BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004360
(759 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48626|ZW10_ARATH Centromere/kinetochore protein zw10 homolog OS=Arabidopsis thaliana
GN=ZW10 PE=2 SV=1
Length = 742
Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/757 (64%), Positives = 615/757 (81%), Gaps = 20/757 (2%)
Query: 1 MEELFDTINVRDLLSTHDLTDQTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDF 60
++ LF++INVRDLL+ HDL D T PL+APDLRLLI+RLE HSL+IKSKVQSY+ +HH DF
Sbjct: 4 IDALFESINVRDLLAGHDLNDPTTPLSAPDLRLLINRLESHSLRIKSKVQSYLVAHHSDF 63
Query: 61 ASLFSLCNDTVSRTDEISTDLSDILGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLEL 120
+ LFSLC DTVSRT IS D+SD+L L+S RPID E++ ++DE++ K KE ++K+E L+L
Sbjct: 64 SELFSLCQDTVSRTRLISDDVSDVLQLVSDRPIDVEIRSVVDEITEKTKEVKLKRESLDL 123
Query: 121 VRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVC 180
V AIV I E L+ KEAL++GR RFAAE +RELK LR+G+E EP+ Y LLRKEW C
Sbjct: 124 VNAIVGICEALQETKEALKNGRFRFAAERIRELKVVLRIGEEEDGEPVAYALLRKEWSNC 183
Query: 181 FEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAK 240
F+EIQE+L KF+E+AVRFE +S+R+ +KYQL+V GI L TVLEAMEV+GILDYGLAK
Sbjct: 184 FDEIQEVLAKFMENAVRFELDSSRIRIKYQLSVGETAGIALSTVLEAMEVIGILDYGLAK 243
Query: 241 VADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGI 300
AD K+VI+PAV++ S VE+L +++EA LR+ S D K E+VDG +YSGI
Sbjct: 244 AADSIFKHVITPAVTHASTFAAVEDLCKSAGEVTEATLRLEQSSDHKFEDVDGDAMYSGI 303
Query: 301 IQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKIIDHT 360
++VVKFI +C N +W+ FGRLTWPRISELIIS FLSKVVPEDASKLADFQKII+ T
Sbjct: 304 LKVVKFICSSLCFGNVTWIHSFGRLTWPRISELIISKFLSKVVPEDASKLADFQKIIERT 363
Query: 361 SEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQCDFAVPQE 420
S+FEAALKE+ F+S+SD ++RLS +AE+VEVHFASRKK EILAKARNLLLQC+F +PQ+
Sbjct: 364 SQFEAALKELNFVSSSD-AESRLSKYAEDVEVHFASRKKIEILAKARNLLLQCNFTIPQD 422
Query: 421 STGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAF 480
+A+ +++H+V LLF SERCVV++AASQLM LVH+ L+D+C+SS RVA
Sbjct: 423 ------------IAMRNAKHIVCLLFSSERCVVSEAASQLMNLVHKTLEDVCVSSARVAS 470
Query: 481 EFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSS 540
EFY+AARD+ILLYEA+VPVKLE+QL+G+N+ AVL+HNDCLYL +EILG AFEY + FPSS
Sbjct: 471 EFYNAARDSILLYEAVVPVKLEKQLDGLNEAAVLLHNDCLYLFEEILGLAFEYRASFPSS 530
Query: 541 IKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIE 600
IKE+AVFAD+APRF LMAEE+LQ+Q+ +VI +LREA+D ADGFQNTHQI+QF+SA+FSI+
Sbjct: 531 IKEYAVFADIAPRFKLMAEEVLQKQVHLVISSLREAIDSADGFQNTHQIKQFKSAEFSID 590
Query: 601 QVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIH 660
QVVF L+ VH+IWEP+L P TY +SMC VLESVF RI RDILLLDDMAA+ET +LQ+LI+
Sbjct: 591 QVVFSLKNVHMIWEPVLRPKTYKQSMCAVLESVFRRIARDILLLDDMAADETFELQKLIY 650
Query: 661 LMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWES 720
LML+NLSS+L+S+ + ++ +RPLDD+IPSL K RKLAELLDMPL SIT+AWES
Sbjct: 651 LMLKNLSSVLDSVRSADET-------SRPLDDIIPSLRKTRKLAELLDMPLMSITSAWES 703
Query: 721 GELLSCGFTLSEIEDFIKAIFADSTLRKECLWRIENV 757
GEL C FT +E++DFIKAIF DS LRKECLWRI+ V
Sbjct: 704 GELFRCNFTRTEVQDFIKAIFTDSPLRKECLWRIDEV 740
>sp|Q5RFM4|ZW10_PONAB Centromere/kinetochore protein zw10 homolog OS=Pongo abelii GN=ZW10
PE=2 SV=3
Length = 779
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 183/781 (23%), Positives = 348/781 (44%), Gaps = 75/781 (9%)
Query: 30 DLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLIS 89
DL ISRL +IK +V + I+ + +F +++ D++S D+ L+
Sbjct: 19 DLGARISRLTRRVEEIKGEVCNMISKKYSEFLPSMQSAQGLITQVDKLSEDID----LLK 74
Query: 90 YRPIDKEVKEIIDEVSAKMKEARVKKE----LLELVRAIVEIGERLKGVKEALRDGRLRF 145
R I+ EV+ + + + + + + E +L L++ + E ++ AL + +
Sbjct: 75 SR-IESEVRRDLHVSTGEFTDLKQQLERDSIVLSLLKQLQEFSTAIEEYNCALTEKKYVT 133
Query: 146 AAEELRELKKDLRVGDENASEPL-VYGLLRKEWLV--------CFEEIQELLV-KFVESA 195
A+ L E +K L++ L + L E + EE Q+L+V KF S
Sbjct: 134 GAQRLEEAQKCLKLLKSRKCFDLKILKFLSMELTIQKQNILYHLGEEWQKLIVWKFSPSK 193
Query: 196 VRFEKESNRVLVKYQLTVDGLDGIE------LRTVLEAMEVVGILDYGLAKVADLKIKYV 249
ES + + L + E + +VL A V+G L L + +KY+
Sbjct: 194 DTSSLES-YLQTELHLYTEQSHKEEKTPMPPISSVLLAFSVLGELHSKLKSFGQMLLKYI 252
Query: 250 ISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHK 309
+ P S S L+ E ++ S+ +E +++ I V++ + K
Sbjct: 253 LRPLASCPS-------LHAVIESQPNIVIIRFESIMTNLEYPSPSEVFTKIRLVLEVLQK 305
Query: 310 RICL---------QNGSWV---RCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKII 357
++ + S V G + W +SE +I N L +P ++SKL +++II
Sbjct: 306 QLLDLPLDTDLENEKTSTVPLAEMLGDMIWEDLSEYLIKNCLVYSIPTNSSKLQQYEEII 365
Query: 358 DHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQ----- 412
T EFE ALKEM F+ D D L +A N+ HFA++K +++ ARNL+
Sbjct: 366 QSTEEFENALKEMRFLKG-DTTD--LLKYARNINSHFANKKCQDVIVAARNLMTSEIHNT 422
Query: 413 ------CDFAVPQEST----GKDPICK------NDGMAVDSSEHVVDLLFMSERCVVTKA 456
VP+ T K + K N+ M ++ + F C ++++
Sbjct: 423 VKIIPDSKINVPELPTPDEDNKLEVQKVSNTQYNEVMNLEPENTLDQHSFSLPTCRISES 482
Query: 457 ASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMH 516
+LM+L +Q L + SS + A + +++ R+ L+ +VP + L+ + Q+A + H
Sbjct: 483 VKKLMELAYQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTYHKENLQKLPQLAAIHH 542
Query: 517 NDCLYLSQEILGFAFEYHSDF-PSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLRE 575
N+C+Y++ +L ++ P A F D+ P F + E Q++ L E
Sbjct: 543 NNCMYIAHHLLTLGHQFRLRLAPILCDGTATFVDLVPGFRRLGTECFLAQMRAQKGELLE 602
Query: 576 ALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFS 635
L A F N + + +A ++ QV+ L+++ I+W+ +L + Y ++M T+L + S
Sbjct: 603 RLSSARNFSNMDDEENYSAASKAVRQVLHQLKRLGIVWQDVLPVNIYCKAMGTLLNTAIS 662
Query: 636 RITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIP 695
+ I L+D++ E+ +L L +++ + L+ ++ K + + +P
Sbjct: 663 EVIGKITALEDISTEDGDRLYSLCKTVMDEGPQVFAPLSEESKNKK----YQEEVPVYVP 718
Query: 696 SLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFADSTLRKECLWRI 754
F++L +L L+ I W G+ L+ F+ SE++ I+A+F ++ R L +I
Sbjct: 719 KWMPFKELMMMLQASLQEIGDRWADGKGPLAAAFSSSEVKALIRALFQNTERRAAALAKI 778
Query: 755 E 755
+
Sbjct: 779 K 779
>sp|O43264|ZW10_HUMAN Centromere/kinetochore protein zw10 homolog OS=Homo sapiens GN=ZW10
PE=1 SV=3
Length = 779
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 184/782 (23%), Positives = 354/782 (45%), Gaps = 77/782 (9%)
Query: 30 DLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDLSDILGLIS 89
DL ISRL +IK +V + I+ + +F +++ D++S D+ L+
Sbjct: 19 DLGTRISRLTRRVEEIKGEVCNMISKKYSEFLPSMQSAQGLITQVDKLSEDID----LLK 74
Query: 90 YRPIDKEVKEIIDEVSAKMKEARVKKE----LLELVRAIVEIGERLKGVKEALRDGRLRF 145
R I+ EV+ + + + + + + E +L L++ + E ++ AL + +
Sbjct: 75 SR-IESEVRRDLHVSTGEFTDLKQQLERDSVVLSLLKQLQEFSTAIEEYNCALTEKKYVT 133
Query: 146 AAEELRELKKDLRV------GDENASEPLVYGLLRKEWLVCF---EEIQELLV-KFVESA 195
A+ L E +K L++ D + L L ++ + + EE Q+L+V KF S
Sbjct: 134 GAQRLEEAQKCLKLLKSRKCFDLKILKSLSMELTIQKQNILYHLGEEWQKLIVWKFPPSK 193
Query: 196 VRFEKESNRVLVKYQLTVDGLDGIE------LRTVLEAMEVVGILDYGLAKVADLKIKYV 249
ES + + L + E + +VL A V+G L L + +KY+
Sbjct: 194 DTSSLES-YLQTELHLYTEQSHKEEKTPMPPISSVLLAFSVLGELHSKLKSFGQMLLKYI 252
Query: 250 ISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDGKTIYSGIIQVVKFIHK 309
+ P S S L+ E ++ S+ +E +++ I V++ + K
Sbjct: 253 LRPLASCPS-------LHAVIESQPNIVIIRFESIMTNLEYPSPSEVFTKIRLVLEVLQK 305
Query: 310 RICL---------QNGSWV---RCFGRLTWPRISELIISNFLSKVVPEDASKLADFQKII 357
++ + S V G + W +SE +I N L +P ++SKL +++II
Sbjct: 306 QLLDLPLDTDLENEKTSTVPLAEMLGDMIWEDLSECLIKNCLVYSIPTNSSKLQQYEEII 365
Query: 358 DHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLLLQ----- 412
T EFE ALKEM F+ D D L +A N+ HFA++K +++ ARNL+
Sbjct: 366 QSTEEFENALKEMRFLKG-DTTD--LLKYARNINSHFANKKCQDVIVAARNLMTSEIHNT 422
Query: 413 ------CDFAVPQESTGKDPICKNDGMAVDSSEH--VVDL---------LFMSERCVVTK 455
VP+ T D K + V ++++ V++L F C +++
Sbjct: 423 VKIIPDSKINVPELPT-PDEDNKLEVQKVSNTQYHEVMNLEPENTLDQHSFSLPTCRISE 481
Query: 456 AASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLM 515
+ +LM+L +Q L + SS + A + +++ R+ L+ +VP + L+ + Q+A +
Sbjct: 482 SVKKLMELAYQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTYHKENLQKLPQLAAIH 541
Query: 516 HNDCLYLSQEILGFAFEYHSDF-PSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLR 574
HN+C+Y++ +L ++ P A F D+ P F + E Q++ L
Sbjct: 542 HNNCMYIAHHLLTLGHQFRLRLAPILCDGTATFVDLVPGFRRLGTECFLAQMRAQKGELL 601
Query: 575 EALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVF 634
E L A F N + + +A ++ QV+ L+++ I+W+ +L + Y ++M T+L +
Sbjct: 602 ERLSSARNFSNMDDEENYSAASKAVRQVLHQLKRLGIVWQDVLPVNIYCKAMGTLLNTAI 661
Query: 635 SRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLI 694
S + I L+D++ E+ +L L +++ + L+ ++ K + + +
Sbjct: 662 SEVIGKITALEDISTEDGDRLYSLCKTVMDEGPQVFAPLSEESKNKK----YQEEVPVYV 717
Query: 695 PSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFADSTLRKECLWR 753
P F++L +L L+ I W G+ L+ F+ SE++ I+A+F ++ R L +
Sbjct: 718 PKWMPFKELMMMLQASLQEIGDRWADGKGPLAAAFSSSEVKALIRALFQNTERRAAALAK 777
Query: 754 IE 755
I+
Sbjct: 778 IK 779
>sp|Q4V8C2|ZW10_RAT Centromere/kinetochore protein zw10 homolog OS=Rattus norvegicus
GN=Zw10 PE=2 SV=3
Length = 777
Score = 174 bits (441), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 185/787 (23%), Positives = 340/787 (43%), Gaps = 73/787 (9%)
Query: 22 QTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDL 81
+ L DL ISRL +IK +V + I+ + +F V++ D +S D+
Sbjct: 11 HSGSLEKEDLGTRISRLTRRVEEIKGEVCNMISKKYSEFLPTMQSAQALVTQVDTLSNDI 70
Query: 82 SDILGLISYRPIDKEVKEIIDEVSAKMKEAR------VKKELLELVRAIVEIGERLKGVK 135
+ I ++ + K + R + K+L E AI E L K
Sbjct: 71 DQLKSRIETEVCRDLHISTVEFTNLKQRLERDSVVLNLLKQLQEFSSAIEEYNSAL-AEK 129
Query: 136 EALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVCF---EEIQELLV-KF 191
+ + RL A+E +L K + D + L L ++ + + E+ Q+L+V KF
Sbjct: 130 KYIPAARLLEEAQECLKLLKSKKCFDLKMLKSLSMELTVQKQNILYHLGEDWQKLVVWKF 189
Query: 192 VESAVRFEKES----NRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKVADLKIK 247
S ES L Q + + +VL A ++G L L + +K
Sbjct: 190 PPSKDTSSLESCLQTELHLCTEQPEKEMTPLPSISSVLLAFSILGELPTKLKSFGQMLLK 249
Query: 248 YVISPAVSYGSPITFVE-----------------ELNPGPEKMSEAILRMVPSVDDKIEN 290
Y++ P V+ S +E E P PE A +++V V K
Sbjct: 250 YILKPLVTCPSLHAVIERQPNSVSICFQSLATDSEHPPPPEAF--AKIQLVLEVLQKQLL 307
Query: 291 VDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKL 350
I +V + + + G + W +S+ +I N L +P ++SKL
Sbjct: 308 DLPLDADLEIGKVPEIVLAEM----------LGEVIWEDLSDCLIRNCLVYSIPTNSSKL 357
Query: 351 ADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLL 410
+++II T EFE +LKEM F+ D D L +A N+ HFA++K +++ AR+L+
Sbjct: 358 QQYEEIIQSTEEFEKSLKEMRFLKG-DTTD--LLKYARNINSHFANKKCQDVIVAARHLM 414
Query: 411 LQ-----------CDFAVPQ-ESTGKD-----PICK---NDGMAVDSSEHVVDLLFMSER 450
C+ +P S D +CK D ++ + F
Sbjct: 415 TSEIHNTVKIGPDCEETLPDLPSPDADHRLQVQVCKVQFTDAGNLEPETSLDPRSFSLPT 474
Query: 451 CVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQ 510
C +++A +LM+L +Q L + SS + A + +++ R+ L+ +VP + L+ + Q
Sbjct: 475 CRISEAVKKLMELAYQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTYHKENLQKLPQ 534
Query: 511 VAVLMHNDCLYLSQEILGFAFEYHSDF-PSSIKEHAVFADMAPRFHLMAEEILQRQIQIV 569
+A + HN+C+Y++ +L ++ S P F D+ P F + E Q++
Sbjct: 535 LAAIHHNNCMYIAHHLLTLGHQFRSRLTPILCDGTTTFVDLVPGFRRLGTECFLAQMRTQ 594
Query: 570 IFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRSMCTV 629
L E L A F N + + +A ++ QV+ L+++ I+W+ +L + Y ++M T+
Sbjct: 595 KGELLERLSSARSFANMDDEENYSAASKAVRQVLHQLKRLGIVWQDVLPVNIYCKAMGTL 654
Query: 630 LESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARP 689
L +V + + I L+D++ E+ +L L +++ + L+ N+ K + +
Sbjct: 655 LNTVIAEMIGRITALEDISTEDGDRLYSLCKTVMDEGPQVFAPLSDENKNKKYQEEVPVY 714
Query: 690 LDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFADSTLRK 748
+ +P F++L +L L+ I W G+ L+ F SE++ I+A+F ++ R
Sbjct: 715 VSKWMP----FKELMIMLQASLQEIGDRWADGKGPLATAFPSSEVKALIRALFQNTERRA 770
Query: 749 ECLWRIE 755
L +I+
Sbjct: 771 AALAKIK 777
>sp|O54692|ZW10_MOUSE Centromere/kinetochore protein zw10 homolog OS=Mus musculus GN=Zw10
PE=2 SV=3
Length = 779
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 180/797 (22%), Positives = 350/797 (43%), Gaps = 91/797 (11%)
Query: 22 QTAPLTAPDLRLLISRLEFHSLQIKSKVQSYIASHHQDFASLFSLCNDTVSRTDEISTDL 81
+ L DL ISRL +IK +V + I+ + +F V++ D +S D+
Sbjct: 11 HSGSLEKEDLGTRISRLTRRVEEIKGEVCNMISKKYSEFLPTMQSAQALVTQVDTLSNDI 70
Query: 82 SDI-------------LGLISYRPIDKEVK---------EIIDEVSAKMKE---ARVKKE 116
+ + + + + ++++ + + E S+ ++E A +K+
Sbjct: 71 DQLKSRIETEVCRDLHISTVEFTNLKQQLERDSVVLTLLKQLQEFSSAIEEYNSALAEKK 130
Query: 117 LLELVRAIVEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKE 176
+ R + E E LK +K R F + L+ L +L V +N ++Y L ++
Sbjct: 131 YIPAARHLEEAQECLKLLK-----SRKCFDLKMLKSLSMELTVQKQN----ILYHL-GED 180
Query: 177 W--LVCFEEIQELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGI-ELRTVLEAMEVVGI 233
W LV ++ +ES ++ E L Q + + + + +VL A ++G
Sbjct: 181 WQKLVVWKFPPAKDTSSLESCLQTELH----LCTEQPEKEDMTPLPSISSVLLAFSILGE 236
Query: 234 LDYGLAKVADLKIKYVISPAVSYGSPITFVEELNPGPEKMSEAILRMVPSVDDKIENVDG 293
L L + +KY++ P V+ S L+ E+ ++ S+ +E+
Sbjct: 237 LPTKLKSFGQMLLKYILKPLVTCPS-------LHAVIERQPSSVSICFESLTTDLEHPSP 289
Query: 294 KTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLT------------WPRISELIISNFLSK 341
++ I V++ + K++ G++ W +SE +I N L
Sbjct: 290 PEAFAKIRLVLEVLQKQLLDLPLDADLEIGKVPGIVLAEMLGEGIWEDLSECLIRNCLVY 349
Query: 342 VVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTE 401
+P ++SKL ++++II T EFE LKEM F+ D D L +A N+ HFA++K +
Sbjct: 350 SIPTNSSKLQEYEEIIQSTEEFEKFLKEMRFLKG-DTTD--LLKYARNINSHFANKKCQD 406
Query: 402 ILAKARNLLLQ-----------CDFAVPQ-ESTGKD------PICK---NDGMAVDSSEH 440
++ ARNL+ C A+P S D +CK D ++
Sbjct: 407 VIVAARNLMTSEIHNTVKIGPDCKEALPDLPSPDADHKLQVQTVCKAQFTDAGNLEPETS 466
Query: 441 VVDLLFMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAILLYEAIVPVK 500
+ F C +++A +LM+L +Q L + SS + A + +++ R+ L+ +VP
Sbjct: 467 LDPQSFSLPTCRISEAVKKLMELAYQTLLEATTSSDQCAVQLFYSVRNIFHLFHDVVPTY 526
Query: 501 LERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDF-PSSIKEHAVFADMAPRFHLMAE 559
+ L + Q+A + HN+C+Y++ +L ++ P F D+ P F +
Sbjct: 527 HKENLRKLPQLAAIHHNNCMYIAHHLLTLGHQFRLRLAPILCDGTTTFVDLVPGFRRLGT 586
Query: 560 EILQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLP 619
E Q+Q L E L A F N + + +A ++ QV+ L ++ I+W+ +L
Sbjct: 587 ECFLAQMQAQKGELLERLSSARSFANMDDEENYSAASKAVRQVLHQLRRLGIVWQDVLPV 646
Query: 620 STYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQK 679
+ Y ++M T+L + + + I L+D++ E+ +L L +++ + L+ N+
Sbjct: 647 NIYCKAMGTLLNTAIAEMMSRITALEDISTEDGDRLYSLCKTVMDEGPQVFAPLSDENKN 706
Query: 680 GKTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIK 738
K + + + +P F++L +L L+ I W G+ L+ F SE++ I+
Sbjct: 707 KKYQEEVPVYVSKWMP----FKELMIMLQASLQEIGDRWADGKGPLATAFPSSEVKALIR 762
Query: 739 AIFADSTLRKECLWRIE 755
A+F ++ R L +I+
Sbjct: 763 ALFQNTERRAAALAKIK 779
>sp|O44218|ZW10_DROPS Centromere/kinetochore protein zw10 OS=Drosophila pseudoobscura
pseudoobscura GN=mit(1)15 PE=3 SV=2
Length = 718
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 181/430 (42%), Gaps = 48/430 (11%)
Query: 329 RISELIISNFLSKVVPEDASKLADFQ--KIIDHTSEFEAALKEMMFISASDNKDARLSNF 386
R+ L++++ L VPE + ++Q + + + FE L + I+ D LS F
Sbjct: 332 RMMHLLVNDCLIPAVPE---TMEEYQASTLCEDVAHFEQYLADSFLINPE--VDRGLSQF 386
Query: 387 AENVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLF 446
E ++ +R + +L R ++ Q D Q+ P N M V + F
Sbjct: 387 IEQYGTYYRNRLCSRVLESTREII-QRDL---QDMVLVAP--NNQAMDVTGCDP-----F 435
Query: 447 MSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYHAARDAIL-LYEAIVPVKLERQL 505
+ RC+V+++A MKL+ +IL+ + +L Y VP ++ L
Sbjct: 436 LFPRCMVSRSAQDFMKLMERILRQPTEKPGEDEADPLAGVIGMMLQTYIDEVPKVHKKLL 495
Query: 506 EGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQ 565
E I Q +VL HN+C+Y + + A + FP+ +K M H + Q
Sbjct: 496 ESIPQQSVLFHNNCMYFTHWVAQNANKGIESFPALVKTLQATGTM----HFRVQVTYQTS 551
Query: 566 IQIVIFNLREALDGADGFQNTHQIQQFESAKFSIEQVVFILEKVHIIWEPLLLPSTYNRS 625
I + ++ E+ + F++ H + + Q + LE + +W+ +L + YN +
Sbjct: 552 I---LMDIMESFE----FESPHTLGT--GPLKLVRQCLRQLELLKNVWQNVLPDNVYNST 602
Query: 626 MCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGD 685
+L + + + R I D++A L LI ++LE L V+Q
Sbjct: 603 FVELLHAFINELVRHIFTQRDISATMASDLSDLIDVVLEKAPKLFRDPHEVHQ------- 655
Query: 686 FARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESGE-LLSCGFTLSEIEDFIKAIFADS 744
+ S K ++L +++ L+ IT W G L+ + EI I+A+F D+
Sbjct: 656 --------VRSWMKLQQLKTMMNASLKEITELWCKGAGPLTANYKADEIRYLIRALFQDT 707
Query: 745 TLRKECLWRI 754
R + + +I
Sbjct: 708 DRRAKAITQI 717
>sp|Q9W4X9|ZW10_DROME Centromere/kinetochore protein zw10 OS=Drosophila melanogaster
GN=mit(1)15 PE=1 SV=2
Length = 721
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 185/435 (42%), Gaps = 59/435 (13%)
Query: 329 RISELIISNFLSKVVPEDASKLADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAE 388
++ +L++ L VPE + + + ++ E L + I+ +D L F E
Sbjct: 336 KMLKLLVDECLIPAVPESTEEYQT-STLCEDVAQLEQLLVDSFIINPE--QDRALGQFVE 392
Query: 389 NVEVHFASRKKTEILAKARNLLLQCDFAVPQESTGKDPICKNDGMAVDSSEH---VVDLL 445
E ++ +R +L AR ++ Q D D + V + H V +
Sbjct: 393 KYETYYRNRMYRRVLETAREII-QRDL--------------QDMVLVAPNNHSAEVANDP 437
Query: 446 FMSERCVVTKAASQLMKLVHQILQDICLSSTRVAFEFYH--AARDAILLYEAI--VPVKL 501
F+ RC+++K+A +KL+ +IL+ + ++ + A +I+L+ I VP
Sbjct: 438 FLFPRCMISKSAQDFVKLMDRILRQ---PTDKLGDQEADPIAGVISIMLHTYINEVPKVH 494
Query: 502 ERQLEGINQVAVLMHNDCLYLSQEILGFAFEYHSDFPSSIKEHAVFADMAPRFHLMAEEI 561
+ LE I Q AVL HN+C++ + + ++ + S+ A + H +
Sbjct: 495 RKLLESIPQQAVLFHNNCMFFTH----WVAQHANKGIESLAALAKTLQATGQQHFRVQVD 550
Query: 562 LQRQIQIVIFNLREALDGADGFQNTHQIQQFESAKFS-IEQVVFILEKVHIIWEPLLLPS 620
Q I + I E F++TH + S + Q + LE + +W +L +
Sbjct: 551 YQSSILMGIMQEFE-------FESTHTLG---SGPLKLVRQCLRQLELLKNVWANVLPET 600
Query: 621 TYNRSMCTVLESVFSRITRDILLLDDMAAEETLQLQRLIHLMLENLSSLLESLAAVNQKG 680
YN + C ++ + + + R + L D++A+ +L LI ++L+ +L V Q
Sbjct: 601 VYNATFCELINTFVAELIRRVFTLRDISAQMACELSDLIDVVLQRAPTLFREPNEVVQ-- 658
Query: 681 KTEGDFARPLDDLIPSLCKFRKLAELLDMPLRSITAAWESG-ELLSCGFTLSEIEDFIKA 739
+ S K ++L +L+ L IT W G L+ + EI+ I+A
Sbjct: 659 -------------VLSWLKLQQLKAMLNASLMEITELWGDGVGPLTASYKSDEIKHLIRA 705
Query: 740 IFADSTLRKECLWRI 754
+F D+ R + + +I
Sbjct: 706 LFQDTDWRAKAITQI 720
>sp|O44219|ZW10_DROGR Centromere/kinetochore protein zw10 OS=Drosophila grimshawi
GN=mit(1)15 PE=3 SV=1
Length = 714
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 199/467 (42%), Gaps = 54/467 (11%)
Query: 297 YSGIIQVVKFIHKRICLQNGSW------VRCFGRLTWPRISELIISNFLSKVVPEDASKL 350
Y + + + + K +C N S G R+ +L++ L +V PE +
Sbjct: 292 YKDVFEHFRLLLKTLCGINSSLNGTQHVFTVIGDHVKERMLQLLLDECLIRV-PETMDEY 350
Query: 351 ADFQKIIDHTSEFEAALKEMMFISASDNKDARLSNFAENVEVHFASRKKTEILAKARNLL 410
+ + + +EFE L + I+ D L+ F + + ++ +R +LA AR ++
Sbjct: 351 -NSSTLCEDVAEFEHQLVDTFLINPE--LDTTLTEFTKQFDTYYRNRLSERVLATAREII 407
Query: 411 LQCDFAVPQESTGKDPICKNDGMAVDSSEHVVDLLFMSERCVVTKAAS-QLMKLVHQILQ 469
Q D Q+ T P + +A D LLF RC+V+K+A +KL+ ++++
Sbjct: 408 -QRDL---QDMTLVAPSNLSANVASDP------LLF--PRCMVSKSAQVDFVKLMERVVR 455
Query: 470 DICLSSTRVAFEFYHAARDAILLYEAIVPVKLERQLEGINQVAVLMHNDCLYLSQEILGF 529
++ + Y VP ++ L+ I Q + L +N+C+YL+ +
Sbjct: 456 QPDKAAEGTPDPLGGVIGLLLDAYINEVPKVHKKLLKSIPQQSALFYNNCMYLTHWVAQH 515
Query: 530 AFEYHSDFPSSIKEHAVFADMAPRFHLMAEEILQRQIQIVIFNLREALDGADGFQNTHQI 589
+ FPS +K + + HL + Q I + I + E F+N H +
Sbjct: 516 TKDNIDGFPSLVK---ILQSTGNK-HLRVQVSYQESILMDIMSSFE-------FENPHTL 564
Query: 590 QQFESAKFS-IEQVVFILEKVHIIWEPLLLPSTYNRSMCTVLESVFSRITRDILLLDDMA 648
+A + Q + LE + +W+ + + YN S C +L++ + + + + L D++
Sbjct: 565 G---TAPLRLVRQCLRQLELLKNVWQQVPAENVYNNSFCELLQAFINELVQRVFSLRDIS 621
Query: 649 AEETLQLQRLIHLMLENLSSLLESLAAVNQKGKTEGDFARPLDDLIPSLCKFRKLAELLD 708
A +L LI ++LE S L + D + S K ++L +++
Sbjct: 622 ATMASELSDLIDVVLEKASILFHD----------KNDVVH-----VRSWLKLQQLKIMMN 666
Query: 709 MPLRSITAAWESG-ELLSCGFTLSEIEDFIKAIFADSTLRKECLWRI 754
L+ + W G L+ + EI+ I+A+F D+ R + + +I
Sbjct: 667 ASLKEFSELWCDGVGPLTANYHADEIKHLIRALFQDTDRRAKAITQI 713
>sp|Q8L838|COG4_ARATH Conserved oligomeric Golgi complex subunit 4 OS=Arabidopsis
thaliana GN=COG4 PE=2 SV=1
Length = 738
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 99 EIIDEVSAKMKEARVKKE----LLELVRAIVEIGERLKGVKEALRDGRLRFAAEEL-REL 153
++ D+VS K++E + + L + AIVE G ++GVK AL AA+ + R L
Sbjct: 100 DLADQVSGKVRELDLAQSRVNVTLSRIDAIVERGNCIEGVKTALESEDYESAAKFVQRFL 159
Query: 154 KKDLRVGDE--------NASEPLVYGLLRKEWLVCFEEI-QELLVKFVE--SAVRFEKES 202
+ DL+ D +AS+ + G+ +K+ L ++ +++FV S + E E
Sbjct: 160 QIDLQYKDSGSDQSEQLHASKEQLEGIAKKKLLAAIDQRDHPTILRFVRLYSPLGMETEG 219
Query: 203 NRVLVKYQLTVDGLDGIELRTVLEAMEVVGILDYGLAKV 241
++ V Y V I LR +E VV +++ GL +V
Sbjct: 220 LQLYVGYLKKV-----IALRGRMEYENVVELMEQGLGQV 253
>sp|Q9CHN8|RSMA_LACLA Ribosomal RNA small subunit methyltransferase A OS=Lactococcus
lactis subsp. lactis (strain IL1403) GN=rsmA PE=3 SV=1
Length = 294
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 20/128 (15%)
Query: 236 YGLAKVADLKIKYVISPAVSYGSPIT-FVEELNPGPEKMSEAILRMV----PSVDDKIEN 290
YG +A ++Y + +V++ P T F+ P P + AIL+MV P V+ + E
Sbjct: 175 YGSLSIA---VQYYMEASVAFIVPRTVFI----PAP-NVDSAILKMVRREAPLVEVEDEE 226
Query: 291 VDGKTIYSGIIQVVKFIHKRICLQNGSWVRCFGRLTWPRISELIISNFLSKVVPEDASKL 350
KT++S F+H+R L N FG+ + P I +L+ +S + +A +
Sbjct: 227 WFFKTMHSS------FVHRRKTLMNNLQA-AFGKESKPEIEKLLAQAEISPTIRGEALSI 279
Query: 351 ADFQKIID 358
+F K+ D
Sbjct: 280 EEFAKLAD 287
>sp|A6Q6I2|RPOB_SULNB DNA-directed RNA polymerase subunit beta OS=Sulfurovum sp. (strain
NBC37-1) GN=rpoB PE=3 SV=1
Length = 1385
Score = 35.0 bits (79), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 93 IDKEVKEIIDEVSAKMKEARVKKELLELVRAIVEIGERLKGVKEALRDGRLRFAA--EEL 150
ID+E E++ +V A + E ++KK + + + +I I + +G +++ + F A E L
Sbjct: 306 IDQESGEVLYDVVAPLDETKLKKMIEQGIESIEIINDLAEGTDKSIINA---FIADNESL 362
Query: 151 RELKKDLRVGDENA-SEPLVYGLLRKEWLVCFEEIQELLVKFVESAVRFE-KESNRVLVK 208
R LK+ + DEN S +Y ++R V E + L + R++ E R+ +
Sbjct: 363 RLLKQTEEIDDENVLSAIRIYKVMRPGEPVTPEAAKSFLRQLFFDPERYDLTEVGRMKMN 422
Query: 209 YQLTVDGLDGIELRTVLEAMEVVGILDY 236
++L GLD + TVL A +++ + Y
Sbjct: 423 HKL---GLDIPQYATVLTAEDLINTVKY 447
>sp|Q54DD2|THOPL_DICDI Thimet-like oligopeptidase OS=Dictyostelium discoideum
GN=DDB_G0292362 PE=3 SV=1
Length = 673
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 19/160 (11%)
Query: 69 DTVSRTDEISTDLSDI---LGLISYRPIDKEVKEIIDEVSAKMKEARVKKELLE-LVRAI 124
+T TD++ +I L ++ D++V+++ +EV A + + + + E L +A
Sbjct: 46 NTFEATDKLDVKFRNIESSLTFLANASTDEKVRDVANEVEATLSKYSIATSMREDLYQAY 105
Query: 125 VEIGERLKGVKEALRDGRLRFAAEELRELKKDLRVGDENASEPLVYGLLRKEWLVCFEEI 184
V+ ++ KE+ + E+LR + K L ++N + L KE E++
Sbjct: 106 VDCCKQNNDFKES------DLSKEQLRYVSKTLEGFEKNGLQ------LPKEKR---EKL 150
Query: 185 QELLVKFVESAVRFEKESNRVLVKYQLTVDGLDGIELRTV 224
+E++ K +++++F K K +++ L+GI T+
Sbjct: 151 KEIMTKISDNSIKFSKNIADDKTKLSFSMEQLNGIPKETI 190
>sp|A4WH15|SYC_PYRAR Cysteine--tRNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514
/ JCM 11321) GN=cysS PE=3 SV=1
Length = 476
Score = 34.3 bits (77), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 15/80 (18%)
Query: 69 DTVSRTDEIS-----TDLSDILGLISYRPIDKEVKEIID---EVSAKMKEARVKKELLEL 120
D +SR +S ++DILG++ R + KEV+E + EV AK+++ R + +L +
Sbjct: 388 DKISRNTALSILSQYVKMADILGVLERREVPKEVEEAVKAAVEVRAKLRKER-QYQLADY 446
Query: 121 VRAIVEIGERLKGVKEALRD 140
+R ERL G+ L D
Sbjct: 447 IR------ERLAGIGVELHD 460
>sp|Q7UZI3|SYV_PROMP Valine--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=valS PE=3 SV=1
Length = 918
Score = 33.1 bits (74), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 58 QDFASLFSLCNDTVSRTDEISTDLSDILGLISYRP-IDKEVKEIIDEVSAKMKEARVKKE 116
DF +L +L + ++++D+ + IS + IDK KEI+DE AK+KE ++ E
Sbjct: 849 NDFVNLEALKDRLTKDLKKVNSDIETLNKRISNKNFIDKAPKEIVDECFAKLKEGNLQSE 908
Query: 117 LL 118
++
Sbjct: 909 II 910
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 258,733,812
Number of Sequences: 539616
Number of extensions: 10533255
Number of successful extensions: 33709
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 33600
Number of HSP's gapped (non-prelim): 101
length of query: 759
length of database: 191,569,459
effective HSP length: 125
effective length of query: 634
effective length of database: 124,117,459
effective search space: 78690469006
effective search space used: 78690469006
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)