fpo_A Methylase YHHF; structu 98.5 1.8E-07 6.1E-12 93.5 9.7 106 530-679 55-162 (202)
338 3cvo_A Methyltransferase-like 98.5 3.6E-07 1.2E-11 91.5 11.7 121 529-681 30-159 (202)
339 1ixk_A Methyltransferase; open 98.5 3.7E-07 1.3E-11 97.9 12.5 132 528-697 117-266 (315)
340 3kkz_A Uncharacterized protein 98.5 2.5E-07 8.5E-12 96.1 10.7 104 528-678 45-151 (267)
341 4htf_A S-adenosylmethionine-de 98.5 1.7E-07 5.7E-12 98.3 9.5 110 529-682 68-178 (285)
342 3mgg_A Methyltransferase; NYSG 98.5 1.3E-07 4.4E-12 98.6 8.5 107 528-677 36-142 (276)
343 1yub_A Ermam, rRNA methyltrans 98.5 7.7E-09 2.6E-13 106.8 -0.8 110 51-166 15-145 (245)
344 1qam_A ERMC' methyltransferase 98.5 5.7E-07 2E-11 92.8 13.2 73 52-129 17-89 (244)
345 3g5l_A Putative S-adenosylmeth 98.5 3.1E-07 1.1E-11 94.4 11.2 104 528-678 43-146 (253)
346 2yvl_A TRMI protein, hypotheti 98.5 2.3E-07 7.8E-12 94.9 10.1 117 529-699 91-210 (248)
347 3f4k_A Putative methyltransfer 98.5 3.1E-07 1E-11 94.4 11.0 103 528-677 45-150 (257)
348 2ar0_A M.ecoki, type I restric 98.5 4.4E-07 1.5E-11 104.4 13.1 161 46-213 151-364 (541)
349 3tqs_A Ribosomal RNA small sub 98.5 6E-07 2.1E-11 93.4 13.0 74 51-129 15-88 (255)
350 3grz_A L11 mtase, ribosomal pr 98.5 3.6E-07 1.2E-11 90.9 10.8 120 528-698 59-179 (205)
351 3dli_A Methyltransferase; PSI- 98.5 4.2E-07 1.4E-11 92.8 11.6 105 528-681 40-144 (240)
352 3m4x_A NOL1/NOP2/SUN family pr 98.5 3.4E-07 1.2E-11 102.8 11.8 133 528-697 104-254 (456)
353 2nxc_A L11 mtase, ribosomal pr 98.5 5.5E-07 1.9E-11 93.4 12.6 121 528-700 119-240 (254)
354 1nt2_A Fibrillarin-like PRE-rR 98.5 7.9E-07 2.7E-11 89.6 13.4 140 528-715 56-208 (210)
355 2xyq_A Putative 2'-O-methyl tr 98.5 2E-07 6.7E-12 98.8 9.2 90 66-169 61-174 (290)
356 3jwg_A HEN1, methyltransferase 98.5 3.1E-07 1.1E-11 92.2 10.3 106 528-677 28-141 (219)
357 3ocj_A Putative exported prote 98.5 2.8E-07 9.7E-12 97.9 10.5 112 528-680 117-230 (305)
358 3g07_A 7SK snRNA methylphospha 98.5 3E-07 1E-11 97.3 10.5 45 529-573 46-90 (292)
359 3cgg_A SAM-dependent methyltra 98.5 1.8E-06 6.1E-11 84.1 15.4 123 528-697 45-168 (195)
360 2yxd_A Probable cobalt-precorr 98.5 2E-06 6.9E-11 82.9 15.6 115 528-696 34-148 (183)
361 2gb4_A Thiopurine S-methyltran 98.5 2.3E-07 7.8E-12 96.4 9.4 105 529-675 68-189 (252)
362 3a27_A TYW2, uncharacterized p 98.5 2E-07 6.9E-12 97.8 9.0 121 529-697 119-242 (272)
363 1pjz_A Thiopurine S-methyltran 98.5 1.9E-07 6.6E-12 93.4 8.3 103 528-672 21-135 (203)
364 2p7i_A Hypothetical protein; p 98.5 2.7E-07 9.4E-12 93.7 9.4 103 529-681 42-145 (250)
365 3h2b_A SAM-dependent methyltra 98.5 1.2E-06 4.1E-11 86.7 13.9 139 530-716 42-194 (203)
366 3ofk_A Nodulation protein S; N 98.5 9.4E-07 3.2E-11 88.4 13.0 128 528-704 50-188 (216)
367 3gwz_A MMCR; methyltransferase 98.5 3.3E-06 1.1E-10 92.3 18.4 100 528-676 201-306 (369)
368 3fut_A Dimethyladenosine trans 98.5 9.5E-07 3.2E-11 92.7 13.4 82 51-139 33-118 (271)
369 1nkv_A Hypothetical protein YJ 98.5 3.8E-07 1.3E-11 93.7 10.3 103 528-677 35-140 (256)
370 3lbf_A Protein-L-isoaspartate 98.5 3.8E-07 1.3E-11 91.0 9.9 101 528-679 76-176 (210)
371 2frn_A Hypothetical protein PH 98.5 2.8E-07 9.5E-12 97.0 9.3 117 529-696 125-248 (278)
372 1i9g_A Hypothetical protein RV 98.5 6.8E-07 2.3E-11 93.3 12.2 115 528-694 98-218 (280)
373 1ej0_A FTSJ; methyltransferase 98.5 6.7E-07 2.3E-11 85.4 11.2 129 528-703 21-160 (180)
374 3i9f_A Putative type 11 methyl 98.5 7.2E-07 2.5E-11 85.7 11.4 136 528-718 16-161 (170)
375 3kr9_A SAM-dependent methyltra 98.5 3E-07 1E-11 93.7 9.1 139 529-718 15-159 (225)
376 1vl5_A Unknown conserved prote 98.5 4.6E-07 1.6E-11 93.5 10.6 104 528-676 36-139 (260)
377 3ou2_A SAM-dependent methyltra 98.5 4.5E-07 1.5E-11 90.5 10.1 104 528-682 45-151 (218)
378 3hnr_A Probable methyltransfer 98.5 3E-06 1E-10 84.8 15.9 99 529-678 45-146 (220)
379 4hg2_A Methyltransferase type 98.4 4.4E-07 1.5E-11 94.5 9.9 100 528-679 38-137 (257)
380 3ujc_A Phosphoethanolamine N-m 98.4 3.1E-07 1.1E-11 94.5 8.6 108 528-679 54-161 (266)
381 2qe6_A Uncharacterized protein 98.4 4.1E-06 1.4E-10 87.9 17.4 119 529-681 77-200 (274)
382 1ve3_A Hypothetical protein PH 98.4 2.5E-07 8.4E-12 93.1 7.7 107 529-679 38-144 (227)
383 2pxx_A Uncharacterized protein 98.4 3.2E-07 1.1E-11 91.2 8.3 113 528-680 41-162 (215)
384 2ex4_A Adrenal gland protein A 98.4 3.2E-07 1.1E-11 93.8 8.4 106 529-676 79-184 (241)
385 3bus_A REBM, methyltransferase 98.4 1.9E-06 6.5E-11 89.4 14.3 106 528-679 60-168 (273)
386 3e8s_A Putative SAM dependent 98.4 1.4E-06 4.9E-11 87.1 12.7 104 528-679 51-154 (227)
387 2b78_A Hypothetical protein SM 98.4 9.3E-07 3.2E-11 97.5 12.3 136 530-698 213-351 (385)
388 2dul_A N(2),N(2)-dimethylguano 98.4 2.7E-07 9.2E-12 101.5 7.7 97 68-166 47-164 (378)
389 3ftd_A Dimethyladenosine trans 98.4 8.1E-07 2.8E-11 92.1 10.9 72 52-129 18-89 (249)
390 3l8d_A Methyltransferase; stru 98.4 7.6E-07 2.6E-11 90.5 10.5 105 528-680 52-156 (242)
391 2pbf_A Protein-L-isoaspartate 98.4 3E-07 1E-11 93.0 7.3 106 529-679 80-195 (227)
392 3lec_A NADB-rossmann superfami 98.4 5.4E-07 1.8E-11 92.1 9.1 139 529-718 21-165 (230)
393 2frx_A Hypothetical protein YE 98.4 1.2E-06 4E-11 99.4 12.8 132 529-697 117-266 (479)
394 1xxl_A YCGJ protein; structura 98.4 9.7E-07 3.3E-11 90.2 11.1 101 528-676 20-123 (239)
395 3g5t_A Trans-aconitate 3-methy 98.4 4E-07 1.4E-11 96.3 8.3 110 528-675 35-147 (299)
396 2dul_A N(2),N(2)-dimethylguano 98.4 6.9E-07 2.3E-11 98.3 10.4 102 530-677 48-164 (378)
397 3bxo_A N,N-dimethyltransferase 98.4 1.1E-06 3.7E-11 89.0 11.2 106 528-680 39-144 (239)
398 1nv8_A HEMK protein; class I a 98.4 1.7E-06 5.7E-11 91.4 12.7 142 530-716 124-281 (284)
399 1wxx_A TT1595, hypothetical pr 98.4 2.3E-06 7.7E-11 94.2 14.2 114 530-680 210-328 (382)
400 3ccf_A Cyclopropane-fatty-acyl 98.4 8.7E-07 3E-11 92.6 10.3 103 528-681 56-158 (279)
401 2fk8_A Methoxy mycolic acid sy 98.4 1E-06 3.6E-11 93.8 11.1 110 528-682 89-199 (318)
402 3gu3_A Methyltransferase; alph 98.4 3.7E-07 1.3E-11 96.0 7.3 107 528-679 21-128 (284)
403 3i53_A O-methyltransferase; CO 98.4 2.1E-06 7.1E-11 92.3 13.3 101 528-677 168-274 (332)
404 4hc4_A Protein arginine N-meth 98.4 6.8E-07 2.3E-11 98.0 9.6 101 529-674 83-186 (376)
405 3uzu_A Ribosomal RNA small sub 98.4 1.9E-06 6.4E-11 90.9 12.6 73 51-129 28-103 (279)
406 2yqz_A Hypothetical protein TT 98.4 8.8E-07 3E-11 91.1 9.9 104 528-677 38-141 (263)
407 3pfg_A N-methyltransferase; N, 98.4 1.7E-06 5.9E-11 89.4 11.9 99 528-677 49-151 (263)
408 3id6_C Fibrillarin-like rRNA/T 98.4 2.3E-06 7.9E-11 87.7 12.5 141 528-716 75-230 (232)
409 3bkw_A MLL3908 protein, S-aden 98.4 1.5E-06 5.1E-11 88.2 11.1 104 528-678 42-145 (243)
410 1kpg_A CFA synthase;, cyclopro 98.4 1.8E-06 6.3E-11 90.3 12.0 108 528-680 63-171 (287)
411 3e23_A Uncharacterized protein 98.3 2.1E-06 7.3E-11 85.5 11.7 121 529-702 43-180 (211)
412 2yxl_A PH0851 protein, 450AA l 98.3 1.3E-06 4.4E-11 98.4 11.1 134 529-698 259-410 (450)
413 3q7e_A Protein arginine N-meth 98.3 1.1E-06 3.9E-11 95.4 10.3 104 529-676 66-172 (349)
414 3lcc_A Putative methyl chlorid 98.3 7E-07 2.4E-11 90.7 8.0 106 530-679 67-173 (235)
415 3ggd_A SAM-dependent methyltra 98.3 2.3E-06 7.9E-11 87.3 12.0 112 528-680 55-166 (245)
416 2yxe_A Protein-L-isoaspartate 98.3 1.1E-06 3.6E-11 88.0 8.9 101 528-680 76-180 (215)
417 1i1n_A Protein-L-isoaspartate 98.3 9.8E-07 3.3E-11 89.1 8.7 104 528-680 76-185 (226)
418 3axs_A Probable N(2),N(2)-dime 98.3 1.2E-06 4E-11 96.6 9.9 103 529-677 52-158 (392)
419 1g6q_1 HnRNP arginine N-methyl 98.3 2.2E-06 7.6E-11 92.3 11.9 102 529-674 38-142 (328)
420 2k4m_A TR8_protein, UPF0146 pr 98.3 1.3E-06 4.4E-11 82.2 8.6 85 68-170 35-125 (153)
421 3g2m_A PCZA361.24; SAM-depende 98.3 3.7E-07 1.3E-11 96.5 5.7 106 529-681 82-194 (299)
422 2ipx_A RRNA 2'-O-methyltransfe 98.3 6.5E-07 2.2E-11 91.1 7.3 107 529-679 77-184 (233)
423 2fyt_A Protein arginine N-meth 98.3 1.9E-06 6.4E-11 93.4 11.3 103 528-674 63-168 (340)
424 2b9e_A NOL1/NOP2/SUN domain fa 98.3 3.5E-06 1.2E-10 90.1 13.2 109 56-168 93-236 (309)
425 4fsd_A Arsenic methyltransfera 98.3 8.9E-07 3E-11 97.4 8.8 113 528-677 82-203 (383)
426 2xvm_A Tellurite resistance pr 98.3 1E-06 3.5E-11 86.4 8.4 104 529-676 32-135 (199)
427 2gs9_A Hypothetical protein TT 98.3 9.7E-07 3.3E-11 88.0 8.3 103 529-683 36-138 (211)
428 1r18_A Protein-L-isoaspartate( 98.3 4.5E-07 1.5E-11 92.0 5.9 102 529-679 84-196 (227)
429 4dmg_A Putative uncharacterize 98.3 3.3E-06 1.1E-10 93.2 13.3 106 530-679 215-328 (393)
430 2o57_A Putative sarcosine dime 98.3 1.1E-06 3.9E-11 92.4 9.1 105 528-678 81-188 (297)
431 2as0_A Hypothetical protein PH 98.3 2.3E-06 8E-11 94.5 12.0 116 529-680 217-338 (396)
432 3dou_A Ribosomal RNA large sub 98.3 4E-06 1.4E-10 83.1 12.5 132 529-704 25-164 (191)
433 3c0k_A UPF0064 protein YCCW; P 98.3 3.6E-06 1.2E-10 93.0 13.4 119 530-680 221-342 (396)
434 1xtp_A LMAJ004091AAA; SGPP, st 98.3 2.2E-06 7.5E-11 87.7 10.9 106 528-677 92-197 (254)
435 3axs_A Probable N(2),N(2)-dime 98.3 6.4E-07 2.2E-11 98.8 7.2 97 68-166 52-158 (392)
436 2y1w_A Histone-arginine methyl 98.3 1.3E-06 4.3E-11 95.0 9.5 104 528-677 49-155 (348)
437 3gnl_A Uncharacterized protein 98.3 1.2E-06 3.9E-11 90.4 8.7 139 529-718 21-165 (244)
438 3thr_A Glycine N-methyltransfe 98.3 1.6E-06 5.4E-11 91.1 9.9 115 528-679 56-177 (293)
439 3vc1_A Geranyl diphosphate 2-C 98.3 1.7E-06 5.6E-11 92.2 10.0 105 528-679 116-223 (312)
440 1m6y_A S-adenosyl-methyltransf 98.3 1.4E-06 4.7E-11 92.9 9.3 86 51-139 12-106 (301)
441 3sm3_A SAM-dependent methyltra 98.3 2.1E-06 7.3E-11 86.4 10.3 111 528-680 29-144 (235)
442 1jg1_A PIMT;, protein-L-isoasp 98.3 9.6E-07 3.3E-11 90.0 7.7 103 528-680 90-192 (235)
443 3dmg_A Probable ribosomal RNA 98.3 2.6E-06 8.9E-11 93.7 11.6 142 529-718 233-374 (381)
444 3q87_B N6 adenine specific DNA 98.3 4.3E-06 1.5E-10 81.0 11.9 134 529-715 23-160 (170)
445 3r0q_C Probable protein argini 98.3 2E-06 6.9E-11 94.4 10.5 103 528-675 62-167 (376)
446 2pjd_A Ribosomal RNA small sub 98.3 2.1E-06 7E-11 93.1 10.5 140 530-716 197-336 (343)
447 1sqg_A SUN protein, FMU protei 98.3 2.9E-06 9.9E-11 94.8 11.9 133 528-697 245-394 (429)
448 1dl5_A Protein-L-isoaspartate 98.3 1.5E-06 5.2E-11 93.0 9.2 103 528-679 74-177 (317)
449 2plw_A Ribosomal RNA methyltra 98.3 4.7E-06 1.6E-10 82.2 12.0 152 529-704 22-179 (201)
450 2r3s_A Uncharacterized protein 98.3 7.1E-06 2.4E-10 87.8 14.3 101 528-676 164-270 (335)
451 1x19_A CRTF-related protein; m 98.3 9E-06 3.1E-10 88.3 15.2 100 528-676 189-294 (359)
452 3mcz_A O-methyltransferase; ad 98.3 1.9E-06 6.5E-11 93.2 9.6 103 530-676 180-286 (352)
453 4a6d_A Hydroxyindole O-methylt 98.3 4.6E-06 1.6E-10 90.7 12.6 125 505-676 155-282 (353)
454 3lkd_A Type I restriction-modi 98.2 1.6E-05 5.4E-10 91.3 17.5 164 45-212 198-409 (542)
455 3m33_A Uncharacterized protein 98.2 6.7E-07 2.3E-11 90.6 5.4 91 529-674 48-139 (226)
456 2nyu_A Putative ribosomal RNA 98.2 5.9E-06 2E-10 81.1 12.0 128 529-703 22-169 (196)
457 3khk_A Type I restriction-modi 98.2 9E-06 3.1E-10 93.5 15.3 162 45-214 226-449 (544)
458 2aot_A HMT, histamine N-methyl 98.2 3.7E-06 1.3E-10 88.6 11.2 116 529-681 52-176 (292)
459 1qzz_A RDMB, aclacinomycin-10- 98.2 8.8E-06 3E-10 88.6 14.5 102 528-678 181-288 (374)
460 3m70_A Tellurite resistance pr 98.2 2.2E-06 7.6E-11 89.8 9.3 104 529-677 120-223 (286)
461 2kw5_A SLR1183 protein; struct 98.2 1.9E-06 6.6E-11 85.1 8.1 103 532-680 32-134 (202)
462 1vbf_A 231AA long hypothetical 98.2 3E-06 1E-10 85.7 9.7 100 528-680 69-168 (231)
463 1o9g_A RRNA methyltransferase; 98.2 4.9E-07 1.7E-11 93.1 3.8 46 529-574 51-98 (250)
464 3o4f_A Spermidine synthase; am 98.2 6E-06 2.1E-10 87.2 12.0 99 68-166 83-198 (294)
465 3mq2_A 16S rRNA methyltransfer 98.2 1.4E-06 4.7E-11 87.5 6.8 110 528-677 26-140 (218)
466 2ip2_A Probable phenazine-spec 98.2 3.3E-06 1.1E-10 90.7 10.1 97 531-676 169-271 (334)
467 3k6r_A Putative transferase PH 98.2 6.9E-07 2.4E-11 94.0 4.6 98 528-676 124-224 (278)
468 3d2l_A SAM-dependent methyltra 98.2 1.5E-06 5.2E-11 88.2 7.1 106 530-679 34-139 (243)
469 3cc8_A Putative methyltransfer 98.2 1.7E-06 5.9E-11 86.7 7.3 103 528-680 31-133 (230)
470 3ll7_A Putative methyltransfer 98.2 1.6E-06 5.5E-11 95.9 7.6 101 68-169 93-211 (410)
471 1wzn_A SAM-dependent methyltra 98.2 1.4E-06 4.9E-11 89.2 6.7 108 528-679 40-147 (252)
472 3dp7_A SAM-dependent methyltra 98.2 2.1E-06 7.2E-11 93.7 8.3 105 528-676 178-286 (363)
473 2yx1_A Hypothetical protein MJ 98.2 2.3E-06 8E-11 92.5 8.5 112 529-696 195-307 (336)
474 1ri5_A MRNA capping enzyme; me 98.2 2.8E-06 9.4E-11 89.0 8.6 112 528-679 63-176 (298)
475 2p8j_A S-adenosylmethionine-de 98.2 1.3E-06 4.4E-11 86.7 5.4 109 528-680 22-131 (209)
476 1p91_A Ribosomal RNA large sub 98.2 4E-06 1.4E-10 86.9 9.0 98 528-680 84-181 (269)
477 3gdh_A Trimethylguanosine synt 98.1 7.3E-07 2.5E-11 91.0 3.2 103 529-677 78-181 (241)
478 2r6z_A UPF0341 protein in RSP 98.1 1.3E-06 4.6E-11 90.9 5.3 73 67-140 82-170 (258)
479 1tw3_A COMT, carminomycin 4-O- 98.1 5.6E-06 1.9E-10 89.8 10.4 101 528-677 182-288 (360)
480 1u2z_A Histone-lysine N-methyl 98.1 5.5E-06 1.9E-10 92.4 10.4 105 528-676 241-358 (433)
481 1y8c_A S-adenosylmethionine-de 98.1 2.6E-06 8.8E-11 86.4 7.1 108 529-679 37-144 (246)
482 1wy7_A Hypothetical protein PH 98.1 6E-05 2E-09 74.7 16.6 116 529-694 49-164 (207)
483 3tma_A Methyltransferase; thum 98.1 8.7E-06 3E-10 88.4 11.3 109 529-677 203-317 (354)
484 3uwp_A Histone-lysine N-methyl 98.1 8.5E-06 2.9E-10 89.6 11.0 106 528-676 172-287 (438)
485 1qyr_A KSGA, high level kasuga 98.1 6E-06 2.1E-10 85.7 9.1 71 52-129 8-80 (252)
486 3vyw_A MNMC2; tRNA wobble urid 98.1 7E-05 2.4E-09 79.3 17.3 148 528-719 95-262 (308)
487 2vdw_A Vaccinia virus capping 98.1 3.7E-06 1.3E-10 89.6 7.6 115 529-679 48-171 (302)
488 2wk1_A NOVP; transferase, O-me 98.1 7.8E-06 2.7E-10 86.1 9.9 125 528-697 105-263 (282)
489 4e2x_A TCAB9; kijanose, tetron 98.1 3.4E-05 1.2E-09 85.4 15.6 104 528-678 106-209 (416)
490 3ege_A Putative methyltransfer 98.1 2.8E-06 9.5E-11 88.0 6.3 98 528-677 33-130 (261)
491 3fzg_A 16S rRNA methylase; met 98.1 2.2E-06 7.4E-11 84.8 5.1 99 528-674 48-149 (200)
492 3sso_A Methyltransferase; macr 98.1 3.4E-06 1.2E-10 92.5 6.9 100 528-676 215-323 (419)
493 3bkx_A SAM-dependent methyltra 98.1 6.4E-06 2.2E-10 85.5 8.5 113 528-680 42-162 (275)
494 1ne2_A Hypothetical protein TA 98.1 4.9E-05 1.7E-09 75.0 14.6 95 529-675 51-145 (200)
495 2avn_A Ubiquinone/menaquinone 98.1 1.3E-05 4.3E-10 82.9 10.6 102 529-680 54-155 (260)
496 3bgv_A MRNA CAP guanine-N7 met 98.1 3E-06 1E-10 90.2 5.9 117 529-680 34-158 (313)
497 3b3j_A Histone-arginine methyl 98.1 4E-06 1.4E-10 95.1 7.2 100 529-677 158-263 (480)
498 3p2e_A 16S rRNA methylase; met 98.1 3.5E-06 1.2E-10 85.8 6.0 110 529-675 24-137 (225)
499 2h00_A Methyltransferase 10 do 98.0 2.5E-05 8.5E-10 80.3 12.1 60 529-590 65-127 (254)
500 3bzb_A Uncharacterized protein 98.0 3.2E-05 1.1E-09 81.2 12.7 108 529-679 79-207 (281)
No 1
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.93 E-value=5.1e-25 Score=236.15 Aligned_cols=181 Identities=20% Similarity=0.289 Sum_probs=151.6
Q ss_pred cCCccchHHHHHHHHHHhhh--hhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC
Q 004354 498 YHGYLASSYHMGIISGFTLI--SSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF 575 (759)
Q Consensus 498 d~~~L~~~Y~~~m~~~l~l~--~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl 575 (759)
|+..+.++||+.|+..+.++ .+ ..+++.+||+||+|+|.++++|.+.+|..+|++|||||.|+++|+++|++
T Consensus 62 dP~~le~~Y~e~m~~~~~~l~~~~------p~p~~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~ 135 (317)
T 3gjy_A 62 QPQALEFEYMRWIATGARAFIDAH------QDASKLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI 135 (317)
T ss_dssp CTTCCCSHHHHHHHHHHHHHHHHH------SCGGGCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC
T ss_pred CCcchhhHHHHHHHHHHHhhcccC------CCCCCCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc
Confidence 36678999999999876652 12 01223499999999999999999988999999999999999999999998
Q ss_pred CCCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC
Q 004354 576 TQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV 655 (759)
Q Consensus 576 ~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~ 655 (759)
..++|++++++||++|+.... ..+||+||+|++.... ++.+++
T Consensus 136 ~~~~rv~v~~~Da~~~l~~~~-------------------------------~~~fDvIi~D~~~~~~------~~~~L~ 178 (317)
T 3gjy_A 136 PRAPRVKIRVDDARMVAESFT-------------------------------PASRDVIIRDVFAGAI------TPQNFT 178 (317)
T ss_dssp CCTTTEEEEESCHHHHHHTCC-------------------------------TTCEEEEEECCSTTSC------CCGGGS
T ss_pred cCCCceEEEECcHHHHHhhcc-------------------------------CCCCCEEEECCCCccc------cchhhh
Confidence 778999999999999997643 3679999999877642 478899
Q ss_pred hHHHHHHHHHccCcCcEEEEEecCCC-hhHHHHHHHHHHHhcCceEEEeec------CCccEEEEEecCCCCC
Q 004354 656 EGSFLLTVKDALSEQGLFIVNLVSRS-QATKDMVISRMKMVFNHLFCLQLE------EDVNLVLFGLSSESCI 721 (759)
Q Consensus 656 ~~~fl~~~~~~L~~~Gilv~N~~~~~-~~~~~~v~~~l~~vF~~v~~~~~~------~~~N~Vl~a~~~~~~~ 721 (759)
+.+||+.++++|+|||+|++|+.+.. ......++.+|+++|+++..+... +..|.|++|++.+...
T Consensus 179 t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl~As~~plp~ 251 (317)
T 3gjy_A 179 TVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIILMGSDTEFFS 251 (317)
T ss_dssp BHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEEEEESSCCCC
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEEEEECCCCCc
Confidence 99999999999999999999997543 345678899999999999888632 5689999999887543
No 2
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.90 E-value=3.1e-23 Score=219.27 Aligned_cols=168 Identities=20% Similarity=0.347 Sum_probs=137.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----CCCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQD 578 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----gl~~~ 578 (759)
+.||.+|+ +++|..+ ++|++|||||+|+|++++.+.++.+..+|++|||||.|+++|++|| |..+|
T Consensus 67 ~~YhE~l~-h~~l~~~--------p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~d 137 (294)
T 3o4f_A 67 FIYHEMMT-HVPLLAH--------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDD 137 (294)
T ss_dssp HHHHHHHH-HHHHHHS--------SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGC
T ss_pred HHHHHHHH-HHHHhhC--------CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCC
Confidence 66887554 5566555 7899999999999999999999988789999999999999999998 33468
Q ss_pred CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHH
Q 004354 579 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 658 (759)
Q Consensus 579 ~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~ 658 (759)
+|++++++||++||++.. .+||+||+|++++.. |+..|++.+
T Consensus 138 pRv~v~~~Dg~~~l~~~~--------------------------------~~yDvIi~D~~dp~~------~~~~L~t~e 179 (294)
T 3o4f_A 138 PRFKLVIDDGVNFVNQTS--------------------------------QTFDVIISDCTDPIG------PGESLFTSA 179 (294)
T ss_dssp TTEEEEESCTTTTTSCSS--------------------------------CCEEEEEESCCCCCC------TTCCSSCCH
T ss_pred CcEEEEechHHHHHhhcc--------------------------------ccCCEEEEeCCCcCC------CchhhcCHH
Confidence 999999999999997643 689999999876532 578899999
Q ss_pred HHHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ec---CCccEEEEEecCC
Q 004354 659 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSSE 718 (759)
Q Consensus 659 fl~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~Vl~a~~~~ 718 (759)
|++.|+++|+|||+++++..+. +......++++++++|+.+..+. ++ .+.....+|++..
T Consensus 180 Fy~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as~~~ 246 (294)
T 3o4f_A 180 FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEESCT
T ss_pred HHHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEECCC
Confidence 9999999999999999987553 34455677899999999875554 33 3455677788765
No 3
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.86 E-value=5.9e-21 Score=207.55 Aligned_cols=174 Identities=12% Similarity=0.110 Sum_probs=130.0
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC--------
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-------- 575 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-------- 575 (759)
..||++|+.. +++. ..+++|||||+|+|++++.+.++.+ .+|++|||||+|+++|++||..
T Consensus 190 ~~Y~e~l~h~-~l~~---------~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~ 258 (381)
T 3c6k_A 190 LAYTRAIMGS-GKED---------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 258 (381)
T ss_dssp HHHHHHHTTT-TCCC---------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred HHHHHHHHHH-Hhhc---------CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhcc
Confidence 3588877654 3333 3468999999999999999988754 7999999999999999999843
Q ss_pred CCCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC
Q 004354 576 TQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV 655 (759)
Q Consensus 576 ~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~ 655 (759)
+.++|++++++||++||++.+. ...+||+||+|+++...+.+...|+..++
T Consensus 259 pr~~rv~vii~Da~~fl~~~~~-----------------------------~~~~yDvIIvDl~D~~~s~~p~g~a~~Lf 309 (381)
T 3c6k_A 259 LKGDCYQVLIEDCIPVLKRYAK-----------------------------EGREFDYVINDLTAVPISTSPEEDSTWEF 309 (381)
T ss_dssp SEETTEEEEESCHHHHHHHHHH-----------------------------HTCCEEEEEEECCSSCCCCC----CHHHH
T ss_pred ccccceeeehHHHHHHHHhhhh-----------------------------ccCceeEEEECCCCCcccCcccCcchHHH
Confidence 2357899999999999987641 13679999999987654444445667889
Q ss_pred hHHHHHHHHHccCcCcEEEEEecCC-ChhHHHHHHHHHHHhcCceEEE----eecC--CccEEEEEecC
Q 004354 656 EGSFLLTVKDALSEQGLFIVNLVSR-SQATKDMVISRMKMVFNHLFCL----QLEE--DVNLVLFGLSS 717 (759)
Q Consensus 656 ~~~fl~~~~~~L~~~Gilv~N~~~~-~~~~~~~v~~~l~~vF~~v~~~----~~~~--~~N~Vl~a~~~ 717 (759)
+.+||+.|+++|+|+|+++.+.-+. .......+.++|+++|+.+... .++. +.....+|++.
T Consensus 310 t~eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 310 LRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 9999999999999999999875433 2344567789999999976322 2332 34556677664
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.85 E-value=4.3e-20 Score=195.34 Aligned_cols=167 Identities=17% Similarity=0.290 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----CCCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQD 578 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----gl~~~ 578 (759)
+.||..|. ++++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.|+++|+++| ++ .+
T Consensus 59 ~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~-~~ 128 (275)
T 1iy9_A 59 FVYHEMVA-HVPLFTH--------PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL-DD 128 (275)
T ss_dssp HHHHHHHH-HHHHHHS--------SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-TS
T ss_pred hHHHHHHH-HHHHhhC--------CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-CC
Confidence 67887544 5554433 4678999999999999999998877789999999999999999998 44 57
Q ss_pred CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHH
Q 004354 579 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 658 (759)
Q Consensus 579 ~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~ 658 (759)
+|++++++||.+++.... .+||+||+|+.... .|+..+++.+
T Consensus 129 ~rv~v~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~------~~~~~l~~~~ 170 (275)
T 1iy9_A 129 PRVDVQVDDGFMHIAKSE--------------------------------NQYDVIMVDSTEPV------GPAVNLFTKG 170 (275)
T ss_dssp TTEEEEESCSHHHHHTCC--------------------------------SCEEEEEESCSSCC------SCCCCCSTTH
T ss_pred CceEEEECcHHHHHhhCC--------------------------------CCeeEEEECCCCCC------CcchhhhHHH
Confidence 899999999999987532 57999999886532 2578889999
Q ss_pred HHHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ecC---CccEEEEEecCC
Q 004354 659 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE---DVNLVLFGLSSE 718 (759)
Q Consensus 659 fl~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~---~~N~Vl~a~~~~ 718 (759)
|++.++++|+|||+|++|..+. +......++++++++|+++..+. ++. +.+.+++|++..
T Consensus 171 ~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~~ 237 (275)
T 1iy9_A 171 FYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKY 237 (275)
T ss_dssp HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESSC
T ss_pred HHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCCC
Confidence 9999999999999999997553 45667788999999999866554 332 346677888753
No 5
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.85 E-value=1.3e-20 Score=189.42 Aligned_cols=180 Identities=27% Similarity=0.542 Sum_probs=149.8
Q ss_pred cCCCCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHH
Q 004354 23 GDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKV 102 (759)
Q Consensus 23 ~~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~ 102 (759)
++|.+.+||+++|........++|+..+..+...+..++ .++.+|||+|||+|.++..+++.|+.+|+|+|+|+.
T Consensus 2 ~~~~~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~ 76 (215)
T 2pxx_A 2 SGYREVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPEL-----RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSV 76 (215)
T ss_dssp GGGGCHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGC-----CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHH
T ss_pred CcccchhHHHHHhccCCCCCCcccccCHHHHHHHHHHhc-----CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHH
Confidence 368899999999987632346889999888888887776 357899999999999999999998767999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCCh-----------------hHHHHHHHHHHHhcccCcEE
Q 004354 103 VISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGH-----------------KLGNQYLSEVKRLLKSGGKF 162 (759)
Q Consensus 103 ~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~-----------------~~~~~~l~ei~rvLkpGG~l 162 (759)
+++.++++... .++++++++|+.+++ ++||+|++....+ .....+++++.++|+|||++
T Consensus 77 ~~~~a~~~~~~-~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 155 (215)
T 2pxx_A 77 VVAAMQACYAH-VPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRF 155 (215)
T ss_dssp HHHHHHHHTTT-CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHhccc-CCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEE
Confidence 99999888643 468999999998876 7899999854321 23689999999999999999
Q ss_pred EEEEcCchhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCCCc
Q 004354 163 VCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENSS 214 (759)
Q Consensus 163 iiit~~~~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~~~ 214 (759)
++.++..++....++.....+|.+....+.. ..++|+|++++.+.+
T Consensus 156 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 201 (215)
T 2pxx_A 156 ISMTSAAPHFRTRHYAQAYYGWSLRHATYGS------GFHFHLYLMHKGGKL 201 (215)
T ss_dssp EEEESCCHHHHHHHHCCGGGCEEEEEEEESG------GGCEEEEEEEETCCC
T ss_pred EEEeCCCcHHHHHHHhccccCcEEEEEEecC------cceEEEEEEEeCCCC
Confidence 9999999988888887776689888877743 478899999887654
No 6
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.83 E-value=3.6e-19 Score=191.82 Aligned_cols=185 Identities=15% Similarity=0.176 Sum_probs=140.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-----CCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQD 578 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-----~~~ 578 (759)
+.||+.|. +++++.+ +.+.+||+||+|+|.++..+.++.|..+|++||+||.++++|+++|.. ..+
T Consensus 61 ~~Y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~ 131 (314)
T 1uir_A 61 YIYHETLV-HPAMLTH--------PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDD 131 (314)
T ss_dssp HHHHHHHH-HHHHHHS--------SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGC
T ss_pred hHHHHHHH-HHHHhcC--------CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccC
Confidence 56887655 3444433 567899999999999999999887778999999999999999999842 136
Q ss_pred CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHH
Q 004354 579 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 658 (759)
Q Consensus 579 ~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~ 658 (759)
++++++++|+.+++.... .+||+||+|..... ++.+|+..+++.+
T Consensus 132 ~~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~---~~~~~~~~l~~~~ 176 (314)
T 1uir_A 132 PRAVLVIDDARAYLERTE--------------------------------ERYDVVIIDLTDPV---GEDNPARLLYTVE 176 (314)
T ss_dssp TTEEEEESCHHHHHHHCC--------------------------------CCEEEEEEECCCCB---STTCGGGGGSSHH
T ss_pred CceEEEEchHHHHHHhcC--------------------------------CCccEEEECCCCcc---cccCcchhccHHH
Confidence 899999999999987632 57999999876532 2345678888999
Q ss_pred HHHHHHHccCcCcEEEEEecCC---ChhHHHHHHHHHHHhcCceEEEe--e--cCCccEEEEEecCC--CCCCCCcHHHH
Q 004354 659 FLLTVKDALSEQGLFIVNLVSR---SQATKDMVISRMKMVFNHLFCLQ--L--EEDVNLVLFGLSSE--SCIKDNSFPEA 729 (759)
Q Consensus 659 fl~~~~~~L~~~Gilv~N~~~~---~~~~~~~v~~~l~~vF~~v~~~~--~--~~~~N~Vl~a~~~~--~~~~~~~l~~~ 729 (759)
|++.++++|+|||+|++|..+. +......+.+.++++|+++..+. + ..+.+.+++|++.. .......+.++
T Consensus 177 ~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~~~~p~~~~~~~~~~~ 256 (314)
T 1uir_A 177 FYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDAFDPAAFSEGVIEAR 256 (314)
T ss_dssp HHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEESSSCTTCCCTTHHHHH
T ss_pred HHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEEECCCCcccCCHHHHHHH
Confidence 9999999999999999997543 34566778999999999865443 2 34467788898873 33444445555
Q ss_pred HHH
Q 004354 730 AVQ 732 (759)
Q Consensus 730 a~~ 732 (759)
...
T Consensus 257 ~~~ 259 (314)
T 1uir_A 257 IRE 259 (314)
T ss_dssp HHH
T ss_pred hhc
Confidence 443
No 7
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.80 E-value=2.2e-18 Score=182.68 Aligned_cols=165 Identities=23% Similarity=0.362 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc----CCC---
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF----GFT--- 576 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F----gl~--- 576 (759)
+.||..|. .++++.+ +.+.+||+||+|+|.++..+..+ |..+|++||+||.++++|+++| ++.
T Consensus 59 ~~y~e~l~-~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~ 128 (281)
T 1mjf_A 59 RSYHEPLV-HPAMLAH--------PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAM 128 (281)
T ss_dssp HHHHHHHH-HHHHHHS--------SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHH
T ss_pred hHHHHHHH-HHHHhhC--------CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhcccccccc
Confidence 56887665 4444332 45689999999999999999988 8789999999999999999999 331
Q ss_pred ---CCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCC
Q 004354 577 ---QDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAAD 653 (759)
Q Consensus 577 ---~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~ 653 (759)
.+++++++++||.+++.. . .+||+|++|..... +|+..
T Consensus 129 ~~~~~~~v~~~~~D~~~~l~~-~--------------------------------~~fD~Ii~d~~~~~------~~~~~ 169 (281)
T 1mjf_A 129 LNGKHEKAKLTIGDGFEFIKN-N--------------------------------RGFDVIIADSTDPV------GPAKV 169 (281)
T ss_dssp HTTCCSSEEEEESCHHHHHHH-C--------------------------------CCEEEEEEECCCCC-----------
T ss_pred ccCCCCcEEEEECchHHHhcc-c--------------------------------CCeeEEEECCCCCC------Ccchh
Confidence 368999999999999876 4 57999999876432 25677
Q ss_pred CChHHHHHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ec--CCccEEEEEecC
Q 004354 654 FVEGSFLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE--EDVNLVLFGLSS 717 (759)
Q Consensus 654 f~~~~fl~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~--~~~N~Vl~a~~~ 717 (759)
+++.+|++.++++|+|||+|++|..+. .......+.+.++++|+++..+. ++ .+.+.+++|++.
T Consensus 170 l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~ 239 (281)
T 1mjf_A 170 LFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVKG 239 (281)
T ss_dssp TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEES
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeCC
Confidence 888999999999999999999997543 45666778999999999866554 23 345778889886
No 8
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.79 E-value=5e-18 Score=184.01 Aligned_cols=153 Identities=16% Similarity=0.221 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-----CC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QD 578 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-----~~ 578 (759)
+.||++|+.. ++ .+ +.+.+||+||+|+|.+++.+..+.+ .+|++|||||.|+++|++||... .+
T Consensus 173 ~~YhE~l~~~-~~-~~--------p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~d 241 (364)
T 2qfm_A 173 LAYTRAIMGS-GK-ED--------YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 241 (364)
T ss_dssp HHHHHHHTTT-TC-CC--------CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred hHHHHHHhhh-hh-hC--------CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccc
Confidence 4699876532 22 22 5789999999999999998888865 79999999999999999999521 23
Q ss_pred ---CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCC-CCCCCCCCcCCCCC
Q 004354 579 ---KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADF 654 (759)
Q Consensus 579 ---~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s-~d~~~g~scPp~~f 654 (759)
+|++++++||++|+++... .+.+||+||+|+.. +.. . .|..+
T Consensus 242 p~~~rv~vi~~Da~~~L~~~~~-----------------------------~~~~fDvII~D~~d~P~~---~--~p~~L 287 (364)
T 2qfm_A 242 LKGDCYQVLIEDCIPVLKRYAK-----------------------------EGREFDYVINDLTAVPIS---T--SPEED 287 (364)
T ss_dssp SEETTEEEEESCHHHHHHHHHH-----------------------------HTCCEEEEEEECCSSCCC---C--C----
T ss_pred cCCCcEEEEECcHHHHHHhhhc-----------------------------cCCCceEEEECCCCcccC---c--Cchhh
Confidence 3899999999999987520 03679999999865 321 1 14568
Q ss_pred ChHHHHHHH----HHccCcCcEEEEEecCCChhHHHHHHH-HHHHhcCceEE
Q 004354 655 VEGSFLLTV----KDALSEQGLFIVNLVSRSQATKDMVIS-RMKMVFNHLFC 701 (759)
Q Consensus 655 ~~~~fl~~~----~~~L~~~Gilv~N~~~~~~~~~~~v~~-~l~~vF~~v~~ 701 (759)
++.+|++.+ +++|+|||++++|..+..-.....+++ .++++|+.|..
T Consensus 288 ~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~ 339 (364)
T 2qfm_A 288 STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEF 339 (364)
T ss_dssp CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEE
T ss_pred hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEE
Confidence 999999999 999999999999986654322233444 48899998754
No 9
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.79 E-value=6.7e-18 Score=179.20 Aligned_cols=167 Identities=22% Similarity=0.328 Sum_probs=132.1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC----CCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~----~~~ 579 (759)
+.||. |+.+++++.+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|... .++
T Consensus 62 ~~Y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~ 132 (283)
T 2i7c_A 62 FAYHE-MMTHVPMTVS--------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDK 132 (283)
T ss_dssp HHHHH-HHHHHHHTTS--------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGST
T ss_pred hhHHH-HHHHHHHhcC--------CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCC
Confidence 56776 6666666543 5678999999999999999998877789999999999999999998542 368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
|++++++|+.+++.... .+||+||+|.... . .|+..+++.+|
T Consensus 133 ~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~--~----~~~~~l~~~~~ 174 (283)
T 2i7c_A 133 RVNVFIEDASKFLENVT--------------------------------NTYDVIIVDSSDP--I----GPAETLFNQNF 174 (283)
T ss_dssp TEEEEESCHHHHHHHCC--------------------------------SCEEEEEEECCCT--T----TGGGGGSSHHH
T ss_pred cEEEEECChHHHHHhCC--------------------------------CCceEEEEcCCCC--C----CcchhhhHHHH
Confidence 99999999999987642 5799999987543 2 24677888999
Q ss_pred HHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEE--eecC--Ccc-EEEEEecC
Q 004354 660 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCL--QLEE--DVN-LVLFGLSS 717 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~--~~~~--~~N-~Vl~a~~~ 717 (759)
++.++++|+|||+|++|..+. .......+.++++++|+++..+ .++. +.+ ..++|++.
T Consensus 175 l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 175 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 999999999999999997543 4455677899999999976443 3443 234 46777765
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.77 E-value=1.3e-17 Score=179.55 Aligned_cols=167 Identities=17% Similarity=0.283 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC----CCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT----QDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~----~~~ 579 (759)
+.||. |++++++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|... .++
T Consensus 92 ~~Y~e-~l~~l~l~~~--------~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~ 162 (314)
T 2b2c_A 92 FSYQE-MLAHLPMFAH--------PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHP 162 (314)
T ss_dssp SHHHH-HHHHHHHHHS--------SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCT
T ss_pred hHHHH-HHHHHHHhhC--------CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCC
Confidence 45876 6666665443 4668999999999999999998877789999999999999999998432 368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
|++++++|+.+++... ..+||+||+|..... .|+..+++.+|
T Consensus 163 rv~~~~~D~~~~l~~~--------------------------------~~~fD~Ii~d~~~~~------~~~~~l~t~~~ 204 (314)
T 2b2c_A 163 KLDLFCGDGFEFLKNH--------------------------------KNEFDVIITDSSDPV------GPAESLFGQSY 204 (314)
T ss_dssp TEEEECSCHHHHHHHC--------------------------------TTCEEEEEECCC-------------------H
T ss_pred CEEEEEChHHHHHHhc--------------------------------CCCceEEEEcCCCCC------CcchhhhHHHH
Confidence 9999999999998763 267999999875431 25667888999
Q ss_pred HHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ecC--Ccc-EEEEEecC
Q 004354 660 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE--DVN-LVLFGLSS 717 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N-~Vl~a~~~ 717 (759)
++.++++|+|||+|+++..+. +......+.+.++++|+++..+. ++. +.+ .+++|++.
T Consensus 205 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~ 269 (314)
T 2b2c_A 205 YELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKN 269 (314)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCC
Confidence 999999999999999987332 44556778899999999864433 333 234 47778766
No 11
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.77 E-value=1.5e-17 Score=177.57 Aligned_cols=168 Identities=20% Similarity=0.257 Sum_probs=126.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC----CCCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----FTQDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg----l~~~~ 579 (759)
+.||..| .+++++.+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|. -..++
T Consensus 74 ~~y~e~l-~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~ 144 (296)
T 1inl_A 74 FMYHEML-AHVPMFLH--------PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDP 144 (296)
T ss_dssp HHHHHHH-HHHHHHHS--------SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHHHH-hHHHHhcC--------CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCC
Confidence 5688754 45554433 45689999999999999999988777899999999999999999982 12368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
+++++++|+.+++.... .+||+|++|+.... . .|+..+.+.+|
T Consensus 145 ~v~~~~~D~~~~l~~~~--------------------------------~~fD~Ii~d~~~~~-~----~~~~~l~~~~~ 187 (296)
T 1inl_A 145 RAEIVIANGAEYVRKFK--------------------------------NEFDVIIIDSTDPT-A----GQGGHLFTEEF 187 (296)
T ss_dssp TEEEEESCHHHHGGGCS--------------------------------SCEEEEEEEC---------------CCSHHH
T ss_pred ceEEEECcHHHHHhhCC--------------------------------CCceEEEEcCCCcc-c----CchhhhhHHHH
Confidence 99999999999976532 57999999876431 1 25677888999
Q ss_pred HHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ec---CCccEEEEEecC
Q 004354 660 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LE---EDVNLVLFGLSS 717 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~---~~~N~Vl~a~~~ 717 (759)
++.+++.|+|||+|+++..+. +......++++++++|+++..+. ++ .+.+.+++|++.
T Consensus 188 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~ 252 (296)
T 1inl_A 188 YQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFASKG 252 (296)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEecCC
Confidence 999999999999999997553 45566788999999999876554 33 344567778765
No 12
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.76 E-value=2.1e-18 Score=184.06 Aligned_cols=168 Identities=20% Similarity=0.313 Sum_probs=123.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-----CCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----TQD 578 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-----~~~ 578 (759)
+.||.. ++.+++..+ +++.+||+||+|+|.++..+..+.+..+|++|||||.|+++|+++|.. -.+
T Consensus 67 ~~Y~e~-l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~ 137 (294)
T 3adn_A 67 FIYHEM-MTHVPLLAH--------GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDD 137 (294)
T ss_dssp HHHHHH-HHHHHHHHS--------TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTC
T ss_pred hHHHHH-HHHHHHhcC--------CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccC
Confidence 668764 445555443 567899999999999999999887778999999999999999999842 147
Q ss_pred CCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHH
Q 004354 579 KSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGS 658 (759)
Q Consensus 579 ~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~ 658 (759)
+|++++++||.++++.. ..+||+||+|...+. .|+..+++.+
T Consensus 138 ~rv~~~~~D~~~~l~~~--------------------------------~~~fDvIi~D~~~p~------~~~~~l~~~~ 179 (294)
T 3adn_A 138 PRFKLVIDDGVNFVNQT--------------------------------SQTFDVIISDCTDPI------GPGESLFTSA 179 (294)
T ss_dssp TTCCEECSCSCC---CC--------------------------------CCCEEEEEECC----------------CCHH
T ss_pred CceEEEEChHHHHHhhc--------------------------------CCCccEEEECCCCcc------CcchhccHHH
Confidence 89999999999998653 267999999876542 2577889999
Q ss_pred HHHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ecCC--cc-EEEEEecCC
Q 004354 659 FLLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEED--VN-LVLFGLSSE 718 (759)
Q Consensus 659 fl~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~~--~N-~Vl~a~~~~ 718 (759)
|++.++++|+|||+|++|..+. .......++.+++++|+.+..+. ++.. .+ ..++|++..
T Consensus 180 f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 246 (294)
T 3adn_A 180 FYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEESCT
T ss_pred HHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEeCCc
Confidence 9999999999999999998543 33456778999999999865443 3432 33 456777654
No 13
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.71 E-value=5.1e-16 Score=166.37 Aligned_cols=169 Identities=20% Similarity=0.227 Sum_probs=125.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC----CCCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG----FTQDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg----l~~~~ 579 (759)
..||..| ..+++..+ +.+.+||+||+|+|.++..+..+.+..+|++||+||.++++|+++|. -..++
T Consensus 79 ~~y~e~l-~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~ 149 (304)
T 3bwc_A 79 FVYHEVL-GHTSLCSH--------PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADP 149 (304)
T ss_dssp HHHHHHH-HHHHHTTS--------SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHHHH-hhhhhhcC--------CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCC
Confidence 4577654 44444432 46689999999999999999988777899999999999999999982 12468
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
|++++++|+.+++.... ..+||+|++|..... .|+..+++.+|
T Consensus 150 ~v~~~~~D~~~~~~~~~-------------------------------~~~fDvIi~d~~~~~------~~~~~l~~~~~ 192 (304)
T 3bwc_A 150 RATVRVGDGLAFVRQTP-------------------------------DNTYDVVIIDTTDPA------GPASKLFGEAF 192 (304)
T ss_dssp TEEEEESCHHHHHHSSC-------------------------------TTCEEEEEEECC---------------CCHHH
T ss_pred cEEEEECcHHHHHHhcc-------------------------------CCceeEEEECCCCcc------ccchhhhHHHH
Confidence 99999999999986522 267999999875432 25778889999
Q ss_pred HHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHh-cCceEEEee--c---CCccEEEEEecCC
Q 004354 660 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMV-FNHLFCLQL--E---EDVNLVLFGLSSE 718 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~v-F~~v~~~~~--~---~~~N~Vl~a~~~~ 718 (759)
|+.++++|+|||+|+++..+. .......+.+.++++ |+.+..+.. + .+....++|++.+
T Consensus 193 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~~~ 259 (304)
T 3bwc_A 193 YKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSKKA 259 (304)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEESSS
T ss_pred HHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeCCc
Confidence 999999999999999987553 334567788999999 998765543 3 3445577788763
No 14
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.71 E-value=2.2e-16 Score=169.24 Aligned_cols=167 Identities=18% Similarity=0.267 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC----CCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl----~~~~ 579 (759)
..||. |+.++++..+ ..+.+||+||+|+|.++..+..+.|..+|++||+||.++++|+++|.. ..++
T Consensus 79 ~~y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~ 149 (304)
T 2o07_A 79 FSYQE-MIANLPLCSH--------PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSS 149 (304)
T ss_dssp HHHHH-HHHHHHHTTS--------SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCT
T ss_pred hHHHH-HHHHHHHhhC--------CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCC
Confidence 45765 5556665443 466899999999999999999887778999999999999999999842 1368
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
+++++++||.+++.... .+||+||+|..... .|+..+.+.+|
T Consensus 150 rv~v~~~Da~~~l~~~~--------------------------------~~fD~Ii~d~~~~~------~~~~~l~~~~~ 191 (304)
T 2o07_A 150 KLTLHVGDGFEFMKQNQ--------------------------------DAFDVIITDSSDPM------GPAESLFKESY 191 (304)
T ss_dssp TEEEEESCHHHHHHTCS--------------------------------SCEEEEEEECC-----------------CHH
T ss_pred cEEEEECcHHHHHhhCC--------------------------------CCceEEEECCCCCC------CcchhhhHHHH
Confidence 99999999999987532 57999999875432 24566778899
Q ss_pred HHHHHHccCcCcEEEEEecC--CChhHHHHHHHHHHHhcCceEEE--eecC---CccEEEEEecC
Q 004354 660 LLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFCL--QLEE---DVNLVLFGLSS 717 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~--~~~~~~~~v~~~l~~vF~~v~~~--~~~~---~~N~Vl~a~~~ 717 (759)
++.++++|+|||+|+++..+ ........+.+.++++|+++... .++. +....++|++.
T Consensus 192 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~~ 256 (304)
T 2o07_A 192 YQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKN 256 (304)
T ss_dssp HHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeCC
Confidence 99999999999999998744 34455677889999999986433 2333 22345677765
No 15
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.70 E-value=1.1e-16 Score=167.02 Aligned_cols=137 Identities=15% Similarity=0.273 Sum_probs=104.3
Q ss_pred CCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHH
Q 004354 26 TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVIS 105 (759)
Q Consensus 26 ~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~ 105 (759)
.+.+||+++|.... ..+.+....+.+...+...+.. .++.+|||+|||+|.++..|++.|+ +|+|||+|+.||+
T Consensus 31 ~~~~~Wd~~y~~~~--~~~~~~~~~~~l~~~~~~~~~~---~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~ 104 (252)
T 2gb4_A 31 LTLEDWKEKWVTRH--ISFHQEQGHQLLKKHLDTFLKG---QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIR 104 (252)
T ss_dssp CCHHHHHHHHHHTC--CTTCCTTCCHHHHHHHHHHHTT---CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHH
T ss_pred CCHHHHHHHHhcCC--CCcccCCCCHHHHHHHHHhccC---CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHH
Confidence 46899999998762 2232223333444444443321 3578999999999999999999998 5999999999999
Q ss_pred HHHHHhcc------------------CCCCcEEEEeecccCC----CcccEEEeCCCCh----hHHHHHHHHHHHhcccC
Q 004354 106 DMLRRNVR------------------DRSDMRWRVMDMTSMQ----GGLDALMEPELGH----KLGNQYLSEVKRLLKSG 159 (759)
Q Consensus 106 ~a~~r~~~------------------~~~~i~f~~~D~~~~~----gtfD~Ii~~~~~~----~~~~~~l~ei~rvLkpG 159 (759)
.|+++... ...+++|+++|+.+++ ++||+|++....+ .....+++++.++||||
T Consensus 105 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG 184 (252)
T 2gb4_A 105 EFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE 184 (252)
T ss_dssp HHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE
T ss_pred HHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC
Confidence 99877631 2468999999999886 6899999765332 23778999999999999
Q ss_pred cEEEEEEcC
Q 004354 160 GKFVCLTLA 168 (759)
Q Consensus 160 G~liiit~~ 168 (759)
|+++++++.
T Consensus 185 G~l~l~~~~ 193 (252)
T 2gb4_A 185 FQYLVAVLS 193 (252)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEe
Confidence 999877653
No 16
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.68 E-value=4.2e-16 Score=163.57 Aligned_cols=154 Identities=12% Similarity=0.038 Sum_probs=118.9
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC----CCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl----~~~~ 579 (759)
+.||..| .++++..+ +.+.+||+||+|+|.++..+..+ + .+|++||+||.|+++|+++|.. ..++
T Consensus 56 ~~y~e~l-~~~~~~~~--------~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~ 124 (262)
T 2cmg_A 56 HIESELL-AHMGGCTK--------KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNK 124 (262)
T ss_dssp HHHHHHH-HHHHHTTS--------SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCT
T ss_pred HHHHHHH-HHHhhhcC--------CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCC
Confidence 5687654 44554433 46689999999999999988888 7 8999999999999999999843 1468
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
|++++++||.+++ .+||+||+|+. + | ..|
T Consensus 125 rv~~~~~D~~~~~------------------------------------~~fD~Ii~d~~--d--------p-----~~~ 153 (262)
T 2cmg_A 125 NFTHAKQLLDLDI------------------------------------KKYDLIFCLQE--P--------D-----IHR 153 (262)
T ss_dssp TEEEESSGGGSCC------------------------------------CCEEEEEESSC--C--------C-----HHH
T ss_pred eEEEEechHHHHH------------------------------------hhCCEEEECCC--C--------h-----HHH
Confidence 9999999998875 25999999842 2 1 239
Q ss_pred HHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEee--c-CCccEEEEEecCCC
Q 004354 660 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQL--E-EDVNLVLFGLSSES 719 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~~--~-~~~N~Vl~a~~~~~ 719 (759)
++.+++.|+|||+|+++..+. +......+.++++++|+++..+.. + .+.+.+++|++...
T Consensus 154 ~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~~ 218 (262)
T 2cmg_A 154 IDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKTH 218 (262)
T ss_dssp HHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSCC
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCCC
Confidence 999999999999999986443 334567788999999998765542 2 44566778887643
No 17
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.68 E-value=9.2e-16 Score=165.65 Aligned_cols=168 Identities=22% Similarity=0.344 Sum_probs=130.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC----CCCC
Q 004354 504 SSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF----TQDK 579 (759)
Q Consensus 504 ~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl----~~~~ 579 (759)
+.||. |+..+++..+ +.+.+||+||+|+|.++..+..+.|..+|++||+||.++++|++++.. ..++
T Consensus 100 ~~y~e-~l~~~~l~~~--------~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~ 170 (321)
T 2pt6_A 100 FAYHE-MMTHVPMTVS--------KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDK 170 (321)
T ss_dssp HHHHH-HHHHHHHHHS--------SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGST
T ss_pred hHHHH-HHHHHHHhcC--------CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCC
Confidence 56776 4445555433 456899999999999999999887778999999999999999999853 1268
Q ss_pred CeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHH
Q 004354 580 SLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSF 659 (759)
Q Consensus 580 rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~f 659 (759)
+++++++|+.+++.... .+||+|++|.... . .|+..+++.+|
T Consensus 171 ~v~~~~~D~~~~l~~~~--------------------------------~~fDvIi~d~~~p--~----~~~~~l~~~~~ 212 (321)
T 2pt6_A 171 RVNVFIEDASKFLENVT--------------------------------NTYDVIIVDSSDP--I----GPAETLFNQNF 212 (321)
T ss_dssp TEEEEESCHHHHHHHCC--------------------------------SCEEEEEEECCCS--S----SGGGGGSSHHH
T ss_pred cEEEEEccHHHHHhhcC--------------------------------CCceEEEECCcCC--C----CcchhhhHHHH
Confidence 99999999999987532 5799999987532 2 24567788999
Q ss_pred HHHHHHccCcCcEEEEEecCC--ChhHHHHHHHHHHHhcCceEEEe--ecC--CccE-EEEEecCC
Q 004354 660 LLTVKDALSEQGLFIVNLVSR--SQATKDMVISRMKMVFNHLFCLQ--LEE--DVNL-VLFGLSSE 718 (759)
Q Consensus 660 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--~~~--~~N~-Vl~a~~~~ 718 (759)
++.+++.|+|||+|+++..+. +......++++++++|+++..+. ++. +.++ .++|++..
T Consensus 213 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~as~~~ 278 (321)
T 2pt6_A 213 YEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTD 278 (321)
T ss_dssp HHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEEeeCCC
Confidence 999999999999999987553 44566778999999999865544 333 2344 46677653
No 18
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.63 E-value=4.5e-15 Score=160.96 Aligned_cols=168 Identities=21% Similarity=0.362 Sum_probs=127.4
Q ss_pred chHHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----CCCC
Q 004354 503 ASSYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----GFTQ 577 (759)
Q Consensus 503 ~~~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----gl~~ 577 (759)
.+.||. |+..+++..+ +.+.+||+||+|+|.++..|..+.|..+|++||+||.++++|+++| |+ .
T Consensus 103 e~~y~e-~L~~l~l~~~--------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl-~ 172 (334)
T 1xj5_A 103 ECAYQE-MITHLPLCSI--------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGY-E 172 (334)
T ss_dssp HHHHHH-HHHHHHHTTS--------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGG-G
T ss_pred chHHHH-HHHHHHHhhC--------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhcccc-C
Confidence 356776 5555665443 4678999999999999999998877789999999999999999998 33 3
Q ss_pred CCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChH
Q 004354 578 DKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG 657 (759)
Q Consensus 578 ~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~ 657 (759)
+++++++++|+.+++.... ..+||+||+|...+. .++..+...
T Consensus 173 ~~rv~~~~~D~~~~l~~~~-------------------------------~~~fDlIi~d~~~p~------~~~~~l~~~ 215 (334)
T 1xj5_A 173 DPRVNLVIGDGVAFLKNAA-------------------------------EGSYDAVIVDSSDPI------GPAKELFEK 215 (334)
T ss_dssp STTEEEEESCHHHHHHTSC-------------------------------TTCEEEEEECCCCTT------SGGGGGGSH
T ss_pred CCcEEEEECCHHHHHHhcc-------------------------------CCCccEEEECCCCcc------CcchhhhHH
Confidence 6799999999999987643 257999999875432 134567789
Q ss_pred HHHHHHHHccCcCcEEEEEecC--CChhHHHHHHHHHHHhcCceEE---EeecCC---ccEEEEEecC
Q 004354 658 SFLLTVKDALSEQGLFIVNLVS--RSQATKDMVISRMKMVFNHLFC---LQLEED---VNLVLFGLSS 717 (759)
Q Consensus 658 ~fl~~~~~~L~~~Gilv~N~~~--~~~~~~~~v~~~l~~vF~~v~~---~~~~~~---~N~Vl~a~~~ 717 (759)
+|++.++++|+|||+|+++.-+ ........++++++++|+.+.. ..++.. ....++|++.
T Consensus 216 ~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~ 283 (334)
T 1xj5_A 216 PFFQSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTE 283 (334)
T ss_dssp HHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECS
T ss_pred HHHHHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccC
Confidence 9999999999999999997433 2344456678999999995332 233332 3446777764
No 19
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.61 E-value=2.2e-12 Score=152.86 Aligned_cols=113 Identities=17% Similarity=0.206 Sum_probs=83.5
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
..+||.+|.|+|.++..+... ...+|++||+++.+++.|++.+ |+ .+++++++.+|+.+++....
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~ngl-~~~~v~~i~~D~~~~l~~~~---------- 607 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRLNGL-TGRAHRLIQADCLAWLREAN---------- 607 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTC-CSTTEEEEESCHHHHHHHCC----------
T ss_pred CCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC-CccceEEEecCHHHHHHhcC----------
Confidence 469999999999998887764 3347999999999999999987 44 23589999999999987642
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC----ChHHHHHHHHHccCcCcEEEEEecC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF----VEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f----~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
.+||+|++|...-..+..+ ...+ .-.+++..+.+.|+|||+|++-...
T Consensus 608 ----------------------~~fD~Ii~DPP~f~~~~~~---~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 608 ----------------------EQFDLIFIDPPTFSNSKRM---EDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp ----------------------CCEEEEEECCCSBC----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ----------------------CCccEEEECCccccCCccc---hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 6799999986331110000 0001 1246788999999999999976544
No 20
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.60 E-value=1.3e-15 Score=153.35 Aligned_cols=100 Identities=17% Similarity=0.323 Sum_probs=84.2
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhcc-------------CCCCcEEEEeecccCC----
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-------------DRSDMRWRVMDMTSMQ---- 129 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~-------------~~~~i~f~~~D~~~~~---- 129 (759)
.++.+|||+|||+|.++..|++.|+ +|+|+|+|+.|++.|+++... ...+++|+++|+.+++
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 4678999999999999999999988 599999999999999988642 2468999999999987
Q ss_pred CcccEEEeCCCCh----hHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 130 GGLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 130 gtfD~Ii~~~~~~----~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
++||+|++....+ .....++++++|+|||||+++++++
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~ 141 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITL 141 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 5899999855333 2367899999999999999666654
No 21
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.54 E-value=8e-14 Score=137.99 Aligned_cols=127 Identities=17% Similarity=0.269 Sum_probs=100.4
Q ss_pred CCCCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHH
Q 004354 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (759)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~ 103 (759)
.|...+||+..|.... .. ..+...+.. .++.+|||+|||+|.++..+++.|. +|+|+|+|+.+
T Consensus 4 ~~~~~~~~~~~~~~~~---------~~----~~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~ 66 (199)
T 2xvm_A 4 VIRDENYFTDKYELTR---------TH----SEVLEAVKV---VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMS 66 (199)
T ss_dssp CCCCTTHHHHHHTCCC---------CC----HHHHHHTTT---SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHH
T ss_pred EEechHHHhhhhcccc---------cc----HHHHHHhhc---cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHH
Confidence 3677889999886541 11 123344443 3567999999999999999999876 59999999999
Q ss_pred HHHHHHHhccC-CCCcEEEEeecccCC--CcccEEEeCCCChh----HHHHHHHHHHHhcccCcEEEEEEc
Q 004354 104 ISDMLRRNVRD-RSDMRWRVMDMTSMQ--GGLDALMEPELGHK----LGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 104 I~~a~~r~~~~-~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~----~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
++.++++.... .+++++.++|+.+++ ++||+|++....++ ....+++++.++|+|||++++++.
T Consensus 67 ~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 67 IANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp HHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 99998876443 347999999998876 78999999764432 478999999999999999888764
No 22
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.52 E-value=4.5e-14 Score=147.68 Aligned_cols=141 Identities=16% Similarity=0.134 Sum_probs=99.6
Q ss_pred CCCCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHH
Q 004354 24 DFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVV 103 (759)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~ 103 (759)
.|....||+.+|.... ...+. ..-...+...+.+++.. ...++.+|||||||+|.++..++..|+.+|+|+|+|+.|
T Consensus 14 ~~~~~~~~~~~y~~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~ 90 (263)
T 2a14_A 14 HFLPRDYLATYYSFDG-SPSPE-AEMLKFNLECLHKTFGP-GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRN 90 (263)
T ss_dssp HCCHHHHHHHHCCCCC-SCCHH-HHHHHHHHHHHHHHHST-TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHH
T ss_pred ccCHHHHHHHhcCCCc-ccchh-hHHHHHHHHHHHHHhcC-CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHH
Confidence 3777899999997652 11100 00011122234444422 124677999999999999887777888789999999999
Q ss_pred HHHHHHHhccCCC------------------------------CcE-EEEeecccC-------CCcccEEEeCCCChh--
Q 004354 104 ISDMLRRNVRDRS------------------------------DMR-WRVMDMTSM-------QGGLDALMEPELGHK-- 143 (759)
Q Consensus 104 I~~a~~r~~~~~~------------------------------~i~-f~~~D~~~~-------~gtfD~Ii~~~~~~~-- 143 (759)
++.+++++..... ++. ++++|+++. .++||+|++....++
T Consensus 91 l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~ 170 (263)
T 2a14_A 91 REELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECAC 170 (263)
T ss_dssp HHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC
T ss_pred HHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhc
Confidence 9999887543211 133 889999874 168999999875543
Q ss_pred ----HHHHHHHHHHHhcccCcEEEEEEc
Q 004354 144 ----LGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 144 ----~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
....++++++++|||||+|++.+.
T Consensus 171 ~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 171 CSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp SSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 357899999999999999999974
No 23
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=3.9e-14 Score=144.96 Aligned_cols=135 Identities=15% Similarity=0.259 Sum_probs=101.4
Q ss_pred CHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHH
Q 004354 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (759)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~ 106 (759)
..+||+++|.... . .|.... ....+..++.... .++.+|||+|||+|.++..|++.|. +|+|+|+|+.+++.
T Consensus 32 ~~~~w~~~~~~~~--~--~~~~~~--~~~~l~~~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~ 103 (235)
T 3lcc_A 32 EEGGWEKCWEEEI--T--PWDQGR--ATPLIVHLVDTSS-LPLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAK 103 (235)
T ss_dssp HHHHHHHHHHTTC--C--TTCCSS--CCHHHHHHHHTTC-SCCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHH
T ss_pred CHHHHHHHHhcCC--C--CcccCC--CCHHHHHHHHhcC-CCCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHH
Confidence 4689999998752 2 244221 1122333332211 2346999999999999999988766 49999999999999
Q ss_pred HHHHhccC--CCCcEEEEeecccCC--CcccEEEeCCCCh----hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 107 MLRRNVRD--RSDMRWRVMDMTSMQ--GGLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 107 a~~r~~~~--~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~----~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
++++.... ..+++|+++|+.+++ ++||+|++....+ .....+++++.++|+|||++++..+..
T Consensus 104 a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 104 ANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp HHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 99987542 246999999999876 7899999876433 247899999999999999999988753
No 24
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=5.4e-14 Score=141.73 Aligned_cols=135 Identities=16% Similarity=0.243 Sum_probs=104.6
Q ss_pred CCHHHHHHHHhhcCCCCccc----cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCH
Q 004354 26 TSKENWDKFFTIRGIGDSFE----WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (759)
Q Consensus 26 ~~~~yWd~~y~~~~~~~~~e----W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~ 101 (759)
.+.++|++.|... +.+. |+.. ..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+
T Consensus 12 ~~~~~~~~~~~~~---~~w~~~~~~~~~-~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~ 83 (216)
T 3ofk_A 12 NTYQSLERELAND---DPWRLDDNPFER-ERHTQLLRLSLSS---GAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMP 83 (216)
T ss_dssp SHHHHHHHHHTSS---SGGGTTTCHHHH-HHHHHHHHHHTTT---SSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCH
T ss_pred chHHHHHHHhcCC---CCcccccCHhHH-HHHHHHHHHHccc---CCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCH
Confidence 4678999999765 2222 2221 1233444445443 5678999999999999999998875 699999999
Q ss_pred HHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChhH-----HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 102 VVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHKL-----GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 102 ~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~~-----~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.+++.++++... .++++++++|+.+++ ++||+|++....++. ...+++++.++|+|||.+++.+...
T Consensus 84 ~~~~~a~~~~~~-~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 84 RAIGRACQRTKR-WSHISWAATDILQFSTAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHHTTT-CSSEEEEECCTTTCCCSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHhccc-CCCeEEEEcchhhCCCCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999988744 348999999999887 899999998754433 4688999999999999999987544
No 25
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.51 E-value=5.4e-14 Score=147.41 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=86.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHh----CCCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeecccCC-CcccEEEeCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA----GFHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQ-GGLDALMEPE 139 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~----G~~~VtgIDiS~~~I~~a~~r~~~~--~~~i~f~~~D~~~~~-gtfD~Ii~~~ 139 (759)
.++.+|||||||+|.++..|++. |+ +|+|+|+|+.||+.|+++.... ..+++|+++|+.+++ +.||+|++..
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 47889999999999999999876 23 5999999999999999987543 347999999999998 8899999977
Q ss_pred CChh----HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 140 LGHK----LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 140 ~~~~----~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
..++ ....++++++|+|||||+|++....
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 5543 2568999999999999999987653
No 26
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.50 E-value=2.6e-14 Score=149.53 Aligned_cols=108 Identities=19% Similarity=0.235 Sum_probs=91.0
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-- 129 (759)
.+.+.+..+.. .+.+|||||||+|.++..|++.|. +|+|+|+|+.|++.|+ ..++++|+++|+.+++
T Consensus 28 ~l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~-----~~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 28 ALFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQAL-----RHPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCC-----CCTTEEEEECCTTCCCCC
T ss_pred HHHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhh-----hcCCceeehhhhhhhccc
Confidence 45555666553 457999999999999999998865 6999999999987653 3478999999999887
Q ss_pred -CcccEEEeCCCChhH-HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 130 -GGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 130 -gtfD~Ii~~~~~~~~-~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++||+|+|....|+. ..+++++++|+|||||+|+++++..+
T Consensus 97 ~~sfD~v~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 97 PASVDVAIAAQAMHWFDLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SSCEEEEEECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred CCcccEEEEeeehhHhhHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 899999998877776 88999999999999999999987643
No 27
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.49 E-value=3.1e-13 Score=132.87 Aligned_cols=139 Identities=9% Similarity=0.054 Sum_probs=101.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC----CcccEEEeCC-C
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ----GGLDALMEPE-L 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~----gtfD~Ii~~~-~ 140 (759)
.++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.|+++.... ..++++++.|+.++. ++||+|+++. .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLSK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 4678999999999999999998844 6999999999999999887543 367999998887743 7899999862 1
Q ss_pred ----------ChhHHHHHHHHHHHhcccCcEEEEEEcCch-------hhhhhhcccc-CCCceEEEEEeCCCCCCCCCce
Q 004354 141 ----------GHKLGNQYLSEVKRLLKSGGKFVCLTLAES-------HVLGLLFPKF-RFGWKMSVHAIPQKSSSEPSLQ 202 (759)
Q Consensus 141 ----------~~~~~~~~l~ei~rvLkpGG~liiit~~~~-------~~~~~l~~~~-~~~w~v~~~~~~~~~~~~~~~~ 202 (759)
.......+++++.++|||||+++++.+... .....++... ..+|.+....... ....+
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~ 175 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN----QINTP 175 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS----CSSCC
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc----cCCCC
Confidence 112366889999999999999999987521 1222233332 2368777766654 23455
Q ss_pred EEEEEEEe
Q 004354 203 TFMVVADK 210 (759)
Q Consensus 203 ~f~~v~~K 210 (759)
+++++..|
T Consensus 176 ~~~~~i~~ 183 (185)
T 3mti_A 176 PFLVMLEK 183 (185)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 66666655
No 28
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=2.7e-13 Score=139.48 Aligned_cols=139 Identities=15% Similarity=0.189 Sum_probs=101.9
Q ss_pred CCHHHHHHHHhhcC--CCCccccccc-hhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHH
Q 004354 26 TSKENWDKFFTIRG--IGDSFEWYAE-WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKV 102 (759)
Q Consensus 26 ~~~~yWd~~y~~~~--~~~~~eW~~~-~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~ 102 (759)
...++|+++|.... ....+ |... .......+..++.. ..++.+|||+|||+|.++..|++.+. +|+|+|+|+.
T Consensus 14 ~~~~~w~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~ 89 (245)
T 3ggd_A 14 NVADAWEQYWNKTLVNSTPVL-WDANVERAVVVDLPRFELL--FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKS 89 (245)
T ss_dssp CHHHHHHHHHHHHHHHTCCCT-TCCCGGGTHHHHHHHHTTT--SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHH
T ss_pred chHHHHHHHHHhcccCCccce-ecchhHHHHHHHHHHHhhc--cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHH
Confidence 34667777776531 01122 3322 22233334444332 24678999999999999999999977 5999999999
Q ss_pred HHHHHHHHhccCCCCcEEEEeecccCC--------CcccEEEeCCCChh----HHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 103 VISDMLRRNVRDRSDMRWRVMDMTSMQ--------GGLDALMEPELGHK----LGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 103 ~I~~a~~r~~~~~~~i~f~~~D~~~~~--------gtfD~Ii~~~~~~~----~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+++.++++. ...+++|+++|+.+++ ..||+|++....++ ....+++++.++|+|||++++.++..+
T Consensus 90 ~~~~a~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 90 ALEIAAKEN--TAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp HHHHHHHHS--CCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred HHHHHHHhC--cccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 999998886 2347999999998865 24999999764443 378999999999999999999987654
No 29
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.48 E-value=6.4e-14 Score=142.26 Aligned_cols=130 Identities=18% Similarity=0.329 Sum_probs=91.2
Q ss_pred CHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHH
Q 004354 27 SKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISD 106 (759)
Q Consensus 27 ~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~ 106 (759)
+.+||+.+|.... .....++. .+..++ +++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.
T Consensus 2 ~~~yw~~~~~~~~-~~~~~~~~-------~~~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~ 67 (235)
T 3sm3_A 2 PESYWEKVSGKNI-PSSLDLYP-------IIHNYL-----QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRL 67 (235)
T ss_dssp -----------------CCCCT-------THHHHC-----CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHH
T ss_pred chhHHHHHhhccC-CCHHHHHH-------HHHHhC-----CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHH
Confidence 3579999887541 11112222 344555 3578999999999999999999876 59999999999999
Q ss_pred HHHHhccCCC------CcEEEEeecccCC---CcccEEEeCCCChhH-----HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 107 MLRRNVRDRS------DMRWRVMDMTSMQ---GGLDALMEPELGHKL-----GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 107 a~~r~~~~~~------~i~f~~~D~~~~~---gtfD~Ii~~~~~~~~-----~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++++...... ++++.++|+.+++ ++||+|++....++. ...+++++.++|+|||++++.++...
T Consensus 68 a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 68 AETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp HHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred HHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 9988754332 5799999998876 789999997654432 44899999999999999999987653
No 30
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.48 E-value=5.3e-13 Score=134.64 Aligned_cols=96 Identities=21% Similarity=0.253 Sum_probs=84.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChhH-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHKL- 144 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~~- 144 (759)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.. .+++++++|+.+++ ++||+|++....++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCCSCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCCCCeEEEEECcchhcCC
Confidence 678999999999999999999876 59999999999999988764 57999999999887 799999998765543
Q ss_pred -H--HHHHHHHHHhcccCcEEEEEEc
Q 004354 145 -G--NQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 145 -~--~~~l~ei~rvLkpGG~liiit~ 167 (759)
. ..+++++.++|||||.+++.+.
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 3 4499999999999999999874
No 31
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.48 E-value=2e-13 Score=140.74 Aligned_cols=100 Identities=11% Similarity=0.089 Sum_probs=87.4
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
.++.+|||+|||+|.++..+++.+..+|+++|+|+.+++.++++.... .+++++++|+.+++ ++||+|++....++
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 567899999999999999999887767999999999999999887443 67999999998876 78999999775443
Q ss_pred ----HHHHHHHHHHHhcccCcEEEEEEc
Q 004354 144 ----LGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 144 ----~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
....+++++.++|+|||++++.+.
T Consensus 171 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 378999999999999999999874
No 32
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.47 E-value=5.2e-14 Score=140.35 Aligned_cols=130 Identities=19% Similarity=0.245 Sum_probs=99.1
Q ss_pred HHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHH
Q 004354 30 NWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLR 109 (759)
Q Consensus 30 yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~ 109 (759)
||+++|... .+.|..........+...+ .++ +|||+|||+|.++..+++.|. +|+|+|+|+.+++.+++
T Consensus 1 ~W~~~y~~~----~~~~~~~~~~~l~~~~~~~-----~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~ 69 (202)
T 2kw5_A 1 MWDERFSQS----EYVYGTEPNDFLVSVANQI-----PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQ 69 (202)
T ss_dssp CCCCCCCCC----CCCCCCCCCSSHHHHHHHS-----CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHH
T ss_pred Chhhhhccc----chhhccCchHHHHHHHHhC-----CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHH
Confidence 677777644 1234333333333333333 245 999999999999999998877 69999999999999998
Q ss_pred HhccCCCCcEEEEeecccCC---CcccEEEeCCCC--hhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 110 RNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELG--HKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 110 r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~--~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+......++.+.++|+.+++ ++||+|++.... ......+++++.++|+|||++++.++...
T Consensus 70 ~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 70 LAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp HHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred HHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 87655558999999998876 789999985422 23488999999999999999999987654
No 33
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=2.7e-13 Score=139.87 Aligned_cols=130 Identities=16% Similarity=0.199 Sum_probs=98.1
Q ss_pred HHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHH
Q 004354 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (759)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a 107 (759)
++||+..|.... ..+......+..++......++.+|||+|||+|.++..+++.|+ +|+|+|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a 79 (252)
T 1wzn_A 9 AEYYDTIYRRRI--------ERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVA 79 (252)
T ss_dssp GGGHHHHTHHHH--------HTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHH
T ss_pred HHHHHHHHhcch--------hhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHH
Confidence 678888876531 11222223333333322224568999999999999999999877 599999999999999
Q ss_pred HHHhccCCCCcEEEEeecccCC--CcccEEEeCCC-C----hhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 108 LRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPEL-G----HKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 108 ~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~-~----~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+++......+++++++|+.+++ ++||+|++... . ......+++++.++|+|||.+++..
T Consensus 80 ~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 80 RRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp HHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 9987666668999999999876 78999998531 1 1247899999999999999998754
No 34
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.47 E-value=1.9e-13 Score=141.62 Aligned_cols=139 Identities=15% Similarity=0.181 Sum_probs=101.1
Q ss_pred CCCCHHHHHHHHhhcCCCCcc--ccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCH
Q 004354 24 DFTSKENWDKFFTIRGIGDSF--EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (759)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~--eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~ 101 (759)
.|...+||+.+|.... ..+ .++..+ ....+..++.. ...++.+|||+|||+|.++..++..++.+|+|+|+|+
T Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~ 89 (265)
T 2i62_A 15 HFNPRDYLEKYYSFGS--RHCAENEILRH--LLKNLFKIFCL-GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTD 89 (265)
T ss_dssp HCCHHHHHHHHHCCCS--SCHHHHHHHHH--HHHHHHHHHHS-SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCH
T ss_pred hcCHHHHHHHHhCcCC--cchhHHHHHHh--hHHHHHHHhcc-cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCH
Confidence 4667889999997652 111 111111 11222233322 2245679999999999999999888775699999999
Q ss_pred HHHHHHHHHhccCCC------------------------------Cc-EEEEeecccCC-------CcccEEEeCCCCh-
Q 004354 102 VVISDMLRRNVRDRS------------------------------DM-RWRVMDMTSMQ-------GGLDALMEPELGH- 142 (759)
Q Consensus 102 ~~I~~a~~r~~~~~~------------------------------~i-~f~~~D~~~~~-------gtfD~Ii~~~~~~- 142 (759)
.+++.++++...... ++ ++.++|+.+.. ++||+|++....+
T Consensus 90 ~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~ 169 (265)
T 2i62_A 90 QNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDA 169 (265)
T ss_dssp HHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHH
T ss_pred HHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhh
Confidence 999999888743211 17 89999998753 6799999987555
Q ss_pred ---h--HHHHHHHHHHHhcccCcEEEEEEc
Q 004354 143 ---K--LGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 143 ---~--~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+ ....+++++.++|+|||++++...
T Consensus 170 ~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 170 ACPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hcCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 3 488999999999999999998874
No 35
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.47 E-value=1.1e-13 Score=141.48 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=86.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChhH-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHKL- 144 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~~- 144 (759)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++... +++++++|+.++. ++||+|++....++.
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 117 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQLPRRYDNIVLTHVLEHID 117 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCCCSSCEEEEEEESCGGGCS
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcCcCCcccEEEEhhHHHhhc
Confidence 567899999999999999998877 599999999999999888643 7999999998875 889999998766554
Q ss_pred -HHHHHHHHH-HhcccCcEEEEEEcCch
Q 004354 145 -GNQYLSEVK-RLLKSGGKFVCLTLAES 170 (759)
Q Consensus 145 -~~~~l~ei~-rvLkpGG~liiit~~~~ 170 (759)
...+++++. ++|||||++++.+....
T Consensus 118 ~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 118 DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 789999999 99999999999987654
No 36
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=3.6e-13 Score=139.17 Aligned_cols=101 Identities=15% Similarity=0.208 Sum_probs=89.2
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++.. ..+++++++|+.+++ ++||+|++....++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 120 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHY 120 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEEEEESCGGG
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEEEEchhhhh
Confidence 4678999999999999999999988679999999999999988864 568999999998876 79999999876554
Q ss_pred H--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 144 L--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 144 ~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
. ...+++++.++|+|||++++.+...
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 3 8899999999999999999887543
No 37
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.46 E-value=6.8e-13 Score=136.31 Aligned_cols=100 Identities=15% Similarity=0.146 Sum_probs=85.6
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
++.+|||+|||+|.++..|++.+..+|+|+|+|+.+++.++++.... ..+++++++|+.+++ ++||+|++....++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 57899999999999999998887668999999999999999887543 346899999998876 68999999875443
Q ss_pred H----HHHHHHHHHHhcccCcEEEEEEc
Q 004354 144 L----GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 144 ~----~~~~l~ei~rvLkpGG~liiit~ 167 (759)
. ...+++++.++|+|||++++.+.
T Consensus 159 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 186 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRPNGIIVIKDN 186 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence 3 55899999999999999999765
No 38
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=6e-13 Score=132.67 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=90.3
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--- 129 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--- 129 (759)
....+..++.. .+.+|||+|||+|.++..|++.|. +|+|+|+|+.+++.++++. ++++++++|+.+++
T Consensus 30 ~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~ 100 (203)
T 3h2b_A 30 DRVLIEPWATG----VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH----PSVTFHHGTITDLSDSP 100 (203)
T ss_dssp THHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC----TTSEEECCCGGGGGGSC
T ss_pred HHHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC----CCCeEEeCcccccccCC
Confidence 34455555543 367999999999999999999977 4999999999999988773 57999999998876
Q ss_pred CcccEEEeCCCChh----HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 130 GGLDALMEPELGHK----LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 130 gtfD~Ii~~~~~~~----~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
++||+|++....++ ....+++++.++|+|||++++.++..
T Consensus 101 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 101 KRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp CCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred CCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 79999999764433 47899999999999999999988654
No 39
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.45 E-value=9.2e-13 Score=130.82 Aligned_cols=142 Identities=13% Similarity=0.091 Sum_probs=108.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC----CcccEEEeC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ----GGLDALMEP 138 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~----gtfD~Ii~~ 138 (759)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.++++..... .+++++++|+.++. ++||+|+++
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 46789999999999999999887 23479999999999999999875543 47999999987764 789999986
Q ss_pred CCC-----------hhHHHHHHHHHHHhcccCcEEEEEEcCc-------hhhhhhhcccc-CCCceEEEEEeCCCCCCCC
Q 004354 139 ELG-----------HKLGNQYLSEVKRLLKSGGKFVCLTLAE-------SHVLGLLFPKF-RFGWKMSVHAIPQKSSSEP 199 (759)
Q Consensus 139 ~~~-----------~~~~~~~l~ei~rvLkpGG~liiit~~~-------~~~~~~l~~~~-~~~w~v~~~~~~~~~~~~~ 199 (759)
... ......+++++.++|+|||++++..+.. ......++... ..+|.+....+.+ ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~----~~ 176 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFIN----QA 176 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETT----CC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEecc----Cc
Confidence 421 1135679999999999999999998643 12233333333 3478888877765 34
Q ss_pred CceEEEEEEEeCC
Q 004354 200 SLQTFMVVADKEN 212 (759)
Q Consensus 200 ~~~~f~~v~~K~~ 212 (759)
..|+|+++.+|..
T Consensus 177 ~~pp~~~~~~~~~ 189 (197)
T 3eey_A 177 NCPPILVCIEKIS 189 (197)
T ss_dssp SCCCEEEEEEECC
T ss_pred cCCCeEEEEEEcc
Confidence 5688888888754
No 40
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.45 E-value=5.8e-13 Score=133.50 Aligned_cols=130 Identities=20% Similarity=0.188 Sum_probs=101.2
Q ss_pred HHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHH
Q 004354 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (759)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a 107 (759)
.++|+..+... |...++.+...+...+.. .+. +|||+|||+|.++..+++....+|+|+|+|+.+++.+
T Consensus 14 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~---~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a 82 (219)
T 3dlc_A 14 AKNMDEISKTL-------FAPIYPIIAENIINRFGI---TAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIA 82 (219)
T ss_dssp HHHHHHHHHTT-------TTTHHHHHHHHHHHHHCC---CEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHH
T ss_pred hhhHHHHHHHh-------hccccHHHHHHHHHhcCC---CCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence 56777766543 122344555566666654 334 9999999999999999987333699999999999999
Q ss_pred HHHhccCC--CCcEEEEeecccCC---CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 108 LRRNVRDR--SDMRWRVMDMTSMQ---GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 108 ~~r~~~~~--~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++++.... ++++++++|+.+++ ++||+|++....++. ...+++++.++|+|||++++....
T Consensus 83 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 83 LKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp HHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 99875543 47999999999876 789999998755543 789999999999999999988643
No 41
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.45 E-value=1.6e-12 Score=131.38 Aligned_cols=156 Identities=18% Similarity=0.162 Sum_probs=111.7
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC------CCcEEEEeec
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDM 125 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~------~~i~f~~~D~ 125 (759)
....+..++.. .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.+++++.... ++++++++|+
T Consensus 17 ~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~ 93 (219)
T 3jwg_A 17 RLGTVVAVLKS---VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL 93 (219)
T ss_dssp HHHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS
T ss_pred HHHHHHHHHhh---cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc
Confidence 33445555543 4678999999999999999998754 579999999999999998874322 2799999999
Q ss_pred ccCC---CcccEEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEcCchh-----------------------hhhh
Q 004354 126 TSMQ---GGLDALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTLAESH-----------------------VLGL 175 (759)
Q Consensus 126 ~~~~---gtfD~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~~~~~-----------------------~~~~ 175 (759)
...+ ++||+|++....++. ...+++++.++|+|||.++........ ....
T Consensus 94 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (219)
T 3jwg_A 94 VYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQT 173 (219)
T ss_dssp SSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHH
T ss_pred cccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHH
Confidence 7766 789999998755443 478999999999999976665432110 0010
Q ss_pred hccc--cCCCceEEEEEeCCCCCCCCCceEEEEEEEeCC
Q 004354 176 LFPK--FRFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 212 (759)
Q Consensus 176 l~~~--~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~ 212 (759)
++.. ...||.+....+.... ...+.+.-+-|++|+.
T Consensus 174 ~~~~l~~~~Gf~v~~~~~g~~~-~~~g~~~qi~~~~~~~ 211 (219)
T 3jwg_A 174 WAVKVAEKYGYSVRFLQIGEID-DEFGSPTQMGVFTLGA 211 (219)
T ss_dssp HHHHHHHHHTEEEEEEEESCCC-TTSCCSEEEEEEEECC
T ss_pred HHHHHHHHCCcEEEEEecCCcc-ccCCCCeEEEEEeccC
Confidence 0001 1237888888877643 3566778888888863
No 42
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=7.9e-13 Score=129.84 Aligned_cols=139 Identities=20% Similarity=0.266 Sum_probs=98.6
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeC-CCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEP-ELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~-~~~~ 142 (759)
.++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++. ++++++++|+.+++ +.||+|++. ...+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~ 119 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF----PEARWVVGDLSVDQISETDFDLIVSAGNVMG 119 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSEEEECCTTTSCCCCCCEEEEEECCCCGG
T ss_pred cCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC----CCCcEEEcccccCCCCCCceeEEEECCcHHh
Confidence 3678999999999999999998876 6999999999999998775 46899999998865 789999997 4332
Q ss_pred ----hHHHHHHHHHHHhcccCcEEEEEEcCchh-hhhhhcccc-CCCceEEEEEeCCCCC-CCCCceEEEEEEEe
Q 004354 143 ----KLGNQYLSEVKRLLKSGGKFVCLTLAESH-VLGLLFPKF-RFGWKMSVHAIPQKSS-SEPSLQTFMVVADK 210 (759)
Q Consensus 143 ----~~~~~~l~ei~rvLkpGG~liiit~~~~~-~~~~l~~~~-~~~w~v~~~~~~~~~~-~~~~~~~f~~v~~K 210 (759)
.....+++++.++|+|||++++....... ....+.... ..||.+.......... .....+.++++++|
T Consensus 120 ~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k 194 (195)
T 3cgg_A 120 FLAEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTK 194 (195)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEE
T ss_pred hcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEec
Confidence 23689999999999999999987754321 111121111 1266655433221111 12344566677665
No 43
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.45 E-value=1e-12 Score=131.53 Aligned_cols=155 Identities=13% Similarity=0.076 Sum_probs=110.7
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSM 128 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~ 128 (759)
..+...+...+.. .++.+|||+|||+|.++..+++.+ ..+|+++|+|+.+++.++++.... ..+++++++|+.+.
T Consensus 26 ~~i~~~~l~~l~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 26 QEVRAVTLSKLRL---QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT
T ss_pred HHHHHHHHHHcCC---CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh
Confidence 4555556666654 578899999999999999999986 357999999999999999886442 35799999999655
Q ss_pred C---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCchhh--hhhhccccCCCceEEEEEeCCC-----CC--
Q 004354 129 Q---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV--LGLLFPKFRFGWKMSVHAIPQK-----SS-- 196 (759)
Q Consensus 129 ~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~--~~~l~~~~~~~w~v~~~~~~~~-----~~-- 196 (759)
. +.||+|++....+ ....+++++.++|+|||++++.+...... ...++. ..+|.+.+..+... ..
T Consensus 103 ~~~~~~~D~i~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~--~~g~~~~~~~~~~~~~~~~~~~~ 179 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGG-MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLE--DHGYMVEVACVNVAKTKGLTEYK 179 (204)
T ss_dssp CTTSCCCSEEEESCCTT-CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHH--HTTCEEEEEEEEEEEEC---CCC
T ss_pred hhcCCCCCEEEECCCCc-CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHH--HCCCceeEEEEEeecceEccceE
Confidence 3 7899999976543 57799999999999999999987654322 222222 23565444333111 00
Q ss_pred -CCCCceEEEEEEEeC
Q 004354 197 -SEPSLQTFMVVADKE 211 (759)
Q Consensus 197 -~~~~~~~f~~v~~K~ 211 (759)
.....|+|++.++|.
T Consensus 180 ~~~~~~Pv~i~~~~~~ 195 (204)
T 3e05_A 180 MFESHNPVYIITAWKS 195 (204)
T ss_dssp BCEECCCEEEEEEECC
T ss_pred EeccCCCeEEEEEEcC
Confidence 123457888877764
No 44
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.44 E-value=3.1e-13 Score=142.75 Aligned_cols=146 Identities=16% Similarity=0.215 Sum_probs=109.1
Q ss_pred ccccccccCCCCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEE
Q 004354 16 TDLLQTLGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGIT 95 (759)
Q Consensus 16 ~~lP~~~~~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~Vt 95 (759)
+.+|..+.+-...++|+.++... ...+..+...+...+.. .++.+|||||||+|.++..|++.|. +|+
T Consensus 16 ~~~~~~y~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~ 83 (293)
T 3thr_A 16 EGIPDQYADGEAARVWQLYIGDT--------RSRTAEYKAWLLGLLRQ---HGCHRVLDVACGTGVDSIMLVEEGF-SVT 83 (293)
T ss_dssp TTSCCTTTTCHHHHHHHHHHTCC--------SCBCHHHHHHHHHHHHH---TTCCEEEETTCTTSHHHHHHHHTTC-EEE
T ss_pred ccChhhhcCchHHHHHHHHHhcC--------cchHHHHHHHHHHHhcc---cCCCEEEEecCCCCHHHHHHHHCCC-eEE
Confidence 44665554444566898877433 23334555666666654 4678999999999999999999987 699
Q ss_pred EEeCCHHHHHHHHHHhccC-----CCCcEEEEeecccCC------CcccEEEeC-CCCh---------hHHHHHHHHHHH
Q 004354 96 NVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSMQ------GGLDALMEP-ELGH---------KLGNQYLSEVKR 154 (759)
Q Consensus 96 gIDiS~~~I~~a~~r~~~~-----~~~i~f~~~D~~~~~------gtfD~Ii~~-~~~~---------~~~~~~l~ei~r 154 (759)
|+|+|+.+++.++++.... ..++.+.++|+.+++ ++||+|+|. ...+ .....+++++++
T Consensus 84 gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~ 163 (293)
T 3thr_A 84 SVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIAS 163 (293)
T ss_dssp EEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHH
Confidence 9999999999998875322 246889999987742 799999996 4332 237899999999
Q ss_pred hcccCcEEEEEEcCchhhh
Q 004354 155 LLKSGGKFVCLTLAESHVL 173 (759)
Q Consensus 155 vLkpGG~liiit~~~~~~~ 173 (759)
+|||||++++.........
T Consensus 164 ~LkpgG~l~~~~~~~~~~~ 182 (293)
T 3thr_A 164 MVRPGGLLVIDHRNYDYIL 182 (293)
T ss_dssp TEEEEEEEEEEEECHHHHH
T ss_pred HcCCCeEEEEEeCCHHHHh
Confidence 9999999999887655443
No 45
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=4e-13 Score=142.80 Aligned_cols=134 Identities=12% Similarity=0.188 Sum_probs=103.7
Q ss_pred CCCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHH--hCCCeEEEEeCCHH
Q 004354 25 FTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYD--AGFHGITNVDFSKV 102 (759)
Q Consensus 25 f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~--~G~~~VtgIDiS~~ 102 (759)
|.+..|..+.|...... | ...+...+..+.. .++.+|||+|||+|.++..|++ .+..+|+|+|+|+.
T Consensus 4 f~~~~~~~~~y~~~rp~-----y--~~~~~~~l~~~~~----~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~ 72 (299)
T 3g5t_A 4 FSASDFNSERYSSSRPS-----Y--PSDFYKMIDEYHD----GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSAT 72 (299)
T ss_dssp GGSTTCCHHHHHHHSCC-----C--CHHHHHHHHHHCC----SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHH
T ss_pred ccccccChHHHhhcCCC-----C--CHHHHHHHHHHhc----CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHH
Confidence 55555556666554211 1 2345555666654 3678999999999999999996 34567999999999
Q ss_pred HHHHHHHHhccC---CCCcEEEEeecccCC---------CcccEEEeCCCChhH-HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 103 VISDMLRRNVRD---RSDMRWRVMDMTSMQ---------GGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 103 ~I~~a~~r~~~~---~~~i~f~~~D~~~~~---------gtfD~Ii~~~~~~~~-~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+++.++++.... .++++|+++|+.+++ ++||+|++....++. ...+++++.++|+|||.+++.++..
T Consensus 73 ~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 152 (299)
T 3g5t_A 73 MIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWGYAD 152 (299)
T ss_dssp HHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 999999987654 578999999998875 479999998765554 8899999999999999999976653
No 46
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.44 E-value=6.8e-13 Score=133.77 Aligned_cols=109 Identities=13% Similarity=0.110 Sum_probs=90.7
Q ss_pred HHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC---C
Q 004354 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ---G 130 (759)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~---g 130 (759)
+...+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.++++.... .+++++.++|+.+++ +
T Consensus 29 ~~~~~~~---~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 105 (219)
T 3dh0_A 29 VLKEFGL---KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDN 105 (219)
T ss_dssp HHHHHTC---CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSS
T ss_pred HHHHhCC---CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCC
Confidence 4444443 567899999999999999999885 247999999999999999887443 347999999998876 7
Q ss_pred cccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 131 GLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 131 tfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+||+|++....++. ...+++++.++|+|||++++.++.
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 145 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK 145 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence 89999998765544 789999999999999999998764
No 47
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.44 E-value=4.5e-13 Score=142.42 Aligned_cols=117 Identities=17% Similarity=0.242 Sum_probs=95.0
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC----CCcEEEEeeccc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTS 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~----~~i~f~~~D~~~ 127 (759)
.....+...+.. ++.+|||||||+|.++..|++.|.. |+|+|+|+.+++.++++..... .+++|+++|+.+
T Consensus 70 ~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~~-v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~ 144 (299)
T 3g2m_A 70 SEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGWE-VTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA 144 (299)
T ss_dssp HHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTCC-EEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB
T ss_pred HHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc
Confidence 344445555543 3459999999999999999999875 9999999999999999876554 679999999998
Q ss_pred CC--CcccEEEeCC-----CChhHHHHHHHHHHHhcccCcEEEEEEcCchhhh
Q 004354 128 MQ--GGLDALMEPE-----LGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVL 173 (759)
Q Consensus 128 ~~--gtfD~Ii~~~-----~~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~ 173 (759)
++ ++||+|++.. ........+++++.++|+|||++++.++..+...
T Consensus 145 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 197 (299)
T 3g2m_A 145 FALDKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAE 197 (299)
T ss_dssp CCCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH
T ss_pred CCcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcccc
Confidence 87 8999999753 1222368999999999999999999998876553
No 48
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.43 E-value=8.6e-13 Score=137.68 Aligned_cols=115 Identities=19% Similarity=0.183 Sum_probs=94.0
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ 129 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~ 129 (759)
.....+...+. ...++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.++++..... ++++++++|+.+++
T Consensus 32 ~~~~~~l~~l~--~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 109 (267)
T 3kkz_A 32 EVTLKALSFID--NLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP 109 (267)
T ss_dssp HHHHHHHTTCC--CCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHHHhcc--cCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC
Confidence 33334444443 135778999999999999999998866579999999999999999875443 46999999998876
Q ss_pred ---CcccEEEeCCCChhH-HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ---GGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ---gtfD~Ii~~~~~~~~-~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++||+|++....++. ...+++++.++|+|||++++.+..
T Consensus 110 ~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 110 FRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp CCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEee
Confidence 789999998765544 889999999999999999998753
No 49
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.43 E-value=4.2e-13 Score=137.34 Aligned_cols=111 Identities=23% Similarity=0.314 Sum_probs=93.0
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ- 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~- 129 (759)
..+...+..++. ++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++. ...+++++++|+.+++
T Consensus 41 ~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 41 STIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG--EGPDLSFIKGDLSSLPF 112 (242)
T ss_dssp TTHHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT--CBTTEEEEECBTTBCSS
T ss_pred HHHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc--ccCCceEEEcchhcCCC
Confidence 345555666653 578999999999999999999977 5999999999999887764 3468999999999876
Q ss_pred --CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 130 --GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 130 --gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
++||+|++....++. ...+++++.++|+|||++++.++..
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 799999997755544 7899999999999999999998654
No 50
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.43 E-value=3.6e-12 Score=129.68 Aligned_cols=144 Identities=14% Similarity=0.099 Sum_probs=103.5
Q ss_pred CCCCeEEEECCC-cchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC----CcccEEEeCCCC
Q 004354 67 SPPPQILVPGCG-NSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ----GGLDALMEPELG 141 (759)
Q Consensus 67 ~~~~~ILDlGCG-~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~----gtfD~Ii~~~~~ 141 (759)
.++.+|||+||| +|.++..+++.+..+|+|+|+|+.+++.++++......+++++++|+..+. ++||+|+++...
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 467899999999 999999999883346999999999999999987665558999999964432 789999997432
Q ss_pred hh---------------------HHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhcccc-CCCceEEEEEeCCCCCCCC
Q 004354 142 HK---------------------LGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHAIPQKSSSEP 199 (759)
Q Consensus 142 ~~---------------------~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~-~~~w~v~~~~~~~~~~~~~ 199 (759)
.+ ....+++++.++|+|||+++++....+.....+.... ..+|.+........
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g----- 208 (230)
T 3evz_A 134 YDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVG----- 208 (230)
T ss_dssp C---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCC-----
T ss_pred cCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCC-----
Confidence 11 1478999999999999999997654433333333322 33787777666442
Q ss_pred CceEEEEEEEeCCCcc
Q 004354 200 SLQTFMVVADKENSSV 215 (759)
Q Consensus 200 ~~~~f~~v~~K~~~~~ 215 (759)
.....+++++|..+.+
T Consensus 209 ~~~~~~l~f~~~~~~~ 224 (230)
T 3evz_A 209 TRWRHSLIFFKGISEG 224 (230)
T ss_dssp C-CEEEEEEECCC---
T ss_pred CeEEEEEEEecccccc
Confidence 2445666667654433
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.43 E-value=7.6e-13 Score=128.12 Aligned_cols=135 Identities=16% Similarity=0.230 Sum_probs=101.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-CcccEEEeCCCChhH-
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-GGLDALMEPELGHKL- 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-gtfD~Ii~~~~~~~~- 144 (759)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ .+++++.++| ...+ ++||+|++....++.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~----~~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK----FDSVITLSDP-KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH----CTTSEEESSG-GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh----CCCcEEEeCC-CCCCCCceEEEEEccchhccc
Confidence 4677999999999999999998875 799999999999999887 4689999999 4444 899999998755543
Q ss_pred -HHHHHHHHHHhcccCcEEEEEEcCchh-----------hhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCC
Q 004354 145 -GNQYLSEVKRLLKSGGKFVCLTLAESH-----------VLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 212 (759)
Q Consensus 145 -~~~~l~ei~rvLkpGG~liiit~~~~~-----------~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~ 212 (759)
...+++++.++|+|||++++.++.... ....+...+. ||.+....-. ....|.+++++..
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-Gf~~~~~~~~-------~~~~~~l~~~~~~ 161 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS-NFVVEKRFNP-------TPYHFGLVLKRKT 161 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT-TEEEEEEECS-------STTEEEEEEEECC
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh-CcEEEEccCC-------CCceEEEEEecCC
Confidence 789999999999999999999865321 0112222233 6655433321 2457888888865
Q ss_pred Ccc
Q 004354 213 SSV 215 (759)
Q Consensus 213 ~~~ 215 (759)
+.+
T Consensus 162 ~~~ 164 (170)
T 3i9f_A 162 SEG 164 (170)
T ss_dssp CCS
T ss_pred CCc
Confidence 543
No 52
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=2.2e-12 Score=130.66 Aligned_cols=113 Identities=15% Similarity=0.119 Sum_probs=87.2
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC--
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-- 128 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~-- 128 (759)
.+...+...+. ....++.+|||+|||+|.++..+++.. ...|+|+|+|+.+++.|.++... ..++.++++|+...
T Consensus 42 ~l~~~~~~~l~-~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-~~~v~~~~~d~~~~~~ 119 (210)
T 1nt2_A 42 KLAAMILKGHR-LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-RNNIIPLLFDASKPWK 119 (210)
T ss_dssp HHHHHHHTSCC-CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH-CSSEEEECSCTTCGGG
T ss_pred HHHHHHHhhcc-cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc-CCCeEEEEcCCCCchh
Confidence 34444444443 334578899999999999999998863 23699999999998877766543 35789999998774
Q ss_pred --C--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 129 --Q--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 129 --~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+ ++||+|+++...+.....++++++++|||||++++..
T Consensus 120 ~~~~~~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 120 YSGIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp TTTTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hcccccceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 2 7899999985544446677999999999999999985
No 53
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.42 E-value=9.3e-13 Score=136.13 Aligned_cols=115 Identities=19% Similarity=0.200 Sum_probs=93.0
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~ 128 (759)
......+...+.. ..++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+ .+++++++|+.++
T Consensus 31 ~~~~~~~l~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 108 (257)
T 3f4k_A 31 PEATRKAVSFINE--LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNL 108 (257)
T ss_dssp HHHHHHHHTTSCC--CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHHhc--CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 3444444444422 25678999999999999999999865579999999999999998875543 3499999999887
Q ss_pred C---CcccEEEeCCCChhH-HHHHHHHHHHhcccCcEEEEEEc
Q 004354 129 Q---GGLDALMEPELGHKL-GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 129 ~---gtfD~Ii~~~~~~~~-~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+ ++||+|++....++. ...+++++.++|+|||++++.+.
T Consensus 109 ~~~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 109 PFQNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp SSCTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6 799999997755443 78999999999999999999874
No 54
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.42 E-value=1.4e-12 Score=131.02 Aligned_cols=96 Identities=25% Similarity=0.283 Sum_probs=83.7
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChh-
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHK- 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~- 143 (759)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++. ++.+.++|+.+++ ++||+|++....++
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 42 PAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLDAIDAYDAVWAHACLLHV 115 (211)
T ss_dssp CTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCCCCSCEEEEEECSCGGGS
T ss_pred CCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCCCCCcEEEEEecCchhhc
Confidence 3578999999999999999999876 5999999999999998886 5788999998877 89999999875443
Q ss_pred ---HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 144 ---LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 144 ---~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
....+++++.++|+|||++++....
T Consensus 116 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 116 PRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 4779999999999999999988653
No 55
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.42 E-value=1e-12 Score=139.13 Aligned_cols=102 Identities=14% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeecccCC---CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQ---GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~--~~~i~f~~~D~~~~~---gtfD~Ii~~~~ 140 (759)
.++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++.... .++++++++|+.+++ ++||+|++...
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 57789999999999999999987 66 6999999999999998886433 257999999999876 78999999775
Q ss_pred ChhH--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 141 GHKL--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 141 ~~~~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.++. ...+++++.++|||||++++.+...
T Consensus 160 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 160 FLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 5543 7899999999999999999997643
No 56
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.42 E-value=1.7e-12 Score=130.68 Aligned_cols=113 Identities=13% Similarity=0.055 Sum_probs=91.9
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-C-CcEEEEeecccC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTSM 128 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~-~i~f~~~D~~~~ 128 (759)
..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....+ + +++++++|+.+.
T Consensus 41 ~~~~~~~l~~l~~---~~~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 41 SPMRALTLAALAP---RRGELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG
T ss_pred HHHHHHHHHhcCC---CCCCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh
Confidence 3455556666654 5778999999999999999999854 69999999999999998875443 3 699999999883
Q ss_pred -C--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 129 -Q--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 129 -~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
. +.||+|++.... ... +++++.++|+|||++++.+....
T Consensus 117 ~~~~~~~D~v~~~~~~--~~~-~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG--SQA-LYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp GTTSCCCSEEEECSCC--CHH-HHHHHHHHSCTTCEEEEEECSHH
T ss_pred cccCCCCCEEEECCcc--cHH-HHHHHHHhcCCCcEEEEEecCcc
Confidence 3 689999987643 244 99999999999999999887654
No 57
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.42 E-value=8.5e-13 Score=133.53 Aligned_cols=105 Identities=26% Similarity=0.323 Sum_probs=89.7
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCC--Ch
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPEL--GH 142 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~--~~ 142 (759)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++......+++++++|+.+++ ++||+|++... .+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 478999999999999999998876 7999999999999999887665678999999998875 68999999765 33
Q ss_pred h--HHHHHHHHHHHhcccCcEEEEEEcCchhhh
Q 004354 143 K--LGNQYLSEVKRLLKSGGKFVCLTLAESHVL 173 (759)
Q Consensus 143 ~--~~~~~l~ei~rvLkpGG~liiit~~~~~~~ 173 (759)
+ ....+++++.++|+|||++++.....+...
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~ 149 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFTDLRELL 149 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHG
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEecChHHHH
Confidence 2 378899999999999999999987654433
No 58
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.42 E-value=4.1e-13 Score=139.07 Aligned_cols=110 Identities=11% Similarity=0.168 Sum_probs=91.3
Q ss_pred HHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---Cccc
Q 004354 58 ISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLD 133 (759)
Q Consensus 58 ~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD 133 (759)
...+......++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++.... ++++++++|+.+++ ++||
T Consensus 45 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 45 KKILSDIELNENSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEE
Confidence 33343333467889999999999999999987 55 5999999999999998887544 78999999998876 8999
Q ss_pred EEEeCCCCh----hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 134 ALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 134 ~Ii~~~~~~----~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+|++....+ .....+++++.++|+|||++++.++..
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 999976443 348899999999999999999998643
No 59
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.41 E-value=2.1e-12 Score=131.62 Aligned_cols=116 Identities=20% Similarity=0.241 Sum_probs=93.3
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
......+...+.. ..++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++..... +++++++|+.+++
T Consensus 29 ~~~~~~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~ 105 (234)
T 3dtn_A 29 DDFYGVSVSIASV--DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYD 105 (234)
T ss_dssp HHHHHHHHHTCCC--SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCC
T ss_pred HHHHHHHHHHhhc--CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccC
Confidence 3344455555542 2467899999999999999999883 2369999999999999998875443 8999999999887
Q ss_pred --CcccEEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 130 --GGLDALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 130 --gtfD~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
++||+|++....++. ...+++++.++|+|||++++.++..
T Consensus 106 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 151 (234)
T 3dtn_A 106 FEEKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVH 151 (234)
T ss_dssp CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred CCCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 899999998755443 3469999999999999999988653
No 60
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.41 E-value=7.8e-13 Score=137.57 Aligned_cols=128 Identities=17% Similarity=0.109 Sum_probs=98.1
Q ss_pred HHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHH
Q 004354 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (759)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a 107 (759)
.++|+..+.... . .|......+...+..++ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+
T Consensus 19 a~~yd~~~~~~~--~--~~~~~~~~~~~~l~~~~-----~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a 88 (263)
T 3pfg_A 19 AELYDLVHQGKG--K--DYHREAADLAALVRRHS-----PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIA 88 (263)
T ss_dssp HHHHHHHHHHTT--C--CHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhcCC--C--CHHHHHHHHHHHHHhhC-----CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHH
Confidence 567888776431 1 12222233444444443 2468999999999999999998876 599999999999999
Q ss_pred HHHhccCCCCcEEEEeecccCC--CcccEEEeCC-CChh-----HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 108 LRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPE-LGHK-----LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 108 ~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~-~~~~-----~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+++. ++++++++|+.+++ ++||+|++.. ..++ ....+++++.++|+|||++++..+..
T Consensus 89 ~~~~----~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 89 RRRN----PDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp HHHC----TTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HhhC----CCCEEEECChHHCCccCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 8875 37999999999887 8999999975 3332 36789999999999999999976543
No 61
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.41 E-value=1.5e-12 Score=137.27 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=86.9
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChh--
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHK-- 143 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~-- 143 (759)
++.+|||+|||+|.++..+++.|+ +|+|+|+|+.+++.++++......++++.++|+.+.+ ++||+|++....++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhCC
Confidence 578999999999999999999987 6999999999999999987665558999999998876 89999999875543
Q ss_pred --HHHHHHHHHHHhcccCcEEEEEEc
Q 004354 144 --LGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 144 --~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
....+++++.++|+|||+++++..
T Consensus 199 ~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 199 RERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 377999999999999999887754
No 62
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.41 E-value=9.1e-13 Score=136.81 Aligned_cols=108 Identities=13% Similarity=0.190 Sum_probs=90.0
Q ss_pred HHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC---Ccc
Q 004354 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ---GGL 132 (759)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~---gtf 132 (759)
+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++..... ++++|+++|+.+++ ++|
T Consensus 29 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 29 LMQIAAL---KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHTC---CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHhCC---CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 4444443 5778999999999999999998865 79999999999999998875433 57999999998876 799
Q ss_pred cEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 133 DALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 133 D~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
|+|++....++. ...+++++.++|+|||++++.+..
T Consensus 105 D~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 105 HIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 999998766554 789999999999999999997653
No 63
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.39 E-value=1.6e-12 Score=132.92 Aligned_cols=108 Identities=17% Similarity=0.259 Sum_probs=91.3
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---Ccc
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGL 132 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtf 132 (759)
.+..++.. .++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++... .++++.++|+.+++ ++|
T Consensus 34 ~l~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPE---VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCC---CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccc---cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhhccCCCCCc
Confidence 45566654 46789999999999999999998875799999999999999887633 47999999998876 789
Q ss_pred cEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 133 DALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 133 D~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
|+|++....++. ...+++++.++|+|||++++.+..
T Consensus 109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 109 DLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 999997755443 789999999999999999998864
No 64
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=7.8e-13 Score=139.04 Aligned_cols=105 Identities=25% Similarity=0.436 Sum_probs=89.6
Q ss_pred HHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccE
Q 004354 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDA 134 (759)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~ 134 (759)
+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++. +++++.++|+.+++ ++||+
T Consensus 49 l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~fD~ 120 (279)
T 3ccf_A 49 LLQLLNP---QPGEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY----PHLHFDVADARNFRVDKPLDA 120 (279)
T ss_dssp HHHHHCC---CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC----TTSCEEECCTTTCCCSSCEEE
T ss_pred HHHHhCC---CCCCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC----CCCEEEECChhhCCcCCCcCE
Confidence 4455543 4678999999999999999998655 6999999999999988775 67999999999887 89999
Q ss_pred EEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 135 LMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 135 Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
|++....++. ...+++++.++|+|||++++.+...
T Consensus 121 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 121 VFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 9998766653 7899999999999999999987654
No 65
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=8.1e-12 Score=127.71 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=85.3
Q ss_pred hcCCCCCCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccc----CC--Cccc
Q 004354 61 IGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS----MQ--GGLD 133 (759)
Q Consensus 61 l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~----~~--gtfD 133 (759)
+......++.+|||+|||+|.++..+++. |...|+|+|+|+.+++.+++++... +++.++++|+.+ .+ ++||
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D 145 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIVEKVD 145 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTSCCEE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccCccEE
Confidence 43333457789999999999999999987 5457999999999999998886544 789999999987 44 6899
Q ss_pred EEEeCCCChhHHHHHHHHHHHhcccCcEEEEE
Q 004354 134 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 134 ~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liii 165 (759)
+|++..........+++++.++|+|||++++.
T Consensus 146 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99965433334578899999999999999986
No 66
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.39 E-value=2e-12 Score=132.18 Aligned_cols=121 Identities=18% Similarity=0.177 Sum_probs=97.1
Q ss_pred cchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccc
Q 004354 48 AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (759)
Q Consensus 48 ~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~ 127 (759)
..+......+..++... ..++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++......++++.++|+.+
T Consensus 18 ~~~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~ 95 (246)
T 1y8c_A 18 VDYKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN 95 (246)
T ss_dssp CCHHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG
T ss_pred ccHHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc
Confidence 34455556666666541 12678999999999999999998876 59999999999999998876555589999999988
Q ss_pred CC--CcccEEEeCC-CCh-----hHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 128 MQ--GGLDALMEPE-LGH-----KLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 128 ~~--gtfD~Ii~~~-~~~-----~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++ ++||+|++.. ..+ .....+++++.++|+|||++++......
T Consensus 96 ~~~~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (246)
T 1y8c_A 96 LNINRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYY 146 (246)
T ss_dssp CCCSCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred CCccCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHH
Confidence 76 7899999976 433 3478999999999999999998766543
No 67
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=5e-13 Score=137.07 Aligned_cols=102 Identities=18% Similarity=0.125 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC--C---CcccEEEe-CCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--Q---GGLDALME-PEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~--~---gtfD~Ii~-~~~ 140 (759)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.|+++......+++++++|+.++ + ++||+|++ ...
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 36789999999999999999877776799999999999999998866667899999999876 4 78999999 221
Q ss_pred -----Ch-hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 141 -----GH-KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 141 -----~~-~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
.+ .....++++++|+|||||++++..+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred cchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 11 12567899999999999999988754
No 68
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.38 E-value=1.8e-12 Score=133.91 Aligned_cols=114 Identities=15% Similarity=0.040 Sum_probs=92.9
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~ 128 (759)
+.....+...+.. .++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++....+ .+++++++|+.++
T Consensus 22 ~~~~~~l~~~~~~---~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 22 EEKYATLGRVLRM---KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHHHTCC---CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhC
Confidence 3444555555543 6788999999999999999988732369999999999999998875443 4799999999887
Q ss_pred C--CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEc
Q 004354 129 Q--GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 129 ~--gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+ ++||+|++....++. ...+++++.++|||||++++.+.
T Consensus 99 ~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 99 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 6 889999997655543 78999999999999999998764
No 69
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.38 E-value=3e-12 Score=131.53 Aligned_cols=123 Identities=21% Similarity=0.277 Sum_probs=102.7
Q ss_pred cc-ccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CC-CeEEEEeCCHHHHHHHHHHhccCCCCcE
Q 004354 43 SF-EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMR 119 (759)
Q Consensus 43 ~~-eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~ 119 (759)
.| .|......+...+..-+..+.++|+.+|||+|||+|.++.++++. |. ..|+|+|+|+.|++.+++++. ..+++.
T Consensus 51 e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~-~~~ni~ 129 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR-DRRNIF 129 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST-TCTTEE
T ss_pred eeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH-hhcCee
Confidence 44 477766677777777666666789999999999999999999986 54 369999999999999988763 457899
Q ss_pred EEEeecccCC------CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 120 WRVMDMTSMQ------GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 120 f~~~D~~~~~------gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.+..|..+.. +.+|+|++....++....++.++.++|||||++++..
T Consensus 130 ~V~~d~~~p~~~~~~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 130 PILGDARFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEESCTTCGGGGTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccCccccccccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 9999987654 7899999877667778899999999999999998864
No 70
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.38 E-value=1.6e-12 Score=130.52 Aligned_cols=109 Identities=16% Similarity=0.205 Sum_probs=89.3
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--Cccc
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLD 133 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD 133 (759)
.+...+.. ..++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.+++ ...++++++++|+.++. ++||
T Consensus 36 ~~~~~l~~--~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~---~~~~~~~~~~~d~~~~~~~~~~D 109 (218)
T 3ou2_A 36 AALERLRA--GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR---HGLDNVEFRQQDLFDWTPDRQWD 109 (218)
T ss_dssp HHHHHHTT--TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG---GCCTTEEEEECCTTSCCCSSCEE
T ss_pred HHHHHHhc--CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh---cCCCCeEEEecccccCCCCCcee
Confidence 34444432 14567999999999999999999876 59999999999998876 23367999999998874 8999
Q ss_pred EEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 134 ALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 134 ~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+|++....++. ...+++++.++|+|||.+++.++..+
T Consensus 110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 99998755443 48999999999999999999987653
No 71
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.38 E-value=1.4e-12 Score=127.69 Aligned_cols=115 Identities=17% Similarity=0.177 Sum_probs=93.8
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc-
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS- 127 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~- 127 (759)
..+...+...+.. .++.+|||+|||+|.++..+++.+ .+|+++|+|+.+++.++++..... .++++.++|+.+
T Consensus 19 ~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 19 MEVRCLIMCLAEP---GKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA 94 (192)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH
T ss_pred HHHHHHHHHhcCC---CCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh
Confidence 3555666666654 577899999999999999999887 679999999999999988775433 478999999876
Q ss_pred CC--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 128 MQ--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 128 ~~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++ +.||+|++....+ ....+++++.++|+|||++++.+....
T Consensus 95 ~~~~~~~D~v~~~~~~~-~~~~~l~~~~~~l~~gG~l~~~~~~~~ 138 (192)
T 1l3i_A 95 LCKIPDIDIAVVGGSGG-ELQEILRIIKDKLKPGGRIIVTAILLE 138 (192)
T ss_dssp HTTSCCEEEEEESCCTT-CHHHHHHHHHHTEEEEEEEEEEECBHH
T ss_pred cccCCCCCEEEECCchH-HHHHHHHHHHHhcCCCcEEEEEecCcc
Confidence 33 6899999976533 358899999999999999999887644
No 72
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.38 E-value=9.7e-12 Score=127.21 Aligned_cols=121 Identities=16% Similarity=0.219 Sum_probs=92.0
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEe
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~ 123 (759)
|..........+...+......++.+|||+|||+|.++..|++. | ..+|+|+|+|+.+++.+.+++... ++++++++
T Consensus 55 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~ 133 (233)
T 2ipx_A 55 WNPFRSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIE 133 (233)
T ss_dssp CCTTTCHHHHHHHTTCSCCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECS
T ss_pred ecccchhHHHHHHhHHheecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEc
Confidence 54443344334443344333467889999999999999999987 3 347999999999988887766443 68999999
Q ss_pred ecccC---C---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 124 DMTSM---Q---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 124 D~~~~---~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
|+.+. + ++||+|+++....+....++.++.++|+|||++++...
T Consensus 134 d~~~~~~~~~~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 134 DARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp CTTCGGGGGGGCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccCChhhhcccCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 99873 2 78999999766545567789999999999999998654
No 73
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.38 E-value=1.2e-11 Score=131.06 Aligned_cols=124 Identities=14% Similarity=0.153 Sum_probs=94.2
Q ss_pred CCCCCeEEEECCCcchhHHH-HHHh-CCCeEEEEeCCHHHHHHHHHHhcc-CCCCcEEEEeecccCC-CcccEEEeCCCC
Q 004354 66 SSPPPQILVPGCGNSRLSEH-LYDA-GFHGITNVDFSKVVISDMLRRNVR-DRSDMRWRVMDMTSMQ-GGLDALMEPELG 141 (759)
Q Consensus 66 ~~~~~~ILDlGCG~G~ls~~-L~~~-G~~~VtgIDiS~~~I~~a~~r~~~-~~~~i~f~~~D~~~~~-gtfD~Ii~~~~~ 141 (759)
..++.+|||||||+|.++.. +++. |. +|+|+|+|+.+++.|++++.. ...+++|+++|+.+++ ++||+|++...
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~- 197 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL- 197 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT-
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC-
Confidence 37889999999999987644 4443 54 599999999999999998754 2368999999999887 89999998654
Q ss_pred hhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhcc----ccCCCceEEEEEeCC
Q 004354 142 HKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFP----KFRFGWKMSVHAIPQ 193 (759)
Q Consensus 142 ~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~----~~~~~w~v~~~~~~~ 193 (759)
.....++++++.|+|||||++++...... +..++. ....+|.......+.
T Consensus 198 ~~d~~~~l~el~r~LkPGG~Lvv~~~~~~--r~~l~~~v~~~~~~gf~~~~~~~p~ 251 (298)
T 3fpf_A 198 AEPKRRVFRNIHRYVDTETRIIYRTYTGM--RAILYAPVSDDDITGFRRAGVVLPS 251 (298)
T ss_dssp CSCHHHHHHHHHHHCCTTCEEEEEECCGG--GGGSSCCCCTGGGTTEEEEEEECCC
T ss_pred ccCHHHHHHHHHHHcCCCcEEEEEcCcch--hhhccccCChhhhhhhhheeEECCC
Confidence 23467999999999999999999875321 111111 123388887776665
No 74
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.37 E-value=3.5e-12 Score=128.76 Aligned_cols=111 Identities=20% Similarity=0.185 Sum_probs=88.4
Q ss_pred HHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC------CCcEEEEeecc
Q 004354 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR------SDMRWRVMDMT 126 (759)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~------~~i~f~~~D~~ 126 (759)
...+..++.. .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.+++++.... .+++++++|+.
T Consensus 18 ~~~l~~~l~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 18 MNGVVAALKQ---SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHH---TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT
T ss_pred HHHHHHHHHh---cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc
Confidence 3344455543 4678999999999999999998754 579999999999999998875332 27999999997
Q ss_pred cCC---CcccEEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEc
Q 004354 127 SMQ---GGLDALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 127 ~~~---gtfD~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~ 167 (759)
..+ ++||+|++....++. ...+++++.++|+|||.+++...
T Consensus 95 ~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 95 YQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 666 789999998755433 58999999999999997666554
No 75
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.37 E-value=6.6e-13 Score=142.06 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=82.9
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCC-------CcEEEEeec------ccC----C-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS-------DMRWRVMDM------TSM----Q- 129 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~-------~i~f~~~D~------~~~----~- 129 (759)
++.+|||||||+|..+..++..+..+|+|+|+|+.||+.|++++..... +++|.+.|+ .++ +
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4689999999999877777777666799999999999999998743322 267888888 222 2
Q ss_pred CcccEEEeCCCChh-----HHHHHHHHHHHhcccCcEEEEEEcCchhh
Q 004354 130 GGLDALMEPELGHK-----LGNQYLSEVKRLLKSGGKFVCLTLAESHV 172 (759)
Q Consensus 130 gtfD~Ii~~~~~~~-----~~~~~l~ei~rvLkpGG~liiit~~~~~~ 172 (759)
++||+|+|....|. ....++++++++|||||+|++.+......
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~ 175 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKL 175 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHH
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHH
Confidence 79999999764432 25799999999999999999998765443
No 76
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.37 E-value=1.7e-12 Score=136.97 Aligned_cols=108 Identities=20% Similarity=0.215 Sum_probs=90.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC----CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ----GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~----gtfD~Ii~~~~ 140 (759)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++..... .+++++++|+.+.+ ++||+|++...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 4678999999999999999988887679999999999999998875433 35899999998764 78999999765
Q ss_pred Chh------HHHHHHHHHHHhcccCcEEEEEEcCchhhhh
Q 004354 141 GHK------LGNQYLSEVKRLLKSGGKFVCLTLAESHVLG 174 (759)
Q Consensus 141 ~~~------~~~~~l~ei~rvLkpGG~liiit~~~~~~~~ 174 (759)
.++ ....+++++.++|+|||++++.+........
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 182 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILE 182 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHH
Confidence 433 3789999999999999999999877654443
No 77
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.37 E-value=3.1e-12 Score=132.31 Aligned_cols=98 Identities=18% Similarity=0.266 Sum_probs=86.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.....+++++.++|+.+++ ++||+|++....++
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 4678999999999999999998865 5999999999999999887444578999999998876 78999999876655
Q ss_pred H--HHHHHHHHHHhcccCcEEEEE
Q 004354 144 L--GNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 144 ~--~~~~l~ei~rvLkpGG~liii 165 (759)
. ...+++++.++|+|||++++.
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHCCCCcEEEEE
Confidence 4 789999999999999999887
No 78
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.37 E-value=1.8e-12 Score=132.99 Aligned_cols=127 Identities=17% Similarity=0.103 Sum_probs=94.8
Q ss_pred CCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHH
Q 004354 26 TSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVIS 105 (759)
Q Consensus 26 ~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~ 105 (759)
...+||..+.... ......+...+..++.. ..++.+|||||||+|.++..+++.|.. |+|+|+|+.+++
T Consensus 9 ~~~~~y~~~~~~~--------~~~~~~~~~~~~~~l~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~-v~gvD~s~~~~~ 77 (240)
T 3dli_A 9 HTSDYYFLFEEKF--------RGSRELVKARLRRYIPY--FKGCRRVLDIGCGRGEFLELCKEEGIE-SIGVDINEDMIK 77 (240)
T ss_dssp ---CHHHHHHHHH--------TCCHHHHHHHHGGGGGG--TTTCSCEEEETCTTTHHHHHHHHHTCC-EEEECSCHHHHH
T ss_pred chHHHHHHHHHHh--------CCCHHHHHHHHHHHHhh--hcCCCeEEEEeCCCCHHHHHHHhCCCc-EEEEECCHHHHH
Confidence 3455666655432 22333444445555442 145689999999999999999998875 999999999998
Q ss_pred HHHHHhccCCCCcEEEEeecccC----C-CcccEEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 106 DMLRRNVRDRSDMRWRVMDMTSM----Q-GGLDALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 106 ~a~~r~~~~~~~i~f~~~D~~~~----~-gtfD~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
.++++ ++++++|+.+. + ++||+|++....++. ...+++++.++|||||++++.+....
T Consensus 78 ~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 78 FCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp HHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred HHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 87654 78999998774 2 899999997755443 58999999999999999999887654
No 79
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.37 E-value=2.3e-12 Score=128.69 Aligned_cols=103 Identities=14% Similarity=0.168 Sum_probs=85.6
Q ss_pred CCCCeEEEECCCcchhH-HHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLS-EHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls-~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~ 142 (759)
.++.+|||+|||+|.++ ..+...|. +|+|+|+|+.+++.++++......++++.++|+.+++ ++||+|++....+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 45789999999999984 45555565 6999999999999999887555568999999998876 7899999976433
Q ss_pred ----hHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 143 ----KLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 143 ----~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
.....+++++.++|+|||++++.++..+
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 3488999999999999999999987654
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.36 E-value=4.1e-12 Score=123.59 Aligned_cols=131 Identities=9% Similarity=0.102 Sum_probs=99.4
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~ 129 (759)
..+...+...+.. .++.+|||+|||+|.++..+++ +..+++|+|+|+.+++.++++..... ++++++++|+.+..
T Consensus 21 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~ 96 (183)
T 2yxd_A 21 EEIRAVSIGKLNL---NKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL 96 (183)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG
T ss_pred HHHHHHHHHHcCC---CCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc
Confidence 3455566666654 5678999999999999999988 45579999999999999998875443 57999999987632
Q ss_pred --CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhcccc-CCCceEEEEE
Q 004354 130 --GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGWKMSVHA 190 (759)
Q Consensus 130 --gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~-~~~w~v~~~~ 190 (759)
+.||+|++... .....+++++.++ |||.+++.+........ +.... ..+|.++...
T Consensus 97 ~~~~~D~i~~~~~--~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~-~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 97 DKLEFNKAFIGGT--KNIEKIIEILDKK--KINHIVANTIVLENAAK-IINEFESRGYNVDAVN 155 (183)
T ss_dssp GGCCCSEEEECSC--SCHHHHHHHHHHT--TCCEEEEEESCHHHHHH-HHHHHHHTTCEEEEEE
T ss_pred cCCCCcEEEECCc--ccHHHHHHHHhhC--CCCEEEEEecccccHHH-HHHHHHHcCCeEEEEE
Confidence 68999999876 4578899999999 99999999876543322 22222 2357776654
No 81
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.36 E-value=9.1e-13 Score=135.71 Aligned_cols=100 Identities=17% Similarity=0.125 Sum_probs=83.6
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-----CcccEEEeCCC-
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-----GGLDALMEPEL- 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-----gtfD~Ii~~~~- 140 (759)
.++.+|||||||+|..+..+++.+..+||+||+|+.+++.|+++......++.++.+|+.+.. ++||.|+....
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 368899999999999999998876667999999999999999998777778899999876543 78999986431
Q ss_pred -----Ch-hHHHHHHHHHHHhcccCcEEEEEE
Q 004354 141 -----GH-KLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 141 -----~~-~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.+ .....+++++.|+|||||+|++..
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 11 237889999999999999998754
No 82
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.36 E-value=3.6e-12 Score=127.84 Aligned_cols=96 Identities=20% Similarity=0.262 Sum_probs=84.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChhH
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHKL 144 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~~ 144 (759)
++.+|||+|||+|.++..+ ++.+|+|+|+|+.+++.++++. ++++++++|+.+++ ++||+|++....++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 6789999999999999887 6656999999999999998875 67899999998876 789999998765543
Q ss_pred --HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 145 --GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 145 --~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
...+++++.++|+|||++++.++...
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 78999999999999999999987654
No 83
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.36 E-value=2.8e-12 Score=131.72 Aligned_cols=110 Identities=16% Similarity=0.186 Sum_probs=91.6
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC---Cc
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ---GG 131 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~---gt 131 (759)
.+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.... .+++++.++|+.+++ ++
T Consensus 12 ~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 87 (239)
T 1xxl_A 12 LMIKTAEC---RAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDS 87 (239)
T ss_dssp HHHHHHTC---CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTC
T ss_pred hHHHHhCc---CCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCc
Confidence 34445544 6788999999999999999998865 6999999999999998876443 357999999998876 78
Q ss_pred ccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 132 LDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 132 fD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
||+|++....++. ...+++++.++|+|||++++.+...
T Consensus 88 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 88 FDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 9999998755443 7899999999999999999987643
No 84
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.35 E-value=7.4e-12 Score=125.18 Aligned_cols=102 Identities=13% Similarity=0.179 Sum_probs=87.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC-CcccEEEeCCCChhH
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-GGLDALMEPELGHKL 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~-gtfD~Ii~~~~~~~~ 144 (759)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++..... .++++.++|+.+.. ++||+|+++...+ .
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~-~ 137 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAE-I 137 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHH-H
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHH-H
Confidence 3678999999999999999998877789999999999999998875443 34999999998876 8999999976443 3
Q ss_pred HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 145 GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 145 ~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
...+++++.++|+|||++++.++..
T Consensus 138 ~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 138 LLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp HHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHhcCCCCEEEEEecCc
Confidence 6889999999999999999986654
No 85
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.34 E-value=3.2e-12 Score=126.38 Aligned_cols=102 Identities=12% Similarity=0.022 Sum_probs=87.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC-----CcccEEEeCCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-----GGLDALMEPELG 141 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~-----gtfD~Ii~~~~~ 141 (759)
++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.+++++.... .+++++++|+.+.. ++||+|+++...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 578999999999999998888888789999999999999998875433 57999999998753 789999997644
Q ss_pred hh---HHHHHHHHHHH--hcccCcEEEEEEcCc
Q 004354 142 HK---LGNQYLSEVKR--LLKSGGKFVCLTLAE 169 (759)
Q Consensus 142 ~~---~~~~~l~ei~r--vLkpGG~liiit~~~ 169 (759)
++ ....++.++.+ +|+|||++++.+...
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 43 48899999999 999999999987543
No 86
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.34 E-value=7.2e-12 Score=133.28 Aligned_cols=110 Identities=11% Similarity=0.120 Sum_probs=91.1
Q ss_pred hhcCCCCCCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCCCcccEEE
Q 004354 60 LIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQGGLDALM 136 (759)
Q Consensus 60 ~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~gtfD~Ii 136 (759)
.+......++.+|||||||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .++++.++|+.++.++||+|+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~ 142 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIV 142 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEE
T ss_pred HHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEE
Confidence 333333467889999999999999999988 74 69999999999999999875433 369999999988888999999
Q ss_pred eCCCChh-----------HHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 137 EPELGHK-----------LGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 137 ~~~~~~~-----------~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+....++ ....+++++.++|||||++++.++..+
T Consensus 143 ~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 143 SLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp EESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred EcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 9764333 257999999999999999999887643
No 87
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.34 E-value=1.5e-12 Score=135.65 Aligned_cols=112 Identities=18% Similarity=0.251 Sum_probs=92.3
Q ss_pred chhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC
Q 004354 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM 128 (759)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~ 128 (759)
.+..+...+...+.. .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ ++++|+++|+.++
T Consensus 18 ~~~~~~~~l~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-----~~~~~~~~d~~~~ 88 (261)
T 3ege_A 18 PDIRIVNAIINLLNL---PKGSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVH-----PQVEWFTGYAENL 88 (261)
T ss_dssp CCHHHHHHHHHHHCC---CTTCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCC-----TTEEEECCCTTSC
T ss_pred ccHHHHHHHHHHhCC---CCCCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhc-----cCCEEEECchhhC
Confidence 344566667777754 5778999999999999999998765 699999999888765433 3899999999887
Q ss_pred C---CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 129 Q---GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 129 ~---gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+ ++||+|++....++. ...+++++.++|| ||++++.++..+
T Consensus 89 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~ 134 (261)
T 3ege_A 89 ALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIR 134 (261)
T ss_dssp CSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGG
T ss_pred CCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCc
Confidence 6 799999998765543 8899999999999 999999987654
No 88
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.34 E-value=1.1e-11 Score=121.46 Aligned_cols=114 Identities=17% Similarity=0.162 Sum_probs=93.2
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CC--cEEEEeecccC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SD--MRWRVMDMTSM 128 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~--i~f~~~D~~~~ 128 (759)
.....+...+.. .++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++..... .+ +++.++|+.+.
T Consensus 39 ~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~ 114 (194)
T 1dus_A 39 KGTKILVENVVV---DKDDDILDLGCGYGVIGIALADEV-KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN 114 (194)
T ss_dssp HHHHHHHHHCCC---CTTCEEEEETCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT
T ss_pred hHHHHHHHHccc---CCCCeEEEeCCCCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc
Confidence 344556666654 577899999999999999998884 469999999999999998875433 34 99999999875
Q ss_pred C--CcccEEEeCCCChh---HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 129 Q--GGLDALMEPELGHK---LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 129 ~--gtfD~Ii~~~~~~~---~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
. ++||+|+++...++ ....+++++.++|+|||.+++.+...
T Consensus 115 ~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 115 VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 4 78999999775443 37899999999999999999998764
No 89
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.34 E-value=3.5e-12 Score=134.38 Aligned_cols=102 Identities=13% Similarity=0.188 Sum_probs=88.3
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC----CcccEEEeCCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ----GGLDALMEPELG 141 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~----gtfD~Ii~~~~~ 141 (759)
++.+|||||||+|.++..+++.|. +|+|+|+|+.+++.++++....+ ++++++++|+.+++ ++||+|++....
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999876 59999999999999998875543 57999999998876 899999998765
Q ss_pred hhH--HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 142 HKL--GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 142 ~~~--~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++. ...+++++.++|+|||++++.++...
T Consensus 147 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 147 EWVADPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp GGCSCHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred hcccCHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 543 78999999999999999999987654
No 90
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.34 E-value=3.9e-12 Score=133.09 Aligned_cols=101 Identities=19% Similarity=0.321 Sum_probs=87.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC---CcccEEEeCCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ---GGLDALMEPELG 141 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~---gtfD~Ii~~~~~ 141 (759)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.++++..... +++++.+.|+.+++ ++||+|++....
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 578899999999999999999884 2469999999999999998875433 57999999999876 899999998765
Q ss_pred hhH--HHHHHHHHHHhcccCcEEEEEEc
Q 004354 142 HKL--GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 142 ~~~--~~~~l~ei~rvLkpGG~liiit~ 167 (759)
++. ...+++++.++|+|||++++.+.
T Consensus 116 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 116 EHLQSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 543 67999999999999999999864
No 91
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.34 E-value=4.8e-12 Score=128.99 Aligned_cols=128 Identities=18% Similarity=0.204 Sum_probs=97.4
Q ss_pred HHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHH
Q 004354 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDM 107 (759)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a 107 (759)
.++|+..+.... . .|......+...+..++ .++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+
T Consensus 9 a~~yd~~~~~~~--~--~~~~~~~~~~~~l~~~~-----~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a 78 (239)
T 3bxo_A 9 ADVYDLFYLGRG--K--DYAAEASDIADLVRSRT-----PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHA 78 (239)
T ss_dssp HHHHHHHHHHHT--C--CHHHHHHHHHHHHHHHC-----TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHH
T ss_pred HHHHHHHhhccH--h--hHHHHHHHHHHHHHHhc-----CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHH
Confidence 678888886541 1 12222223344444444 3568999999999999999998866 699999999999999
Q ss_pred HHHhccCCCCcEEEEeecccCC--CcccEEEeCC-CCh-----hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 108 LRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPE-LGH-----KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 108 ~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~-~~~-----~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+++. +++++.++|+.+++ ++||+|+|.. ..+ .....+++++.++|+|||++++.++..
T Consensus 79 ~~~~----~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 79 RKRL----PDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHC----TTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHhC----CCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 8775 56899999998876 7899999643 222 337899999999999999999886544
No 92
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.34 E-value=3.1e-12 Score=133.81 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=81.2
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeec---ccCC
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM---TSMQ 129 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~---~~~~ 129 (759)
....+...+.. .++.+|||+|||+|.++..|++.|. +|+|+|+|+.|++.++++.........+...+. ....
T Consensus 33 ~~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~ 108 (261)
T 3iv6_A 33 DRENDIFLENI---VPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELA 108 (261)
T ss_dssp HHHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGT
T ss_pred HHHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccC
Confidence 33444555543 6788999999999999999999987 599999999999999988754422223332222 1112
Q ss_pred CcccEEEeCCCChh----HHHHHHHHHHHhcccCcEEEEEE
Q 004354 130 GGLDALMEPELGHK----LGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 130 gtfD~Ii~~~~~~~----~~~~~l~ei~rvLkpGG~liiit 166 (759)
++||+|+++...++ ....+++++.++| |||++++..
T Consensus 109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 78999999775443 3678999999999 999998775
No 93
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.33 E-value=4.7e-12 Score=130.83 Aligned_cols=97 Identities=20% Similarity=0.182 Sum_probs=85.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~ 142 (759)
.++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.++++ .+++++.++|+.+++ ++||+|++....+
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 106 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVN-VITGIDSDDDMLEKAADR----LPNTNFGKADLATWKPAQKADLLYANAVFQ 106 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTT-SEEEEESCHHHHHHHHHH----STTSEEEECCTTTCCCSSCEEEEEEESCGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHh----CCCcEEEECChhhcCccCCcCEEEEeCchh
Confidence 57789999999999999999887 44 599999999999998877 367999999998876 7899999987666
Q ss_pred hH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 143 KL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 143 ~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+. ...+++++.++|+|||++++.+..
T Consensus 107 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 107 WVPDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp GSTTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred hCCCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 54 789999999999999999998864
No 94
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=1e-11 Score=130.85 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=90.9
Q ss_pred HhhcCCCCCCCCeEEEECCCcchhHHHHHH-hCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCCCcccEE
Q 004354 59 SLIGAPTSSPPPQILVPGCGNSRLSEHLYD-AGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQGGLDAL 135 (759)
Q Consensus 59 ~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~-~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~gtfD~I 135 (759)
..+......++.+|||||||+|.++..+++ .|. +|+|+|+|+.+++.++++....+ .++++.++|+.+++++||+|
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v 133 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRI 133 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEE
T ss_pred HHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEE
Confidence 334433446788999999999999999984 466 69999999999999998875433 47999999998888899999
Q ss_pred EeCCCChh----HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 136 MEPELGHK----LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 136 i~~~~~~~----~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
++....++ ....+++++.++|||||++++.++..
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 99765443 37899999999999999999988654
No 95
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.33 E-value=1.2e-13 Score=141.81 Aligned_cols=147 Identities=10% Similarity=0.119 Sum_probs=100.7
Q ss_pred ccccccc-cCCCCHHHHHHHHhhcCCC-Ccc-----ccccchh-hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHH
Q 004354 16 TDLLQTL-GDFTSKENWDKFFTIRGIG-DSF-----EWYAEWP-QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLY 87 (759)
Q Consensus 16 ~~lP~~~-~~f~~~~yWd~~y~~~~~~-~~~-----eW~~~~~-~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~ 87 (759)
..+|..+ .+.....||++.+...... ..+ .|+...+ .+...+...+.. ..++.+|||+|||+|.++..++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~vLD~gcG~G~~~~~la 97 (241)
T 3gdh_A 20 NGLPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQ--SFKCDVVVDAFCGVGGNTIQFA 97 (241)
T ss_dssp --CCHHHHHCGGGHHHHHTHHHHCTTGGGTCCCCHHHHHHCCCHHHHHHHHHHHHH--HSCCSEEEETTCTTSHHHHHHH
T ss_pred CCCChhhhccHHHHHHHHhhhhhHhhccCCceecccceeecCHHHHHHHHHHHhhh--ccCCCEEEECccccCHHHHHHH
Confidence 3444433 2344678999887655210 011 1332222 223333333321 0257899999999999999999
Q ss_pred HhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCCChhH--HHHHHHHHHHhcccCcE
Q 004354 88 DAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGK 161 (759)
Q Consensus 88 ~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~ 161 (759)
+.| .+|+|+|+|+.+++.+++++.... .+++|+++|+.++. ++||+|+++...++. ....+.+++++|+|||.
T Consensus 98 ~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~ 176 (241)
T 3gdh_A 98 LTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGF 176 (241)
T ss_dssp HTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHH
T ss_pred HcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcce
Confidence 987 569999999999999998876554 47999999998876 799999997644332 34467789999999999
Q ss_pred EEEE
Q 004354 162 FVCL 165 (759)
Q Consensus 162 liii 165 (759)
+++.
T Consensus 177 ~i~~ 180 (241)
T 3gdh_A 177 EIFR 180 (241)
T ss_dssp HHHH
T ss_pred eHHH
Confidence 6544
No 96
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.33 E-value=9.9e-12 Score=125.16 Aligned_cols=96 Identities=22% Similarity=0.275 Sum_probs=82.1
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC---C----CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM---Q----GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~---~----gtfD~Ii~~~~ 140 (759)
++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++ .++.+.+.|+.++ + ++||+|++...
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECch
Confidence 568999999999999999999877 599999999999988776 5678899988777 2 56999999765
Q ss_pred Ch-hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 141 GH-KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 141 ~~-~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.+ .....+++++.++|+|||++++.++..
T Consensus 126 l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 126 LLHQDIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCSSCCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hhhhhHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 44 237899999999999999999998643
No 97
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.33 E-value=8.5e-12 Score=127.46 Aligned_cols=114 Identities=21% Similarity=0.284 Sum_probs=92.7
Q ss_pred hhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
+......+..++. ++.+|||+|||+|.++..+++. .+|+|+|+|+.+++.++++......++++.++|+.+++
T Consensus 20 ~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 20 YPEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcC
Confidence 3445555666664 4689999999999999999877 46999999999999999887655578999999998876
Q ss_pred --CcccEEEeCC-CCh-----hHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 130 --GGLDALMEPE-LGH-----KLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 130 --gtfD~Ii~~~-~~~-----~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++||+|++.. ..+ .....+++++.++|+|||++++......
T Consensus 93 ~~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 141 (243)
T 3d2l_A 93 LPEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPY 141 (243)
T ss_dssp CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred CCCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHH
Confidence 7899999864 222 3378899999999999999998766543
No 98
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.33 E-value=6e-12 Score=132.90 Aligned_cols=136 Identities=10% Similarity=0.082 Sum_probs=102.7
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEe
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVM 123 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~ 123 (759)
|+......+..+..++ .++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.|++++...+ ..++++++
T Consensus 108 f~~~~~~~~~~l~~~~-----~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~ 182 (278)
T 2frn_A 108 FSPANVKERVRMAKVA-----KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCGGGHHHHHHHHHHC-----CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred EcCCcHHHHHHHHHhC-----CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC
Confidence 5555445555566665 3578999999999999999999887679999999999999998875433 34899999
Q ss_pred ecccCC--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCch-----hhhhhhcccc-CCCceEEE
Q 004354 124 DMTSMQ--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES-----HVLGLLFPKF-RFGWKMSV 188 (759)
Q Consensus 124 D~~~~~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~-----~~~~~l~~~~-~~~w~v~~ 188 (759)
|+.++. ++||+|+++.... ...++.++.++|+|||++++.++... .....+.... ..+|.+..
T Consensus 183 D~~~~~~~~~fD~Vi~~~p~~--~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 183 DNRDFPGENIADRILMGYVVR--THEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CTTTCCCCSCEEEEEECCCSS--GGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CHHHhcccCCccEEEECCchh--HHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 999886 7899999965422 36789999999999999999988742 2222222222 33777766
No 99
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.33 E-value=7.4e-12 Score=130.64 Aligned_cols=102 Identities=20% Similarity=0.311 Sum_probs=87.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---CcccEEEeCCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ---GGLDALMEPELG 141 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~---gtfD~Ii~~~~~ 141 (759)
.++.+|||+|||+|.++..+++....+|+|+|+|+.+++.++++..... .+++++++|+.+++ ++||+|++....
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 139 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESL 139 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechh
Confidence 6788999999999999999988633469999999999999988875433 36999999998876 789999997765
Q ss_pred hhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 142 HKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 142 ~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++. ...+++++.++|+|||++++.++.
T Consensus 140 ~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 140 HHMPDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp TTSSCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred hhCCCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 544 789999999999999999998864
No 100
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.32 E-value=1e-11 Score=132.90 Aligned_cols=111 Identities=9% Similarity=0.087 Sum_probs=92.2
Q ss_pred HhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCCCcccEE
Q 004354 59 SLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQGGLDAL 135 (759)
Q Consensus 59 ~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~gtfD~I 135 (759)
..+......++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .++++.++|+.+++++||+|
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v 159 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRI 159 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEE
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEE
Confidence 3344334467889999999999999999987 77 59999999999999998875433 46999999998888899999
Q ss_pred EeCCCChh----HHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 136 MEPELGHK----LGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 136 i~~~~~~~----~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++....++ ....+++++.++|+|||++++.++..+
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 198 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSY 198 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECC
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccC
Confidence 99764433 378999999999999999999887643
No 101
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.32 E-value=6.4e-12 Score=134.46 Aligned_cols=103 Identities=25% Similarity=0.301 Sum_probs=88.8
Q ss_pred CCCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---CcccEEEeCC
Q 004354 66 SSPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ---GGLDALMEPE 139 (759)
Q Consensus 66 ~~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~---gtfD~Ii~~~ 139 (759)
..++.+|||+|||+|.++..+++. |. +|+|+|+|+.+++.++++....+ .+++++++|+.+++ ++||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 367789999999999999999987 65 59999999999999998875543 46999999999876 7999999977
Q ss_pred CChhH-HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 140 LGHKL-GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 140 ~~~~~-~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
..++. ...+++++.++|||||++++.+...
T Consensus 194 ~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 194 STMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp CGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred chhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 54443 8999999999999999999988543
No 102
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.32 E-value=5.5e-12 Score=133.18 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=88.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~ 142 (759)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++......+++|+++|+.+++ ++||+|++....+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFLL 100 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChhh
Confidence 567899999999999999998872 246999999999999999987665668999999999877 8899999987554
Q ss_pred hH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 143 KL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 143 ~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+. ...+++++.++|+|||++++....
T Consensus 101 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 HMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 43 789999999999999999998764
No 103
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.32 E-value=7.7e-12 Score=130.11 Aligned_cols=109 Identities=19% Similarity=0.231 Sum_probs=88.1
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ- 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~- 129 (759)
..+...+..++. ++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++.. . .+.++|+.+++
T Consensus 42 ~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~~~~ 110 (260)
T 2avn_A 42 RLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV---K--NVVEAKAEDLPF 110 (260)
T ss_dssp HHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC---S--CEEECCTTSCCS
T ss_pred HHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC---C--CEEECcHHHCCC
Confidence 344455555542 567999999999999999998876 59999999999999988763 1 28999998876
Q ss_pred --CcccEEEeCCCChhH---HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 130 --GGLDALMEPELGHKL---GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 130 --gtfD~Ii~~~~~~~~---~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++||+|++.....+. ...+++++.++|+|||++++.+....
T Consensus 111 ~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 156 (260)
T 2avn_A 111 PSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFY 156 (260)
T ss_dssp CTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHH
T ss_pred CCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChH
Confidence 789999997633222 78999999999999999999887643
No 104
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.32 E-value=7.5e-12 Score=121.61 Aligned_cols=113 Identities=12% Similarity=0.113 Sum_probs=88.7
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC-C-CcEEEEeeccc-
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-S-DMRWRVMDMTS- 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~-~-~i~f~~~D~~~- 127 (759)
.+...+...+.. .++.+|||+|||+|.++..+++.. ..+|+++|+|+.+++.++++..... + ++ +++.|+.+
T Consensus 12 ~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~ 87 (178)
T 3hm2_A 12 HVRALAISALAP---KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA 87 (178)
T ss_dssp HHHHHHHHHHCC---CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG
T ss_pred HHHHHHHHHhcc---cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh
Confidence 444555555554 567899999999999999998872 3469999999999999998875433 3 57 88888744
Q ss_pred CC---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 128 MQ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 128 ~~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++ ++||+|++....++ ..+++++.++|+|||++++.+...+
T Consensus 88 ~~~~~~~~D~i~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~~~ 131 (178)
T 3hm2_A 88 FDDVPDNPDVIFIGGGLTA--PGVFAAAWKRLPVGGRLVANAVTVE 131 (178)
T ss_dssp GGGCCSCCSEEEECC-TTC--TTHHHHHHHTCCTTCEEEEEECSHH
T ss_pred hhccCCCCCEEEECCcccH--HHHHHHHHHhcCCCCEEEEEeeccc
Confidence 22 68999999876554 7899999999999999999887643
No 105
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.31 E-value=5.1e-12 Score=133.55 Aligned_cols=143 Identities=17% Similarity=0.120 Sum_probs=93.6
Q ss_pred ccCCCCHHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCH
Q 004354 22 LGDFTSKENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (759)
Q Consensus 22 ~~~f~~~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~ 101 (759)
...|....||+.+|.... .....-..........+..++.. ...++.+|||||||+|.++..++..+..+|+|+|+|+
T Consensus 27 y~~~~~~~y~~~~y~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~ 104 (289)
T 2g72_A 27 YQRFEPRAYLRNNYAPPR-GDLCNPNGVGPWKLRCLAQTFAT-GEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLE 104 (289)
T ss_dssp GGGCCHHHHHHHHHSTTT-TCCSSTTSHHHHHHHHHHHHHHT-SCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCH
T ss_pred HhccCHHHHHHHHhcCcc-cchhhhhHHHHHHHHHHHHHhCC-CCCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCH
Confidence 334666678888886542 11000000011112334444432 1125679999999999965544443345799999999
Q ss_pred HHHHHHHHHhccCCC-------------------------------CcEEEEeeccc-CC--------CcccEEEeCCCC
Q 004354 102 VVISDMLRRNVRDRS-------------------------------DMRWRVMDMTS-MQ--------GGLDALMEPELG 141 (759)
Q Consensus 102 ~~I~~a~~r~~~~~~-------------------------------~i~f~~~D~~~-~~--------gtfD~Ii~~~~~ 141 (759)
.|++.+++++..... .++++++|+.+ ++ ++||+|++....
T Consensus 105 ~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l 184 (289)
T 2g72_A 105 VNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCL 184 (289)
T ss_dssp HHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCH
T ss_pred HHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhh
Confidence 999999886532110 14577779877 32 569999998866
Q ss_pred hh------HHHHHHHHHHHhcccCcEEEEEE
Q 004354 142 HK------LGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 142 ~~------~~~~~l~ei~rvLkpGG~liiit 166 (759)
++ ....+++++.++|||||+|++..
T Consensus 185 ~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 185 EAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 65 38899999999999999999874
No 106
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.30 E-value=2e-11 Score=124.09 Aligned_cols=121 Identities=17% Similarity=0.229 Sum_probs=94.5
Q ss_pred ccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEE
Q 004354 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRV 122 (759)
Q Consensus 45 eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~ 122 (759)
.|...+..+...+...+......++.+|||+|||+|.++..+++. |. .+|+|+|+|+.+++.+++++... +++++++
T Consensus 50 ~~~p~~~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~ 128 (227)
T 1g8a_A 50 IWNPNRSKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPIL 128 (227)
T ss_dssp ECCTTTCHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEE
T ss_pred EeCCCchhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEE
Confidence 356655555555544454333467889999999999999999976 42 47999999999999998887544 7899999
Q ss_pred eecccC------CCcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 123 MDMTSM------QGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 123 ~D~~~~------~gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+|+.+. .++||+|++.....+....++.++.++|+|||++++..
T Consensus 129 ~d~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 129 GDATKPEEYRALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp CCTTCGGGGTTTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCcchhhcccCCceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 999873 16899999976544445677999999999999999873
No 107
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.29 E-value=4.2e-11 Score=119.57 Aligned_cols=98 Identities=12% Similarity=0.034 Sum_probs=82.7
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC--CcccEEEeCCCChh
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--GGLDALMEPELGHK 143 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~ 143 (759)
++.+|||+|||+|.++..++.. +..+++++|+|+.+++.++++..... .++++.++|+.+.. ++||+|++....
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~~-- 142 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFA-- 142 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCSS--
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEeccC--
Confidence 3679999999999999999886 23479999999999999988875433 45999999998876 789999987542
Q ss_pred HHHHHHHHHHHhcccCcEEEEEEc
Q 004354 144 LGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 144 ~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
....+++++.++|+|||++++...
T Consensus 143 ~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 143 SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 367899999999999999998864
No 108
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.29 E-value=4e-11 Score=130.85 Aligned_cols=147 Identities=18% Similarity=0.219 Sum_probs=110.0
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ 129 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~ 129 (759)
+...+...... .++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++...+ .+++|.++|+.+++
T Consensus 191 la~~l~~~~~~---~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~ 267 (354)
T 3tma_A 191 LAQALLRLADA---RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHTTC---CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGG
T ss_pred HHHHHHHHhCC---CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCc
Confidence 44445555543 567899999999999999999864 2459999999999999999875544 37999999999876
Q ss_pred ---CcccEEEeCCCCh----------hHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhccccCCCceEEEEEeCCCCC
Q 004354 130 ---GGLDALMEPELGH----------KLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSS 196 (759)
Q Consensus 130 ---gtfD~Ii~~~~~~----------~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~~~~w~v~~~~~~~~~~ 196 (759)
+.||+|+++.... .....+++++.++|+|||++++++..... ...+.. .+|.........
T Consensus 268 ~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~-~~~~~~---~g~~~~~~~~l~--- 340 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPAL-LKRALP---PGFALRHARVVE--- 340 (354)
T ss_dssp GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHH-HHHHCC---TTEEEEEEEECC---
T ss_pred cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHH-HHHHhh---cCcEEEEEEEEE---
Confidence 6789999965211 11478999999999999999999876543 333333 477765544433
Q ss_pred CCCCceEEEEEEEe
Q 004354 197 SEPSLQTFMVVADK 210 (759)
Q Consensus 197 ~~~~~~~f~~v~~K 210 (759)
...+..++|+++|
T Consensus 341 -~g~l~~~i~vl~r 353 (354)
T 3tma_A 341 -QGGVYPRVFVLEK 353 (354)
T ss_dssp -BTTBCCEEEEEEE
T ss_pred -eCCEEEEEEEEEc
Confidence 3457788888876
No 109
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.29 E-value=4.8e-11 Score=122.64 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=91.6
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEe
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVM 123 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~ 123 (759)
|......+...+...+......++.+|||+|||+|..+..+++. | -..|+|+|+|+.+++.+.+.+.. ..++.++++
T Consensus 54 w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~ 132 (232)
T 3id6_C 54 WNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLA 132 (232)
T ss_dssp CCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEEC
T ss_pred hchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEc
Confidence 54444456666666665445678999999999999999999875 3 23699999999998766554432 368999999
Q ss_pred ecccCC------CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 124 DMTSMQ------GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 124 D~~~~~------gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
|++... +.||+|+++.........+...+.++|||||+|++..
T Consensus 133 Da~~~~~~~~~~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 133 DARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CTTCGGGTTTTCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccchhhhccccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 997642 6899999986655555666677788999999999874
No 110
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.29 E-value=8.3e-12 Score=127.06 Aligned_cols=133 Identities=12% Similarity=0.041 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHh--hcCCCCcccc--ccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCC
Q 004354 25 FTSKENWDKFFT--IRGIGDSFEW--YAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFS 100 (759)
Q Consensus 25 f~~~~yWd~~y~--~~~~~~~~eW--~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS 100 (759)
|....||+..|. ... ..+.. ....+.+...+...+.. .++.+|||+|||+|.++..+++.+ .+|+|+|+|
T Consensus 28 f~~~~~~~~~Y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~ 101 (231)
T 1vbf_A 28 FLPENLKDYAYAHTHEA--LPILPGINTTALNLGIFMLDELDL---HKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEIN 101 (231)
T ss_dssp HSCGGGGGGSSSSTTCC--EEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESC
T ss_pred cCCcchhhhccccCCCc--eeeCCCCccCCHHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCC
Confidence 445566766665 321 11110 11123445555566544 577899999999999999999987 579999999
Q ss_pred HHHHHHHHHHhccCCCCcEEEEeecccC-C--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 101 KVVISDMLRRNVRDRSDMRWRVMDMTSM-Q--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 101 ~~~I~~a~~r~~~~~~~i~f~~~D~~~~-~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.+++.++++..... +++++++|+.+. + ++||+|++....++. ..++.++|+|||++++....
T Consensus 102 ~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~----~~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 102 EKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATAPTL----LCKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp HHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBBSSC----CHHHHHTEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcHHHH----HHHHHHHcCCCcEEEEEEcC
Confidence 999999998875544 899999999873 3 789999998755443 34789999999999998754
No 111
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.28 E-value=9.2e-12 Score=124.85 Aligned_cols=102 Identities=14% Similarity=0.076 Sum_probs=84.3
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC---CCcEEEEeecccCC-----Cc-ccEEEeC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSMQ-----GG-LDALMEP 138 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~---~~i~f~~~D~~~~~-----gt-fD~Ii~~ 138 (759)
++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.+++++.... .+++++++|+.+.. ++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 467999999999999999888887789999999999999999875544 47999999987643 57 9999997
Q ss_pred CCCh-hHHHHHHHHH--HHhcccCcEEEEEEcCc
Q 004354 139 ELGH-KLGNQYLSEV--KRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 139 ~~~~-~~~~~~l~ei--~rvLkpGG~liiit~~~ 169 (759)
...+ .....+++.+ .++|+|||.+++.+...
T Consensus 133 ~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFHFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 6522 3367788888 67899999999887643
No 112
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.28 E-value=1.2e-11 Score=127.51 Aligned_cols=103 Identities=16% Similarity=0.088 Sum_probs=81.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhc-------cCCCCcEEEEeeccc-C----C-Ccc
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV-------RDRSDMRWRVMDMTS-M----Q-GGL 132 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~-------~~~~~i~f~~~D~~~-~----~-gtf 132 (759)
.++.+|||||||+|.++..|++.. ..+|+|+|+|+.+++.|++++. ....++.++++|+.+ + + ++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 356789999999999999998873 3479999999999999887653 234689999999986 3 2 899
Q ss_pred cEEEeCCCChhH----------HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 133 DALMEPELGHKL----------GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 133 D~Ii~~~~~~~~----------~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
|.|++....++. ...+++++.++|+|||.+++.+...
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCH
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH
Confidence 999886533332 1579999999999999999988654
No 113
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.27 E-value=1.3e-11 Score=120.38 Aligned_cols=117 Identities=14% Similarity=0.132 Sum_probs=90.9
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC-
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM- 128 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~- 128 (759)
.+...+...+.. ..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++..... .+++++++|+.+.
T Consensus 17 ~~~~~~~~~l~~--~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 17 KVRGAIFNMIGP--YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAI 94 (177)
T ss_dssp -CHHHHHHHHCS--CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHH
T ss_pred HHHHHHHHHHHh--hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhH
Confidence 344455555541 13577999999999999999998877789999999999999998875543 3689999998773
Q ss_pred C---CcccEEEeCCCCh-hHHHHHHHHHH--HhcccCcEEEEEEcCch
Q 004354 129 Q---GGLDALMEPELGH-KLGNQYLSEVK--RLLKSGGKFVCLTLAES 170 (759)
Q Consensus 129 ~---gtfD~Ii~~~~~~-~~~~~~l~ei~--rvLkpGG~liiit~~~~ 170 (759)
+ +.||+|+++...+ ......++.+. ++|+|||++++.+....
T Consensus 95 ~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 95 DCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HHBCSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HhhcCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 2 6799999986543 33667777776 99999999999876543
No 114
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.27 E-value=8.5e-12 Score=132.15 Aligned_cols=165 Identities=15% Similarity=0.096 Sum_probs=103.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
..+.+||+||+|+|.++..+....+..+|++||+||.+++.|++.+ |+ ++++++.+|+.++ .
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l----~-------- 185 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVI----D-------- 185 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGG----G--------
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhC----C--------
Confidence 5678999999998866554445556789999999999999999986 65 6899999999874 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhH
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 684 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~ 684 (759)
+..||+|+++....+ -..+++.+.+.|+|||.|+++........
T Consensus 186 -----------------------d~~FDvV~~~a~~~d-------------~~~~l~el~r~LkPGG~Lvv~~~~~~r~~ 229 (298)
T 3fpf_A 186 -----------------------GLEFDVLMVAALAEP-------------KRRVFRNIHRYVDTETRIIYRTYTGMRAI 229 (298)
T ss_dssp -----------------------GCCCSEEEECTTCSC-------------HHHHHHHHHHHCCTTCEEEEEECCGGGGG
T ss_pred -----------------------CCCcCEEEECCCccC-------------HHHHHHHHHHHcCCCcEEEEEcCcchhhh
Confidence 157999999543211 26899999999999999999875432221
Q ss_pred -HHHHHHHHHHhcCceEEEeecC-CccEEEEEecCCCCCCCCcHHHHHHHHhhhcCCCchh
Q 004354 685 -KDMVISRMKMVFNHLFCLQLEE-DVNLVLFGLSSESCIKDNSFPEAAVQLGKLVKFQHLE 743 (759)
Q Consensus 685 -~~~v~~~l~~vF~~v~~~~~~~-~~N~Vl~a~~~~~~~~~~~l~~~a~~l~~~~~~~~~~ 743 (759)
...+.....+.|..+..+...+ -.|.|+|+.+....--.+.+-+..++=+.+++|+...
T Consensus 230 l~~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (298)
T 3fpf_A 230 LYAPVSDDDITGFRRAGVVLPSGKVNNTSVLVFKCPDKGELNSKLEGKPIPNPLLGLDSTR 290 (298)
T ss_dssp SSCCCCTGGGTTEEEEEEECCCTTCCCEEEEEEECC-------------------------
T ss_pred ccccCChhhhhhhhheeEECCCCCcCcEEEEEEccCCchHHHHHHhcccCCcceecccccc
Confidence 1111233445777766655443 4799999988876544455777777777777776443
No 115
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.27 E-value=1.1e-11 Score=131.80 Aligned_cols=99 Identities=14% Similarity=0.145 Sum_probs=81.7
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCC-------------------------------
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR------------------------------- 115 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~------------------------------- 115 (759)
++.+|||||||+|.++..|+.. +..+|+|+|+|+.+++.|+++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5689999999999999999987 44579999999999999988754321
Q ss_pred ----------------------------CCcEEEEeecccCC--------CcccEEEeCCCChh--------HHHHHHHH
Q 004354 116 ----------------------------SDMRWRVMDMTSMQ--------GGLDALMEPELGHK--------LGNQYLSE 151 (759)
Q Consensus 116 ----------------------------~~i~f~~~D~~~~~--------gtfD~Ii~~~~~~~--------~~~~~l~e 151 (759)
.+++|.++|+.... ++||+|+|....++ ....++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 47999999997532 78999999886532 37889999
Q ss_pred HHHhcccCcEEEEEE
Q 004354 152 VKRLLKSGGKFVCLT 166 (759)
Q Consensus 152 i~rvLkpGG~liiit 166 (759)
++++|+|||++++..
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 999999999999864
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.27 E-value=9e-12 Score=124.93 Aligned_cols=110 Identities=17% Similarity=0.128 Sum_probs=88.4
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~ 129 (759)
+.....+...+.. .++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.++++.... ..++++.++|+.+..
T Consensus 63 ~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 63 PYMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC
Confidence 3455556666554 6788999999999999999999854 6999999999999999887543 357999999998765
Q ss_pred ---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++||+|++....++.. .++.++|+|||++++....
T Consensus 139 ~~~~~~D~i~~~~~~~~~~----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIP----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSBCSSCC----THHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccchhhhh----HHHHHhcccCcEEEEEEcC
Confidence 7899999986554432 3688999999999988754
No 117
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.26 E-value=2e-11 Score=123.54 Aligned_cols=91 Identities=16% Similarity=0.115 Sum_probs=78.6
Q ss_pred CCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChhH-
Q 004354 69 PPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHKL- 144 (759)
Q Consensus 69 ~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~~- 144 (759)
+.+|||+|||+|.++..++.. +|+|+|+.+++.++++ +++++++|+.+++ ++||+|++....++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 679999999999999988654 9999999999988765 5899999998876 689999998765543
Q ss_pred -HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 145 -GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 145 -~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
...+++++.++|+|||.+++.+....
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 78999999999999999999887654
No 118
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.26 E-value=2.6e-11 Score=122.34 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=83.5
Q ss_pred CCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC-----CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ-----GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~-----gtfD~Ii~~~~ 140 (759)
++.+|||+|||+|.++..++... ..+++|+|+|+.+++.|+++.... ..++.++++|+.+++ ++||+|+++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 57799999999999999999874 247999999999999998887543 368999999998753 78999999754
Q ss_pred Chh----------HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 141 GHK----------LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 141 ~~~----------~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
.++ ....+++++.++|+|||.+++.+-.
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 322 1368999999999999999998754
No 119
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.25 E-value=6.8e-11 Score=123.13 Aligned_cols=152 Identities=14% Similarity=0.078 Sum_probs=103.8
Q ss_pred HHHHhhcCCCCC-CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---
Q 004354 56 PLISLIGAPTSS-PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--- 129 (759)
Q Consensus 56 ~l~~~l~~~~~~-~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--- 129 (759)
++..++.. . ++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.++++..... .+++++++|+.+..
T Consensus 39 ll~~~~~~---~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYL---PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCC---CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcC---CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhh
Confidence 34455543 5 678999999999999999998866589999999999999998875433 35999999998764
Q ss_pred --CcccEEEeCCCCh----------------------hHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhcccc-CCCc
Q 004354 130 --GGLDALMEPELGH----------------------KLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF-RFGW 184 (759)
Q Consensus 130 --gtfD~Ii~~~~~~----------------------~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~-~~~w 184 (759)
++||+|+++.... .....+++.+.++|+|||+++++.... ....+.... ..+|
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE--RLLDIIDIMRKYRL 193 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT--THHHHHHHHHHTTE
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH--HHHHHHHHHHHCCC
Confidence 7899999964211 124679999999999999999976322 122222222 2255
Q ss_pred eEEEEEeCCCCCCCCCceEEEEEEEeCCC
Q 004354 185 KMSVHAIPQKSSSEPSLQTFMVVADKENS 213 (759)
Q Consensus 185 ~v~~~~~~~~~~~~~~~~~f~~v~~K~~~ 213 (759)
........... .......+++.+.|..+
T Consensus 194 ~~~~~~~v~~~-~~~~~~~~l~~~~k~~~ 221 (259)
T 3lpm_A 194 EPKRIQFVHPR-SDREANTVLVEGIKDGK 221 (259)
T ss_dssp EEEEEEEEESS-TTSCCSEEEEEEEETCC
T ss_pred ceEEEEEeecC-CCCCcEEEEEEEEeCCC
Confidence 54432221111 12234456666677543
No 120
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.25 E-value=1.8e-11 Score=130.91 Aligned_cols=109 Identities=16% Similarity=0.127 Sum_probs=89.6
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhcc--------CCCCcEEEEeecccCC---------C
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR--------DRSDMRWRVMDMTSMQ---------G 130 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~--------~~~~i~f~~~D~~~~~---------g 130 (759)
++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++... ...+++++++|+.+.+ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5679999999999999999887666799999999999999887643 2346899999998752 4
Q ss_pred cccEEEeCCCChhH------HHHHHHHHHHhcccCcEEEEEEcCchhhhhhh
Q 004354 131 GLDALMEPELGHKL------GNQYLSEVKRLLKSGGKFVCLTLAESHVLGLL 176 (759)
Q Consensus 131 tfD~Ii~~~~~~~~------~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l 176 (759)
+||+|++....++. ...+++++.++|+|||.+++.+.........+
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~ 165 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRL 165 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHH
Confidence 89999998765442 57999999999999999999998776544443
No 121
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.24 E-value=1.6e-11 Score=125.08 Aligned_cols=124 Identities=15% Similarity=0.198 Sum_probs=90.2
Q ss_pred CCHHHHHHHHhhcCCCCccccccc--h---hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCC
Q 004354 26 TSKENWDKFFTIRGIGDSFEWYAE--W---PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFS 100 (759)
Q Consensus 26 ~~~~yWd~~y~~~~~~~~~eW~~~--~---~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS 100 (759)
...+||+...+..+ .....|... . ..+...+...+. .++.+|||+|||+|.++..+++.|. +|+|+|+|
T Consensus 6 ~~~~~y~~~~~~~g-~y~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s 79 (226)
T 3m33_A 6 HSRESYDRLARELG-GYRHPWARVLSGPDPELTFDLWLSRLL----TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFS 79 (226)
T ss_dssp --CHHHHHHHHHHT-TTSCCSCCEESSSCTTHHHHHHHHHHC----CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESC
T ss_pred hhHHHHHHHHHHhc-hhhhhhccccCCCCHHHHHHHHHHhcC----CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECC
Confidence 35678888776553 222234321 1 122222222211 3678999999999999999999876 69999999
Q ss_pred HHHHHHHHHHhccCCCCcEEEEeecc-cCC----CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEE
Q 004354 101 KVVISDMLRRNVRDRSDMRWRVMDMT-SMQ----GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFV 163 (759)
Q Consensus 101 ~~~I~~a~~r~~~~~~~i~f~~~D~~-~~~----gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~li 163 (759)
+.+++.++++ .++++++++|+. .++ ++||+|++... ...+++++.++|||||+++
T Consensus 80 ~~~~~~a~~~----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~----~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 80 PELLKLARAN----APHADVYEWNGKGELPAGLGAPFGLIVSRRG----PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp HHHHHHHHHH----CTTSEEEECCSCSSCCTTCCCCEEEEEEESC----CSGGGGGHHHHEEEEEEEE
T ss_pred HHHHHHHHHh----CCCceEEEcchhhccCCcCCCCEEEEEeCCC----HHHHHHHHHHHcCCCcEEE
Confidence 9999999887 467999999994 443 68999999743 4578899999999999999
No 122
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.23 E-value=1.1e-11 Score=121.53 Aligned_cols=117 Identities=14% Similarity=0.135 Sum_probs=90.3
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~ 128 (759)
..+...+...+.. ..++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.++++..... ++++++++|+.+.
T Consensus 29 ~~~~~~~~~~l~~--~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 29 DKVKESIFNMIGP--YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRA 106 (187)
T ss_dssp HHHHHHHHHHHCS--CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHHHh--hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHH
Confidence 3455555566532 13577999999999999999988876789999999999999988875433 4699999998773
Q ss_pred -------CCcccEEEeCCCCh-hHHHHHHHHH--HHhcccCcEEEEEEcCc
Q 004354 129 -------QGGLDALMEPELGH-KLGNQYLSEV--KRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 129 -------~gtfD~Ii~~~~~~-~~~~~~l~ei--~rvLkpGG~liiit~~~ 169 (759)
.++||+|+++...+ ......+..+ .++|+|||.+++.+...
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred HHHHHhcCCCCCEEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 26899999976532 2256677777 89999999999887554
No 123
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.23 E-value=1.4e-11 Score=125.54 Aligned_cols=103 Identities=17% Similarity=0.087 Sum_probs=83.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccC-----C-CcccEEEeCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSM-----Q-GGLDALMEPE 139 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~-----~-gtfD~Ii~~~ 139 (759)
++.+|||||||+|.++..+++... .+|+|||+|+.+++.+++++... ..++.++++|+.++ + ++||.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999999999998743 36999999999999999887544 35799999998774 3 8999999863
Q ss_pred CChhH----------HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 140 LGHKL----------GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 140 ~~~~~----------~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
..++. ...+++++.++|||||++++.+-...
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~ 154 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEP 154 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 22211 13699999999999999999986544
No 124
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.23 E-value=7.9e-12 Score=135.87 Aligned_cols=107 Identities=17% Similarity=0.203 Sum_probs=86.1
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC-
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ- 129 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~- 129 (759)
....+.+.+.. .++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.|+++....+ .+++++++|+.+++
T Consensus 52 ~~~~i~~~~~~---~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 127 (340)
T 2fyt_A 52 YRDFIYQNPHI---FKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHL 127 (340)
T ss_dssp HHHHHHHCGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC
T ss_pred HHHHHHhhhhh---cCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcC
Confidence 33444444433 46789999999999999999998877899999997 9999988775443 57999999998876
Q ss_pred --CcccEEEeCCC---C--hhHHHHHHHHHHHhcccCcEEE
Q 004354 130 --GGLDALMEPEL---G--HKLGNQYLSEVKRLLKSGGKFV 163 (759)
Q Consensus 130 --gtfD~Ii~~~~---~--~~~~~~~l~ei~rvLkpGG~li 163 (759)
++||+|++... . ......++.++.++|||||+++
T Consensus 128 ~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 78999998652 1 1237789999999999999987
No 125
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.23 E-value=2.1e-11 Score=123.47 Aligned_cols=102 Identities=12% Similarity=0.164 Sum_probs=83.1
Q ss_pred CCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC-----CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ-----GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~-----gtfD~Ii~~~~ 140 (759)
++.+|||||||+|.++..|++.. ..+|+|+|+|+.+++.|+++.... ..++.++++|+.+++ ++||.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 56799999999999999999873 246999999999999999887543 357999999998753 78999987542
Q ss_pred ChhH----------HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 141 GHKL----------GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 141 ~~~~----------~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.++. ...+++++.++|+|||.+++.+-..
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~ 156 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR 156 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 2211 3689999999999999999988543
No 126
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.23 E-value=1.5e-11 Score=128.20 Aligned_cols=96 Identities=23% Similarity=0.307 Sum_probs=81.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.++++. +++.+.++|+.+++ ++||+|++....
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHRLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTSCSBCTTCEEEEEEESCC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhhCCCCCCceeEEEEeCCh--
Confidence 67899999999999999999871 236999999999999988764 57899999998876 789999986543
Q ss_pred HHHHHHHHHHHhcccCcEEEEEEcCchhh
Q 004354 144 LGNQYLSEVKRLLKSGGKFVCLTLAESHV 172 (759)
Q Consensus 144 ~~~~~l~ei~rvLkpGG~liiit~~~~~~ 172 (759)
.+++++.++|+|||++++++....+.
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred ---hhHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 35899999999999999999876553
No 127
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.22 E-value=9.1e-11 Score=114.39 Aligned_cols=110 Identities=11% Similarity=0.123 Sum_probs=82.9
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChh--
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHK-- 143 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~-- 143 (759)
++.+|||+|||+|.++..+++.+ +|+|+|+|+.+++. ..+++++++|+.+.. ++||+|+++...++
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~--------~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~ 92 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES--------HRGGNLVRADLLCSINQESVDVVVFNPPYVPDT 92 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT--------CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTC
T ss_pred CCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc--------ccCCeEEECChhhhcccCCCCEEEECCCCccCC
Confidence 56799999999999999999987 79999999999875 357899999998743 89999999764432
Q ss_pred ---------HHHHHHHHHHHhcccCcEEEEEEcCch--hhhhhhccccCCCceEEEEE
Q 004354 144 ---------LGNQYLSEVKRLLKSGGKFVCLTLAES--HVLGLLFPKFRFGWKMSVHA 190 (759)
Q Consensus 144 ---------~~~~~l~ei~rvLkpGG~liiit~~~~--~~~~~l~~~~~~~w~v~~~~ 190 (759)
....++.++.+.| |||+++++..... .....++.. .+|......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~--~gf~~~~~~ 147 (170)
T 3q87_B 93 DDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEE--RGYGTRILK 147 (170)
T ss_dssp CCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHH--TTCEEEEEE
T ss_pred ccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHH--CCCcEEEEE
Confidence 2356788888888 9999999875432 223333332 367655433
No 128
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.21 E-value=1.9e-10 Score=118.82 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=89.3
Q ss_pred HHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeecccCC-
Q 004354 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQ- 129 (759)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~--~~~i~f~~~D~~~~~- 129 (759)
..+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.+++++... ..++++.++|+.+.+
T Consensus 86 ~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 86 SAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAEL 162 (258)
T ss_dssp HHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCC
T ss_pred HHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCC
Confidence 344455543 57889999999999999999987 4 347999999999999998886443 367999999998873
Q ss_pred --CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 130 --GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 130 --gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+.||+|+++... ...+++++.++|+|||++++.+...+
T Consensus 163 ~~~~~D~v~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~ 202 (258)
T 2pwy_A 163 EEAAYDGVALDLME---PWKVLEKAALALKPDRFLVAYLPNIT 202 (258)
T ss_dssp CTTCEEEEEEESSC---GGGGHHHHHHHEEEEEEEEEEESCHH
T ss_pred CCCCcCEEEECCcC---HHHHHHHHHHhCCCCCEEEEEeCCHH
Confidence 789999995432 34789999999999999999987653
No 129
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.21 E-value=5.6e-11 Score=117.49 Aligned_cols=140 Identities=14% Similarity=0.181 Sum_probs=99.7
Q ss_pred chhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecc
Q 004354 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (759)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~ 126 (759)
.+..+...+..++ .+..+|||+|||+|.++..++.. +. +|+++|+|+.|++.+++++...+...++...|..
T Consensus 35 ~ld~fY~~~~~~l-----~~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~ 108 (200)
T 3fzg_A 35 TLNDFYTYVFGNI-----KHVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKE 108 (200)
T ss_dssp GHHHHHHHHHHHS-----CCCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCH
T ss_pred hHHHHHHHHHhhc-----CCCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEEeccc
Confidence 3344555555566 35789999999999999999766 34 7999999999999999998766655455557764
Q ss_pred cCC--CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEE---cCch-----hhhhhhcccc--CCCceEEEEEeC
Q 004354 127 SMQ--GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLT---LAES-----HVLGLLFPKF--RFGWKMSVHAIP 192 (759)
Q Consensus 127 ~~~--gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit---~~~~-----~~~~~l~~~~--~~~w~v~~~~~~ 192 (759)
... ++||+|+.....|.. .+..+..+.+.|+|||.||... .+.. ......++.. ...|.++-.+++
T Consensus 109 ~~~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~ 188 (200)
T 3fzg_A 109 SDVYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG 188 (200)
T ss_dssp HHHTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET
T ss_pred ccCCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC
Confidence 433 889999998876655 4456679999999999998776 2221 1111122221 337999998888
Q ss_pred CC
Q 004354 193 QK 194 (759)
Q Consensus 193 ~~ 194 (759)
++
T Consensus 189 nE 190 (200)
T 3fzg_A 189 NE 190 (200)
T ss_dssp TE
T ss_pred ce
Confidence 74
No 130
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.21 E-value=2.2e-10 Score=119.67 Aligned_cols=151 Identities=13% Similarity=0.094 Sum_probs=102.8
Q ss_pred HHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhcc---CCC--CcEEEEeecccC--
Q 004354 57 LISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVR---DRS--DMRWRVMDMTSM-- 128 (759)
Q Consensus 57 l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~---~~~--~i~f~~~D~~~~-- 128 (759)
+..++.. .++.+|||+|||+|.++..++.... .+|+|+|+++.+++.++++... ... +++++++|+.+.
T Consensus 28 L~~~~~~---~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 28 LASLVAD---DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHTCCC---CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred HHHHhcc---cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 4445443 4677999999999999999998852 4699999999999999988754 332 489999999886
Q ss_pred --------CCcccEEEeCCCChh--------------------HHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhcccc
Q 004354 129 --------QGGLDALMEPELGHK--------------------LGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKF 180 (759)
Q Consensus 129 --------~gtfD~Ii~~~~~~~--------------------~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~ 180 (759)
.++||+|+++..... ....+++.+.++|+|||+++++.-.. ....++...
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~l 182 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ--SVAEIIAAC 182 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG--GHHHHHHHH
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH--HHHHHHHHH
Confidence 278999999742211 16788999999999999999876432 222233322
Q ss_pred CCCce-EEEEEeCCCCCCCCCceEEEEEEEeCCCc
Q 004354 181 RFGWK-MSVHAIPQKSSSEPSLQTFMVVADKENSS 214 (759)
Q Consensus 181 ~~~w~-v~~~~~~~~~~~~~~~~~f~~v~~K~~~~ 214 (759)
...|. +++..+... .......+++.++|..+.
T Consensus 183 ~~~~~~~~i~~v~~~--~~~~~~~~lv~~~k~~~~ 215 (260)
T 2ozv_A 183 GSRFGGLEITLIHPR--PGEDAVRMLVTAIKGSRA 215 (260)
T ss_dssp TTTEEEEEEEEEESS--TTSCCCEEEEEEEETCCC
T ss_pred HhcCCceEEEEEcCC--CCCCceEEEEEEEeCCCC
Confidence 22233 333333221 123445677777776543
No 131
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.21 E-value=1.2e-11 Score=119.28 Aligned_cols=102 Identities=12% Similarity=0.077 Sum_probs=82.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-------CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-------GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-------gtfD~Ii~~~~ 140 (759)
++.+|||+|||+|.++..++..+.. |+|+|+|+.+++.++++......+++++++|+.+.. ++||+|+++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 5679999999999999999998776 999999999999999887543337999999988742 27999999764
Q ss_pred ChhHHHHHHHHHH--HhcccCcEEEEEEcCch
Q 004354 141 GHKLGNQYLSEVK--RLLKSGGKFVCLTLAES 170 (759)
Q Consensus 141 ~~~~~~~~l~ei~--rvLkpGG~liiit~~~~ 170 (759)
.+.....+++.+. ++|+|||.+++.+....
T Consensus 120 ~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 120 YAMDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp TTSCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred CchhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 3223445566666 99999999998876544
No 132
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.21 E-value=4.5e-11 Score=131.26 Aligned_cols=103 Identities=12% Similarity=0.081 Sum_probs=84.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhc-------c---CCCCcEEEEeecccCC-----C
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-------R---DRSDMRWRVMDMTSMQ-----G 130 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~-------~---~~~~i~f~~~D~~~~~-----g 130 (759)
.++.+|||||||+|.++..++.. |...++|||+|+.+++.|+++.. . ...+++|+++|+.+++ .
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~ 251 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA 251 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccC
Confidence 68899999999999999999864 66679999999999998876431 1 1257999999999877 4
Q ss_pred cccEEEeCCCCh-hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 131 GLDALMEPELGH-KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 131 tfD~Ii~~~~~~-~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.+|+|+++.... ......|.++.|+|||||++++.....
T Consensus 252 ~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 252 NTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp TCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred CccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 799999976433 347788899999999999999886543
No 133
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.21 E-value=2.8e-11 Score=121.42 Aligned_cols=101 Identities=11% Similarity=0.033 Sum_probs=82.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccC-C---CcccEEEeCCCCh
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM-Q---GGLDALMEPELGH 142 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~-~---gtfD~Ii~~~~~~ 142 (759)
++.+|||+|||+|.++..++..|..+|+++|+|+.+++.++++..... .+++++++|+.+. + ++||+|+++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 467999999999999999888887789999999999999998875543 5799999998763 3 6899999976522
Q ss_pred -hHHHHHHHHHHH--hcccCcEEEEEEcC
Q 004354 143 -KLGNQYLSEVKR--LLKSGGKFVCLTLA 168 (759)
Q Consensus 143 -~~~~~~l~ei~r--vLkpGG~liiit~~ 168 (759)
.....+++.+.+ +|+|||++++.+..
T Consensus 134 ~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 236677888865 59999999987754
No 134
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=8.8e-11 Score=122.23 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccc-CC-CcccEEEeCCCChhH
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS-MQ-GGLDALMEPELGHKL 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~-~~-gtfD~Ii~~~~~~~~ 144 (759)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+.+++.++++.......+++.++|+.+ ++ ++||+|+++.. ...
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~-~~~ 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLY-AEL 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECC-HHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCc-HHH
Confidence 4678999999999999999999888 79999999999999998875544348999999876 33 78999999653 334
Q ss_pred HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 145 GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 145 ~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
...++.++.++|+|||++++..+..
T Consensus 197 ~~~~l~~~~~~LkpgG~lils~~~~ 221 (254)
T 2nxc_A 197 HAALAPRYREALVPGGRALLTGILK 221 (254)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHcCCCCEEEEEeecc
Confidence 6789999999999999999976543
No 135
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.19 E-value=2.3e-10 Score=134.19 Aligned_cols=151 Identities=15% Similarity=0.166 Sum_probs=109.0
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC--CeEEEEeCCHHHHHHHHHHhcc-------CCCCcEEEEeecc
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVR-------DRSDMRWRVMDMT 126 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~--~~VtgIDiS~~~I~~a~~r~~~-------~~~~i~f~~~D~~ 126 (759)
.+..++.. .++.+|||||||+|.++..|++.+. .+|+|+|+|+.+++.|++++.. ..++++|+++|+.
T Consensus 712 ~LLelL~~---~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 712 YALKHIRE---SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHH---SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHhcc---cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 34444443 3678999999999999999998862 4799999999999999886531 2357999999999
Q ss_pred cCC---CcccEEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEcCchh--hhhhh----------------cc---
Q 004354 127 SMQ---GGLDALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTLAESH--VLGLL----------------FP--- 178 (759)
Q Consensus 127 ~~~---gtfD~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~~~~~--~~~~l----------------~~--- 178 (759)
+++ ++||+|++....++. ...+++++.++|+|| .+++.+...++ ....+ +.
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~D 867 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHD 867 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSS
T ss_pred hCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccC
Confidence 887 899999998765543 456899999999999 77766643221 00000 00
Q ss_pred -----------------ccCCCceEEEEEeCCCCCCCCCceEEEEEEEe
Q 004354 179 -----------------KFRFGWKMSVHAIPQKSSSEPSLQTFMVVADK 210 (759)
Q Consensus 179 -----------------~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K 210 (759)
....+|.+.+..++.......+.+.-+-|++|
T Consensus 868 HrFEWTReEFr~Wae~LAer~GYsVefvGVGDg~ep~vG~~TQiAVFtR 916 (950)
T 3htx_A 868 HKFEWTREQFNQWASKLGKRHNYSVEFSGVGGSGEVEPGFASQIAIFRR 916 (950)
T ss_dssp CSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSCSSSTTCCSEEEEEEEE
T ss_pred cceeecHHHHHHHHHHHHHhcCcEEEEEccCCCCCCCCCCccEEEEEEE
Confidence 00226778888887754344667777777887
No 136
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.19 E-value=3.7e-11 Score=123.63 Aligned_cols=143 Identities=15% Similarity=0.044 Sum_probs=98.2
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC------CcccEEEeCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ------GGLDALMEPE 139 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~------gtfD~Ii~~~ 139 (759)
++.+|||+|||+|.++..++.. ...+|+|+|+|+.+++.++++.... ..+++++++|+.+++ ++||+|++..
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 5679999999999999999864 2346999999999999998876543 346999999987653 6899999976
Q ss_pred CChhHHHHHHHHHHHhcccCcEEEEEEcCc-hhhhhhhcccc-CCCceEEE-EEeCCCCCCCCCceEEEEEEEeCCCcc
Q 004354 140 LGHKLGNQYLSEVKRLLKSGGKFVCLTLAE-SHVLGLLFPKF-RFGWKMSV-HAIPQKSSSEPSLQTFMVVADKENSSV 215 (759)
Q Consensus 140 ~~~~~~~~~l~ei~rvLkpGG~liiit~~~-~~~~~~l~~~~-~~~w~v~~-~~~~~~~~~~~~~~~f~~v~~K~~~~~ 215 (759)
.. ....+++++.++|+|||++++..-.. ......+.... ..+|.+.. ..+... ...-..++++++|....|
T Consensus 150 ~~--~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~---~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 150 VA--RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLP---IEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp CS--CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECT---TTCCEEEEEEEEECSCCC
T ss_pred cC--CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecC---CCCCceEEEEEEecCCCC
Confidence 42 36899999999999999998875321 12122222221 23565432 223221 122345666667765544
No 137
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.19 E-value=6e-11 Score=130.85 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=88.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK- 143 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~- 143 (759)
++.+|||+|||+|.++..+++.|. +|+++|+|+.+++.+++++.....+++++++|+.+.. ++||+|+++...++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 567999999999999999999876 6999999999999999988766667999999998876 69999999764433
Q ss_pred ------HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 144 ------LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 144 ------~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
....+++++.++|+|||+++++....
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 37899999999999999999987544
No 138
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.19 E-value=3.8e-11 Score=132.46 Aligned_cols=102 Identities=17% Similarity=0.216 Sum_probs=85.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccC---------CCCcEEEEeecccC------C
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD---------RSDMRWRVMDMTSM------Q 129 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~---------~~~i~f~~~D~~~~------~ 129 (759)
.++.+|||+|||+|.++..|++. + ..+|+|+|+|+.+++.+++++... .++++|+++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999876 2 236999999999999998876421 26899999999876 4
Q ss_pred ---CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ---GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ---gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++||+|++....++. ...+++++.++|||||++++.++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEec
Confidence 799999998765543 789999999999999999998753
No 139
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.19 E-value=6.1e-11 Score=123.24 Aligned_cols=144 Identities=16% Similarity=0.079 Sum_probs=101.2
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC------CcccEEEeC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ------GGLDALMEP 138 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~------gtfD~Ii~~ 138 (759)
.++.+|||||||+|..+..|+.. +..+|+++|+|+.+++.++++.... ..+++++++|+.++. ++||+|++.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 45789999999999999999876 3346999999999999999887543 346999999998764 689999997
Q ss_pred CCChhHHHHHHHHHHHhcccCcEEEEEEcCc-hhhhhhhcccc-CCCceEE-EEEeCCCCCCCCCceEEEEEEEeCCCcc
Q 004354 139 ELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE-SHVLGLLFPKF-RFGWKMS-VHAIPQKSSSEPSLQTFMVVADKENSSV 215 (759)
Q Consensus 139 ~~~~~~~~~~l~ei~rvLkpGG~liiit~~~-~~~~~~l~~~~-~~~w~v~-~~~~~~~~~~~~~~~~f~~v~~K~~~~~ 215 (759)
... ....+++.+.++|+|||++++..-.. ......+.... ..||.+. +..+... ...-..++++++|.+..+
T Consensus 159 a~~--~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~~~~~~~~~~p---~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 159 AVA--PLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGRLGEVLALQLP---LSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp SSC--CHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEEEEEEEEEECT---TTCCEEEEEEEEECSCCC
T ss_pred CcC--CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCeEEEEEEeeCC---CCCCcEEEEEEEeCCCCC
Confidence 543 25789999999999999999876422 11112221111 1255543 3333221 223467777888866544
No 140
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.18 E-value=4.7e-11 Score=130.17 Aligned_cols=96 Identities=13% Similarity=0.133 Sum_probs=81.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---CcccEEEeCCC-
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ---GGLDALMEPEL- 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~---gtfD~Ii~~~~- 140 (759)
.++.+|||+|||+|.++..+++.|..+|+|+|+|+ +++.|+++....+ .+++++++|+.+++ ++||+|++...
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 35789999999999999999999887899999995 9999988875443 34999999999876 79999999642
Q ss_pred ----ChhHHHHHHHHHHHhcccCcEEE
Q 004354 141 ----GHKLGNQYLSEVKRLLKSGGKFV 163 (759)
Q Consensus 141 ----~~~~~~~~l~ei~rvLkpGG~li 163 (759)
.......++.++.++|||||+++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 12238889999999999999987
No 141
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.18 E-value=3.6e-11 Score=128.23 Aligned_cols=104 Identities=16% Similarity=0.142 Sum_probs=85.1
Q ss_pred CCCCeEEEECCCcchhHHHHH--HhCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeecccCC--CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLY--DAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ--GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~--~~G~~~VtgIDiS~~~I~~a~~r~~~~~~--~i~f~~~D~~~~~--gtfD~Ii~~~~ 140 (759)
.++.+|||+|||+|.++..++ .....+|+|+|+|+.+++.++++....+. +++++++|+.+++ ++||+|++...
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGL 196 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECCh
Confidence 467899999999999999885 22234699999999999999998755432 4999999999887 89999999774
Q ss_pred ChhH-----HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 141 GHKL-----GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 141 ~~~~-----~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
.++. ...+++++.++|+|||++++.++..+
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 4432 44589999999999999999876543
No 142
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.18 E-value=3.7e-11 Score=120.84 Aligned_cols=135 Identities=14% Similarity=0.065 Sum_probs=96.9
Q ss_pred CCCHHHHHHHHhhcCCCCccccc--cchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC--CeEEEEeCC
Q 004354 25 FTSKENWDKFFTIRGIGDSFEWY--AEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFS 100 (759)
Q Consensus 25 f~~~~yWd~~y~~~~~~~~~eW~--~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~--~~VtgIDiS 100 (759)
|....+|+..|.... ..+.+. ...+.+...+...+.. .++.+|||+|||+|.++..+++.+. .+|+++|+|
T Consensus 37 ~~~~~~~~~~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~ 111 (215)
T 2yxe_A 37 FLPEHLKEYAYVDTP--LEIGYGQTISAIHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERI 111 (215)
T ss_dssp GSCGGGGGGTTSCSC--EEEETTEEECCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESC
T ss_pred cCCchhhhhcccCCC--ccCCCCcEeCcHHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCC
Confidence 556667777775431 111111 1123444455555544 5778999999999999999998752 479999999
Q ss_pred HHHHHHHHHHhcc-CCCCcEEEEeecccCC---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 101 KVVISDMLRRNVR-DRSDMRWRVMDMTSMQ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 101 ~~~I~~a~~r~~~-~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.+++.++++... ...++++.++|+.... +.||+|++....++.. .++.++|+|||++++....
T Consensus 112 ~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~----~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 112 PELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP----EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC----HHHHHTEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHH----HHHHHHcCCCcEEEEEECC
Confidence 9999999887643 2356999999986533 6899999987554332 5889999999999988754
No 143
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.18 E-value=1.4e-10 Score=121.82 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccC-C-CCcEEEEeecccCC--CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD-R-SDMRWRVMDMTSMQ--GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~-~-~~i~f~~~D~~~~~--gtfD~Ii~~~~ 140 (759)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++.... + .++++.++|+.+.. ++||+|+++..
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~~~ 188 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIADIP 188 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEECCS
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEEcCc
Confidence 67789999999999999999987 2 346999999999999999887554 3 57999999998743 68999999543
Q ss_pred ChhHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 141 GHKLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 141 ~~~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
. ...+++++.++|+|||++++.+...
T Consensus 189 ~---~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 189 D---PWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp C---GGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred C---HHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 2 3578999999999999999998754
No 144
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.17 E-value=4.2e-10 Score=112.37 Aligned_cols=112 Identities=11% Similarity=0.061 Sum_probs=84.8
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQG 130 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~g 130 (759)
..+...+...+......++.+|||+|||+|.++..+++.|..+|+|+|+|+.+++.++++......+++++++|+.++++
T Consensus 32 ~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~ 111 (207)
T 1wy7_A 32 GNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNS 111 (207)
T ss_dssp HHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCC
T ss_pred hHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCC
Confidence 34444444443221224678999999999999999999887789999999999999998875544479999999999888
Q ss_pred cccEEEeCCCCh----hHHHHHHHHHHHhcccCcEEEE
Q 004354 131 GLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVC 164 (759)
Q Consensus 131 tfD~Ii~~~~~~----~~~~~~l~ei~rvLkpGG~lii 164 (759)
+||+|+++...+ .....+++++.+++ ||.+++
T Consensus 112 ~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 112 RVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp CCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred CCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 999999976422 22467888999998 554443
No 145
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.17 E-value=6.6e-11 Score=118.99 Aligned_cols=121 Identities=19% Similarity=0.299 Sum_probs=88.6
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
.++.+|||+|||+|.++..+ + .+|+|+|+|+. ++++.++|+.+++ ++||+|++....++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l---~-~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSI---R-NPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHC---C-SCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred CCCCeEEEECCcCCHHHHHh---h-ccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 45689999999999999877 2 35999999995 5678999998865 78999999775543
Q ss_pred H-HHHHHHHHHHhcccCcEEEEEEcCch----hhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCCCc
Q 004354 144 L-GNQYLSEVKRLLKSGGKFVCLTLAES----HVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENSS 214 (759)
Q Consensus 144 ~-~~~~l~ei~rvLkpGG~liiit~~~~----~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~~~ 214 (759)
. ...+++++.++|+|||++++.++... .....++. ..||.+...... ....++++++|....
T Consensus 128 ~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~--~~Gf~~~~~~~~-------~~~~~~~~~~k~~~~ 194 (215)
T 2zfu_A 128 TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVT--KLGFKIVSKDLT-------NSHFFLFDFQKTGPP 194 (215)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHH--HTTEEEEEEECC-------STTCEEEEEEECSSC
T ss_pred cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHH--HCCCEEEEEecC-------CCeEEEEEEEecCcc
Confidence 3 78999999999999999999886542 12222322 236765543322 234577778886543
No 146
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=2.7e-10 Score=116.61 Aligned_cols=139 Identities=13% Similarity=0.110 Sum_probs=107.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--C-cccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--G-GLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--g-tfD~Ii~~~~ 140 (759)
+++.+|||+|||+|.++..++..|. .+|+++|+++.+++.|+++....+ .++++.++|..+.. + .||+|+....
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm 99 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM 99 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC
Confidence 3578999999999999999999874 469999999999999999886544 35999999988765 3 7999887666
Q ss_pred ChhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeC
Q 004354 141 GHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKE 211 (759)
Q Consensus 141 ~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~ 211 (759)
.-.....++....+.|+++|+|++.........+.++... ||.+.-..+-.++ ...|-++++.++
T Consensus 100 Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~--Gf~i~~E~lv~e~----~~~Yeii~~~~~ 164 (230)
T 3lec_A 100 GGRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAAN--DFEIVAEDILTEN----DKRYEILVVKHG 164 (230)
T ss_dssp CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHT--TEEEEEEEEEEC------CEEEEEEEEEC
T ss_pred chHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHC--CCEEEEEEEEEEC----CEEEEEEEEEeC
Confidence 6667889999999999999999999876655555555433 8888877764431 234445555554
No 147
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.16 E-value=6.9e-11 Score=128.45 Aligned_cols=114 Identities=18% Similarity=0.171 Sum_probs=93.5
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCC-eEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-C
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFH-GITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-G 130 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~-~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-g 130 (759)
....+...+.. .++.+|||+|||+|.++..+++.+.. +|+++|+|+.+++.++++........++..+|+.+.. +
T Consensus 184 ~~~~ll~~l~~---~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~ 260 (343)
T 2pjd_A 184 GSQLLLSTLTP---HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKG 260 (343)
T ss_dssp HHHHHHHHSCT---TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCS
T ss_pred HHHHHHHhcCc---CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccC
Confidence 34556666643 35679999999999999999988643 7999999999999999988666666889999998765 8
Q ss_pred cccEEEeCCCChh-------HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 131 GLDALMEPELGHK-------LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 131 tfD~Ii~~~~~~~-------~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+||+|+++...++ ....+++++.++|+|||.++++....
T Consensus 261 ~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 261 RFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred CeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 9999999765442 27899999999999999999987543
No 148
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.16 E-value=1.1e-10 Score=123.12 Aligned_cols=133 Identities=14% Similarity=0.188 Sum_probs=91.1
Q ss_pred HHHHHHHHhhcCCCCccccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcch----hHHHHHHh-C-----CCeEEEE
Q 004354 28 KENWDKFFTIRGIGDSFEWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSR----LSEHLYDA-G-----FHGITNV 97 (759)
Q Consensus 28 ~~yWd~~y~~~~~~~~~eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~----ls~~L~~~-G-----~~~VtgI 97 (759)
.+.|+.+++.-..+ .-+|+.+...+...-...+.. .+..+|||+|||||. ++..|++. + + +|+|+
T Consensus 69 ~~e~~~l~~~lt~~-~t~FfRd~~~f~~l~~~llp~---~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~-~I~at 143 (274)
T 1af7_A 69 SAEWQAFINALTTN-LTAFFREAHHFPILAEHARRR---HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRW-KVFAS 143 (274)
T ss_dssp CTHHHHHHHHHCCC-CCCTTTTTTHHHHHHHHHHHS---CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSE-EEEEE
T ss_pred HHHHHHHHHHHhhc-CccccCChHHHHHHHHHccCC---CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCe-EEEEE
Confidence 44566666543211 123555444443332233332 245799999999999 56556654 3 3 69999
Q ss_pred eCCHHHHHHHHHHhcc-----------------------CC---------CCcEEEEeecccCC----CcccEEEeCCCC
Q 004354 98 DFSKVVISDMLRRNVR-----------------------DR---------SDMRWRVMDMTSMQ----GGLDALMEPELG 141 (759)
Q Consensus 98 DiS~~~I~~a~~r~~~-----------------------~~---------~~i~f~~~D~~~~~----gtfD~Ii~~~~~ 141 (759)
|+|+.||+.|++.... .+ ..+.|.++|+.+.+ +.||+|+|.+..
T Consensus 144 Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvl 223 (274)
T 1af7_A 144 DIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVM 223 (274)
T ss_dssp ESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSG
T ss_pred ECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCch
Confidence 9999999999886410 00 26899999998843 689999997754
Q ss_pred h----hHHHHHHHHHHHhcccCcEEEEE
Q 004354 142 H----KLGNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 142 ~----~~~~~~l~ei~rvLkpGG~liii 165 (759)
. ....+++++++++|+|||++++-
T Consensus 224 iyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 224 IYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp GGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred HhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 3 23689999999999999999863
No 149
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.16 E-value=4.4e-11 Score=126.74 Aligned_cols=103 Identities=13% Similarity=0.092 Sum_probs=77.5
Q ss_pred CCCCeEEEECCCcchhHHHH----HHhCC-Ce--EEEEeCCHHHHHHHHHHhccC--CCCcE--EEEeecccC-------
Q 004354 67 SPPPQILVPGCGNSRLSEHL----YDAGF-HG--ITNVDFSKVVISDMLRRNVRD--RSDMR--WRVMDMTSM------- 128 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L----~~~G~-~~--VtgIDiS~~~I~~a~~r~~~~--~~~i~--f~~~D~~~~------- 128 (759)
.++.+|||||||+|.++..+ ...+. .. ++|+|+|+.|++.+++++... ..++. +.++|+.++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 45679999999999876543 33322 22 499999999999999887432 23444 445555432
Q ss_pred -C-CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 129 -Q-GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 129 -~-gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+ ++||+|++....++. ...++++++|+|||||++++.....
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 2 789999998877765 8899999999999999999987654
No 150
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.16 E-value=2.6e-10 Score=117.72 Aligned_cols=140 Identities=11% Similarity=0.044 Sum_probs=108.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--C-cccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--G-GLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--g-tfD~Ii~~~~ 140 (759)
.++.+|||||||+|.++..|+..|. ..|+++|+++.+++.|++++...+ .++++.++|..+.. + .||+|+....
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm 99 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM 99 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC
Confidence 3578999999999999999999874 469999999999999999876554 35999999988765 4 5999987666
Q ss_pred ChhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCC
Q 004354 141 GHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 212 (759)
Q Consensus 141 ~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~ 212 (759)
.-.....++.+..+.|+++|+|++.........+.++... ||.+.-..+-.+ ....|.++++.++.
T Consensus 100 Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~--Gf~i~~E~lv~e----~~k~Yeii~~~~~~ 165 (244)
T 3gnl_A 100 GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQN--NWLITSEAILRE----DNKVYEIMVLAPSE 165 (244)
T ss_dssp CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHH--TEEEEEEEEEEE----TTEEEEEEEEEECS
T ss_pred chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHC--CCEEEEEEEEEE----CCEEEEEEEEEeCC
Confidence 6667889999999999999999998876555555554433 788766554432 24566677767654
No 151
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.16 E-value=8.1e-11 Score=129.63 Aligned_cols=99 Identities=14% Similarity=0.102 Sum_probs=83.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~~~ 142 (759)
.++.+|||||||+|.++..+++.|..+|+|+|+| .+++.++++....+ .+++++++|+.++. ++||+|++....+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGY 140 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBT
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhh
Confidence 5678999999999999999999988789999999 99999988875543 45999999999877 7999999954222
Q ss_pred -----hHHHHHHHHHHHhcccCcEEEEEE
Q 004354 143 -----KLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 143 -----~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.....++.++.++|+|||.+++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 237889999999999999987543
No 152
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.15 E-value=1.3e-10 Score=127.83 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=90.3
Q ss_pred HHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC----CCcEEEEeecccC
Q 004354 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR----SDMRWRVMDMTSM 128 (759)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~----~~i~f~~~D~~~~ 128 (759)
...+...+.. .++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.+++++...+ .+++|.++|+.+.
T Consensus 211 ~~~ll~~l~~---~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~ 287 (375)
T 4dcm_A 211 ARFFMQHLPE---NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG 287 (375)
T ss_dssp HHHHHHTCCC---SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT
T ss_pred HHHHHHhCcc---cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc
Confidence 3456666654 456899999999999999999985 3479999999999999998875432 2588999999875
Q ss_pred C--CcccEEEeCCCChh-------HHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 129 Q--GGLDALMEPELGHK-------LGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 129 ~--gtfD~Ii~~~~~~~-------~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
. ++||+|+++...+. ....+++++.++|+|||+++++.....
T Consensus 288 ~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 288 VEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp CCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred CCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 4 78999999765432 256799999999999999999875543
No 153
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.15 E-value=3.2e-10 Score=115.81 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=105.6
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc-CC-C-cccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS-MQ-G-GLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~-~~-g-tfD~Ii~~~~ 140 (759)
+++.+|||||||+|.++..++..+. .+|+++|+++.+++.|+++....+ .++++.++|..+ ++ + .||+|+....
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 3568999999999999999999874 469999999999999999886554 359999999864 44 4 6999987666
Q ss_pred ChhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeC
Q 004354 141 GHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKE 211 (759)
Q Consensus 141 ~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~ 211 (759)
.......++.+..+.|+++|++++.........+.++.. .||.+.-..+-.++ ...|-++++.++
T Consensus 94 Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~--~Gf~i~~e~lv~e~----~~~Yeii~~~~~ 158 (225)
T 3kr9_A 94 GGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQD--HGFQIVAESILEEA----GKFYEILVVEAG 158 (225)
T ss_dssp CHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHH--TTEEEEEEEEEEET----TEEEEEEEEEES
T ss_pred ChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHH--CCCEEEEEEEEEEC----CEEEEEEEEEeC
Confidence 666688999999999999999999877655555555443 37888877654421 233444455554
No 154
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=3.6e-11 Score=119.96 Aligned_cols=114 Identities=16% Similarity=0.119 Sum_probs=69.8
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-- 129 (759)
+...+...+.. ..++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.++++......+++++++|+.+..
T Consensus 17 ~~~~~~~~l~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~ 94 (215)
T 4dzr_A 17 LVEEAIRFLKR--MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIE 94 (215)
T ss_dssp HHHHHHHHHTT--CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHH
T ss_pred HHHHHHHHhhh--cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhh
Confidence 33444444431 13678999999999999999999853 26999999999999998877544347889999987632
Q ss_pred -----CcccEEEeCCCChh----------------------------HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 -----GGLDALMEPELGHK----------------------------LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 -----gtfD~Ii~~~~~~~----------------------------~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++||+|+++...+. ....+++++.++|+|||+++++...
T Consensus 95 ~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 95 RAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp HHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred hhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 68999999632110 0178899999999999996555543
No 155
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.14 E-value=1.9e-10 Score=114.51 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=76.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCCcccEEEeCCCChhH--
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQGGLDALMEPELGHKL-- 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~~~-- 144 (759)
.++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.++++.. +++++++|+.+++++||+|+++...++.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEISGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGCCCCEEEEEECCCC-----
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHCCCCeeEEEECCCchhccC
Confidence 4678999999999999999998877779999999999999988763 7999999999988899999998754433
Q ss_pred --HHHHHHHHHHhcccCcEEEEEE
Q 004354 145 --GNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 145 --~~~~l~ei~rvLkpGG~liiit 166 (759)
...+++++.+++ |+.+++..
T Consensus 126 ~~~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp --CHHHHHHHHHHE--EEEEEEEE
T ss_pred chhHHHHHHHHHhc--CcEEEEEc
Confidence 357889999998 55444443
No 156
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.14 E-value=9.5e-11 Score=119.54 Aligned_cols=101 Identities=13% Similarity=0.276 Sum_probs=85.4
Q ss_pred CeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 531 VKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 531 ~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
.+||.||.|+|..+.+|...+| ..+|++||+|+.+++.|++++ |+. +++++++.+|+.+++....
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~~i~~~~gda~~~l~~~~---------- 126 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS-PSRVRFLLSRPLDVMSRLA---------- 126 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHGGGSC----------
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cCcEEEEEcCHHHHHHHhc----------
Confidence 4999999999999999998875 679999999999999999998 541 2689999999999987653
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
...||+|++|....+ -..+++.+.+.|+|||+|+++
T Consensus 127 ---------------------~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 127 ---------------------NDSYQLVFGQVSPMD-------------LKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ---------------------TTCEEEEEECCCTTT-------------HHHHHHHHHHHEEEEEEEEET
T ss_pred ---------------------CCCcCeEEEcCcHHH-------------HHHHHHHHHHHcCCCcEEEEe
Confidence 267999999864332 156999999999999999985
No 157
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.13 E-value=6.7e-10 Score=123.89 Aligned_cols=100 Identities=10% Similarity=0.033 Sum_probs=80.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHH-------HHHhccCC---CCcEEEEeecc-c---C---
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDM-------LRRNVRDR---SDMRWRVMDMT-S---M--- 128 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a-------~~r~~~~~---~~i~f~~~D~~-~---~--- 128 (759)
.++.+|||||||+|.++..++.. |...|+|+|+|+.+++.| ++++...+ .+++++++|.. . +
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~ 320 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAEL 320 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccc
Confidence 67889999999999999999985 666799999999999888 66664433 57999998644 2 1
Q ss_pred CCcccEEEeCCCCh-hHHHHHHHHHHHhcccCcEEEEEE
Q 004354 129 QGGLDALMEPELGH-KLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 129 ~gtfD~Ii~~~~~~-~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.+.||+|+++.... .....+++++.++|||||++++..
T Consensus 321 ~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 321 IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence 27899999865332 457788999999999999999874
No 158
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.13 E-value=1.5e-10 Score=119.64 Aligned_cols=101 Identities=21% Similarity=0.144 Sum_probs=81.4
Q ss_pred CCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhcc---------CCCCcEEEEeeccc-CC-----Cc
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVR---------DRSDMRWRVMDMTS-MQ-----GG 131 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~---------~~~~i~f~~~D~~~-~~-----gt 131 (759)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.+++++.. ...++.++++|+.+ ++ ++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 567999999999999999998864 3799999999999999887543 33689999999987 32 78
Q ss_pred ccEEEeCCCChhH----------HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 132 LDALMEPELGHKL----------GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 132 fD~Ii~~~~~~~~----------~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+|.|+......+. ...++.++.++|+|||.+++.+-.
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 9999865432221 158999999999999999998754
No 159
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.12 E-value=1.2e-10 Score=126.95 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=85.5
Q ss_pred HHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--
Q 004354 54 RDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 54 ~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~-- 129 (759)
...+...+.. .++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.++++....+ .+++++++|+.+++
T Consensus 39 ~~~i~~~l~~---~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 39 QRAILQNHTD---FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHTGGG---TTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHHhcccc---CCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC
Confidence 3344444433 46789999999999999999998877899999997 8888888765433 57999999999876
Q ss_pred CcccEEEeCCCCh----hHHHHHHHHHHHhcccCcEEEEE
Q 004354 130 GGLDALMEPELGH----KLGNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 130 gtfD~Ii~~~~~~----~~~~~~l~ei~rvLkpGG~liii 165 (759)
++||+|++....+ ......+.++.++|+|||.+++.
T Consensus 115 ~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 115 EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7899999975432 22567788899999999999854
No 160
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.12 E-value=1.1e-10 Score=117.60 Aligned_cols=97 Identities=14% Similarity=0.194 Sum_probs=81.4
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC--C---CcccEEEeCCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM--Q---GGLDALMEPELG 141 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~--~---gtfD~Ii~~~~~ 141 (759)
.++.+|||+|||+|.++..+++.| .+++|+|+|+.+++.++++. .++.++|+.+. + ++||+|++....
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChh
Confidence 367899999999999999999886 57999999999999887654 37899998763 2 789999997755
Q ss_pred hhH--HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 142 HKL--GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 142 ~~~--~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++. ...+++++.++|+|||++++.+....
T Consensus 104 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 104 EHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp GGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred hhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 443 78999999999999999999876543
No 161
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.11 E-value=1.4e-10 Score=118.88 Aligned_cols=136 Identities=12% Similarity=0.059 Sum_probs=96.9
Q ss_pred CCCCHHHHHHHHhhcCCCCccc--cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCH
Q 004354 24 DFTSKENWDKFFTIRGIGDSFE--WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK 101 (759)
Q Consensus 24 ~f~~~~yWd~~y~~~~~~~~~e--W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~ 101 (759)
.|....+|+..|.... ..+. .....+.+...+...+.. .++.+|||+|||+|.++..+++.+..+|+++|+|+
T Consensus 50 ~f~~~~~~~~~y~~~~--~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~ 124 (235)
T 1jg1_A 50 LSVEDKYKKYAHIDEP--LPIPAGQTVSAPHMVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIP 124 (235)
T ss_dssp GGSCGGGGGGTTSSSC--EECSTTCEECCHHHHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCH
T ss_pred hhCCchhhhcCccCCC--cccCCCceeccHHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCH
Confidence 4566667777665431 1221 112234455556666654 57789999999999999999987425699999999
Q ss_pred HHHHHHHHHhccC-CCCcEEEEeeccc-CC--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 102 VVISDMLRRNVRD-RSDMRWRVMDMTS-MQ--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 102 ~~I~~a~~r~~~~-~~~i~f~~~D~~~-~~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
.+++.++++.... ..++++.++|+.. ++ +.||+|++....++. ..++.++|+|||++++....
T Consensus 125 ~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~~~~~----~~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 125 ELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAGAPKI----PEPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSSC----CHHHHHTEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCcHHHH----HHHHHHhcCCCcEEEEEEec
Confidence 9999999887543 3469999999732 22 459999997754432 34788999999999988754
No 162
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.11 E-value=1.4e-10 Score=119.40 Aligned_cols=109 Identities=10% Similarity=0.001 Sum_probs=87.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||.|.|.++.++.+..|. ++++||++|.|++.|++++.- ...+++++.+|+.+.+....
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~----------- 125 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPR-QTHKVIPLKGLWEDVAPTLP----------- 125 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGG-CSSEEEEEESCHHHHGGGSC-----------
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhh-CCCceEEEeehHHhhccccc-----------
Confidence 34579999999999999999887664 899999999999999999843 34679999999998876544
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC-hHHHHHHHHHccCcCcEEEE
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~-~~~fl~~~~~~L~~~Gilv~ 675 (759)
+..||.|+.|....... ..++. -..+++.++++|+|||+|++
T Consensus 126 --------------------~~~FD~i~~D~~~~~~~------~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 126 --------------------DGHFDGILYDTYPLSEE------TWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp --------------------TTCEEEEEECCCCCBGG------GTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred --------------------ccCCceEEEeeeecccc------hhhhcchhhhhhhhhheeCCCCEEEE
Confidence 46799999987654211 22222 35688999999999999986
No 163
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.11 E-value=2.1e-10 Score=118.11 Aligned_cols=108 Identities=14% Similarity=0.238 Sum_probs=88.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
..+.+||.||.|+|..+.++...+| ..+|++||+||.++++|++++ |+ +++++++++|+.+++......
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~----- 141 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV--EHKINFIESDAMLALDNLLQG----- 141 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHS-----
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHhc-----
Confidence 3567999999999999999999887 679999999999999999998 55 568999999999998765310
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
......||+|++|.+.. ....+++.+.+.|+|||++++.
T Consensus 142 ---------------------~~~~~~fD~I~~d~~~~-------------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 142 ---------------------QESEGSYDFGFVDADKP-------------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp ---------------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCCCCcCEEEECCchH-------------HHHHHHHHHHHhcCCCeEEEEe
Confidence 00125799999985432 1278999999999999999984
No 164
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.11 E-value=2.2e-10 Score=117.36 Aligned_cols=111 Identities=14% Similarity=0.063 Sum_probs=87.1
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~ 127 (759)
+.....+..++.. .++.+|||+|||+|..+..|++.. ..+|+++|+|+.+++.+++++.... .+++++++|+.+
T Consensus 57 ~~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 57 RLTLDLIKQLIRM---NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp HHHHHHHHHHHHH---HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHHHHHhh---cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 3444455555443 357899999999999999999842 3469999999999999999875544 479999999976
Q ss_pred C-----CCcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEE
Q 004354 128 M-----QGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 128 ~-----~gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liii 165 (759)
. .++||+|++.... .....+++++.++|+|||++++-
T Consensus 134 ~~~~~~~~~fD~V~~~~~~-~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 134 QFENVNDKVYDMIFIDAAK-AQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp CHHHHTTSCEEEEEEETTS-SSHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHhhccCCccEEEEcCcH-HHHHHHHHHHHHhcCCCeEEEEe
Confidence 4 2789999986532 23677999999999999999874
No 165
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.10 E-value=3.1e-10 Score=117.69 Aligned_cols=108 Identities=15% Similarity=0.203 Sum_probs=87.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
..+.+||.||.|+|..+..+...+| ..+|++||+++.+++.|++++ |+ +++++++++|+.+++......
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~l~~~----- 150 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV--DHKIDFREGPALPVLDEMIKD----- 150 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHS-----
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCeEEEECCHHHHHHHHHhc-----
Confidence 3567999999999999999999887 679999999999999999987 54 568999999999998765200
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
+.....||+|++|.+..+ ...+|+.+.+.|+|||+|++.
T Consensus 151 ---------------------~~~~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 151 ---------------------EKNHGSYDFIFVDADKDN-------------YLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp ---------------------GGGTTCBSEEEECSCSTT-------------HHHHHHHHHHHBCTTCCEEEE
T ss_pred ---------------------cCCCCCEEEEEEcCchHH-------------HHHHHHHHHHhCCCCeEEEEe
Confidence 000257999999864321 268999999999999999874
No 166
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.10 E-value=3e-10 Score=118.52 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=82.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CC-CeEEEEeCCHH------HHHHHHHHhccCC--CCcEEEEee-c--ccCC---C
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKV------VISDMLRRNVRDR--SDMRWRVMD-M--TSMQ---G 130 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~-~~VtgIDiS~~------~I~~a~~r~~~~~--~~i~f~~~D-~--~~~~---g 130 (759)
.++.+|||||||+|.++..+++. |. .+|+|+|+|+. +++.++++..... ++++++++| + ..++ +
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 57889999999999999999987 43 47999999997 8999988875443 479999998 3 3332 7
Q ss_pred cccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 131 GLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 131 tfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+||+|++....++. ...+++.+.++++|||++++.++..
T Consensus 122 ~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 122 HFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 89999997755443 5567777777777899999988654
No 167
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.10 E-value=2.9e-10 Score=117.53 Aligned_cols=112 Identities=17% Similarity=0.204 Sum_probs=89.6
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC-CC-cEEEEeeccc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR-SD-MRWRVMDMTS 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~-~~-i~f~~~D~~~ 127 (759)
.....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.|+++....+ ++ +++.++|+.+
T Consensus 80 ~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 80 KDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred hHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 334455555554 67889999999999999999988 4 3579999999999999998875432 34 9999999986
Q ss_pred CC--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 128 MQ--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 128 ~~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.. ++||+|+++... ...+++++.++|+|||++++.+...
T Consensus 157 ~~~~~~~D~v~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 197 (255)
T 3mb5_A 157 GIEEENVDHVILDLPQ---PERVVEHAAKALKPGGFFVAYTPCS 197 (255)
T ss_dssp CCCCCSEEEEEECSSC---GGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred ccCCCCcCEEEECCCC---HHHHHHHHHHHcCCCCEEEEEECCH
Confidence 54 789999996543 3568999999999999999987653
No 168
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.10 E-value=2.8e-10 Score=122.92 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=79.6
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---CcccEEEeCCCC-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ---GGLDALMEPELG- 141 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~---gtfD~Ii~~~~~- 141 (759)
++.+|||+|||+|.++..+++.|..+|+|+|+| .+++.|+++....+ .+++++++|+.+++ ++||+|++....
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 567999999999999999999888789999999 58999888775433 46999999998875 789999986421
Q ss_pred ----hhHHHHHHHHHHHhcccCcEEE
Q 004354 142 ----HKLGNQYLSEVKRLLKSGGKFV 163 (759)
Q Consensus 142 ----~~~~~~~l~ei~rvLkpGG~li 163 (759)
......++.++.++|+|||+++
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 1227789999999999999987
No 169
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.10 E-value=1.2e-10 Score=119.07 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=73.1
Q ss_pred CCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCC-HHHHHHH---HHHhcc-CCCCcEEEEeecccCC----CcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFS-KVVISDM---LRRNVR-DRSDMRWRVMDMTSMQ----GGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS-~~~I~~a---~~r~~~-~~~~i~f~~~D~~~~~----gtfD~Ii~ 137 (759)
++.+|||||||+|.++..|++.. ..+|+|+|+| +.+++.| +++... ..+++.|+++|+.+++ +.+|.|.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 67899999999999999998642 2369999999 7676665 555533 3357999999999987 33444444
Q ss_pred CCCChhH-------HHHHHHHHHHhcccCcEEEEEE
Q 004354 138 PELGHKL-------GNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 138 ~~~~~~~-------~~~~l~ei~rvLkpGG~liiit 166 (759)
+...... ...++++++|+|||||++++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 3321111 2568999999999999999854
No 170
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.09 E-value=8.6e-10 Score=111.56 Aligned_cols=107 Identities=12% Similarity=0.169 Sum_probs=88.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|+|..+.++...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~------- 128 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL--NDRVEVRTGLALDSLQQIEN------- 128 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHH-------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHh-------
Confidence 457999999999999999999988 679999999999999999987 54 56899999999998876541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
.....||+|++|.... ....+|+.+.+.|+|||++++.-+
T Consensus 129 ---------------------~~~~~fD~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 129 ---------------------EKYEPFDFIFIDADKQ-------------NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp ---------------------TTCCCCSEEEECSCGG-------------GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred ---------------------cCCCCcCEEEEcCCcH-------------HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 0125699999976422 126899999999999999998643
No 171
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.09 E-value=4e-10 Score=116.68 Aligned_cols=105 Identities=17% Similarity=0.277 Sum_probs=88.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||+|+|..+..|...+| ..+|++||++|.+++.|++++ |+ .++++++.+|+.+++....
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~l~~~~-------- 132 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV--DQRVTLREGPALQSLESLG-------- 132 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHTCC--------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHhcC--------
Confidence 457999999999999999999887 789999999999999999998 55 4689999999999887643
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
....||+|++|....+ ...+|+.+.+.|+|||+|++.-+
T Consensus 133 ----------------------~~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 133 ----------------------ECPAFDLIFIDADKPN-------------NPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ----------------------SCCCCSEEEECSCGGG-------------HHHHHHHHHHTCCTTCEEEEECC
T ss_pred ----------------------CCCCeEEEEECCchHH-------------HHHHHHHHHHhcCCCeEEEEeCC
Confidence 1257999999764221 25799999999999999998643
No 172
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.09 E-value=1.9e-10 Score=116.07 Aligned_cols=99 Identities=11% Similarity=0.121 Sum_probs=75.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhc-----cCCCCcEEEEeecccCC---CcccEEEe
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNV-----RDRSDMRWRVMDMTSMQ---GGLDALME 137 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~-----~~~~~i~f~~~D~~~~~---gtfD~Ii~ 137 (759)
.++.+|||+|||+|.++..|++.+ ..+|+|+|+|+.+++.+.+++. ...++++|+++|+.+++ +. |.++.
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 467899999999999999999884 2469999999998886443321 23358999999999887 44 77664
Q ss_pred CCCChhH-------HHHHHHHHHHhcccCcEEEEEE
Q 004354 138 PELGHKL-------GNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 138 ~~~~~~~-------~~~~l~ei~rvLkpGG~liiit 166 (759)
....... ...+++++.++|||||++++..
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 3221111 3789999999999999999843
No 173
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.09 E-value=7.7e-10 Score=110.20 Aligned_cols=94 Identities=13% Similarity=0.252 Sum_probs=75.4
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--------------Ccc
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--------------GGL 132 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--------------gtf 132 (759)
.++.+|||+|||+|.++..+++.+. .|+|+|+++. ...++++++++|+++.. ++|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~~----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQEM----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTCS-EEEEEESSCC----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHcCC-cEEEEecccc----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 4678999999999999999998844 6999999983 12357999999998864 389
Q ss_pred cEEEeCCCC----hh---------HHHHHHHHHHHhcccCcEEEEEEcCchh
Q 004354 133 DALMEPELG----HK---------LGNQYLSEVKRLLKSGGKFVCLTLAESH 171 (759)
Q Consensus 133 D~Ii~~~~~----~~---------~~~~~l~ei~rvLkpGG~liiit~~~~~ 171 (759)
|+|+++... .+ ....+++.+.++|||||.|++..+..+.
T Consensus 93 D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 93 DDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred eEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 999996421 11 1467889999999999999998886543
No 174
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.08 E-value=3.5e-10 Score=120.40 Aligned_cols=99 Identities=18% Similarity=0.235 Sum_probs=80.0
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc------CCCCcEEEEeecccCC----CcccEEE
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSMQ----GGLDALM 136 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~------~~~~i~f~~~D~~~~~----gtfD~Ii 136 (759)
.+.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++.. ..++++++++|+.+.. ++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4679999999999999999987 456799999999999999987632 2468999999987753 7899999
Q ss_pred eCCCChhH------HHHHHHHHHHhcccCcEEEEEE
Q 004354 137 EPELGHKL------GNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 137 ~~~~~~~~------~~~~l~ei~rvLkpGG~liiit 166 (759)
++...+.. ...+++.+.++|+|||++++.+
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 96533221 2789999999999999999886
No 175
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.08 E-value=2.8e-10 Score=115.13 Aligned_cols=100 Identities=11% Similarity=-0.022 Sum_probs=81.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--------CcccE
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--------GGLDA 134 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--------gtfD~ 134 (759)
.++.+|||+|||+|..+..+++.- ..+|+++|+++.+++.+++++...+ .+++++++|+.+.. ++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 356899999999999999999872 2369999999999999998875433 35999999987642 46999
Q ss_pred EEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 135 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 135 Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
|++... ......+++++.++|+|||++++-..
T Consensus 137 v~~d~~-~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDAD-KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSC-GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCC-cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998764 33467899999999999998887643
No 176
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.08 E-value=3e-10 Score=117.62 Aligned_cols=100 Identities=9% Similarity=-0.033 Sum_probs=81.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC------CcccEEE
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ------GGLDALM 136 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~------gtfD~Ii 136 (759)
.++.+|||||||+|..+..+++. + ..+|+++|+|+.+++.+++++...+ .+++++++|+.+.. ++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 35689999999999999999986 1 3469999999999999999875433 46999999987632 4899999
Q ss_pred eCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 137 EPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 137 ~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+... ......+++++.++|+|||++++...
T Consensus 142 ~d~~-~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDAD-KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSC-GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCc-hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 8653 33467899999999999999988654
No 177
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.07 E-value=1.7e-10 Score=121.26 Aligned_cols=99 Identities=17% Similarity=0.068 Sum_probs=80.9
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC--CcccEEEeCCCCh-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--GGLDALMEPELGH- 142 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~--gtfD~Ii~~~~~~- 142 (759)
++.+|||+|||+|.++..++.. +..+|+++|+|+.+++.++++....+ .+++++++|+.+.. ++||+|+++....
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYID 188 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCBC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCCC
Confidence 5679999999999999999865 33479999999999999998875433 46999999997753 7899999973110
Q ss_pred --------------------------hHHHHHHHHHHHhcccCcEEEEEE
Q 004354 143 --------------------------KLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 143 --------------------------~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.....+++++.++|+|||++++..
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 235789999999999999998865
No 178
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.07 E-value=1.2e-09 Score=115.00 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=83.0
Q ss_pred CCCeEEEECCCc---chhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC-------------C-
Q 004354 68 PPPQILVPGCGN---SRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM-------------Q- 129 (759)
Q Consensus 68 ~~~~ILDlGCG~---G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~-------------~- 129 (759)
...+|||||||+ |.++..+.+.. -.+|+++|+|+.|++.+++++. ...+++|+++|+.+. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~-~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA-KDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT-TCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC-CCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 447999999999 99887776652 2369999999999999998874 346799999999753 2
Q ss_pred CcccEEEeCCCChhH----HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 130 GGLDALMEPELGHKL----GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 130 gtfD~Ii~~~~~~~~----~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.+||+|++....|+. ...++++++++|+|||++++..+..
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 579999998765543 6899999999999999999998764
No 179
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.07 E-value=2.5e-10 Score=116.34 Aligned_cols=98 Identities=9% Similarity=0.004 Sum_probs=79.8
Q ss_pred CCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC---CCcEEEEeecccCC-----CcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR---SDMRWRVMDMTSMQ-----GGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~---~~i~f~~~D~~~~~-----gtfD~Ii~ 137 (759)
+..+|||+|||+|..+..|++. + ..+|+++|+|+.+++.+++++...+ .+++++++|+.+.. ++||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 56 GSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp TCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 3459999999999999999885 2 2469999999999999999876533 36999999986542 78999999
Q ss_pred CCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 138 PELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 138 ~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.... .....+++++.++|+|||++++-.
T Consensus 136 d~~~-~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVSP-MDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCCT-TTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCcH-HHHHHHHHHHHHHcCCCcEEEEeC
Confidence 7542 235679999999999999999743
No 180
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.07 E-value=4.1e-10 Score=118.01 Aligned_cols=112 Identities=20% Similarity=0.225 Sum_probs=89.8
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccC----CCCcEEEEeecc
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD----RSDMRWRVMDMT 126 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~----~~~i~f~~~D~~ 126 (759)
....+...+.. .++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++.... ..++++.++|+.
T Consensus 87 ~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~ 163 (280)
T 1i9g_A 87 DAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLA 163 (280)
T ss_dssp HHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGG
T ss_pred HHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchH
Confidence 33444455543 57789999999999999999985 3 347999999999999999887543 367999999998
Q ss_pred cCC---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 127 SMQ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 127 ~~~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+.+ +.||+|+++... ...+++++.++|+|||++++.+....
T Consensus 164 ~~~~~~~~~D~v~~~~~~---~~~~l~~~~~~L~pgG~l~~~~~~~~ 207 (280)
T 1i9g_A 164 DSELPDGSVDRAVLDMLA---PWEVLDAVSRLLVAGGVLMVYVATVT 207 (280)
T ss_dssp GCCCCTTCEEEEEEESSC---GGGGHHHHHHHEEEEEEEEEEESSHH
T ss_pred hcCCCCCceeEEEECCcC---HHHHHHHHHHhCCCCCEEEEEeCCHH
Confidence 765 789999995433 34789999999999999999987644
No 181
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.07 E-value=4.3e-10 Score=121.77 Aligned_cols=119 Identities=18% Similarity=0.101 Sum_probs=90.3
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-C--CcEEEE
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S--DMRWRV 122 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~--~i~f~~ 122 (759)
|+.+.......+..++.. ..++.+|||+|||+|.++..++..|. +|+++|+|+.+++.+++++.... . ++++++
T Consensus 133 ~f~dq~~~~~~l~~~~~~--~~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~ 209 (332)
T 2igt_A 133 VFPEQIVHWEWLKNAVET--ADRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC 209 (332)
T ss_dssp CCGGGHHHHHHHHHHHHH--SSSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC
T ss_pred echHHHHHHHHHHHHHHh--cCCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 344444445556666631 02567999999999999999999888 79999999999999998875432 2 489999
Q ss_pred eecccCC-------CcccEEEeCCCC------------hhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 123 MDMTSMQ-------GGLDALMEPELG------------HKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 123 ~D~~~~~-------gtfD~Ii~~~~~------------~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+|+.+.. ++||+|+++... ......++.++.++|+|||.+++...
T Consensus 210 ~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 210 EDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp SCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred CcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 9997753 589999996421 11267899999999999999776653
No 182
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.07 E-value=4.7e-10 Score=121.33 Aligned_cols=116 Identities=18% Similarity=0.203 Sum_probs=89.6
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CC-CeEEEEeCCHHHHHHHHHHhcc------------CCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVR------------DRS 116 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~-~~VtgIDiS~~~I~~a~~r~~~------------~~~ 116 (759)
+.....+...+.. .++.+|||+|||+|.++..++.. |. .+|+++|+++.+++.|+++... ...
T Consensus 91 ~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 91 PKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp HHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCC
Confidence 3334445555544 57889999999999999999987 54 5799999999999999988653 125
Q ss_pred CcEEEEeecccCC-----CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCchhh
Q 004354 117 DMRWRVMDMTSMQ-----GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 172 (759)
Q Consensus 117 ~i~f~~~D~~~~~-----gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~ 172 (759)
++++.++|+.+.. +.||+|+++...+ ..++.++.++|+|||++++........
T Consensus 168 ~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~---~~~l~~~~~~LkpgG~lv~~~~~~~~~ 225 (336)
T 2b25_A 168 NVDFIHKDISGATEDIKSLTFDAVALDMLNP---HVTLPVFYPHLKHGGVCAVYVVNITQV 225 (336)
T ss_dssp CEEEEESCTTCCC-------EEEEEECSSST---TTTHHHHGGGEEEEEEEEEEESSHHHH
T ss_pred ceEEEECChHHcccccCCCCeeEEEECCCCH---HHHHHHHHHhcCCCcEEEEEeCCHHHH
Confidence 7999999998752 6899999965433 237899999999999999888765443
No 183
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.07 E-value=8e-10 Score=106.12 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=75.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccC----------C-Cccc
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSM----------Q-GGLD 133 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~----------~-gtfD 133 (759)
.++.+|||+|||+|.++..+++. |. .+++++|+|+ +++. +++++.++|+.+. + ++||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 46789999999999999999887 43 5799999999 6531 5789999999774 2 6899
Q ss_pred EEEeCCCChhH-------------HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 134 ALMEPELGHKL-------------GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 134 ~Ii~~~~~~~~-------------~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+|+++...++. ...+++++.++|+|||.+++.++..+
T Consensus 91 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 91 VVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred EEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 99996532211 26899999999999999999887654
No 184
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.06 E-value=1.8e-10 Score=122.07 Aligned_cols=99 Identities=11% Similarity=0.003 Sum_probs=79.2
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeecccCC-Ccc---cEEEeCCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ-GGL---DALMEPELG 141 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~--~i~f~~~D~~~~~-gtf---D~Ii~~~~~ 141 (759)
++.+|||+|||+|.++..++..+..+|+|+|+|+.+++.|+++....+. +++|+++|+.+.. ++| |+|+++...
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPPy 202 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPY 202 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCCC
Confidence 4579999999999999999887334699999999999999988755432 4999999998754 788 999997311
Q ss_pred h-----------hH----------HHHHHHHHH-HhcccCcEEEEEE
Q 004354 142 H-----------KL----------GNQYLSEVK-RLLKSGGKFVCLT 166 (759)
Q Consensus 142 ~-----------~~----------~~~~l~ei~-rvLkpGG~liiit 166 (759)
. +. ...+++++. +.|+|||.+++..
T Consensus 203 i~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 203 VKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp BCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 0 01 127899999 9999999999754
No 185
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.06 E-value=4.1e-10 Score=115.28 Aligned_cols=101 Identities=18% Similarity=0.289 Sum_probs=86.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHH-hhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVR-EMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~-~~~~~~~~~~~ 604 (759)
.+.+||.||+|+|..+.+|...+|..+|++||+++.+++.|++++ |+ .++++++.+|+.+++. ...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~-------- 140 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHF--ENQVRIIEGNALEQFENVND-------- 140 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTC--TTTEEEEESCGGGCHHHHTT--------
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhhcc--------
Confidence 457999999999999999999888889999999999999999987 44 4689999999998876 432
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
.+||+|++|....+ ...+++.+.+.|+|||+|+++
T Consensus 141 ------------------------~~fD~V~~~~~~~~-------------~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 141 ------------------------KVYDMIFIDAAKAQ-------------SKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ------------------------SCEEEEEEETTSSS-------------HHHHHHHHGGGEEEEEEEEEE
T ss_pred ------------------------CCccEEEEcCcHHH-------------HHHHHHHHHHhcCCCeEEEEe
Confidence 57999999864321 267999999999999999984
No 186
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=3.3e-10 Score=114.66 Aligned_cols=99 Identities=11% Similarity=0.026 Sum_probs=81.5
Q ss_pred CCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---------CcccE
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ---------GGLDA 134 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~---------gtfD~ 134 (759)
++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++++...+ .+++++++|+.+.. ++||+
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 5679999999999999999986 1 3469999999999999998875443 35999999986542 57999
Q ss_pred EEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 135 LMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 135 Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
|++... ......+++++.++|+|||++++...
T Consensus 144 v~~~~~-~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 144 IYIDAD-KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEECSC-GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEECCC-HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998653 33467899999999999999998654
No 187
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.05 E-value=8.7e-11 Score=130.75 Aligned_cols=100 Identities=17% Similarity=0.230 Sum_probs=78.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---CcccEEEeCCCChh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---GGLDALMEPELGHK 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---gtfD~Ii~~~~~~~ 143 (759)
.++.+|||||||+|.++..|++.|+ +|+|+|+|+.+++.++++.. ......|...+...++ ++||+|++....++
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h 183 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGI-RVRTDFFEKATADDVRRTEGPANVIYAANTLCH 183 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTC-CEECSCCSHHHHHHHHHHHCCEEEEEEESCGGG
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCC-CcceeeechhhHhhcccCCCCEEEEEECChHHh
Confidence 5778999999999999999999887 59999999999998876521 0001112233444433 88999999886655
Q ss_pred H--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 144 L--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 144 ~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
. ...++++++++|||||++++.+..
T Consensus 184 ~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 184 IPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp CTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 4 899999999999999999987654
No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=6.2e-10 Score=117.07 Aligned_cols=101 Identities=8% Similarity=0.016 Sum_probs=84.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC--CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~--gtfD~Ii~~~~~~ 142 (759)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.+++++.... .++.++++|+.+.+ +.||+|+++...
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH- 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS-
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc-
Confidence 467899999999999999999873 3479999999999999998875543 57899999998874 689999997643
Q ss_pred hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 143 KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 143 ~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
....++.++.++|+|||.+++..+..
T Consensus 197 -~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 -KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 35678899999999999999887654
No 189
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.05 E-value=2.5e-09 Score=112.24 Aligned_cols=100 Identities=17% Similarity=0.175 Sum_probs=84.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~ 140 (759)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++..... .++++.++|+.+.. +.||+|+++..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~~ 190 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDVP 190 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECCS
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECCc
Confidence 57789999999999999999987 4 3579999999999999998875543 47899999987754 68999999653
Q ss_pred ChhHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 141 GHKLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 141 ~~~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
. ...+++++.++|+|||++++.+...
T Consensus 191 ~---~~~~l~~~~~~L~pgG~l~~~~~~~ 216 (277)
T 1o54_A 191 D---PWNYIDKCWEALKGGGRFATVCPTT 216 (277)
T ss_dssp C---GGGTHHHHHHHEEEEEEEEEEESSH
T ss_pred C---HHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 3 3478999999999999999998753
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.04 E-value=1.7e-10 Score=119.20 Aligned_cols=107 Identities=12% Similarity=0.261 Sum_probs=87.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|+|..+.+|...+| ..+|++||++|.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~gda~~~l~~~~~------- 130 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ--EHKIKLRLGPALDTLHSLLN------- 130 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC--TTTEEEEESCHHHHHHHHHH-------
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHhh-------
Confidence 457999999999999999999886 679999999999999999998 55 56899999999999876520
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
......||+|++|....+ ...+|+.+.+.|+|||+|++.-
T Consensus 131 --------------------~~~~~~fD~V~~d~~~~~-------------~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 131 --------------------EGGEHQFDFIFIDADKTN-------------YLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp --------------------HHCSSCEEEEEEESCGGG-------------HHHHHHHHHHHEEEEEEEEEEC
T ss_pred --------------------ccCCCCEeEEEEcCChHH-------------hHHHHHHHHHhcCCCeEEEEEC
Confidence 000257999999874221 2569999999999999999853
No 191
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.04 E-value=5.4e-10 Score=123.66 Aligned_cols=118 Identities=13% Similarity=0.063 Sum_probs=91.3
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeec
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDM 125 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~ 125 (759)
||.+....+..+..++ .++.+|||+|||+|.++..++..|.. |+++|+|+.+++.+++++...+...++.++|+
T Consensus 197 ~f~dqr~~r~~l~~~~-----~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~~~D~ 270 (393)
T 4dmg_A 197 YYLDQRENRRLFEAMV-----RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRVDIRHGEA 270 (393)
T ss_dssp SCGGGHHHHHHHHTTC-----CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEEESCH
T ss_pred cCCCHHHHHHHHHHHh-----cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEEEccH
Confidence 4444444455555444 25789999999999999999998887 99999999999999998765444457889998
Q ss_pred ccCC----CcccEEEeCCCC-----------hhHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 126 TSMQ----GGLDALMEPELG-----------HKLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 126 ~~~~----gtfD~Ii~~~~~-----------~~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.+.. +.||+|+++... ......++..+.++|+|||.+++.+...
T Consensus 271 ~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 271 LPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp HHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 7752 559999996532 1125688999999999999999888764
No 192
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.04 E-value=5.6e-10 Score=119.88 Aligned_cols=109 Identities=14% Similarity=0.069 Sum_probs=86.7
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC--CeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF--HGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSM 128 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~--~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~ 128 (759)
.....+...+.. .++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.++++.... ..++++.++|+.+.
T Consensus 62 ~~~~~l~~~l~~---~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGL---DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCC---CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc
Confidence 444555555544 5788999999999999999998744 35999999999999999887543 35699999999885
Q ss_pred C---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 129 Q---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 129 ~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
. +.||+|++....++.. +++.++|||||++++...
T Consensus 139 ~~~~~~fD~Iv~~~~~~~~~----~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 139 VPEFSPYDVIFVTVGVDEVP----ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CGGGCCEEEEEECSBBSCCC----HHHHHHEEEEEEEEEEBC
T ss_pred cccCCCeEEEEEcCCHHHHH----HHHHHhcCCCcEEEEEEC
Confidence 3 7899999987554433 578899999999998753
No 193
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.03 E-value=3.6e-10 Score=114.55 Aligned_cols=113 Identities=9% Similarity=0.031 Sum_probs=84.5
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~ 127 (759)
.....+..++.. .++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++++.... .+++++++|+.+
T Consensus 45 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 45 AKGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 344444444432 35679999999999999999984 1 2369999999999999998875433 359999999755
Q ss_pred C----C-----CcccEEEeCCCChhH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 128 M----Q-----GGLDALMEPELGHKL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 128 ~----~-----gtfD~Ii~~~~~~~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
. . ++||+|++....+.. ...++..+ ++|+|||++++....
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 3 1 489999997744433 44667777 999999999887654
No 194
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.03 E-value=5.4e-10 Score=114.02 Aligned_cols=115 Identities=12% Similarity=0.076 Sum_probs=90.2
Q ss_pred chhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeec
Q 004354 49 EWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDM 125 (759)
Q Consensus 49 ~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~ 125 (759)
..+.....+...+.. .++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...+ .+++++++|+
T Consensus 38 ~~~~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 114 (233)
T 2gpy_A 38 MDLLGMESLLHLLKM---AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDA 114 (233)
T ss_dssp CCHHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCG
T ss_pred cCHHHHHHHHHHHhc---cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCH
Confidence 334555556555543 457799999999999999999873 3469999999999999998875443 4699999999
Q ss_pred ccC------CCcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 126 TSM------QGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 126 ~~~------~gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
.+. .++||+|++.... .....+++++.++|+|||++++.+.
T Consensus 115 ~~~~~~~~~~~~fD~I~~~~~~-~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 115 LQLGEKLELYPLFDVLFIDAAK-GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GGSHHHHTTSCCEEEEEEEGGG-SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred HHHHHhcccCCCccEEEECCCH-HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 874 2689999986532 2467899999999999999998743
No 195
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.03 E-value=8.2e-10 Score=112.03 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=86.3
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC------CeEEEEeCCHHHHHHHHHHhccC------CCCcE
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRD------RSDMR 119 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~------~~VtgIDiS~~~I~~a~~r~~~~------~~~i~ 119 (759)
.....+.+.+.. ...++.+|||+|||+|.++..+++... .+|+++|+|+.+++.++++.... ..+++
T Consensus 65 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~ 143 (227)
T 2pbf_A 65 HMHALSLKRLIN-VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFK 143 (227)
T ss_dssp HHHHHHHHHHTT-TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEE
Confidence 344444555521 125678999999999999999998743 37999999999999999886543 35799
Q ss_pred EEEeecccC-----C--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 120 WRVMDMTSM-----Q--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 120 f~~~D~~~~-----~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+.++|+.+. . ++||+|++....++ +++++.++|+|||++++...
T Consensus 144 ~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~----~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 144 IIHKNIYQVNEEEKKELGLFDAIHVGASASE----LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp EEECCGGGCCHHHHHHHCCEEEEEECSBBSS----CCHHHHHHEEEEEEEEEEEE
T ss_pred EEECChHhcccccCccCCCcCEEEECCchHH----HHHHHHHhcCCCcEEEEEEc
Confidence 999999774 2 78999999875543 46888999999999998865
No 196
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.03 E-value=6.6e-10 Score=112.64 Aligned_cols=111 Identities=16% Similarity=0.160 Sum_probs=85.5
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CC-CeEEEEeCCHHHHHHHHHHhccC------CCCcEEEEee
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF-HGITNVDFSKVVISDMLRRNVRD------RSDMRWRVMD 124 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~-~~VtgIDiS~~~I~~a~~r~~~~------~~~i~f~~~D 124 (759)
....+...+.. ...++.+|||+|||+|.++..+++. |. .+|+++|+|+.+++.++++.... ..++++.++|
T Consensus 63 ~~~~~l~~l~~-~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d 141 (226)
T 1i1n_A 63 MHAYALELLFD-QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD 141 (226)
T ss_dssp HHHHHHHHTTT-TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC
T ss_pred HHHHHHHHHHh-hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC
Confidence 33344444431 1256789999999999999999876 43 37999999999999998876542 3479999999
Q ss_pred cccCC---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 125 MTSMQ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 125 ~~~~~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.... +.||+|++....+ .+++++.++|+|||++++....
T Consensus 142 ~~~~~~~~~~fD~i~~~~~~~----~~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 142 GRMGYAEEAPYDAIHVGAAAP----VVPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp GGGCCGGGCCEEEEEECSBBS----SCCHHHHHTEEEEEEEEEEESC
T ss_pred cccCcccCCCcCEEEECCchH----HHHHHHHHhcCCCcEEEEEEec
Confidence 87654 7899999976543 3457889999999999988653
No 197
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.02 E-value=2.4e-09 Score=117.67 Aligned_cols=146 Identities=14% Similarity=0.192 Sum_probs=103.1
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~ 128 (759)
.+...+.... . .++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|++++...+ .+++|.++|+.++
T Consensus 205 ~la~~l~~~~-~---~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 205 SIANAMIELA-E---LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp HHHHHHHHHH-T---CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGG
T ss_pred HHHHHHHHhh-c---CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhC
Confidence 3444444444 3 5778999999999999999998865 269999999999999999886554 3799999999988
Q ss_pred C---CcccEEEeCCCC----------hhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhccccCCCceEEEEEeCCCC
Q 004354 129 Q---GGLDALMEPELG----------HKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSVHAIPQKS 195 (759)
Q Consensus 129 ~---gtfD~Ii~~~~~----------~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~~~~w~v~~~~~~~~~ 195 (759)
+ ++||+|+++... ......+++++.++| ||.+++++.....+.+ ++.. .||.+.-.....
T Consensus 281 ~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~~~~~~-~~~~--~G~~~~~~~~~~-- 353 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTEKKAIEE-AIAE--NGFEIIHHRVIG-- 353 (373)
T ss_dssp GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEESCHHHHHH-HHHH--TTEEEEEEEEEE--
T ss_pred CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECCHHHHHH-HHHH--cCCEEEEEEEEE--
Confidence 7 789999996421 112478889999999 6777777765444333 3322 266654433222
Q ss_pred CCCCCceEEEEEEEe
Q 004354 196 SSEPSLQTFMVVADK 210 (759)
Q Consensus 196 ~~~~~~~~f~~v~~K 210 (759)
...+..++|....
T Consensus 354 --nG~l~~~~~~~~~ 366 (373)
T 3tm4_A 354 --HGGLMVHLYVVKL 366 (373)
T ss_dssp --ETTEEEEEEEEEE
T ss_pred --cCCEEEEEEeccC
Confidence 2356677776543
No 198
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.02 E-value=1.8e-09 Score=114.01 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=78.6
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeC-CHHHHHHHHHHh-----ccCC------CCcEEEEeecccC------
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF-SKVVISDMLRRN-----VRDR------SDMRWRVMDMTSM------ 128 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDi-S~~~I~~a~~r~-----~~~~------~~i~f~~~D~~~~------ 128 (759)
.++.+|||+|||+|.++..++..|..+|+++|+ |+.+++.++++. .... .++++...|..+.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 356799999999999999999888767999999 899999998887 2222 3688887775442
Q ss_pred ---CCcccEEEeCCCChh--HHHHHHHHHHHhcc---c--CcEEEEEE
Q 004354 129 ---QGGLDALMEPELGHK--LGNQYLSEVKRLLK---S--GGKFVCLT 166 (759)
Q Consensus 129 ---~gtfD~Ii~~~~~~~--~~~~~l~ei~rvLk---p--GG~liiit 166 (759)
.++||+|++.+..++ ....+++.+.++|+ | ||+++++.
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 268999998664433 38899999999999 9 99876653
No 199
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.02 E-value=6.8e-10 Score=111.43 Aligned_cols=100 Identities=18% Similarity=0.292 Sum_probs=84.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|+|..+..+...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++....
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~-------- 125 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL--IDRVELQVGDPLGIAAGQR-------- 125 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG--GGGEEEEESCHHHHHTTCC--------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CceEEEEEecHHHHhccCC--------
Confidence 457999999999999999998887 779999999999999999887 54 4689999999998865432
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
. ||+|++|.... ....+++.+.+.|+|||+|++.
T Consensus 126 ------------------------~-fD~v~~~~~~~-------------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 126 ------------------------D-IDILFMDCDVF-------------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ------------------------S-EEEEEEETTTS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------------------------C-CCEEEEcCChh-------------hhHHHHHHHHHhcCCCeEEEEE
Confidence 5 99999985322 1268999999999999999984
No 200
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.02 E-value=1.9e-10 Score=118.48 Aligned_cols=108 Identities=13% Similarity=0.088 Sum_probs=82.5
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh----C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMT 126 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~----G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~ 126 (759)
.....+..++.. .++.+|||||||+|..+..|++. + ..+|+|+|+|+.+++.++. ...+++++++|+.
T Consensus 68 ~~~~~l~~~l~~---~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 68 DTQAVYHDMLWE---LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSS
T ss_pred HHHHHHHHHHHh---cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcch
Confidence 334445444433 24579999999999999999886 2 2469999999999877651 2367999999998
Q ss_pred cC---C----CcccEEEeCCCChhHHHHHHHHHHH-hcccCcEEEEEEc
Q 004354 127 SM---Q----GGLDALMEPELGHKLGNQYLSEVKR-LLKSGGKFVCLTL 167 (759)
Q Consensus 127 ~~---~----gtfD~Ii~~~~~~~~~~~~l~ei~r-vLkpGG~liiit~ 167 (759)
+. + .+||+|++... +.....++.++.+ +|+|||++++..+
T Consensus 141 ~~~~l~~~~~~~fD~I~~d~~-~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHLREMAHPLIFIDNA-HANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGGSSSCSSEEEEESS-CSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhhccCCCCEEEECCc-hHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 84 3 37999998654 3356789999997 9999999999653
No 201
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.02 E-value=9.8e-10 Score=111.19 Aligned_cols=107 Identities=19% Similarity=0.298 Sum_probs=87.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|+|..+.+|...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~~------- 134 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL--SDKIGLRLSPAKDTLAELIH------- 134 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC--CCceEEEeCCHHHHHHHhhh-------
Confidence 457999999999999999999887 679999999999999999998 54 46899999999998876541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
+....+||+|++|.... ....+++.+.+.|+|||+|++.-
T Consensus 135 --------------------~~~~~~fD~v~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 135 --------------------AGQAWQYDLIYIDADKA-------------NTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp --------------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred --------------------ccCCCCccEEEECCCHH-------------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 01125799999976322 12679999999999999998864
No 202
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.02 E-value=2.8e-10 Score=132.02 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=81.1
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC-----CcccEEEeCCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-----GGLDALMEPELG 141 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~-----gtfD~Ii~~~~~ 141 (759)
.+.+|||||||.|.+++.|++.|+. |||||+|+.+|+.|+.++...+ .+++|.++|+.++. +.||+|+|.+..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~-V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGAT-IVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCE-EEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 4679999999999999999999985 9999999999999998875543 57999999998863 689999999877
Q ss_pred hhHH----HHHHHHHHHhcccCcEEEEEEcC
Q 004354 142 HKLG----NQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 142 ~~~~----~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++.. ...+..+.+.|+++|..++....
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~ 175 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELA 175 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEec
Confidence 6651 22344567778888877666653
No 203
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.02 E-value=1.4e-09 Score=116.90 Aligned_cols=102 Identities=16% Similarity=0.169 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPELG 141 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~~ 141 (759)
.+..+|||+|||+|.++..+++.. ..+++++|+| .+++.++++..... .+++|+++|+.+.+ +.||+|++....
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 356899999999999999999872 2369999999 99999988764322 35999999998755 559999997654
Q ss_pred hh----HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 142 HK----LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 142 ~~----~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+. ....+++++.++|+|||++++.+...
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred ccCCHHHHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 43 36799999999999999999987643
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.01 E-value=7.6e-10 Score=114.73 Aligned_cols=98 Identities=14% Similarity=-0.004 Sum_probs=80.4
Q ss_pred CCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC----------CCccc
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM----------QGGLD 133 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~----------~gtfD 133 (759)
+..+|||||||+|..+..+++.- ..+|+++|+|+.+++.+++++...+ .+++++++|+.+. .++||
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 56799999999999999998861 2369999999999999998875443 4689999998653 26799
Q ss_pred EEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 134 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 134 ~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+|++... ......+++++.++|+|||++++-.
T Consensus 159 ~V~~d~~-~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD-KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC-STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc-hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9999754 2336789999999999999998754
No 205
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.01 E-value=8.8e-10 Score=125.10 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=80.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~~~ 142 (759)
.++.+|||||||+|.++..+++.|..+|+|+|+|+ +++.|+++....+ .+++++++|+.+++ +.||+|++....+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 235 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCHH
T ss_pred cCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCchH
Confidence 45789999999999999999988777899999999 9999888765443 57999999998865 7899999976422
Q ss_pred ----hHHHHHHHHHHHhcccCcEEEE
Q 004354 143 ----KLGNQYLSEVKRLLKSGGKFVC 164 (759)
Q Consensus 143 ----~~~~~~l~ei~rvLkpGG~lii 164 (759)
......+.++.++|+|||++++
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 2245677788999999999884
No 206
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.00 E-value=1.6e-09 Score=118.51 Aligned_cols=100 Identities=13% Similarity=0.107 Sum_probs=83.2
Q ss_pred CCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC----CCcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM----QGGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~----~gtfD~Ii~~~~ 140 (759)
...+|||||||+|.++..+++... .+++++|+ +.+++.++++..... .+++|+.+|+.+. ++.||+|++...
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 467999999999999999998632 36999999 999999998875443 4799999999884 378999999775
Q ss_pred Chh----HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 141 GHK----LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 141 ~~~----~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
.|. ....++++++++|+|||++++....
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIGKDSKVYIMETL 289 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCcEEEEEeec
Confidence 542 2578999999999999999998753
No 207
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.00 E-value=2.5e-09 Score=109.66 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=87.1
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC---C
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ---G 130 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~---g 130 (759)
.+...+.. .++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.++++..... .++++.+.|+.+.. +
T Consensus 82 ~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 82 YIALKLNL---NKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp HHHHHTTC---CTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred HHHHhcCC---CCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence 44445443 57789999999999999999988 4469999999999999998875433 57999999987754 6
Q ss_pred cccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 131 GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 131 tfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.||+|+++... ...+++++.++|+|||++++.+...
T Consensus 158 ~~D~v~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 158 IFHAAFVDVRE---PWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp CBSEEEECSSC---GGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred cccEEEECCcC---HHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 79999996542 3577899999999999999998753
No 208
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.00 E-value=4.3e-10 Score=116.24 Aligned_cols=102 Identities=13% Similarity=0.073 Sum_probs=79.5
Q ss_pred CCCeEEEECCCcchhHHHHHHh--C-CCeEEEEeCCHHHHHHHHHHhccC---CC--C----------------------
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA--G-FHGITNVDFSKVVISDMLRRNVRD---RS--D---------------------- 117 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~--G-~~~VtgIDiS~~~I~~a~~r~~~~---~~--~---------------------- 117 (759)
++.+|||+|||+|.++..++.. . ..+|+|+|+|+.+++.|+++.... .. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999876 2 236999999999999998776433 11 1
Q ss_pred ---cE-------------EEEeecccC-------C-CcccEEEeCCCC-----------hhHHHHHHHHHHHhcccCcEE
Q 004354 118 ---MR-------------WRVMDMTSM-------Q-GGLDALMEPELG-----------HKLGNQYLSEVKRLLKSGGKF 162 (759)
Q Consensus 118 ---i~-------------f~~~D~~~~-------~-gtfD~Ii~~~~~-----------~~~~~~~l~ei~rvLkpGG~l 162 (759)
++ |.++|+.+. . ..||+|+|+... ......+++++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 56 999998774 2 389999996421 133678999999999999999
Q ss_pred EEEEcCc
Q 004354 163 VCLTLAE 169 (759)
Q Consensus 163 iiit~~~ 169 (759)
+++....
T Consensus 211 ~~~~~~~ 217 (250)
T 1o9g_A 211 AVTDRSR 217 (250)
T ss_dssp EEEESSS
T ss_pred EEeCcch
Confidence 9865443
No 209
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.99 E-value=1.4e-10 Score=119.25 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=66.3
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhcc----CCCCcEEEE-eecccCCCcccEEEeCCCCh
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR----DRSDMRWRV-MDMTSMQGGLDALMEPELGH 142 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~----~~~~i~f~~-~D~~~~~gtfD~Ii~~~~~~ 142 (759)
.+.+|||||||+|.++..|++.|..+|+|+|+|+.|++.++++... ...++.+.. .|+.. ..||.+.+.....
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v~~ 114 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVSFI 114 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCSSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEEhh
Confidence 4569999999999999999999877899999999999987664321 112333333 22222 1234433322111
Q ss_pred hHHHHHHHHHHHhcccCcEEEEEE
Q 004354 143 KLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 143 ~~~~~~l~ei~rvLkpGG~liiit 166 (759)
. ...++.+++|+|||||+++++.
T Consensus 115 ~-l~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 115 S-LDLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp C-GGGTHHHHHHHSCTTCEEEEEE
T ss_pred h-HHHHHHHHHHhccCCCEEEEEE
Confidence 1 2689999999999999999874
No 210
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.99 E-value=4.7e-09 Score=104.09 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=72.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC---CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--------------
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG---FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-------------- 129 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G---~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-------------- 129 (759)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+ ..++++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhcccccccccc
Confidence 467899999999999999999873 2469999999921 2357899999997642
Q ss_pred --------------CcccEEEeCCCChh------H-------HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 130 --------------GGLDALMEPELGHK------L-------GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 130 --------------gtfD~Ii~~~~~~~------~-------~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
+.||+|+++...++ . ...+++++.++|+|||.+++..+..+
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 58999999653221 1 23588999999999999999777643
No 211
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=1.2e-09 Score=119.66 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=74.7
Q ss_pred CCCeEEEECCC------cchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---------C
Q 004354 68 PPPQILVPGCG------NSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ---------G 130 (759)
Q Consensus 68 ~~~~ILDlGCG------~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~---------g 130 (759)
+..+||||||| +|..+..+++. ...+|+|+|+|+.+. ...++++|+++|+.+++ +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecccccchhhhhhcccC
Confidence 56899999999 77777777664 224699999999762 13468999999998853 7
Q ss_pred cccEEEeCCCChh-HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 131 GLDALMEPELGHK-LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 131 tfD~Ii~~~~~~~-~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+||+|++....+. ....+|+++.++|||||+|++.++..
T Consensus 288 sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 288 PFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred CccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 8999999754332 37889999999999999999987643
No 212
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.99 E-value=6.4e-10 Score=117.81 Aligned_cols=93 Identities=16% Similarity=0.138 Sum_probs=71.2
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEE-EEeecccC-----C-CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSM-----Q-GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f-~~~D~~~~-----~-gtfD~Ii~~~~ 140 (759)
++.+|||+|||||.++..|++.|..+|+|+|+|+.|++.+.++. +++.. ...|+..+ + .+||+|++...
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----cccceecccCceecchhhCCCCCCCEEEEEee
Confidence 56799999999999999999998878999999999998754422 23222 12333332 2 34999998665
Q ss_pred ChhHHHHHHHHHHHhcccCcEEEEE
Q 004354 141 GHKLGNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 141 ~~~~~~~~l~ei~rvLkpGG~liii 165 (759)
.++ ...++.+++|+|+|||+++++
T Consensus 161 f~s-l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 161 FIS-LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSC-GGGTHHHHHHHSCTTCEEEEE
T ss_pred Hhh-HHHHHHHHHHHcCcCCEEEEE
Confidence 443 478999999999999999998
No 213
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.98 E-value=1.1e-09 Score=116.99 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=81.0
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhc-----cCCCCcEEEEeecccCC-----CcccEEE
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV-----RDRSDMRWRVMDMTSMQ-----GGLDALM 136 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~-----~~~~~i~f~~~D~~~~~-----gtfD~Ii 136 (759)
++.+|||||||+|.++..+++. +..+|+++|+|+.+++.+++++. ...++++++++|+.+.. ++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 5679999999999999999876 34579999999999999988762 12467999999987642 7899999
Q ss_pred eCCCChhH------HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 137 EPELGHKL------GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 137 ~~~~~~~~------~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++...+.. ...+++++.++|+|||++++....
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 96533321 168999999999999999987643
No 214
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=1.5e-09 Score=110.19 Aligned_cols=107 Identities=15% Similarity=0.241 Sum_probs=87.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
..+.+||.||.|+|.++..+...+| ..+|++||+++.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~~~~~~~------ 139 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA--EHKIDLRLKPALETLDELLA------ 139 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC--TTTEEEEESCHHHHHHHHHH------
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC--CCeEEEEEcCHHHHHHHHHh------
Confidence 3557999999999999999998877 679999999999999999998 54 46899999999998876541
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
.....+||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 140 ---------------------~~~~~~~D~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 140 ---------------------AGEAGTFDVAVVDADKE-------------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp ---------------------TTCTTCEEEEEECSCST-------------THHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 00015799999976422 1267999999999999999884
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.97 E-value=1.6e-09 Score=114.41 Aligned_cols=100 Identities=15% Similarity=0.203 Sum_probs=81.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhcc-----------CCCCcEEEEeecccC---CCccc
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-----------DRSDMRWRVMDMTSM---QGGLD 133 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~-----------~~~~i~f~~~D~~~~---~gtfD 133 (759)
.+.+|||||||+|.++..+++.+..+|+++|+++.+++.|++++.. ..++++++++|+.+. .++||
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~fD 154 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGFD 154 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCee
Confidence 4579999999999999999887666899999999999999988611 246799999998664 37899
Q ss_pred EEEeCCCChh----H--HHHHHHHHHHhcccCcEEEEEEc
Q 004354 134 ALMEPELGHK----L--GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 134 ~Ii~~~~~~~----~--~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+|++....+. . ...+++++.++|+|||++++.+.
T Consensus 155 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 155 VIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 9998653221 1 37889999999999999998753
No 216
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.97 E-value=5.4e-10 Score=112.18 Aligned_cols=97 Identities=18% Similarity=0.161 Sum_probs=78.6
Q ss_pred CCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC-C---CcccEEEeCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM-Q---GGLDALMEPE 139 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~-~---gtfD~Ii~~~ 139 (759)
+..+|||+|||+|..+..+++.. ..+|+++|+|+.+++.++++..... .+++++++|+.+. + + ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 46799999999999999998762 2469999999999999988764322 3589999998654 2 6 99999864
Q ss_pred CChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 140 LGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 140 ~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
. ......+++++.++|+|||++++..
T Consensus 135 ~-~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 D-VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T-TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C-hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 3 2236789999999999999998754
No 217
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.96 E-value=2.8e-10 Score=117.65 Aligned_cols=112 Identities=10% Similarity=-0.001 Sum_probs=86.5
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~ 127 (759)
.....+..++.. .+..+|||+|||+|..+..|++.- ..+|+++|+|+.+++.+++++...+ .+++++++|+.+
T Consensus 47 ~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 47 EQAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334444444432 356799999999999999999851 2369999999999999988875443 479999999865
Q ss_pred C---------CCcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 128 M---------QGGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 128 ~---------~gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
. .++||+|++... ......+++++.++|+|||++++-..
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~-~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD-KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC-GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHhhccCCCCEeEEEEcCC-hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 4 268999999764 33467799999999999999998643
No 218
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.96 E-value=1.9e-09 Score=119.11 Aligned_cols=119 Identities=18% Similarity=0.107 Sum_probs=91.3
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-C--CcEEEE
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-S--DMRWRV 122 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~--~i~f~~ 122 (759)
+|.+....+..+..++ .++.+|||+|||+|.++..++..|..+|+++|+|+.+++.|++++...+ . +++|++
T Consensus 195 ff~~~~~~~~~~~~~~-----~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~ 269 (385)
T 2b78_A 195 IFLDQRQVRNELINGS-----AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV 269 (385)
T ss_dssp SCGGGHHHHHHHHHTT-----TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE
T ss_pred cCCcHHHHHHHHHHHh-----cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 3444344445555553 2567999999999999999998888789999999999999999875543 2 799999
Q ss_pred eecccCC-------CcccEEEeCCCCh-----------hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 123 MDMTSMQ-------GGLDALMEPELGH-----------KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 123 ~D~~~~~-------gtfD~Ii~~~~~~-----------~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+|+.+.. .+||+|+++.... .....++..+.++|+|||.+++.+...
T Consensus 270 ~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 270 MDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9987642 4899999864221 115567888999999999999887653
No 219
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.96 E-value=1.8e-09 Score=110.50 Aligned_cols=107 Identities=16% Similarity=0.275 Sum_probs=87.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|.|..+..+...+| ..+|++||++|.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~--~~~i~~~~~d~~~~l~~l~~------- 142 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV--AEKISLRLGPALATLEQLTQ------- 142 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHHHHHHT-------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEEcCHHHHHHHHHh-------
Confidence 457999999999999999998887 579999999999999999987 65 46899999999998877541
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
......||+|++|.... .-..+++.+.+.|+|||++++.-
T Consensus 143 --------------------~~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 143 --------------------GKPLPEFDLIFIDADKR-------------NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp --------------------SSSCCCEEEEEECSCGG-------------GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred --------------------cCCCCCcCEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEeC
Confidence 00015799999986421 12679999999999999999864
No 220
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.96 E-value=8.4e-09 Score=111.96 Aligned_cols=144 Identities=17% Similarity=0.173 Sum_probs=100.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC------CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF------HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEP 138 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~------~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~ 138 (759)
.++.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.+....+.++.+.++|..... +.||+|+++
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~N 208 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISD 208 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEEC
Confidence 3567999999999999998887632 46999999999999998876544447899999987654 789999997
Q ss_pred CCChh--------------------HHHHHHHHHHHhcccCcEEEEEEcCc-------hhhhhhhccccCCCceEEEEEe
Q 004354 139 ELGHK--------------------LGNQYLSEVKRLLKSGGKFVCLTLAE-------SHVLGLLFPKFRFGWKMSVHAI 191 (759)
Q Consensus 139 ~~~~~--------------------~~~~~l~ei~rvLkpGG~liiit~~~-------~~~~~~l~~~~~~~w~v~~~~~ 191 (759)
..... ....++..+.+.|+|||++++++... ..+++.+.+. +|...+..+
T Consensus 209 PPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~---~~~~~ii~l 285 (344)
T 2f8l_A 209 LPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKN---GHIEGIIKL 285 (344)
T ss_dssp CCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHH---EEEEEEEEC
T ss_pred CCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhC---CeEEEeeeC
Confidence 53110 01368999999999999999987221 1222222222 454444455
Q ss_pred CCCCCCCCCceEEEEEEEeCCC
Q 004354 192 PQKSSSEPSLQTFMVVADKENS 213 (759)
Q Consensus 192 ~~~~~~~~~~~~f~~v~~K~~~ 213 (759)
+...-.....+..+++++|.+.
T Consensus 286 p~~~F~~~~~~~~i~vl~k~~~ 307 (344)
T 2f8l_A 286 PETLFKSEQARKSILILEKADV 307 (344)
T ss_dssp CGGGSCC-CCCEEEEEEEECCT
T ss_pred ChhhccCCCCceEEEEEECCCC
Confidence 4322224456788888888664
No 221
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.96 E-value=1.9e-09 Score=110.58 Aligned_cols=113 Identities=16% Similarity=0.070 Sum_probs=87.5
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecc
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMT 126 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~ 126 (759)
+.....+..++.. .++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...+ .++++.++|+.
T Consensus 46 ~~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 122 (239)
T 2hnk_A 46 PEEGQFLNILTKI---SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSAL 122 (239)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 3444455555433 357899999999999999999873 3479999999999999998875433 24899999986
Q ss_pred cC-------------------C-CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 127 SM-------------------Q-GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 127 ~~-------------------~-gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+. . ++||+|++... ......+++++.++|+|||++++...
T Consensus 123 ~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~-~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 123 ETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD-KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp HHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC-GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHhhcccccccccccCCCCCcCEEEEeCC-HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 52 1 57999999754 23466899999999999999998753
No 222
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.95 E-value=1.5e-09 Score=119.05 Aligned_cols=95 Identities=17% Similarity=0.170 Sum_probs=79.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCC---
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPEL--- 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~--- 140 (759)
++..|||||||+|.++..+++.|.++|+|||.|+ +++.|++.....+ ..++++++|++++. ..+|+|++...
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~ 161 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYG 161 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTT
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccccc
Confidence 4679999999999999999999998999999997 7788887665433 56999999998876 89999998431
Q ss_pred --ChhHHHHHHHHHHHhcccCcEEE
Q 004354 141 --GHKLGNQYLSEVKRLLKSGGKFV 163 (759)
Q Consensus 141 --~~~~~~~~l~ei~rvLkpGG~li 163 (759)
.+.....++....|+|+|||.++
T Consensus 162 l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 162 LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ccccchhhhHHHHHHhhCCCCceEC
Confidence 12237888999999999999876
No 223
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.95 E-value=2.7e-09 Score=118.14 Aligned_cols=118 Identities=11% Similarity=0.069 Sum_probs=92.8
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCC---CcEEEE
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS---DMRWRV 122 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~---~i~f~~ 122 (759)
||......+..+..+ .++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.|++++...+. +++|++
T Consensus 204 ff~~~~~~~~~l~~~------~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~ 277 (396)
T 3c0k_A 204 YYLDQRDSRLATRRY------VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVR 277 (396)
T ss_dssp SCGGGHHHHHHHHHH------CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCcCHHHHHHHHHHh------hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEE
Confidence 444444444455554 25679999999999999999998877899999999999999998765443 789999
Q ss_pred eecccCC-------CcccEEEeCCCCh-----------hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 123 MDMTSMQ-------GGLDALMEPELGH-----------KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 123 ~D~~~~~-------gtfD~Ii~~~~~~-----------~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+|+.+.. +.||+|+++.... .....++.++.++|+|||.+++.+...
T Consensus 278 ~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 278 DDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp SCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 9987753 5899999975211 236789999999999999999887653
No 224
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.95 E-value=1.4e-09 Score=110.53 Aligned_cols=112 Identities=14% Similarity=0.146 Sum_probs=85.8
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh-CC------CeEEEEeCCHHHHHHHHHHhccC------CCCc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA-GF------HGITNVDFSKVVISDMLRRNVRD------RSDM 118 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~-G~------~~VtgIDiS~~~I~~a~~r~~~~------~~~i 118 (759)
.+...+.+.+.. ...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.++++.... ..++
T Consensus 69 ~~~~~~~~~l~~-~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 147 (227)
T 1r18_A 69 HMHAFALEYLRD-HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQL 147 (227)
T ss_dssp HHHHHHHHHTTT-TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred HHHHHHHHHHHh-hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCce
Confidence 344445555531 1256789999999999999999874 42 36999999999999998876442 3579
Q ss_pred EEEEeecccCC---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 119 RWRVMDMTSMQ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 119 ~f~~~D~~~~~---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++.++|+.+.. ++||+|++....++ +++++.++|+|||++++....
T Consensus 148 ~~~~~d~~~~~~~~~~fD~I~~~~~~~~----~~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 148 LIVEGDGRKGYPPNAPYNAIHVGAAAPD----TPTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEESCGGGCCGGGCSEEEEEECSCBSS----CCHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCcccCCCcCCCccEEEECCchHH----HHHHHHHHhcCCCEEEEEEec
Confidence 99999998732 68999999775543 347889999999999988753
No 225
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.95 E-value=1.8e-09 Score=119.64 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=85.6
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCC--CcEEEEeecccCC-------CcccEEEeC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ-------GGLDALMEP 138 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~--~i~f~~~D~~~~~-------gtfD~Ii~~ 138 (759)
++.+|||+|||+|.++..++..|..+|+|+|+|+.+++.+++++...+. +++|+++|+.+.. ++||+|+++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 5789999999999999999998887899999999999999988765443 7899999987653 589999996
Q ss_pred CCCh-----------hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 139 ELGH-----------KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 139 ~~~~-----------~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.... .....++.++.++|+|||.+++.+...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 5221 226788999999999999999998754
No 226
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.95 E-value=1.5e-09 Score=114.33 Aligned_cols=101 Identities=21% Similarity=0.213 Sum_probs=82.5
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeecccC----CCcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM----QGGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~-----~~~~i~f~~~D~~~~----~gtfD~Ii~ 137 (759)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.+++++.. ..++++++++|+.+. .++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4679999999999999999887 566899999999999999987632 246899999998764 278999999
Q ss_pred CCCChhH------HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 138 PELGHKL------GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 138 ~~~~~~~------~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+...+.. ...+++++.++|+|||++++.+..
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 6533211 368999999999999999988543
No 227
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.95 E-value=2.7e-09 Score=108.10 Aligned_cols=112 Identities=9% Similarity=0.154 Sum_probs=85.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|+|.++.++...++ ..+|++||++|.+++.|++++ |+ .++++++.+|+.+++.....
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~l~~~~~------- 128 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL--QDKVTILNGASQDLIPQLKK------- 128 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC--GGGEEEEESCHHHHGGGTTT-------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC--CCceEEEECCHHHHHHHHHH-------
Confidence 567999999999999999998765 679999999999999999987 55 56899999999998766431
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
+.....||+|++|..... ..-..++++.+ +.|+|||+|++.-+..
T Consensus 129 --------------------~~~~~~fD~V~~d~~~~~----------~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 129 --------------------KYDVDTLDMVFLDHWKDR----------YLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp --------------------TSCCCCCSEEEECSCGGG----------HHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred --------------------hcCCCceEEEEEcCCccc----------chHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 011257999999753221 00123567777 9999999999864443
No 228
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.95 E-value=1.6e-09 Score=113.88 Aligned_cols=110 Identities=16% Similarity=0.045 Sum_probs=86.9
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC---
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--- 129 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~--- 129 (759)
.+...+.. .++.+|||+|||+|..+..+++. +...|+++|+|+.+++.++++....+ .+++++++|+.++.
T Consensus 74 l~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 74 IPPIVLNP---REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYL 150 (274)
T ss_dssp HHHHHHCC---CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred HHHHHhCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhh
Confidence 34445543 57789999999999999999884 43579999999999999988875543 47999999987652
Q ss_pred ----CcccEEEeCCCC------h--------------hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ----GGLDALMEPELG------H--------------KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ----gtfD~Ii~~~~~------~--------------~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.||+|+++... . .....+++++.++|||||++++.+.+
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 689999985211 0 12478999999999999999998864
No 229
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.95 E-value=5.2e-09 Score=114.10 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=84.2
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC-CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~-gtfD~Ii~~~~~~ 142 (759)
.+..+|||||||+|.++..+++... .+++++|+ +.+++.++++..... .+++++.+|+.+.+ ..+|+|++....+
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vlh 267 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEADAVLFCRILY 267 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCSEEEEESCGG
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCCEEEEechhc
Confidence 5678999999999999999998732 36999999 999999998875432 35999999998876 4459999977554
Q ss_pred h----HHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 143 K----LGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 143 ~----~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
. ....+++++.++|+|||+++++++..
T Consensus 268 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 268 SANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 3 27889999999999999999887643
No 230
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.94 E-value=1.6e-09 Score=107.81 Aligned_cols=160 Identities=10% Similarity=0.071 Sum_probs=92.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.+|+|+|.++..+....|..++++||+++.+++.|++.+..... +++++.+|+.+.+.....
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~---------- 97 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAE---------- 97 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHH----------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhh----------
Confidence 456799999999999999999998888999999999999999998854322 799999999997665210
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC-----------------hHHHHHHHHHccCcC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-----------------EGSFLLTVKDALSEQ 670 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~-----------------~~~fl~~~~~~L~~~ 670 (759)
...+||+|+.|.--... ..+...+.... -..+++.+++.|+||
T Consensus 98 -------------------~~~~fD~i~~npp~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 157 (215)
T 4dzr_A 98 -------------------RGRPWHAIVSNPPYIPT-GEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARG 157 (215)
T ss_dssp -------------------TTCCBSEEEECCCCCC-------------------------CTTHHHHHHHTCCGGGBCSS
T ss_pred -------------------ccCcccEEEECCCCCCC-ccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCC
Confidence 12579999996311000 00000001110 078899999999999
Q ss_pred cE-EEEEecCCChhHHHHHHHHHHHhcCceEEEeecCCccEEEEEecCC
Q 004354 671 GL-FIVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 718 (759)
Q Consensus 671 Gi-lv~N~~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~ 718 (759)
|. +++.+..........++..+..-|..+.......+...++++.+..
T Consensus 158 G~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 158 RAGVFLEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp SEEEEEECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred CeEEEEEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 99 7766644443333333332345576666666555667788887654
No 231
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.94 E-value=1.9e-09 Score=116.82 Aligned_cols=98 Identities=9% Similarity=0.099 Sum_probs=83.2
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCCCcccEEEeCCCChhHH
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQGGLDALMEPELGHKLG 145 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~gtfD~Ii~~~~~~~~~ 145 (759)
++.+|||+|||+|.++.. +. +..+|+|+|+|+.+++.+++++...+ .+++++++|+.+..+.||+|+++... ..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP~--~~ 270 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLPK--FA 270 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCTT--TG
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCcH--hH
Confidence 578999999999999999 77 56679999999999999999875544 47999999998876889999997432 23
Q ss_pred HHHHHHHHHhcccCcEEEEEEcCc
Q 004354 146 NQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 146 ~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
..++..+.++|+|||.+++.++..
T Consensus 271 ~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 271 HKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp GGGHHHHHHHEEEEEEEEEEEEES
T ss_pred HHHHHHHHHHcCCCCEEEEEEeec
Confidence 478999999999999999988765
No 232
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.94 E-value=1.8e-09 Score=114.92 Aligned_cols=101 Identities=13% Similarity=0.176 Sum_probs=80.7
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeecccCC----CcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQ----GGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~-----~~~~i~f~~~D~~~~~----gtfD~Ii~ 137 (759)
.+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++.. ..++++++++|+.+.. ++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 4579999999999999999887 456899999999999999887632 2468999999986632 78999998
Q ss_pred CCCChhH-------HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 138 PELGHKL-------GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 138 ~~~~~~~-------~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+...++. ...+++++.++|+|||++++.+..
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 5432211 278999999999999999997543
No 233
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.94 E-value=4.6e-09 Score=113.21 Aligned_cols=101 Identities=17% Similarity=0.115 Sum_probs=83.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC-CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ-GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~-gtfD~Ii~~~~~~ 142 (759)
.+..+|||+|||+|.++..+++... .+++++|+ +.+++.++++..... .+++|..+|+.+.. ..||+|++....|
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~~~~vlh 246 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVLSAVLH 246 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEEEESCGG
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEEEehhhc
Confidence 4467999999999999999988632 36999999 999999988875433 57999999997322 5899999987655
Q ss_pred hH----HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 143 KL----GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 143 ~~----~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
.. ..+++++++++|+|||++++.+..
T Consensus 247 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 276 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAAGSGGVVLVIEAV 276 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEeec
Confidence 32 588999999999999999998764
No 234
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.94 E-value=5.2e-09 Score=106.37 Aligned_cols=133 Identities=14% Similarity=0.154 Sum_probs=98.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
....||.||+|+|.++..+....|...|++||+++.+++.|++...-..-++++++.+|+.+++...-
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~------------ 101 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMI------------ 101 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHS------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHc------------
Confidence 45789999999999999999999999999999999999999988621112469999999999877532
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHHH
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 688 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 688 (759)
.+..||.|++..-.+.+ ........++..+|++.+.+.|+|||+|++-. ....+.+.+
T Consensus 102 ------------------~~~~~d~v~~~~~~p~~--~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t--d~~~~~~~~ 159 (218)
T 3dxy_A 102 ------------------PDNSLRMVQLFFPDPWH--KARHNKRRIVQVPFAELVKSKLQLGGVFHMAT--DWEPYAEHM 159 (218)
T ss_dssp ------------------CTTCEEEEEEESCCCCC--SGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE--SCHHHHHHH
T ss_pred ------------------CCCChheEEEeCCCCcc--chhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe--CCHHHHHHH
Confidence 13679999984322211 11111234566789999999999999998654 455555555
Q ss_pred HHHHHHh
Q 004354 689 ISRMKMV 695 (759)
Q Consensus 689 ~~~l~~v 695 (759)
...+...
T Consensus 160 ~~~~~~~ 166 (218)
T 3dxy_A 160 LEVMSSI 166 (218)
T ss_dssp HHHHHTS
T ss_pred HHHHHhC
Confidence 6666544
No 235
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.93 E-value=1.6e-09 Score=117.40 Aligned_cols=98 Identities=18% Similarity=0.283 Sum_probs=80.3
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeecccC----C-CcccEEE
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM----Q-GGLDALM 136 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~-----~~~~i~f~~~D~~~~----~-gtfD~Ii 136 (759)
.+.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++.. ..++++++++|+.+. . ++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 4679999999999999999876 345799999999999999987643 246899999998764 2 6899999
Q ss_pred eCCCChh-----H-HHHHHHHHHHhcccCcEEEEE
Q 004354 137 EPELGHK-----L-GNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 137 ~~~~~~~-----~-~~~~l~ei~rvLkpGG~liii 165 (759)
++...+. . ...+++++.++|+|||++++.
T Consensus 200 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 200 VDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp ECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 8643211 1 478999999999999999986
No 236
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.93 E-value=1.6e-09 Score=116.45 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=82.4
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc------CCCCcEEEEeecccC----CCcccEEE
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR------DRSDMRWRVMDMTSM----QGGLDALM 136 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~------~~~~i~f~~~D~~~~----~gtfD~Ii 136 (759)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.+++++.. ..++++++++|+.+. .++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4579999999999999999886 356799999999999999987642 146899999998774 27899999
Q ss_pred eCCCChh---H------HHHHHHHHHHhcccCcEEEEEEc
Q 004354 137 EPELGHK---L------GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 137 ~~~~~~~---~------~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+....+. . ...+++++.++|+|||++++...
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9654332 1 47899999999999999998753
No 237
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.93 E-value=2.8e-09 Score=109.62 Aligned_cols=98 Identities=14% Similarity=0.024 Sum_probs=80.6
Q ss_pred CCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC----------CCccc
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM----------QGGLD 133 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~----------~gtfD 133 (759)
+..+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++++...+ .+++++++|+.+. .++||
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 5679999999999999999886 2 2469999999999999998875443 3589999998653 26799
Q ss_pred EEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 134 ALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 134 ~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+|++... ......+++.+.++|+|||++++-.
T Consensus 150 ~I~~d~~-~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDAD-KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECSC-GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCc-hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9998753 3346789999999999999998764
No 238
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.93 E-value=3.2e-09 Score=114.07 Aligned_cols=111 Identities=14% Similarity=0.008 Sum_probs=86.9
Q ss_pred HHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC--
Q 004354 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~-- 129 (759)
..+...+.. .++.+|||+|||+|..+..+++.. ...|+++|+|+.+++.++++.... ..+++++++|+.+++
T Consensus 108 ~l~~~~l~~---~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 108 MYPPVALDP---KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGEL 184 (315)
T ss_dssp HHHHHHHCC---CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGG
T ss_pred HHHHHHhCC---CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccc
Confidence 334445543 577899999999999999999762 246999999999999999887543 347999999998865
Q ss_pred -CcccEEEeCCC------Chh------------------HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 -GGLDALMEPEL------GHK------------------LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 -gtfD~Ii~~~~------~~~------------------~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.||+|+++.. .+. ....+++++.++|||||++++.|..
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 68999998421 000 1268999999999999999998864
No 239
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.92 E-value=5.5e-09 Score=114.27 Aligned_cols=100 Identities=17% Similarity=0.095 Sum_probs=83.0
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc-CCCcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS-MQGGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~-~~gtfD~Ii~~~~~~ 142 (759)
.+..+|||||||+|.++..+++... .+++++|+ +.+++.++++..... .+++|+++|+.+ ++..||+|++....+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 259 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSFVLL 259 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEESCGG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEecccc
Confidence 5678999999999999999998742 36999999 999999998875433 379999999976 335599999977654
Q ss_pred hH----HHHHHHHHHHhcccCcEEEEEEc
Q 004354 143 KL----GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 143 ~~----~~~~l~ei~rvLkpGG~liiit~ 167 (759)
+. ...+++++.++|+|||++++.+.
T Consensus 260 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 260 NWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 32 45899999999999999999876
No 240
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.92 E-value=2.5e-09 Score=115.28 Aligned_cols=101 Identities=15% Similarity=0.211 Sum_probs=81.9
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeecccC----CCcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM----QGGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~-----~~~~i~f~~~D~~~~----~gtfD~Ii~ 137 (759)
.+.+|||+|||+|.++..+++. +..+|+++|+|+.+++.+++++.. ..++++++++|+.+. .++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999876 456799999999999999988643 146799999998764 278999998
Q ss_pred CCCCh----hH--HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 138 PELGH----KL--GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 138 ~~~~~----~~--~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+...+ .. ...+++++.++|+|||++++....
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 64221 11 278999999999999999987643
No 241
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.92 E-value=1e-08 Score=112.38 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=83.4
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeecccCC-CcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQ-GGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~--~~~i~f~~~D~~~~~-gtfD~Ii~~~~~~ 142 (759)
.+..+|||+|||+|.++..+++... .+++++|+ +.+++.++++.... ..+++|..+|+.+.. ..||+|++....+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v~~~~vlh 279 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVYLIKHVLH 279 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEEEEESCGG
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEEEhhhhhc
Confidence 4678999999999999999998732 26999999 99999999887543 357999999998432 5899999987654
Q ss_pred hH----HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 143 KL----GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 143 ~~----~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
.. ..+++++++++|+|||++++.+..
T Consensus 280 ~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 309 (369)
T 3gwz_A 280 DWDDDDVVRILRRIATAMKPDSRLLVIDNL 309 (369)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEEB
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 33 457999999999999999998754
No 242
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.92 E-value=2.2e-09 Score=115.23 Aligned_cols=99 Identities=14% Similarity=0.208 Sum_probs=78.7
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccC-----CCCcEEEEeecccC----CCcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSM----QGGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~-----~~~i~f~~~D~~~~----~gtfD~Ii~ 137 (759)
.+.+|||||||+|.++..+++. +..+|+++|+|+.+++.|++++... .++++++++|+.+. .++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 4579999999999999999876 3467999999999999999887432 46899999998764 278999998
Q ss_pred CCCChhH------HHHHHHHHHHhcccCcEEEEEE
Q 004354 138 PELGHKL------GNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 138 ~~~~~~~------~~~~l~ei~rvLkpGG~liiit 166 (759)
+...+.. ...+++++.++|+|||++++..
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 6532211 2789999999999999999875
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.91 E-value=3.3e-09 Score=125.69 Aligned_cols=117 Identities=16% Similarity=0.103 Sum_probs=93.2
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC---CCcEEEE
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR---SDMRWRV 122 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~---~~i~f~~ 122 (759)
||.+....+..+..+. ++.+|||+|||+|.++..++..|..+|+++|+|+.+++.+++++...+ .++++++
T Consensus 523 ~f~d~r~~r~~l~~~~------~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~ 596 (703)
T 3v97_A 523 LFLDHRIARRMLGQMS------KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQ 596 (703)
T ss_dssp CCGGGHHHHHHHHHHC------TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEE
T ss_pred CcccHHHHHHHHHHhc------CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEe
Confidence 4555555555565553 467999999999999999998888889999999999999999875543 3699999
Q ss_pred eecccCC----CcccEEEeCCCC-----------h--hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 123 MDMTSMQ----GGLDALMEPELG-----------H--KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 123 ~D~~~~~----gtfD~Ii~~~~~-----------~--~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+|+.+.. ++||+|+++... . .....++..+.++|+|||++++.+..
T Consensus 597 ~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 597 ADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9998742 789999996521 1 12678899999999999999977654
No 244
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.91 E-value=1.9e-09 Score=115.24 Aligned_cols=99 Identities=17% Similarity=0.269 Sum_probs=80.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeecccC----CCcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSM----QGGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~-----~~~~i~f~~~D~~~~----~gtfD~Ii~ 137 (759)
.+.+|||||||+|.++..+++.+ ..+|+++|+++.+++.+++++.. ..++++++++|+.+. .++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 45799999999999999998873 46799999999999999987643 257899999998763 278999998
Q ss_pred CCCChh------HHHHHHHHHHHhcccCcEEEEEE
Q 004354 138 PELGHK------LGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 138 ~~~~~~------~~~~~l~ei~rvLkpGG~liiit 166 (759)
+...+. ....+++++.++|+|||++++..
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 653321 13578999999999999999876
No 245
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.91 E-value=2.7e-09 Score=112.91 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=81.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccC-----CCCcEEEEeecccCC----CcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD-----RSDMRWRVMDMTSMQ----GGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~-----~~~i~f~~~D~~~~~----gtfD~Ii~ 137 (759)
.+.+|||+|||+|.++..+++.. ..+|+++|+++.+++.+++++... .++++++++|+.+.. ++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 45799999999999999998763 467999999999999999886432 468999999987642 78999999
Q ss_pred CCCChh----H--HHHHHHHHHHhcccCcEEEEEEc
Q 004354 138 PELGHK----L--GNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 138 ~~~~~~----~--~~~~l~ei~rvLkpGG~liiit~ 167 (759)
....+. . ...+++.+.++|+|||++++.+.
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 542221 1 27899999999999999998854
No 246
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.90 E-value=3.9e-09 Score=111.25 Aligned_cols=117 Identities=10% Similarity=0.070 Sum_probs=91.9
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEe
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVM 123 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~ 123 (759)
|+.....-+..+..++ .++.+|||+|||+|.++..++..|..+|+++|+||.+++.+++++...+ ..++++++
T Consensus 108 f~~~~~~er~ri~~~~-----~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~ 182 (278)
T 3k6r_A 108 FSPANVKERVRMAKVA-----KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM 182 (278)
T ss_dssp CCGGGHHHHHHHHHHC-----CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS
T ss_pred EcCCcHHHHHHHHHhc-----CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeC
Confidence 3444344445566665 3688999999999999999999887789999999999999998875543 45899999
Q ss_pred ecccCC--CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 124 DMTSMQ--GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 124 D~~~~~--gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
|+.++. +.||.|+++.... ...++..+.++|++||.+.+-.+..
T Consensus 183 D~~~~~~~~~~D~Vi~~~p~~--~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 183 DNRDFPGENIADRILMGYVVR--THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CTTTCCCCSCEEEEEECCCSS--GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred cHHHhccccCCCEEEECCCCc--HHHHHHHHHHHcCCCCEEEEEeeec
Confidence 999887 8899999875322 2467778889999999987766543
No 247
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.90 E-value=2.2e-09 Score=112.36 Aligned_cols=96 Identities=13% Similarity=0.160 Sum_probs=80.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhcc-----CCCCcEEEEeecccCCCcccEEEeCCCCh
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR-----DRSDMRWRVMDMTSMQGGLDALMEPELGH 142 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~-----~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~ 142 (759)
.+.+|||||||+|.++..+++.+ .+|+++|+++.+++.|++++.. ..++++++.+|+.+..++||+|++.....
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d~~dp 150 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQEPD 150 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEESSCCC
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEECCCCh
Confidence 45799999999999999998876 7899999999999988776532 24679999999877557899999975433
Q ss_pred hHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 143 KLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 143 ~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
..+++.+.++|+|||.+++...
T Consensus 151 ---~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 151 ---IHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp ---HHHHHHHHTTEEEEEEEEEEEE
T ss_pred ---HHHHHHHHHhcCCCcEEEEEcC
Confidence 3489999999999999998653
No 248
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.90 E-value=3.6e-09 Score=107.27 Aligned_cols=111 Identities=14% Similarity=0.034 Sum_probs=85.7
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~ 127 (759)
.....+..++.. .++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...+ .+++++++|+.+
T Consensus 56 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 132 (229)
T 2avd_A 56 EQAQLLANLARL---IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALE 132 (229)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHH
Confidence 334444444432 356799999999999999998752 3479999999999999998875443 479999999865
Q ss_pred CC---------CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 128 MQ---------GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 128 ~~---------gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
.. ++||+|++... ......+++++.++|+|||.+++..
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~-~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDAD-KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSC-STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhcCCCCCccEEEECCC-HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 41 47999999754 2335789999999999999998864
No 249
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.89 E-value=7.8e-09 Score=109.43 Aligned_cols=109 Identities=16% Similarity=0.204 Sum_probs=82.4
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSM 128 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~ 128 (759)
+.+...+...+.. .++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.++++..... ++++++++|+.+.
T Consensus 14 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAAL---RPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCC---CTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 3455556566544 5778999999999999999999866 69999999999999988874432 4799999999887
Q ss_pred C-CcccEEEeCCCChhH---HHHHHH--------------HH--HHhcccCcEEE
Q 004354 129 Q-GGLDALMEPELGHKL---GNQYLS--------------EV--KRLLKSGGKFV 163 (759)
Q Consensus 129 ~-gtfD~Ii~~~~~~~~---~~~~l~--------------ei--~rvLkpGG~li 163 (759)
+ ..||+|+++...++. ...++. ++ +++|+|||.++
T Consensus 90 ~~~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLPFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCCCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cchhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 6 789999996544332 223332 22 36899999863
No 250
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.89 E-value=1.7e-08 Score=99.47 Aligned_cols=94 Identities=21% Similarity=0.265 Sum_probs=73.5
Q ss_pred CCCCeEEEECCCcchhHHHHHHh-CC---------CeEEEEeCCHHHHHHHHHHhccCCCCcEEE-EeecccCC------
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDA-GF---------HGITNVDFSKVVISDMLRRNVRDRSDMRWR-VMDMTSMQ------ 129 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~-G~---------~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~-~~D~~~~~------ 129 (759)
.++.+|||+|||+|.++..+++. |. .+|+|+|+|+.+ ...+++++ ++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHHH
Confidence 46789999999999999999987 43 579999999831 12568899 89987642
Q ss_pred -----CcccEEEeCCC----ChhH---------HHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 130 -----GGLDALMEPEL----GHKL---------GNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 130 -----gtfD~Ii~~~~----~~~~---------~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
++||+|++... .++. ...+++++.++|+|||++++.++..+
T Consensus 91 ~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp HHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred HhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 48999998542 2221 25889999999999999999988654
No 251
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.89 E-value=2.1e-08 Score=102.62 Aligned_cols=126 Identities=13% Similarity=0.033 Sum_probs=91.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChhH
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHKL 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~~ 144 (759)
.+..+|||||||.|.++..+. +-..|+|+||++.+++.+++.....+.+..+.++|....+ ++||+++..-..|..
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHh
Confidence 457799999999999999877 4557999999999999999987766788999999988766 899999987543332
Q ss_pred ---HHHHHHHHHHhcccCcEEEEEE---cCch-----hhhhhhcccc--CCCceEEEEEeCCC
Q 004354 145 ---GNQYLSEVKRLLKSGGKFVCLT---LAES-----HVLGLLFPKF--RFGWKMSVHAIPQK 194 (759)
Q Consensus 145 ---~~~~l~ei~rvLkpGG~liiit---~~~~-----~~~~~l~~~~--~~~w~v~~~~~~~~ 194 (759)
.....-++...|+++|.++-.. .++. .....+++.. ...|.++-.+++++
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~nE 244 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTE 244 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEETTE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecCce
Confidence 2223337788999999888775 2221 1112222222 33788888888773
No 252
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.88 E-value=3.9e-09 Score=107.63 Aligned_cols=103 Identities=17% Similarity=0.284 Sum_probs=86.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
.+.+||.||.|.|.++..|...+|..+|++||+++.+++.|++.+ |+ .++++++.+|+.+++....
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~~~~~--------- 122 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGL--ESRIELLFGDALQLGEKLE--------- 122 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCGGGSHHHHT---------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECCHHHHHHhcc---------
Confidence 457999999999999999999988889999999999999999987 54 4689999999988765542
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
....||+|++|.... .-..+++.+.+.|+|||++++.
T Consensus 123 ---------------------~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 123 ---------------------LYPLFDVLFIDAAKG-------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp ---------------------TSCCEEEEEEEGGGS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ---------------------cCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 025799999976422 2268999999999999999986
No 253
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.88 E-value=2.8e-09 Score=114.15 Aligned_cols=101 Identities=15% Similarity=0.138 Sum_probs=81.4
Q ss_pred CCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhcc-CCCCcEEEEeecccC----C-CcccEEEeCCCC
Q 004354 69 PPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVR-DRSDMRWRVMDMTSM----Q-GGLDALMEPELG 141 (759)
Q Consensus 69 ~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~-~~~~i~f~~~D~~~~----~-gtfD~Ii~~~~~ 141 (759)
..+|||||||+|.++..+++. ...+|++||+++.+++.+++++.. ..++++++++|+.++ + ++||+|++....
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 359999999999999999984 223699999999999999988743 246899999998764 2 689999996422
Q ss_pred h-----hH-HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 142 H-----KL-GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 142 ~-----~~-~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+ .. ...++++++++|+|||+|++.....
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 1 11 3789999999999999999887643
No 254
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.88 E-value=7.5e-09 Score=112.66 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=83.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc-CCCcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS-MQGGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~-~~gtfD~Ii~~~~~~ 142 (759)
.+..+|||+|||+|.++..+++.+. ..++++|+ +.+++.++++..... .+++|+++|+.+ ++..||+|++....+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~ 260 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAIILSFVLL 260 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEEEESCGG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEEEccccc
Confidence 4678999999999999999998753 36999999 999999988875433 379999999976 335599999977554
Q ss_pred hH----HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 143 KL----GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 143 ~~----~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+. ...+++++.++|+|||++++.+..
T Consensus 261 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 261 NWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 32 468999999999999999998865
No 255
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.88 E-value=9.1e-09 Score=105.46 Aligned_cols=116 Identities=15% Similarity=0.274 Sum_probs=86.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
.+.+||.||.|.|.++..+...+| ..+|++||++|.+++.|++++ |+ +++++++.+|+.+++.......
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~~~~~~----- 132 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL--ENKIFLKLGSALETLQVLIDSK----- 132 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC--GGGEEEEESCHHHHHHHHHHCS-----
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHHHHHHHhhc-----
Confidence 457999999999999999999887 679999999999999999997 54 4579999999999876542100
Q ss_pred ccccccccccCCCCCCCCCCCCCC--CceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASN--ARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~--~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
. +......... ..||+|++|.... .-..+++.+.+.|+|||+|++..
T Consensus 133 ------------~-~~~~~~~f~~~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 133 ------------S-APSWASDFAFGPSSIDLFFLDADKE-------------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp ------------S-CCGGGTTTCCSTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ------------c-cccccccccCCCCCcCEEEEeCCHH-------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 0 0000001112 5799999974221 11578999999999999999865
No 256
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.87 E-value=1.6e-08 Score=105.47 Aligned_cols=159 Identities=14% Similarity=0.123 Sum_probs=106.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC---C-CCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF---T-QDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl---~-~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.||.|+|.++..|....|..+|++||+++.+++.|++.+.. . ..++++++.+|..++.......
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~----- 109 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA----- 109 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT-----
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh-----
Confidence 345699999999999999999999888999999999999999999753 2 2457999999998875432100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcC-CCCCCCCCCCcCCC---------CCChHHHHHHHHHccCcCcEE
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDV-DSPDSSSGMTCPAA---------DFVEGSFLLTVKDALSEQGLF 673 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~-~s~d~~~g~scPp~---------~f~~~~fl~~~~~~L~~~Gil 673 (759)
.....+||+|+.+. +.... +..+|.. ...-..+++.+.+.|+|||.|
T Consensus 110 ---------------------~~~~~~fD~Vv~nPPy~~~~--~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l 166 (260)
T 2ozv_A 110 ---------------------GLPDEHFHHVIMNPPYNDAG--DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQL 166 (260)
T ss_dssp ---------------------TCCTTCEEEEEECCCC-----------------------CCHHHHHHHHHHHEEEEEEE
T ss_pred ---------------------ccCCCCcCEEEECCCCcCCC--CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEE
Confidence 01136799999963 11100 0111110 011367999999999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHhcCceEEEee----cCCccEEEEEecC
Q 004354 674 IVNLVSRSQATKDMVISRMKMVFNHLFCLQL----EEDVNLVLFGLSS 717 (759)
Q Consensus 674 v~N~~~~~~~~~~~v~~~l~~vF~~v~~~~~----~~~~N~Vl~a~~~ 717 (759)
++-.. .. ....++..+++.|..+....+ ....+.+|+....
T Consensus 167 ~~~~~--~~-~~~~~~~~l~~~~~~~~i~~v~~~~~~~~~~~lv~~~k 211 (260)
T 2ozv_A 167 SLISR--PQ-SVAEIIAACGSRFGGLEITLIHPRPGEDAVRMLVTAIK 211 (260)
T ss_dssp EEEEC--GG-GHHHHHHHHTTTEEEEEEEEEESSTTSCCCEEEEEEEE
T ss_pred EEEEc--HH-HHHHHHHHHHhcCCceEEEEEcCCCCCCceEEEEEEEe
Confidence 88542 22 334567777776764433332 2346777776544
No 257
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.87 E-value=3.3e-09 Score=108.55 Aligned_cols=112 Identities=14% Similarity=0.023 Sum_probs=84.8
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC--CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeeccc
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG--FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTS 127 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G--~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~ 127 (759)
.....+..++.. .++.+|||+|||+|..+..+++.. -.+|+++|+|+.+++.++++....+ .+++++++|+.+
T Consensus 59 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 59 EQAQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 334444444332 356799999999999999998762 2369999999999999988764322 358999999754
Q ss_pred C-C--------CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEc
Q 004354 128 M-Q--------GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTL 167 (759)
Q Consensus 128 ~-~--------gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~ 167 (759)
. + ++||+|++... ......+++++.++|+|||++++...
T Consensus 136 ~l~~l~~~~~~~~fD~V~~d~~-~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 136 TLEQLTQGKPLPEFDLIFIDAD-KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp HHHHHHTSSSCCCEEEEEECSC-GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred HHHHHHhcCCCCCcCEEEECCC-HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 2 1 57999998754 33467899999999999999998654
No 258
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.86 E-value=1.6e-08 Score=97.78 Aligned_cols=126 Identities=11% Similarity=0.049 Sum_probs=91.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||.|.|.++..+...+|..++++||+++.+++.|++.+.-. ..+++ ++.+|+.+.+...
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~----------- 91 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV----------- 91 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC-----------
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc-----------
Confidence 3456999999999999999999888889999999999999999886221 23478 8889976543321
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHH
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 686 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~ 686 (759)
...||+|+++..- . ...+++.+.+.|+|||.++++...... ..
T Consensus 92 ---------------------~~~~D~i~~~~~~-----------~---~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~ 134 (178)
T 3hm2_A 92 ---------------------PDNPDVIFIGGGL-----------T---APGVFAAAWKRLPVGGRLVANAVTVES--EQ 134 (178)
T ss_dssp ---------------------CSCCSEEEECC-T-----------T---CTTHHHHHHHTCCTTCEEEEEECSHHH--HH
T ss_pred ---------------------CCCCCEEEECCcc-----------c---HHHHHHHHHHhcCCCCEEEEEeecccc--HH
Confidence 1579999973211 0 167999999999999999988754422 23
Q ss_pred HHHHHHHHhcCceEEE
Q 004354 687 MVISRMKMVFNHLFCL 702 (759)
Q Consensus 687 ~v~~~l~~vF~~v~~~ 702 (759)
.+...+++....+..+
T Consensus 135 ~~~~~~~~~~~~~~~~ 150 (178)
T 3hm2_A 135 MLWALRKQFGGTISSF 150 (178)
T ss_dssp HHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHcCCeeEEE
Confidence 4455555554444433
No 259
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.85 E-value=8.6e-09 Score=113.24 Aligned_cols=99 Identities=13% Similarity=0.084 Sum_probs=80.8
Q ss_pred CCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeeccc-CC----CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTS-MQ----GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~-~~----gtfD~Ii~~~~ 140 (759)
++.+|||+| |+|.++..++..+. .+|+++|+|+.+++.++++....+ .+++++++|+.+ ++ ++||+|+++..
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 568999999 99999999998876 579999999999999998875433 279999999988 54 58999999764
Q ss_pred Chh-HHHHHHHHHHHhcccCcEE-EEEEc
Q 004354 141 GHK-LGNQYLSEVKRLLKSGGKF-VCLTL 167 (759)
Q Consensus 141 ~~~-~~~~~l~ei~rvLkpGG~l-iiit~ 167 (759)
... ....+++++.++|+|||++ ++...
T Consensus 251 ~~~~~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 251 ETLEAIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp SSHHHHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CchHHHHHHHHHHHHHcccCCeEEEEEEe
Confidence 322 2688999999999999954 44443
No 260
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.85 E-value=7.9e-09 Score=110.16 Aligned_cols=88 Identities=17% Similarity=0.225 Sum_probs=67.3
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~ 129 (759)
+.+...+...+.. .++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.++++.... .++++++++|+.+.+
T Consensus 28 ~~i~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~ 103 (299)
T 2h1r_A 28 PGILDKIIYAAKI---KSSDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTV 103 (299)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCC
Confidence 4455556666654 5678999999999999999998854 6999999999999998886432 368999999999887
Q ss_pred -CcccEEEeCCCCh
Q 004354 130 -GGLDALMEPELGH 142 (759)
Q Consensus 130 -gtfD~Ii~~~~~~ 142 (759)
+.||+|+++...+
T Consensus 104 ~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 104 FPKFDVCTANIPYK 117 (299)
T ss_dssp CCCCSEEEEECCGG
T ss_pred cccCCEEEEcCCcc
Confidence 8899999975443
No 261
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.84 E-value=6.8e-09 Score=112.60 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=82.2
Q ss_pred CCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC----CcccEEEeCCCC
Q 004354 69 PPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ----GGLDALMEPELG 141 (759)
Q Consensus 69 ~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~----gtfD~Ii~~~~~ 141 (759)
..+|||||||+|.++..+++... .+++++|+ +.+++.++++..... .+++|+.+|+.+.+ +.||+|++....
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 78999999999999999998732 36999999 889999988765432 46999999998753 679999997765
Q ss_pred hhH----HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 142 HKL----GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 142 ~~~----~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
|+. ...++++++++|+|||++++....
T Consensus 259 h~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 532 589999999999999999998753
No 262
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.84 E-value=1.6e-09 Score=114.30 Aligned_cols=100 Identities=14% Similarity=0.053 Sum_probs=74.8
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhcc---CCCCcEEE--EeecccCC-CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVR---DRSDMRWR--VMDMTSMQ-GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~---~~~~i~f~--~~D~~~~~-gtfD~Ii~~~~ 140 (759)
.++.+|||+|||+|.++..+++. ..|+|+|+|+ ++..++++... ...++.|+ ++|+++++ ++||+|+|...
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIG 157 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCC
Confidence 56789999999999999999988 3599999999 53322211100 11168999 99999887 88999999643
Q ss_pred ---ChhH---H--HHHHHHHHHhcccCc--EEEEEEcCc
Q 004354 141 ---GHKL---G--NQYLSEVKRLLKSGG--KFVCLTLAE 169 (759)
Q Consensus 141 ---~~~~---~--~~~l~ei~rvLkpGG--~liiit~~~ 169 (759)
..+. . ..+++++.++|+||| .|++..+.+
T Consensus 158 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~ 196 (276)
T 2wa2_A 158 ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNP 196 (276)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCC
Confidence 1111 1 147899999999999 999988773
No 263
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.84 E-value=8.5e-09 Score=114.51 Aligned_cols=147 Identities=18% Similarity=0.215 Sum_probs=101.5
Q ss_pred hhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccc
Q 004354 50 WPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (759)
Q Consensus 50 ~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~ 127 (759)
...+...+.+.+.. .++.+|||+|||+|.++..+++. ...+++|+|+++.+++.| .+++++++|+.+
T Consensus 24 P~~l~~~~~~~~~~---~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~~~ 92 (421)
T 2ih2_A 24 PPEVVDFMVSLAEA---PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILADFLL 92 (421)
T ss_dssp CHHHHHHHHHHCCC---CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEESCGGG
T ss_pred CHHHHHHHHHhhcc---CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeCChhh
Confidence 35566677777653 35679999999999999999875 345799999999887654 468999999988
Q ss_pred CC--CcccEEEeCCCC--------------hhH-----------------HHHHHHHHHHhcccCcEEEEEEcCc-----
Q 004354 128 MQ--GGLDALMEPELG--------------HKL-----------------GNQYLSEVKRLLKSGGKFVCLTLAE----- 169 (759)
Q Consensus 128 ~~--gtfD~Ii~~~~~--------------~~~-----------------~~~~l~ei~rvLkpGG~liiit~~~----- 169 (759)
.. +.||+|+++... ... ...+++.+.++|+|||+++++....
T Consensus 93 ~~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~~ 172 (421)
T 2ih2_A 93 WEPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLE 172 (421)
T ss_dssp CCCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTCG
T ss_pred cCccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcCc
Confidence 76 789999996310 111 1267899999999999999987532
Q ss_pred --hhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCC
Q 004354 170 --SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 212 (759)
Q Consensus 170 --~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~ 212 (759)
..+++.+... ++ ..+..++ ..-.+......+++++|..
T Consensus 173 ~~~~lr~~l~~~---~~-~~i~~l~-~~F~~~~~~~~il~~~k~~ 212 (421)
T 2ih2_A 173 DFALLREFLARE---GK-TSVYYLG-EVFPQKKVSAVVIRFQKSG 212 (421)
T ss_dssp GGHHHHHHHHHH---SE-EEEEEEE-SCSTTCCCCEEEEEEESSS
T ss_pred cHHHHHHHHHhc---CC-eEEEECC-CCCCCCCccEEEEEEEeCC
Confidence 1223333222 44 4444443 1113455677788888754
No 264
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.84 E-value=2.1e-08 Score=98.71 Aligned_cols=108 Identities=12% Similarity=0.045 Sum_probs=84.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.+|+|+|.++..+... +..+|++||+|+.+++.|++.+....-++++++.+|+.+++....
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------------ 110 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT------------ 110 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc------------
Confidence 4578999999999998876664 556899999999999999998722111579999999999976543
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC---ChHHHHHHHHH--ccCcCcEEEEEecCC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF---VEGSFLLTVKD--ALSEQGLFIVNLVSR 680 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f---~~~~fl~~~~~--~L~~~Gilv~N~~~~ 680 (759)
..+||+|++|. |-.. .-..++..+.+ .|+|||+|++....+
T Consensus 111 -------------------~~~fD~i~~~~------------p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 111 -------------------TSPVDLVLADP------------PYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp -------------------SSCCSEEEECC------------CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred -------------------CCCccEEEECC------------CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 26799999953 2221 13678899988 999999999987554
No 265
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.84 E-value=8.7e-09 Score=102.73 Aligned_cols=117 Identities=15% Similarity=0.133 Sum_probs=91.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+....|..+|++||+++.+++.|++.+ |+ ++++++.+|+.+.+..
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~---------- 105 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA---RNVTLVEAFAPEGLDD---------- 105 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC---TTEEEEECCTTTTCTT----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeCChhhhhhc----------
Confidence 3457999999999999999999988889999999999999999886 54 5799999997654322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhH
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 684 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~ 684 (759)
...||+|+++.... .-..+++.+.+.|+|||.|++..... ..
T Consensus 106 -----------------------~~~~D~i~~~~~~~-------------~~~~~l~~~~~~LkpgG~l~~~~~~~--~~ 147 (204)
T 3e05_A 106 -----------------------LPDPDRVFIGGSGG-------------MLEEIIDAVDRRLKSEGVIVLNAVTL--DT 147 (204)
T ss_dssp -----------------------SCCCSEEEESCCTT-------------CHHHHHHHHHHHCCTTCEEEEEECBH--HH
T ss_pred -----------------------CCCCCEEEECCCCc-------------CHHHHHHHHHHhcCCCeEEEEEeccc--cc
Confidence 14699999954221 23689999999999999999986543 23
Q ss_pred HHHHHHHHHHh
Q 004354 685 KDMVISRMKMV 695 (759)
Q Consensus 685 ~~~v~~~l~~v 695 (759)
...+...+++.
T Consensus 148 ~~~~~~~l~~~ 158 (204)
T 3e05_A 148 LTKAVEFLEDH 158 (204)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 34455555554
No 266
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.82 E-value=3.2e-08 Score=96.58 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=100.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||+|.|.++..+... ..++++||+++.+++.|++.+ ++ .+.|++++.+|+.+.+.
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~~~~~~~~~~d~~~~~~------------ 116 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNL-DNYDIRVVHSDLYENVK------------ 116 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTC-TTSCEEEEECSTTTTCT------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCC-CccceEEEECchhcccc------------
Confidence 4579999999999999988887 569999999999999999987 43 12269999999765321
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
..+||+|+++.--. ...-....+++.+.+.|+|||.+++...... ..
T Consensus 117 ----------------------~~~~D~v~~~~~~~---------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~ 163 (194)
T 1dus_A 117 ----------------------DRKYNKIITNPPIR---------AGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ--GA 163 (194)
T ss_dssp ----------------------TSCEEEEEECCCST---------TCHHHHHHHHHHHHHHEEEEEEEEEEEESTH--HH
T ss_pred ----------------------cCCceEEEECCCcc---------cchhHHHHHHHHHHHHcCCCCEEEEEECCCC--Ch
Confidence 25799999842100 0001235799999999999999999886553 23
Q ss_pred HHHHHHHHHhcCceEEEeecCCccEEEEEe
Q 004354 686 DMVISRMKMVFNHLFCLQLEEDVNLVLFGL 715 (759)
Q Consensus 686 ~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~ 715 (759)
..+.+.+++.|..+..+.. .....++++.
T Consensus 164 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~ 192 (194)
T 1dus_A 164 KSLAKYMKDVFGNVETVTI-KGGYRVLKSK 192 (194)
T ss_dssp HHHHHHHHHHHSCCEEEEE-ETTEEEEEEE
T ss_pred HHHHHHHHHHhcceEEEec-CCcEEEEEEe
Confidence 4577888888988766653 3344555554
No 267
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.82 E-value=1.1e-08 Score=110.04 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=81.1
Q ss_pred CeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccC--CCCcEEEEeecccCC-CcccEEEeCCCChh--
Q 004354 70 PQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRD--RSDMRWRVMDMTSMQ-GGLDALMEPELGHK-- 143 (759)
Q Consensus 70 ~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~--~~~i~f~~~D~~~~~-gtfD~Ii~~~~~~~-- 143 (759)
.+|||+|||+|.++..+++.. ..+++++|+ +.+++.++++.... ..+++++.+|+.+.. +.||+|++....|.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~vl~~~~ 247 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYLLSRIIGDLD 247 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEEEESCGGGCC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEEEchhccCCC
Confidence 899999999999999998873 236999999 99999998876432 357999999997633 77999999876542
Q ss_pred --HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 144 --LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 144 --~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
....++++++++|+|||++++....
T Consensus 248 ~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 248 EAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2569999999999999999998754
No 268
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.82 E-value=2.2e-08 Score=100.70 Aligned_cols=129 Identities=17% Similarity=0.242 Sum_probs=93.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||+|+|.++..+....|..++++||+++.+++.|++.. |+ ++++++.+|+.++.....
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~--------- 108 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV---PNIKLLWVDGSDLTDYFE--------- 108 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---SSEEEEECCSSCGGGTSC---------
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC---CCEEEEeCCHHHHHhhcC---------
Confidence 457899999999999999999999899999999999999999886 44 579999999876321121
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
...||+|+++...+... ..-.+..+....+++.+.+.|+|||+|++.. ......
T Consensus 109 ----------------------~~~~D~i~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~--~~~~~~ 162 (214)
T 1yzh_A 109 ----------------------DGEIDRLYLNFSDPWPK--KRHEKRRLTYKTFLDTFKRILPENGEIHFKT--DNRGLF 162 (214)
T ss_dssp ----------------------TTCCSEEEEESCCCCCS--GGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE--SCHHHH
T ss_pred ----------------------CCCCCEEEEECCCCccc--cchhhhccCCHHHHHHHHHHcCCCcEEEEEe--CCHHHH
Confidence 35799999964221100 0000112345789999999999999999864 334444
Q ss_pred HHHHHHHHHh
Q 004354 686 DMVISRMKMV 695 (759)
Q Consensus 686 ~~v~~~l~~v 695 (759)
..+++.+.+.
T Consensus 163 ~~~~~~~~~~ 172 (214)
T 1yzh_A 163 EYSLVSFSQY 172 (214)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHC
Confidence 5555555543
No 269
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.81 E-value=3.7e-08 Score=99.43 Aligned_cols=132 Identities=11% Similarity=0.130 Sum_probs=94.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..|....|..++++||+++.+++.|++...-..-++++++.+|+.++.....
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~------------ 105 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE------------ 105 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC------------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC------------
Confidence 45789999999999999999999999999999999999999988621112469999999988533222
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHHH
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 688 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 688 (759)
...||.|++....+.... .--...+....+++.+.+.|+|||.|++-. ........+
T Consensus 106 -------------------~~~~d~v~~~~~~p~~~~--~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t--d~~~~~~~~ 162 (213)
T 2fca_A 106 -------------------PGEVKRVYLNFSDPWPKK--RHEKRRLTYSHFLKKYEEVMGKGGSIHFKT--DNRGLFEYS 162 (213)
T ss_dssp -------------------TTSCCEEEEESCCCCCSG--GGGGGSTTSHHHHHHHHHHHTTSCEEEEEE--SCHHHHHHH
T ss_pred -------------------cCCcCEEEEECCCCCcCc--cccccccCcHHHHHHHHHHcCCCCEEEEEe--CCHHHHHHH
Confidence 256999988432221100 000122456899999999999999999764 344445555
Q ss_pred HHHHHHh
Q 004354 689 ISRMKMV 695 (759)
Q Consensus 689 ~~~l~~v 695 (759)
+..+.+.
T Consensus 163 ~~~~~~~ 169 (213)
T 2fca_A 163 LKSFSEY 169 (213)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 6666554
No 270
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.80 E-value=4.3e-08 Score=110.19 Aligned_cols=162 Identities=13% Similarity=0.160 Sum_probs=110.1
Q ss_pred ccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--------------CCCeEEEEeCCHHHHHHHHHH
Q 004354 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------------GFHGITNVDFSKVVISDMLRR 110 (759)
Q Consensus 45 eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--------------G~~~VtgIDiS~~~I~~a~~r 110 (759)
++|.+ ..+...+.+.+.. .++.+|||+|||+|.++..+++. ...+++|+|+++.+++.|+.+
T Consensus 152 ~fyTP-~~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 152 QYFTP-RPLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp GGCCC-HHHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred cccCc-HHHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 34433 4566677777754 56779999999999999888764 123599999999999998877
Q ss_pred hccCCC---CcEEEEeecccCC--CcccEEEeCCCChh-------------------HHHHHHHHHHHhcccCcEEEEEE
Q 004354 111 NVRDRS---DMRWRVMDMTSMQ--GGLDALMEPELGHK-------------------LGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 111 ~~~~~~---~i~f~~~D~~~~~--gtfD~Ii~~~~~~~-------------------~~~~~l~ei~rvLkpGG~liiit 166 (759)
+...+. +.++.++|....+ +.||+|++++.... ....++..+.+.|+|||+++++.
T Consensus 228 l~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 228 LYLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp HHHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 643332 6789999988766 68999999752110 02478999999999999999887
Q ss_pred cCc--------hhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCCC
Q 004354 167 LAE--------SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 213 (759)
Q Consensus 167 ~~~--------~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~~ 213 (759)
... ..+++.+++.. +...+..++..--...+.+..+++++|.++
T Consensus 308 p~~~L~~~~~~~~iR~~L~~~~---~l~~ii~lp~~~F~~t~v~t~Il~~~k~~~ 359 (445)
T 2okc_A 308 PDNVLFEAGAGETIRKRLLQDF---NLHTILRLPTGIFYAQGVKANVLFFSKGQP 359 (445)
T ss_dssp EHHHHHCSTHHHHHHHHHHHHE---EEEEEEECCSSSSSSTTCCEEEEEEEESSC
T ss_pred CCcccccCcHHHHHHHHHHhcC---cEEEEEeCCCCCccCCCCCEEEEEEECCCC
Confidence 321 12333344332 222233333321124567889999998765
No 271
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.80 E-value=2e-08 Score=105.27 Aligned_cols=101 Identities=18% Similarity=0.079 Sum_probs=78.2
Q ss_pred CCeEEEECCCc--chhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC---------Cccc-
Q 004354 69 PPQILVPGCGN--SRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ---------GGLD- 133 (759)
Q Consensus 69 ~~~ILDlGCG~--G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~---------gtfD- 133 (759)
-.+|||||||+ +.++..++.. .-.+|+++|.|+.|++.+++++.... .+++|+++|+.++. ++||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 36899999997 4444545443 22469999999999999999875432 36899999998852 5577
Q ss_pred ----EEEeCCCChhH-----HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 134 ----ALMEPELGHKL-----GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 134 ----~Ii~~~~~~~~-----~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
+|+++...|+. ...+++++.+.|+|||+|++.++..
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~ 203 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTA 203 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECC
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccC
Confidence 67777766654 4689999999999999999998764
No 272
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.80 E-value=1.9e-09 Score=113.08 Aligned_cols=99 Identities=12% Similarity=0.024 Sum_probs=73.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhc---cCCCCcEEE--EeecccCC-CcccEEEeCCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNV---RDRSDMRWR--VMDMTSMQ-GGLDALMEPEL 140 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~---~~~~~i~f~--~~D~~~~~-gtfD~Ii~~~~ 140 (759)
.++.+|||||||+|.++..+++. ..|+|+|+|+ ++..++++.. ....++.|+ ++|+++++ ++||+|+|...
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~ 149 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVG 149 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCc
Confidence 56789999999999999999887 4599999999 4322211100 011168999 99999887 88999999643
Q ss_pred ---ChhH---H--HHHHHHHHHhcccCc--EEEEEEcC
Q 004354 141 ---GHKL---G--NQYLSEVKRLLKSGG--KFVCLTLA 168 (759)
Q Consensus 141 ---~~~~---~--~~~l~ei~rvLkpGG--~liiit~~ 168 (759)
..+. . ..++..+.++|+||| .|++-.+.
T Consensus 150 ~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 1111 1 137899999999999 99998877
No 273
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.80 E-value=1.5e-08 Score=104.60 Aligned_cols=126 Identities=13% Similarity=0.057 Sum_probs=95.1
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--CcccEEEeCCCChhH
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--GGLDALMEPELGHKL 144 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--gtfD~Ii~~~~~~~~ 144 (759)
+..+|||||||+|-++..++.. +-..|+++|+++.+++.+++++...+...++.+.|..... +.||++++.-..+..
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~L 211 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCL 211 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHHh
Confidence 4679999999999999988776 4457999999999999999998777778899999986655 899999997755544
Q ss_pred ----HHHHHHHHHHhcccCcEEEEEEc---C--chhhhh---hhcccc--CCCceEEEEEeCCC
Q 004354 145 ----GNQYLSEVKRLLKSGGKFVCLTL---A--ESHVLG---LLFPKF--RFGWKMSVHAIPQK 194 (759)
Q Consensus 145 ----~~~~l~ei~rvLkpGG~liiit~---~--~~~~~~---~l~~~~--~~~w~v~~~~~~~~ 194 (759)
....+ ++...|+++|.++.... + .+.+.. ..++.. ..+|.++-.+++++
T Consensus 212 e~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~nE 274 (281)
T 3lcv_B 212 ETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGNE 274 (281)
T ss_dssp HHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred hhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecCe
Confidence 23455 89999999999887754 2 122222 222221 23899888888774
No 274
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.79 E-value=9.2e-09 Score=106.27 Aligned_cols=114 Identities=11% Similarity=0.021 Sum_probs=77.6
Q ss_pred hhHHHHHHhhcCCCC--CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecc
Q 004354 52 QLRDPLISLIGAPTS--SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMT 126 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~--~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~ 126 (759)
.....+...+..... .++.+|||+|||+|.++..++... ..+|+|+|+|+.+++.|+++..... .+++++++|+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 126 (254)
T 2h00_A 47 NYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQK 126 (254)
T ss_dssp HHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred HHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchh
Confidence 334444455543211 146799999999999999888762 2469999999999999998875443 24999999976
Q ss_pred cC-----C----CcccEEEeCCCChhH-----------------HHHHHHHHHHhcccCcEEEEE
Q 004354 127 SM-----Q----GGLDALMEPELGHKL-----------------GNQYLSEVKRLLKSGGKFVCL 165 (759)
Q Consensus 127 ~~-----~----gtfD~Ii~~~~~~~~-----------------~~~~l~ei~rvLkpGG~liii 165 (759)
+. + ++||+|+++...+.. ...++.+++++|||||.+.++
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 52 2 379999997422111 234678889999999987655
No 275
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.79 E-value=9.9e-09 Score=113.12 Aligned_cols=101 Identities=14% Similarity=0.087 Sum_probs=83.3
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC-------CcccEEEeCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-------GGLDALMEPE 139 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~-------gtfD~Ii~~~ 139 (759)
++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|++++...+ .+++|+++|+.+.. ++||+|+++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 4579999999999999999988 5579999999999999998875443 45999999987753 5899999965
Q ss_pred CCh-----------hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 140 LGH-----------KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 140 ~~~-----------~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
... .....++.++.++|+|||.+++.+...
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 210 226788999999999999999988653
No 276
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.79 E-value=1.5e-08 Score=103.47 Aligned_cols=108 Identities=10% Similarity=0.000 Sum_probs=81.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|+|.++..|.... ..++++||+++.+++.|+++..-. ..+++++.+|+.+.+....
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~------------ 125 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAP-IDEHWIIECNDGVFQRLRDWAPRQ-THKVIPLKGLWEDVAPTLP------------ 125 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSC-EEEEEEEECCHHHHHHHHHHGGGC-SSEEEEEESCHHHHGGGSC------------
T ss_pred CCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcCCHHHHHHHHHHHHhc-CCCeEEEecCHHHhhcccC------------
Confidence 45799999999999999986653 348999999999999999987432 3679999999988754432
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC-hHHHHHHHHHccCcCcEEEE
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-EGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~-~~~fl~~~~~~L~~~Gilv~ 675 (759)
+..||+|++|.+.. . .+..+.. -..+++.+++.|+|||.|++
T Consensus 126 -------------------~~~fD~V~~d~~~~-~-----~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 126 -------------------DGHFDGILYDTYPL-S-----EETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp -------------------TTCEEEEEECCCCC-B-----GGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred -------------------CCceEEEEECCccc-c-----hhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 36799999975442 1 1111111 13579999999999999885
No 277
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.78 E-value=1.8e-08 Score=109.35 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=75.2
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhc--cCCCCcEEEEeecc-cCCCcccEEEeCCCCh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNV--RDRSDMRWRVMDMT-SMQGGLDALMEPELGH 142 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~--~~~~~i~f~~~D~~-~~~gtfD~Ii~~~~~~ 142 (759)
.+..+|||||||+|.++..+++... ..++++|+++ ++. +++.. ....+++|+.+|+. ..+ .||+|++....|
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~~~~~~~~~~~~v~~~~~d~~~~~p-~~D~v~~~~vlh 258 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--RHRLDAPDVAGRWKVVEGDFLREVP-HADVHVLKRILH 258 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--TCCCCCGGGTTSEEEEECCTTTCCC-CCSEEEEESCGG
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--cccccccCCCCCeEEEecCCCCCCC-CCcEEEEehhcc
Confidence 5678999999999999999998743 2589999954 443 22221 12356999999995 344 899999987655
Q ss_pred hH----HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 143 KL----GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 143 ~~----~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+. ...++++++++|||||++++.+..
T Consensus 259 ~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 259 NWGDEDSVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp GSCHHHHHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 33 469999999999999999998753
No 278
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.77 E-value=2e-08 Score=97.52 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=84.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.+|.|.|.++..+... +..+|++||+++.+++.|++.+... ..++++++.+|+.+++....
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~----------- 98 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT----------- 98 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC-----------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc-----------
Confidence 4579999999999999888877 5679999999999999999987322 13579999999999876532
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCC-CCChHHHHHHHH--HccCcCcEEEEEecCCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA-DFVEGSFLLTVK--DALSEQGLFIVNLVSRS 681 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~-~f~~~~fl~~~~--~~L~~~Gilv~N~~~~~ 681 (759)
..||+|++|. |- .....++++.+. +.|+|||++++......
T Consensus 99 ---------------------~~fD~i~~~~------------~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 99 ---------------------GRFDLVFLDP------------PYAKETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp ---------------------SCEEEEEECC------------SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ---------------------CCCCEEEECC------------CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 4699999852 11 112367788887 89999999999876554
No 279
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.77 E-value=4.2e-08 Score=101.11 Aligned_cols=122 Identities=20% Similarity=0.311 Sum_probs=95.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.+|+|.|.++..+... .|..++++||++|.+++.|++.+ |+ .++++++.+|+.+. ..
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~------- 159 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF--DDRVTIKLKDIYEG---IE------- 159 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC--TTTEEEECSCGGGC---CC-------
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC--CCceEEEECchhhc---cC-------
Confidence 45579999999999999998888 67889999999999999999987 65 56799999998743 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChh
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 683 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~ 683 (759)
...||+|++|... | ..+++.+.+.|+|||.+++...+ ..
T Consensus 160 ------------------------~~~~D~v~~~~~~---------~------~~~l~~~~~~L~~gG~l~~~~~~--~~ 198 (255)
T 3mb5_A 160 ------------------------EENVDHVILDLPQ---------P------ERVVEHAAKALKPGGFFVAYTPC--SN 198 (255)
T ss_dssp ------------------------CCSEEEEEECSSC---------G------GGGHHHHHHHEEEEEEEEEEESS--HH
T ss_pred ------------------------CCCcCEEEECCCC---------H------HHHHHHHHHHcCCCCEEEEEECC--HH
Confidence 2569999996421 1 46899999999999999987643 33
Q ss_pred HHHHHHHHHHHh---cCceEEE
Q 004354 684 TKDMVISRMKMV---FNHLFCL 702 (759)
Q Consensus 684 ~~~~v~~~l~~v---F~~v~~~ 702 (759)
....+.+.+++. |..+-.+
T Consensus 199 ~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 199 QVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp HHHHHHHHHHHTGGGBSCCEEE
T ss_pred HHHHHHHHHHHcCCCccccEEE
Confidence 344566777665 7765444
No 280
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.77 E-value=3.2e-08 Score=102.77 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=98.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.||+|+|.++..+....+. +|++||+++.+++.|++.+... ..++++++.+|+.++.....
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~----------- 116 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIP----------- 116 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSC-----------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhc-----------
Confidence 4679999999999999999988655 9999999999999999987321 24689999999988754322
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCC-CCCCCCCCcCCCC---------CChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAAD---------FVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s-~d~~~g~scPp~~---------f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..+||+|+.|.-- .....+..+|... ..-..+++.+.+.|+|||.|++-.
T Consensus 117 --------------------~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 117 --------------------KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp --------------------TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------------------cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 3679999996311 0001122222111 012479999999999999999833
Q ss_pred cCCChhHHHHHHHHHHHh-cCce--EEEe--ecCCccEEEEEecC
Q 004354 678 VSRSQATKDMVISRMKMV-FNHL--FCLQ--LEEDVNLVLFGLSS 717 (759)
Q Consensus 678 ~~~~~~~~~~v~~~l~~v-F~~v--~~~~--~~~~~N~Vl~a~~~ 717 (759)
+... ...++..+++. |.-. ..+. .....+.+++....
T Consensus 177 --~~~~-~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k 218 (259)
T 3lpm_A 177 --RPER-LLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIK 218 (259)
T ss_dssp --CTTT-HHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEE
T ss_pred --cHHH-HHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEe
Confidence 2222 23456666653 3322 1121 12345677765443
No 281
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.76 E-value=2.6e-08 Score=102.14 Aligned_cols=119 Identities=12% Similarity=0.152 Sum_probs=88.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|+|.++..|....|..+|++||+++.+++.|++.+ |+ ++++++.+|+.++.....
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~--------- 137 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQL---ENTTFCHDRAETFGQRKD--------- 137 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEESCHHHHTTCTT---------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCEEEEeccHHHhccccc---------
Confidence 457999999999999888888888889999999999999999875 55 359999999987631100
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
...+||+|+.+... --..+++.+.+.|+|||.|++-.........
T Consensus 138 ---------------------~~~~fD~V~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~ 182 (240)
T 1xdz_A 138 ---------------------VRESYDIVTARAVA--------------RLSVLSELCLPLVKKNGLFVALKAASAEEEL 182 (240)
T ss_dssp ---------------------TTTCEEEEEEECCS--------------CHHHHHHHHGGGEEEEEEEEEEECC-CHHHH
T ss_pred ---------------------ccCCccEEEEeccC--------------CHHHHHHHHHHhcCCCCEEEEEeCCCchHHH
Confidence 02579999986521 0268999999999999999886433333333
Q ss_pred HHHHHHHHH
Q 004354 686 DMVISRMKM 694 (759)
Q Consensus 686 ~~v~~~l~~ 694 (759)
..+...++.
T Consensus 183 ~~~~~~l~~ 191 (240)
T 1xdz_A 183 NAGKKAITT 191 (240)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444444
No 282
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.75 E-value=2.4e-08 Score=111.52 Aligned_cols=98 Identities=16% Similarity=0.152 Sum_probs=76.2
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-CcccEEEeCCCChhHH
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-GGLDALMEPELGHKLG 145 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-gtfD~Ii~~~~~~~~~ 145 (759)
.++.+|||+|||+|.++..|++.+. +|+|+|+|+.+++.|++++...+..++|+++|+.++. ..||+|+++.......
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dPPr~g~~ 367 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAGLH 367 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECCCTTCSC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcCCccchH
Confidence 4678999999999999999998754 6999999999999999887543323999999998876 5899999976422222
Q ss_pred HHHHHHHHHhcccCcEEEEEE
Q 004354 146 NQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 146 ~~~l~ei~rvLkpGG~liiit 166 (759)
..+++.+. .|+|||.+++..
T Consensus 368 ~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 368 PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp HHHHHHHH-HHCCSEEEEEES
T ss_pred HHHHHHHH-hcCCCcEEEEEC
Confidence 34555554 489999877653
No 283
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.74 E-value=2.3e-08 Score=111.87 Aligned_cols=113 Identities=16% Similarity=0.159 Sum_probs=88.8
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC--
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~-- 129 (759)
....+...+.. .++.+|||+|||+|..+..+++.+. ..|+++|+|+.+++.++++....+.++.++++|+.+..
T Consensus 234 ~s~~~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~ 310 (429)
T 1sqg_A 234 SAQGCMTWLAP---QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW 310 (429)
T ss_dssp HHHTHHHHHCC---CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH
T ss_pred HHHHHHHHcCC---CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhh
Confidence 33444455543 5788999999999999999998743 47999999999999999987665557899999998764
Q ss_pred ---CcccEEEeCC----CCh--------------------hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ---GGLDALMEPE----LGH--------------------KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ---gtfD~Ii~~~----~~~--------------------~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.||+|+++. ... .....+++++.++|||||++++.+.+
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6899999632 100 01258899999999999999998854
No 284
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.73 E-value=1.7e-08 Score=113.63 Aligned_cols=111 Identities=15% Similarity=0.172 Sum_probs=86.3
Q ss_pred HHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC---
Q 004354 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ--- 129 (759)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~--- 129 (759)
..+...+.. .++.+|||+|||+|..+..+++. +-..|+++|+|+.+++.+++++...+..+.++++|+.++.
T Consensus 91 ~l~a~~L~~---~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 91 QAVGVLLDP---KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHH
T ss_pred HHHHHhcCc---CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhc
Confidence 344455544 57889999999999999999876 2236999999999999999887654333899999987764
Q ss_pred -CcccEEEeCCC----C--------h------------hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 -GGLDALMEPEL----G--------H------------KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 -gtfD~Ii~~~~----~--------~------------~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++||+|+++.. . . .....+++++.++|||||++++.|.+
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 78999996321 0 0 01378999999999999999998764
No 285
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.73 E-value=4.9e-08 Score=102.01 Aligned_cols=102 Identities=11% Similarity=0.205 Sum_probs=78.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC--CCCcEEEEEcCHHHHHHHHhhc-CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM--PFVGIEAVELDLTMLNLAEDYF-GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~--p~~~i~~VEiDp~v~~vA~~~F-gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|+|.++..|.+.+ |+.+|++||++|.|++.|++.+ ......+++++.+|+.++ .
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~----~-------- 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI----A-------- 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC----C--------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc----c--------
Confidence 345799999999999999888876 4569999999999999999986 222356899999996543 2
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC----hHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV----EGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~----~~~fl~~~~~~L~~~Gilv~N 676 (759)
...||+|++-. .-+++ -..+|+.+++.|+|||+|++-
T Consensus 137 -----------------------~~~~d~v~~~~------------~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 137 -----------------------IENASMVVLNF------------TLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -----------------------CCSEEEEEEES------------CGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------------ccccccceeee------------eeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 24699998711 11222 135899999999999998874
No 286
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.72 E-value=8e-08 Score=97.34 Aligned_cols=156 Identities=11% Similarity=0.105 Sum_probs=100.1
Q ss_pred CCCCeEEEEccc-ccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLG-AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG-~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||+| +|.++..+.... ..+|++||+++.+++.|++.+....- +++++.+|+..+ ...
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-~~~----------- 119 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGII-KGV----------- 119 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSS-TTT-----------
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhh-hhc-----------
Confidence 355799999999 999999888875 56999999999999999988732111 799999996422 111
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCC-CCCCCCCcCCC-------C-CChHHHHHHHHHccCcCcEEEEEe
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSP-DSSSGMTCPAA-------D-FVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~-d~~~g~scPp~-------~-f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
...+||+|+.|.--. ........|.. . -.-..+++.+.+.|+|||.|++.+
T Consensus 120 --------------------~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 120 --------------------VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp --------------------CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --------------------ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 136799999863110 00000000000 0 012789999999999999999876
Q ss_pred cCCChhHHHHHHHHHHHhcCceEEEeecC--CccEEEEEecCC
Q 004354 678 VSRSQATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGLSSE 718 (759)
Q Consensus 678 ~~~~~~~~~~v~~~l~~vF~~v~~~~~~~--~~N~Vl~a~~~~ 718 (759)
..+. .....+.+.+.+..-.+..++... ....++...+.+
T Consensus 180 ~~~~-~~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~~~~ 221 (230)
T 3evz_A 180 PDKE-KLLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIFFKGI 221 (230)
T ss_dssp ESCH-HHHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEEECCC
T ss_pred cccH-hHHHHHHHHHHHcCCceEEEEecCCCeEEEEEEEeccc
Confidence 4432 344556777776644555555433 345555555443
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.72 E-value=2.5e-08 Score=104.02 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=100.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-------CCC-----CcEEEEEcCH--------------HHHHHHHhhcC-------
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHEC-------MPF-----VGIEAVELDL--------------TMLNLAEDYFG------- 574 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~-------~p~-----~~i~~VEiDp--------------~v~~vA~~~Fg------- 574 (759)
..+.+||.||.|+|.....+... .|. .++++||.+| .+.++|++.+.
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 45679999999999665554332 563 5899999998 34446666532
Q ss_pred ------CC-CCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCC
Q 004354 575 ------FT-QDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGM 647 (759)
Q Consensus 575 ------l~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~ 647 (759)
+. ...+++++.+|+.+.+..... .....||+|++|.+++..
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~----------------------------~~~~~~D~iflD~fsp~~---- 186 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDD----------------------------SLNQKVDAWFLDGFAPAK---- 186 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCG----------------------------GGTTCEEEEEECSSCTTT----
T ss_pred chhheeccCCceEEEEEECcHHHHHhhccc----------------------------ccCCeEEEEEECCCCccc----
Confidence 21 124688999999999877531 001379999999987632
Q ss_pred CcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHHHHHHHHHh-cCceEEEeecCCccEEEEEecCC
Q 004354 648 TCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 718 (759)
Q Consensus 648 scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~~~ 718 (759)
.+.+.+.++|+.+.++|+|||+|+. ++.... +...|++. |. +...+-...-..++.+.+..
T Consensus 187 ---~p~lw~~~~l~~l~~~L~pGG~l~t--ysaa~~----vrr~L~~aGF~-v~~~~g~~~kr~m~~a~~~~ 248 (257)
T 2qy6_A 187 ---NPDMWTQNLFNAMARLARPGGTLAT--FTSAGF----VRRGLQEAGFT-MQKRKGFGRKREMLCGVMEQ 248 (257)
T ss_dssp ---CGGGCCHHHHHHHHHHEEEEEEEEE--SCCBHH----HHHHHHHHTEE-EEEECCSTTCCCEEEEEEC-
T ss_pred ---ChhhcCHHHHHHHHHHcCCCcEEEE--EeCCHH----HHHHHHHCCCE-EEeCCCCCCCCceEEEEecC
Confidence 4478899999999999999999993 454444 34445555 54 44444333445677776554
No 288
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.71 E-value=4.1e-08 Score=110.54 Aligned_cols=111 Identities=17% Similarity=0.168 Sum_probs=86.6
Q ss_pred HHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC--
Q 004354 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~-- 129 (759)
..+...+.. .++.+|||+|||+|..+..++.. +...|+++|+|+.+++.++++....+ .+++++++|+.+.+
T Consensus 249 ~l~~~~l~~---~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 249 AVASIVLDP---KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS
T ss_pred HHHHHhcCC---CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh
Confidence 344455543 57789999999999999999885 22469999999999999988875543 47999999998764
Q ss_pred ---CcccEEEeCC----CCh--------h------------HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ---GGLDALMEPE----LGH--------K------------LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ---gtfD~Ii~~~----~~~--------~------------~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.||+|+++. ... + ....+++++.++|||||++++.|+.
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 6799999632 100 0 0267899999999999999998875
No 289
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.71 E-value=1.9e-08 Score=110.24 Aligned_cols=96 Identities=20% Similarity=0.168 Sum_probs=77.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCCcccEEEeCCCChhH-
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQGGLDALMEPELGHKL- 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~~~- 144 (759)
.+..+|||||||+|.++..+++.+. ..++++|+ +.+++.+++ .++++++.+|+.+....||+|++....|+.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP-----LSGIEHVGGDMFASVPQGDAMILKAVCHNWS 281 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----CTTEEEEECCTTTCCCCEEEEEEESSGGGSC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh-----cCCCEEEeCCcccCCCCCCEEEEecccccCC
Confidence 4568999999999999999998853 25888999 888865532 357999999997732449999998765533
Q ss_pred ---HHHHHHHHHHhcccCcEEEEEEcC
Q 004354 145 ---GNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 145 ---~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
...++++++++|+|||++++.++.
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 449999999999999999998753
No 290
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.70 E-value=6.2e-08 Score=99.54 Aligned_cols=133 Identities=14% Similarity=0.129 Sum_probs=91.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC------CCCCCCeEEEEccHHHHHHhhcccCcc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG------FTQDKSLKVHITDGIKFVREMKSSSAT 601 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg------l~~~~rl~v~i~Da~~~l~~~~~~~~~ 601 (759)
....+||.||+|.|.++..|...+|...+++||+++.+++.|++... ....++++++.+|+.+++...-
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~----- 119 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFF----- 119 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHC-----
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhC-----
Confidence 35578999999999999999999999999999999999999986531 0123579999999987655321
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 602 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
....||.|++....+.... .-.-..+....+|+.+.+.|+|||.|++.. ..
T Consensus 120 -------------------------~~~~~D~v~~~~~dp~~k~--~h~krr~~~~~~l~~~~~~LkpGG~l~~~t--d~ 170 (235)
T 3ckk_A 120 -------------------------YKGQLTKMFFLFPDPHFKR--TKHKWRIISPTLLAEYAYVLRVGGLVYTIT--DV 170 (235)
T ss_dssp -------------------------CTTCEEEEEEESCC-------------CCCHHHHHHHHHHEEEEEEEEEEE--SC
T ss_pred -------------------------CCcCeeEEEEeCCCchhhh--hhhhhhhhhHHHHHHHHHHCCCCCEEEEEe--CC
Confidence 1357999988432211000 000122455789999999999999999765 33
Q ss_pred hhHHHHHHHHHHH
Q 004354 682 QATKDMVISRMKM 694 (759)
Q Consensus 682 ~~~~~~v~~~l~~ 694 (759)
..+...+++.+..
T Consensus 171 ~~~~~~~~~~l~~ 183 (235)
T 3ckk_A 171 LELHDWMCTHFEE 183 (235)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 4444444555544
No 291
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.70 E-value=1.1e-07 Score=99.71 Aligned_cols=138 Identities=14% Similarity=0.084 Sum_probs=98.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
...+||.+|.|.|..+..|...+++ .+|++||+++.+++.|++.+ |+ ++++++.+|+.++......
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~~~------- 152 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV---LNTIIINADMRKYKDYLLK------- 152 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC---CSEEEEESCHHHHHHHHHH-------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC---CcEEEEeCChHhcchhhhh-------
Confidence 4569999999999999999998776 79999999999999999886 54 3799999999988653210
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCC----------CCCChHHHHHHHHHccCcCcEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA----------ADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp----------~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
....||+|++|+..+. .|+.-.. ..-....+|+.+.+.|+|||.|+
T Consensus 153 ----------------------~~~~fD~Vl~d~Pcs~--~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 208 (274)
T 3ajd_A 153 ----------------------NEIFFDKILLDAPCSG--NIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELV 208 (274)
T ss_dssp ----------------------TTCCEEEEEEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------ccccCCEEEEcCCCCC--CcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 0257999999874321 1110000 00134789999999999999999
Q ss_pred EEecCCChhHHHHHHHHHHHhcCceE
Q 004354 675 VNLVSRSQATKDMVISRMKMVFNHLF 700 (759)
Q Consensus 675 ~N~~~~~~~~~~~v~~~l~~vF~~v~ 700 (759)
+...+......+.++..+.+-++..-
T Consensus 209 ~stcs~~~~ene~~v~~~l~~~~~~~ 234 (274)
T 3ajd_A 209 YSTCSMEVEENEEVIKYILQKRNDVE 234 (274)
T ss_dssp EEESCCCTTSSHHHHHHHHHHCSSEE
T ss_pred EEECCCChHHhHHHHHHHHHhCCCcE
Confidence 98755544433556666655555443
No 292
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.70 E-value=2.2e-08 Score=108.84 Aligned_cols=96 Identities=15% Similarity=0.140 Sum_probs=77.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCCcccEEEeCCCChhH-
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQGGLDALMEPELGHKL- 144 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~~~- 144 (759)
.+..+|||||||+|.++..+++.. ..+++++|+ +.+++.+++ .++++|+.+|+.+....||+|++....|+.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~p~~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG-----SNNLTYVGGDMFTSIPNADAVLLKYILHNWT 260 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----BTTEEEEECCTTTCCCCCSEEEEESCGGGSC
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----CCCcEEEeccccCCCCCccEEEeehhhccCC
Confidence 356799999999999999999872 236999999 988876543 256999999997622459999998765532
Q ss_pred ---HHHHHHHHHHhccc---CcEEEEEEcC
Q 004354 145 ---GNQYLSEVKRLLKS---GGKFVCLTLA 168 (759)
Q Consensus 145 ---~~~~l~ei~rvLkp---GG~liiit~~ 168 (759)
...++++++++|+| ||++++....
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 44999999999999 9999998754
No 293
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.69 E-value=1.7e-07 Score=93.88 Aligned_cols=120 Identities=9% Similarity=0.009 Sum_probs=90.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|+|.++..+... ..+|++||+++.+++.|++.. |+ .++++++.+|+.+.+..
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~--~~~v~~~~~d~~~~~~~---------- 119 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGL--SPRMRAVQGTAPAALAD---------- 119 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCTTGGGTT----------
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCC--CCCEEEEeCchhhhccc----------
Confidence 34578999999999999988887 569999999999999999885 55 34799999998775332
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhH
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQAT 684 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~ 684 (759)
...||+|+++. . + +.++++.+.+.|+|||.|++..... ..
T Consensus 120 -----------------------~~~~D~v~~~~--~-----~--------~~~~l~~~~~~LkpgG~lv~~~~~~--~~ 159 (204)
T 3njr_A 120 -----------------------LPLPEAVFIGG--G-----G--------SQALYDRLWEWLAPGTRIVANAVTL--ES 159 (204)
T ss_dssp -----------------------SCCCSEEEECS--C-----C--------CHHHHHHHHHHSCTTCEEEEEECSH--HH
T ss_pred -----------------------CCCCCEEEECC--c-----c--------cHHHHHHHHHhcCCCcEEEEEecCc--cc
Confidence 14699999853 1 1 1339999999999999999987543 33
Q ss_pred HHHHHHHHHHhcCceEE
Q 004354 685 KDMVISRMKMVFNHLFC 701 (759)
Q Consensus 685 ~~~v~~~l~~vF~~v~~ 701 (759)
...+...+++.--.+..
T Consensus 160 ~~~~~~~l~~~g~~i~~ 176 (204)
T 3njr_A 160 ETLLTQLHARHGGQLLR 176 (204)
T ss_dssp HHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHhCCCcEEE
Confidence 34455666655333333
No 294
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.69 E-value=8.9e-09 Score=110.11 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=73.7
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeC----CHHHHHHHHHHhcc-CCCCcEEEEe-ecccCC-CcccEEEeCC
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDF----SKVVISDMLRRNVR-DRSDMRWRVM-DMTSMQ-GGLDALMEPE 139 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDi----S~~~I~~a~~r~~~-~~~~i~f~~~-D~~~~~-gtfD~Ii~~~ 139 (759)
.++.+|||||||+|.++..+++. ..|+|+|+ ++.+++.+ .... ..+++.|+++ |+.+++ ++||+|+|..
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~ 156 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDI 156 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSCCCCCSEEEECC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCCcCCCCEEEECC
Confidence 46789999999999999999988 35999999 55433211 1111 1256899999 998877 8899999964
Q ss_pred CC---hhH-----HHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 140 LG---HKL-----GNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 140 ~~---~~~-----~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
.. ++. ...+|..+.++|||||.|++-.+..
T Consensus 157 ~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 157 GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 32 222 1157899999999999999877765
No 295
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.69 E-value=9.7e-08 Score=98.97 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=83.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||.|+|.++..|...+|..+|++||+++.+++.|++.. |+ .+++++.+|+.++.....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l---~~v~~~~~d~~~~~~~~~-------- 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGL---KGARALWGRAEVLAREAG-------- 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTC---SSEEEEECCHHHHTTSTT--------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC---CceEEEECcHHHhhcccc--------
Confidence 3567999999999999999999989999999999999999999876 65 349999999988742100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
...+||+|+...... -..+++.+.+.|+|||.|++-.
T Consensus 148 ----------------------~~~~fD~I~s~a~~~--------------~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 148 ----------------------HREAYARAVARAVAP--------------LCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ----------------------TTTCEEEEEEESSCC--------------HHHHHHHHGGGEEEEEEEEEEE
T ss_pred ----------------------cCCCceEEEECCcCC--------------HHHHHHHHHHHcCCCeEEEEEe
Confidence 125799999854321 1679999999999999888654
No 296
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.68 E-value=1.3e-08 Score=104.66 Aligned_cols=100 Identities=14% Similarity=0.171 Sum_probs=78.8
Q ss_pred CCCeEEEEcccccHHHHHHHHh----CCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHH--HHhhcccCccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHEC----MPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF--VREMKSSSATD 602 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~----~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~--l~~~~~~~~~~ 602 (759)
.+.+||.||.|+|.++..|... .|..+|++||++|.+++.|+ ++ .++++++.+|+.++ +....
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~---~~--~~~v~~~~gD~~~~~~l~~~~------ 149 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA---SD--MENITLHQGDCSDLTTFEHLR------ 149 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG---GG--CTTEEEEECCSSCSGGGGGGS------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh---cc--CCceEEEECcchhHHHHHhhc------
Confidence 3479999999999999888886 57789999999999999998 23 36899999998764 22211
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHH-ccCcCcEEEEEe
Q 004354 603 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD-ALSEQGLFIVNL 677 (759)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~-~L~~~Gilv~N~ 677 (759)
...||+|++|.... --..+|..+.+ .|+|||+|++.-
T Consensus 150 -------------------------~~~fD~I~~d~~~~-------------~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 150 -------------------------EMAHPLIFIDNAHA-------------NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp -------------------------SSCSSEEEEESSCS-------------SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred -------------------------cCCCCEEEECCchH-------------hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 23699999976421 12678999996 999999999853
No 297
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.68 E-value=6.8e-08 Score=105.72 Aligned_cols=96 Identities=17% Similarity=0.037 Sum_probs=76.3
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCCcccEEEeCCCChh--
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQGGLDALMEPELGHK-- 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~~-- 143 (759)
.+..+|||||||+|.++..+++... .+++++|+ +.+++.++ ..++++|+.+|+.+....-|+|++....|.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~D~~~~~p~~D~v~~~~vlh~~~ 273 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-----QFPGVTHVGGDMFKEVPSGDTILMKWILHDWS 273 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTTCCCCCSEEEEESCGGGSC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-----hcCCeEEEeCCcCCCCCCCCEEEehHHhccCC
Confidence 4678999999999999999998632 36999999 87776543 236899999999872222299999776652
Q ss_pred --HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 144 --LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 144 --~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
....+|++++++|+|||++++.++.
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 2678999999999999999998764
No 298
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.68 E-value=6.9e-08 Score=99.46 Aligned_cols=129 Identities=19% Similarity=0.281 Sum_probs=91.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc-----------CCCCCCCeEEEEccHHHHHHhhcc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF-----------GFTQDKSLKVHITDGIKFVREMKS 597 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F-----------gl~~~~rl~v~i~Da~~~l~~~~~ 597 (759)
...+||.||+|+|.++..+....|..++++||+++.+++.|++.+ ++ ++++++.+|+.+++...-
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~---~nv~~~~~D~~~~l~~~~- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF---QNINVLRGNAMKFLPNFF- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT---TTEEEEECCTTSCGGGTS-
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC---CcEEEEeccHHHHHHHhc-
Confidence 457899999999999999999988889999999999999998875 33 479999999987665421
Q ss_pred cCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 598 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
....+|.|++...++.... .---..++..+++..+.+.|+|||+|++-.
T Consensus 125 -----------------------------~~~~~d~v~~~~p~p~~k~--~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 125 -----------------------------EKGQLSKMFFCFPDPHFKQ--RKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp -----------------------------CTTCEEEEEEESCCCC--------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------------------cccccCEEEEECCCccccc--chhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 1357899987542221100 000123345799999999999999999843
Q ss_pred cCCChhHHHHHHHHHHH
Q 004354 678 VSRSQATKDMVISRMKM 694 (759)
Q Consensus 678 ~~~~~~~~~~v~~~l~~ 694 (759)
....+.+.+.+.+..
T Consensus 174 --d~~~~~~~~~~~~~~ 188 (246)
T 2vdv_E 174 --DVKDLHEWMVKHLEE 188 (246)
T ss_dssp --SCHHHHHHHHHHHHH
T ss_pred --ccHHHHHHHHHHHHh
Confidence 344444444444433
No 299
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.68 E-value=5.2e-08 Score=106.75 Aligned_cols=96 Identities=19% Similarity=0.088 Sum_probs=76.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCCcccEEEeCCCChh--
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQGGLDALMEPELGHK-- 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~~-- 143 (759)
.+..+|||||||+|.++..+++... .+++++|+ +.+++.++ ..++++|+.+|+.+....-|+|++....|.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-----~~~~v~~~~~d~~~~~p~~D~v~~~~vlh~~~ 275 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-----AFSGVEHLGGDMFDGVPKGDAIFIKWICHDWS 275 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-----CCTTEEEEECCTTTCCCCCSEEEEESCGGGBC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-----hcCCCEEEecCCCCCCCCCCEEEEechhhcCC
Confidence 4568999999999999999998732 36999999 87776543 236899999999762222299999776652
Q ss_pred --HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 144 --LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 144 --~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
...+++++++++|+|||++++.++.
T Consensus 276 ~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 276 DEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 2568999999999999999998764
No 300
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.68 E-value=5.2e-08 Score=110.44 Aligned_cols=101 Identities=15% Similarity=0.177 Sum_probs=81.7
Q ss_pred CCCeEEEECCCcchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC----CcccEEEeCCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ----GGLDALMEPEL 140 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~----gtfD~Ii~~~~ 140 (759)
++.+|||+|||+|..+.+|++. + -..|+++|+|+.+++.+++++... ..++.++++|+.++. +.||+|+++..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7789999999999999999986 2 246999999999999999887543 357999999998754 68999997320
Q ss_pred ----C----------h----------hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 141 ----G----------H----------KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 141 ----~----------~----------~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
. + .....++.++.++|||||++++.|.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 0 0 01357899999999999999998864
No 301
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.67 E-value=1.2e-07 Score=94.33 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=80.2
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
+.+||.||+|.|.++..|... +..++++||+++.+++.|++.+.- ...++++++.+|+.+. .
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~------------ 106 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNI----P------------ 106 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBC----S------------
T ss_pred CCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHC----C------------
Confidence 349999999999999999988 778999999999999999998621 1256899999996542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
.....||+|+... ....+ ---..+|+.+++.|+|||.+++....
T Consensus 107 -----------------~~~~~~D~v~~~~----~l~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 107 -----------------IEDNYADLIVSRG----SVFFW------EDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp -----------------SCTTCEEEEEEES----CGGGC------SCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -----------------CCcccccEEEECc----hHhhc------cCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 1136899999832 10000 01267999999999999999886433
No 302
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.67 E-value=2.2e-07 Score=90.36 Aligned_cols=119 Identities=19% Similarity=0.243 Sum_probs=90.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.+|.|.|.++..+.... .++++||+++.+++.|++.+.. ..+++++++.+|..+.+...
T Consensus 32 ~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~----------- 98 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKI----------- 98 (192)
T ss_dssp CTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTS-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccC-----------
Confidence 355799999999999999888876 6999999999999999997621 12368999999988754321
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHH
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 686 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~ 686 (759)
..||+|+++..- .. -..+++.+.+.|+|||.+++.... .....
T Consensus 99 ----------------------~~~D~v~~~~~~-----------~~--~~~~l~~~~~~l~~gG~l~~~~~~--~~~~~ 141 (192)
T 1l3i_A 99 ----------------------PDIDIAVVGGSG-----------GE--LQEILRIIKDKLKPGGRIIVTAIL--LETKF 141 (192)
T ss_dssp ----------------------CCEEEEEESCCT-----------TC--HHHHHHHHHHTEEEEEEEEEEECB--HHHHH
T ss_pred ----------------------CCCCEEEECCch-----------HH--HHHHHHHHHHhcCCCcEEEEEecC--cchHH
Confidence 369999984211 11 278999999999999999988754 33334
Q ss_pred HHHHHHHHh-c
Q 004354 687 MVISRMKMV-F 696 (759)
Q Consensus 687 ~v~~~l~~v-F 696 (759)
.+.+.+++. |
T Consensus 142 ~~~~~l~~~g~ 152 (192)
T 1l3i_A 142 EAMECLRDLGF 152 (192)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
Confidence 566667665 6
No 303
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.67 E-value=1.6e-07 Score=101.47 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=91.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
+...+||.+|+|+|.++..+.... .+|++||+++.+++.|++.+ ++ .+.+++++.+|+.+++.....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~g--a~V~~VD~s~~al~~a~~n~~~~gl-~~~~v~~i~~D~~~~l~~~~~------- 221 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAG--AEVTHVDASKKAIGWAKENQVLAGL-EQAPIRWICEDAMKFIQREER------- 221 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEECSCHHHHHHHHHHHHHHTC-TTSCEEEECSCHHHHHHHHHH-------
T ss_pred CCCCcEEEcccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCC-CccceEEEECcHHHHHHHHHh-------
Confidence 345699999999999998888753 39999999999999999987 54 223699999999999865320
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC-----hHHHHHHHHHccCcCcEEEEEecC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV-----EGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~-----~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
.+.+||+||+|.-.- +.+ +..... -..++..+.+.|+|||+|++...+
T Consensus 222 ----------------------~~~~fD~Ii~dPP~~----~~~-~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 222 ----------------------RGSTYDIILTDPPKF----GRG-THGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp ----------------------HTCCBSEEEECCCSE----EEC-TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred ----------------------cCCCceEEEECCccc----cCC-chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 025799999975211 000 000011 257899999999999997765544
Q ss_pred CChhHHHHHHHHHHHhcC
Q 004354 680 RSQATKDMVISRMKMVFN 697 (759)
Q Consensus 680 ~~~~~~~~v~~~l~~vF~ 697 (759)
........+...+++.+.
T Consensus 275 ~~~~~~~~~~~~l~~a~~ 292 (332)
T 2igt_A 275 SIRASFYSMHELMRETMR 292 (332)
T ss_dssp CTTSCHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 432222333444454443
No 304
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.67 E-value=2.1e-07 Score=101.37 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=81.9
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCC-eEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC-CcccEEEeCCCChh
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFH-GITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ-GGLDALMEPELGHK 143 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~-~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~-gtfD~Ii~~~~~~~ 143 (759)
....+|||||||+|.++..+++.... +++..|. |.+++.++++.... ..+++|+.+|+.+.+ ..+|++++....|.
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~~~~~vlh~ 256 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLYILARVLHD 256 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEEEEESSGGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceEEEeeeeccc
Confidence 45679999999999999999988332 5788886 78999988876432 367999999998766 67899999776553
Q ss_pred ----HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 144 ----LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 144 ----~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
....+|+++++.|+|||+++++...
T Consensus 257 ~~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 257 WADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp SCHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 2678899999999999999998753
No 305
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.66 E-value=4.1e-08 Score=110.36 Aligned_cols=111 Identities=16% Similarity=0.079 Sum_probs=86.5
Q ss_pred HHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccC-CCCcEEEEeecccCC--
Q 004354 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRD-RSDMRWRVMDMTSMQ-- 129 (759)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~-~~~i~f~~~D~~~~~-- 129 (759)
..+...+.. .++.+|||+|||+|..+.+++.. +-..|+++|+|+.+++.+++++... ..++.++++|+.++.
T Consensus 95 ~l~~~~L~~---~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~ 171 (456)
T 3m4x_A 95 MIVGTAAAA---KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH 171 (456)
T ss_dssp HHHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH
T ss_pred HHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh
Confidence 344455543 57889999999999999999875 2246999999999999998887543 356899999987764
Q ss_pred --CcccEEEeCCC----C-----h---------------hHHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 --GGLDALMEPEL----G-----H---------------KLGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 --gtfD~Ii~~~~----~-----~---------------~~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
++||+|+++.. . . .....++.++.++|||||+++..|.+
T Consensus 172 ~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 172 FSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp HTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC
T ss_pred ccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEee
Confidence 78999997431 0 0 01347899999999999999998864
No 306
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.65 E-value=7.1e-08 Score=95.97 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=81.3
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 609 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~ 609 (759)
..+||.||.|+|.++..+...+|..++++||+++.+++.|++.+....-++++++.+|+.++. .
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~---~------------- 129 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---S------------- 129 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---C-------------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC---c-------------
Confidence 469999999999999999998888999999999999999998762211234999999976531 1
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 610 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
..+||+|+..... + -..+++.+++.|+|||.+++-.....
T Consensus 130 ------------------~~~~D~i~~~~~~----------~----~~~~l~~~~~~L~~gG~l~~~~~~~~ 169 (207)
T 1jsx_A 130 ------------------EPPFDGVISRAFA----------S----LNDMVSWCHHLPGEQGRFYALKGQMP 169 (207)
T ss_dssp ------------------CSCEEEEECSCSS----------S----HHHHHHHHTTSEEEEEEEEEEESSCC
T ss_pred ------------------cCCcCEEEEeccC----------C----HHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 2579999973210 1 26899999999999999998764433
No 307
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.65 E-value=2.5e-07 Score=104.06 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=102.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.+|.|.|..+..|...++. ..|++||+++.+++.|++.+ |+ . +.++.+|+.++.....
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~~------- 168 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAFG------- 168 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHHC-------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhcc-------
Confidence 34579999999999999999998865 69999999999999999876 65 3 8999999999764332
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC--------------ChHHHHHHHHHccCc
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 669 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f--------------~~~~fl~~~~~~L~~ 669 (759)
..||+|++|+-.+. .|+..-.+.. +..++|+.+.+.|+|
T Consensus 169 -------------------------~~FD~Il~D~PcSg--~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 169 -------------------------TYFHRVLLDAPCSG--EGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp -------------------------SCEEEEEEECCCCC--GGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred -------------------------ccCCEEEECCCcCC--ccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 57999999985432 1221111111 137899999999999
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhcCce
Q 004354 670 QGLFIVNLVSRSQATKDMVISRMKMVFNHL 699 (759)
Q Consensus 670 ~Gilv~N~~~~~~~~~~~v~~~l~~vF~~v 699 (759)
||.|++...+-..+..+.++..+.+-++..
T Consensus 222 GG~LvysTCs~~~eEne~vv~~~l~~~~~~ 251 (464)
T 3m6w_A 222 GGVLVYSTCTFAPEENEGVVAHFLKAHPEF 251 (464)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHCTTE
T ss_pred CcEEEEEeccCchhcCHHHHHHHHHHCCCc
Confidence 999998876666666667777777766543
No 308
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.65 E-value=6.9e-08 Score=95.39 Aligned_cols=118 Identities=9% Similarity=0.060 Sum_probs=84.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
...+||.+|+|.|.++..+...+ |..++++||+++.+++.|++.+... ..++++++.+|+.++....
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~----------- 90 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI----------- 90 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-----------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-----------
Confidence 44699999999999999888875 5669999999999999999987321 1468999999986653211
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCC-CCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s-~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
..+||+|++|..- +....... ...-....+++.+.+.|+|||.+++..+..
T Consensus 91 ---------------------~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 91 ---------------------DCPVKAVMFNLGYLPSGDHSIS--TRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ---------------------CSCEEEEEEEESBCTTSCTTCB--CCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ---------------------cCCceEEEEcCCcccCcccccc--cCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 2679999997521 10000000 000012469999999999999999887543
No 309
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.65 E-value=1.1e-07 Score=92.56 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=83.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.+|.|.|.++..+... +..+|++||+++.+++.|++.+... ..++++++.+|+.+++.....
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---------- 112 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE---------- 112 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh----------
Confidence 4569999999999998877764 5569999999999999999987221 145799999999998765420
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHH--HHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTV--KDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~--~~~L~~~Gilv~N~~~~ 680 (759)
...+||+|++|.. - ..-....+++.+ .+.|+|||++++.....
T Consensus 113 -------------------~~~~fD~i~~~~~--~---------~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 113 -------------------EKLQFDLVLLDPP--Y---------AKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp -------------------TTCCEEEEEECCC--G---------GGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred -------------------cCCCCCEEEECCC--C---------CchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 1257999998531 0 011236677777 78899999999877544
No 310
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.64 E-value=5.2e-08 Score=106.86 Aligned_cols=99 Identities=12% Similarity=0.201 Sum_probs=78.6
Q ss_pred CCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC----C-------------
Q 004354 69 PPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ----G------------- 130 (759)
Q Consensus 69 ~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~----g------------- 130 (759)
+.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++...+ .+++|+++|+.+.. +
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 578999999999999988874 5679999999999999998875443 57999999987652 1
Q ss_pred --cccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCchhh
Q 004354 131 --GLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHV 172 (759)
Q Consensus 131 --tfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~ 172 (759)
.||+|+++.... .+..++.+.|+++|+++.++..+...
T Consensus 293 ~~~fD~Vv~dPPr~----g~~~~~~~~l~~~g~ivyvsc~p~t~ 332 (369)
T 3bt7_A 293 SYQCETIFVDPPRS----GLDSETEKMVQAYPRILYISCNPETL 332 (369)
T ss_dssp GCCEEEEEECCCTT----CCCHHHHHHHTTSSEEEEEESCHHHH
T ss_pred cCCCCEEEECcCcc----ccHHHHHHHHhCCCEEEEEECCHHHH
Confidence 799999975321 23456677788999999999875543
No 311
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.63 E-value=1.5e-07 Score=98.58 Aligned_cols=147 Identities=15% Similarity=0.187 Sum_probs=101.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|+|.++..+...+|..++++||+++.+++.|++.+ |+ ++++++.+|..+.+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~---~~v~~~~~d~~~~~~------------ 173 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI---KNIHILQSDWFSALA------------ 173 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCSTTGGGT------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEEcchhhhcc------------
Confidence 346899999999999999998889899999999999999999887 54 379999999765421
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCC-----C--CCcCCCCC--------ChHHHHHHHHHccCcC
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSS-----G--MTCPAADF--------VEGSFLLTVKDALSEQ 670 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~-----g--~scPp~~f--------~~~~fl~~~~~~L~~~ 670 (759)
..+||+|+.+.--..... . ..-|...+ .-..+++.+.+.|+||
T Consensus 174 ----------------------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkpg 231 (276)
T 2b3t_A 174 ----------------------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSG 231 (276)
T ss_dssp ----------------------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEE
T ss_pred ----------------------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCC
Confidence 257999999631100000 0 00122222 1267899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHh-cCceEEEeecCCccEEEEEe
Q 004354 671 GLFIVNLVSRSQATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGL 715 (759)
Q Consensus 671 Gilv~N~~~~~~~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~ 715 (759)
|.+++........ .+.+.+++. |..+...+--.+...+++|.
T Consensus 232 G~l~~~~~~~~~~---~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 232 GFLLLEHGWQQGE---AVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp EEEEEECCSSCHH---HHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred CEEEEEECchHHH---HHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 9999876443333 344445443 76665555445566777664
No 312
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.63 E-value=6.1e-08 Score=92.95 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=82.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.+|.|.|.++..+....+. +++||+++.+++.|++.+....- +++++.+|+.+++.....
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~----------- 106 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKA----------- 106 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHH-----------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhc-----------
Confidence 4578999999999999988887543 99999999999999998732111 799999999998765431
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHH--HccCcCcEEEEEecCCC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVK--DALSEQGLFIVNLVSRS 681 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~--~~L~~~Gilv~N~~~~~ 681 (759)
...+||+|++|.--. -...++++.+. +.|+|||++++......
T Consensus 107 ------------------~~~~~D~i~~~~~~~------------~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 107 ------------------QGERFTVAFMAPPYA------------MDLAALFGELLASGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp ------------------TTCCEEEEEECCCTT------------SCTTHHHHHHHHHTCEEEEEEEEEEEETTS
T ss_pred ------------------cCCceEEEEECCCCc------------hhHHHHHHHHHhhcccCCCcEEEEEeCCcc
Confidence 124799999963110 11246777777 99999999999876544
No 313
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.63 E-value=4.6e-07 Score=101.50 Aligned_cols=127 Identities=8% Similarity=0.125 Sum_probs=85.9
Q ss_pred HHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccC----C
Q 004354 55 DPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSM----Q 129 (759)
Q Consensus 55 ~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~----~ 129 (759)
..+..++.. .++.+|||+|||+|.++..|++.+ .+|+|+|+|+.+++.|++++...+ .+++|+++|+.+. +
T Consensus 276 ~~~~~~l~~---~~~~~VLDlgcG~G~~~~~la~~~-~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 276 ARALEWLDV---QPEDRVLDLFCGMGNFTLPLATQA-ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHTC---CTTCEEEEESCTTTTTHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred HHHHHhhcC---CCCCEEEECCCCCCHHHHHHHhhC-CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 334444443 467899999999999999999884 469999999999999998875443 4799999999873 1
Q ss_pred ---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEEcCchhhhhhhccccCCCceEEE
Q 004354 130 ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLTLAESHVLGLLFPKFRFGWKMSV 188 (759)
Q Consensus 130 ---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit~~~~~~~~~l~~~~~~~w~v~~ 188 (759)
+.||+|+++...... ..+++.+.+ ++|++.++ ++..+....+.+......||.+..
T Consensus 352 ~~~~~fD~Vv~dPPr~g~-~~~~~~l~~-~~p~~ivy-vsc~p~tlard~~~l~~~Gy~~~~ 410 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAGA-AGVMQQIIK-LEPIRIVY-VSCNPATLARDSEALLKAGYTIAR 410 (433)
T ss_dssp GGTTCCSEEEECCCTTCC-HHHHHHHHH-HCCSEEEE-EESCHHHHHHHHHHHHHTTCEEEE
T ss_pred hhcCCCCEEEECCCCccH-HHHHHHHHh-cCCCeEEE-EECChHHHHhhHHHHHHCCcEEEE
Confidence 579999997632211 245555443 67776544 455444333333222233676655
No 314
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.62 E-value=2e-07 Score=94.39 Aligned_cols=144 Identities=15% Similarity=0.125 Sum_probs=95.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.+|+|.|.++..|...+ |..+|++||+++.+++.|++.... .++++++.+|+.+......
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~--~~~v~~~~~d~~~~~~~~~---------- 139 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE--RRNIVPILGDATKPEEYRA---------- 139 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS--CTTEEEEECCTTCGGGGTT----------
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc--cCCCEEEEccCCCcchhhc----------
Confidence 345689999999999999998875 557999999999999999888754 2689999999765311000
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC-----
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----- 681 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~----- 681 (759)
....||+|++|....+ ....++..+.+.|+|||.|++-+....
T Consensus 140 --------------------~~~~~D~v~~~~~~~~------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 187 (227)
T 1g8a_A 140 --------------------LVPKVDVIFEDVAQPT------------QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTK 187 (227)
T ss_dssp --------------------TCCCEEEEEECCCSTT------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTS
T ss_pred --------------------ccCCceEEEECCCCHh------------HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCC
Confidence 0247999998753111 123569999999999998887642211
Q ss_pred --hhHHHHHHHHHHHhcCceEEEeecC--CccEEEEEe
Q 004354 682 --QATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGL 715 (759)
Q Consensus 682 --~~~~~~v~~~l~~vF~~v~~~~~~~--~~N~Vl~a~ 715 (759)
.......+..+.+.|..+....... ....++++.
T Consensus 188 ~~~~~~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (227)
T 1g8a_A 188 EPEQVFREVERELSEYFEVIERLNLEPYEKDHALFVVR 225 (227)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEEEECTTTSSSEEEEEEE
T ss_pred ChhhhhHHHHHHHHhhceeeeEeccCcccCCCEEEEEE
Confidence 1112223444455576665555432 234455554
No 315
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.62 E-value=2.7e-07 Score=93.95 Aligned_cols=143 Identities=16% Similarity=0.179 Sum_probs=97.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|+|.++.+|....|..+|++||+++.+++.|++.... .+++.++.+|+.+......
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--~~~v~~~~~d~~~~~~~~~------------ 139 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE--RENIIPILGDANKPQEYAN------------ 139 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--CTTEEEEECCTTCGGGGTT------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--CCCeEEEECCCCCcccccc------------
Confidence 45689999999999999999998767999999999999999988753 3789999999765211011
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC--Ch----
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR--SQ---- 682 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~--~~---- 682 (759)
. ...||+|+.|+...+ ....+++.+.+.|+|||.|++-+..+ +.
T Consensus 140 -----------------~-~~~~D~v~~~~~~~~------------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 189 (230)
T 1fbn_A 140 -----------------I-VEKVDVIYEDVAQPN------------QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDP 189 (230)
T ss_dssp -----------------T-SCCEEEEEECCCSTT------------HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCH
T ss_pred -----------------c-CccEEEEEEecCChh------------HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCH
Confidence 1 156999997652221 23678999999999999988853211 11
Q ss_pred -h-HHHHHHHHHHHh-cCceEEEeecC--CccEEEEEec
Q 004354 683 -A-TKDMVISRMKMV-FNHLFCLQLEE--DVNLVLFGLS 716 (759)
Q Consensus 683 -~-~~~~v~~~l~~v-F~~v~~~~~~~--~~N~Vl~a~~ 716 (759)
. +.+. +..|.+. |..+....+.. ....+++|.+
T Consensus 190 ~~~~~~~-l~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k 227 (230)
T 1fbn_A 190 KEIFKEQ-KEILEAGGFKIVDEVDIEPFEKDHVMFVGIW 227 (230)
T ss_dssp HHHHHHH-HHHHHHHTEEEEEEEECTTTSTTEEEEEEEE
T ss_pred HHhhHHH-HHHHHHCCCEEEEEEccCCCccceEEEEEEe
Confidence 1 1133 3355553 65544444332 2345666654
No 316
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.62 E-value=2e-08 Score=97.59 Aligned_cols=83 Identities=16% Similarity=0.187 Sum_probs=68.6
Q ss_pred CCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC------CcccEEEeCC
Q 004354 66 SSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ------GGLDALMEPE 139 (759)
Q Consensus 66 ~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~------gtfD~Ii~~~ 139 (759)
..++.+|||+|||. +++|+|+.|++.++++... +++|.++|+.+++ ++||+|++..
T Consensus 10 ~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp CCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred CCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEEEECC
Confidence 36789999999996 2399999999999888632 4899999998753 6899999976
Q ss_pred CChh---HHHHHHHHHHHhcccCcEEEEEE
Q 004354 140 LGHK---LGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 140 ~~~~---~~~~~l~ei~rvLkpGG~liiit 166 (759)
..++ ....++++++|+|||||++++..
T Consensus 72 ~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 72 VPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp STTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 5443 36899999999999999999853
No 317
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.62 E-value=1.2e-07 Score=97.64 Aligned_cols=120 Identities=19% Similarity=0.184 Sum_probs=89.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
....+||.+|.|.|.++..+... .|..++++||+++.+++.|++.+... ..++++++.+|+.+. ..
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~---------- 162 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--EL---------- 162 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CC----------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CC----------
Confidence 34569999999999999988887 56789999999999999999987210 146899999997653 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
....||+|++|.... ..+++.+.+.|+|||.+++...+. ...
T Consensus 163 ---------------------~~~~~D~v~~~~~~~---------------~~~l~~~~~~L~~gG~l~~~~~~~--~~~ 204 (258)
T 2pwy_A 163 ---------------------EEAAYDGVALDLMEP---------------WKVLEKAALALKPDRFLVAYLPNI--TQV 204 (258)
T ss_dssp ---------------------CTTCEEEEEEESSCG---------------GGGHHHHHHHEEEEEEEEEEESCH--HHH
T ss_pred ---------------------CCCCcCEEEECCcCH---------------HHHHHHHHHhCCCCCEEEEEeCCH--HHH
Confidence 125799999964221 368999999999999999876433 333
Q ss_pred HHHHHHHHHh-cC
Q 004354 686 DMVISRMKMV-FN 697 (759)
Q Consensus 686 ~~v~~~l~~v-F~ 697 (759)
..++..+++. |.
T Consensus 205 ~~~~~~l~~~gf~ 217 (258)
T 2pwy_A 205 LELVRAAEAHPFR 217 (258)
T ss_dssp HHHHHHHTTTTEE
T ss_pred HHHHHHHHHCCCc
Confidence 4455666543 44
No 318
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.61 E-value=3.8e-08 Score=96.27 Aligned_cols=114 Identities=11% Similarity=0.142 Sum_probs=79.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|+|.++..|... ..+|++||++|.+++.|++.+ |+ ++++++.+|...+ ....
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~~~~~l-~~~~-------- 86 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGI---ENTELILDGHENL-DHYV-------- 86 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTC---CCEEEEESCGGGG-GGTC--------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCcHHHH-Hhhc--------
Confidence 34579999999999999999887 569999999999999999987 44 5799999765442 1111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCC-CCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDS-PDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s-~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
+.+||+|++++.. ......+. ...-....+++.+.+.|+|||.|++-++..
T Consensus 87 -----------------------~~~fD~v~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 87 -----------------------REPIRAAIFNLGYLPSADKSVI--TKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp -----------------------CSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred -----------------------cCCcCEEEEeCCCCCCcchhcc--cChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 3579999987411 10000000 000113468899999999999999877654
No 319
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.61 E-value=1.6e-07 Score=103.54 Aligned_cols=114 Identities=16% Similarity=0.118 Sum_probs=87.4
Q ss_pred hHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC---------------------------------------Ce
Q 004354 53 LRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------HG 93 (759)
Q Consensus 53 l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~---------------------------------------~~ 93 (759)
+...+...... .++.+|||+|||+|.++..++..+. ..
T Consensus 183 lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 183 LAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp HHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred HHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 44444444443 5678999999999999988876532 25
Q ss_pred EEEEeCCHHHHHHHHHHhccCCC--CcEEEEeecccCC--CcccEEEeCCCCh------hHHHHHHHHHHHhccc--CcE
Q 004354 94 ITNVDFSKVVISDMLRRNVRDRS--DMRWRVMDMTSMQ--GGLDALMEPELGH------KLGNQYLSEVKRLLKS--GGK 161 (759)
Q Consensus 94 VtgIDiS~~~I~~a~~r~~~~~~--~i~f~~~D~~~~~--gtfD~Ii~~~~~~------~~~~~~l~ei~rvLkp--GG~ 161 (759)
|+|+|+++.+++.|++++...+. .++|.++|+.++. +.||+|+++.... .....+.+++.+.|++ ||.
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 99999999999999998754432 6999999999887 7899999976421 2366778888888876 899
Q ss_pred EEEEEcCc
Q 004354 162 FVCLTLAE 169 (759)
Q Consensus 162 liiit~~~ 169 (759)
+++++-..
T Consensus 340 ~~iit~~~ 347 (385)
T 3ldu_A 340 YYLITSYE 347 (385)
T ss_dssp EEEEESCT
T ss_pred EEEEECCH
Confidence 88888643
No 320
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.60 E-value=1.5e-07 Score=95.49 Aligned_cols=105 Identities=23% Similarity=0.336 Sum_probs=83.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+.+||.||+|.|.++..+...+|..++++||+++.+++.|++.+.- ..+++++.+|+.++ .
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~----~----------- 105 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG--NLKVKYIEADYSKY----D----------- 105 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS--CTTEEEEESCTTTC----C-----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc--CCCEEEEeCchhcc----C-----------
Confidence 456899999999999999999999989999999999999999999853 33899999997543 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChH---HHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG---SFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~---~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
. ...||+|++.. . -..+-.. .+|+.+++.|+|||.|++....
T Consensus 106 ------------------~-~~~fD~v~~~~----~-------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 106 ------------------F-EEKYDMVVSAL----S-------IHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp ------------------C-CSCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------------C-CCCceEEEEeC----c-------cccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 1 15799999831 1 1222222 4899999999999999876533
No 321
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.60 E-value=1.2e-07 Score=97.54 Aligned_cols=104 Identities=18% Similarity=0.228 Sum_probs=82.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+.+||.||+|+|.++..+...+|..++++||+++.+++.|++.. ++++++.+|+.++. .
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~---~----------- 92 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL-----PNTNFGKADLATWK---P----------- 92 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----TTSEEEECCTTTCC---C-----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----CCcEEEECChhhcC---c-----------
Confidence 4557999999999999999998888889999999999999999882 47899999975431 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
...||+|+... ....+ + --..+|+.+++.|+|||.|++.....
T Consensus 93 --------------------~~~fD~v~~~~----~l~~~--~----~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 93 --------------------AQKADLLYANA----VFQWV--P----DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --------------------SSCEEEEEEES----CGGGS--T----THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --------------------cCCcCEEEEeC----chhhC--C----CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 35799999822 11111 1 12679999999999999999987544
No 322
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.60 E-value=8.1e-08 Score=100.70 Aligned_cols=119 Identities=13% Similarity=0.185 Sum_probs=89.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
....+||.+|+|.|.++..|... .|..++++||+++.+++.|++.+... ..++++++.+|+.+.+ .
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~---~--------- 176 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI---S--------- 176 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC---C---------
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC---c---------
Confidence 44579999999999999988887 67789999999999999999987322 2367999999976521 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
...||+|++|+... ..+|+.+.+.|+|||.+++..... ...
T Consensus 177 ----------------------~~~fD~Vi~~~~~~---------------~~~l~~~~~~LkpgG~l~i~~~~~--~~~ 217 (275)
T 1yb2_A 177 ----------------------DQMYDAVIADIPDP---------------WNHVQKIASMMKPGSVATFYLPNF--DQS 217 (275)
T ss_dssp ----------------------SCCEEEEEECCSCG---------------GGSHHHHHHTEEEEEEEEEEESSH--HHH
T ss_pred ----------------------CCCccEEEEcCcCH---------------HHHHHHHHHHcCCCCEEEEEeCCH--HHH
Confidence 25799999954211 468999999999999999877432 233
Q ss_pred HHHHHHHHHh-cC
Q 004354 686 DMVISRMKMV-FN 697 (759)
Q Consensus 686 ~~v~~~l~~v-F~ 697 (759)
..+.+.+++. |.
T Consensus 218 ~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 218 EKTVLSLSASGMH 230 (275)
T ss_dssp HHHHHHSGGGTEE
T ss_pred HHHHHHHHHCCCe
Confidence 4445555543 44
No 323
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.60 E-value=2.5e-07 Score=102.28 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=86.9
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC---------------------------------------C
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~---------------------------------------~ 92 (759)
.+...+...... .++..|||++||+|.++..++..+. .
T Consensus 188 ~lAa~ll~l~~~---~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 188 TMAAALVLLTSW---HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp HHHHHHHHHSCC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 344445555443 5678999999999999988876532 2
Q ss_pred eEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCCCh------hHHHHHHHHHHHhccc--Cc
Q 004354 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPELGH------KLGNQYLSEVKRLLKS--GG 160 (759)
Q Consensus 93 ~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~~~------~~~~~~l~ei~rvLkp--GG 160 (759)
.|+|+|+|+.+++.|++++...+ ..+++.++|+.+++ ..||+|+++.... .....+.+.+.+.|++ ||
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~ 344 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTW 344 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCC
Confidence 49999999999999999876544 35999999999887 7899999986321 2255677777777776 99
Q ss_pred EEEEEEcCc
Q 004354 161 KFVCLTLAE 169 (759)
Q Consensus 161 ~liiit~~~ 169 (759)
.+++++-..
T Consensus 345 ~~~iit~~~ 353 (393)
T 3k0b_A 345 SVYVLTSYE 353 (393)
T ss_dssp EEEEEECCT
T ss_pred EEEEEECCH
Confidence 998888643
No 324
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.58 E-value=5.4e-07 Score=92.34 Aligned_cols=144 Identities=13% Similarity=0.167 Sum_probs=102.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||+|+|.++..|.... |.-+|.+||++|.+++.|++... ..+++..+.+|+...-. ..
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~--~~~ni~~V~~d~~~p~~-~~---------- 142 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR--DRRNIFPILGDARFPEK-YR---------- 142 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST--TCTTEEEEESCTTCGGG-GT----------
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH--hhcCeeEEEEeccCccc-cc----------
Confidence 455799999999999999998875 67799999999999999998864 34679999998655311 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC-----
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS----- 681 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~----- 681 (759)
.....+|+|+.|+.-.+ ....++.++++.|+|||.+++-+..++
T Consensus 143 -------------------~~~~~vDvVf~d~~~~~------------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~ 191 (233)
T 4df3_A 143 -------------------HLVEGVDGLYADVAQPE------------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTT 191 (233)
T ss_dssp -------------------TTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHT
T ss_pred -------------------cccceEEEEEEeccCCh------------hHHHHHHHHHHhccCCCEEEEEEecccCCCCC
Confidence 12367999999874432 126799999999999999988664442
Q ss_pred --hhHHHHHHHHHHHh-cCceEEEeecC--CccEEEEEe
Q 004354 682 --QATKDMVISRMKMV-FNHLFCLQLEE--DVNLVLFGL 715 (759)
Q Consensus 682 --~~~~~~v~~~l~~v-F~~v~~~~~~~--~~N~Vl~a~ 715 (759)
.......++.|++. |.-+-.+.... ....++||.
T Consensus 192 p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 192 EPSEVYKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred ChHHHHHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 33445567777654 76555444432 335556653
No 325
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.58 E-value=1.7e-07 Score=101.22 Aligned_cols=120 Identities=15% Similarity=0.203 Sum_probs=86.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcC-------CC----CCCCeEEEEccHHHHHHhh
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFG-------FT----QDKSLKVHITDGIKFVREM 595 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg-------l~----~~~rl~v~i~Da~~~l~~~ 595 (759)
....+||.+|.|.|.++..|.... |..+|++||++|.+++.|++.+. +. ..++++++.+|+.+.+...
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 345699999999999999988874 66799999999999999999863 11 1368999999987653222
Q ss_pred cccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEE
Q 004354 596 KSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~ 675 (759)
. ...||+|++|..+. ..++..+.+.|+|||.|++
T Consensus 184 ~-------------------------------~~~fD~V~~~~~~~---------------~~~l~~~~~~LkpgG~lv~ 217 (336)
T 2b25_A 184 K-------------------------------SLTFDAVALDMLNP---------------HVTLPVFYPHLKHGGVCAV 217 (336)
T ss_dssp -----------------------------------EEEEEECSSST---------------TTTHHHHGGGEEEEEEEEE
T ss_pred C-------------------------------CCCeeEEEECCCCH---------------HHHHHHHHHhcCCCcEEEE
Confidence 2 24699999965321 1278999999999999997
Q ss_pred EecCCChhHHHHHHHHHHHh
Q 004354 676 NLVSRSQATKDMVISRMKMV 695 (759)
Q Consensus 676 N~~~~~~~~~~~v~~~l~~v 695 (759)
-.. .......+++.+++.
T Consensus 218 ~~~--~~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 218 YVV--NITQVIELLDGIRTC 235 (336)
T ss_dssp EES--SHHHHHHHHHHHHHH
T ss_pred EeC--CHHHHHHHHHHHHhc
Confidence 664 334444556666653
No 326
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.58 E-value=2.4e-07 Score=101.86 Aligned_cols=142 Identities=13% Similarity=0.132 Sum_probs=98.3
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
..+||.+|+|.|.++..+....|..+|++||+++.+++.|++.+ |+....+++++.+|+.+.+ .
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~---~---------- 289 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV---E---------- 289 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC---C----------
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC---C----------
Confidence 47999999999999999999999999999999999999999987 4432346888999976631 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHH
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 686 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~ 686 (759)
..+||+|++|.- -.. +. . ...-...++++.+.+.|+|||.|++-. .+....
T Consensus 290 ---------------------~~~fD~Ii~npp--fh~-~~-~-~~~~~~~~~l~~~~~~LkpgG~l~iv~-n~~~~~-- 340 (375)
T 4dcm_A 290 ---------------------PFRFNAVLCNPP--FHQ-QH-A-LTDNVAWEMFHHARRCLKINGELYIVA-NRHLDY-- 340 (375)
T ss_dssp ---------------------TTCEEEEEECCC--C----------CCHHHHHHHHHHHHEEEEEEEEEEE-ETTSCH--
T ss_pred ---------------------CCCeeEEEECCC--ccc-Cc-c-cCHHHHHHHHHHHHHhCCCCcEEEEEE-ECCcCH--
Confidence 357999999531 000 00 0 011123579999999999999988733 333332
Q ss_pred HHHHHHHHhcCceEEEeecCCccEEEEEec
Q 004354 687 MVISRMKMVFNHLFCLQLEEDVNLVLFGLS 716 (759)
Q Consensus 687 ~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~ 716 (759)
...+.+.|..+..+. .+..-.|+-+..
T Consensus 341 --~~~l~~~fg~~~~~a-~~~~F~V~~~~~ 367 (375)
T 4dcm_A 341 --FHKLKKIFGNCTTIA-TNNKFVVLKAVK 367 (375)
T ss_dssp --HHHHHHHHSCCEEEE-ECSSEEEEEEEC
T ss_pred --HHHHHHhcCCEEEEe-eCCCEEEEEEcC
Confidence 355677888766655 333344444443
No 327
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.57 E-value=2.2e-07 Score=98.74 Aligned_cols=86 Identities=9% Similarity=0.048 Sum_probs=70.4
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ- 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~- 129 (759)
+.+...+...+.. .++.+|||||||+|.++..|++.+ .+|+++|+++.+++.+++++. ..++++++++|+.+++
T Consensus 36 ~~i~~~Iv~~l~~---~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 36 KNFVNKAVESANL---TKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTSCG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhCCc
Confidence 4455556666554 577899999999999999999985 469999999999999988875 4568999999999876
Q ss_pred --CcccEEEeCCCC
Q 004354 130 --GGLDALMEPELG 141 (759)
Q Consensus 130 --gtfD~Ii~~~~~ 141 (759)
..||+|+++...
T Consensus 111 ~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 111 NKLDFNKVVANLPY 124 (295)
T ss_dssp GGSCCSEEEEECCG
T ss_pred ccCCccEEEEeCcc
Confidence 569999987543
No 328
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.57 E-value=2.2e-07 Score=98.44 Aligned_cols=112 Identities=13% Similarity=0.102 Sum_probs=84.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+...++ .+|++||+++.+++.|++.+ |+ .++++++.+|+.++ .
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 135 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDS--PRRKEVRIQGWEEF----D-------- 135 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCC--SSCEEEEECCGGGC----C--------
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCC--CCceEEEECCHHHc----C--------
Confidence 4456999999999999999988876 69999999999999999987 44 45899999998654 2
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCC---CCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA---ADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp---~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
..||+|+..- ....+..|. ..-.-..+|+.+.+.|+|||.|++..+...
T Consensus 136 ------------------------~~fD~v~~~~----~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 136 ------------------------EPVDRIVSLG----AFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ------------------------CCCSEEEEES----CGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ------------------------CCccEEEEcc----hHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 5799999731 111111110 001126899999999999999999877654
Q ss_pred h
Q 004354 682 Q 682 (759)
Q Consensus 682 ~ 682 (759)
.
T Consensus 188 ~ 188 (302)
T 3hem_A 188 D 188 (302)
T ss_dssp C
T ss_pred C
Confidence 3
No 329
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.57 E-value=8.8e-08 Score=104.33 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=76.3
Q ss_pred CCCeEEEECCCcchhHHHHHHhCC-CeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCCCcccEEEeCCCChhH--
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGF-HGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQGGLDALMEPELGHKL-- 144 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~-~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~gtfD~Ii~~~~~~~~-- 144 (759)
+..+|||||||+|.++..+++... .+++++|+ +.+++.+++ .++++++.+|+.+....||+|++....|+.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-----~~~v~~~~~d~~~~~~~~D~v~~~~vlh~~~d 266 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG-----NENLNFVGGDMFKSIPSADAVLLKWVLHDWND 266 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-----CSSEEEEECCTTTCCCCCSEEEEESCGGGSCH
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-----CCCcEEEeCccCCCCCCceEEEEcccccCCCH
Confidence 457999999999999999998743 26999999 677765432 356999999998722569999998765543
Q ss_pred --HHHHHHHHHHhccc---CcEEEEEEcC
Q 004354 145 --GNQYLSEVKRLLKS---GGKFVCLTLA 168 (759)
Q Consensus 145 --~~~~l~ei~rvLkp---GG~liiit~~ 168 (759)
...++++++++|+| ||++++.++.
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 45999999999999 9999998754
No 330
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.57 E-value=7.5e-08 Score=96.20 Aligned_cols=109 Identities=15% Similarity=0.123 Sum_probs=80.1
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-C-CCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-D-KSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~-~-~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+||.+|+|+|.++..+.... ..+|++||+||.+++.|++.+.... . ++++++.+|+.+++....
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~----------- 121 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQ-AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ----------- 121 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC-----------
T ss_pred CCeEEEcCCccCHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc-----------
Confidence 4689999999999988765553 3589999999999999999872211 1 589999999988754321
Q ss_pred cccccccCCCCCCCCCCCCCCCc-eeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHH--HHccCcCcEEEEEecCCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNAR-VDILIIDVDSPDSSSGMTCPAADFVEGSFLLTV--KDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~-yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~--~~~L~~~Gilv~N~~~~~ 681 (759)
... ||+|++|.. . ..-...++++.+ .+.|+|||+|++......
T Consensus 122 --------------------~~~~fD~I~~~~~---~--------~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 122 --------------------NQPHFDVVFLDPP---F--------HFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp --------------------SSCCEEEEEECCC---S--------SSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred --------------------cCCCCCEEEECCC---C--------CCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 257 999999532 0 001135678888 557999999998775543
No 331
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.57 E-value=4.7e-07 Score=98.17 Aligned_cols=101 Identities=14% Similarity=0.180 Sum_probs=78.9
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC------C---CCcEEEEeecccCC-------Cc
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD------R---SDMRWRVMDMTSMQ-------GG 131 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~------~---~~i~f~~~D~~~~~-------gt 131 (759)
.+.+||+||||+|.++..+++.+..+|+++|+++.+++.+++.+... . ++++++.+|+..+. ++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 46799999999999999999887778999999999999999886421 1 26999999987643 67
Q ss_pred ccEEEeCCCC------h-hH-HHHHHHHH----HHhcccCcEEEEEEcC
Q 004354 132 LDALMEPELG------H-KL-GNQYLSEV----KRLLKSGGKFVCLTLA 168 (759)
Q Consensus 132 fD~Ii~~~~~------~-~~-~~~~l~ei----~rvLkpGG~liiit~~ 168 (759)
||+|++.... . .. ...+++.+ .++|+|||.+++-+-+
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 9999986422 1 11 34555555 9999999999987654
No 332
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.57 E-value=3.8e-07 Score=100.44 Aligned_cols=115 Identities=14% Similarity=0.142 Sum_probs=88.2
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCC---------------------------------------C
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGF---------------------------------------H 92 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~---------------------------------------~ 92 (759)
.+...+...... .++..|||++||+|.++..++..+. .
T Consensus 181 ~LAaall~l~~~---~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 181 NMAAAIILLSNW---FPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp HHHHHHHHHTTC---CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred HHHHHHHHHhCC---CCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 444445555443 5678999999999999988876432 2
Q ss_pred eEEEEeCCHHHHHHHHHHhccCC--CCcEEEEeecccCC--CcccEEEeCCCC------hhHHHHHHHHHHHhccc--Cc
Q 004354 93 GITNVDFSKVVISDMLRRNVRDR--SDMRWRVMDMTSMQ--GGLDALMEPELG------HKLGNQYLSEVKRLLKS--GG 160 (759)
Q Consensus 93 ~VtgIDiS~~~I~~a~~r~~~~~--~~i~f~~~D~~~~~--gtfD~Ii~~~~~------~~~~~~~l~ei~rvLkp--GG 160 (759)
.|+|+|+|+.+++.|++++...+ ..++|.++|+.+++ ..||+|+++... ......+.+++.+.||+ ||
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~ 337 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTW 337 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTS
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCc
Confidence 49999999999999999876544 35899999999887 789999998632 23367777788888876 99
Q ss_pred EEEEEEcCc
Q 004354 161 KFVCLTLAE 169 (759)
Q Consensus 161 ~liiit~~~ 169 (759)
.+++++-..
T Consensus 338 ~~~iit~~~ 346 (384)
T 3ldg_A 338 SQFILTNDT 346 (384)
T ss_dssp EEEEEESCT
T ss_pred EEEEEECCH
Confidence 999888643
No 333
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.56 E-value=2.1e-07 Score=93.31 Aligned_cols=147 Identities=12% Similarity=0.120 Sum_probs=99.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||.|.|.++..+.... |..++++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~---------- 101 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKI----P---------- 101 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBC----S----------
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccC----C----------
Confidence 345799999999999988888876 6779999999999999999987211123799999996542 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCCh----
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ---- 682 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~---- 682 (759)
..+.+||+|+.... ...+ + -...+|+.+.+.|+|||.+++..+....
T Consensus 102 -------------------~~~~~fD~v~~~~~----l~~~---~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~ 152 (219)
T 3dh0_A 102 -------------------LPDNTVDFIFMAFT----FHEL---S---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKG 152 (219)
T ss_dssp -------------------SCSSCEEEEEEESC----GGGC---S---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSS
T ss_pred -------------------CCCCCeeEEEeehh----hhhc---C---CHHHHHHHHHHHhCCCeEEEEEEecccccccC
Confidence 11367999998321 1111 0 1278999999999999999886543221
Q ss_pred ------hHHHHHHHHHHHh-cCceEEEeecCCccEEEEEecCC
Q 004354 683 ------ATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLSSE 718 (759)
Q Consensus 683 ------~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~~~ 718 (759)
-..+.+...+++. |..+-..... .....+++.+..
T Consensus 153 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~-~~~~~~~~~k~~ 194 (219)
T 3dh0_A 153 PPPEEVYSEWEVGLILEDAGIRVGRVVEVG-KYCFGVYAMIVK 194 (219)
T ss_dssp CCGGGSCCHHHHHHHHHHTTCEEEEEEEET-TTEEEEEEECC-
T ss_pred CchhcccCHHHHHHHHHHCCCEEEEEEeeC-CceEEEEEEecc
Confidence 0134555666655 6555544433 355666666543
No 334
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.55 E-value=3.4e-07 Score=100.49 Aligned_cols=105 Identities=14% Similarity=0.145 Sum_probs=81.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.|| |+|.++..+....|..+|++||+||.++++|++++ |+ + +++++.+|+.+++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~--~-~v~~~~~D~~~~l~~~---------- 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGY--E-DIEIFTFDLRKPLPDY---------- 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTC--C-CEEEECCCTTSCCCTT----------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--C-CEEEEEChhhhhchhh----------
Confidence 357999999 99999998888877679999999999999999986 65 3 7999999987643210
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCc-EEEEEecC
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQG-LFIVNLVS 679 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~G-ilv~N~~~ 679 (759)
....||+|++|.--. +.. ...||+.+.+.|+||| ++++-+..
T Consensus 238 ---------------------~~~~fD~Vi~~~p~~---------~~~--~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 238 ---------------------ALHKFDTFITDPPET---------LEA--IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp ---------------------TSSCBSEEEECCCSS---------HHH--HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred ---------------------ccCCccEEEECCCCc---------hHH--HHHHHHHHHHHcccCCeEEEEEEec
Confidence 024799999964110 112 3789999999999999 55666654
No 335
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.55 E-value=4.3e-07 Score=91.17 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=79.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeEEEEccHHHHHHhhcccCccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSSSATD 602 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~-----~~rl~v~i~Da~~~l~~~~~~~~~~ 602 (759)
....+||.||+|.|.++..|....|..++++||+++.+++.|++.+.... .++++++.+|... ..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~------ 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY----QD------ 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS----CC------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc----cc------
Confidence 34579999999999999999998887899999999999999999974321 1389999999521 11
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 004354 603 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~ 677 (759)
....+||+|+.. .. -..+-. ..+|+.+++.|+|||++++..
T Consensus 98 -----------------------~~~~~fD~v~~~----~~-------l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 -----------------------KRFHGYDAATVI----EV-------IEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp -----------------------GGGCSCSEEEEE----SC-------GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -----------------------ccCCCcCEEeeH----HH-------HHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 012579999972 11 111221 579999999999999887654
No 336
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.55 E-value=2.2e-07 Score=97.27 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=88.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.+|.|.|.++..+... .|..++++||++|.+++.|++.+ |+ .++++++.+|+.+. ..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~---~~------- 178 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL--IERVTIKVRDISEG---FD------- 178 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC--GGGEEEECCCGGGC---CS-------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC--CCCEEEEECCHHHc---cc-------
Confidence 34569999999999999988888 56789999999999999999987 44 35799999997664 11
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChh
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 683 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~ 683 (759)
...||+|++|... | ..+++.+.+.|+|||.|++...+. .
T Consensus 179 ------------------------~~~~D~V~~~~~~---------~------~~~l~~~~~~L~pgG~l~~~~~~~--~ 217 (277)
T 1o54_A 179 ------------------------EKDVDALFLDVPD---------P------WNYIDKCWEALKGGGRFATVCPTT--N 217 (277)
T ss_dssp ------------------------CCSEEEEEECCSC---------G------GGTHHHHHHHEEEEEEEEEEESSH--H
T ss_pred ------------------------CCccCEEEECCcC---------H------HHHHHHHHHHcCCCCEEEEEeCCH--H
Confidence 2579999996421 1 468999999999999999877432 2
Q ss_pred HHHHHHHHHHH
Q 004354 684 TKDMVISRMKM 694 (759)
Q Consensus 684 ~~~~v~~~l~~ 694 (759)
....+.+.|++
T Consensus 218 ~~~~~~~~l~~ 228 (277)
T 1o54_A 218 QVQETLKKLQE 228 (277)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33445666655
No 337
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.55 E-value=1.8e-07 Score=93.52 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=79.1
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 609 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~ 609 (759)
..+||.+|+|+|.++..+.... ..+|++||+++.+++.|++.+....-++++++.+|+.+++...
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~-------------- 119 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQK-------------- 119 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSC--------------
T ss_pred CCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhc--------------
Confidence 4689999999999988766553 2489999999999999999872211158999999999986432
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHH--ccCcCcEEEEEecC
Q 004354 610 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKD--ALSEQGLFIVNLVS 679 (759)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~--~L~~~Gilv~N~~~ 679 (759)
..+||+|++|.. . ..-...++++.+.+ .|+|||+|++....
T Consensus 120 ------------------~~~fD~V~~~~p---~--------~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 120 ------------------GTPHNIVFVDPP---F--------RRGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ------------------CCCEEEEEECCS---S--------STTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ------------------CCCCCEEEECCC---C--------CCCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 257999999532 0 00123567888876 49999999977644
No 338
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.54 E-value=3.6e-07 Score=91.55 Aligned_cols=121 Identities=13% Similarity=0.047 Sum_probs=77.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
.+.+||.||.| ..+.++.+. +..+|++||.|++..+.|+++| |+...++++++++|+.+.+.-..
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~--------- 97 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGH--------- 97 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGC---------
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccc---------
Confidence 35799999985 455555553 4679999999999999999999 54225689999999765311000
Q ss_pred cccccccccCCCCCCCC---C--CCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEE-EecC
Q 004354 606 VVHGNEITSNNTRSCNG---N--CTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV-NLVS 679 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~---~--~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~-N~~~ 679 (759)
+.+. +....... . .......||+||+|.+.. ..++..+..+|+|||++++ |+..
T Consensus 98 ---p~~~--~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~---------------~~~~~~~l~~l~~GG~Iv~DNv~~ 157 (202)
T 3cvo_A 98 ---PVSD--AKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR---------------VGCALATAFSITRPVTLLFDDYSQ 157 (202)
T ss_dssp ---BSSS--TTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH---------------HHHHHHHHHHCSSCEEEEETTGGG
T ss_pred ---cccc--hhhhhHHHHhhhhhccccCCCCCEEEEeCCCc---------------hhHHHHHHHhcCCCeEEEEeCCcC
Confidence 0000 00000000 0 000136799999987432 3567777899999999988 6544
Q ss_pred CC
Q 004354 680 RS 681 (759)
Q Consensus 680 ~~ 681 (759)
+.
T Consensus 158 r~ 159 (202)
T 3cvo_A 158 RR 159 (202)
T ss_dssp CS
T ss_pred Cc
Confidence 43
No 339
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.54 E-value=3.7e-07 Score=97.87 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=94.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.+|.|.|..+..|...++ ..+|++||+++.+++.|++.+ |+ ++++++.+|+.++.. .
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~---~~v~~~~~D~~~~~~-~-------- 184 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV---LNVILFHSSSLHIGE-L-------- 184 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC---CSEEEESSCGGGGGG-G--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC---CeEEEEECChhhccc-c--------
Confidence 3456999999999999999998875 469999999999999999887 65 369999999876532 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC--------------ChHHHHHHHHHccCc
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 669 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f--------------~~~~fl~~~~~~L~~ 669 (759)
...||+|++|+..+. .|+-...+.. ....+|+.+.+.|+|
T Consensus 185 ------------------------~~~fD~Il~d~Pcsg--~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp 238 (315)
T 1ixk_A 185 ------------------------NVEFDKILLDAPCTG--SGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP 238 (315)
T ss_dssp ------------------------CCCEEEEEEECCTTS--TTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ------------------------cccCCEEEEeCCCCC--cccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 257999999975331 1211111111 125899999999999
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhcC
Q 004354 670 QGLFIVNLVSRSQATKDMVISRMKMVFN 697 (759)
Q Consensus 670 ~Gilv~N~~~~~~~~~~~v~~~l~~vF~ 697 (759)
||.|++...+......+.++..+.+-+.
T Consensus 239 GG~lv~stcs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 239 GGILVYSTCSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CCEEEEEeCCCChHHhHHHHHHHHhcCC
Confidence 9999987655544444455655544444
No 340
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.53 E-value=2.5e-07 Score=96.07 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=82.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+... +..+|++||++|.+++.|++.+ |+ .++++++.+|+.++ .
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 109 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGL--QNRVTGIVGSMDDL----P-------- 109 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCC--CcCcEEEEcChhhC----C--------
Confidence 45679999999999999999888 7779999999999999999886 54 46899999997442 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
....+||+|+..- . -..+--..+|+.+++.|+|||.+++...
T Consensus 110 ---------------------~~~~~fD~i~~~~----~-------~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 110 ---------------------FRNEELDLIWSEG----A-------IYNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp ---------------------CCTTCEEEEEESS----C-------GGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEEEEEEcC----C-------ceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1136799999821 1 1111237899999999999999987653
No 341
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.53 E-value=1.7e-07 Score=98.35 Aligned_cols=110 Identities=13% Similarity=0.134 Sum_probs=83.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
.+.+||.||+|.|.++..|... ..++++||+++.+++.|++.+.-. ..++++++.+|+.+.... .
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~----------- 133 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH-L----------- 133 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG-C-----------
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh-c-----------
Confidence 3579999999999999988887 469999999999999999987321 136899999998765321 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCCh
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ 682 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~ 682 (759)
+..||+|++.- ....+ | -...+|+.+++.|+|||.|++.......
T Consensus 134 --------------------~~~fD~v~~~~----~l~~~--~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 178 (285)
T 4htf_A 134 --------------------ETPVDLILFHA----VLEWV--A----DPRSVLQTLWSVLRPGGVLSLMFYNAHG 178 (285)
T ss_dssp --------------------SSCEEEEEEES----CGGGC--S----CHHHHHHHHHHTEEEEEEEEEEEEBHHH
T ss_pred --------------------CCCceEEEECc----hhhcc--c----CHHHHHHHHHHHcCCCeEEEEEEeCCch
Confidence 36799999831 11111 1 1167999999999999999998765543
No 342
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.53 E-value=1.3e-07 Score=98.55 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=82.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..+....|..++++||+++.+++.|++.+.-..-++++++.+|+.+..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~--------------- 100 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP--------------- 100 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC---------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC---------------
Confidence 45679999999999999999999988999999999999999999873222247999999976531
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
....+||+|+...- ...+ |. ...+|+.+++.|+|||.+++..
T Consensus 101 ------------------~~~~~fD~v~~~~~----l~~~--~~----~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 ------------------FEDSSFDHIFVCFV----LEHL--QS----PEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ------------------SCTTCEEEEEEESC----GGGC--SC----HHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeeEEEEech----hhhc--CC----HHHHHHHHHHHcCCCcEEEEEE
Confidence 11367999998321 1111 11 2589999999999999998854
No 343
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.53 E-value=7.7e-09 Score=106.77 Aligned_cols=110 Identities=11% Similarity=0.112 Sum_probs=79.4
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ- 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~- 129 (759)
+.....+...+.. .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++.. ...+++++++|+.+++
T Consensus 15 ~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~~~ 89 (245)
T 1yub_A 15 EKVLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQFQF 89 (245)
T ss_dssp TTTHHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTTTC
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhcCc
Confidence 3445556566543 567899999999999999999987 569999999999987766653 3457999999998876
Q ss_pred ---CcccEEEeCCCC---hhHHHHHH--------------HHHHHhcccCcEEEEEE
Q 004354 130 ---GGLDALMEPELG---HKLGNQYL--------------SEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 130 ---gtfD~Ii~~~~~---~~~~~~~l--------------~ei~rvLkpGG~liiit 166 (759)
++| .|+++... ......++ +.+.|+|+|||.+.++.
T Consensus 90 ~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 90 PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 468 66665311 11122222 56889999998766543
No 344
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.53 E-value=5.7e-07 Score=92.83 Aligned_cols=73 Identities=12% Similarity=0.180 Sum_probs=59.1
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
.+...+...+.. .++.+|||+|||+|.++..|++.+ .+|+|+|+|+.+++.++++... .++++++++|+.+++
T Consensus 17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~-~~~v~~~~~D~~~~~ 89 (244)
T 1qam_A 17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD-HDNFQVLNKDILQFK 89 (244)
T ss_dssp HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT-CCSEEEECCCGGGCC
T ss_pred HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc-CCCeEEEEChHHhCC
Confidence 344444444432 567899999999999999999987 4699999999999999888643 368999999998876
No 345
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.53 E-value=3.1e-07 Score=94.38 Aligned_cols=104 Identities=13% Similarity=0.084 Sum_probs=81.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..+....+. ++++||+++.+++.|++.+. .++++++.+|+.++ .
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~----~----------- 103 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDI----A----------- 103 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGC----C-----------
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhC----C-----------
Confidence 35689999999999999999888544 99999999999999999987 57899999997542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
.....||+|+... ....+ . --..+|+.+++.|+|||.|++.+.
T Consensus 104 ------------------~~~~~fD~v~~~~----~l~~~----~--~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 104 ------------------IEPDAYNVVLSSL----ALHYI----A--SFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp ------------------CCTTCEEEEEEES----CGGGC----S--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------------CCCCCeEEEEEch----hhhhh----h--hHHHHHHHHHHHcCCCcEEEEEeC
Confidence 1136899999832 11111 0 127899999999999999998753
No 346
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.53 E-value=2.3e-07 Score=94.88 Aligned_cols=117 Identities=19% Similarity=0.184 Sum_probs=87.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||++|.|.|.++..+... ..++++||+++.+++.|++.+ ++ +++++++.+|..+...
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~~~------------ 154 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNL--GKNVKFFNVDFKDAEV------------ 154 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTC--CTTEEEECSCTTTSCC------------
T ss_pred CCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCC--CCcEEEEEcChhhccc------------
Confidence 4569999999999999888887 569999999999999999986 44 4679999998755310
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
....||+|+.|..+ | ..+++.+.+.|+|||.+++..... ...
T Consensus 155 ---------------------~~~~~D~v~~~~~~---------~------~~~l~~~~~~L~~gG~l~~~~~~~--~~~ 196 (248)
T 2yvl_A 155 ---------------------PEGIFHAAFVDVRE---------P------WHYLEKVHKSLMEGAPVGFLLPTA--NQV 196 (248)
T ss_dssp ---------------------CTTCBSEEEECSSC---------G------GGGHHHHHHHBCTTCEEEEEESSH--HHH
T ss_pred ---------------------CCCcccEEEECCcC---------H------HHHHHHHHHHcCCCCEEEEEeCCH--HHH
Confidence 12569999985421 1 467899999999999999877433 333
Q ss_pred HHHHHHHHHhcCce
Q 004354 686 DMVISRMKMVFNHL 699 (759)
Q Consensus 686 ~~v~~~l~~vF~~v 699 (759)
..+...+.+.|..+
T Consensus 197 ~~~~~~l~~~f~~~ 210 (248)
T 2yvl_A 197 IKLLESIENYFGNL 210 (248)
T ss_dssp HHHHHHSTTTEEEE
T ss_pred HHHHHHHHhhCCcc
Confidence 44555555445543
No 347
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.52 E-value=3.1e-07 Score=94.44 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=81.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+....+. +|++||+++.+++.|++.+ |+ .++++++.+|+.++ .
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 109 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANC--ADRVKGITGSMDNL----P-------- 109 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----S--------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECChhhC----C--------
Confidence 34569999999999999999999875 9999999999999999886 44 56799999997432 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..+..||+|+..- . + .++--..+|+.+++.|+|||.+++..
T Consensus 110 ---------------------~~~~~fD~v~~~~----~---l----~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 110 ---------------------FQNEELDLIWSEG----A---I----YNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp ---------------------SCTTCEEEEEEES----C---S----CCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---------------------CCCCCEEEEEecC----h---H----hhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 1136899999842 1 1 11123689999999999999998765
No 348
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.52 E-value=4.4e-07 Score=104.45 Aligned_cols=161 Identities=10% Similarity=0.092 Sum_probs=108.7
Q ss_pred cccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh----C---------------CCeEEEEeCCHHHHHH
Q 004354 46 WYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA----G---------------FHGITNVDFSKVVISD 106 (759)
Q Consensus 46 W~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~----G---------------~~~VtgIDiS~~~I~~ 106 (759)
+|.+ ..+...+.+.+.. .++.+|||+|||+|.++..+++. + ..+++|+|+++.+++.
T Consensus 151 fyTP-~~iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 151 YFTP-RPLIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp CCCC-HHHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred eeCC-HHHHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 4433 4455666677654 56789999999999999887653 1 1259999999999999
Q ss_pred HHHHhccCC-CC-----cEEEEeecccCC----CcccEEEeCCCCh----------------hHHHHHHHHHHHhcccCc
Q 004354 107 MLRRNVRDR-SD-----MRWRVMDMTSMQ----GGLDALMEPELGH----------------KLGNQYLSEVKRLLKSGG 160 (759)
Q Consensus 107 a~~r~~~~~-~~-----i~f~~~D~~~~~----gtfD~Ii~~~~~~----------------~~~~~~l~ei~rvLkpGG 160 (759)
|+.++.-.+ .. ..+.++|....+ +.||+|++++... .....++..+.+.|+|||
T Consensus 227 A~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 227 ALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp HHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 887764333 22 788999986543 6899999975211 112478999999999999
Q ss_pred EEEEEEcCc--------hhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCCC
Q 004354 161 KFVCLTLAE--------SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENS 213 (759)
Q Consensus 161 ~liiit~~~--------~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~~ 213 (759)
++.++.... ..+++.++.. ++...+..++..--...+.+..+++++|.+.
T Consensus 307 r~a~V~p~~~L~~~~~~~~iR~~L~~~---~~l~~ii~Lp~~~F~~t~v~t~Ilvl~k~~~ 364 (541)
T 2ar0_A 307 RAAVVVPDNVLFEGGKGTDIRRDLMDK---CHLHTILRLPTGIFYAQGVKTNVLFFTKGTV 364 (541)
T ss_dssp EEEEEEEHHHHHCCTHHHHHHHHHHHH---EEEEEEEECCSSCSSSCSCCEEEEEEEEBCS
T ss_pred EEEEEecCcceecCcHHHHHHHHHhhc---CCEEEEEEcCcCcccCCCCcEEEEEEECCCC
Confidence 999886321 1233444433 2333444444422234567889999998764
No 349
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.51 E-value=6e-07 Score=93.39 Aligned_cols=74 Identities=11% Similarity=0.198 Sum_probs=61.9
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
+.+...+...+.. .++.+|||||||+|.++..|++.+ .+|+++|+++.+++.++++... .++++++++|+.+++
T Consensus 15 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 15 SFVLQKIVSAIHP---QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFD 88 (255)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCC
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCC
Confidence 3455556666654 577899999999999999999887 5699999999999999988754 568999999999876
No 350
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.51 E-value=3.6e-07 Score=90.90 Aligned_cols=120 Identities=15% Similarity=0.222 Sum_probs=86.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..+... +..++++||+++.+++.|++.+....-++++++.+|+.++.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--------------- 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV--------------- 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC---------------
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC---------------
Confidence 34579999999999999988875 66799999999999999999873211223999999975531
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHH
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 687 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~ 687 (759)
..+||+|+.+. +.+. -..+++.+.+.|+|||.+++...... ..+.
T Consensus 123 --------------------~~~fD~i~~~~------------~~~~-~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~ 167 (205)
T 3grz_A 123 --------------------DGKFDLIVANI------------LAEI-LLDLIPQLDSHLNEDGQVIFSGIDYL--QLPK 167 (205)
T ss_dssp --------------------CSCEEEEEEES------------CHHH-HHHHGGGSGGGEEEEEEEEEEEEEGG--GHHH
T ss_pred --------------------CCCceEEEECC------------cHHH-HHHHHHHHHHhcCCCCEEEEEecCcc--cHHH
Confidence 25799999953 1111 26789999999999999998643332 2334
Q ss_pred HHHHHHHh-cCc
Q 004354 688 VISRMKMV-FNH 698 (759)
Q Consensus 688 v~~~l~~v-F~~ 698 (759)
+...+.+. |..
T Consensus 168 ~~~~~~~~Gf~~ 179 (205)
T 3grz_A 168 IEQALAENSFQI 179 (205)
T ss_dssp HHHHHHHTTEEE
T ss_pred HHHHHHHcCCce
Confidence 45555544 443
No 351
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.51 E-value=4.2e-07 Score=92.81 Aligned_cols=105 Identities=13% Similarity=0.196 Sum_probs=81.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..+... ..+|++||+++.+++.|++. ++++.+|+.+++....
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~----------- 98 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLP----------- 98 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSC-----------
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcC-----------
Confidence 34579999999999999988887 45899999999999999876 7899999999875543
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
+.+||+|+.- .....+ +++ --..+|+.+++.|+|||.|++......
T Consensus 99 --------------------~~~fD~i~~~----~~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 99 --------------------DKYLDGVMIS----HFVEHL--DPE--RLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp --------------------TTCBSEEEEE----SCGGGS--CGG--GHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred --------------------CCCeeEEEEC----CchhhC--CcH--HHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 3689999982 111111 111 116899999999999999998876543
No 352
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.51 E-value=3.4e-07 Score=102.83 Aligned_cols=133 Identities=14% Similarity=0.114 Sum_probs=100.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.+|.|.|..+..|...+++ ..|++||+++..++.+++.. |+ .++.++.+|+.++.....
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~---~nv~v~~~Da~~l~~~~~------- 173 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGV---SNAIVTNHAPAELVPHFS------- 173 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTC---SSEEEECCCHHHHHHHHT-------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CceEEEeCCHHHhhhhcc-------
Confidence 34579999999999999989887654 69999999999999999875 66 359999999998865432
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC--------------ChHHHHHHHHHccCc
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSE 669 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f--------------~~~~fl~~~~~~L~~ 669 (759)
..||+|++|+-.+. .|+-...+.. +..++|..+.+.|+|
T Consensus 174 -------------------------~~FD~Il~DaPCSg--~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 174 -------------------------GFFDRIVVDAPCSG--EGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp -------------------------TCEEEEEEECCCCC--GGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred -------------------------ccCCEEEECCCCCC--ccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 57999999985432 1221111110 234889999999999
Q ss_pred CcEEEEEecCCChhHHHHHHHHHHHhcC
Q 004354 670 QGLFIVNLVSRSQATKDMVISRMKMVFN 697 (759)
Q Consensus 670 ~Gilv~N~~~~~~~~~~~v~~~l~~vF~ 697 (759)
||.|++...+...+..+.++..+.+-++
T Consensus 227 GG~LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 227 KGQLIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp EEEEEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred CcEEEEEEeecccccCHHHHHHHHHhCC
Confidence 9999998776666666677777766665
No 353
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.51 E-value=5.5e-07 Score=93.38 Aligned_cols=121 Identities=16% Similarity=0.155 Sum_probs=89.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.+|+|.|.++..+....+ ++++||+||.+++.|++.+....-+ ++++.+|+.+.+ .
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~---~----------- 181 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAAL---P----------- 181 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHG---G-----------
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcC---c-----------
Confidence 3457999999999999998888644 9999999999999999987321112 899999988753 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHH
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 687 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~ 687 (759)
..+||+|+.+... + .-..++..+.+.|+|||.+++.-.... ..+.
T Consensus 182 --------------------~~~fD~Vv~n~~~------------~-~~~~~l~~~~~~LkpgG~lils~~~~~--~~~~ 226 (254)
T 2nxc_A 182 --------------------FGPFDLLVANLYA------------E-LHAALAPRYREALVPGGRALLTGILKD--RAPL 226 (254)
T ss_dssp --------------------GCCEEEEEEECCH------------H-HHHHHHHHHHHHEEEEEEEEEEEEEGG--GHHH
T ss_pred --------------------CCCCCEEEECCcH------------H-HHHHHHHHHHHHcCCCCEEEEEeeccC--CHHH
Confidence 1569999985311 1 126799999999999999998643332 2345
Q ss_pred HHHHHHHh-cCceE
Q 004354 688 VISRMKMV-FNHLF 700 (759)
Q Consensus 688 v~~~l~~v-F~~v~ 700 (759)
+.+.+++. |.-+.
T Consensus 227 v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 227 VREAMAGAGFRPLE 240 (254)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCEEEE
Confidence 66677665 65443
No 354
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.51 E-value=7.9e-07 Score=89.59 Aligned_cols=140 Identities=15% Similarity=0.121 Sum_probs=89.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHH----HHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTML----NLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~----~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.||+|+|.++..|....+..+|++||++|.++ +.|++. +++.++.+|+.+......
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~~~~~~~------- 122 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASKPWKYSG------- 122 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTCGGGTTT-------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCCchhhcc-------
Confidence 345689999999999999999888766999999999865 444432 357888888654210000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC---
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR--- 680 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~--- 680 (759)
. ...||+|++|+.. + -....+++.+++.|+|||.|++.+..+
T Consensus 123 ----------------------~-~~~fD~V~~~~~~----------~--~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~ 167 (210)
T 1nt2_A 123 ----------------------I-VEKVDLIYQDIAQ----------K--NQIEILKANAEFFLKEKGEVVIMVKARSID 167 (210)
T ss_dssp ----------------------T-CCCEEEEEECCCS----------T--THHHHHHHHHHHHEEEEEEEEEEEEHHHHC
T ss_pred ----------------------c-ccceeEEEEeccC----------h--hHHHHHHHHHHHHhCCCCEEEEEEecCCcc
Confidence 0 2579999997411 1 112346899999999999999875221
Q ss_pred ---C-hhHHHHHHHHHHHhcCceEEEeecC--CccEEEEEe
Q 004354 681 ---S-QATKDMVISRMKMVFNHLFCLQLEE--DVNLVLFGL 715 (759)
Q Consensus 681 ---~-~~~~~~v~~~l~~vF~~v~~~~~~~--~~N~Vl~a~ 715 (759)
+ .+.....++.+++.|.-+-...... ..+.++++.
T Consensus 168 ~~~~~~~~~~~~~~~l~~~f~~~~~~~~~p~~~~h~~~~~~ 208 (210)
T 1nt2_A 168 STAEPEEVFKSVLKEMEGDFKIVKHGSLMPYHRDHIFIHAY 208 (210)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEEEEEECTTTCTTEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhhcEEeeeecCCCCCCCcEEEEEE
Confidence 1 1222223455666666555544422 234555554
No 355
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.51 E-value=2e-07 Score=98.80 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=68.2
Q ss_pred CCCCCeEEEECCC------cchhHHHHHHh-C-CCeEEEEeCCHHHHHHHHHHhccCCCCcEE-EEeecccCC--CcccE
Q 004354 66 SSPPPQILVPGCG------NSRLSEHLYDA-G-FHGITNVDFSKVVISDMLRRNVRDRSDMRW-RVMDMTSMQ--GGLDA 134 (759)
Q Consensus 66 ~~~~~~ILDlGCG------~G~ls~~L~~~-G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f-~~~D~~~~~--gtfD~ 134 (759)
..++.+|||+||| +|. ..+++. + -..|+|+|+|+. . ++++| +++|+++++ ++||+
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~~~~~~fD~ 126 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----SDADSTLIGDCATVHTANKWDL 126 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----CSSSEEEESCGGGCCCSSCEEE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----CCCEEEEECccccCCccCcccE
Confidence 3678899999994 476 333333 3 246999999996 1 36889 999999876 78999
Q ss_pred EEeCCCCh-------------hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 135 LMEPELGH-------------KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 135 Ii~~~~~~-------------~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
|+++...+ .....+++++.++|||||+|++..+..
T Consensus 127 Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 127 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp EEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred EEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 99963211 225689999999999999999977654
No 356
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.51 E-value=3.1e-07 Score=92.20 Aligned_cols=106 Identities=16% Similarity=0.190 Sum_probs=79.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeEEEEccHHHHHHhhcccCccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSSSATD 602 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~-----~~rl~v~i~Da~~~l~~~~~~~~~~ 602 (759)
..+.+||.||+|.|.++..|....|..++++||+++.+++.|++.+.... .++++++.+|+.. ..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~------ 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY----RD------ 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS----CC------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc----cc------
Confidence 35579999999999999999998887899999999999999999874211 1389999999621 11
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 004354 603 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~ 677 (759)
....+||+|+.. +. -..+-+ ..+|+.+++.|+|||+++...
T Consensus 98 -----------------------~~~~~fD~V~~~----~~-------l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 98 -----------------------KRFSGYDAATVI----EV-------IEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp -----------------------GGGTTCSEEEEE----SC-------GGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred -----------------------cccCCCCEEEEH----HH-------HHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 013679999972 11 122222 479999999999999877643
No 357
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.51 E-value=2.8e-07 Score=97.87 Aligned_cols=112 Identities=14% Similarity=0.095 Sum_probs=82.0
Q ss_pred CCCCeEEEEcccccHHHHHHH-HhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLH-ECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~-~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
....+||.||+|.|.....|. ...|..+|++||+++.+++.|++.+.-. ..++++++.+|+.+. .
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~--------- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKL----D--------- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGC----C---------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcC----C---------
Confidence 456799999999999988874 5668889999999999999999988321 246799999997763 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
. ...||+|+... ....+ +..-....+++.+++.|+|||.|++..+.+
T Consensus 184 --------------------~-~~~fD~v~~~~----~~~~~---~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 184 --------------------T-REGYDLLTSNG----LNIYE---PDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp --------------------C-CSCEEEEECCS----SGGGC---CCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred --------------------c-cCCeEEEEECC----hhhhc---CCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 1 26799999721 00000 111111248999999999999999877543
No 358
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.50 E-value=3e-07 Score=97.33 Aligned_cols=45 Identities=11% Similarity=0.183 Sum_probs=42.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF 573 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F 573 (759)
...+||.||+|.|.++..|...++..+|++||+|+.+++.|++..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~ 90 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNI 90 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 467999999999999999999998889999999999999999886
No 359
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.50 E-value=1.8e-06 Score=84.10 Aligned_cols=123 Identities=14% Similarity=0.147 Sum_probs=87.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
+...+||.||.|.|.++..+... ..++++||+++.+++.|++.+ ++++++.+|..+. .
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 102 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVD----Q----------- 102 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTS----C-----------
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccC----C-----------
Confidence 45679999999999999888887 459999999999999999987 3588999986542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHH
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 687 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~ 687 (759)
.....||+|++....- ..+ +++ .-..+|+.+.+.|+|||.+++............
T Consensus 103 ------------------~~~~~~D~i~~~~~~~---~~~--~~~--~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~ 157 (195)
T 3cgg_A 103 ------------------ISETDFDLIVSAGNVM---GFL--AED--GREPALANIHRALGADGRAVIGFGAGRGWVFGD 157 (195)
T ss_dssp ------------------CCCCCEEEEEECCCCG---GGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHH
T ss_pred ------------------CCCCceeEEEECCcHH---hhc--ChH--HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHH
Confidence 0135799999831100 000 000 126799999999999999999876554333445
Q ss_pred HHHHHHHh-cC
Q 004354 688 VISRMKMV-FN 697 (759)
Q Consensus 688 v~~~l~~v-F~ 697 (759)
+...+.+. |.
T Consensus 158 ~~~~l~~~Gf~ 168 (195)
T 3cgg_A 158 FLEVAERVGLE 168 (195)
T ss_dssp HHHHHHHHTEE
T ss_pred HHHHHHHcCCE
Confidence 55555544 44
No 360
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.50 E-value=2e-06 Score=82.91 Aligned_cols=115 Identities=9% Similarity=0.047 Sum_probs=87.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.+|.|.|.++..+.. +..++++||+++.+++.|++.+....-++++++.+|+.+.+..
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~------------- 98 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK------------- 98 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG-------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC-------------
Confidence 3456999999999999988887 6779999999999999999987221125799999998874221
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHH
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 687 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~ 687 (759)
..||+|+++.. -.-..+++.+++. |||.+++.... ......
T Consensus 99 ---------------------~~~D~i~~~~~--------------~~~~~~l~~~~~~--~gG~l~~~~~~--~~~~~~ 139 (183)
T 2yxd_A 99 ---------------------LEFNKAFIGGT--------------KNIEKIIEILDKK--KINHIVANTIV--LENAAK 139 (183)
T ss_dssp ---------------------CCCSEEEECSC--------------SCHHHHHHHHHHT--TCCEEEEEESC--HHHHHH
T ss_pred ---------------------CCCcEEEECCc--------------ccHHHHHHHHhhC--CCCEEEEEecc--cccHHH
Confidence 46999999432 1236799999988 99999987743 333445
Q ss_pred HHHHHHHhc
Q 004354 688 VISRMKMVF 696 (759)
Q Consensus 688 v~~~l~~vF 696 (759)
+.+.+++..
T Consensus 140 ~~~~l~~~g 148 (183)
T 2yxd_A 140 IINEFESRG 148 (183)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 677777664
No 361
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.50 E-value=2.3e-07 Score=96.37 Aligned_cols=105 Identities=8% Similarity=0.026 Sum_probs=77.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-----------------CCCCCeEEEEccHHHH
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-----------------TQDKSLKVHITDGIKF 591 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-----------------~~~~rl~v~i~Da~~~ 591 (759)
...+||++|+|.|.++.+|... ..+|++||++|.+++.|++..++ ....+++++++|+.+.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4579999999999999999887 35999999999999999887654 1246899999997664
Q ss_pred HHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCc
Q 004354 592 VREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQG 671 (759)
Q Consensus 592 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~G 671 (759)
-.. ....||+|+. . .....+ |++ ....+++.+.+.|+|||
T Consensus 146 ~~~--------------------------------~~~~FD~V~~-~---~~l~~l--~~~--~~~~~l~~~~~~LkpGG 185 (252)
T 2gb4_A 146 PRA--------------------------------NIGKFDRIWD-R---GALVAI--NPG--DHDRYADIILSLLRKEF 185 (252)
T ss_dssp GGG--------------------------------CCCCEEEEEE-S---SSTTTS--CGG--GHHHHHHHHHHTEEEEE
T ss_pred Ccc--------------------------------cCCCEEEEEE-h---hhhhhC--CHH--HHHHHHHHHHHHcCCCe
Confidence 211 0257999985 1 111112 211 23579999999999999
Q ss_pred EEEE
Q 004354 672 LFIV 675 (759)
Q Consensus 672 ilv~ 675 (759)
.|++
T Consensus 186 ~l~l 189 (252)
T 2gb4_A 186 QYLV 189 (252)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9863
No 362
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.50 E-value=2e-07 Score=97.80 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=92.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.+|+|.|.++..+....+..+|++||++|.+++.|++.+....-+++.++.+|+.++ ..
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~-------------- 183 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL-------------- 183 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC--------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc--------------
Confidence 457999999999999999999877779999999999999999987332224688999998775 22
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCCh---hHH
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ---ATK 685 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~---~~~ 685 (759)
..+||+|++|.. . --.+++..+.+.|+|||++++....... ...
T Consensus 184 -------------------~~~~D~Vi~d~p------------~--~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~ 230 (272)
T 3a27_A 184 -------------------KDVADRVIMGYV------------H--KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERP 230 (272)
T ss_dssp -------------------TTCEEEEEECCC------------S--SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHH
T ss_pred -------------------cCCceEEEECCc------------c--cHHHHHHHHHHHcCCCCEEEEEEcCccccccccH
Confidence 257999999642 1 2256899999999999999987765422 334
Q ss_pred HHHHHHHHHhcC
Q 004354 686 DMVISRMKMVFN 697 (759)
Q Consensus 686 ~~v~~~l~~vF~ 697 (759)
...+..+.+.+.
T Consensus 231 ~~~~~~~~~~~~ 242 (272)
T 3a27_A 231 IERLKFYAEKNG 242 (272)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhC
Confidence 455667776554
No 363
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.49 E-value=1.9e-07 Score=93.36 Aligned_cols=103 Identities=9% Similarity=0.007 Sum_probs=74.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC------------CCCCeEEEEccHHHHHHhh
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT------------QDKSLKVHITDGIKFVREM 595 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~------------~~~rl~v~i~Da~~~l~~~ 595 (759)
+...+||.+|+|+|..+.+|... ..+|++||+++.+++.|++..+.. ...+++++++|+.+.-...
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 98 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence 34579999999999999999887 359999999999999999987541 1357999999976542110
Q ss_pred cccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcE
Q 004354 596 KSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGL 672 (759)
Q Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gi 672 (759)
..+||+|+.-. ....+ +.. ....+++.+++.|+|||.
T Consensus 99 --------------------------------~~~fD~v~~~~----~l~~l---~~~-~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 99 --------------------------------IGHCAAFYDRA----AMIAL---PAD-MRERYVQHLEALMPQACS 135 (203)
T ss_dssp --------------------------------HHSEEEEEEES----CGGGS---CHH-HHHHHHHHHHHHSCSEEE
T ss_pred --------------------------------CCCEEEEEECc----chhhC---CHH-HHHHHHHHHHHHcCCCcE
Confidence 04699998511 11111 110 124589999999999997
No 364
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.49 E-value=2.7e-07 Score=93.67 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=80.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
.+.+||.||+|+|.++..|....+ ++++||+++.+++.|++.+.- +++++.+|+.+. ..
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~---~~------------ 100 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD----GITYIHSRFEDA---QL------------ 100 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC---CC------------
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc---Cc------------
Confidence 456899999999999999988754 899999999999999999752 799999997664 11
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHH-HccCcCcEEEEEecCCC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVK-DALSEQGLFIVNLVSRS 681 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~-~~L~~~Gilv~N~~~~~ 681 (759)
+..||+|++-- ...-+. -...+|+.++ +.|+|||.|++......
T Consensus 101 -------------------~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 101 -------------------PRRYDNIVLTH----VLEHID------DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp -------------------SSCEEEEEEES----CGGGCS------SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred -------------------CCcccEEEEhh----HHHhhc------CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 36799999721 111111 1268999999 99999999998875543
No 365
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.49 E-value=1.2e-06 Score=86.69 Aligned_cols=139 Identities=15% Similarity=0.051 Sum_probs=95.1
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 609 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~ 609 (759)
..+||.||+|.|.++..|... ..++++||+++.+++.|++.+ ++++++.+|+.++- ..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~--~~------------- 99 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH-----PSVTFHHGTITDLS--DS------------- 99 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGGG--GS-------------
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-----CCCeEEeCcccccc--cC-------------
Confidence 579999999999999988887 459999999999999999984 36899999986641 11
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCCh-------
Q 004354 610 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ------- 682 (759)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~------- 682 (759)
+.+||+|+..- ....+ |+. --..+|+.+++.|+|||.+++.......
T Consensus 100 ------------------~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 153 (203)
T 3h2b_A 100 ------------------PKRWAGLLAWY----SLIHM--GPG--ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHP 153 (203)
T ss_dssp ------------------CCCEEEEEEES----SSTTC--CTT--THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCS
T ss_pred ------------------CCCeEEEEehh----hHhcC--CHH--HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhch
Confidence 36899999832 11111 111 1268999999999999999988755432
Q ss_pred ------hHHHHHHHHHHHh-cCceEEEeecCCccEEEEEec
Q 004354 683 ------ATKDMVISRMKMV-FNHLFCLQLEEDVNLVLFGLS 716 (759)
Q Consensus 683 ------~~~~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~~ 716 (759)
...+.+.+.+++. |.-+............+...+
T Consensus 154 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~~l~~~~ 194 (203)
T 3h2b_A 154 VATAYRWPLPELAQALETAGFQVTSSHWDPRFPHAYLTAEA 194 (203)
T ss_dssp SSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEEEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcchhhhhhh
Confidence 1234455556554 554444443343344444443
No 366
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.48 E-value=9.4e-07 Score=88.39 Aligned_cols=128 Identities=13% Similarity=0.142 Sum_probs=92.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|.... .++++||+++.+++.|++.+.- .++++++.+|+.++.
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~--------------- 110 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR--WSHISWAATDILQFS--------------- 110 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT--CSSEEEEECCTTTCC---------------
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc--CCCeEEEEcchhhCC---------------
Confidence 455799999999999999998874 5999999999999999999853 358999999976542
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh----HHHHHHHHHccCcCcEEEEEecCC---
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSR--- 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~----~~fl~~~~~~L~~~Gilv~N~~~~--- 680 (759)
...+||+|+.. .. -.++-+ ..+|+.+.+.|+|||.|++.....
T Consensus 111 -------------------~~~~fD~v~~~----~~-------l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 160 (216)
T 3ofk_A 111 -------------------TAELFDLIVVA----EV-------LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATC 160 (216)
T ss_dssp -------------------CSCCEEEEEEE----SC-------GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred -------------------CCCCccEEEEc----cH-------HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcc
Confidence 13679999983 11 112222 467999999999999999865221
Q ss_pred ----ChhHHHHHHHHHHHhcCceEEEee
Q 004354 681 ----SQATKDMVISRMKMVFNHLFCLQL 704 (759)
Q Consensus 681 ----~~~~~~~v~~~l~~vF~~v~~~~~ 704 (759)
.....+.+...+...|..+-.+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 188 (216)
T 3ofk_A 161 RRWGHVAGAETVITILTEALTEVERVQC 188 (216)
T ss_dssp HHTTCSCCHHHHHHHHHHHSEEEEEEEE
T ss_pred hhhhhhhhHHHHHHHHHhhccceEEEec
Confidence 112234456667777776554443
No 367
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.48 E-value=3.3e-06 Score=92.30 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=79.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+.+.+|..+++++|+ |.+++.|++.+ ++ .+|++++.+|..+ ...
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l--~~~v~~~~~d~~~---~~p-------- 266 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGL--ADRCEILPGDFFE---TIP-------- 266 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTT---CCC--------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCc--CCceEEeccCCCC---CCC--------
Confidence 4568999999999999999999999999999999 99999999987 44 5789999999651 111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChH---HHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG---SFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~---~fl~~~~~~L~~~Gilv~N 676 (759)
..||+|++- .. -..+-+. .+|+.+++.|+|||.|++.
T Consensus 267 ------------------------~~~D~v~~~----~v-------lh~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 267 ------------------------DGADVYLIK----HV-------LHDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp ------------------------SSCSEEEEE----SC-------GGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ------------------------CCceEEEhh----hh-------hccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 269999981 10 1122223 5999999999999988774
No 368
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.48 E-value=9.5e-07 Score=92.72 Aligned_cols=82 Identities=12% Similarity=0.041 Sum_probs=67.3
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC-
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ- 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~- 129 (759)
+.+...+...+.. .++ +|||||||+|.++..|++.+. +|+++|+++.+++.++++.. ..+++++++|+.+++
T Consensus 33 ~~i~~~Iv~~~~~---~~~-~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 33 EAHLRRIVEAARP---FTG-PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPW 105 (271)
T ss_dssp HHHHHHHHHHHCC---CCS-CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCG
T ss_pred HHHHHHHHHhcCC---CCC-eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCCh
Confidence 3455556666654 567 999999999999999999975 59999999999999988874 357999999998886
Q ss_pred ---CcccEEEeCC
Q 004354 130 ---GGLDALMEPE 139 (759)
Q Consensus 130 ---gtfD~Ii~~~ 139 (759)
..+|.|+++-
T Consensus 106 ~~~~~~~~iv~Nl 118 (271)
T 3fut_A 106 EEVPQGSLLVANL 118 (271)
T ss_dssp GGSCTTEEEEEEE
T ss_pred hhccCccEEEecC
Confidence 3689888864
No 369
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.48 E-value=3.8e-07 Score=93.66 Aligned_cols=103 Identities=12% Similarity=0.111 Sum_probs=79.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..|...+ ..++++||++|.+++.|++.+ |+ .++++++.+|+.+..
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~--~~~v~~~~~d~~~~~------------ 99 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGV--SERVHFIHNDAAGYV------------ 99 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEESCCTTCC------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECChHhCC------------
Confidence 345799999999999999998887 459999999999999999886 54 468999999975531
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
. +..||+|+.- ..- ..+ + --..+|+.+++.|+|||.|++..
T Consensus 100 ---------------------~-~~~fD~V~~~-~~~---~~~---~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 ---------------------A-NEKCDVAACV-GAT---WIA---G---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp ---------------------C-SSCEEEEEEE-SCG---GGT---S---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred ---------------------c-CCCCCEEEEC-CCh---Hhc---C---CHHHHHHHHHHHcCCCeEEEEec
Confidence 0 2579999971 111 001 1 12789999999999999988754
No 370
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.48 E-value=3.8e-07 Score=90.95 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=78.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||.|.|.++..|... ..+|++||+++.+++.|++.+.-..-++++++.+|+.+....
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~------------- 140 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQA------------- 140 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG-------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCcc-------------
Confidence 45679999999999999988888 469999999999999999987321124799999998764221
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
...||+|+++..-. .+. ..+.+.|+|||.|++.+..
T Consensus 141 --------------------~~~~D~i~~~~~~~-----------~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 141 --------------------RAPFDAIIVTAAPP-----------EIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp --------------------GCCEEEEEESSBCS-----------SCC-----THHHHTEEEEEEEEEEECS
T ss_pred --------------------CCCccEEEEccchh-----------hhh-----HHHHHhcccCcEEEEEEcC
Confidence 25799999963221 111 2578999999999999865
No 371
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.47 E-value=2.8e-07 Score=97.00 Aligned_cols=117 Identities=10% Similarity=0.045 Sum_probs=88.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.+|+|+|.++..+....+. +|++||++|.+++.|++.. |+ +++++++.+|+.++..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~--~~~v~~~~~D~~~~~~------------ 189 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFPG------------ 189 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCCC------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECCHHHhcc------------
Confidence 3579999999999999999888655 8999999999999999987 44 4579999999876632
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC----C
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR----S 681 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~----~ 681 (759)
..+||+|++|. |. ...+++..+.+.|+|||+|++-.... .
T Consensus 190 ----------------------~~~fD~Vi~~~------------p~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 233 (278)
T 2frn_A 190 ----------------------ENIADRILMGY------------VV--RTHEFIPKALSIAKDGAIIHYHNTVPEKLMP 233 (278)
T ss_dssp ----------------------CSCEEEEEECC------------CS--SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTT
T ss_pred ----------------------cCCccEEEECC------------ch--hHHHHHHHHHHHCCCCeEEEEEEeecccccc
Confidence 25799999953 21 12678999999999999998755432 1
Q ss_pred hhHHHHHHHHHHHhc
Q 004354 682 QATKDMVISRMKMVF 696 (759)
Q Consensus 682 ~~~~~~v~~~l~~vF 696 (759)
....+.+...+.+..
T Consensus 234 ~~~~~~i~~~~~~~G 248 (278)
T 2frn_A 234 REPFETFKRITKEYG 248 (278)
T ss_dssp TTTHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHcC
Confidence 333445555555543
No 372
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.47 E-value=6.8e-07 Score=93.32 Aligned_cols=115 Identities=17% Similarity=0.221 Sum_probs=88.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHh-CCCCcEEEEEcCHHHHHHHHhhc----C-CCCCCCeEEEEccHHHHHHhhcccCcc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHEC-MPFVGIEAVELDLTMLNLAEDYF----G-FTQDKSLKVHITDGIKFVREMKSSSAT 601 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~-~p~~~i~~VEiDp~v~~vA~~~F----g-l~~~~rl~v~i~Da~~~l~~~~~~~~~ 601 (759)
....+||.+|+|.|.++..|... .|..++++||+++.+++.|++.+ | + .++++++.+|+.+.. .
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~--~~~v~~~~~d~~~~~--~------ 167 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP--PDNWRLVVSDLADSE--L------ 167 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC--CTTEEEECSCGGGCC--C------
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC--CCcEEEEECchHhcC--C------
Confidence 34569999999999999888885 46789999999999999999986 3 2 357999999976531 1
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 602 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
....||+|++|+... .++++.+.+.|+|||.+++...+.
T Consensus 168 -------------------------~~~~~D~v~~~~~~~---------------~~~l~~~~~~L~pgG~l~~~~~~~- 206 (280)
T 1i9g_A 168 -------------------------PDGSVDRAVLDMLAP---------------WEVLDAVSRLLVAGGVLMVYVATV- 206 (280)
T ss_dssp -------------------------CTTCEEEEEEESSCG---------------GGGHHHHHHHEEEEEEEEEEESSH-
T ss_pred -------------------------CCCceeEEEECCcCH---------------HHHHHHHHHhCCCCCEEEEEeCCH-
Confidence 135799999965311 368999999999999999987543
Q ss_pred hhHHHHHHHHHHH
Q 004354 682 QATKDMVISRMKM 694 (759)
Q Consensus 682 ~~~~~~v~~~l~~ 694 (759)
.....++..+++
T Consensus 207 -~~~~~~~~~l~~ 218 (280)
T 1i9g_A 207 -TQLSRIVEALRA 218 (280)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHh
Confidence 333455666665
No 373
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.47 E-value=6.7e-07 Score=85.41 Aligned_cols=129 Identities=16% Similarity=0.190 Sum_probs=88.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHH--HhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFV--REMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l--~~~~~~~~~~~~ 604 (759)
....+||.+|.|.|.++..+...+ |..++++||+++ ++++ ++++++.+|..+.- +....
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~------- 82 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLE------- 82 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHH-------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhc-------
Confidence 345699999999999999888885 567999999999 6532 57999999986641 11100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh--------HHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE--------GSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~--------~~fl~~~~~~L~~~Gilv~N 676 (759)
.....+||+|+.|..-.. . +....+ ..+++.+.+.|+|||.+++.
T Consensus 83 --------------------~~~~~~~D~i~~~~~~~~--~-----~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 135 (180)
T 1ej0_A 83 --------------------RVGDSKVQVVMSDMAPNM--S-----GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVK 135 (180)
T ss_dssp --------------------HHTTCCEEEEEECCCCCC--C-----SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------------cCCCCceeEEEECCCccc--c-----CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 001357999998542110 0 010001 58999999999999999987
Q ss_pred ecCCChhHHHHHHHHHHHhcCceEEEe
Q 004354 677 LVSRSQATKDMVISRMKMVFNHLFCLQ 703 (759)
Q Consensus 677 ~~~~~~~~~~~v~~~l~~vF~~v~~~~ 703 (759)
....... ..+...++..|..+....
T Consensus 136 ~~~~~~~--~~~~~~~~~~~~~~~~~~ 160 (180)
T 1ej0_A 136 VFQGEGF--DEYLREIRSLFTKVKVRK 160 (180)
T ss_dssp EESSTTH--HHHHHHHHHHEEEEEEEC
T ss_pred EecCCcH--HHHHHHHHHhhhhEEeec
Confidence 7654332 456777888888766554
No 374
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.47 E-value=7.2e-07 Score=85.71 Aligned_cols=136 Identities=16% Similarity=0.172 Sum_probs=92.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||.|.|.++..+..... ++++||+++.+++.|++. .++++++.+| ....
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-----~~~~----------- 72 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK-----FDSVITLSDP-----KEIP----------- 72 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-----CTTSEEESSG-----GGSC-----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-----CCCC-----------
Confidence 4556999999999999998888762 999999999999999998 3579999998 1111
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChh----
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA---- 683 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~---- 683 (759)
...||+|+..- ....+ + --..+++.+++.|+|||.+++..+.....
T Consensus 73 --------------------~~~~D~v~~~~----~l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 122 (170)
T 3i9f_A 73 --------------------DNSVDFILFAN----SFHDM---D---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGP 122 (170)
T ss_dssp --------------------TTCEEEEEEES----CSTTC---S---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSS
T ss_pred --------------------CCceEEEEEcc----chhcc---c---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCc
Confidence 36799999732 11111 1 13689999999999999998875543211
Q ss_pred ------HHHHHHHHHHHhcCceEEEeecCCccEEEEEecCC
Q 004354 684 ------TKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 718 (759)
Q Consensus 684 ------~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~ 718 (759)
..+.+.+.+. -|..+...... .....+++.+..
T Consensus 123 ~~~~~~~~~~~~~~l~-Gf~~~~~~~~~-~~~~~l~~~~~~ 161 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS-NFVVEKRFNPT-PYHFGLVLKRKT 161 (170)
T ss_dssp CGGGCCCHHHHHHHTT-TEEEEEEECSS-TTEEEEEEEECC
T ss_pred hHhhhcCHHHHHHHHh-CcEEEEccCCC-CceEEEEEecCC
Confidence 1233344444 45444444433 344555555444
No 375
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.47 E-value=3e-07 Score=93.72 Aligned_cols=139 Identities=19% Similarity=0.192 Sum_probs=97.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|.|.++..|....|..+|++||+||..++.|++.. |+ +++++++.+|+.+-+..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~i~~~~~d~l~~l~~----------- 81 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGL--KEKIQVRLANGLAAFEE----------- 81 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEECchhhhccc-----------
Confidence 346899999999999999999888889999999999999999886 65 56899999998764321
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
+.+||+|++ .|| -. -+-.++|..+...|+++|.||++-... .
T Consensus 82 ----------------------~~~~D~Ivi--------aG~---Gg-~~i~~Il~~~~~~L~~~~~lVlq~~~~-~--- 123 (225)
T 3kr9_A 82 ----------------------TDQVSVITI--------AGM---GG-RLIARILEEGLGKLANVERLILQPNNR-E--- 123 (225)
T ss_dssp ----------------------GGCCCEEEE--------EEE---CH-HHHHHHHHHTGGGCTTCCEEEEEESSC-H---
T ss_pred ----------------------CcCCCEEEE--------cCC---Ch-HHHHHHHHHHHHHhCCCCEEEEECCCC-H---
Confidence 125999987 122 11 123679999999999999999987632 2
Q ss_pred HHHHHHHHHh-cCceEEEeecCC--ccEEEEEecCC
Q 004354 686 DMVISRMKMV-FNHLFCLQLEED--VNLVLFGLSSE 718 (759)
Q Consensus 686 ~~v~~~l~~v-F~~v~~~~~~~~--~N~Vl~a~~~~ 718 (759)
..+...|.+. |.-+-..-+.++ .=+|+.+.+.+
T Consensus 124 ~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~~ 159 (225)
T 3kr9_A 124 DDLRIWLQDHGFQIVAESILEEAGKFYEILVVEAGQ 159 (225)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 2344445443 432222222222 23566666543
No 376
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.47 E-value=4.6e-07 Score=93.55 Aligned_cols=104 Identities=13% Similarity=0.235 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|....+ ++++||+++.+++.|++.+.-..-++++++.+|+.++ .
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l----~----------- 98 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM----P----------- 98 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CC----C-----------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhC----C-----------
Confidence 4567999999999999999988864 9999999999999999987211124799999996442 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
..+..||+|+... ....+ | --..+|..+++.|+|||.|++-
T Consensus 99 ------------------~~~~~fD~V~~~~----~l~~~--~----d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 99 ------------------FTDERFHIVTCRI----AAHHF--P----NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ------------------SCTTCEEEEEEES----CGGGC--S----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------------CCCCCEEEEEEhh----hhHhc--C----CHHHHHHHHHHHcCCCCEEEEE
Confidence 1136799999831 11111 1 1258999999999999988874
No 377
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.47 E-value=4.5e-07 Score=90.45 Aligned_cols=104 Identities=14% Similarity=0.181 Sum_probs=81.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|... ..++++||+++.+++.|++ .+. ++++++.+|+.++ ..
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~-~~~---~~~~~~~~d~~~~---~~----------- 104 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGR-HGL---DNVEFRQQDLFDW---TP----------- 104 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGG-GCC---TTEEEEECCTTSC---CC-----------
T ss_pred CCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHh-cCC---CCeEEEecccccC---CC-----------
Confidence 34569999999999999999888 4699999999999999999 332 6799999997654 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEecCCCh
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLVSRSQ 682 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~~~~~~ 682 (759)
..+||+|++.. . -.++-+ ..+|+.+++.|+|||.+++....+..
T Consensus 105 --------------------~~~~D~v~~~~----~-------l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 151 (218)
T 3ou2_A 105 --------------------DRQWDAVFFAH----W-------LAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHE 151 (218)
T ss_dssp --------------------SSCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC
T ss_pred --------------------CCceeEEEEec----h-------hhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCc
Confidence 36799999831 1 112222 67999999999999999988766643
No 378
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.45 E-value=3e-06 Score=84.84 Aligned_cols=99 Identities=14% Similarity=0.178 Sum_probs=77.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..|... ..++++||+++.+++.|++.+. .+++++.+|+.++ .
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~----~------------ 102 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSF----E------------ 102 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSC----C------------
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhc----C------------
Confidence 5579999999999999988887 4699999999999999999986 5789999886543 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEec
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
.. ..||+|+... . -..+-+ ..+|+.+++.|+|||.+++...
T Consensus 103 -----------------~~-~~fD~v~~~~----~-------l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 103 -----------------VP-TSIDTIVSTY----A-------FHHLTDDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp -----------------CC-SCCSEEEEES----C-------GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred -----------------CC-CCeEEEEECc----c-------hhcCChHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 11 5799999831 1 112222 3389999999999999998753
No 379
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.45 E-value=4.4e-07 Score=94.53 Aligned_cols=100 Identities=16% Similarity=0.127 Sum_probs=76.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
+...+||.||+|+|.++..|.... .+|++||+++.|++.|+++ ++++++++|+.+. .
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~----~----------- 94 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRH------PRVTYAVAPAEDT----G----------- 94 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCC------TTEEEEECCTTCC----C-----------
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhc------CCceeehhhhhhh----c-----------
Confidence 445789999999999999998875 5899999999999998753 5799999996432 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
..+..||+|++ .... ..+-...++..+++.|+|||+|++-...
T Consensus 95 ------------------~~~~sfD~v~~----~~~~-------h~~~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 95 ------------------LPPASVDVAIA----AQAM-------HWFDLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp ------------------CCSSCEEEEEE----CSCC-------TTCCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------------ccCCcccEEEE----eeeh-------hHhhHHHHHHHHHHHcCCCCEEEEEECC
Confidence 12478999998 2111 1122467999999999999999875543
No 380
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.45 E-value=3.1e-07 Score=94.55 Aligned_cols=108 Identities=12% Similarity=0.157 Sum_probs=82.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|...+ ..+|++||+++.+++.|++.+.-. ++++++.+|+.+. .
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~----~----------- 115 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTK----E----------- 115 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTC----C-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccC----C-----------
Confidence 456799999999999999888876 569999999999999999998642 7899999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
..+.+||+|+..- ....+ |+. --..+|+.+++.|+|||.+++....
T Consensus 116 ------------------~~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 116 ------------------FPENNFDLIYSRD----AILAL--SLE--NKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp ------------------CCTTCEEEEEEES----CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------------------CCCCcEEEEeHHH----HHHhc--ChH--HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 1136899999821 11111 001 1267999999999999999887643
No 381
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.44 E-value=4.1e-06 Score=87.89 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=84.9
Q ss_pred CCCeEEEEcccc---cHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHH--HHhhcccCcccc
Q 004354 529 KSVKAVVIGLGA---GLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF--VREMKSSSATDE 603 (759)
Q Consensus 529 ~~~~vLviGlG~---G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~--l~~~~~~~~~~~ 603 (759)
...+||.||+|. |.+...+....|..+|++||+||.|++.|++.+. ..++++++.+|..+. +-......
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~---- 150 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVR---- 150 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHH----
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhh----
Confidence 447999999999 9888888888898999999999999999999985 357899999998753 21000000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
. .....+||+|++- . . +..-+.. --..+|+.+++.|+|||.|++.....+
T Consensus 151 -~-------------------~~d~~~~d~v~~~--~--v---lh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 151 -R-------------------MIDFSRPAAIMLV--G--M---LHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp -H-------------------HCCTTSCCEEEET--T--T---GGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred -c-------------------cCCCCCCEEEEEe--c--h---hhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 0 0011479999871 1 0 1111111 236799999999999999998876654
No 382
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.44 E-value=2.5e-07 Score=93.07 Aligned_cols=107 Identities=17% Similarity=0.223 Sum_probs=79.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..+....+ ++++||++|.+++.|++.+... .++++++.+|..++ .
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~----~------------ 98 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDARKL----S------------ 98 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCTTSC----C------------
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc-CCCceEEECchhcC----C------------
Confidence 367999999999999999988865 9999999999999999987432 26799999996542 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
....+||+|++.- .-... +.. --..+++.+++.|+|||.+++....
T Consensus 99 -----------------~~~~~~D~v~~~~--~~~~~----~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 -----------------FEDKTFDYVIFID--SIVHF----EPL--ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp -----------------SCTTCEEEEEEES--CGGGC----CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------CCCCcEEEEEEcC--chHhC----CHH--HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 0135799999831 10000 000 1257999999999999999988654
No 383
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.44 E-value=3.2e-07 Score=91.20 Aligned_cols=113 Identities=15% Similarity=0.155 Sum_probs=82.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..+....+. ++++||+++.+++.|++.+.- .++++++.+|+.+. ..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~--~~------------ 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKL--DF------------ 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSC--CS------------
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcC--CC------------
Confidence 34579999999999999888887544 999999999999999998752 46899999997553 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcC---CCCC------ChHHHHHHHHHccCcCcEEEEEec
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCP---AADF------VEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scP---p~~f------~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
.+..||+|+...-- ..+.|. +... ....+|+.+.+.|+|||.+++...
T Consensus 104 -------------------~~~~fD~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 104 -------------------PSASFDVVLEKGTL----DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp -------------------CSSCEEEEEEESHH----HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred -------------------CCCcccEEEECcch----hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 13579999963200 000000 1110 126799999999999999998876
Q ss_pred CC
Q 004354 679 SR 680 (759)
Q Consensus 679 ~~ 680 (759)
..
T Consensus 161 ~~ 162 (215)
T 2pxx_A 161 AA 162 (215)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 384
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.44 E-value=3.2e-07 Score=93.78 Aligned_cols=106 Identities=18% Similarity=0.259 Sum_probs=78.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..|.... ..++++||+++.+++.|++.+.-....+++++.+|+.++ .
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~------------ 141 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDF----T------------ 141 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGC----C------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhc----C------------
Confidence 46799999999999998887765 459999999999999999998532234689999996543 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
....+||+|+++- ....+ |.+. -..+|+.+++.|+|||.|++.
T Consensus 142 -----------------~~~~~fD~v~~~~----~l~~~--~~~~--~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 142 -----------------PEPDSYDVIWIQW----VIGHL--TDQH--LAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp -----------------CCSSCEEEEEEES----CGGGS--CHHH--HHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------CCCCCEEEEEEcc----hhhhC--CHHH--HHHHHHHHHHhcCCCeEEEEE
Confidence 1135799999852 10001 0100 147999999999999998874
No 385
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.43 E-value=1.9e-06 Score=89.37 Aligned_cols=106 Identities=17% Similarity=0.220 Sum_probs=80.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+.... ..++++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 124 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGL--ANRVTFSYADAMDL----P-------- 124 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEECccccC----C--------
Confidence 455799999999999999998876 569999999999999999887 44 46899999997542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
..+..||+|+.- .....+ |. ...+|+.+++.|+|||.+++....
T Consensus 125 ---------------------~~~~~fD~v~~~----~~l~~~--~~----~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 125 ---------------------FEDASFDAVWAL----ESLHHM--PD----RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp ---------------------SCTTCEEEEEEE----SCTTTS--SC----HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCccEEEEe----chhhhC--CC----HHHHHHHHHHHcCCCeEEEEEEee
Confidence 113679999972 111111 11 278999999999999988876543
No 386
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.43 E-value=1.4e-06 Score=87.09 Aligned_cols=104 Identities=14% Similarity=0.171 Sum_probs=79.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+.+||.||+|.|.++..|... ..++++||+++.+++.|++. .++.++.+|..++.....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~----------- 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKV----------- 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCS-----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccc-----------
Confidence 35589999999999999988877 45999999999999999988 457889999877632211
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
....+||+|++...- . . + --..+|+.+++.|+|||.|++....
T Consensus 112 ------------------~~~~~fD~v~~~~~l----~-~--~----~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 112 ------------------PVGKDYDLICANFAL----L-H--Q----DIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp ------------------CCCCCEEEEEEESCC----C-S--S----CCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ------------------ccCCCccEEEECchh----h-h--h----hHHHHHHHHHHHhCCCeEEEEEecC
Confidence 113569999983211 0 1 1 1268999999999999999987653
No 387
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.43 E-value=9.3e-07 Score=97.47 Aligned_cols=136 Identities=15% Similarity=0.099 Sum_probs=92.1
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-CC-CeEEEEccHHHHHHhhcccCcccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DK-SLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~-~~-rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+||.+|+|+|.++..+... ...+|++||+++.+++.|++.+.... ++ +++++.+|+.+++.....
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~---------- 281 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR---------- 281 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH----------
Confidence 368999999999999988875 23489999999999999999873211 23 899999999999876531
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC-ChHHHHHHHHHccCcCcEEEEEecCCChhHHH
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-VEGSFLLTVKDALSEQGLFIVNLVSRSQATKD 686 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f-~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~ 686 (759)
.+.+||+|++|......+.+. -...+ .-.+++..+.+.|+|||+|++...+... ..+
T Consensus 282 -------------------~~~~fD~Ii~DPP~~~~~~~~--~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-~~~ 339 (385)
T 2b78_A 282 -------------------HHLTYDIIIIDPPSFARNKKE--VFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-TVS 339 (385)
T ss_dssp -------------------TTCCEEEEEECCCCC-----C--CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-CHH
T ss_pred -------------------hCCCccEEEECCCCCCCChhh--HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-CHH
Confidence 135799999975331100010 01100 0134778889999999999987754432 223
Q ss_pred HHHHHHHHhcCc
Q 004354 687 MVISRMKMVFNH 698 (759)
Q Consensus 687 ~v~~~l~~vF~~ 698 (759)
.+.+.+...+..
T Consensus 340 ~~~~~i~~~~~~ 351 (385)
T 2b78_A 340 QFKKQIEKGFGK 351 (385)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHH
Confidence 445555555543
No 388
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.42 E-value=2.7e-07 Score=101.50 Aligned_cols=97 Identities=12% Similarity=0.008 Sum_probs=78.1
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhccC---------------C-CCcEEEEeecccCC-
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNVRD---------------R-SDMRWRVMDMTSMQ- 129 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~~~---------------~-~~i~f~~~D~~~~~- 129 (759)
++.+|||+|||+|.++..++.. +...|+++|+++.+++.+++++... + .+++++++|+.+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 3679999999999999999987 5556999999999999999887543 3 23899999987654
Q ss_pred ---CcccEEEeCCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 130 ---GGLDALMEPELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 130 ---gtfD~Ii~~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+.||+|+.+... ....++..+.+.|++||.+++..
T Consensus 127 ~~~~~fD~I~lDP~~--~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFG--SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSS--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCC--CHHHHHHHHHHhcCCCCEEEEEe
Confidence 579999986532 23678899999999999766543
No 389
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.42 E-value=8.1e-07 Score=92.11 Aligned_cols=72 Identities=7% Similarity=0.157 Sum_probs=59.3
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
.+...+...+.. .++.+|||+|||+|.++..|++.|..+|+|+|+++.+++.++++ ...+++++++|+.+++
T Consensus 18 ~i~~~iv~~~~~---~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~---~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 18 GVLKKIAEELNI---EEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI---GDERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS---CCTTEEEECSCTTTCC
T ss_pred HHHHHHHHhcCC---CCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc---cCCCeEEEEcchhhCC
Confidence 455555566544 56789999999999999999998756799999999999988766 3467999999999886
No 390
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.42 E-value=7.6e-07 Score=90.48 Aligned_cols=105 Identities=14% Similarity=0.097 Sum_probs=80.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
+...+||.||.|.|.++..|... ..++++||+++.+++.|++... .++++++.+|+.+. .
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~----~----------- 111 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGE---GPDLSFIKGDLSSL----P----------- 111 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTC---BTTEEEEECBTTBC----S-----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcc---cCCceEEEcchhcC----C-----------
Confidence 35579999999999999988887 4599999999999999999863 57899999996543 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
..+..||+|+.-- ....+. -...+|+.+++.|+|||.+++.....
T Consensus 112 ------------------~~~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 112 ------------------FENEQFEAIMAIN----SLEWTE------EPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp ------------------SCTTCEEEEEEES----CTTSSS------CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------------CCCCCccEEEEcC----hHhhcc------CHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 1136899999721 111111 12589999999999999999887544
No 391
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.41 E-value=3e-07 Score=92.95 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=79.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-----CCCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeEEEEccHHHHHHhhccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECM-----PFVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKSS 598 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~-----p~~~i~~VEiDp~v~~vA~~~Fgl~~-----~~rl~v~i~Da~~~l~~~~~~ 598 (759)
...+||.||.|.|.++..+.... |..+|++||+++.+++.|++.+.-.. .++++++.+|+.+.......
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~- 158 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK- 158 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc-
Confidence 45799999999999999888876 45699999999999999999872111 35799999998774211000
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 599 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
....||+|+++.... . +++.+.+.|+|||.+++.+.
T Consensus 159 ----------------------------~~~~fD~I~~~~~~~-----------~-----~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ----------------------------ELGLFDAIHVGASAS-----------E-----LPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp ----------------------------HHCCEEEEEECSBBS-----------S-----CCHHHHHHEEEEEEEEEEEE
T ss_pred ----------------------------cCCCcCEEEECCchH-----------H-----HHHHHHHhcCCCcEEEEEEc
Confidence 025699999853221 1 34788999999999999986
Q ss_pred C
Q 004354 679 S 679 (759)
Q Consensus 679 ~ 679 (759)
.
T Consensus 195 ~ 195 (227)
T 2pbf_A 195 E 195 (227)
T ss_dssp E
T ss_pred c
Confidence 5
No 392
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.41 E-value=5.4e-07 Score=92.12 Aligned_cols=139 Identities=19% Similarity=0.184 Sum_probs=98.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|.|.++..|....|..+|++||+||..++.|++.. |+ .++++++.+|+.+.+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl--~~~I~~~~gD~l~~~~~----------- 87 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGL--TSKIDVRLANGLSAFEE----------- 87 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEECchhhcccc-----------
Confidence 446899999999999999999877779999999999999999886 65 56899999998876422
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
+.+||+|++ .||- . -+-.++|......|+++|.||+.-... .
T Consensus 88 ----------------------~~~~D~Ivi--------aGmG---g-~lI~~IL~~~~~~l~~~~~lIlqp~~~----~ 129 (230)
T 3lec_A 88 ----------------------ADNIDTITI--------CGMG---G-RLIADILNNDIDKLQHVKTLVLQPNNR----E 129 (230)
T ss_dssp ----------------------GGCCCEEEE--------EEEC---H-HHHHHHHHHTGGGGTTCCEEEEEESSC----H
T ss_pred ----------------------ccccCEEEE--------eCCc---h-HHHHHHHHHHHHHhCcCCEEEEECCCC----h
Confidence 136999987 1221 1 123679999999999999999887543 2
Q ss_pred HHHHHHHHHh-cCceEEEeecCC--ccEEEEEecCC
Q 004354 686 DMVISRMKMV-FNHLFCLQLEED--VNLVLFGLSSE 718 (759)
Q Consensus 686 ~~v~~~l~~v-F~~v~~~~~~~~--~N~Vl~a~~~~ 718 (759)
+.+...|.+. |.-+-..-+.++ .=+|+.+.+.+
T Consensus 130 ~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~~ 165 (230)
T 3lec_A 130 DDLRKWLAANDFEIVAEDILTENDKRYEILVVKHGH 165 (230)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEECC
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 2344444443 432222222222 34567776654
No 393
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.41 E-value=1.2e-06 Score=99.36 Aligned_cols=132 Identities=14% Similarity=0.192 Sum_probs=95.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
...+||.+|.|.|..+..|...++ ...|++||+++.+++.|++.+ |+ +++.++.+|+.++....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~---~nv~~~~~D~~~~~~~~--------- 184 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI---SNVALTHFDGRVFGAAV--------- 184 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC---CSEEEECCCSTTHHHHS---------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEeCCHHHhhhhc---------
Confidence 456999999999999999999875 469999999999999999886 65 36999999998764322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCC-cCCCCC-------------ChHHHHHHHHHccCcC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMT-CPAADF-------------VEGSFLLTVKDALSEQ 670 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~s-cPp~~f-------------~~~~fl~~~~~~L~~~ 670 (759)
...||+|++|+..+. .|+- --|... +..++|..+.+.|+||
T Consensus 185 -----------------------~~~fD~Il~D~PcSg--~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 239 (479)
T 2frx_A 185 -----------------------PEMFDAILLDAPCSG--EGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPG 239 (479)
T ss_dssp -----------------------TTCEEEEEEECCCCC--GGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred -----------------------cccCCEEEECCCcCC--cccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 257999999985432 1221 112111 1357899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhcC
Q 004354 671 GLFIVNLVSRSQATKDMVISRMKMVFN 697 (759)
Q Consensus 671 Gilv~N~~~~~~~~~~~v~~~l~~vF~ 697 (759)
|.|++-..+-.....+.++..+.+-++
T Consensus 240 G~LvysTcs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 240 GTLVYSTCTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp EEEEEEESCCSSTTTHHHHHHHHHHST
T ss_pred CEEEEecccCCcccCHHHHHHHHHHCC
Confidence 999987655443333445555544444
No 394
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.41 E-value=9.7e-07 Score=90.17 Aligned_cols=101 Identities=15% Similarity=0.239 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|+|.++..+....+ ++++||+++.+++.|++.+ |+ ++++++.+|+.++ .
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~----~-------- 82 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGV---ENVRFQQGTAESL----P-------- 82 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTC---CSEEEEECBTTBC----C--------
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCC---CCeEEEecccccC----C--------
Confidence 4567999999999999999988763 8999999999999999887 44 4799999996432 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
..+..||+|+...- ...+ + --..+|+.+++.|+|||.+++-
T Consensus 83 ---------------------~~~~~fD~v~~~~~----l~~~--~----~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 83 ---------------------FPDDSFDIITCRYA----AHHF--S----DVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ---------------------SCTTCEEEEEEESC----GGGC--S----CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------CCCCcEEEEEECCc----hhhc--c----CHHHHHHHHHHHcCCCcEEEEE
Confidence 11367999998421 0011 1 1268999999999999988874
No 395
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.40 E-value=4e-07 Score=96.29 Aligned_cols=110 Identities=20% Similarity=0.221 Sum_probs=82.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCC--CCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFT--QDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~--~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..|...+ +..+|++||+++.+++.|++.+... ..++++++++|+.++--...
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-------- 106 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGA-------- 106 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCT--------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcccc--------
Confidence 356899999999999999999886 7889999999999999999987321 25789999999865321100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~ 675 (759)
......+||+|++.. . -..+--..+|+.+++.|+|||.|++
T Consensus 107 -------------------~~~~~~~fD~V~~~~----~-------l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 107 -------------------DSVDKQKIDMITAVE----C-------AHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp -------------------TTTTSSCEEEEEEES----C-------GGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------ccccCCCeeEEeHhh----H-------HHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 000125799999831 1 1112336799999999999999987
No 396
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.40 E-value=6.9e-07 Score=98.25 Aligned_cols=102 Identities=12% Similarity=0.092 Sum_probs=83.2
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC---------------CCCCeEEEEccHHHHHHh
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT---------------QDKSLKVHITDGIKFVRE 594 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~---------------~~~rl~v~i~Da~~~l~~ 594 (759)
..+||.+|.|.|+++..+....+..+|++||+|+..++.|++..... .-++++++.+|+.+++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 46899999999999999888877778999999999999999876221 112399999999999876
Q ss_pred hcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEE
Q 004354 595 MKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
.. .+||+|++|.+.. ..+|+..+.+.|+++|++.
T Consensus 128 ~~--------------------------------~~fD~I~lDP~~~--------------~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 128 RH--------------------------------RYFHFIDLDPFGS--------------PMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp ST--------------------------------TCEEEEEECCSSC--------------CHHHHHHHHHHEEEEEEEE
T ss_pred cc--------------------------------CCCCEEEeCCCCC--------------HHHHHHHHHHhcCCCCEEE
Confidence 42 4699999975421 1689999999999999988
Q ss_pred EEe
Q 004354 675 VNL 677 (759)
Q Consensus 675 ~N~ 677 (759)
+..
T Consensus 162 vt~ 164 (378)
T 2dul_A 162 VTA 164 (378)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 397
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.40 E-value=1.1e-06 Score=89.04 Aligned_cols=106 Identities=14% Similarity=0.144 Sum_probs=78.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|....+ ++++||+++.+++.|++.+ ++++++.+|+.++ .
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDF----R----------- 96 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTC----C-----------
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHc----c-----------
Confidence 3557999999999999988888764 8999999999999999986 3589999987543 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
. ...||+|++-...- ..+ +..---..+|+.+++.|+|||.|++.....
T Consensus 97 ------------------~-~~~~D~v~~~~~~~---~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 97 ------------------L-GRKFSAVVSMFSSV---GYL---KTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp ------------------C-SSCEEEEEECTTGG---GGC---CSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred ------------------c-CCCCcEEEEcCchH---hhc---CCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 0 25799999511110 000 000012579999999999999999876443
No 398
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.39 E-value=1.7e-06 Score=91.43 Aligned_cols=142 Identities=11% Similarity=0.106 Sum_probs=93.2
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
..+||.||.|.|.++..|... |..+|++||+++.++++|++.. |+ .++++++.+|..+.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l--~~~v~~~~~D~~~~~~------------- 187 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGV--SDRFFVRKGEFLEPFK------------- 187 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTC--TTSEEEEESSTTGGGG-------------
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC--CCceEEEECcchhhcc-------------
Confidence 468999999999999999988 8899999999999999999886 44 4579999999876432
Q ss_pred ccccccccCCCCCCCCCCCCCCCce---eEEEEcCCCCCCCCCC-----CcCCCCCC----hHHHHHHHH-HccCcCcEE
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARV---DILIIDVDSPDSSSGM-----TCPAADFV----EGSFLLTVK-DALSEQGLF 673 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~y---D~Ii~D~~s~d~~~g~-----scPp~~f~----~~~fl~~~~-~~L~~~Gil 673 (759)
.+| |+|+.+.--......+ ..|...+. ..+|++.+. +.|+|||.|
T Consensus 188 ----------------------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l 245 (284)
T 1nv8_A 188 ----------------------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIV 245 (284)
T ss_dssp ----------------------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEE
T ss_pred ----------------------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEE
Confidence 247 9999963110000001 00111010 127999999 999999999
Q ss_pred EEEecCCChhHHHHHHHHHHHhcCceEEEeecCCccEEEEEec
Q 004354 674 IVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLS 716 (759)
Q Consensus 674 v~N~~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~ 716 (759)
++-+.... .+. +.+.|.....++--.+...++++..
T Consensus 246 ~~e~~~~q---~~~----v~~~~~~~~~~~D~~g~~R~~~~~~ 281 (284)
T 1nv8_A 246 LMEIGEDQ---VEE----LKKIVSDTVFLKDSAGKYRFLLLNR 281 (284)
T ss_dssp EEECCTTC---HHH----HTTTSTTCEEEECTTSSEEEEEEEC
T ss_pred EEEECchH---HHH----HHHHHHhCCeecccCCCceEEEEEE
Confidence 98653221 122 3334433222222234566776654
No 399
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.39 E-value=2.3e-06 Score=94.21 Aligned_cols=114 Identities=18% Similarity=0.218 Sum_probs=85.0
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 609 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~ 609 (759)
..+||.+|+|+|.++..+... ..+|++||+++.+++.|++.+....-++++++.+|+.+++.....
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~------------ 275 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK------------ 275 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH------------
T ss_pred CCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh------------
Confidence 368999999999999988887 459999999999999999997332223399999999999876531
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC-----ChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 610 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f-----~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
.+.+||+|++|...-..+ +... .-.+++..+.+.|+|||+|++-..+.
T Consensus 276 -----------------~~~~fD~Ii~dpP~~~~~------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 276 -----------------EGERFDLVVLDPPAFAKG------KKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp -----------------TTCCEEEEEECCCCSCCS------TTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -----------------cCCCeeEEEECCCCCCCC------hhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 135799999975321100 1111 12568899999999999998876443
No 400
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.38 E-value=8.7e-07 Score=92.63 Aligned_cols=103 Identities=15% Similarity=0.241 Sum_probs=79.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|+|.++..|.. +..+|++||+++.+++.|++.+ ++++++.+|+.++ .
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 113 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNF----R----------- 113 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTC----C-----------
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhC----C-----------
Confidence 3557999999999999988888 6679999999999999999986 4689999987542 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
....||+|+..- ....+ + --..+|+.+++.|+|||.|++......
T Consensus 114 -------------------~~~~fD~v~~~~----~l~~~--~----d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 114 -------------------VDKPLDAVFSNA----MLHWV--K----EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp -------------------CSSCEEEEEEES----CGGGC--S----CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -------------------cCCCcCEEEEcc----hhhhC--c----CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 025799999821 11111 1 125799999999999999998776543
No 401
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.38 E-value=1e-06 Score=93.83 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=81.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||+|.|.++..+...+ ..+|++||+++.+++.|++.+.- ...++++++.+|..++ .
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~---------- 153 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF----A---------- 153 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC----C----------
T ss_pred CCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC----C----------
Confidence 345799999999999998888775 45999999999999999998721 1246799999996442 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCCh
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQ 682 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~ 682 (759)
..||+|+..- ....+ |+. --..+|+.+.+.|+|||.+++..+....
T Consensus 154 ----------------------~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 ----------------------EPVDRIVSIE----AFEHF--GHE--NYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp ----------------------CCCSEEEEES----CGGGT--CGG--GHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred ----------------------CCcCEEEEeC----hHHhc--CHH--HHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 4699999731 10001 111 1267999999999999999988766543
No 402
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.38 E-value=3.7e-07 Score=96.00 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=83.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
..+.+||.||.|+|.++..+...+|. .+|++||++|.+++.|++.+.-. ..+++++++|+.++ .
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~----~---------- 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-PYDSEFLEGDATEI----E---------- 85 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-SSEEEEEESCTTTC----C----------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEcchhhc----C----------
Confidence 46689999999999999999999884 79999999999999999987432 23899999997653 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
. ..+||+|++...- ..+ + -...+|+.+++.|+|||.|++....
T Consensus 86 -------------------~-~~~fD~v~~~~~l----~~~---~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 -------------------L-NDKYDIAICHAFL----LHM---T---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp -------------------C-SSCEEEEEEESCG----GGC---S---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred -------------------c-CCCeeEEEECChh----hcC---C---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 0 2579999984311 111 1 1268999999999999999966533
No 403
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.38 E-value=2.1e-06 Score=92.29 Aligned_cols=101 Identities=17% Similarity=0.145 Sum_probs=79.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+.+.+|..+++++|+ |.+++.|++++ ++ .+|++++.+|..+ ...
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~---~~p-------- 233 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGL--SGRAQVVVGSFFD---PLP-------- 233 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS---CCC--------
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCc--CcCeEEecCCCCC---CCC--------
Confidence 3457999999999999999999999999999999 99999999987 44 5789999999641 111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..||+|++ ... -..+-+ ..+|+++++.|+|||.|++.-
T Consensus 234 ------------------------~~~D~v~~----~~v-------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 234 ------------------------AGAGGYVL----SAV-------LHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp ------------------------CSCSEEEE----ESC-------GGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred ------------------------CCCcEEEE----ehh-------hccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 26999998 111 112222 579999999999999888754
No 404
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.38 E-value=6.8e-07 Score=97.98 Aligned_cols=101 Identities=19% Similarity=0.238 Sum_probs=77.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
+.+.||.||.|+|.|++++.+.- ..+|.+||.++ +++.|++.. |+ +++++++.+|..++ .
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~s~-~~~~a~~~~~~n~~--~~~i~~i~~~~~~~----~--------- 145 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEASA-IWQQAREVVRFNGL--EDRVHVLPGPVETV----E--------- 145 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-THHHHHHHHHHTTC--TTTEEEEESCTTTC----C---------
T ss_pred CCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeChH-HHHHHHHHHHHcCC--CceEEEEeeeeeee----c---------
Confidence 34689999999999999998873 34899999997 789998876 55 67899999996553 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEE
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
-..+||+|+......- ....-.-.+++....+.|+|||+++
T Consensus 146 ---------------------lpe~~DvivsE~~~~~-------l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 146 ---------------------LPEQVDAIVSEWMGYG-------LLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ---------------------CSSCEEEEECCCCBTT-------BTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CCccccEEEeeccccc-------ccccchhhhHHHHHHhhCCCCceEC
Confidence 1267999998654321 1222234678888899999999887
No 405
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.37 E-value=1.9e-06 Score=90.86 Aligned_cols=73 Identities=12% Similarity=0.154 Sum_probs=59.9
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCe---EEEEeCCHHHHHHHHHHhccCCCCcEEEEeeccc
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG---ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTS 127 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~---VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~ 127 (759)
+.+...+...+.. .++.+|||||||+|.++..|++.+..+ |+|+|+|+.+++.++++. ..+++++++|+.+
T Consensus 28 ~~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~ 101 (279)
T 3uzu_A 28 HGVIDAIVAAIRP---ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALT 101 (279)
T ss_dssp HHHHHHHHHHHCC---CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGG
T ss_pred HHHHHHHHHhcCC---CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhc
Confidence 3455556666654 577899999999999999999885432 999999999999998883 4679999999998
Q ss_pred CC
Q 004354 128 MQ 129 (759)
Q Consensus 128 ~~ 129 (759)
++
T Consensus 102 ~~ 103 (279)
T 3uzu_A 102 FD 103 (279)
T ss_dssp CC
T ss_pred CC
Confidence 87
No 406
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.37 E-value=8.8e-07 Score=91.07 Aligned_cols=104 Identities=16% Similarity=0.138 Sum_probs=78.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|+|.++..|... ..++++||+++.+++.|++.+ -...++++++.+|+.++ .
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~----~----------- 99 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAI----P----------- 99 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSC----C-----------
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccC----C-----------
Confidence 45579999999999998888876 469999999999999999998 22357899999997532 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..+..||+|+... ....+ + --..+|+.+++.|+|||.+++..
T Consensus 100 ------------------~~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 100 ------------------LPDESVHGVIVVH----LWHLV---P---DWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp ------------------SCTTCEEEEEEES----CGGGC---T---THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeeEEEECC----chhhc---C---CHHHHHHHHHHHCCCCcEEEEEe
Confidence 1136799999821 11111 1 13679999999999999988873
No 407
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.36 E-value=1.7e-06 Score=89.37 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=77.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
+...+||.||+|.|.++..|.... .++++||+++.+++.|++.+. +++++.+|+.++ .
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~----~----------- 106 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDF----S----------- 106 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTC----C-----------
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHC----C-----------
Confidence 345799999999999999888874 489999999999999999864 689999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC----ChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF----VEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f----~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
....||+|++..+. -..+ --..+|+.+++.|+|||.|++..
T Consensus 107 -------------------~~~~fD~v~~~~~~----------l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 -------------------LGRRFSAVTCMFSS----------IGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp -------------------CSCCEEEEEECTTG----------GGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred -------------------ccCCcCEEEEcCch----------hhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 03679999983110 1112 12468999999999999999863
No 408
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.36 E-value=2.3e-06 Score=87.69 Aligned_cols=141 Identities=16% Similarity=0.215 Sum_probs=91.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHH----HHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTML----NLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATD 602 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~----~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~ 602 (759)
....+||.||.|+|.++..+.... |..+|.+||++|.++ +.|++. .++.++++|+...- ...
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------~nv~~i~~Da~~~~-~~~------ 141 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------PNIFPLLADARFPQ-SYK------ 141 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------TTEEEEECCTTCGG-GTT------
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------CCeEEEEcccccch-hhh------
Confidence 345799999999999999998875 567999999999774 455543 46999999976421 100
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCC-
Q 004354 603 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRS- 681 (759)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~- 681 (759)
.....||+|++|+-..+ ...-++..+++.|+|||.|++-+-.++
T Consensus 142 -----------------------~~~~~~D~I~~d~a~~~------------~~~il~~~~~~~LkpGG~lvisik~~~~ 186 (232)
T 3id6_C 142 -----------------------SVVENVDVLYVDIAQPD------------QTDIAIYNAKFFLKVNGDMLLVIKARSI 186 (232)
T ss_dssp -----------------------TTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEC----
T ss_pred -----------------------ccccceEEEEecCCChh------------HHHHHHHHHHHhCCCCeEEEEEEccCCc
Confidence 01257999999863211 112345566779999999998763332
Q ss_pred ------hhHHHHHHHHHHHh-cCceEEEeec--CCccEEEEEec
Q 004354 682 ------QATKDMVISRMKMV-FNHLFCLQLE--EDVNLVLFGLS 716 (759)
Q Consensus 682 ------~~~~~~v~~~l~~v-F~~v~~~~~~--~~~N~Vl~a~~ 716 (759)
.+..+.++..|++. |.-+-.+..+ +....+++|.+
T Consensus 187 d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 187 DVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp ---CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 22234566777654 6555444443 33556666653
No 409
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.36 E-value=1.5e-06 Score=88.25 Aligned_cols=104 Identities=19% Similarity=0.163 Sum_probs=79.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..+... +..++++||+++.+++.|++.+.- .+++++.+|+.+.. .
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~--~------------ 103 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH--L------------ 103 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC--C------------
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc--C------------
Confidence 34579999999999999888887 333999999999999999998753 47999999976531 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
....||+|+... ....+ + --..+|+.+++.|+|||.|++...
T Consensus 104 -------------------~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 104 -------------------PQDSFDLAYSSL----ALHYV---E---DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp -------------------CTTCEEEEEEES----CGGGC---S---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------CCCCceEEEEec----ccccc---c---hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 136799999832 11111 1 136899999999999999998763
No 410
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.35 E-value=1.8e-06 Score=90.34 Aligned_cols=108 Identities=14% Similarity=0.155 Sum_probs=80.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||+|.|.++..+....+. ++++||+++.+++.|++.+.- ...++++++.+|..++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~--------------- 126 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF--------------- 126 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---------------
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---------------
Confidence 44569999999999999888866554 999999999999999998621 1246899999997432
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
...||+|+..- ....+ ++. --..+|+.+++.|+|||.+++.....
T Consensus 127 ---------------------~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 ---------------------DEPVDRIVSIG----AFEHF--GHE--RYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp ---------------------CCCCSEEEEES----CGGGT--CTT--THHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred ---------------------CCCeeEEEEeC----chhhc--ChH--HHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 14699999721 10001 111 12689999999999999999876554
No 411
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.35 E-value=2.1e-06 Score=85.54 Aligned_cols=121 Identities=15% Similarity=0.114 Sum_probs=87.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..|... ..++++||+++.+++.|++.++ ++++.+|..+.-
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~------~~~~~~d~~~~~---------------- 98 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLG------RPVRTMLFHQLD---------------- 98 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHT------SCCEECCGGGCC----------------
T ss_pred CCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcC------CceEEeeeccCC----------------
Confidence 4579999999999999988877 4599999999999999999883 567778765431
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC---hHHHHHHHHHccCcCcEEEEEecCCChh--
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVNLVSRSQA-- 683 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~---~~~fl~~~~~~L~~~Gilv~N~~~~~~~-- 683 (759)
....||+|+.. .. -.++- -..+|+.+++.|+|||.|++.+......
T Consensus 99 ------------------~~~~fD~v~~~----~~-------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 149 (211)
T 3e23_A 99 ------------------AIDAYDAVWAH----AC-------LLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR 149 (211)
T ss_dssp ------------------CCSCEEEEEEC----SC-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE
T ss_pred ------------------CCCcEEEEEec----Cc-------hhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc
Confidence 13689999982 11 11111 2479999999999999999887554321
Q ss_pred ----------HHHHHHHHHHHh--cCceEEE
Q 004354 684 ----------TKDMVISRMKMV--FNHLFCL 702 (759)
Q Consensus 684 ----------~~~~v~~~l~~v--F~~v~~~ 702 (759)
..+.+.+.+++. |..+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 150 DKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp CTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred cccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 235566666665 7755443
No 412
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.34 E-value=1.3e-06 Score=98.35 Aligned_cols=134 Identities=17% Similarity=0.190 Sum_probs=95.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
...+||.+|.|.|..+..|...+++ .+|+++|+++..++.+++.+ |+ ++++++.+|+.++....
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~---~~v~~~~~D~~~~~~~~--------- 326 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI---KIVKPLVKDARKAPEII--------- 326 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCTTCCSSSS---------
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC---CcEEEEEcChhhcchhh---------
Confidence 4468999999999999999998876 79999999999999999886 55 46999999976541111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC--------------ChHHHHHHHHHccCcC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSEQ 670 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f--------------~~~~fl~~~~~~L~~~ 670 (759)
.+..||+|++|+-.+. .|+....+.. +...+|+.+.+.|+||
T Consensus 327 ----------------------~~~~fD~Vl~D~Pcsg--~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG 382 (450)
T 2yxl_A 327 ----------------------GEEVADKVLLDAPCTS--SGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPG 382 (450)
T ss_dssp ----------------------CSSCEEEEEEECCCCC--GGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEE
T ss_pred ----------------------ccCCCCEEEEcCCCCC--CeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1257999999985432 1221111111 1267899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhcCc
Q 004354 671 GLFIVNLVSRSQATKDMVISRMKMVFNH 698 (759)
Q Consensus 671 Gilv~N~~~~~~~~~~~v~~~l~~vF~~ 698 (759)
|.|++-..+......+.++..+.+-++.
T Consensus 383 G~lvy~tcs~~~~ene~~v~~~l~~~~~ 410 (450)
T 2yxl_A 383 GRLLYTTCSIFKEENEKNIRWFLNVHPE 410 (450)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCSS
T ss_pred cEEEEEeCCCChhhHHHHHHHHHHhCCC
Confidence 9999877666555445566665554443
No 413
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.34 E-value=1.1e-06 Score=95.42 Aligned_cols=104 Identities=18% Similarity=0.219 Sum_probs=78.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|.|.++.++... +..+|++||+++ +++.|++.. |+ .++++++.+|..++ ..
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~~~~--~~~v~~~~~d~~~~--~~---------- 129 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKANKL--DHVVTIIKGKVEEV--EL---------- 129 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTC--CC----------
T ss_pred CCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHHcCC--CCcEEEEECcHHHc--cC----------
Confidence 4579999999999999999988 666999999995 999999886 44 56799999997654 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
...+||+|+.+.-... + ...-.-..++..+.+.|+|||+++.+
T Consensus 130 ---------------------~~~~fD~Iis~~~~~~----l---~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 130 ---------------------PVEKVDIIISEWMGYC----L---FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ---------------------SSSCEEEEEECCCBBT----B---TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ---------------------CCCceEEEEEcccccc----c---cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 1368999999541110 0 11112367899999999999998743
No 414
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.34 E-value=7e-07 Score=90.72 Aligned_cols=106 Identities=14% Similarity=0.185 Sum_probs=79.0
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCC-CCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl-~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
+.+||.||+|.|.++..|.. +..+|++||+++.+++.|++.+.- ....+++++.+|+.++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------------- 128 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR---------------- 128 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC----------------
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC----------------
Confidence 35999999999999988865 456999999999999999999853 12467999999976531
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
....||+|+.-. ....+ |+. .-..+++.+++.|+|||.|++....
T Consensus 129 ------------------~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 129 ------------------PTELFDLIFDYV----FFCAI--EPE--MRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp ------------------CSSCEEEEEEES----STTTS--CGG--GHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------------------CCCCeeEEEECh----hhhcC--CHH--HHHHHHHHHHHHCCCCcEEEEEEec
Confidence 125799999721 11111 111 2367999999999999999876554
No 415
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.34 E-value=2.3e-06 Score=87.34 Aligned_cols=112 Identities=13% Similarity=0.205 Sum_probs=81.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|....+ +|++||+++.+++.|++.+. ..+++++.+|+.+.-.....
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~---------- 119 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQI---------- 119 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHH----------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc---ccCceEEECccccccccccc----------
Confidence 3457899999999999999998875 89999999999999999984 35899999998775332110
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
. ....||+|+...--.. + ++. --..+|+.+++.|+|||.|++--+..
T Consensus 120 ~------------------~~~~~d~v~~~~~~~~----~--~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~ 166 (245)
T 3ggd_A 120 H------------------SEIGDANIYMRTGFHH----I--PVE--KRELLGQSLRILLGKQGAMYLIELGT 166 (245)
T ss_dssp H------------------HHHCSCEEEEESSSTT----S--CGG--GHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred c------------------cccCccEEEEcchhhc----C--CHH--HHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 0 0134899998431110 1 111 12689999999999999766554443
No 416
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.32 E-value=1.1e-06 Score=88.05 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.||.|.|.++..+.... |..++++||+++.+++.|++.+ |+ ++++++.+|+.+.+..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~--------- 143 (215)
T 2yxe_A 76 KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY---DNVIVIVGDGTLGYEP--------- 143 (215)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC---TTEEEEESCGGGCCGG---------
T ss_pred CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC---CCeEEEECCcccCCCC---------
Confidence 345699999999999988888876 5579999999999999999986 44 4599999997432111
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
...||+|+++..-. ++. +.+.+.|+|||.+++.+...
T Consensus 144 ------------------------~~~fD~v~~~~~~~-----------~~~-----~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 144 ------------------------LAPYDRIYTTAAGP-----------KIP-----EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp ------------------------GCCEEEEEESSBBS-----------SCC-----HHHHHTEEEEEEEEEEESSS
T ss_pred ------------------------CCCeeEEEECCchH-----------HHH-----HHHHHHcCCCcEEEEEECCC
Confidence 25699999843111 111 48899999999999988654
No 417
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.32 E-value=9.8e-07 Score=89.08 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcC---C--CCCCCeEEEEccHHHHHHhhcccCcc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFG---F--TQDKSLKVHITDGIKFVREMKSSSAT 601 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fg---l--~~~~rl~v~i~Da~~~l~~~~~~~~~ 601 (759)
....+||.||.|.|.++..|...+ +..+|++||+++.+++.|++.+. + ...++++++.+|+.....
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-------- 147 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA-------- 147 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG--------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc--------
Confidence 345799999999999998888775 55699999999999999998762 1 013579999999763211
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 602 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
....||+|+++... .+ +++.+.+.|+|||.|++.+.+.
T Consensus 148 -------------------------~~~~fD~i~~~~~~-----------~~-----~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 148 -------------------------EEAPYDAIHVGAAA-----------PV-----VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp -------------------------GGCCEEEEEECSBB-----------SS-----CCHHHHHTEEEEEEEEEEESCT
T ss_pred -------------------------cCCCcCEEEECCch-----------HH-----HHHHHHHhcCCCcEEEEEEecC
Confidence 02569999985422 12 3468889999999999988554
No 418
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.32 E-value=1.2e-06 Score=96.63 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=83.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC-CcEEEEEcCHHHHHHHHhhcCCCC-CCC-eEEEEccHHHHHH-hhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPF-VGIEAVELDLTMLNLAEDYFGFTQ-DKS-LKVHITDGIKFVR-EMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~-~~i~~VEiDp~v~~vA~~~Fgl~~-~~r-l~v~i~Da~~~l~-~~~~~~~~~~~ 604 (759)
...+||.++.|.|.++..+....++ .+|++||+||..++.|++...+.. +++ ++++.+|+.++++ ...
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~-------- 123 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWG-------- 123 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCS--------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhC--------
Confidence 3468999999999999888877654 589999999999999999873321 345 9999999999987 542
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
.+||+|++|.+.. + .+|+..+.+.|++||+|++-.
T Consensus 124 ------------------------~~fD~V~lDP~g~--------~------~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 124 ------------------------FGFDYVDLDPFGT--------P------VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ------------------------SCEEEEEECCSSC--------C------HHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------------CCCcEEEECCCcC--------H------HHHHHHHHHHhCCCCEEEEEe
Confidence 5699999987321 1 569999999999999988754
No 419
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.32 E-value=2.2e-06 Score=92.28 Aligned_cols=102 Identities=20% Similarity=0.289 Sum_probs=76.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|+|.+++++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|+.++ .
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~----~--------- 100 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSS-IIEMAKELVELNGF--SDKITLLRGKLEDV----H--------- 100 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTS----C---------
T ss_pred CCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHH-HHHHHHHHHHHcCC--CCCEEEEECchhhc----c---------
Confidence 4579999999999999999887 556999999995 899999886 44 56899999997653 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEE
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
....+||+|+.+.... .+ ...-.-..++..+++.|+|||+++
T Consensus 101 --------------------~~~~~~D~Ivs~~~~~----~l---~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 101 --------------------LPFPKVDIIISEWMGY----FL---LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp --------------------CSSSCEEEEEECCCBT----TB---STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCCcccEEEEeCchh----hc---ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 0125799999863211 00 111122578999999999999997
No 420
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.32 E-value=1.3e-06 Score=82.24 Aligned_cols=85 Identities=13% Similarity=0.181 Sum_probs=65.2
Q ss_pred CCCeEEEECCCcc-hhHHHHHH-hCCCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC----CcccEEEeCCCC
Q 004354 68 PPPQILVPGCGNS-RLSEHLYD-AGFHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ----GGLDALMEPELG 141 (759)
Q Consensus 68 ~~~~ILDlGCG~G-~ls~~L~~-~G~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~----gtfD~Ii~~~~~ 141 (759)
++.+|||||||+| +.+..|++ .|+. |+++|+++.+++ +++.|+++.. ..||+|++....
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~~-V~atDInp~Av~--------------~v~dDiF~P~~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKVD-LVLTDIKPSHGG--------------IVRDDITSPRMEIYRGAALIYSIRPP 99 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCCE-EEEECSSCSSTT--------------EECCCSSSCCHHHHTTEEEEEEESCC
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCCe-EEEEECCccccc--------------eEEccCCCCcccccCCcCEEEEcCCC
Confidence 4579999999999 69999997 7885 999999996654 8899998866 589999887655
Q ss_pred hhHHHHHHHHHHHhcccCcEEEEEEcCch
Q 004354 142 HKLGNQYLSEVKRLLKSGGKFVCLTLAES 170 (759)
Q Consensus 142 ~~~~~~~l~ei~rvLkpGG~liiit~~~~ 170 (759)
.+....+++-..++ |.-+++..++.+
T Consensus 100 ~El~~~i~~lA~~v---~adliI~pL~~E 125 (153)
T 2k4m_A 100 AEIHSSLMRVADAV---GARLIIKPLTGE 125 (153)
T ss_dssp TTTHHHHHHHHHHH---TCEEEEECBTTB
T ss_pred HHHHHHHHHHHHHc---CCCEEEEcCCCC
Confidence 54444444443333 677888887654
No 421
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.32 E-value=3.7e-07 Score=96.55 Aligned_cols=106 Identities=16% Similarity=0.215 Sum_probs=81.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC---CCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ---DKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~---~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
.+.+||.||+|.|.++..|... ..+|++||+++.+++.|++.+.-.. ..+++++.+|+.++ .
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~----~--------- 146 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF----A--------- 146 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC----C---------
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC----C---------
Confidence 3459999999999998888877 4689999999999999999874311 16899999997653 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh----HHHHHHHHHccCcCcEEEEEecCCC
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE----GSFLLTVKDALSEQGLFIVNLVSRS 681 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~----~~fl~~~~~~L~~~Gilv~N~~~~~ 681 (759)
....||+|++... ..++++ ..+|+.+++.|+|||.|++.+....
T Consensus 147 ---------------------~~~~fD~v~~~~~-----------~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 147 ---------------------LDKRFGTVVISSG-----------SINELDEADRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp ---------------------CSCCEEEEEECHH-----------HHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred ---------------------cCCCcCEEEECCc-----------ccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 0367999986211 111222 6899999999999999999987654
No 422
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.32 E-value=6.5e-07 Score=91.10 Aligned_cols=107 Identities=19% Similarity=0.198 Sum_probs=76.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.||+|+|.++..|...+ |..+|++||++|.+++.+.+.... .++++++.+|+.+... ..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--~~~v~~~~~d~~~~~~-~~----------- 142 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--RTNIIPVIEDARHPHK-YR----------- 142 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--CTTEEEECSCTTCGGG-GG-----------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--cCCeEEEEcccCChhh-hc-----------
Confidence 45699999999999999998886 567999999998765544433321 1579999999876321 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
.....||+|++|+...+ ....++..+.+.|+|||.+++-+..
T Consensus 143 ------------------~~~~~~D~V~~~~~~~~------------~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 143 ------------------MLIAMVDVIFADVAQPD------------QTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ------------------GGCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ------------------ccCCcEEEEEEcCCCcc------------HHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 01257999999653111 1245688899999999999986543
No 423
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.32 E-value=1.9e-06 Score=93.38 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||.|+|.++.++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|+.++ ..
T Consensus 63 ~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--~~--------- 127 (340)
T 2fyt_A 63 FKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRLNKL--EDTITLIKGKIEEV--HL--------- 127 (340)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHHTTC--TTTEEEEESCTTTS--CC---------
T ss_pred cCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHHcCC--CCcEEEEEeeHHHh--cC---------
Confidence 45679999999999999999887 456999999997 899999886 44 46899999997654 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
...+||+|+.+.-.- .+ ...-.-..+|..+++.|+|||.++
T Consensus 128 ----------------------~~~~~D~Ivs~~~~~----~l---~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 128 ----------------------PVEKVDVIISEWMGY----FL---LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ----------------------SCSCEEEEEECCCBT----TB---TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------CCCcEEEEEEcCchh----hc---cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 136799999853110 00 011112568999999999999988
No 424
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.32 E-value=3.5e-06 Score=90.13 Aligned_cols=109 Identities=13% Similarity=0.100 Sum_probs=82.0
Q ss_pred HHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCC-CCcEEEEeecccCC---
Q 004354 56 PLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDR-SDMRWRVMDMTSMQ--- 129 (759)
Q Consensus 56 ~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~-~~i~f~~~D~~~~~--- 129 (759)
++..++.. .++.+|||+|||+|..+.+++.. +-..|+++|+++.+++.+++++...+ .+++++++|+.++.
T Consensus 93 l~~~~l~~---~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDP---PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCC---CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTC
T ss_pred HHHHHhCC---CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccc
Confidence 34445543 57889999999999999999875 33469999999999999998876544 57999999998764
Q ss_pred ---CcccEEEeCCC----C---h-----h--------------HHHHHHHHHHHhcccCcEEEEEEcC
Q 004354 130 ---GGLDALMEPEL----G---H-----K--------------LGNQYLSEVKRLLKSGGKFVCLTLA 168 (759)
Q Consensus 130 ---gtfD~Ii~~~~----~---~-----~--------------~~~~~l~ei~rvLkpGG~liiit~~ 168 (759)
+.||.|+++.. . . + ...+++..+.++|+ ||+++..|.+
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs 236 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCS 236 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCC
Confidence 47999997420 0 0 0 02356777878886 9999988765
No 425
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.32 E-value=8.9e-07 Score=97.44 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=83.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhc--------CCCCCCCeEEEEccHHHHHHhhccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF--------GFTQDKSLKVHITDGIKFVREMKSS 598 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~F--------gl~~~~rl~v~i~Da~~~l~~~~~~ 598 (759)
....+||.||.|+|.++..|...+ |..+|++||+++.+++.|++.+ |....++++++.+|+.+......
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~-- 159 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP-- 159 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS--
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc--
Confidence 356799999999999998888876 6789999999999999999986 41234689999999765421100
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 599 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
....+..||+|+...-- ..+ +. -..+|+.+++.|+|||.|++..
T Consensus 160 -------------------------~~~~~~~fD~V~~~~~l----~~~---~d---~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 160 -------------------------EGVPDSSVDIVISNCVC----NLS---TN---KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp -------------------------CCCCTTCEEEEEEESCG----GGC---SC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------------------------CCCCCCCEEEEEEccch----hcC---CC---HHHHHHHHHHHcCCCCEEEEEE
Confidence 00124689999984211 111 11 2689999999999999998864
No 426
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.31 E-value=1e-06 Score=86.44 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=76.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
.+.+||.||.|.|.++..+... ..++++||+++.+++.|++.+.-...++++++.+|..++ .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~----~------------ 93 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNL----T------------ 93 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGC----C------------
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhC----C------------
Confidence 4569999999999999988887 459999999999999999986221124699999997653 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
. ...||+|+... ....+ ++. .-..+++.+++.|+|||.+++-
T Consensus 94 -----------------~-~~~~D~v~~~~----~l~~~--~~~--~~~~~l~~~~~~L~~gG~l~~~ 135 (199)
T 2xvm_A 94 -----------------F-DRQYDFILSTV----VLMFL--EAK--TIPGLIANMQRCTKPGGYNLIV 135 (199)
T ss_dssp -----------------C-CCCEEEEEEES----CGGGS--CGG--GHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----------------C-CCCceEEEEcc----hhhhC--CHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 1 26799999732 10001 111 1267999999999999987653
No 427
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.31 E-value=9.7e-07 Score=87.95 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=77.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||.|.|.++..+ +..++++||+++.+++.|++.+ ++++++.+|+.+. .
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~------------ 90 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEAL----P------------ 90 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSC----C------------
T ss_pred CCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccC----C------------
Confidence 5579999999999988777 2238999999999999999987 4688888886442 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChh
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQA 683 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~ 683 (759)
..+.+||+|++.- ....+. --..+|+.+++.|+|||.+++....+...
T Consensus 91 -----------------~~~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 91 -----------------FPGESFDVVLLFT----TLEFVE------DVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp -----------------SCSSCEEEEEEES----CTTTCS------CHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred -----------------CCCCcEEEEEEcC----hhhhcC------CHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 1136799999831 111111 13689999999999999999988766543
No 428
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.31 E-value=4.5e-07 Score=91.95 Aligned_cols=102 Identities=18% Similarity=0.232 Sum_probs=77.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC------CCcEEEEEcCHHHHHHHHhhcCCCC-----CCCeEEEEccHHHHHHhhcc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP------FVGIEAVELDLTMLNLAEDYFGFTQ-----DKSLKVHITDGIKFVREMKS 597 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p------~~~i~~VEiDp~v~~vA~~~Fgl~~-----~~rl~v~i~Da~~~l~~~~~ 597 (759)
...+||.||.|.|.++..|....+ ..+|++||+++.+++.|++.+.-.. .++++++.+|+.+.+..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~--- 160 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP--- 160 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG---
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCc---
Confidence 346999999999999988887654 2599999999999999998863111 25799999998752111
Q ss_pred cCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 598 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
...||+|+++.... . +++.+.+.|+|||.+++.+
T Consensus 161 ------------------------------~~~fD~I~~~~~~~-----------~-----~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 161 ------------------------------NAPYNAIHVGAAAP-----------D-----TPTELINQLASGGRLIVPV 194 (227)
T ss_dssp ------------------------------GCSEEEEEECSCBS-----------S-----CCHHHHHTEEEEEEEEEEE
T ss_pred ------------------------------CCCccEEEECCchH-----------H-----HHHHHHHHhcCCCEEEEEE
Confidence 25799999854221 1 2378899999999999998
Q ss_pred cC
Q 004354 678 VS 679 (759)
Q Consensus 678 ~~ 679 (759)
..
T Consensus 195 ~~ 196 (227)
T 1r18_A 195 GP 196 (227)
T ss_dssp SC
T ss_pred ec
Confidence 65
No 429
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.31 E-value=3.3e-06 Score=93.23 Aligned_cols=106 Identities=12% Similarity=0.141 Sum_probs=78.9
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
..+||.+|+|+|..+..+... ...|++||+++.+++.|++.+ |+. .+++.+|+.+++....
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~V~avDis~~al~~a~~n~~~ng~~----~~~~~~D~~~~l~~~~---------- 278 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAYALAVDKDLEALGVLDQAALRLGLR----VDIRHGEALPTLRGLE---------- 278 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC----CEEEESCHHHHHHTCC----------
T ss_pred CCeEEEcccchhHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHhCCC----CcEEEccHHHHHHHhc----------
Confidence 579999999999999988876 345999999999999999987 542 2577999999987643
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC-----ChHHHHHHHHHccCcCcEEEEEecC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f-----~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
+. ||+|++|...-.. ..... .-.+++..+.+.|+|||+|++-..+
T Consensus 279 ---------------------~~-fD~Ii~dpP~f~~------~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 279 ---------------------GP-FHHVLLDPPTLVK------RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp ---------------------CC-EEEEEECCCCCCS------SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---------------------CC-CCEEEECCCcCCC------CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 24 9999997422100 01111 1247889999999999999854433
No 430
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.31 E-value=1.1e-06 Score=92.43 Aligned_cols=105 Identities=16% Similarity=0.251 Sum_probs=80.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..|...++ .++++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~--~~~~~~~~~d~~~~----~-------- 145 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGL--ADNITVKYGSFLEI----P-------- 145 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTC--TTTEEEEECCTTSC----S--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCC--CcceEEEEcCcccC----C--------
Confidence 4557999999999999988888753 59999999999999999886 54 46899999996542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
..+..||+|+.- .....+ |. -..+|+.+++.|+|||.|++...
T Consensus 146 ---------------------~~~~~fD~v~~~----~~l~~~--~~----~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 ---------------------CEDNSYDFIWSQ----DAFLHS--PD----KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp ---------------------SCTTCEEEEEEE----SCGGGC--SC----HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEeEEEec----chhhhc--CC----HHHHHHHHHHHcCCCeEEEEEEe
Confidence 113679999972 111111 11 37899999999999999887654
No 431
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.31 E-value=2.3e-06 Score=94.49 Aligned_cols=116 Identities=8% Similarity=0.111 Sum_probs=85.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~-~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.+|+|+|.++..+... +..+|++||+++.+++.|++.+.... +++++++.+|+.+++.....
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~---------- 285 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK---------- 285 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh----------
Confidence 4579999999999999988876 44599999999999999999883321 23899999999999876431
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC-----ChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-----VEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f-----~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
.+.+||+|++|...... ..... .-.+++..+.+.|+|||+|++-..+.
T Consensus 286 -------------------~~~~fD~Vi~dpP~~~~------~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 286 -------------------KGEKFDIVVLDPPAFVQ------HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp -------------------TTCCEEEEEECCCCSCS------SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred -------------------hCCCCCEEEECCCCCCC------CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 13579999997422100 01111 13568899999999999888765443
No 432
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.31 E-value=4e-06 Score=83.11 Aligned_cols=132 Identities=14% Similarity=0.099 Sum_probs=89.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHH-----HHhhcccCcccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKF-----VREMKSSSATDE 603 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~-----l~~~~~~~~~~~ 603 (759)
...+||.||.|.|.++.++.+. ..+|++||++|.. ..++++++.+|..+. +.+...
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~------ 85 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALR------ 85 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHH------
T ss_pred CCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhh------
Confidence 4579999999999999999887 5699999999851 235799999997542 111100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCC---CChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAAD---FVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~---f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
+....+||+|+.|.... ..|....... -+-...++.+.+.|+|||.|++-+...
T Consensus 86 ---------------------~~~~~~~D~Vlsd~~~~--~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 86 ---------------------EEGIEKVDDVVSDAMAK--VSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp ---------------------HHTCSSEEEEEECCCCC--CCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ---------------------cccCCcceEEecCCCcC--CCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 00013799999986321 1111000000 012467888899999999999988754
Q ss_pred ChhHHHHHHHHHHHhcCceEEEee
Q 004354 681 SQATKDMVISRMKMVFNHLFCLQL 704 (759)
Q Consensus 681 ~~~~~~~v~~~l~~vF~~v~~~~~ 704 (759)
.. ...++..++..|..|...+.
T Consensus 143 ~~--~~~~~~~l~~~F~~v~~~kP 164 (191)
T 3dou_A 143 DM--TNDFIAIWRKNFSSYKISKP 164 (191)
T ss_dssp TH--HHHHHHHHGGGEEEEEEECC
T ss_pred CC--HHHHHHHHHHhcCEEEEECC
Confidence 43 34678889999999888764
No 433
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.30 E-value=3.6e-06 Score=92.99 Aligned_cols=119 Identities=13% Similarity=0.088 Sum_probs=86.0
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC--CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ--DKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~--~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+||.+|+|+|.++..+.... ..+|++||+++..++.|++.+.... +++++++.+|+.+++.....
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~---------- 289 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD---------- 289 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH----------
T ss_pred CCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh----------
Confidence 4699999999999998888763 4599999999999999999884321 22799999999999876431
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCC-CCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSS-SGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~-~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
.+.+||+|++|.-....+ ..+ ....-.-.+++..+.+.|+|||++++-..+.
T Consensus 290 -------------------~~~~fD~Ii~dpP~~~~~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 290 -------------------RGEKFDVIVMDPPKFVENKSQL--MGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp -------------------TTCCEEEEEECCSSTTTCSSSS--SCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -------------------cCCCCCEEEECCCCCCCChhHH--HHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 125799999986321100 000 0000112578999999999999998866443
No 434
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.30 E-value=2.2e-06 Score=87.69 Aligned_cols=106 Identities=16% Similarity=0.127 Sum_probs=78.9
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|.... ..++++||+++.+++.|++.+.- .++++++.+|..++ .
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~----~----------- 153 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG--MPVGKFILASMETA----T----------- 153 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT--SSEEEEEESCGGGC----C-----------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc--CCceEEEEccHHHC----C-----------
Confidence 456799999999999998887765 45799999999999999999853 26799999997553 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
.....||+|++-- ....+ |+. --..+|+.+++.|+|||.|++-.
T Consensus 154 ------------------~~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 154 ------------------LPPNTYDLIVIQW----TAIYL--TDA--DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp ------------------CCSSCEEEEEEES----CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCCeEEEEEcc----hhhhC--CHH--HHHHHHHHHHHhcCCCeEEEEEe
Confidence 1135799999721 10000 000 12679999999999999888754
No 435
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.30 E-value=6.4e-07 Score=98.76 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=78.1
Q ss_pred CCCeEEEECCCcchhHHHHHHh--CCCeEEEEeCCHHHHHHHHHHhccCCC-C--cEEEEeecccC-----CCcccEEEe
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA--GFHGITNVDFSKVVISDMLRRNVRDRS-D--MRWRVMDMTSM-----QGGLDALME 137 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~--G~~~VtgIDiS~~~I~~a~~r~~~~~~-~--i~f~~~D~~~~-----~gtfD~Ii~ 137 (759)
++.+|||++||+|.++..++.. |...|+++|+++.+++.+++++...+- + ++++++|+.+. .+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4679999999999999999885 556799999999999999998865542 3 89999998543 257999999
Q ss_pred CCCChhHHHHHHHHHHHhcccCcEEEEEE
Q 004354 138 PELGHKLGNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 138 ~~~~~~~~~~~l~ei~rvLkpGG~liiit 166 (759)
+... ....++..+.+.|++||.+++..
T Consensus 132 DP~g--~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DPFG--TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CCSS--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCc--CHHHHHHHHHHHhCCCCEEEEEe
Confidence 8721 23568899999999999666554
No 436
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.30 E-value=1.3e-06 Score=95.01 Aligned_cols=104 Identities=21% Similarity=0.161 Sum_probs=76.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||.|.|.++.++.+. +..+|++||+++ +++.|++.+ |+ .++++++.+|..++ .
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~~~l--~~~v~~~~~d~~~~----~-------- 112 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEV----S-------- 112 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHHTTC--TTTEEEEESCTTTC----C--------
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHHcCC--CCcEEEEEcchhhC----C--------
Confidence 34579999999999999999886 556999999997 789998876 44 46899999996553 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
...+||+|+...... .+ .... -.+++..+++.|+|||+++++.
T Consensus 113 ----------------------~~~~~D~Ivs~~~~~----~~--~~~~--~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 113 ----------------------LPEQVDIIISEPMGY----ML--FNER--MLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp ----------------------CSSCEEEEEECCCBT----TB--TTTS--HHHHHHHGGGGEEEEEEEESCE
T ss_pred ----------------------CCCceeEEEEeCchh----cC--ChHH--HHHHHHHHHhhcCCCeEEEEec
Confidence 025799999842110 00 0111 2467788899999999998553
No 437
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.30 E-value=1.2e-06 Score=90.41 Aligned_cols=139 Identities=17% Similarity=0.138 Sum_probs=98.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|.|.++..|....|..+|++||+||..++.|++.. |+ .++++++.+|+.+.+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl--~~~I~v~~gD~l~~~~~----------- 87 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGL--TEQIDVRKGNGLAVIEK----------- 87 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTC--TTTEEEEECSGGGGCCG-----------
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC--CceEEEEecchhhccCc-----------
Confidence 346899999999999999999887779999999999999999986 65 56899999998876422
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
+.+||+|++ .|| -. -+-.++|....+.|+++|.||+.-....
T Consensus 88 ----------------------~~~~D~Ivi--------agm---Gg-~lI~~IL~~~~~~L~~~~~lIlq~~~~~---- 129 (244)
T 3gnl_A 88 ----------------------KDAIDTIVI--------AGM---GG-TLIRTILEEGAAKLAGVTKLILQPNIAA---- 129 (244)
T ss_dssp ----------------------GGCCCEEEE--------EEE---CH-HHHHHHHHHTGGGGTTCCEEEEEESSCH----
T ss_pred ----------------------cccccEEEE--------eCC---ch-HHHHHHHHHHHHHhCCCCEEEEEcCCCh----
Confidence 135999987 122 11 1236789999999999999998864322
Q ss_pred HHHHHHHHHh-cCceEEEeecC--CccEEEEEecCC
Q 004354 686 DMVISRMKMV-FNHLFCLQLEE--DVNLVLFGLSSE 718 (759)
Q Consensus 686 ~~v~~~l~~v-F~~v~~~~~~~--~~N~Vl~a~~~~ 718 (759)
..+...|.+. |.-+-..-+.+ -.=+|+.+.+..
T Consensus 130 ~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~~ 165 (244)
T 3gnl_A 130 WQLREWSEQNNWLITSEAILREDNKVYEIMVLAPSE 165 (244)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEECS
T ss_pred HHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeCC
Confidence 2344555544 54322222222 234566666553
No 438
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.30 E-value=1.6e-06 Score=91.09 Aligned_cols=115 Identities=13% Similarity=0.141 Sum_probs=81.7
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CC-CCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GF-TQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl-~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.||+|.|.++..|... ..+|++||+++.+++.|++.. +. ....++.++.+|+.+.-....
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------- 126 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP------- 126 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC-------
T ss_pred cCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc-------
Confidence 34579999999999999988887 349999999999999998764 11 122578899999887643321
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCC---CCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAA---DFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~---~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
...+||+|++-- ....-+ +.. .=.-..+|+.+.+.|+|||+|++....
T Consensus 127 -----------------------~~~~fD~V~~~g---~~l~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 127 -----------------------AGDGFDAVICLG---NSFAHL--PDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp -----------------------CTTCEEEEEECT---TCGGGS--CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -----------------------cCCCeEEEEEcC---hHHhhc--CccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 136799999820 110001 110 001367999999999999999988743
No 439
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.29 E-value=1.7e-06 Score=92.24 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=81.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..|...+ ..+|++||+++.+++.|++.+ |+ .++++++.+|+.+. .
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 180 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRI--DDHVRSRVCNMLDT----P-------- 180 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTSC----C--------
T ss_pred CCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCC--CCceEEEECChhcC----C--------
Confidence 456799999999999999888875 469999999999999999986 44 46899999997542 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
..+..||+|+.- +. +. .+--..+|+.+.+.|+|||.|++-...
T Consensus 181 ---------------------~~~~~fD~V~~~----~~---l~----~~~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 181 ---------------------FDKGAVTASWNN----ES---TM----YVDLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp ---------------------CCTTCEEEEEEE----SC---GG----GSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------------------CCCCCEeEEEEC----Cc---hh----hCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 113689999972 11 10 111588999999999999988876543
No 440
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.29 E-value=1.4e-06 Score=92.89 Aligned_cols=86 Identities=12% Similarity=0.088 Sum_probs=68.6
Q ss_pred hhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhC-CCeEEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 51 PQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAG-FHGITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 51 ~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G-~~~VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
+.+...+..++.. .++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.+++++...+.+++++++|+.+++
T Consensus 12 pvLl~e~l~~L~~---~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~ 88 (301)
T 1m6y_A 12 PVMVREVIEFLKP---EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREAD 88 (301)
T ss_dssp CTTHHHHHHHHCC---CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHH
T ss_pred HHHHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHH
Confidence 3455556666654 577899999999999999999873 346999999999999999987654468999999998764
Q ss_pred --------CcccEEEeCC
Q 004354 130 --------GGLDALMEPE 139 (759)
Q Consensus 130 --------gtfD~Ii~~~ 139 (759)
+.||.|+++.
T Consensus 89 ~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 89 FLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHHHTTCSCEEEEEEEC
T ss_pred HHHHhcCCCCCCEEEEcC
Confidence 3688888753
No 441
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.29 E-value=2.1e-06 Score=86.39 Aligned_cols=111 Identities=10% Similarity=0.144 Sum_probs=80.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-----CCCCeEEEEccHHHHHHhhcccCccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-----QDKSLKVHITDGIKFVREMKSSSATD 602 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-----~~~rl~v~i~Da~~~l~~~~~~~~~~ 602 (759)
+...+||.||+|.|.++..+... ..++++||+++.+++.|++.+.-. ...+++++.+|+.++ .
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~----~------ 96 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSL----S------ 96 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSC----C------
T ss_pred CCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccccc----C------
Confidence 35579999999999999988887 469999999999999999987421 124689999986542 1
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 603 EMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
.....||+|++.. ....+ +..-.-..+|+.+++.|+|||.+++....+
T Consensus 97 -----------------------~~~~~~D~v~~~~----~l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 97 -----------------------FHDSSFDFAVMQA----FLTSV---PDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp -----------------------SCTTCEEEEEEES----CGGGC---CCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -----------------------CCCCceeEEEEcc----hhhcC---CCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 1136799999831 10001 110111279999999999999999876554
No 442
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.29 E-value=9.6e-07 Score=90.02 Aligned_cols=103 Identities=17% Similarity=0.276 Sum_probs=76.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||.|.|.++..|....+ .+|++||+++.+++.|++.+....-++++++.+|+.. ...
T Consensus 90 ~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~----------- 154 (235)
T 1jg1_A 90 KPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---GFP----------- 154 (235)
T ss_dssp CTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CCG-----------
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc---CCC-----------
Confidence 3456999999999999999988877 7999999999999999998621111359999999721 111
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
....||+|+++..- ..+. ..+.+.|+|||.+++.+...
T Consensus 155 -------------------~~~~fD~Ii~~~~~-----------~~~~-----~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 155 -------------------PKAPYDVIIVTAGA-----------PKIP-----EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp -------------------GGCCEEEEEECSBB-----------SSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred -------------------CCCCccEEEECCcH-----------HHHH-----HHHHHhcCCCcEEEEEEecC
Confidence 02459999984311 1121 36788999999999988654
No 443
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.29 E-value=2.6e-06 Score=93.73 Aligned_cols=142 Identities=18% Similarity=0.144 Sum_probs=96.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.+|+|.|.++..+... ..+|++||+|+.+++.|++.+... .-.++++.+|+.+....
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~-~~~v~~~~~D~~~~~~~-------------- 295 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEAN-ALKAQALHSDVDEALTE-------------- 295 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHT-TCCCEEEECSTTTTSCT--------------
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHc-CCCeEEEEcchhhcccc--------------
Confidence 4569999999999999888887 459999999999999999987321 12389999997665211
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHHH
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 688 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 688 (759)
..+||+|+++.--. . +.. ...-.-..+++.+++.|+|||.+++-... ... .
T Consensus 296 -------------------~~~fD~Ii~npp~~--~-~~~--~~~~~~~~~l~~~~~~LkpGG~l~iv~n~-~l~----~ 346 (381)
T 3dmg_A 296 -------------------EARFDIIVTNPPFH--V-GGA--VILDVAQAFVNVAAARLRPGGVFFLVSNP-FLK----Y 346 (381)
T ss_dssp -------------------TCCEEEEEECCCCC--T-TCS--SCCHHHHHHHHHHHHHEEEEEEEEEEECT-TSC----H
T ss_pred -------------------CCCeEEEEECCchh--h-ccc--ccHHHHHHHHHHHHHhcCcCcEEEEEEcC-CCC----h
Confidence 26799999953110 0 000 00112357999999999999999876532 222 2
Q ss_pred HHHHHHhcCceEEEeecCCccEEEEEecCC
Q 004354 689 ISRMKMVFNHLFCLQLEEDVNLVLFGLSSE 718 (759)
Q Consensus 689 ~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~ 718 (759)
-..+.+.|..+-.+ .+..=.|+-+.+.+
T Consensus 347 ~~~l~~~f~~v~~l--~~~gF~Vl~a~~~~ 374 (381)
T 3dmg_A 347 EPLLEEKFGAFQTL--KVAEYKVLFAEKRG 374 (381)
T ss_dssp HHHHHHHHSCCEEE--EESSSEEEEEECC-
T ss_pred HHHHHHhhccEEEE--eCCCEEEEEEEEec
Confidence 45566788887776 33344555555443
No 444
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.28 E-value=4.3e-06 Score=81.01 Aligned_cols=134 Identities=11% Similarity=0.138 Sum_probs=86.9
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||.|+|.++..|.... +|++||+++.+++. .++++++.+|+.+.+.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~~--------------- 75 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---------HRGGNLVRADLLCSIN--------------- 75 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---------CSSSCEEECSTTTTBC---------------
T ss_pred CCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---------ccCCeEEECChhhhcc---------------
Confidence 44699999999999999998875 99999999999988 3578999999765311
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCC---CCCChHHHHHHHHHccCcCcEEEEEecCCChhHH
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPA---ADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATK 685 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp---~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~ 685 (759)
..+||+|+.+.-- .....++ ..--..+++..+.+.| |||.+++-..... ..
T Consensus 76 -------------------~~~fD~i~~n~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--~~ 129 (170)
T 3q87_B 76 -------------------QESVDVVVFNPPY----VPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--RP 129 (170)
T ss_dssp -------------------GGGCSEEEECCCC----BTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--CH
T ss_pred -------------------cCCCCEEEECCCC----ccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--CH
Confidence 2579999994310 0000000 0001246888888888 9999987654332 22
Q ss_pred HHHHHHHHHh-cCceEEEeecCCccEEEEEe
Q 004354 686 DMVISRMKMV-FNHLFCLQLEEDVNLVLFGL 715 (759)
Q Consensus 686 ~~v~~~l~~v-F~~v~~~~~~~~~N~Vl~a~ 715 (759)
+.+.+.+++. |..+...........++...
T Consensus 130 ~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 130 KEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp HHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred HHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 3455556554 65544444334444444443
No 445
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.28 E-value=2e-06 Score=94.44 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=78.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||.|.|.++.++... +..+|++||++ .+++.|++.+ |+ .++++++.+|+.++. .
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~~--~--------- 126 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKANNL--DHIVEVIEGSVEDIS--L--------- 126 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHHTTC--TTTEEEEESCGGGCC--C---------
T ss_pred CCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHHcCC--CCeEEEEECchhhcC--c---------
Confidence 45679999999999999999987 34499999999 9999999887 44 578999999986541 0
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~ 675 (759)
..+||+|+.+...-- ....-.-..++..+.+.|+|||+|++
T Consensus 127 -----------------------~~~~D~Iv~~~~~~~-------l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 127 -----------------------PEKVDVIISEWMGYF-------LLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp -----------------------SSCEEEEEECCCBTT-------BTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred -----------------------CCcceEEEEcChhhc-------ccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 157999999541110 11111236689999999999999974
No 446
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.28 E-value=2.1e-06 Score=93.06 Aligned_cols=140 Identities=14% Similarity=0.153 Sum_probs=93.7
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 609 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~ 609 (759)
..+||.||+|.|.+...+....|..+|++||+++.+++.|++.+.. .+...+++.+|+.++.
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~-~~~~~~~~~~d~~~~~----------------- 258 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA-NGVEGEVFASNVFSEV----------------- 258 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH-TTCCCEEEECSTTTTC-----------------
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH-hCCCCEEEEccccccc-----------------
Confidence 4689999999999999999998888999999999999999998732 1223678888876531
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHHHH
Q 004354 610 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVI 689 (759)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 689 (759)
..+||+|+.+. .-. .++. ...-....+++.+++.|+|||.|++-... ... .-
T Consensus 259 ------------------~~~fD~Iv~~~--~~~-~g~~--~~~~~~~~~l~~~~~~LkpgG~l~i~~~~-~~~----~~ 310 (343)
T 2pjd_A 259 ------------------KGRFDMIISNP--PFH-DGMQ--TSLDAAQTLIRGAVRHLNSGGELRIVANA-FLP----YP 310 (343)
T ss_dssp ------------------CSCEEEEEECC--CCC-SSSH--HHHHHHHHHHHHHGGGEEEEEEEEEEEET-TSS----HH
T ss_pred ------------------cCCeeEEEECC--Ccc-cCcc--CCHHHHHHHHHHHHHhCCCCcEEEEEEcC-CCC----cH
Confidence 25799999832 100 0000 00001367999999999999988864322 111 12
Q ss_pred HHHHHhcCceEEEeecCCccEEEEEec
Q 004354 690 SRMKMVFNHLFCLQLEEDVNLVLFGLS 716 (759)
Q Consensus 690 ~~l~~vF~~v~~~~~~~~~N~Vl~a~~ 716 (759)
..+...|..+..+. .+..-.|+-+.+
T Consensus 311 ~~l~~~f~~~~~~~-~~~gf~v~~~~k 336 (343)
T 2pjd_A 311 DVLDETFGFHEVIA-QTGRFKVYRAIM 336 (343)
T ss_dssp HHHHHHHSCCEEEE-ECSSEEEEEEEC
T ss_pred HHHHHhcCceEEEe-eCCCEEEEEEEe
Confidence 44566777765544 333444555544
No 447
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.27 E-value=2.9e-06 Score=94.83 Aligned_cols=133 Identities=16% Similarity=0.172 Sum_probs=95.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.+|.|.|..+..|...++..+|+++|+++..++.+++.+ |+ +++++.+|+.++.....
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~----~~~~~~~D~~~~~~~~~-------- 312 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM----KATVKQGDGRYPSQWCG-------- 312 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC----CCEEEECCTTCTHHHHT--------
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC----CeEEEeCchhhchhhcc--------
Confidence 3456999999999999999999988789999999999999999886 44 37899999877643322
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC--------------ChHHHHHHHHHccCcC
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--------------VEGSFLLTVKDALSEQ 670 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f--------------~~~~fl~~~~~~L~~~ 670 (759)
+..||+|++|+-.+. .|+....+.. +...+|+.+.+.|+||
T Consensus 313 -----------------------~~~fD~Vl~D~Pcsg--~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG 367 (429)
T 1sqg_A 313 -----------------------EQQFDRILLDAPCSA--TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG 367 (429)
T ss_dssp -----------------------TCCEEEEEEECCCCC--GGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred -----------------------cCCCCEEEEeCCCCc--ccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 257999999984432 1211111111 1258899999999999
Q ss_pred cEEEEEecCCChhHHHHHHHHHHHhcC
Q 004354 671 GLFIVNLVSRSQATKDMVISRMKMVFN 697 (759)
Q Consensus 671 Gilv~N~~~~~~~~~~~v~~~l~~vF~ 697 (759)
|.|++-..+......+.++..+-+.++
T Consensus 368 G~lvystcs~~~~ene~~v~~~l~~~~ 394 (429)
T 1sqg_A 368 GTLVYATCSVLPEENSLQIKAFLQRTA 394 (429)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHHHCT
T ss_pred CEEEEEECCCChhhHHHHHHHHHHhCC
Confidence 999987655544433445555444444
No 448
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.27 E-value=1.5e-06 Score=92.98 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=77.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCC-CCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMP-FVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p-~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||+|.|.++..+....+ ..+|++||+++.+++.|++.+....-++++++.+|+.+.+..
T Consensus 74 ~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~------------ 141 (317)
T 1dl5_A 74 DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPE------------ 141 (317)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGG------------
T ss_pred CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcccc------------
Confidence 3457999999999999998888766 367999999999999999987211113599999998764221
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
...||+|+++.--. ++. +.+.+.|+|||++++.+.+
T Consensus 142 ---------------------~~~fD~Iv~~~~~~-----------~~~-----~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 142 ---------------------FSPYDVIFVTVGVD-----------EVP-----ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ---------------------GCCEEEEEECSBBS-----------CCC-----HHHHHHEEEEEEEEEEBCB
T ss_pred ---------------------CCCeEEEEEcCCHH-----------HHH-----HHHHHhcCCCcEEEEEECC
Confidence 25699999953211 111 5778899999999998744
No 449
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.27 E-value=4.7e-06 Score=82.25 Aligned_cols=152 Identities=13% Similarity=0.080 Sum_probs=87.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCC--CCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMP--FVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p--~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
...+||.||.|.|.++..|...+| ..+|++||++|.. ..++++++.+|..+.....- ...+.
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~-----~~~~~ 85 (201)
T 2plw_A 22 KNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNI-----KNINY 85 (201)
T ss_dssp TTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC----------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhh-----ccccc
Confidence 346899999999999999999887 5799999999931 13568999998765310000 00000
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC----ChHHHHHHHHHccCcCcEEEEEecCCCh
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF----VEGSFLLTVKDALSEQGLFIVNLVSRSQ 682 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f----~~~~fl~~~~~~L~~~Gilv~N~~~~~~ 682 (759)
+...... ........ ......||+|+.|..-.. .|...+ ... ....+++.+.+.|+|||.|++.++....
T Consensus 86 i~~~~~~-~~~~~~~~--~~~~~~fD~v~~~~~~~~--~g~~~~-d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 86 IDNMNNN-SVDYKLKE--ILQDKKIDIILSDAAVPC--IGNKID-DHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp ------C-HHHHHHHH--HHTTCCEEEEEECCCCCC--CSCHHH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred cccccch-hhHHHHHh--hcCCCcccEEEeCCCcCC--CCCccc-CHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 0000000 00000000 001357999999652110 111000 000 0124788899999999999998765432
Q ss_pred hHHHHHHHHHHHhcCceEEEee
Q 004354 683 ATKDMVISRMKMVFNHLFCLQL 704 (759)
Q Consensus 683 ~~~~~v~~~l~~vF~~v~~~~~ 704 (759)
...+...+...|..+..++.
T Consensus 160 --~~~l~~~l~~~f~~v~~~~~ 179 (201)
T 2plw_A 160 --TNNLKTYLKGMFQLVHTTKP 179 (201)
T ss_dssp --HHHHHHHHHTTEEEEEECCC
T ss_pred --HHHHHHHHHHHHheEEEECC
Confidence 23567778888887766553
No 450
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.26 E-value=7.1e-06 Score=87.82 Aligned_cols=101 Identities=20% Similarity=0.301 Sum_probs=78.3
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+...+|..+++++|++ .+++.|++.+ |+ .++++++.+|..+. ..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~--~~--------- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGV--ASRYHTIAGSAFEV--DY--------- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTC--GGGEEEEESCTTTS--CC---------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCC--CcceEEEecccccC--CC---------
Confidence 45679999999999999999999999999999999 9999999986 44 45899999986542 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC---hHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~---~~~fl~~~~~~L~~~Gilv~N 676 (759)
...||+|++ ... ...+- -..+|+.+++.|+|||.+++.
T Consensus 230 -----------------------~~~~D~v~~----~~~-------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 270 (335)
T 2r3s_A 230 -----------------------GNDYDLVLL----PNF-------LHHFDVATCEQLLRKIKTALAVEGKVIVF 270 (335)
T ss_dssp -----------------------CSCEEEEEE----ESC-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------------CCCCcEEEE----cch-------hccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 134999998 110 11121 257999999999999966654
No 451
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.26 E-value=9e-06 Score=88.32 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=78.1
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+...+|..+++++|+ |.+++.|++.+ ++ .+|++++.+|..+. .
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~~----~-------- 253 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGV--ADRMRGIAVDIYKE----S-------- 253 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTC--TTTEEEEECCTTTS----C--------
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCC--CCCEEEEeCccccC----C--------
Confidence 4567999999999999999999999999999999 99999999887 44 46899999996543 1
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC---hHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~---~~~fl~~~~~~L~~~Gilv~N 676 (759)
-..+|+|++.- . -..+- -..+|+.+++.|+|||.|++.
T Consensus 254 -----------------------~~~~D~v~~~~----v-------lh~~~d~~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 254 -----------------------YPEADAVLFCR----I-------LYSANEQLSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp -----------------------CCCCSEEEEES----C-------GGGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred -----------------------CCCCCEEEEec----h-------hccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 12249998821 0 11122 267899999999999988654
No 452
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.25 E-value=1.9e-06 Score=93.25 Aligned_cols=103 Identities=10% Similarity=0.068 Sum_probs=79.1
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC-CCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-FTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg-l~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
..+||.||+|.|.+...+...+|..+++++|+ |.+++.|++++. ....+|++++.+|..+.-...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------------- 245 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE------------- 245 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-------------
Confidence 78999999999999999999999999999999 999999998862 112568999999965431001
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEE
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N 676 (759)
...||+|++ ... -..+-+ ..+|+.+++.|+|||.|++.
T Consensus 246 -------------------~~~~D~v~~----~~v-------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 246 -------------------GGAADVVML----NDC-------LHYFDAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp -------------------TCCEEEEEE----ESC-------GGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -------------------CCCccEEEE----ecc-------cccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 245999998 111 111222 57999999999999988765
No 453
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.25 E-value=4.6e-06 Score=90.70 Aligned_cols=125 Identities=14% Similarity=0.194 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhcccCCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEE
Q 004354 505 SYHMGIISGFTLISSYLESVASVGKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVH 584 (759)
Q Consensus 505 ~Y~~~m~~~l~l~~~~~~~~~~~~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~ 584 (759)
.|.++|..........+.....-....+||.||+|.|.+...|.+.+|..++++.|+ |.|++.|+++......+|++++
T Consensus 155 ~f~~aM~~~~~~~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~ 233 (353)
T 4a6d_A 155 QFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQ 233 (353)
T ss_dssp HHHHHHHTTHHHHHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeee
Confidence 466666533222222121112224557899999999999999999999999999998 9999999999866557899999
Q ss_pred EccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHH
Q 004354 585 ITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLL 661 (759)
Q Consensus 585 i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~ 661 (759)
.+|..+ . . ...+|+|++ ... -..+-+ ..+|+
T Consensus 234 ~gD~~~---~-~-------------------------------~~~~D~~~~----~~v-------lh~~~d~~~~~iL~ 267 (353)
T 4a6d_A 234 EGDFFK---D-P-------------------------------LPEADLYIL----ARV-------LHDWADGKCSHLLE 267 (353)
T ss_dssp ESCTTT---S-C-------------------------------CCCCSEEEE----ESS-------GGGSCHHHHHHHHH
T ss_pred cCcccc---C-C-------------------------------CCCceEEEe----eee-------cccCCHHHHHHHHH
Confidence 999532 1 1 245799887 110 011112 46899
Q ss_pred HHHHccCcCcEEEEE
Q 004354 662 TVKDALSEQGLFIVN 676 (759)
Q Consensus 662 ~~~~~L~~~Gilv~N 676 (759)
++++.|+|||.+++.
T Consensus 268 ~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 268 RIYHTCKPGGGILVI 282 (353)
T ss_dssp HHHHHCCTTCEEEEE
T ss_pred HHHhhCCCCCEEEEE
Confidence 999999999966553
No 454
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.25 E-value=1.6e-05 Score=91.29 Aligned_cols=164 Identities=11% Similarity=0.043 Sum_probs=112.5
Q ss_pred ccccchhhhHHHHHHhhcCC-CCCCCCeEEEECCCcchhHHHHHHh----CCCeEEEEeCCHHHHHHHHHHhccCC---C
Q 004354 45 EWYAEWPQLRDPLISLIGAP-TSSPPPQILVPGCGNSRLSEHLYDA----GFHGITNVDFSKVVISDMLRRNVRDR---S 116 (759)
Q Consensus 45 eW~~~~~~l~~~l~~~l~~~-~~~~~~~ILDlGCG~G~ls~~L~~~----G~~~VtgIDiS~~~I~~a~~r~~~~~---~ 116 (759)
+.|.+ ..+...+.+.+... .+.++.+|||.+||+|.+...+++. +...++|+|+++.++..|+.++.-.+ .
T Consensus 198 ~fyTP-~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~ 276 (542)
T 3lkd_A 198 EFYTP-QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIE 276 (542)
T ss_dssp SCCCC-HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred eeccc-HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcC
Confidence 44544 45666676766521 1246789999999999999888765 23469999999999998887654333 3
Q ss_pred CcEEEEeecccC--C----CcccEEEeCCCC--hh-----------------H------HHHHHHHHHHhcc-cCcEEEE
Q 004354 117 DMRWRVMDMTSM--Q----GGLDALMEPELG--HK-----------------L------GNQYLSEVKRLLK-SGGKFVC 164 (759)
Q Consensus 117 ~i~f~~~D~~~~--~----gtfD~Ii~~~~~--~~-----------------~------~~~~l~ei~rvLk-pGG~lii 164 (759)
++.+.++|.... + ..||+|++++.. .+ . --.++..+.+.|+ |||++.+
T Consensus 277 ~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~ 356 (542)
T 3lkd_A 277 NQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAI 356 (542)
T ss_dssp GEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEE
T ss_pred ccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEE
Confidence 578999998765 3 689999997411 00 0 1248899999999 9999988
Q ss_pred EEcCc--------hhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCC
Q 004354 165 LTLAE--------SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKEN 212 (759)
Q Consensus 165 it~~~--------~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~ 212 (759)
+.... ..+++.++.. ++...+..++..--.+.+.+..+++++|.+
T Consensus 357 VlP~g~Lf~~~~~~~iRk~Lle~---~~l~~II~LP~~lF~~t~i~t~Ilvl~K~k 409 (542)
T 3lkd_A 357 VLPHGVLFRGNAEGTIRKALLEE---GAIDTVIGLPANIFFNTSIPTTVIILKKNR 409 (542)
T ss_dssp EEETHHHHCCTHHHHHHHHHHHT---TCEEEEEECCSSCSSSCCCCEEEEEECSSC
T ss_pred EecchHhhCCchhHHHHHHHHhC---CceeEEEEccccccCCCCCcEEEEEEecCC
Confidence 87432 1234444433 455556666543223567889999999876
No 455
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.24 E-value=6.7e-07 Score=90.63 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=73.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..|... ..+|++||+++.+++.|++. .++++++.+|+.+.+.
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~--------------- 105 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP--------------- 105 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC---------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC---------------
Confidence 4579999999999999999887 46999999999999999998 2479999999653211
Q ss_pred ccccccCCCCCCCCCCCCC-CCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEE
Q 004354 609 GNEITSNNTRSCNGNCTAS-NARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~-~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
.. ...||+|+.. .+ + ..+|+.+.+.|+|||.|+
T Consensus 106 -----------------~~~~~~fD~v~~~---~~--------~-----~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 -----------------AGLGAPFGLIVSR---RG--------P-----TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp -----------------TTCCCCEEEEEEE---SC--------C-----SGGGGGHHHHEEEEEEEE
T ss_pred -----------------CcCCCCEEEEEeC---CC--------H-----HHHHHHHHHHcCCCcEEE
Confidence 11 3679999985 11 1 357789999999999998
No 456
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.24 E-value=5.9e-06 Score=81.07 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=86.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCC---------CcEEEEEcCHHHHHHHHhhcCCCCCCCeEEE-EccHHHHHH--hhc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPF---------VGIEAVELDLTMLNLAEDYFGFTQDKSLKVH-ITDGIKFVR--EMK 596 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~---------~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~-i~Da~~~l~--~~~ 596 (759)
...+||+||.|.|.++..|...++. .+|++||+++.. . .++++++ .+|....-. ...
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~---~~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P---LEGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C---CTTCEEECSCCTTSHHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c---CCCCeEEEeccCCCHHHHHHHH
Confidence 4579999999999999999998764 699999999941 1 2468888 888544311 100
Q ss_pred ccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh--------HHHHHHHHHccC
Q 004354 597 SSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE--------GSFLLTVKDALS 668 (759)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~--------~~fl~~~~~~L~ 668 (759)
. ...+.+||+|+.|.... . .+ ....+ ..+++.+.+.|+
T Consensus 91 ~---------------------------~~~~~~fD~V~~~~~~~-~-~~-----~~~~~~~~~~~~~~~~l~~~~~~Lk 136 (196)
T 2nyu_A 91 E---------------------------VLPGRRADVILSDMAPN-A-TG-----FRDLDHDRLISLCLTLLSVTPDILQ 136 (196)
T ss_dssp H---------------------------HSGGGCEEEEEECCCCC-C-CS-----CHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred H---------------------------hcCCCCCcEEEeCCCCC-C-CC-----CcccCHHHHHHHHHHHHHHHHHHhc
Confidence 0 00124799999975211 0 00 11111 378999999999
Q ss_pred cCcEEEEEecCCChhHHHHHHHHHHHhcCceEEEe
Q 004354 669 EQGLFIVNLVSRSQATKDMVISRMKMVFNHLFCLQ 703 (759)
Q Consensus 669 ~~Gilv~N~~~~~~~~~~~v~~~l~~vF~~v~~~~ 703 (759)
|||.|++..+.... ...+...++..|..+..++
T Consensus 137 pgG~lv~~~~~~~~--~~~~~~~l~~~f~~v~~~~ 169 (196)
T 2nyu_A 137 PGGTFLCKTWAGSQ--SRRLQRRLTEEFQNVRIIK 169 (196)
T ss_dssp EEEEEEEEECCSGG--GHHHHHHHHHHEEEEEEEC
T ss_pred CCCEEEEEecCCcc--HHHHHHHHHHHhcceEEEC
Confidence 99999998765432 2456777888898876665
No 457
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.24 E-value=9e-06 Score=93.46 Aligned_cols=162 Identities=9% Similarity=0.046 Sum_probs=108.5
Q ss_pred ccccchhhhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHh--------C--------CCeEEEEeCCHHHHHHHH
Q 004354 45 EWYAEWPQLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDA--------G--------FHGITNVDFSKVVISDML 108 (759)
Q Consensus 45 eW~~~~~~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~--------G--------~~~VtgIDiS~~~I~~a~ 108 (759)
+.|.+ ..+...+.+.+.. ...+|||.+||+|.+...+++. + -..++|+|+++.++..|+
T Consensus 226 ~fyTP-~~Vv~lmv~ll~p----~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 226 QYYTP-KSIVTLIVEMLEP----YKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp TTCCC-HHHHHHHHHHHCC----CSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred eEeCC-HHHHHHHHHHHhc----CCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 34443 5666777777754 2349999999999998776432 1 225999999999999988
Q ss_pred HHhccCCC--CcEEEEeecccCC----CcccEEEeCCCCh---h----------------------H------HHHHHHH
Q 004354 109 RRNVRDRS--DMRWRVMDMTSMQ----GGLDALMEPELGH---K----------------------L------GNQYLSE 151 (759)
Q Consensus 109 ~r~~~~~~--~i~f~~~D~~~~~----gtfD~Ii~~~~~~---~----------------------~------~~~~l~e 151 (759)
.++.-.+. ++.+.++|....+ ..||+|++++... + . --.++..
T Consensus 301 ~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~ 380 (544)
T 3khk_A 301 MNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLH 380 (544)
T ss_dssp HHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHH
T ss_pred HHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHH
Confidence 77643332 2334778866544 6899999975211 0 0 1268899
Q ss_pred HHHhcccCcEEEEEEcC-----c----hhhhhhhccccCCCceEEEEEeCCCCCCCCCceEEEEEEEeCCCc
Q 004354 152 VKRLLKSGGKFVCLTLA-----E----SHVLGLLFPKFRFGWKMSVHAIPQKSSSEPSLQTFMVVADKENSS 214 (759)
Q Consensus 152 i~rvLkpGG~liiit~~-----~----~~~~~~l~~~~~~~w~v~~~~~~~~~~~~~~~~~f~~v~~K~~~~ 214 (759)
+.+.|+|||++.++... . ..+++.++.. ++...+..++..--.+.+.+..+++++|.++.
T Consensus 381 ~l~~Lk~gGr~aiVlP~g~L~~~~~~~~~iRk~Lle~---~~l~aII~LP~~lF~~t~i~t~Ilvl~K~k~~ 449 (544)
T 3khk_A 381 MLYHLAPTGSMALLLANGSMSSNTNNEGEIRKTLVEQ---DLVECMVALPGQLFTNTQIPACIWFLTKDKNA 449 (544)
T ss_dssp HHHTEEEEEEEEEEEETHHHHCCGGGHHHHHHHHHHT---TCEEEEEECCTTBCCSCSSCEEEEEEESCCSS
T ss_pred HHHHhccCceEEEEecchhhhcCcchHHHHHHHHHhC---CcHhEEEECCCCCCCCCCCCeEEEEEecCCCc
Confidence 99999999999888632 1 1344444443 45555666654322356788999999997753
No 458
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.24 E-value=3.7e-06 Score=88.62 Aligned_cols=116 Identities=17% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCCeEEEEcccccHHHH----HHHHhCCCCcE--EEEEcCHHHHHHHHhhcCC-CCCCCe--EEEEccHHHHHHhhcccC
Q 004354 529 KSVKAVVIGLGAGLLPM----FLHECMPFVGI--EAVELDLTMLNLAEDYFGF-TQDKSL--KVHITDGIKFVREMKSSS 599 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~----~L~~~~p~~~i--~~VEiDp~v~~vA~~~Fgl-~~~~rl--~v~i~Da~~~l~~~~~~~ 599 (759)
.+.+||.||+|+|.++. .+...+|...| ++||+++.|++.|++.+.- ..-+++ .+..+|+.++......
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-- 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE-- 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT--
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc--
Confidence 45699999999996553 33344466655 9999999999999998631 111334 4556777665432110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 600 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
+..+.+||+|+. ......+.. -..+|+.+++.|+|||.|++-..+
T Consensus 130 -------------------------~~~~~~fD~V~~----~~~l~~~~d------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 130 -------------------------KKELQKWDFIHM----IQMLYYVKD------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp -------------------------TTCCCCEEEEEE----ESCGGGCSC------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -------------------------ccCCCceeEEEE----eeeeeecCC------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 001367999997 211111111 266999999999999999987655
Q ss_pred CC
Q 004354 680 RS 681 (759)
Q Consensus 680 ~~ 681 (759)
.+
T Consensus 175 ~~ 176 (292)
T 2aot_A 175 GS 176 (292)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 459
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.24 E-value=8.8e-06 Score=88.64 Aligned_cols=102 Identities=19% Similarity=0.192 Sum_probs=79.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..|...+|..+++++|+ |.+++.|++.+ |+ .++++++.+|..+ ...
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~---~~~-------- 246 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGL--ADRVTVAEGDFFK---PLP-------- 246 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTC--TTTEEEEECCTTS---CCS--------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC---cCC--------
Confidence 4567999999999999999999999899999999 99999999886 44 4589999999653 111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEec
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
..||+|++.- . -..+-+ ..+|+.+++.|+|||.|++.-.
T Consensus 247 ------------------------~~~D~v~~~~----v-------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 ------------------------VTADVVLLSF----V-------LLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ------------------------CCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ------------------------CCCCEEEEec----c-------ccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2499999821 0 111222 3799999999999998776543
No 460
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.24 E-value=2.2e-06 Score=89.77 Aligned_cols=104 Identities=11% Similarity=0.081 Sum_probs=77.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|.|.++..|... ..+|++||+++.+++.|++.+... .-+++++.+|+.++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~~--------------- 181 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKE-NLNISTALYDINAANI--------------- 181 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHT-TCCEEEEECCGGGCCC---------------
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHc-CCceEEEEeccccccc---------------
Confidence 5679999999999999998887 459999999999999999987321 1279999999765311
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..+||+|+... ...-+ +++ .-..+++.+++.|+|||.+++-.
T Consensus 182 -------------------~~~fD~i~~~~----~~~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 182 -------------------QENYDFIVSTV----VFMFL--NRE--RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -------------------CSCEEEEEECS----SGGGS--CGG--GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------------cCCccEEEEcc----chhhC--CHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 36799999832 10000 111 12579999999999999877643
No 461
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.23 E-value=1.9e-06 Score=85.14 Aligned_cols=103 Identities=16% Similarity=0.171 Sum_probs=77.0
Q ss_pred eEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccccc
Q 004354 532 KAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNE 611 (759)
Q Consensus 532 ~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~ 611 (759)
+||.||+|.|.++..|... ..++++||+++.+++.|++.+.- ...+++++.+|+.++ .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~--------------- 89 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQE-KGVKITTVQSNLADF----D--------------- 89 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHH-HTCCEEEECCBTTTB----S---------------
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHh-cCCceEEEEcChhhc----C---------------
Confidence 9999999999999888876 35999999999999999998721 112689998886543 1
Q ss_pred cccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 612 ITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
.....||+|+... .- + ++. .-..+|+.+++.|+|||.+++.....
T Consensus 90 --------------~~~~~fD~v~~~~-~~-----~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 --------------IVADAWEGIVSIF-CH-----L--PSS--LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp --------------CCTTTCSEEEEEC-CC-----C--CHH--HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred --------------CCcCCccEEEEEh-hc-----C--CHH--HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 0136799999721 10 0 111 13679999999999999999887543
No 462
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.22 E-value=3e-06 Score=85.68 Aligned_cols=100 Identities=20% Similarity=0.323 Sum_probs=77.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||+|.|.++..|.... .++++||+++.+++.|++.+.-. .+++++.+|+.+.+. .
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~--~----------- 131 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYY--NNIKLILGDGTLGYE--E----------- 131 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTC--SSEEEEESCGGGCCG--G-----------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhc--CCeEEEECCcccccc--c-----------
Confidence 345699999999999999998885 69999999999999999998532 289999999865211 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
...||+|+++..- .++. ..+.+.|+|||.+++.....
T Consensus 132 --------------------~~~fD~v~~~~~~-----------~~~~-----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 132 --------------------EKPYDRVVVWATA-----------PTLL-----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp --------------------GCCEEEEEESSBB-----------SSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred --------------------CCCccEEEECCcH-----------HHHH-----HHHHHHcCCCcEEEEEEcCC
Confidence 2579999985311 1122 46889999999999887544
No 463
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.22 E-value=4.9e-07 Score=93.12 Aligned_cols=46 Identities=22% Similarity=0.156 Sum_probs=40.6
Q ss_pred CCCeEEEEcccccHHHHHHHHh--CCCCcEEEEEcCHHHHHHHHhhcC
Q 004354 529 KSVKAVVIGLGAGLLPMFLHEC--MPFVGIEAVELDLTMLNLAEDYFG 574 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~--~p~~~i~~VEiDp~v~~vA~~~Fg 574 (759)
.+.+||.+|+|+|.++..+... .+..+|++||+|+.++++|++...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 4579999999999999988887 566799999999999999997763
No 464
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.21 E-value=6e-06 Score=87.19 Aligned_cols=99 Identities=19% Similarity=0.264 Sum_probs=81.6
Q ss_pred CCCeEEEECCCcchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHhc------cCCCCcEEEEeecccCC----CcccEEE
Q 004354 68 PPPQILVPGCGNSRLSEHLYDA-GFHGITNVDFSKVVISDMLRRNV------RDRSDMRWRVMDMTSMQ----GGLDALM 136 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~-G~~~VtgIDiS~~~I~~a~~r~~------~~~~~i~f~~~D~~~~~----gtfD~Ii 136 (759)
...+||-||.|.|..+..+++. +..+|+.+||++.+++.+++.+. -..++++++.+|....- ++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 5679999999999999999886 55789999999999999987652 23578999999998775 7899999
Q ss_pred eCCCCh-----hH-HHHHHHHHHHhcccCcEEEEEE
Q 004354 137 EPELGH-----KL-GNQYLSEVKRLLKSGGKFVCLT 166 (759)
Q Consensus 137 ~~~~~~-----~~-~~~~l~ei~rvLkpGG~liiit 166 (759)
...... .. -..+++.+++.|+|||+++.-+
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 854211 11 4679999999999999999864
No 465
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.21 E-value=1.4e-06 Score=87.48 Aligned_cols=110 Identities=13% Similarity=0.021 Sum_probs=74.8
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHH----HHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNL----AEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDE 603 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~v----A~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~ 603 (759)
....+||.||+|+|.++..|...+|..+|++||+++.+++. |++......-++++++.+|+.+. .
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l----~------- 94 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERL----P------- 94 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTC----C-------
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhC----C-------
Confidence 34578999999999999999999999999999999998875 33332111235799999997652 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCC-CCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 604 MSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSS-SGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~-~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..... |.|++.+...... .-+ + -...+|+.+++.|+|||.|++.+
T Consensus 95 ----------------------~~~~~-d~v~~~~~~~~~~~~~~--~----~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 ----------------------PLSGV-GELHVLMPWGSLLRGVL--G----SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp ----------------------SCCCE-EEEEEESCCHHHHHHHH--T----SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred ----------------------CCCCC-CEEEEEccchhhhhhhh--c----cHHHHHHHHHHHcCCCcEEEEEe
Confidence 01233 7666433110000 000 0 01679999999999999999854
No 466
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.21 E-value=3.3e-06 Score=90.66 Aligned_cols=97 Identities=20% Similarity=0.197 Sum_probs=77.1
Q ss_pred CeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 531 VKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 531 ~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
.+||.||+|.|.++..+...+|..+++++|+ |.+++.|++.+ |+ .++++++.+|..+ ..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~---~~------------ 230 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLA--GERVSLVGGDMLQ---EV------------ 230 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHH--TTSEEEEESCTTT---CC------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCC--CCcEEEecCCCCC---CC------------
Confidence 8999999999999999999999999999999 99999999986 33 4689999998644 11
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEE
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N 676 (759)
...||+|++-- . -..+-+ ..+|+.+++.|+|||.|++.
T Consensus 231 --------------------~~~~D~v~~~~----v-------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 231 --------------------PSNGDIYLLSR----I-------IGDLDEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp --------------------CSSCSEEEEES----C-------GGGCCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred --------------------CCCCCEEEEch----h-------ccCCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 14699999721 0 011111 37999999999999988776
No 467
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.21 E-value=6.9e-07 Score=94.05 Aligned_cols=98 Identities=11% Similarity=0.094 Sum_probs=78.5
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.+|.|.|.++..+... +..+|++||+||..++.|++.. |+ .++++++.+|+.++..
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v--~~~v~~~~~D~~~~~~----------- 189 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKV--EDRMSAYNMDNRDFPG----------- 189 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTC--TTTEEEECSCTTTCCC-----------
T ss_pred CCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCC--CCcEEEEeCcHHHhcc-----------
Confidence 34578999999999888777766 4568999999999999999987 54 5789999999987632
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
...||.||+|.. + ...+||..+.++|++||++.+-
T Consensus 190 -----------------------~~~~D~Vi~~~p-----------~---~~~~~l~~a~~~lk~gG~ih~~ 224 (278)
T 3k6r_A 190 -----------------------ENIADRILMGYV-----------V---RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp -----------------------CSCEEEEEECCC-----------S---SGGGGHHHHHHHEEEEEEEEEE
T ss_pred -----------------------ccCCCEEEECCC-----------C---cHHHHHHHHHHHcCCCCEEEEE
Confidence 257999998531 1 1357899999999999998764
No 468
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.21 E-value=1.5e-06 Score=88.16 Aligned_cols=106 Identities=18% Similarity=0.257 Sum_probs=78.0
Q ss_pred CCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccccc
Q 004354 530 SVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHG 609 (759)
Q Consensus 530 ~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~ 609 (759)
..+||.||+|.|.++..+... .++++||+++.+++.|++.+.- ...+++++.+|+.++ .
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~------------- 92 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAME-TNRHVDFWVQDMREL----E------------- 92 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHH-TTCCCEEEECCGGGC----C-------------
T ss_pred CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhh-cCCceEEEEcChhhc----C-------------
Confidence 479999999999998888776 6999999999999999998732 125799999996543 1
Q ss_pred cccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 610 NEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
....||+|++..+.-.. + +..---..+|+.+++.|+|||.+++.+..
T Consensus 93 -----------------~~~~fD~v~~~~~~~~~---~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 93 -----------------LPEPVDAITILCDSLNY---L---QTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp -----------------CSSCEEEEEECTTGGGG---C---CSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------------CCCCcCEEEEeCCchhh---c---CCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 02579999983211100 0 00001256899999999999999998754
No 469
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.20 E-value=1.7e-06 Score=86.66 Aligned_cols=103 Identities=15% Similarity=0.150 Sum_probs=76.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||.|.|.++..+... + .++++||+++.+++.|++.+. +++.+|+.++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~~~~-------------- 87 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKLD-------HVVLGDIETMDM-------------- 87 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTSS-------EEEESCTTTCCC--------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhCC-------cEEEcchhhcCC--------------
Confidence 35579999999999999988888 5 799999999999999998762 677787653210
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
...+..||+|++. .....+. -...+++.+++.|+|||.+++.....
T Consensus 88 -----------------~~~~~~fD~v~~~----~~l~~~~------~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 88 -----------------PYEEEQFDCVIFG----DVLEHLF------DPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp -----------------CSCTTCEEEEEEE----SCGGGSS------CHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred -----------------CCCCCccCEEEEC----ChhhhcC------CHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 0123679999972 1111111 12689999999999999999887543
No 470
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.20 E-value=1.6e-06 Score=95.90 Aligned_cols=101 Identities=8% Similarity=-0.150 Sum_probs=74.0
Q ss_pred CCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCHHHHHHHHHHhccC---CCCcEEEEeecccC-C----CcccEEEeCC
Q 004354 68 PPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRD---RSDMRWRVMDMTSM-Q----GGLDALMEPE 139 (759)
Q Consensus 68 ~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~~~I~~a~~r~~~~---~~~i~f~~~D~~~~-~----gtfD~Ii~~~ 139 (759)
++.+|||+|||+|..+..|+..+. +|+++|+|+.+++.+++++... ..+++|+++|+.+. + +.||+|+++.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 468999999999999999988765 6999999999999998887543 25799999999885 2 5899999975
Q ss_pred CCh----------hHHHHHHHHHHHhcccCcEEEEEEcCc
Q 004354 140 LGH----------KLGNQYLSEVKRLLKSGGKFVCLTLAE 169 (759)
Q Consensus 140 ~~~----------~~~~~~l~ei~rvLkpGG~liiit~~~ 169 (759)
... .....-+..+.+.|...+..+++.+++
T Consensus 172 Prr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP 211 (410)
T 3ll7_A 172 ARRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSP 211 (410)
T ss_dssp EEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECT
T ss_pred CCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCC
Confidence 211 111223455566555545555566554
No 471
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.20 E-value=1.4e-06 Score=89.18 Aligned_cols=108 Identities=15% Similarity=0.170 Sum_probs=79.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+.+||.||+|+|.++..|... ..++++||+++.+++.|++.+.- ...+++++.+|..++ .
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~----~----------- 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKE-RNLKIEFLQGDVLEI----A----------- 101 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-TTCCCEEEESCGGGC----C-----------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh-cCCceEEEECChhhc----c-----------
Confidence 34579999999999999888876 45999999999999999988732 123699999997653 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
...+||+|++....... + ++. .-..+|+.+++.|+|||+|++.+.+
T Consensus 102 -------------------~~~~fD~v~~~~~~~~~---~--~~~--~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 102 -------------------FKNEFDAVTMFFSTIMY---F--DEE--DLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp -------------------CCSCEEEEEECSSGGGG---S--CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------------cCCCccEEEEcCCchhc---C--CHH--HHHHHHHHHHHHcCCCeEEEEeccc
Confidence 02569999973211100 0 000 1257899999999999999988753
No 472
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.19 E-value=2.1e-06 Score=93.70 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=78.6
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
..+.+||.||+|.|.++..|.+.+|..+++++|+ |.+++.|++.+.-. ..+|++++.+|..+. +..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~---------- 244 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDR--DVP---------- 244 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSS--SCC----------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccccc--CCC----------
Confidence 3568999999999999999999999999999999 99999999987421 246899999995431 000
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEE
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N 676 (759)
. ...||+|++ ... -..+-+ ..+|+.+++.|+|||.|++.
T Consensus 245 -------------------~-p~~~D~v~~----~~v-------lh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 245 -------------------F-PTGFDAVWM----SQF-------LDCFSEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp -------------------C-CCCCSEEEE----ESC-------STTSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred -------------------C-CCCcCEEEE----ech-------hhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 0 146999997 111 011112 46899999999999988764
No 473
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.19 E-value=2.3e-06 Score=92.48 Aligned_cols=112 Identities=13% Similarity=0.188 Sum_probs=85.3
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCC-CCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQ-DKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~-~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.+|+|.|.++.. .. +..+|++||++|.+++.|++.+.... +++++++.+|+.+++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--------------- 256 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--------------- 256 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------------
T ss_pred CCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------------
Confidence 447999999999999887 55 46699999999999999999873221 358999999988764
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHH
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDM 687 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~ 687 (759)
.+||+|++|. |. + ..+++..+.+.|+|||++++...... ...
T Consensus 257 ---------------------~~fD~Vi~dp------------P~-~-~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~ 298 (336)
T 2yx1_A 257 ---------------------VKGNRVIMNL------------PK-F-AHKFIDKALDIVEEGGVIHYYTIGKD---FDK 298 (336)
T ss_dssp ---------------------CCEEEEEECC------------TT-T-GGGGHHHHHHHEEEEEEEEEEEEESS---SHH
T ss_pred ---------------------CCCcEEEECC------------cH-h-HHHHHHHHHHHcCCCCEEEEEEeecC---chH
Confidence 2599999953 11 1 13799999999999998888655554 234
Q ss_pred HHHHHHHhc
Q 004354 688 VISRMKMVF 696 (759)
Q Consensus 688 v~~~l~~vF 696 (759)
+.+.+.+.+
T Consensus 299 ~~~~l~~~~ 307 (336)
T 2yx1_A 299 AIKLFEKKC 307 (336)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHhc
Confidence 566666664
No 474
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.18 E-value=2.8e-06 Score=89.03 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=80.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||+|.|.+...+... +..++++||+++.+++.|++.+.-. ...+++++.+|+.+. ...
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~---------- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGR--HMD---------- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTS--CCC----------
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccc--ccC----------
Confidence 35579999999999877777776 4569999999999999999987321 235799999997653 000
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC-ChHHHHHHHHHccCcCcEEEEEecC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-VEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f-~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
....||+|++..- +.....+. --..+|+.+++.|+|||.|++....
T Consensus 130 --------------------~~~~fD~v~~~~~-------l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 130 --------------------LGKEFDVISSQFS-------FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp --------------------CSSCEEEEEEESC-------GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred --------------------CCCCcCEEEECch-------hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 1367999998420 10000000 1267999999999999999988754
No 475
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.17 E-value=1.3e-06 Score=86.71 Aligned_cols=109 Identities=16% Similarity=0.107 Sum_probs=76.5
Q ss_pred CCCCeEEEEcccccHH-HHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLL-PMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l-~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
....+||.||.|+|.+ ..++.. +..++++||+++.+++.|++.+.- ...+++++.+|+.+. .
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~d~~~~----~---------- 84 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRE-NNFKLNISKGDIRKL----P---------- 84 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHH-HTCCCCEEECCTTSC----C----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHh-cCCceEEEECchhhC----C----------
Confidence 3457999999999976 344433 356999999999999999988632 124688999987542 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
.....||+|+.. .....+ |+. --..+++.+++.|+|||.+++...+.
T Consensus 85 -------------------~~~~~fD~v~~~----~~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 -------------------FKDESMSFVYSY----GTIFHM--RKN--DVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp -------------------SCTTCEEEEEEC----SCGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred -------------------CCCCceeEEEEc----ChHHhC--CHH--HHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 113679999972 111111 101 13678999999999999999887654
No 476
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.15 E-value=4e-06 Score=86.91 Aligned_cols=98 Identities=12% Similarity=0.192 Sum_probs=77.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||+||.|+|.++..+...+|..++++||+++.+++.|++.+ +++.++.+|+.+. .
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~----~----------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRL----P----------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSC----S-----------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhC----C-----------
Confidence 3457999999999999999998888789999999999999999885 4578898886432 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
..+..||+|+.- +. ..+++.+.+.|+|||.|++.....
T Consensus 144 ------------------~~~~~fD~v~~~-~~----------------~~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 144 ------------------FSDTSMDAIIRI-YA----------------PCKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ------------------BCTTCEEEEEEE-SC----------------CCCHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------------CCCCceeEEEEe-CC----------------hhhHHHHHHhcCCCcEEEEEEcCH
Confidence 013579999961 11 125899999999999999876544
No 477
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.15 E-value=7.3e-07 Score=90.96 Aligned_cols=103 Identities=15% Similarity=0.144 Sum_probs=76.4
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
...+||.+|+|.|.++..+.... .+|++||+++.+++.|++.+... ..++++++.+|+.++. .
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~----------- 141 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA---S----------- 141 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG---G-----------
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc---c-----------
Confidence 56799999999999999998863 79999999999999999887221 1358999999998875 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
...||+|++|.-- .+...+. ..+..+++.|+|||++++..
T Consensus 142 --------------------~~~~D~v~~~~~~----~~~~~~~------~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 --------------------FLKADVVFLSPPW----GGPDYAT------AETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp --------------------GCCCSEEEECCCC----SSGGGGG------SSSBCTTTSCSSCHHHHHHH
T ss_pred --------------------cCCCCEEEECCCc----CCcchhh------hHHHHHHhhcCCcceeHHHH
Confidence 2579999985311 1111111 14456788899999877553
No 478
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.15 E-value=1.3e-06 Score=90.92 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=59.1
Q ss_pred CCCCeEEEECCCcchhHHHHHHhCCCeEEEEeCCH-------HHHHHHHHHhccCC--CCcEEEEeecccC-C------C
Q 004354 67 SPPPQILVPGCGNSRLSEHLYDAGFHGITNVDFSK-------VVISDMLRRNVRDR--SDMRWRVMDMTSM-Q------G 130 (759)
Q Consensus 67 ~~~~~ILDlGCG~G~ls~~L~~~G~~~VtgIDiS~-------~~I~~a~~r~~~~~--~~i~f~~~D~~~~-~------g 130 (759)
.++.+|||+|||+|.++..++..|. +|+++|+|+ .+++.++++..... .+++++++|+.++ + +
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred CCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 3567999999999999999999876 499999999 88988876543221 3499999998774 2 5
Q ss_pred cccEEEeCCC
Q 004354 131 GLDALMEPEL 140 (759)
Q Consensus 131 tfD~Ii~~~~ 140 (759)
+||+|+++..
T Consensus 161 ~fD~V~~dP~ 170 (258)
T 2r6z_A 161 KPDIVYLDPM 170 (258)
T ss_dssp CCSEEEECCC
T ss_pred CccEEEECCC
Confidence 7999999763
No 479
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.15 E-value=5.6e-06 Score=89.82 Aligned_cols=101 Identities=17% Similarity=0.298 Sum_probs=78.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
....+||.||+|.|.++..+...+|..+++++|+ |.+++.|++.+ |+ .++++++.+|..+ ...
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~---~~~-------- 247 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGL--SDRVDVVEGDFFE---PLP-------- 247 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTC--TTTEEEEECCTTS---CCS--------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCC--CCceEEEeCCCCC---CCC--------
Confidence 4567999999999999999999999889999999 99999999886 43 4589999999653 111
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVE---GSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~---~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..||+|++.- . -.++-+ ..+|+.+++.|+|||.|++.-
T Consensus 248 ------------------------~~~D~v~~~~----v-------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 248 ------------------------RKADAIILSF----V-------LLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp ------------------------SCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ------------------------CCccEEEEcc----c-------ccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2499998721 0 111222 379999999999999777653
No 480
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.14 E-value=5.5e-06 Score=92.38 Aligned_cols=105 Identities=11% Similarity=0.045 Sum_probs=77.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHH-------Hhhc---CCCCCCCeEEEEccHHH---HHHh
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLA-------EDYF---GFTQDKSLKVHITDGIK---FVRE 594 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA-------~~~F---gl~~~~rl~v~i~Da~~---~l~~ 594 (759)
....+||.||+|.|.++..|....+..+|++||+++.+++.| ++.+ |+. -.+++++.+|+.. .+..
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTCHHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCcccccccccc
Confidence 455799999999999999999877777899999999999999 7664 531 2579999987652 1211
Q ss_pred hcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEE
Q 004354 595 MKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFI 674 (759)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv 674 (759)
.. ..||+|++...- . .+. -..+|..+.+.|+|||.|+
T Consensus 320 ~~--------------------------------~~FDvIvvn~~l------~---~~d--~~~~L~el~r~LKpGG~lV 356 (433)
T 1u2z_A 320 LI--------------------------------PQCDVILVNNFL------F---DED--LNKKVEKILQTAKVGCKII 356 (433)
T ss_dssp HG--------------------------------GGCSEEEECCTT------C---CHH--HHHHHHHHHTTCCTTCEEE
T ss_pred cc--------------------------------CCCCEEEEeCcc------c---ccc--HHHHHHHHHHhCCCCeEEE
Confidence 11 469999973111 0 011 2457889999999999888
Q ss_pred EE
Q 004354 675 VN 676 (759)
Q Consensus 675 ~N 676 (759)
+-
T Consensus 357 i~ 358 (433)
T 1u2z_A 357 SL 358 (433)
T ss_dssp ES
T ss_pred Ee
Confidence 64
No 481
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.14 E-value=2.6e-06 Score=86.43 Aligned_cols=108 Identities=23% Similarity=0.246 Sum_probs=78.8
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|+|.++..+... ..++++||+++.+++.|++.+.-. ..+++++.+|..++ .
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~----~------------ 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDISNL----N------------ 97 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCGGGC----C------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhc-CCCeEEEecccccC----C------------
Confidence 5679999999999998888877 358999999999999999987321 22789999987543 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
. ...||+|++..+. ...+ +..---..+|+.+++.|+|||.|++.+..
T Consensus 98 -----------------~-~~~fD~v~~~~~~---l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 98 -----------------I-NRKFDLITCCLDS---TNYI---IDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp -----------------C-SCCEEEEEECTTG---GGGC---CSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred -----------------c-cCCceEEEEcCcc---cccc---CCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 0 1579999983211 0001 00001367999999999999999997753
No 482
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.13 E-value=6e-05 Score=74.66 Aligned_cols=116 Identities=19% Similarity=0.245 Sum_probs=81.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.+|.|.|.++..+... +..++++||+|+.+++.|++.+....- +++++.+|+.++ .
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~----~------------ 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF----N------------ 110 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC----C------------
T ss_pred CcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc----C------------
Confidence 4579999999999999988877 334899999999999999998743111 799999997763 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCCChhHHHHH
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMV 688 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 688 (759)
..||+|++|.--... ..-....+++.+.+.| +|++++.+. .......+
T Consensus 111 --------------------~~~D~v~~~~p~~~~--------~~~~~~~~l~~~~~~l--~~~~~~~~~--~~~~~~~~ 158 (207)
T 1wy7_A 111 --------------------SRVDIVIMNPPFGSQ--------RKHADRPFLLKAFEIS--DVVYSIHLA--KPEVRRFI 158 (207)
T ss_dssp --------------------CCCSEEEECCCCSSS--------STTTTHHHHHHHHHHC--SEEEEEEEC--CHHHHHHH
T ss_pred --------------------CCCCEEEEcCCCccc--------cCCchHHHHHHHHHhc--CcEEEEEeC--CcCCHHHH
Confidence 369999996521110 1123468899999988 677765532 23333444
Q ss_pred HHHHHH
Q 004354 689 ISRMKM 694 (759)
Q Consensus 689 ~~~l~~ 694 (759)
...+.+
T Consensus 159 ~~~l~~ 164 (207)
T 1wy7_A 159 EKFSWE 164 (207)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444544
No 483
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.12 E-value=8.7e-06 Score=88.42 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=82.0
Q ss_pred CCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
...+||.+|+|.|.++..+.... |..+|+++|+||.+++.|++.+ |+ + +++++.+|+.++...
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~--~-~i~~~~~D~~~~~~~---------- 269 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL--S-WIRFLRADARHLPRF---------- 269 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC--T-TCEEEECCGGGGGGT----------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC--C-ceEEEeCChhhCccc----------
Confidence 45689999999999999988877 7789999999999999999987 55 3 799999998875221
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC--ChHHHHHHHHHccCcCcEEEEEe
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF--VEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f--~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
...||+|+.|.--+... .+...+ +-..+++.+++.|+|||.+++-.
T Consensus 270 -----------------------~~~~D~Ii~npPyg~r~----~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 270 -----------------------FPEVDRILANPPHGLRL----GRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp -----------------------CCCCSEEEECCCSCC--------CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred -----------------------cCCCCEEEECCCCcCcc----CCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 24589999965221100 001111 12679999999999999998754
No 484
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.12 E-value=8.5e-06 Score=89.64 Aligned_cols=106 Identities=13% Similarity=0.115 Sum_probs=77.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHh----------hcCCCCCCCeEEEEccHHHHHHhhcc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAED----------YFGFTQDKSLKVHITDGIKFVREMKS 597 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~----------~Fgl~~~~rl~v~i~Da~~~l~~~~~ 597 (759)
....+||.||+|+|.++..+....+..++++||+++.++++|++ .+|+. .++++++.+|..+.--...
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~d~- 249 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWRER- 249 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHHHH-
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCccccc-
Confidence 44578999999999999988887776579999999999999986 34652 3589999999876421110
Q ss_pred cCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 598 SSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
-..+|+|++- +. . . .+. -...|..+.+.|+|||.||+.
T Consensus 250 ------------------------------~~~aDVVf~N--n~-~---F---~pd--l~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 250 ------------------------------IANTSVIFVN--NF-A---F---GPE--VDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ------------------------------HHTCSEEEEC--CT-T---C---CHH--HHHHHHHHHTTSCTTCEEEES
T ss_pred ------------------------------cCCccEEEEc--cc-c---c---Cch--HHHHHHHHHHcCCCCcEEEEe
Confidence 0358999982 11 0 0 111 245677888999999999875
No 485
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.10 E-value=6e-06 Score=85.68 Aligned_cols=71 Identities=13% Similarity=0.168 Sum_probs=56.2
Q ss_pred hhHHHHHHhhcCCCCCCCCeEEEECCCcchhHHHHHHhCCCe--EEEEeCCHHHHHHHHHHhccCCCCcEEEEeecccCC
Q 004354 52 QLRDPLISLIGAPTSSPPPQILVPGCGNSRLSEHLYDAGFHG--ITNVDFSKVVISDMLRRNVRDRSDMRWRVMDMTSMQ 129 (759)
Q Consensus 52 ~l~~~l~~~l~~~~~~~~~~ILDlGCG~G~ls~~L~~~G~~~--VtgIDiS~~~I~~a~~r~~~~~~~i~f~~~D~~~~~ 129 (759)
.+...+.+.+.. .++.+|||||||+|.++. +. .+ .+ |+++|+++.+++.++++... .++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~-~~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINP---QKGQAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFL-GPKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTT-GGGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhcc-CCceEEEECchhhCC
Confidence 445556666654 567899999999999999 65 44 45 99999999999998877632 357999999999876
No 486
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=98.10 E-value=7e-05 Score=79.33 Aligned_cols=148 Identities=19% Similarity=0.234 Sum_probs=96.1
Q ss_pred CCCCeEEEEcccccHHHH----HHHHhCCCCcEEEEEcCHH-----------HHHHHHhhc-CCC--CCC--CeEEEEcc
Q 004354 528 GKSVKAVVIGLGAGLLPM----FLHECMPFVGIEAVELDLT-----------MLNLAEDYF-GFT--QDK--SLKVHITD 587 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~----~L~~~~p~~~i~~VEiDp~-----------v~~vA~~~F-gl~--~~~--rl~v~i~D 587 (759)
....+||.+|.|+|.... .+.+..|..+++.|.++.. .-++++..+ ..+ ++. .++++.+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 556799999999995321 2334557666655544321 122222221 011 123 45788999
Q ss_pred HHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHcc
Q 004354 588 GIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDAL 667 (759)
Q Consensus 588 a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L 667 (759)
+.+.+.+.. +.++|+|++|.|++.. .+++.+.++|+.+.+++
T Consensus 175 a~~~l~~l~-------------------------------~~~~Da~flDgFsP~k-------NPeLWs~e~f~~l~~~~ 216 (308)
T 3vyw_A 175 ARKRIKEVE-------------------------------NFKADAVFHDAFSPYK-------NPELWTLDFLSLIKERI 216 (308)
T ss_dssp HHHHGGGCC-------------------------------SCCEEEEEECCSCTTT-------SGGGGSHHHHHHHHTTE
T ss_pred HHHHHhhhc-------------------------------ccceeEEEeCCCCccc-------CcccCCHHHHHHHHHHh
Confidence 999988764 2479999999999853 67899999999999999
Q ss_pred CcCcEEEEEecCCChhHHHHHHHHHHHhcCceEEEeecCCccEEEEEecCCC
Q 004354 668 SEQGLFIVNLVSRSQATKDMVISRMKMVFNHLFCLQLEEDVNLVLFGLSSES 719 (759)
Q Consensus 668 ~~~Gilv~N~~~~~~~~~~~v~~~l~~vF~~v~~~~~~~~~N~Vl~a~~~~~ 719 (759)
+|||+|+ ..+.....+ ..|+++==.|...+-...--++++|+....
T Consensus 217 ~pgg~la--TYtaag~VR----R~L~~aGF~V~k~~G~g~KReml~A~~~~~ 262 (308)
T 3vyw_A 217 DEKGYWV--SYSSSLSVR----KSLLTLGFKVGSSREIGRKRKGTVASLKAP 262 (308)
T ss_dssp EEEEEEE--ESCCCHHHH----HHHHHTTCEEEEEECC---CEEEEEESSSC
T ss_pred CCCcEEE--EEeCcHHHH----HHHHHCCCEEEecCCCCCCCceeEEecCCC
Confidence 9999998 455555433 345555434666664444557888876553
No 487
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.10 E-value=3.7e-06 Score=89.57 Aligned_cols=115 Identities=10% Similarity=0.190 Sum_probs=71.9
Q ss_pred CCCeEEEEcccccH-HHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcC-CCCCC-----CeEEEEccHHH--HHHhhcccC
Q 004354 529 KSVKAVVIGLGAGL-LPMFLHECMPFVGIEAVELDLTMLNLAEDYFG-FTQDK-----SLKVHITDGIK--FVREMKSSS 599 (759)
Q Consensus 529 ~~~~vLviGlG~G~-l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fg-l~~~~-----rl~v~i~Da~~--~l~~~~~~~ 599 (759)
...+||.||+|+|. +..++.. +..+|++||+++.+++.|++... ..... +++++++|... +-.+...
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~-- 123 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE-- 123 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT--
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc--
Confidence 45799999999995 4444442 34589999999999999998862 11010 25677777521 0011110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 600 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
...+.+||+|++-. .- . ....+.+. ..+|+.+.+.|+|||+|++....
T Consensus 124 -------------------------~~~~~~FD~V~~~~-~l---h-y~~~~~~~--~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 124 -------------------------VFYFGKFNIIDWQF-AI---H-YSFHPRHY--ATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp -------------------------TCCSSCEEEEEEES-CG---G-GTCSTTTH--HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------------------cccCCCeeEEEECc-hH---H-HhCCHHHH--HHHHHHHHHHcCCCCEEEEEeCC
Confidence 00135799998621 10 0 00112222 68999999999999999987754
No 488
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.10 E-value=7.8e-06 Score=86.05 Aligned_cols=125 Identities=14% Similarity=0.055 Sum_probs=89.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-----CCCcEEEEEcCH--------------------------HHHHHHHhhc---
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-----PFVGIEAVELDL--------------------------TMLNLAEDYF--- 573 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-----p~~~i~~VEiDp--------------------------~v~~vA~~~F--- 573 (759)
..+.+||.+|...|..+.+++..+ +..+|.++|..+ ..++.|+++|
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 567899999999998777777654 366899999642 1467788887
Q ss_pred CCCCCCCeEEEEccHHHHHHhhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCC
Q 004354 574 GFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAAD 653 (759)
Q Consensus 574 gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~ 653 (759)
|+. +++++++.||+.+.+.+.. ..+||+|++|++.-.+
T Consensus 185 gl~-~~~I~li~Gda~etL~~~~-------------------------------~~~~d~vfIDaD~y~~---------- 222 (282)
T 2wk1_A 185 DLL-DEQVRFLPGWFKDTLPTAP-------------------------------IDTLAVLRMDGDLYES---------- 222 (282)
T ss_dssp TCC-STTEEEEESCHHHHSTTCC-------------------------------CCCEEEEEECCCSHHH----------
T ss_pred CCC-cCceEEEEeCHHHHHhhCC-------------------------------CCCEEEEEEcCCcccc----------
Confidence 552 4789999999998876542 3579999999864211
Q ss_pred CChHHHHHHHHHccCcCcEEEEEecCCChhHHHHHHHHHHHhcC
Q 004354 654 FVEGSFLLTVKDALSEQGLFIVNLVSRSQATKDMVISRMKMVFN 697 (759)
Q Consensus 654 f~~~~fl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~~vF~ 697 (759)
+..+|+.+..+|+|||++++.=+...+...+ .+..+.+...
T Consensus 223 --~~~~Le~~~p~L~pGGiIv~DD~~~~~G~~~-Av~Ef~~~~~ 263 (282)
T 2wk1_A 223 --TWDTLTNLYPKVSVGGYVIVDDYMMCPPCKD-AVDEYRAKFD 263 (282)
T ss_dssp --HHHHHHHHGGGEEEEEEEEESSCTTCHHHHH-HHHHHHHHTT
T ss_pred --HHHHHHHHHhhcCCCEEEEEcCCCCCHHHHH-HHHHHHHhcC
Confidence 3679999999999999999833332233333 3444444443
No 489
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.09 E-value=3.4e-05 Score=85.37 Aligned_cols=104 Identities=17% Similarity=0.169 Sum_probs=72.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
....+||.||.|.|.+...|... ..++++||+++.+++.|++. ++. .....+..+..+.+...
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~--~~~~~~~~~~~~~l~~~------------ 168 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIR--VRTDFFEKATADDVRRT------------ 168 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCC--EECSCCSHHHHHHHHHH------------
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCC--cceeeechhhHhhcccC------------
Confidence 45579999999999998888876 34999999999999999987 442 11122222333332221
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEec
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLV 678 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~ 678 (759)
+.+||+|+.- .....+ + --..+|+.+++.|+|||+|++...
T Consensus 169 --------------------~~~fD~I~~~----~vl~h~---~---d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 169 --------------------EGPANVIYAA----NTLCHI---P---YVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp --------------------HCCEEEEEEE----SCGGGC---T---THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------------------CCCEEEEEEC----ChHHhc---C---CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2679999982 111111 1 137899999999999999998753
No 490
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.09 E-value=2.8e-06 Score=88.01 Aligned_cols=98 Identities=15% Similarity=0.073 Sum_probs=73.4
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCcccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVV 607 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~ 607 (759)
..+.+||.||+|+|.++..+.. +..+|++||++|.+++.|++.. +++++++|+.++ .
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~----~----------- 89 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENL----A----------- 89 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSC----C-----------
T ss_pred CCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhC----C-----------
Confidence 4568999999999999998887 5679999999999999987765 789999997442 1
Q ss_pred cccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 004354 608 HGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..+..||+|+.-. ....+. --..+|+.+.+.|+ ||.+++-.
T Consensus 90 ------------------~~~~~fD~v~~~~----~l~~~~------~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 90 ------------------LPDKSVDGVISIL----AIHHFS------HLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp ------------------SCTTCBSEEEEES----CGGGCS------SHHHHHHHHHHHBC-SSCEEEEE
T ss_pred ------------------CCCCCEeEEEEcc----hHhhcc------CHHHHHHHHHHHhC-CcEEEEEE
Confidence 1136799999821 111110 12689999999999 99555443
No 491
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.09 E-value=2.2e-06 Score=84.81 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=73.0
Q ss_pred CCCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-CCCCeEEEEccHHHHHHhhcccCccccccc
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-QDKSLKVHITDGIKFVREMKSSSATDEMSV 606 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~ 606 (759)
+.+.+||.||+|.|.++..+....|..+++++|+|+.++++|++++... ...++++ .|...- ..
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~---~~---------- 112 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD---VY---------- 112 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH---HT----------
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc---CC----------
Confidence 5678999999999999999999989999999999999999999998321 1224555 565442 11
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChH--HHHHHHHHccCcCcEEE
Q 004354 607 VHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEG--SFLLTVKDALSEQGLFI 674 (759)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~--~fl~~~~~~L~~~Gilv 674 (759)
...||+|+. .+- -++++. ..+..+.+.|+|+|+||
T Consensus 113 ---------------------~~~~DvVLa--~k~----------LHlL~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 113 ---------------------KGTYDVVFL--LKM----------LPVLKQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp ---------------------TSEEEEEEE--ETC----------HHHHHHTTCCHHHHHHTCEEEEEEE
T ss_pred ---------------------CCCcChhhH--hhH----------HHhhhhhHHHHHHHHHHhCCCCEEE
Confidence 367999997 221 122211 24558999999999876
No 492
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.08 E-value=3.4e-06 Score=92.55 Aligned_cols=100 Identities=16% Similarity=0.219 Sum_probs=73.8
Q ss_pred CCCCeEEEEccc-------ccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHH--HHHhhccc
Q 004354 528 GKSVKAVVIGLG-------AGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIK--FVREMKSS 598 (759)
Q Consensus 528 ~~~~~vLviGlG-------~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~--~l~~~~~~ 598 (759)
..+.+||.||+| +|....++...+|..+|++||++|.+. + ..++++++++|+.+ |......
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---~~~rI~fv~GDa~dlpf~~~l~~- 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---DELRIRTIQGDQNDAEFLDRIAR- 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---CBTTEEEEECCTTCHHHHHHHHH-
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---cCCCcEEEEecccccchhhhhhc-
Confidence 356899999999 666666777778999999999999972 1 35789999999865 4433220
Q ss_pred CcccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEE
Q 004354 599 SATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVN 676 (759)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N 676 (759)
....||+||.|..- . .. -...+|+.+.+.|+|||+|++.
T Consensus 285 ----------------------------~d~sFDlVisdgsH--~-------~~--d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 285 ----------------------------RYGPFDIVIDDGSH--I-------NA--HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp ----------------------------HHCCEEEEEECSCC--C-------HH--HHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------------------ccCCccEEEECCcc--c-------ch--hHHHHHHHHHHhcCCCeEEEEE
Confidence 01579999985311 0 01 1257899999999999999985
No 493
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.07 E-value=6.4e-06 Score=85.46 Aligned_cols=113 Identities=16% Similarity=0.146 Sum_probs=78.2
Q ss_pred CCCCeEEEEcccccHHHHHHHHhC-CCCcEEEEEcCHH------HHHHHHhhcCC-CCCCCeEEEEccHHHHHHhhcccC
Q 004354 528 GKSVKAVVIGLGAGLLPMFLHECM-PFVGIEAVELDLT------MLNLAEDYFGF-TQDKSLKVHITDGIKFVREMKSSS 599 (759)
Q Consensus 528 ~~~~~vLviGlG~G~l~~~L~~~~-p~~~i~~VEiDp~------v~~vA~~~Fgl-~~~~rl~v~i~Da~~~l~~~~~~~ 599 (759)
....+||.||+|.|.++..+...+ |..++++||+++. +++.|++.+.- ...++++++.+| ++.....
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~--- 116 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT--NLSDDLG--- 116 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC--CTTTCCG---
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC--hhhhccC---
Confidence 455799999999999999888885 6679999999997 99999998732 123689999998 2211110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecC
Q 004354 600 ATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVS 679 (759)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~ 679 (759)
......||+|++.- ....+ +. ...+++.++.+++|||.+++.-+.
T Consensus 117 -------------------------~~~~~~fD~v~~~~----~l~~~--~~----~~~~~~~~~~l~~~gG~l~~~~~~ 161 (275)
T 3bkx_A 117 -------------------------PIADQHFDRVVLAH----SLWYF--AS----ANALALLFKNMAAVCDHVDVAEWS 161 (275)
T ss_dssp -------------------------GGTTCCCSEEEEES----CGGGS--SC----HHHHHHHHHHHTTTCSEEEEEEEC
T ss_pred -------------------------CCCCCCEEEEEEcc----chhhC--CC----HHHHHHHHHHHhCCCCEEEEEEec
Confidence 00136799999731 11111 11 134777778888889999886544
Q ss_pred C
Q 004354 680 R 680 (759)
Q Consensus 680 ~ 680 (759)
.
T Consensus 162 ~ 162 (275)
T 3bkx_A 162 M 162 (275)
T ss_dssp S
T ss_pred C
Confidence 3
No 494
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.07 E-value=4.9e-05 Score=75.03 Aligned_cols=95 Identities=13% Similarity=0.185 Sum_probs=70.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.+|.|.|.++..+... +..++++||++|.+++.|++.+. +++++.+|+.++ .
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~----~------------ 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEI----S------------ 108 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGC----C------------
T ss_pred CCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHC----C------------
Confidence 4579999999999999988877 55579999999999999999875 689999997663 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEE
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~ 675 (759)
..||+|++|..-.. . ..-....+++.+.+.| |+++++
T Consensus 109 --------------------~~~D~v~~~~p~~~----~----~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 109 --------------------GKYDTWIMNPPFGS----V----VKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp --------------------CCEEEEEECCCC---------------CHHHHHHHHHHE--EEEEEE
T ss_pred --------------------CCeeEEEECCCchh----c----cCchhHHHHHHHHHhc--CcEEEE
Confidence 46999999532110 0 0112367899999988 454443
No 495
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.06 E-value=1.3e-05 Score=82.90 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=75.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCCCCCCeEEEEccHHHHHHhhcccCccccccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEMSVVH 608 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~~~~ 608 (759)
...+||.||+|+|.++..|... ..++++||+++.+++.|++... . .++.+|+.+. .
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~---~---~~~~~d~~~~----~------------ 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV---K---NVVEAKAEDL----P------------ 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC---S---CEEECCTTSC----C------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC---C---CEEECcHHHC----C------------
Confidence 5579999999999999888876 3589999999999999999864 1 2777775432 1
Q ss_pred ccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 609 GNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
..+..||+|++.-.- ... +.. -..+|+.+++.|+|||.|++.....
T Consensus 110 -----------------~~~~~fD~v~~~~~~------~~~-~~~--~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 110 -----------------FPSGAFEAVLALGDV------LSY-VEN--KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp -----------------SCTTCEEEEEECSSH------HHH-CSC--HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred -----------------CCCCCEEEEEEcchh------hhc-ccc--HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 113679999972100 000 111 4789999999999999999887654
No 496
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.06 E-value=3e-06 Score=90.22 Aligned_cols=117 Identities=13% Similarity=0.065 Sum_probs=79.7
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhcCCC-------CCCCeEEEEccHHHHHHhhcccCcc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYFGFT-------QDKSLKVHITDGIKFVREMKSSSAT 601 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~Fgl~-------~~~rl~v~i~Da~~~l~~~~~~~~~ 601 (759)
.+.+||.||+|+|.+...+... +..++++||+++.+++.|++.+.-. ...+++++.+|+.+..-...
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~----- 107 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDK----- 107 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTT-----
T ss_pred CCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhh-----
Confidence 5679999999999888877774 5679999999999999999886310 13478999999765310000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCC-ChHHHHHHHHHccCcCcEEEEEecCC
Q 004354 602 DEMSVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADF-VEGSFLLTVKDALSEQGLFIVNLVSR 680 (759)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f-~~~~fl~~~~~~L~~~Gilv~N~~~~ 680 (759)
+ ......||+|++-. ....+ ..+. --..+|..+++.|+|||+|++.....
T Consensus 108 -----~-----------------~~~~~~fD~V~~~~----~l~~~---~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 108 -----F-----------------RDPQMCFDICSCQF----VCHYS---FESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp -----C-----------------SSTTCCEEEEEEET----CGGGG---GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred -----c-----------------ccCCCCEEEEEEec----chhhc---cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 0 00124799999821 10000 0000 11489999999999999999987643
No 497
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.06 E-value=4e-06 Score=95.06 Aligned_cols=100 Identities=22% Similarity=0.218 Sum_probs=75.2
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHHHHHhhcccCcccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIKFVREMKSSSATDEMS 605 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~~ 605 (759)
...+||.||.|.|.+++++... +..+|++||+++ +++.|++.+ |+ .++++++.+|..++ ..
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl--~~~v~~~~~d~~~~--~~---------- 221 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNL--TDRIVVIPGKVEEV--SL---------- 221 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTC--TTTEEEEESCTTTC--CC----------
T ss_pred CCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCC--CCcEEEEECchhhC--cc----------
Confidence 4579999999999999999874 667999999999 899999876 54 46899999997653 11
Q ss_pred cccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCC---hHHHHHHHHHccCcCcEEEEEe
Q 004354 606 VVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFV---EGSFLLTVKDALSEQGLFIVNL 677 (759)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~---~~~fl~~~~~~L~~~Gilv~N~ 677 (759)
..+||+|+.+.-. ..+. -.+.+..+++.|+|||++++..
T Consensus 222 ----------------------~~~fD~Ivs~~~~-----------~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 222 ----------------------PEQVDIIISEPMG-----------YMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp ----------------------SSCEEEEECCCCH-----------HHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred ----------------------CCCeEEEEEeCch-----------HhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2479999983210 0111 1456677889999999998543
No 498
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.05 E-value=3.5e-06 Score=85.78 Aligned_cols=110 Identities=10% Similarity=-0.075 Sum_probs=75.5
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcC-HHHHHHH---HhhcCCCCCCCeEEEEccHHHHHHhhcccCccccc
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELD-LTMLNLA---EDYFGFTQDKSLKVHITDGIKFVREMKSSSATDEM 604 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiD-p~v~~vA---~~~Fgl~~~~rl~v~i~Da~~~l~~~~~~~~~~~~ 604 (759)
...+||.||+|+|.++..|....|..+|++||++ +.|+++| ++...-..-++++++.+|+.++ ...
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~--------- 93 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFE--------- 93 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGG---------
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhh---------
Confidence 4568999999999999999887788899999999 8888887 6654211124699999997665 110
Q ss_pred ccccccccccCCCCCCCCCCCCCCCceeEEEEcCCCCCCCCCCCcCCCCCChHHHHHHHHHccCcCcEEEE
Q 004354 605 SVVHGNEITSNNTRSCNGNCTASNARVDILIIDVDSPDSSSGMTCPAADFVEGSFLLTVKDALSEQGLFIV 675 (759)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~~~Gilv~ 675 (759)
....+|.|.+...-+.. . .........+|+.+++.|+|||.|++
T Consensus 94 ----------------------~~d~v~~i~~~~~~~~~---~--~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 94 ----------------------LKNIADSISILFPWGTL---L--EYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp ----------------------GTTCEEEEEEESCCHHH---H--HHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred ----------------------ccCeEEEEEEeCCCcHH---h--hhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 01457777663210000 0 00001135789999999999999998
No 499
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.03 E-value=2.5e-05 Score=80.30 Aligned_cols=60 Identities=20% Similarity=0.140 Sum_probs=51.6
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEcCHHHHHHHHhhc---CCCCCCCeEEEEccHHH
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVELDLTMLNLAEDYF---GFTQDKSLKVHITDGIK 590 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEiDp~v~~vA~~~F---gl~~~~rl~v~i~Da~~ 590 (759)
...+||.||.|+|.+...|....|..+|++||+++.+++.|++.+ ++ .++++++.+|+.+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~~~v~~~~~d~~~ 127 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNL--SDLIKVVKVPQKT 127 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTC--TTTEEEEECCTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCC--CccEEEEEcchhh
Confidence 457999999999988887877767789999999999999999986 44 4579999999765
No 500
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.01 E-value=3.2e-05 Score=81.24 Aligned_cols=108 Identities=20% Similarity=0.223 Sum_probs=74.1
Q ss_pred CCCeEEEEcccccHHHHHHHHhCCCCcEEEEEc-CHHHHHHHHhhc-----CCCC-C----CCeEEEEcc---HHHHH-H
Q 004354 529 KSVKAVVIGLGAGLLPMFLHECMPFVGIEAVEL-DLTMLNLAEDYF-----GFTQ-D----KSLKVHITD---GIKFV-R 593 (759)
Q Consensus 529 ~~~~vLviGlG~G~l~~~L~~~~p~~~i~~VEi-Dp~v~~vA~~~F-----gl~~-~----~rl~v~i~D---a~~~l-~ 593 (759)
...+||.||.|+|.++..+... +..+|++||+ ++.+++.|++.. .... + ++++++..| ...-+ .
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4569999999999999888876 3448999999 999999999887 2110 1 468887443 22222 1
Q ss_pred hhcccCcccccccccccccccCCCCCCCCCCCCCCCceeEEEE-cCCCCCCCCCCCcCCCCCChHHHHHHHHHccC---c
Q 004354 594 EMKSSSATDEMSVVHGNEITSNNTRSCNGNCTASNARVDILII-DVDSPDSSSGMTCPAADFVEGSFLLTVKDALS---E 669 (759)
Q Consensus 594 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~Ii~-D~~s~d~~~g~scPp~~f~~~~fl~~~~~~L~---~ 669 (759)
... ..+||+|+. |+.-.. + .-..+++.+++.|+ |
T Consensus 158 ~~~-------------------------------~~~fD~Ii~~dvl~~~---------~--~~~~ll~~l~~~Lk~~~p 195 (281)
T 3bzb_A 158 CTG-------------------------------LQRFQVVLLADLLSFH---------Q--AHDALLRSVKMLLALPAN 195 (281)
T ss_dssp HHS-------------------------------CSSBSEEEEESCCSCG---------G--GHHHHHHHHHHHBCCTTT
T ss_pred hcc-------------------------------CCCCCEEEEeCcccCh---------H--HHHHHHHHHHHHhcccCC
Confidence 111 257999987 542210 0 13679999999999 9
Q ss_pred --CcEEEEEecC
Q 004354 670 --QGLFIVNLVS 679 (759)
Q Consensus 670 --~Gilv~N~~~ 679 (759)
||.+++-+..
T Consensus 196 ~~gG~l~v~~~~ 207 (281)
T 3bzb_A 196 DPTAVALVTFTH 207 (281)
T ss_dssp CTTCEEEEEECC
T ss_pred CCCCEEEEEEEe
Confidence 9987765544
Done!