BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004355
(759 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/760 (70%), Positives = 632/760 (83%), Gaps = 11/760 (1%)
Query: 1 MVVDNEVKDEDASAESPTSVLEDEDICKANIEAKMEEVVTLDAESNGTLLISKDMEEEEK 60
MV D + ++DAS +SPTSVL +E+ C+ +EE + L A++ + LIS+ M +EE+
Sbjct: 15 MVSDGKT-EKDASGDSPTSVLNEEENCEEKSVTVVEEEILL-AKNGDSSLISEAMAQEEE 72
Query: 61 KLLEARADEENVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQ 120
+LL+ R DEE S +LN+ QF KLDELLTQTQ+Y+EFLLEKMEDIT+NG+E
Sbjct: 73 QLLKLREDEEKANNAG-SAVAPNLNETQFTKLDELLTQTQLYSEFLLEKMEDITINGIES 131
Query: 121 ESEPV-GKKKGRGSKRKAAPQCNTRKAKRAVAAMLTRSKEGEKTENENLSEEERVDKEQR 179
ES+ +K GRG KRKAA Q N KAKRAVAAM++RSKE +T N +L+EEE V K Q
Sbjct: 132 ESQKAEPEKTGRGRKRKAASQYNNTKAKRAVAAMISRSKEDGETINSDLTEEETVIKLQN 191
Query: 180 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHG 239
EL LLTGG+LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTI FL+HLKGNGL G
Sbjct: 192 ELCPLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLDG 251
Query: 240 PYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSY 299
PYLVIAPLSTLSNW NEI+RF PS++AIIYHG K +RDE+RRKHMP+ +GPKFPIV+TSY
Sbjct: 252 PYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSY 311
Query: 300 EVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAE 359
EVA++DA++ LRHY WKY+V+DEGHRLKN KCKLL+ELK++ + NKLLLTGTPLQNNL+E
Sbjct: 312 EVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSE 371
Query: 360 LWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR 419
LWSLL+FILPDIF+S +EF+SWFD S K +E KEE EEKRR Q+V+KLH ILRPF+LR
Sbjct: 372 LWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEE-EEKRRAQVVSKLHGILRPFILR 430
Query: 420 RMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNL 479
RMK DVE LPRKKEII+YATMT+HQ+ FQ+HL+N TLE HL E G+G KGKLNNL
Sbjct: 431 RMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIR-GQGWKGKLNNL 489
Query: 480 MVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQW 539
++QLRKNCNHPDLL+ S YPPVE+IV QCGKFRLL+RLL RLFA NHKVL+FSQW
Sbjct: 490 VIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQW 549
Query: 540 TKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINL 599
TK+LDIM+YYF+EKG+EVCRIDGSV+LDER+RQI+DF+D SS IFLLSTRAGGLGINL
Sbjct: 550 TKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINL 609
Query: 600 TAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLE 659
TAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL+TAQS+E R+LKRA+SKLKLE
Sbjct: 610 TAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLE 669
Query: 660 HVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRADL 719
HVVIG+GQFHQER KS+ LEEED+LALL+++ETAEDK+IQTDI + DL+R+LDR+DL
Sbjct: 670 HVVIGQGQFHQERAKSST--PLEEEDILALLKEDETAEDKLIQTDISDADLDRLLDRSDL 727
Query: 720 IAGCLDDEEKPNAAVYPLKGPGWEVVIPTATGGMLSTLNS 759
E A +P+KGPGWEVV+P+ +GGMLS+LNS
Sbjct: 728 TITA--PGETQAAEAFPVKGPGWEVVLPS-SGGMLSSLNS 764
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 269/621 (43%), Positives = 381/621 (61%), Gaps = 86/621 (13%)
Query: 185 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVI 244
TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV
Sbjct: 201 FTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVC 260
Query: 245 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYEVAL 303
PLSTL NW+ E RF P + ++YHG++++R + ++ H + P+VVTS+E+A+
Sbjct: 261 GPLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVTSFEIAM 320
Query: 304 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 363
D + L+H WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSL
Sbjct: 321 RD-QNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSL 379
Query: 364 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 423
L+F+LPD+F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KS
Sbjct: 380 LNFLLPDVFDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKS 437
Query: 424 DVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL---------------------- 461
DV +P K+E+++YA + Q F ++N+T+ N
Sbjct: 438 DVALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPKRRSRK 497
Query: 462 --------------------------REKVFSAGR-GMKGKLN----NLMVQLRKNCNHP 490
RE+ G ++ ++N N+M+ LRK CNHP
Sbjct: 498 SINYSELDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMMLLRKCCNHP 557
Query: 491 DLLESAFSDSCFYP--PV-------EQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTK 541
++E YP PV E++V GKF +LDR+L L R HKVLVFSQ T
Sbjct: 558 YMIE--------YPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQMTS 609
Query: 542 ILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTA 601
+LDI+ Y + + + R+DGS+ ER++ I FN + +FL+STRAGGLGINLTA
Sbjct: 610 MLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFN-TDPDVFLFLVSTRAGGLGINLTA 668
Query: 602 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHV 661
ADT I+YDSDWNPQ DLQA DRCHRIGQTKPV VYRL TA +++ +I++RA +K KLE +
Sbjct: 669 ADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKL 728
Query: 662 VIGKGQFHQERTK-SNCIDALEEEDLLALLQ--DEETAEDKMIQTDIGEEDLERVLDRAD 718
+I K F ++ S + L+ ++L+ LL+ D E + I +EDLE +LDR+D
Sbjct: 729 IIHKNHFKGGQSGLSQSKNFLDAKELMELLKSRDYEREVKGSREKVISDEDLELLLDRSD 788
Query: 719 LIAGCLDDEEKPNAAVYPLKG 739
LI D+ K A P+KG
Sbjct: 789 LI-----DQMK---ASRPIKG 801
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 289/758 (38%), Positives = 427/758 (56%), Gaps = 135/758 (17%)
Query: 86 DLQFNKLDELLTQTQMYAEFLLEKMEDITV----------------------NGVE-QES 122
++++ +L LL ++ +Y++FLL KME + N ++ E
Sbjct: 62 EIRYRRLQHLLEKSNIYSKFLLTKMEQQQLEEQKKKEKLERKKESLKVKKGKNSIDASEE 121
Query: 123 EPV-GKKKGRGSKRKAAPQCNTRKAKRAVAAMLTRSKEGEKTENENLSEEE--------- 172
+PV KK+GR + + +++ +VA + E E + + NL E+
Sbjct: 122 KPVMRKKRGREDESYNISEVMSKEEILSVAKKNKKENEDENSSSTNLCVEDLQKNKDSNS 181
Query: 173 ----RVDKEQRELVSLL--------------------TGGKLKSYQLKGVKWLISLWQNG 208
R+ + R+ TGG ++ YQ++G++WL LW+NG
Sbjct: 182 IIKDRLSETVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLRMLWENG 241
Query: 209 LNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAII 268
+NGILAD+MGLGKT+Q IA +A + G+ GP+LV PLSTL NW+ E RF P + ++
Sbjct: 242 INGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCGPLSTLPNWMAEFKRFTPDIPTML 301
Query: 269 YHGSKKERDEIRRKHMPRAIGPKF-PIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLK 327
YHG+++ER ++ R R + P+V+TS+E+A+ D R L+H WKYL+VDEGHR+K
Sbjct: 302 YHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMRD-RNALQHCYWKYLIVDEGHRIK 360
Query: 328 NPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGK 387
N KC+L++ELK NKLLLTGTPLQNNL+ELWSLL+F+LPD+F L+ F+SWFD++
Sbjct: 361 NMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKSFESWFDITSL 420
Query: 388 CNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN 447
SE ++ + ++R ++ LH IL PFLLRR+KSDV +P K+E+++YA +++ Q
Sbjct: 421 --SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVVYAPLSKKQEI 478
Query: 448 FQDHLINKTLENHL----REKV-----------------FSAGRGMKGKLNNLMVQL--- 483
F ++N+T+ N +E + +S +L L+ Q+
Sbjct: 479 FYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSKIDDFPNELEKLISQIQPE 538
Query: 484 -----------------------------RKNCNHPDLLESAFSDSCFYP--PV------ 506
RK CNHP L+E YP PV
Sbjct: 539 VDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIE--------YPIDPVTQEFKI 590
Query: 507 -EQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVR 565
E++V GKF +LDR+L L R HKVL+FSQ T +LDI+ Y + + + R+DGS+
Sbjct: 591 DEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMS 650
Query: 566 LDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 625
ER++ + FN + IFL+STRAGGLGINLTAADT I+YDSDWNPQ DLQA DRCH
Sbjct: 651 YSEREKNMHSFN-TDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 709
Query: 626 RIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCI-DALEEE 684
RIGQTKPV VYRL TA +++ +I++RA +K KLE ++I K F ++ N + L+ +
Sbjct: 710 RIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNHFKGGQSGLNLSKNFLDPK 769
Query: 685 DLLALLQ--DEETAEDKMIQTDIGEEDLERVLDRADLI 720
+L+ LL+ D E + I ++DLE +LDR+DLI
Sbjct: 770 ELMELLKSRDYEREIKGSREKVISDKDLELLLDRSDLI 807
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/537 (45%), Positives = 356/537 (66%), Gaps = 28/537 (5%)
Query: 183 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 241
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 180 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 239
Query: 242 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 301
+V+ P STL NW+NE R+VPS+ I + G K R R M + ++ + VTSYE+
Sbjct: 240 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEM---MPGEWDVCVTSYEM 296
Query: 302 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 361
+ + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 297 VIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELW 355
Query: 362 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 421
+LL+F+LPD+F+S ++F SWFD + ++V +LHA+L+PFLLRR+
Sbjct: 356 ALLNFLLPDVFNSADDFDSWFDTKNCLGDQ------------KLVERLHAVLKPFLLRRI 403
Query: 422 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMV 481
K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + S+G+ K +L N+++
Sbjct: 404 KTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMDKMRLLNILM 458
Query: 482 QLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTK 541
QLRK CNHP L + A Y E IV GK LD+LLAR+ + +VL+FSQ T+
Sbjct: 459 QLRKCCNHPYLFDGA-EPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTR 517
Query: 542 ILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTA 601
+LDI+E Y +GYE R+DG +ER+ I FN NSS IF+LSTRAGGLGINL +
Sbjct: 518 LLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLAS 577
Query: 602 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHV 661
AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI++RA KL+L+ +
Sbjct: 578 ADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSI 637
Query: 662 VIGKGQFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRAD 718
VI +G+ +++ + L +E++L +++ T ++++ +ED+ +L+R +
Sbjct: 638 VIQQGRLIDQQS-----NKLAKEEMLQMIRHGATHVFACKESELTDEDIVTILERGE 689
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/675 (40%), Positives = 404/675 (59%), Gaps = 62/675 (9%)
Query: 63 LEARADEENVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQES 122
L+ A E+E + E+ + + + + LL QT+++A F I + + +
Sbjct: 66 LKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHF-------IQPSAQKSPT 118
Query: 123 EPVGKKKGRGSKRKAAPQC-----NTRKAKRAVAAMLTRSKEGEKTENENLSEEERVDKE 177
P+ K GR +K Q + R + E KT N + E
Sbjct: 119 SPLNMKLGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELLSESRKTSNVCIRFEVSP--- 175
Query: 178 QRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NG 236
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK
Sbjct: 176 -----SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRN 230
Query: 237 LHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIV 295
+ GP++V+ P STL NW+NE R+VPS+ I + G K R IR + MP ++ +
Sbjct: 231 IPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP----GEWDVC 286
Query: 296 VTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQN 355
VTSYE+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQN
Sbjct: 287 VTSYEMVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQN 345
Query: 356 NLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 415
NL ELW+LL+F+LPD+F+S ++F SWFD + ++V +LHA+L+P
Sbjct: 346 NLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQ------------KLVERLHAVLKP 393
Query: 416 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 475
FLLRR+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + S+G+ K +
Sbjct: 394 FLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMDKMR 448
Query: 476 LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLV 535
L N+++QLRK CNHP L + A Y E IV GK +LD+LLA+L + +VL+
Sbjct: 449 LLNILMQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLI 507
Query: 536 FSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDER------------KRQIQDFNDVNSSY 583
FSQ T++LDI+E Y +GYE CR+DG +ER + I+ FN NSS
Sbjct: 508 FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSK 567
Query: 584 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 643
IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +
Sbjct: 568 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 627
Query: 644 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQT 703
VE RI++RA KL+L+ +VI +G+ +++ + L +E++L +++ T ++
Sbjct: 628 VEERIVERAEIKLRLDSIVIQQGRLIDQQS-----NKLAKEEMLQMIRHGATHVFASKES 682
Query: 704 DIGEEDLERVLDRAD 718
++ +ED+ +L+R +
Sbjct: 683 ELTDEDITTILERGE 697
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/649 (39%), Positives = 398/649 (61%), Gaps = 46/649 (7%)
Query: 74 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVGKKKGRGS 133
QE E+ + + N+ + LL QT+++A F I + + P+ K GR
Sbjct: 74 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHF-------IQPAAQKTPTSPLKMKPGR-- 124
Query: 134 KRKAAPQCNTRKAKRAVAAMLTRSKEGEKTENENL----SEEERVDKEQRELVSLLTGGK 189
P+ + + ++ R + E+ E+E L S+ V + S + GK
Sbjct: 125 -----PRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGK 179
Query: 190 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLS 248
L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P S
Sbjct: 180 LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS 239
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARK 308
TL NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+ + + +
Sbjct: 240 TLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KS 295
Query: 309 YLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFIL 368
+ +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+L
Sbjct: 296 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLL 355
Query: 369 PDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQM 428
PD+F+S ++F SWFD + + ++V +LH +LRPFLLRR+K+DVE+
Sbjct: 356 PDVFNSADDFDSWFDTNNCLGDQ------------KLVERLHMVLRPFLLRRIKADVEKS 403
Query: 429 LPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCN 488
LP KKE+ +Y +++ QR + ++ K ++ + SAG+ K +L N+++QLRK CN
Sbjct: 404 LPPKKEVKIYVGLSKMQREWYTRILMKDID-----ILNSAGKMDKMRLLNILMQLRKCCN 458
Query: 489 HPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEY 548
HP L + A Y +V GK +LD+LL +L + +VL+FSQ T++LDI+E
Sbjct: 459 HPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILED 517
Query: 549 YFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILY 608
Y + YE CR+DG DER+ I +N+ NS+ +F+LSTRAGGLGINL AD ILY
Sbjct: 518 YCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILY 577
Query: 609 DSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 668
DSDWNPQ+DLQAMDR HRIGQTK V V+R T +VE RI++RA KL+L+ +VI +G
Sbjct: 578 DSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQG-- 635
Query: 669 HQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRA 717
R ++ + ++++L +++ T +++I +ED++ +L+R
Sbjct: 636 ---RLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERG 681
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 459 bits (1182), Expect = e-128, Method: Compositional matrix adjust.
Identities = 254/649 (39%), Positives = 399/649 (61%), Gaps = 46/649 (7%)
Query: 74 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVGKKKGRGS 133
QE E+ + + N+ + LL QT+++A F I + + P+ K GR
Sbjct: 73 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHF-------IQPAAQKTPTSPLKMKPGR-- 123
Query: 134 KRKAAPQCNTRKAKRAVAAMLTRSKEGEKTENENL----SEEERVDKEQRELVSLLTGGK 189
P+ + + ++ R + E+ E+E L S+ V + S + GK
Sbjct: 124 -----PRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGK 178
Query: 190 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLS 248
L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P S
Sbjct: 179 LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS 238
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARK 308
TL NW++E ++VP++ ++ G K++R R + + ++ + VTSYE+ + + +
Sbjct: 239 TLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KS 294
Query: 309 YLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFIL 368
+ +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+L
Sbjct: 295 VFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLL 354
Query: 369 PDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQM 428
PD+F+S ++F SWFD + + ++V +LH +LRPFLLRR+K+DVE+
Sbjct: 355 PDVFNSADDFDSWFDTNNCLGDQ------------KLVERLHMVLRPFLLRRIKADVEKS 402
Query: 429 LPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCN 488
LP KKE+ +Y +++ QR + ++ K ++ + SAG+ K +L N+++QLRK CN
Sbjct: 403 LPPKKEVKIYVGLSKMQREWYTRILMKDID-----ILNSAGKMDKMRLLNILMQLRKCCN 457
Query: 489 HPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEY 548
HP L + A + + +V GK +LD+LL +L + +VL+FSQ T++LDI+E
Sbjct: 458 HPYLFDGAEPGPPYTTDM-HLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILED 516
Query: 549 YFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILY 608
Y + YE CR+DG DER+ I +N+ NS+ +F+LSTRAGGLGINL AD ILY
Sbjct: 517 YCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILY 576
Query: 609 DSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 668
DSDWNPQ+DLQAMDR HRIGQTK V V+R T +VE RI++RA KL+L+ +VI +G
Sbjct: 577 DSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQG-- 634
Query: 669 HQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRA 717
R ++ + ++++L +++ T +++I +ED++ +L+R
Sbjct: 635 ---RLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERG 680
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/539 (44%), Positives = 352/539 (65%), Gaps = 32/539 (5%)
Query: 188 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 246
GK++ YQL G+ WLI L++NG+NGILAD+MGLGKT+QTI+ LA+L + G++GP++V+AP
Sbjct: 187 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 246
Query: 247 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 306
STL NW+NEI RF P + A+ + G+ +ER IR + + KF I VTS+E+A+ +
Sbjct: 247 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLL---VAGKFDICVTSFEMAIKE- 302
Query: 307 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 366
+ LR ++W+Y+++DE HR+KN L K ++ +LL+TGTPLQNNL ELW+LL+F
Sbjct: 303 KTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNF 362
Query: 367 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 426
+LP+IFSS E F WF +SG+ + + ++V +LH +LRPFLLRR+KSDVE
Sbjct: 363 LLPEIFSSAETFDEWFQISGENDQQ------------EVVQQLHKVLRPFLLRRLKSDVE 410
Query: 427 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 486
+ LP KKE IL M++ Q+ + L+ K LE +AG G + +L N+ +QLRK
Sbjct: 411 KGLPPKKETILKVGMSQMQKQYYKALLQKDLE------AVNAG-GERKRLLNIAMQLRKC 463
Query: 487 CNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIM 546
CNHP L + A Y + ++ GK LLD+LL +L R+ +VL+FSQ T++LDI+
Sbjct: 464 CNHPYLFQGA-EPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDIL 522
Query: 547 EYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCI 606
E Y +GY CRIDG+ DER I+ +N S +FLLSTRAGGLGINL AD I
Sbjct: 523 EDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVI 582
Query: 607 LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKG 666
LYDSDWNPQ+DLQA DR HRIGQ K V V+R T ++E ++++RA+ KL L+ +VI +G
Sbjct: 583 LYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQG 642
Query: 667 QFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRADLIAGCLD 725
+ +++T + +++LL +++ + I +ED++R++ + + LD
Sbjct: 643 RLAEQKT-------VNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELD 694
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 240/539 (44%), Positives = 351/539 (65%), Gaps = 32/539 (5%)
Query: 188 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 246
GK++ YQL G+ WLI L++NG+NGILAD+MGLGKT+QTI+ L +L + G+ GP++V+AP
Sbjct: 229 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 288
Query: 247 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 306
STL NW+ EI RF P + A+ + G+ +ER+ IR + KF + VTS+E+A+ +
Sbjct: 289 KSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPG---KFDVCVTSFEMAIKE- 344
Query: 307 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 366
+ L+ ++W+Y+++DE HR+KN L K ++ +LL+TGTPLQNNL ELWSLL+F
Sbjct: 345 KTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNF 404
Query: 367 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 426
+LP+IFSS E F WF +SG+ + + ++V +LH +LRPFLLRR+KSDVE
Sbjct: 405 LLPEIFSSAETFDEWFQISGENDQQ------------EVVQQLHKVLRPFLLRRLKSDVE 452
Query: 427 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 486
+ LP KKE IL M++ Q+ + L+ K LE V +AG G + +L N+ +QLRK
Sbjct: 453 KGLPPKKETILKVGMSQMQKQYYRALLQKDLE------VINAG-GERKRLLNIAMQLRKC 505
Query: 487 CNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIM 546
CNHP L + A Y E +VE GK LLD+LL +L R+ +VL+FSQ T++LDI+
Sbjct: 506 CNHPYLFQGA-EPGPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDIL 564
Query: 547 EYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCI 606
E Y +GY+ CRIDG+ ++R I+ FN S +FLLSTRAGGLGINL AD +
Sbjct: 565 EDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVV 624
Query: 607 LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKG 666
LYDSDWNPQ DLQA DR HRIGQ K V V+R T ++E ++++RA+ KL L+ +VI +G
Sbjct: 625 LYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQG 684
Query: 667 QFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRADLIAGCLD 725
+ +++T + ++DLL +++ + I +ED++R++ + + LD
Sbjct: 685 RLAEQKT-------VNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELD 736
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/538 (42%), Positives = 351/538 (65%), Gaps = 30/538 (5%)
Query: 183 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 241
+ + G+++ YQ++G+ W+ISL++NG+NGILAD+MGLGKT+QTI+ L +LK GP+
Sbjct: 121 AYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPH 180
Query: 242 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 300
+VI P STL NWVNE ++ PS+ A+ G + R+ IR MP ++ + VTSYE
Sbjct: 181 IVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMP----GEWDVCVTSYE 236
Query: 301 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 360
+ + + + + +NW+YLV+DE HR+KN K KL + L+ N+LL+TGTPLQNNL EL
Sbjct: 237 MCIRE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHEL 295
Query: 361 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 420
W+LL+F+LPD+F+S E+F WF+ + + + + +LHA+L+PFLLRR
Sbjct: 296 WALLNFLLPDVFNSSEDFDEWFNTNTCLGDDAL------------ITRLHAVLKPFLLRR 343
Query: 421 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 480
+K++VE+ L KKE+ ++ +++ QR++ ++ K ++ V AG+ K +L N++
Sbjct: 344 LKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDID-----VVNGAGKVEKMRLQNIL 398
Query: 481 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWT 540
+QLRK NHP L + A Y +V GK +LD+LL +L + +VL+FSQ T
Sbjct: 399 MQLRKCTNHPYLFDGA-EPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMT 457
Query: 541 KILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLT 600
++LDI+E Y + + Y CR+DG ++R RQIQ+FN NS+ +F+LSTRAGGLGINL
Sbjct: 458 RMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLA 517
Query: 601 AADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEH 660
AD I+YDSDWNPQMDLQAMDR HRIGQ K V V+RL T +VE +I++RA KL+L+
Sbjct: 518 TADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDK 577
Query: 661 VVIGKGQFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRAD 718
+VI G+ R+ + L ++++L +++ +TDI +ED++ +L+R +
Sbjct: 578 MVIQGGRLVDNRS-----NQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILERGE 630
>sp|P43610|IRC5_YEAST Uncharacterized ATP-dependent helicase IRC5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IRC5 PE=3
SV=2
Length = 853
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/707 (37%), Positives = 391/707 (55%), Gaps = 100/707 (14%)
Query: 36 EEVVTLDAESNGTLLISKDMEEEEKKLLEARADEENVEQENV----SKNEDHLNDLQFNK 91
+E + LD+E + D E + ++++ A + EQ+++ S+ + L+ K
Sbjct: 79 DEDIQLDSEDDS------DTEAVQAQVVDKLAKDTKSEQKSLDDELSEMDTKTVSLKLKK 132
Query: 92 LDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVGKKKGRGSKRKAAPQCNTRKAKRAVA 151
L+E + Q+Q+Y+ + + T+ E K S + + K+++
Sbjct: 133 LNEFVRQSQVYSSIIAD-----TLLHRSNEVANANTKDNSNSDDEEHSSKKRKTKKKSIT 187
Query: 152 AMLTRSKEGEKTENENLSEEERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNG 211
+ K+ E T +N + ++ K+ R LL LK YQL+G+ WLI+L++NGLNG
Sbjct: 188 DFFKKQKKNEDTTTQNGAPDDAAIKQPR----LLKNCILKPYQLEGLNWLITLYENGLNG 243
Query: 212 ILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHG 271
ILAD+MGLGKT+Q+IA LA + GP+LV APLSTL NW+NE ++F P + + Y+G
Sbjct: 244 ILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYG 303
Query: 272 SK--KERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNP 329
+ KER + + G IV+TSYE+ L D + NWK+L+VDEGHRLKN
Sbjct: 304 TNGYKERSAKLKNFFKQHGGTG--IVITSYEIILRDTDLIMSQ-NWKFLIVDEGHRLKNI 360
Query: 330 KCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFD-----L 384
C+L+KELK I N+LLLTGTPLQNNLAELWSLL+FI+PDIF+ E F WFD L
Sbjct: 361 NCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNL 420
Query: 385 SGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV-EQMLPRKKEIILYATMTE 443
NSE + + + ++ + +++ LH IL+PFLLRR+K V +LP K+E I+ MT
Sbjct: 421 GSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKREYIINCPMTS 480
Query: 444 HQRNFQD----------------------------HLINKTLENHLR------------- 462
Q F H+ N+++ + +
Sbjct: 481 AQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIRDFINYKLSGNETSNTDN 540
Query: 463 ---------EKVFSAGRGMK---GKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP----- 505
+K++ M+ KL N+M+QLR+ +++S F FY P
Sbjct: 541 KINPTLLQMDKLYKKNLQMEISNKKLQNMMMQLRQ------IIDSTF---LFYFPYLHPE 591
Query: 506 ---VEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDG 562
+E +++ GK ++L +L+ L + HKVL++SQ+ +LD++E + + + RIDG
Sbjct: 592 DLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDG 651
Query: 563 SVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 622
SV + RK Q++ FN + IFLLSTRA GLGINL ADT +L+DSDWNPQ+DLQAMD
Sbjct: 652 SVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMD 711
Query: 623 RCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFH 669
RCHRIGQ PV VYRL ++E IL RA +K LE +VI G+F+
Sbjct: 712 RCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFN 758
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/592 (41%), Positives = 355/592 (59%), Gaps = 39/592 (6%)
Query: 149 AVAAMLTRSKEGEKTENENLS-----EEER------VDKEQRELV----SLLTGGKLKSY 193
A A + +S+ GE +E++ E++R V RE+V S+L GGKLK Y
Sbjct: 361 AAAVKVQQSQFGESAYDEDMDRRMNPEDDRKIDYYNVAHNIREVVTEQPSILVGGKLKEY 420
Query: 194 QLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLSTLSN 252
QL+G++W+ISL+ N LNGILAD+MGLGKTIQTI+ + HL + +GP+LVI PLSTL+N
Sbjct: 421 QLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLTN 480
Query: 253 WVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRH 312
W E R+ PS+ I+Y G ++R+ P+ F +++T+YE + D R L
Sbjct: 481 WTMEFERWAPSIVKIVYKGPP----QVRKALHPQVRHSNFQVLLTTYEYIIKD-RPLLSR 535
Query: 313 YNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 371
W Y+++DEGHR+KN + KL L Y +L+LTGTPLQNNL ELW+LL+F+LP I
Sbjct: 536 IKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRI 595
Query: 372 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPR 431
F+S++ F WF+ K EL E+ ++ +LH +LRPFLLRR+K DVE LP
Sbjct: 596 FNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAELPD 655
Query: 432 KKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG--KLNNLMVQLRKNCNH 489
K E ++ M+ Q+ + ++ H V A RG G L N ++QL+K CNH
Sbjct: 656 KVEKVIRCQMSGLQQK-----LYYQMKKHGMLYVEDAKRGKTGIKGLQNTVMQLKKICNH 710
Query: 490 PDLLES---AFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIM 546
P + E + + F + + GKF LLDR+L +LF H++L+F Q T+I++IM
Sbjct: 711 PFVFEDVERSIDPTGF--NYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIM 768
Query: 547 EYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCI 606
E Y + + + R+DGS + D+R + + FND + +FLLSTRAGGLG+NL ADT I
Sbjct: 769 EDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVI 828
Query: 607 LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKG 666
++DSDWNP DLQA DR HRIGQTK V +YRL T +SVE IL RA KL ++ VI G
Sbjct: 829 IFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARAQYKLDIDGKVIQAG 888
Query: 667 QFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRAD 718
+F + T E L +LL++E E+ + ++ +++L +L R D
Sbjct: 889 KFDNKSTPEE-----REAFLRSLLENENGEEENDEKGELDDDELNEILARGD 935
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/569 (44%), Positives = 342/569 (60%), Gaps = 30/569 (5%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
ERVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +
Sbjct: 740 ERVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITY 795
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + ++GP+L+I PLSTLSNW E ++ PSV + Y GS RR +P+
Sbjct: 796 LMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPA----ARRAFVPQLRSG 851
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLL 348
KF +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLL
Sbjct: 852 KFNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV-APRRLLL 909
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRR 967
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K + +
Sbjct: 968 LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK 1027
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKFRLLDR 521
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GKF LLDR
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+L +L A NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEETAEDKMI 701
SVE +IL A KL ++ VI G F Q ++ S+ A L A+L+ EE E +
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQ-KSSSHERRAF----LQAILEHEEQDESRHC 1262
Query: 702 QTDIGEEDLERVLDRADLIAGCLDDEEKP 730
T G A AG D E+P
Sbjct: 1263 STGSGSASFAHT---APPPAGVNPDLEEP 1288
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/545 (43%), Positives = 343/545 (62%), Gaps = 37/545 (6%)
Query: 158 KEGEKTENENL---SEEERVDKEQRELV-----SLLTGGKLKSYQLKGVKWLISLWQNGL 209
++ EK E+ L EEE VD Q ++ S + GKL+ YQ++G+ WLISL +N L
Sbjct: 144 RKTEKEEDAELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKL 203
Query: 210 NGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAII 268
+GILAD+MGLGKT+QTI+FL +L+ + GP+L+I P STL NW E ++ P+V+ ++
Sbjct: 204 SGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLV 263
Query: 269 YHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKN 328
HG K R +I R + A +F +++TSYE+ + + + L+ W+Y+V+DE HR+KN
Sbjct: 264 LHGDKDTRADIVRNIILEA---RFDVLITSYEMVIRE-KNALKRLAWQYIVIDEAHRIKN 319
Query: 329 PKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKC 388
+ L + ++ N+LL+TGTPLQNNL ELW+LL+F+LPDIF E F WF+ +
Sbjct: 320 EQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QN 376
Query: 389 NSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNF 448
NSE +E ++ +LH++L PFLLRR+K+DVE+ L K E +Y MT+ Q +
Sbjct: 377 NSEQDQE--------IVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQW 428
Query: 449 QDHLINKTLENHLREKVFSA--GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPV 506
L+ K ++ V A R K +L N+++QLRK CNHP L E A Y
Sbjct: 429 YKSLLEKDID-----AVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGA-EPGPPYTTD 482
Query: 507 EQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRL 566
E ++ GK +LD+LL RL + +VL+FSQ +++LDI+E Y + +E CRIDGS
Sbjct: 483 EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSH 542
Query: 567 DERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHR 626
+ER I ++N NS +FLL+TRAGGLGINL ADT IL+DSDWNPQ DLQAMDR HR
Sbjct: 543 EERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHR 602
Query: 627 IGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDL 686
IGQ K VHVYR T ++E ++++RA KL+L+ +VI +G + + N D DL
Sbjct: 603 IGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKD-----DL 657
Query: 687 LALLQ 691
L ++Q
Sbjct: 658 LDMIQ 662
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 321/512 (62%), Gaps = 22/512 (4%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
ERVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +
Sbjct: 732 ERVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITY 787
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + ++GP+L+I PLSTLSNW E ++ PSV + Y GS RR +P+
Sbjct: 788 LMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPA----ARRAFVPQLRSG 843
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLL 348
KF +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLL
Sbjct: 844 KFNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV-APRRLLL 901
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +
Sbjct: 902 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRR 959
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K + +
Sbjct: 960 LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK 1019
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKFRLLDR 521
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GKF LLDR
Sbjct: 1020 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1079
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+L +L A NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1080 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1139
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1140 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1199
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 673
SVE +IL A KL ++ VI G F Q+ +
Sbjct: 1200 NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS 1231
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 321/512 (62%), Gaps = 22/512 (4%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
ERVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +
Sbjct: 740 ERVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITY 795
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + ++GP+L+I PLSTLSNW E ++ PSV + Y GS RR +P+
Sbjct: 796 LMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPA----ARRAFVPQLRSG 851
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLL 348
KF +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLL
Sbjct: 852 KFNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV-APRRLLL 909
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRR 967
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K + +
Sbjct: 968 LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK 1027
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKFRLLDR 521
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GKF LLDR
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+L +L A NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 673
SVE +IL A KL ++ VI G F Q+ +
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS 1239
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 321/512 (62%), Gaps = 22/512 (4%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
ERVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +
Sbjct: 740 ERVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITY 795
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + ++GP+L+I PLSTLSNW E ++ PSV + Y GS RR +P+
Sbjct: 796 LMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPA----ARRAFVPQLRSG 851
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLL 348
KF +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLL
Sbjct: 852 KFNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV-APRRLLL 909
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +
Sbjct: 910 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRR 967
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K + +
Sbjct: 968 LHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK 1027
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKFRLLDR 521
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GKF LLDR
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+L +L A NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 673
SVE +IL A KL ++ VI G F Q+ +
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS 1239
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 240/533 (45%), Positives = 344/533 (64%), Gaps = 26/533 (4%)
Query: 156 RSKEGEKTENENLSEEERVDKEQREL----VSLLTGGKLKSYQLKGVKWLISLWQNGLNG 211
R K + + E L EE+ D E E G+L+ YQ++GV WL+SL +N + G
Sbjct: 158 RRKTEHEEDAELLKEEDSDDDESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAG 217
Query: 212 ILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYH 270
ILAD+MGLGKT+QTI+FL +L+ + GP+LVIAP STL+NW+ EI+R+ P V+A I
Sbjct: 218 ILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQ 277
Query: 271 GSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPK 330
G K+ER E+ +K + +G F +V+ SYE+ + + + L+ NW+Y+++DE HR+KN +
Sbjct: 278 GDKEERAELIQKKL---LGCDFDVVIASYEIIIRE-KSPLKKINWEYIIIDEAHRIKNEE 333
Query: 331 CKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNS 390
L + L+ N+LL+TGTPLQNNL ELW+LL+F+LPDIFS ++F WF +S
Sbjct: 334 SMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF------SS 387
Query: 391 EVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQD 450
E +E+ + ++V +LH +L+PFLLRR+KSDVE L KKE+ LY M+ Q+ +
Sbjct: 388 ESTEED-----QDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYK 442
Query: 451 HLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIV 510
++ K L+ + + K +L N+M+QLRK CNHP L + A Y E +V
Sbjct: 443 KILEKDLD---AVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGA-EPGPPYTTDEHLV 498
Query: 511 EQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERK 570
K ++LD+LL +L +VL+FSQ +++LDI+E Y + YE CRIDGS ++R
Sbjct: 499 YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRI 558
Query: 571 RQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQT 630
+ I D+N +S +FLL+TRAGGLGINLT+AD +LYDSDWNPQ DLQAMDR HRIGQ
Sbjct: 559 QAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQK 618
Query: 631 KPVHVYRLATAQSVEGRILKRAFSKLKLEHVVI--GKGQFHQERTKSNCIDAL 681
K V V+RL T SVE +IL+RA KL+L+ +VI + ++ K++ DAL
Sbjct: 619 KQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDAL 671
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/512 (44%), Positives = 319/512 (62%), Gaps = 22/512 (4%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
ERV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +
Sbjct: 715 ERVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 770
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+
Sbjct: 771 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSG 826
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLL 348
KF +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LL
Sbjct: 827 KFNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV-APRRILL 884
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +
Sbjct: 885 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRR 942
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K + +
Sbjct: 943 LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKK 1002
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKFRLLDR 521
G+G L N ++QLRK CNHP + +E +F++ Y ++ GKF LLDR
Sbjct: 1003 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1062
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+L +L A NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1063 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1122
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1123 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1182
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 673
SVE +IL A KL ++ VI G F Q+ +
Sbjct: 1183 NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS 1214
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/512 (44%), Positives = 319/512 (62%), Gaps = 22/512 (4%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
ERV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +
Sbjct: 710 ERVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 765
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+
Sbjct: 766 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSG 821
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLL 348
KF +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LL
Sbjct: 822 KFNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYV-APRRILL 879
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +
Sbjct: 880 TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRR 937
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K + +
Sbjct: 938 LHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKK 997
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKFRLLDR 521
G+G L N ++QLRK CNHP + +E +F++ Y ++ GKF LLDR
Sbjct: 998 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1057
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+L +L A NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1058 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1117
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1118 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1177
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 673
SVE +IL A KL ++ VI G F Q+ +
Sbjct: 1178 NSVEEKILAAAKYKLNVDQKVIQAGMFDQKSS 1209
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 259/689 (37%), Positives = 375/689 (54%), Gaps = 82/689 (11%)
Query: 55 MEEEEKKLLEA---------RADEENVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEF 105
+E+EEKK +E RAD+E + + K +D ++ LL QT Y E
Sbjct: 755 LEKEEKKRIERSARQRLQALRADDEAAYLQLLDKAKD-------TRITHLLKQTDQYLEN 807
Query: 106 LLEKMEDITVNGVEQESEPVGKKKGRGSKRKAAPQCNTRKAKRAVAAMLTRSKEGEKTEN 165
L + ++Q + G G+GS N+ + + ++ E+ +N
Sbjct: 808 LTRAVR------IQQSNIHSGNTSGKGS--------NSAELEAPIS---------EEDKN 844
Query: 166 ENLSEEERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQT 225
+ + E+ E + GG LK YQLKG++W++SL+ N LNGILAD+MGLGKTIQT
Sbjct: 845 LDYFKVAHRIHEEVEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQT 904
Query: 226 IAFLAHL-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM 284
IAF+ +L + GP+L+I PLSTL+NW+ E ++ PSV I Y G ++R+
Sbjct: 905 IAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPP----QLRKTLQ 960
Query: 285 PRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIG 343
+ F +++T++E + D R L W ++++DEGHR+KN + KL L Y
Sbjct: 961 SQIRSSNFNVLLTTFEYIIKD-RPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQ 1019
Query: 344 NKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRG 403
+L+LTGTPLQNNL ELW+LL+F+LP IF+S++ F WF+ K L E+
Sbjct: 1020 YRLILTGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEAL 1079
Query: 404 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEII-----------LYATMTEHQRNFQDHL 452
++ +LH +LRPFL RR+K DVE+ LP K E + LY M +H F D
Sbjct: 1080 LIIKRLHKVLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGE 1139
Query: 453 INKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP---VEQI 509
KT G+KG L N ++QL+K CNHP + E + P V+ +
Sbjct: 1140 KGKT--------------GIKG-LQNTVMQLKKICNHPFIFEDV--ERAIDPSGTNVDLL 1182
Query: 510 VEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDER 569
GKF LLDR+L +LF HK L+F Q T+I+ IME Y K ++ R+DGS + D+R
Sbjct: 1183 WRAAGKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDR 1242
Query: 570 KRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQ 629
+ FND S IF+LSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ
Sbjct: 1243 CSLLAQFNDPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQ 1302
Query: 630 TKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLAL 689
TK V + RL T +S+E IL RA KL L+ VI G+F + T E L +L
Sbjct: 1303 TKEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEE-----REAFLRSL 1357
Query: 690 LQDEETAEDKMIQTDIGEEDLERVLDRAD 718
L+ + + + ++ +++L ++ R D
Sbjct: 1358 LEHDGDDDHDLTYGELQDDELNELISRTD 1386
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/490 (42%), Positives = 321/490 (65%), Gaps = 29/490 (5%)
Query: 185 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLV 243
+ G+++ YQ++G+ WL SL N +NGILAD+MGLGKT+QTI+ + ++K P+LV
Sbjct: 127 IENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLV 186
Query: 244 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 303
I P STL NW NE ++ PS++A++ G + R+++ R + + KF + T+YE+ L
Sbjct: 187 IVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVI---LPQKFDVCCTTYEMML 243
Query: 304 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 363
+ L+ NW+Y+++DE HR+KN K KL + ++ + N+LL+TGTPLQNNL ELW+L
Sbjct: 244 K-VKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWAL 302
Query: 364 LHFILPDIFSSLEEFQSWFD---LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 420
L+F+LPDIF+S ++F SWF +SG + +V +LH +L+PFLLRR
Sbjct: 303 LNFLLPDIFTSSDDFDSWFSNDAMSGNTD---------------LVQRLHKVLQPFLLRR 347
Query: 421 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 480
+KSDVE+ L KKE+ +Y +++ QR + ++ K ++ + AG+ K +L N++
Sbjct: 348 IKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDID-----IINGAGKVEKARLMNIL 402
Query: 481 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWT 540
+ LRK NHP L + A F + +V+ GK +LD+LL + + +VL+FSQ++
Sbjct: 403 MHLRKCVNHPYLFDGAEPGPPFTTD-QHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFS 461
Query: 541 KILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLT 600
++LD++E + + YE CR+DGS ++R I+ +N +S IF+L+TRAGGLGINL
Sbjct: 462 RMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLA 521
Query: 601 AADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEH 660
AD I+YDSDWNPQ DLQAMDR HRIGQ K V V+RL T +V+ RI+++A +KL+L++
Sbjct: 522 TADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDN 581
Query: 661 VVIGKGQFHQ 670
+VI +G+ +
Sbjct: 582 IVIQQGRMSE 591
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/538 (42%), Positives = 323/538 (60%), Gaps = 42/538 (7%)
Query: 173 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 232
R+ ++ ++ S+L GG LK YQ+KG++W++SL+ N LNGILAD+MGLGKTIQTI+ L +L
Sbjct: 750 RIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYL 809
Query: 233 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 291
+ + GPYLVI PLSTLSNW +E +++ P++ I + GS ER + + +
Sbjct: 810 YEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNER----KAKQAKIRAGE 865
Query: 292 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTG 350
F +V+T++E + + R L W ++++DEGHR+KN + KL L + +L+LTG
Sbjct: 866 FDVVLTTFEYIIKE-RALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTG 924
Query: 351 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 410
TPLQNNL ELW+LL+F+LP IF+S++ F WF+ K EL E+ ++ +LH
Sbjct: 925 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLH 984
Query: 411 AILRPFLLRRMKSDVEQMLPRKKEI-----------ILYATMTEHQRNFQDHLINKTLEN 459
+LRPFLLRR+K DVE+ LP K E I+Y M +++R F NK +
Sbjct: 985 KVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKM-- 1042
Query: 460 HLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVE---QIVEQCGKF 516
G++G NN ++QL+K CNHP + E + P E I GKF
Sbjct: 1043 ----------VGLRG-FNNQIMQLKKICNHPFVFEEV--EDQINPTRETNDDIWRVAGKF 1089
Query: 517 RLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDF 576
LLDR+L +L A H+VL+F Q T+I+DIME + + R+DG + DER ++ F
Sbjct: 1090 ELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLF 1149
Query: 577 NDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 636
N +S Y F+LSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ V +
Sbjct: 1150 NAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRIL 1209
Query: 637 RLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEE 694
RL T SVE IL+RA+ KL ++ VI G+F + T E+E LL L D E
Sbjct: 1210 RLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSE------EQEALLRSLLDAE 1261
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/504 (44%), Positives = 306/504 (60%), Gaps = 15/504 (2%)
Query: 180 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 238
E S++ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTI+ + +L +
Sbjct: 763 EQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVM 822
Query: 239 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 298
GPYL+I PLSTL NWV E ++ P+V + Y GS + R ++ + RA KF +++T+
Sbjct: 823 GPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQM--RAT--KFNVLLTT 878
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGN-KLLLTGTPLQNNL 357
YE + D + L WKY+++DEGHR+KN CKL + L I +LLLTGTPLQN L
Sbjct: 879 YEYVIKD-KAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKL 937
Query: 358 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 417
ELW+LL+F+LP IF S F+ WF+ E K EL E+ ++ +LH +LRPFL
Sbjct: 938 PELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE--KVELNEEETILIIRRLHKVLRPFL 995
Query: 418 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN 477
LRR+K +VE LP K E I+ M+ QR H+ +K + + G+G L
Sbjct: 996 LRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALM 1055
Query: 478 NLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQ------CGKFRLLDRLLARLFARNH 531
N +VQLRK CNHP + + C + +V GKF LLDR+L +L A NH
Sbjct: 1056 NTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNH 1115
Query: 532 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 591
+VL+F Q T+ + I+E Y + + R+DG+ + ++R ++ FN S +FLLSTR
Sbjct: 1116 RVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTR 1175
Query: 592 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 651
AGGLG+NL ADT +++DSDWNP DLQA DR HRIGQ V V RL T SVE RIL
Sbjct: 1176 AGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILAA 1235
Query: 652 AFSKLKLEHVVIGKGQFHQERTKS 675
A KL ++ VI G F Q+ T S
Sbjct: 1236 ARYKLNMDEKVIQAGMFDQKSTGS 1259
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/532 (42%), Positives = 329/532 (61%), Gaps = 29/532 (5%)
Query: 172 ERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAH 231
E++DK+ S+L GG LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQ+I+ + +
Sbjct: 456 EKIDKQP----SILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITY 511
Query: 232 L-KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP 290
L + GP+LVI PLST++NW E ++ PS++ IIY G+ +R + +H R +G
Sbjct: 512 LYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSL--QHQIR-VG- 567
Query: 291 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLT 349
F +++T+YE + D + L ++W ++++DEGHR+KN + KL + Y N+L+LT
Sbjct: 568 NFDVLLTTYEYIIKD-KSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILT 626
Query: 350 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 409
GTPLQNNL ELW+LL+F+LP IF+S + F+ WF+ K EL E+ ++ +L
Sbjct: 627 GTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRL 686
Query: 410 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 469
H +LRPFLLRR+K +VE+ LP K E ++ ++ Q+ ++ N L + G
Sbjct: 687 HKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLK---HNALFVGAGTEG 743
Query: 470 R---GMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP---VEQIVEQCGKFRLLDRLL 523
G+KG LNN ++QLRK CNHP + + + P + + GKF LLDR+L
Sbjct: 744 ATKGGIKG-LNNKIMQLRKICNHPFVFDEV--EGVVNPSRGNSDLLFRVAGKFELLDRVL 800
Query: 524 ARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 583
+ A H+VL+F Q T+++DIME + K + R+DGS + +ER + FN +S Y
Sbjct: 801 PKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDY 860
Query: 584 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 643
FLLSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T S
Sbjct: 861 FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDS 920
Query: 644 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEET 695
VE IL+RA KL ++ VI G+F + T A E+E L L + ET
Sbjct: 921 VEEVILERAMQKLDIDGKVIQAGKFDNKST------AEEQEAFLRRLIESET 966
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/558 (41%), Positives = 325/558 (58%), Gaps = 61/558 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 871
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----------PRAIGPKFPIVVTS 298
T++NW E + + ++ I+YHGS R I++ M P A KF ++T+
Sbjct: 872 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAY--KFDALITT 928
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 358
+E+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN +
Sbjct: 929 FEMILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 987
Query: 359 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
EL+SLLHF+ P F S EF F G +E + V KL AIL+P +L
Sbjct: 988 ELFSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMML 1032
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN- 477
RR+K DVE+ L K+E I+ +T Q+ + ++ K S G G N
Sbjct: 1033 RRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF------SFLSKGAGHTNMPNL 1086
Query: 478 -NLMVQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKFRLLDRLLAR 525
N M++LRK CNHP L+ A F ++C P ++ +V GK L+D+LL +
Sbjct: 1087 LNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPK 1146
Query: 526 LFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 585
L A HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +
Sbjct: 1147 LKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1206
Query: 586 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 645
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E
Sbjct: 1207 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1266
Query: 646 GRILKRAFSKLKLEHVVI-------GKGQFHQERTKSNCIDALEEEDLLALLQDEETAED 698
+ +A KL L+ V+ G Q+ +K D L + A++++++
Sbjct: 1267 REMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEG-- 1324
Query: 699 KMIQTDIGEEDLERVLDR 716
+ EED++++L R
Sbjct: 1325 ----SKFCEEDIDQILLR 1338
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/558 (41%), Positives = 325/558 (58%), Gaps = 61/558 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 869
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----------PRAIGPKFPIVVTS 298
T++NW E + + ++ I+YHGS R I++ M P A KF ++T+
Sbjct: 870 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAY--KFDALITT 926
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 358
+E+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN +
Sbjct: 927 FEMILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 985
Query: 359 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
EL+SLLHF+ P F S EF F G +E + V KL AIL+P +L
Sbjct: 986 ELFSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMML 1030
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN- 477
RR+K DVE+ L K+E I+ +T Q+ + ++ K S G G N
Sbjct: 1031 RRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS------FLSKGAGHTNMPNL 1084
Query: 478 -NLMVQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKFRLLDRLLAR 525
N M++LRK CNHP L+ A F ++C P ++ +V GK L+D+LL +
Sbjct: 1085 LNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPK 1144
Query: 526 LFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 585
L A HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +
Sbjct: 1145 LKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1204
Query: 586 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 645
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E
Sbjct: 1205 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1264
Query: 646 GRILKRAFSKLKLEHVVI-------GKGQFHQERTKSNCIDALEEEDLLALLQDEETAED 698
+ +A KL L+ V+ G Q+ +K D L + A++++++
Sbjct: 1265 REMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEG-- 1322
Query: 699 KMIQTDIGEEDLERVLDR 716
+ EED++++L R
Sbjct: 1323 ----SKFCEEDIDQILLR 1336
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 234/558 (41%), Positives = 325/558 (58%), Gaps = 61/558 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 869
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----------PRAIGPKFPIVVTS 298
T++NW E + + ++ I+YHGS R I++ M P A KF ++T+
Sbjct: 870 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAY--KFDALITT 926
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 358
+E+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN +
Sbjct: 927 FEMILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 985
Query: 359 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
EL+SLLHF+ P F S EF F G +E + V KL AIL+P +L
Sbjct: 986 ELFSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMML 1030
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN- 477
RR+K DVE+ L K+E I+ +T Q+ + ++ K S G G N
Sbjct: 1031 RRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF------SFLSKGAGHTNMPNL 1084
Query: 478 -NLMVQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKFRLLDRLLAR 525
N M++LRK CNHP L+ A F ++C P ++ +V GK L+D+LL +
Sbjct: 1085 LNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPK 1144
Query: 526 LFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 585
L A HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +
Sbjct: 1145 LKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1204
Query: 586 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 645
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E
Sbjct: 1205 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYE 1264
Query: 646 GRILKRAFSKLKLEHVVI-------GKGQFHQERTKSNCIDALEEEDLLALLQDEETAED 698
+ +A KL L+ V+ G Q+ +K D L + A++++++
Sbjct: 1265 REMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDEG-- 1322
Query: 699 KMIQTDIGEEDLERVLDR 716
+ EED++++L R
Sbjct: 1323 ----SKFCEEDIDQILLR 1336
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/555 (42%), Positives = 317/555 (57%), Gaps = 51/555 (9%)
Query: 187 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 246
G +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+LVIAP
Sbjct: 752 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAP 811
Query: 247 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----------PRAIGPKFPIVV 296
LST++NW E + ++ I+YHGS R I++ M P A KF ++
Sbjct: 812 LSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAY--KFDALI 868
Query: 297 TSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNN 356
T++E+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN
Sbjct: 869 TTFEMVLSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNT 927
Query: 357 LAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 416
+ EL+SLLHF+ P FSS EF F G +E + V KL AIL+P
Sbjct: 928 VEELFSLLHFLEPTQFSSEAEFLKDF---GDLKTE------------EQVQKLQAILKPM 972
Query: 417 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 476
+LRR+K DVE+ L K+E I+ +T N Q LE + A + L
Sbjct: 973 MLRRLKEDVEKNLAPKQETIIEVELT----NIQKKYYRAILEKNFSFLTKGASQSNTPNL 1028
Query: 477 NNLMVQLRKNCNHPDLLESA-------FSDSC-FYPP---VEQIVEQCGKFRLLDRLLAR 525
N M++LRK CNHP L+ A F ++ PP V+ +V GK L+D+LL +
Sbjct: 1029 LNTMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPK 1088
Query: 526 LFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 585
L A HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +
Sbjct: 1089 LRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFV 1148
Query: 586 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 645
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E
Sbjct: 1149 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYE 1208
Query: 646 GRILKRAFSKLKLEHVVIG--KGQFHQERTKSNCIDALEEEDLL-----ALLQDEETAED 698
+ +A KL L+ V+ G+ + E EDLL A + DE+
Sbjct: 1209 REMFDKASLKLGLDKAVLQSMSGRDNHLSGPIQQFTKKEIEDLLRKGAYAAIMDEDDEGS 1268
Query: 699 KMIQTDIGEEDLERV 713
K + DI + L R
Sbjct: 1269 KFCEEDIDQILLRRT 1283
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/559 (42%), Positives = 321/559 (57%), Gaps = 60/559 (10%)
Query: 187 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 246
G +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IA L+ + G+ P+++IAP
Sbjct: 844 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAP 903
Query: 247 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----------PRAIGPKFPIVV 296
LST++NW E S + ++AI+YHGS R I++ M P A KF ++
Sbjct: 904 LSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAY--KFDALI 960
Query: 297 TSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNN 356
T++E+ LSD + LR +W+ +V+DE HRLKN CKLL LK + I +K+LLTGTPLQN
Sbjct: 961 TTFEMILSDCPE-LREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNT 1019
Query: 357 LAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 416
+ EL+SLLHF+ P F S EF F G +E + V KL +IL+P
Sbjct: 1020 VEELFSLLHFLEPAQFPSEIEFLREF---GDLKTE------------EQVQKLQSILKPM 1064
Query: 417 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 476
+LRR+K DVE+ L K+E I+ +T+ Q+ + ++ + S G +
Sbjct: 1065 MLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNF------SFLSMGATQNSNV 1118
Query: 477 NNL---MVQLRKNCNHPDLLESAFSDSC-----FYPPV------EQIVEQCGKFRLLDRL 522
NL M++LRK CNHP L+ A Y P+ + +V GK LLD+L
Sbjct: 1119 PNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDKL 1178
Query: 523 LARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSS 582
L RL A HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S
Sbjct: 1179 LPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSD 1238
Query: 583 YRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQ 642
+FLL TRAGGLGINLTAADTC+++DSDWNPQ DLQA RCHRIGQ+K V VYRL T
Sbjct: 1239 RFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN 1298
Query: 643 SVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLL-----ALLQDEETAE 697
S E +L +A KL L+ V+ ++E + E EDLL A + DE
Sbjct: 1299 SYEREMLDKASLKLGLDRAVLQSMSGNKESSIQQ-FSKKEIEDLLRKGAYAAIMDENDEG 1357
Query: 698 DKMIQTDIGEEDLERVLDR 716
+ EED++++L R
Sbjct: 1358 SRFC-----EEDIDQILQR 1371
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 234/555 (42%), Positives = 319/555 (57%), Gaps = 56/555 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1027
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI--GPKFPIVVTSYE 300
T+ NW E + ++ ++YHGS+ R I+ M R I KF ++T++E
Sbjct: 1028 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1086
Query: 301 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 360
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1087 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1145
Query: 361 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 420
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1146 FSLLHFLEPGRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1190
Query: 421 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN--N 478
+K DVE+ L K+E I+ +T Q+ + ++ K S G G N N
Sbjct: 1191 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF------AFLSKGGGQANVPNLLN 1244
Query: 479 LMVQLRKNCNHPDLL------------ESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARL 526
M++LRK CNHP L+ E+ +DS + ++ +++ GK L+D+LL +L
Sbjct: 1245 TMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQ-LQAMIQAAGKLVLIDKLLPKL 1303
Query: 527 FARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 586
A H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +F
Sbjct: 1304 KAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVF 1363
Query: 587 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 646
LL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E
Sbjct: 1364 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYER 1423
Query: 647 RILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDAL---EEEDLL-----ALLQDEETAED 698
+ +A KL L+ V+ + T N + L E EDLL L DEE
Sbjct: 1424 EMFDKASLKLGLDKAVLQSMSGRENAT--NGVQQLSKKEIEDLLRKGAYGALMDEEDEGS 1481
Query: 699 KMIQTDIGEEDLERV 713
K + DI + L R
Sbjct: 1482 KFCEEDIDQILLRRT 1496
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/555 (41%), Positives = 321/555 (57%), Gaps = 56/555 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLS 519
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM--------PRAIGPKFPIVVTSYE 300
T++NW E + ++AI+YHGS+ R I++ M P + KF +V+T++E
Sbjct: 520 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 301 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 360
+ L+D + L+ +W +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 579 MILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 361 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 420
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 638 FSLLNFLEPSQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 682
Query: 421 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 480
+K DVE+ L K+E I+ +T N Q LE + A + L N M
Sbjct: 683 LKDDVEKNLAPKQETIIEVELT----NIQKKYYRAILEKNFSFLTKGANQHNMPNLINTM 738
Query: 481 VQLRKNCNHPDLLESA-----------FSDSCFYPPVEQIVEQCGKFRLLDRLLARLFAR 529
++LRK CNHP L+ A S ++ +++ GK L+D+LL +L A
Sbjct: 739 MELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 798
Query: 530 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 589
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 799 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 858
Query: 590 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 649
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 859 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 918
Query: 650 KRAFSKLKLEHVVIGKGQFHQERTKSNCIDAL---EEEDLL-----ALLQDEETAEDKMI 701
+A KL L+ V+ Q + +N + L E EDLL L DEE K
Sbjct: 919 DKASLKLGLDKAVL---QDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFC 975
Query: 702 QTDIGEEDLERVLDR 716
EED++++L R
Sbjct: 976 -----EEDIDQILQR 985
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/555 (41%), Positives = 319/555 (57%), Gaps = 56/555 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1016
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI--GPKFPIVVTSYE 300
T+ NW E + ++ ++YHGS+ R I+ M R I KF ++T++E
Sbjct: 1017 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1075
Query: 301 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 360
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1076 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1134
Query: 361 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 420
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1135 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1179
Query: 421 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN--N 478
+K DVE+ L K+E I+ +T Q+ + ++ K S G G N N
Sbjct: 1180 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF------TFLSKGGGQANVPNLLN 1233
Query: 479 LMVQLRKNCNHPDLL------------ESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARL 526
M++LRK CNHP L+ E+ ++S + ++ +++ GK L+D+LL +L
Sbjct: 1234 TMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQ-LQAMIQAAGKLVLIDKLLPKL 1292
Query: 527 FARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 586
A H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +F
Sbjct: 1293 KAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1352
Query: 587 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 646
LL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E
Sbjct: 1353 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYER 1412
Query: 647 RILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDAL---EEEDLL-----ALLQDEETAED 698
+ +A KL L+ V+ + T N + L E EDLL L DEE
Sbjct: 1413 EMFDKASLKLGLDKAVLQSMSGRENAT--NGVQQLSKKEIEDLLRKGAYGALMDEEDEGS 1470
Query: 699 KMIQTDIGEEDLERV 713
K + DI + L R
Sbjct: 1471 KFCEEDIDQILLRRT 1485
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/555 (41%), Positives = 319/555 (57%), Gaps = 56/555 (10%)
Query: 189 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 248
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1026
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI--GPKFPIVVTSYE 300
T+ NW E + ++ ++YHGS+ R I+ M R I KF ++T++E
Sbjct: 1027 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1085
Query: 301 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 360
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1086 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1144
Query: 361 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 420
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1145 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1189
Query: 421 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN--N 478
+K DVE+ L K+E I+ +T Q+ + ++ K S G G N N
Sbjct: 1190 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF------TFLSKGGGQANVPNLLN 1243
Query: 479 LMVQLRKNCNHPDLL------------ESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARL 526
M++LRK CNHP L+ E+ ++S + ++ +++ GK L+D+LL +L
Sbjct: 1244 TMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQ-LQAMIQAAGKLVLIDKLLPKL 1302
Query: 527 FARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 586
A H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +F
Sbjct: 1303 KAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVF 1362
Query: 587 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 646
LL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E
Sbjct: 1363 LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYER 1422
Query: 647 RILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDAL---EEEDLL-----ALLQDEETAED 698
+ +A KL L+ V+ + T N + L E EDLL L DEE
Sbjct: 1423 EMFDKASLKLGLDKAVLQSMSGRENAT--NGVQQLSKKEIEDLLRKGAYGALMDEEDEGS 1480
Query: 699 KMIQTDIGEEDLERV 713
K + DI + L R
Sbjct: 1481 KFCEEDIDQILLRRT 1495
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/552 (40%), Positives = 335/552 (60%), Gaps = 38/552 (6%)
Query: 166 ENLSEEERVDKEQRELVSLLTGG-KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 224
+N+ E+++ + + +L G L+ YQL GVKWL +N IL D+MGLGKT Q
Sbjct: 10 DNIPEKDKSELTENDLKKWGLGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQ 69
Query: 225 TIAFLAHLKGN-GLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKH 283
TI+ LA+ +G+ ++GP+LV+ PL+ L NW E+ RF PS+S I Y G K++R E+++
Sbjct: 70 TISLLAYARGSLKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNL 129
Query: 284 MPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIG 343
P+F +++T+YE+ L DAR YL+ + WK LVVDE HRLKN + L + LK +G
Sbjct: 130 KS---DPRFHVLLTTYEMCLKDAR-YLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVG 185
Query: 344 NKLLLTGTPLQNNLAELWSLLHFILPDIF--SSLEEFQSWFDLSGKCNSEVMKEELEEKR 401
++LLTGTP+QNNL E++SLL FI P +F ++E+F + + +++ E
Sbjct: 186 FRVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAY-------ADIQTEP----- 233
Query: 402 RGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL 461
+V +LH +L+PFLLRR+K++V LP+K E++++ ++ Q+ + ++ + L+
Sbjct: 234 --ALVDELHQVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLD--- 288
Query: 462 REKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDR 521
F + K +L N+++QLRK +HP L + + + E +VE GK LLD
Sbjct: 289 ---AFRTDQSTKTRLLNVLMQLRKCVDHPYLFDGVEPEP--FEMGEHLVEASGKLSLLDS 343
Query: 522 LLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 581
+LA L H VL+FSQ T++LDI++ Y +GY R+DGSVR +ER I++F+
Sbjct: 344 MLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFS--TK 401
Query: 582 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 641
IFLLST+AGG+G+NLTAADT I D D+NPQ DLQA R HRIGQT+PV V RL
Sbjct: 402 DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGR 461
Query: 642 QSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLL-----ALLQDEETA 696
++E I RA SKL+L VI +G+F + L+ ++L LL EE++
Sbjct: 462 DTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLSSEESS 521
Query: 697 -EDKMIQTDIGE 707
+D +Q +G+
Sbjct: 522 VQDVDLQLILGQ 533
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/552 (40%), Positives = 316/552 (57%), Gaps = 47/552 (8%)
Query: 186 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 244
G KL +Q++GV WL W G+ ILAD+MGLGKTIQT+ FL L G GP+L+
Sbjct: 263 AGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLIS 322
Query: 245 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP-----------RAIGPKFP 293
PLSTL+NW E+ + P + + Y G K R IR+ + KF
Sbjct: 323 VPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFN 382
Query: 294 IVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPL 353
+++TSYE DA +L +W LVVDE HRL++ + K + L IG KLLLTGTPL
Sbjct: 383 VMLTSYEFISVDA-AFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPL 441
Query: 354 QNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAIL 413
QNNL EL+ LL+F+ F+ L+ FQ+ F ++V KEE V +LH IL
Sbjct: 442 QNNLEELFHLLNFLSSGKFNDLQTFQAEF-------TDVSKEE--------QVKRLHEIL 486
Query: 414 RPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMK 473
P +LRR+K+DV + +P K E I+ ++ Q+ F H++ K + L +K G G
Sbjct: 487 EPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKA-LNQK----GGGRV 541
Query: 474 GKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP----VEQIVEQCGKFRLLDRLLARLFAR 529
L N+M+ LRK CNHP L SA ++ P + + + GK LL ++L +L A
Sbjct: 542 CSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKAD 601
Query: 530 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 589
NH+VL+FSQ TK+L+++E++ +GY+ RIDGS++ D R++ I FND S + +FLLS
Sbjct: 602 NHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLS 661
Query: 590 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 649
TRAGGLGINL ADT I++DSDWNP D+QA R HR+GQ K V +YR T SVE RI+
Sbjct: 662 TRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIM 721
Query: 650 KRAFSKLKLEHVVI--GKGQFHQERTKSNCIDALE--EEDLL------ALLQDEETAEDK 699
+ A K+ L H+V+ G G +K D L EDL A+ D++ D
Sbjct: 722 QVAKHKMMLTHLVVRPGMGGMTTNFSKDELEDILRFGTEDLFKDGKSEAIHYDDKAVADL 781
Query: 700 MIQTDIGEEDLE 711
+ +T+ G E+ E
Sbjct: 782 LDRTNRGIEEKE 793
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/560 (40%), Positives = 318/560 (56%), Gaps = 61/560 (10%)
Query: 187 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 246
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 856 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 915
Query: 247 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI--GPKFPIVVTS 298
LST++NW E + ++ ++YHGS R I++ M R I +F ++T+
Sbjct: 916 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 974
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 358
+E+ L + L +W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 975 FEMILGGCGE-LNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1033
Query: 359 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1034 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1078
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN- 477
RR+K DVE+ L K+E I+ +T Q+ + ++ K S G G N
Sbjct: 1079 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFS------FLSKGAGQTNVPNL 1132
Query: 478 -NLMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKFRLLDRLL 523
N M++LRK CNHP L++ A F D+ Y P ++ +++ GK L+D+LL
Sbjct: 1133 VNTMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPSASDFHLQAMIQSAGKLVLIDKLL 1190
Query: 524 ARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 583
++ A HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S
Sbjct: 1191 PKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDR 1250
Query: 584 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 643
+FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S
Sbjct: 1251 FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNS 1310
Query: 644 VEGRILKRAFSKLKLEHVVIGKGQFH-------QERTKSNCIDALEEEDLLALLQDEETA 696
E + RA KL L+ V+ Q+ +K D L A++++E+
Sbjct: 1311 YEREMFDRASLKLGLDKAVLQSMSGRDSNVSGIQQLSKKEIEDLLRRGAYGAIMEEEDEG 1370
Query: 697 EDKMIQTDIGEEDLERVLDR 716
+ EED++++L R
Sbjct: 1371 ------SKFCEEDIDQILLR 1384
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 370 bits (949), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/565 (39%), Positives = 330/565 (58%), Gaps = 38/565 (6%)
Query: 185 LTGGKLKSYQLKGVKWLISLW--QNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPY 241
LTG L+SYQL+GV WL + QNG IL D+MGLGKT QTIA +L G GP+
Sbjct: 41 LTGIHLRSYQLEGVNWLAQRFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 98
Query: 242 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 301
L++ PLS LSNW E+ RF P +S + Y G K+ER +++ + +F +++T+YE+
Sbjct: 99 LILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQES---RFHVLLTTYEI 155
Query: 302 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 361
L DA +L+ + W LVVDE HRLKN L K L + LLLTGTP+QN+L EL+
Sbjct: 156 CLKDA-SFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELY 214
Query: 362 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 421
SLL F+ PD+FS E + ++ + ++ + ++LH +L+PFLLRR+
Sbjct: 215 SLLSFVEPDLFSKEE------------VGDFIQRYQDIEKESESASELHKLLQPFLLRRV 262
Query: 422 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMV 481
K++V LP+K E+++Y M+ Q+ + ++ K L+ F K KL N++
Sbjct: 263 KAEVATELPKKTEVVIYHGMSALQKKYYKAILMKDLD------AFENETAKKVKLQNILS 316
Query: 482 QLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTK 541
QLRK +HP L + + + + + E GK LLD+LLA L++ H+VL+FSQ T+
Sbjct: 317 QLRKCVDHPYLFDGVEPEP--FEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQ 374
Query: 542 ILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTA 601
+LDI++ Y + +GY R+DGSVR +ER I++F +FLLSTRAGG+G+NLTA
Sbjct: 375 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG--QQPIFVFLLSTRAGGVGMNLTA 432
Query: 602 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHV 661
ADT I DSD+NPQ DLQA R HRIGQ K V V RL +VE + ++A SKL+L ++
Sbjct: 433 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 492
Query: 662 VIGKGQFHQERTKSNCIDALEEEDLL-----ALLQDEETAEDKM-IQTDIGE-EDLERVL 714
+I G F K L+ ++L LL E + D++ +++ +GE +D + V
Sbjct: 493 IIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVS 552
Query: 715 DRADLIAGCLDDEEKPNAAVYPLKG 739
D G D+E+ +Y +G
Sbjct: 553 DALPAAEGGSRDQEEGKNHMYLFEG 577
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/490 (43%), Positives = 299/490 (61%), Gaps = 37/490 (7%)
Query: 185 LTGGKLKSYQLKGVKWLISLW--QNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPY 241
LTG +L+SYQL+GV WL+ + QNG IL D+MGLGKT QTIA L +L G GP+
Sbjct: 35 LTGIRLRSYQLEGVNWLVQCFHCQNGC--ILGDEMGLGKTCQTIALLIYLVGRLNDEGPF 92
Query: 242 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 301
LV+ PLS LSNW E+ RF P +S + Y G K+ER +++ + F +++T+YE+
Sbjct: 93 LVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQES---GFHVLLTTYEI 149
Query: 302 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 361
L DA +L+ ++W L VDE HRLKN L + L +LLLTGTP+QN+L EL+
Sbjct: 150 CLKDA-SFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELY 208
Query: 362 SLLHFILPDIFS--SLEEF-QSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
SLL + PD+F +E+F Q + D+ + S ++LH +L+PFLL
Sbjct: 209 SLLCVVEPDLFCREQVEDFVQRYQDIEKESKS---------------ASELHRLLQPFLL 253
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 478
RR+K+ V LP+K E+++Y M+ Q+ + ++ K L+ F K KL N
Sbjct: 254 RRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKDLD------AFENETAKKVKLQN 307
Query: 479 LMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQ 538
++ QLRK +HP L + + + E ++E GK LLDRLLA L++ H+VL+FSQ
Sbjct: 308 ILTQLRKCVDHPYLFDGVEPEP--FEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQ 365
Query: 539 WTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGIN 598
T +LDI++ Y + +GY R+DGSVR +ER I++F N +FLLSTRAGG+G+N
Sbjct: 366 MTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMN 423
Query: 599 LTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKL 658
LTAADT I DSD+NPQ DLQA R HRIGQ K V V RL +VE + ++A SKL+L
Sbjct: 424 LTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQL 483
Query: 659 EHVVIGKGQF 668
++VI G F
Sbjct: 484 TNMVIEGGHF 493
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/560 (40%), Positives = 317/560 (56%), Gaps = 61/560 (10%)
Query: 187 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 246
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 857 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 916
Query: 247 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI--GPKFPIVVTS 298
LST++NW E + ++ ++YHGS R I++ M R I +F ++T+
Sbjct: 917 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 975
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 358
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 976 FEMILGGCGE-LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1034
Query: 359 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1035 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1079
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN- 477
RR+K DVE+ L K+E I+ +T Q+ + ++ K S G G N
Sbjct: 1080 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFS------FLSKGAGQTNVPNL 1133
Query: 478 -NLMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKFRLLDRLL 523
N M++LRK CNHP L++ A F D+ Y P ++ +++ GK L+D+LL
Sbjct: 1134 VNTMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPAASDFHLQAMIQSAGKLVLIDKLL 1191
Query: 524 ARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 583
++ A HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S
Sbjct: 1192 PKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDR 1251
Query: 584 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 643
+FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S
Sbjct: 1252 FVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNS 1311
Query: 644 VEGRILKRAFSKLKLEHVVIGKGQFH-------QERTKSNCIDALEEEDLLALLQDEETA 696
E + RA KL L+ V+ Q+ +K D L A++++E+
Sbjct: 1312 YEREMFDRASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEG 1371
Query: 697 EDKMIQTDIGEEDLERVLDR 716
+ EED++++L R
Sbjct: 1372 ------SKFCEEDIDQILLR 1385
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 237/575 (41%), Positives = 331/575 (57%), Gaps = 70/575 (12%)
Query: 176 KEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KG 234
KEQ E V + L+ YQ+ G+ WLI W + ILAD+MGLGKTIQTI FL +L K
Sbjct: 191 KEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKS 250
Query: 235 NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP--KF 292
L+GP+L + PLST++ W E ++ P ++ + Y G RD IR+ + KF
Sbjct: 251 QHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRLKF 310
Query: 293 PIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTP 352
++T+YE+ L D R++LR ++W L+VDE HRLKN L K LK ++LL+TGTP
Sbjct: 311 NAILTTYEILLKD-RQFLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTP 369
Query: 353 LQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAI 412
LQN+L ELW+LLHFI+P F S E+F E+ E + KLH
Sbjct: 370 LQNSLKELWALLHFIMPYKFESWEDF----------------EKDHEDAATKGYEKLHKQ 413
Query: 413 LRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR-G 471
L PF+LRR K DVE+ LP K E IL MT Q+ + ++ K +SA R G
Sbjct: 414 LEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKN---------YSALRKG 464
Query: 472 MKGKLN---NLMVQLRKNCNH-----PDLLES----AFSDSCFYPPVEQIVEQCGKFRLL 519
+KG +N N++++L+K CNH P+ ES A SD+ VE+++ GK LL
Sbjct: 465 VKGSINTFINIVIELKKCCNHALLTKPEDFESRASLATSDA-----VEKLLRGSGKLLLL 519
Query: 520 DRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDV 579
D+LL RL H+VL+FSQ ++LDI+ Y + + R+DGS++ + RK+ + FN
Sbjct: 520 DKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAE 579
Query: 580 NSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLA 639
S FLLSTRAGGLGINL ADT I++DSDWNPQ DLQA R HRIGQ V++YRL
Sbjct: 580 GSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLV 639
Query: 640 TAQSVEGRILKRAFSKLKLEHVVI------GKGQFHQ-ERTKSNCIDALEEEDLLALLQ- 691
TA+SVE I++RA K+ L+H+VI GK ++ + + + + +EDL A+L+
Sbjct: 640 TARSVEEDIVERAKRKMVLDHLVIQRMDTTGKTVLNKRDASGTTANNPFNKEDLNAILKF 699
Query: 692 --------DEETAEDKMIQTDIGEEDLERVLDRAD 718
DEE ED + D++ +L RA+
Sbjct: 700 GAEELFKDDEENDEDPVC-------DIDEILQRAE 727
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/490 (42%), Positives = 298/490 (60%), Gaps = 37/490 (7%)
Query: 185 LTGGKLKSYQLKGVKWLISLW--QNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPY 241
LTG L+ YQL+GV WL + QNG IL D+MGLGKT QTIA +L G GP+
Sbjct: 43 LTGIHLRPYQLQGVNWLAQCFHCQNGC--ILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 100
Query: 242 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 301
L++ PLS LSNW E+ RF P +S + Y G K +R +++ + +F +++T+YE+
Sbjct: 101 LILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQES---RFHVLLTTYEI 157
Query: 302 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 361
L DA +L+ + W LVVDE HRLKN L K L + LLLTGTP+QN+L EL+
Sbjct: 158 CLKDA-SFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELY 216
Query: 362 SLLHFILPDIFS--SLEEF-QSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
SLL F+ PD+FS +E+F Q + D+ + S ++L+ +L+PFLL
Sbjct: 217 SLLSFVEPDLFSKEQVEDFVQRYQDIEKESES---------------ASELYKLLQPFLL 261
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 478
RR+K++V LPRK E+++Y M+ Q+ + ++ K L+ F K KL N
Sbjct: 262 RRVKAEVATELPRKTEVVIYHGMSALQKKYYKAILMKDLD------AFENETAKKVKLQN 315
Query: 479 LMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQ 538
++ QLRK +HP L + + + + ++E GK LLD+LLA L+++ H+VL+FSQ
Sbjct: 316 VLSQLRKCVDHPYLFDGVEPEP--FEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQ 373
Query: 539 WTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGIN 598
T++LDI++ Y + +GY R+DGSVR +ER I++F FLLSTRAGG+G+N
Sbjct: 374 MTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFG--QQPIFTFLLSTRAGGVGMN 431
Query: 599 LTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKL 658
LTAADT I +DSD+NPQ DLQA R HRIGQ K V V RL +VE + ++A SKL+L
Sbjct: 432 LTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQL 491
Query: 659 EHVVIGKGQF 668
+ +I G F
Sbjct: 492 TNTIIEGGHF 501
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/500 (40%), Positives = 297/500 (59%), Gaps = 39/500 (7%)
Query: 184 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYL 242
+ GG+L+ +QL G+ W+ LW G NGILAD+MGLGKT+QT+AF++ L +GP++
Sbjct: 370 FIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHI 429
Query: 243 VIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM---PRAIGPK---FPIVV 296
++ PLST+ W++ ++ P ++ I Y G++K RD IR PRA G K F +++
Sbjct: 430 IVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLL 489
Query: 297 TSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNN 356
T+YE L D R L W+++ VDE HRLKN + L + L + N++L+TGTPLQNN
Sbjct: 490 TTYEYILKD-RAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNN 548
Query: 357 LAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 416
+ EL +L++F++P F+ +E + E EE EE + LH ++PF
Sbjct: 549 IKELAALVNFLMPGRFTIDQE----------IDFENQDEEQEE-----YIHDLHRRIQPF 593
Query: 417 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG-RGMKGK 475
+LRR+K DVE+ LP K E IL +++ Q + +++ K +AG +G
Sbjct: 594 ILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYS------ALTAGAKGGHFS 647
Query: 476 LNNLMVQLRKNCNHPDLLESA-------FSDSCFYPP--VEQIVEQCGKFRLLDRLLARL 526
L N+M +L+K NHP L ++A F D + ++ GK LLD+LL RL
Sbjct: 648 LLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRL 707
Query: 527 FARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 586
H+VL+FSQ ++LDI+ Y + KG R+DG+V +R+ I FN +S+ +F
Sbjct: 708 KKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVF 767
Query: 587 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 646
LLSTRAGGLGINL ADT +++DSDWNPQ DLQAM R HRIGQ V VYRL + +VE
Sbjct: 768 LLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEE 827
Query: 647 RILKRAFSKLKLEHVVIGKG 666
+L+RA K+ LE+ +I G
Sbjct: 828 EVLERARKKMILEYAIISLG 847
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 363 bits (931), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 223/515 (43%), Positives = 308/515 (59%), Gaps = 38/515 (7%)
Query: 190 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLS 248
L+ YQL G+ WL W G + ILAD+MGLGKTIQTI+FL +L + L+GP+L++ PLS
Sbjct: 477 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 536
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM--PRAIGPKFPIVVTSYEVALSDA 306
TL++W EI + P ++A++Y G R+ IR P+ KF I++T+YE+ L D
Sbjct: 537 TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD- 595
Query: 307 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 366
+ +L NW ++ VDE HRLKN L K L ++LL+TGTPLQN+L ELWSLLHF
Sbjct: 596 KSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF 655
Query: 367 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 426
I+P+ FSS E+F EE K R A LH L PFLLRR+K DVE
Sbjct: 656 IMPEKFSSWEDF----------------EEEHGKGREYGYASLHKELEPFLLRRVKKDVE 699
Query: 427 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG-RGMKGKLNNLMVQLRK 485
+ LP K E IL M+ Q+ + ++ + K S G +G N+M++L+K
Sbjct: 700 KSLPAKVEQILRMEMSALQKQYYKWILTRNY------KALSKGSKGSTSGFLNIMMELKK 753
Query: 486 NCNHPDLLESAFSDSCFY---PPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKI 542
CNH L++ D+ FY ++ ++ GK LLD+LL RL R ++VL+FSQ ++
Sbjct: 754 CCNHCYLIKPP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRM 812
Query: 543 LDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAA 602
LDI+ Y + + R+DGS++ + RK+ + FN S FLLSTRAGGLGINL +A
Sbjct: 813 LDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASA 872
Query: 603 DTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVV 662
DT +++DSDWNPQ DLQA R HRIGQ K V++YRL T SVE IL+RA K+ L+H+V
Sbjct: 873 DTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLV 932
Query: 663 I------GKGQFHQERTKSNCIDALEEEDLLALLQ 691
I GK H T S+ +E+L A+L+
Sbjct: 933 IQRMDTTGKTVLHTGSTPSSST-PFNKEELSAILK 966
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 362 bits (929), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 206/519 (39%), Positives = 307/519 (59%), Gaps = 32/519 (6%)
Query: 183 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPY 241
S + GG+++ +QL G+ W+ LW NGILAD+MGLGKT+QT+ FL++L + HGP+
Sbjct: 383 SYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPF 442
Query: 242 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP---KFPIVVTS 298
L++ PLST+ W ++ + P +++I Y G+ + R IR + KF I++T+
Sbjct: 443 LIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTT 502
Query: 299 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 358
YE L D ++ L + W+YL +DE HRLKN + L + L N+LL+TGTPLQNNL
Sbjct: 503 YEYILKD-KQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLK 561
Query: 359 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 418
EL SL++F++P F +E FD + N+E ++ + L L+PF+L
Sbjct: 562 ELASLVNFLMPGKFYIRDELN--FD---QPNAEQERD----------IRDLQERLQPFIL 606
Query: 419 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 478
RR+K DVE+ LP K E IL +++ Q + +++ K N+ + GRG LN
Sbjct: 607 RRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTK---NYRALTGHTDGRGQLSLLN- 662
Query: 479 LMVQLRKNCNHPDLLESAFSDSCFYPPVEQ------IVEQCGKFRLLDRLLARLFARNHK 532
++V+L+K NHP L A + + I+ GK LLD+LL RL H+
Sbjct: 663 IVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHR 722
Query: 533 VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRA 592
VL+FSQ ++L+I+ Y + +GY R+DG++ R+ I FN +S +FLLSTRA
Sbjct: 723 VLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRA 782
Query: 593 GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRA 652
GGLGINL ADT I++DSDWNPQ DLQAM R HRIGQ V+VYR + +VE IL+RA
Sbjct: 783 GGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERA 842
Query: 653 FSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQ 691
K+ LE+ +I G E++K++ D + ++L A+L+
Sbjct: 843 RRKMILEYAIISLGV--TEKSKNSKNDKYDAQELSAILK 879
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 215/534 (40%), Positives = 296/534 (55%), Gaps = 46/534 (8%)
Query: 186 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 244
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G GPYLV
Sbjct: 696 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVS 755
Query: 245 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRK----------------HMPRAI 288
APLST+ NW E + P + Y G K+ R IR M + +
Sbjct: 756 APLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEV 815
Query: 289 GPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 348
KF +++TSYE+ D + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 816 QIKFHVLLTSYELITID-QAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 874
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 875 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 919
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E + S
Sbjct: 920 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFE-----ALNSK 974
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKFRLLDRLLA 524
G G + L N+M+ L+K CNHP L A ++ P +V+ GK LL ++L
Sbjct: 975 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 1034
Query: 525 RLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 584
+L H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 1035 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1094
Query: 585 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 644
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1095 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1154
Query: 645 EGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEETAED 698
E RI + A K+ L H+V+ G +KS + E +D+L +E +D
Sbjct: 1155 EERITQVAKRKMMLTHLVVRPGL----GSKSGSMTKQELDDILKFGTEELFKDD 1204
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 359 bits (921), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 222/567 (39%), Positives = 323/567 (56%), Gaps = 57/567 (10%)
Query: 176 KEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KG 234
K Q E +S +G L+ YQ+ G+ WL+ W + ILAD+MGLGKTIQTI FL L K
Sbjct: 516 KNQPEFLS--SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKI 573
Query: 235 NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRK--HMPRAIGPKF 292
+ L+GP+L + PLST++ W E + P ++ + Y G K R+ I++ + KF
Sbjct: 574 HHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESSKRLKF 633
Query: 293 PIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTP 352
++T+YE+ L D +++L W L+VDE HRLKN L K LK ++LL+TGTP
Sbjct: 634 NCILTTYEIVLKD-KQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTP 692
Query: 353 LQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAI 412
LQN+L ELW+LLHFI+PD F + E F EV E+K +LH
Sbjct: 693 LQNSLKELWALLHFIMPDKFDTWENF------------EVQHGNAEDK----GYTRLHQQ 736
Query: 413 LRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGM 472
L P++LRR+K DVE+ LP K E IL MT Q+ + ++ K + + K RG
Sbjct: 737 LEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGK-----RGS 791
Query: 473 KGKLNNLMVQLRKNCNHPDLLE-SAF------SDSCFYPPVEQIVEQCGKFRLLDRLLAR 525
N++++L+K CNH L+ S F D ++ +++ GK LLD+LL R
Sbjct: 792 TSTFLNIVIELKKCCNHAALIRPSEFELMGLQQDEA----LQTLLKGSGKLVLLDKLLCR 847
Query: 526 LFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 585
L H+VL+FSQ ++LD++ Y ++ + R+DGS++ + R++ + FN S
Sbjct: 848 LKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFC 907
Query: 586 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 645
FLLSTRAGGLGINL ADT I++DSDWNPQ DLQA R HRIGQ V++YRL TA+SVE
Sbjct: 908 FLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVE 967
Query: 646 GRILKRAFSKLKLEHVVIGK------------GQFHQERTKSNCIDALEEEDLLALLQ-- 691
+I++RA K+ L+H+VI + G H S+ + ++DL A+L+
Sbjct: 968 EQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGH-----SSNSNPFNKDDLSAILKFG 1022
Query: 692 DEETAEDKMIQTDIGEEDLERVLDRAD 718
EE +D+ D D++ +L RA+
Sbjct: 1023 AEELFKDEQEHDDDLVCDIDEILRRAE 1049
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 359 bits (921), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 217/563 (38%), Positives = 320/563 (56%), Gaps = 65/563 (11%)
Query: 188 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPL 247
G L YQL+G+ +L W + ILAD+MGLGKTIQ+IA LA L L P+LVIAPL
Sbjct: 271 GLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI-PHLVIAPL 329
Query: 248 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM--------------------PRA 287
STL NW E + + P ++ ++Y G+ + R IR +
Sbjct: 330 STLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQ 389
Query: 288 IGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLL 347
KF +++TSYE+ D+ L+ W+ ++VDEGHRLKN KL L +++L
Sbjct: 390 KRIKFDVLLTSYEMINLDS-AVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRIL 448
Query: 348 LTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVA 407
LTGTPLQNNL EL+ L+HF+ F SLEEFQ EE ++ + + ++
Sbjct: 449 LTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQ---------------EEFKDINQEEQIS 493
Query: 408 KLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFS 467
+LH +L P LLRR+K DV + +P KKE+IL ++ Q+ + + + + V +
Sbjct: 494 RLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQ------VLT 547
Query: 468 AGRGMKGKLNNLMVQLRKNCNHPDLLESA---FSDSCFYPPVEQIVEQCGKFRLLDRLLA 524
G + LNN+M++LRK C HP +LE D+ +Q++E CGK +LLD+++
Sbjct: 548 KKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDAN--EAFKQLLESCGKLQLLDKMMV 605
Query: 525 RLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 584
+L + H+VL+++Q+ +LD++E Y K ++ RIDG V ER+ +I FN NS+
Sbjct: 606 KLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKF 665
Query: 585 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 644
FLLSTRAGGLGINL ADT I+YDSDWNP DLQAM R HR+GQT V +YRL ++
Sbjct: 666 CFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTI 725
Query: 645 EGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDL-------LALLQDEETAE 697
E R+++ K+ LEH+V+GK K+ I+ E +D+ L +D+E +
Sbjct: 726 EERMMQLTKKKMVLEHLVVGK-------LKTQNINQEELDDIIRYGSKELFASEDDEAGK 778
Query: 698 DKMIQTDIGEEDLERVLDRADLI 720
I D + ++++LDR DL+
Sbjct: 779 SGKIHYD--DAAIDKLLDR-DLV 798
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 359 bits (921), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 308/560 (55%), Gaps = 54/560 (9%)
Query: 186 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 244
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 732 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 791
Query: 245 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKH----------------MPRAI 288
APLST+ NW E + P + Y G K R IR M R
Sbjct: 792 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 851
Query: 289 GPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 348
KF +++TSYE+ D + L W LVVDE HRLKN + K + L I +KLLL
Sbjct: 852 QVKFHVLLTSYELITID-QAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLL 910
Query: 349 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 408
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 911 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 955
Query: 409 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 468
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S
Sbjct: 956 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSR 1010
Query: 469 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVE----QIVEQCGKFRLLDRLLA 524
G G + L N+M+ L+K CNHP L A +S P +++ GK LL ++L
Sbjct: 1011 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLR 1070
Query: 525 RLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 584
+L + H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1071 KLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQF 1130
Query: 585 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 644
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SV
Sbjct: 1131 CFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASV 1190
Query: 645 EGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLA-----LLQDEETAEDK 699
E RI + A K+ L H+V+ G +K+ + E +D+L L +DE E+K
Sbjct: 1191 EERITQVAKRKMMLTHLVVRPGL----GSKAGSMSKQELDDILKFGTEELFKDENEGENK 1246
Query: 700 MIQTDI---GEEDLERVLDR 716
+ + E + R+LDR
Sbjct: 1247 EEDSSVIHYDNEAIARLLDR 1266
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 299/523 (57%), Gaps = 54/523 (10%)
Query: 190 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLS 248
L+ YQL+G+ WL W + ILAD+MGLGKTIQTI+FL++L + L+GP+L++ PLS
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 249 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP--KFPIVVTSYEVALSDA 306
TL++W E + P ++ ++Y G R+ IR + KF ++T+YE+ L D
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKD- 602
Query: 307 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 366
+ L NW +L VDE HRLKN L K L ++LL+TGTPLQN+L ELWSLLHF
Sbjct: 603 KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF 662
Query: 367 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 426
I+P+ F E+F EE K R LH +L PFLLRR+K DVE
Sbjct: 663 IMPEKFEFWEDF----------------EEDHGKGRENGYQSLHKVLEPFLLRRVKKDVE 706
Query: 427 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG-RGMKGKLNNLMVQLRK 485
+ LP K E IL M+ Q+ + ++ + K + G RG N++++L+K
Sbjct: 707 KSLPAKVEQILRVEMSALQKQYYKWILTRNY------KALAKGTRGSTSGFLNIVMELKK 760
Query: 486 NCNHPDLLESAFSDSCFYPPVE-----------QIVEQCGKFRLLDRLLARLFARNHKVL 534
CNH L++ PP E ++ GK LLD+LL RL R ++VL
Sbjct: 761 CCNHCYLIK---------PPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVL 811
Query: 535 VFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGG 594
+FSQ ++LDI+ Y K Y R+DGS++ + RK+ + FN S FLLSTRAGG
Sbjct: 812 IFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGG 871
Query: 595 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFS 654
LGINL +ADT +++DSDWNPQ DLQA R HRIGQ K V++YRL T +VE I++RA
Sbjct: 872 LGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKK 931
Query: 655 KLKLEHVVI------GKGQFHQERTKSNCIDALEEEDLLALLQ 691
K+ L+H+VI G+ +SN + +E+L A+L+
Sbjct: 932 KMVLDHLVIQRMDTTGRTILENNSGRSNS-NPFNKEELTAILK 973
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 281,614,800
Number of Sequences: 539616
Number of extensions: 12333844
Number of successful extensions: 53329
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 49386
Number of HSP's gapped (non-prelim): 2863
length of query: 759
length of database: 191,569,459
effective HSP length: 125
effective length of query: 634
effective length of database: 124,117,459
effective search space: 78690469006
effective search space used: 78690469006
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)