Query 004368
Match_columns 758
No_of_seqs 474 out of 4078
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 22:15:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004368.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004368hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 2E-128 5E-133 1026.0 71.8 673 50-749 4-681 (682)
2 PRK10115 protease 2; Provision 100.0 2E-109 3E-114 953.0 85.0 676 52-752 2-681 (686)
3 KOG2237 Predicted serine prote 100.0 1E-108 3E-113 865.2 50.9 683 49-751 3-710 (712)
4 COG1505 Serine proteases of th 100.0 4.7E-81 1E-85 655.4 50.7 629 69-748 2-648 (648)
5 PF02897 Peptidase_S9_N: Proly 100.0 1.6E-57 3.5E-62 502.9 48.2 396 52-472 1-413 (414)
6 COG1506 DAP2 Dipeptidyl aminop 100.0 3.8E-44 8.2E-49 410.6 50.3 525 193-749 62-619 (620)
7 KOG2281 Dipeptidyl aminopeptid 100.0 2.6E-31 5.5E-36 279.4 31.7 330 390-745 518-866 (867)
8 PF00326 Peptidase_S9: Prolyl 100.0 1.6E-32 3.5E-37 274.8 16.8 211 532-749 1-212 (213)
9 KOG2100 Dipeptidyl aminopeptid 100.0 5.3E-28 1.1E-32 278.9 47.2 389 336-750 347-751 (755)
10 PRK13604 luxD acyl transferase 99.8 2.5E-20 5.5E-25 189.9 18.4 225 486-729 9-249 (307)
11 PRK10566 esterase; Provisional 99.8 9E-20 2E-24 187.4 18.2 231 499-747 12-249 (249)
12 PLN02298 hydrolase, alpha/beta 99.8 9.8E-19 2.1E-23 187.5 22.1 264 480-758 26-328 (330)
13 COG3458 Acetyl esterase (deace 99.8 4.5E-19 9.7E-24 170.5 15.3 231 479-726 49-302 (321)
14 PRK05077 frsA fermentation/res 99.8 2.3E-18 4.9E-23 188.2 22.3 240 483-747 165-413 (414)
15 PLN02442 S-formylglutathione h 99.8 3.8E-18 8.3E-23 177.6 21.6 224 485-724 17-262 (283)
16 PF05448 AXE1: Acetyl xylan es 99.8 7.2E-19 1.6E-23 184.0 13.8 247 481-746 51-320 (320)
17 TIGR02821 fghA_ester_D S-formy 99.8 1.5E-17 3.2E-22 172.9 22.8 241 486-746 13-274 (275)
18 TIGR02800 propeller_TolB tol-p 99.8 3.6E-17 7.8E-22 181.5 26.6 277 93-408 118-397 (417)
19 PRK10162 acetyl esterase; Prov 99.8 2.2E-17 4.8E-22 174.9 23.1 234 485-748 56-317 (318)
20 PRK04792 tolB translocation pr 99.8 5.1E-16 1.1E-20 172.2 33.2 205 193-412 220-427 (448)
21 PRK01029 tolB translocation pr 99.8 3.7E-16 8E-21 171.9 30.0 207 194-408 188-403 (428)
22 PRK04043 tolB translocation pr 99.7 8.2E-16 1.8E-20 168.0 30.1 204 193-408 190-400 (419)
23 PRK05371 x-prolyl-dipeptidyl a 99.7 1.3E-16 2.7E-21 185.5 24.9 201 538-750 272-523 (767)
24 TIGR01840 esterase_phb esteras 99.7 2.5E-17 5.5E-22 164.4 15.8 192 502-706 2-197 (212)
25 PLN02385 hydrolase; alpha/beta 99.7 1.2E-16 2.5E-21 172.6 20.7 252 483-748 58-347 (349)
26 PRK03629 tolB translocation pr 99.7 5.6E-15 1.2E-19 163.3 34.1 205 193-412 201-408 (429)
27 PRK05137 tolB translocation pr 99.7 2.4E-15 5.2E-20 167.1 30.5 203 193-408 204-412 (435)
28 KOG1552 Predicted alpha/beta h 99.7 1.4E-16 3.1E-21 154.4 17.5 209 486-736 35-245 (258)
29 PRK04043 tolB translocation pr 99.7 3.9E-15 8.4E-20 162.7 30.4 241 203-467 155-404 (419)
30 COG0412 Dienelactone hydrolase 99.7 3.2E-16 7E-21 157.4 19.9 216 487-748 3-235 (236)
31 PRK00178 tolB translocation pr 99.7 5.2E-15 1.1E-19 164.6 31.6 203 193-408 201-406 (430)
32 PRK01029 tolB translocation pr 99.7 2.7E-15 5.9E-20 165.1 28.6 252 195-467 141-407 (428)
33 PF01738 DLH: Dienelactone hyd 99.7 2.7E-17 5.9E-22 165.1 11.6 205 499-747 1-218 (218)
34 PRK05137 tolB translocation pr 99.7 5.2E-15 1.1E-19 164.4 30.6 245 202-467 165-416 (435)
35 PRK02889 tolB translocation pr 99.7 1.8E-15 3.8E-20 167.4 26.4 203 193-408 198-403 (427)
36 PHA02857 monoglyceride lipase; 99.7 6.5E-16 1.4E-20 161.3 19.8 238 491-747 5-274 (276)
37 PRK04922 tolB translocation pr 99.7 3.7E-14 8E-19 157.4 31.4 203 193-408 206-411 (433)
38 PRK10749 lysophospholipase L2; 99.7 3.1E-15 6.8E-20 160.0 21.7 246 487-746 31-329 (330)
39 TIGR00976 /NonD putative hydro 99.7 2.5E-15 5.4E-20 171.5 20.3 134 491-635 1-137 (550)
40 PF02129 Peptidase_S15: X-Pro 99.7 2.6E-16 5.6E-21 163.5 11.0 215 495-724 1-271 (272)
41 KOG1455 Lysophospholipase [Lip 99.7 4.3E-15 9.4E-20 147.0 18.8 247 486-746 27-312 (313)
42 COG0657 Aes Esterase/lipase [L 99.6 3.3E-15 7.1E-20 158.7 17.7 228 493-744 58-308 (312)
43 PRK03629 tolB translocation pr 99.6 8E-14 1.7E-18 154.1 29.1 242 203-466 164-409 (429)
44 PRK11460 putative hydrolase; P 99.6 1.1E-14 2.4E-19 147.0 18.4 185 514-747 14-209 (232)
45 PRK02889 tolB translocation pr 99.6 1.7E-13 3.8E-18 151.6 29.6 240 203-466 164-406 (427)
46 PRK04922 tolB translocation pr 99.6 1.6E-13 3.5E-18 152.3 28.8 243 202-466 167-414 (433)
47 COG1647 Esterase/lipase [Gener 99.6 4.1E-15 8.8E-20 139.8 12.5 207 516-744 15-242 (243)
48 PRK04792 tolB translocation pr 99.6 4E-13 8.6E-18 149.2 30.5 243 202-466 182-428 (448)
49 PRK01742 tolB translocation pr 99.6 4.1E-13 9E-18 148.8 30.6 199 193-412 206-406 (429)
50 PRK00178 tolB translocation pr 99.6 4.4E-13 9.5E-18 149.2 29.5 244 201-466 161-409 (430)
51 PLN02652 hydrolase; alpha/beta 99.6 1.1E-13 2.4E-18 150.1 22.8 244 485-749 109-390 (395)
52 PRK10985 putative hydrolase; P 99.6 7.1E-14 1.5E-18 149.1 17.6 242 488-748 33-322 (324)
53 PF07859 Abhydrolase_3: alpha/ 99.5 4.4E-15 9.4E-20 148.4 6.3 187 519-725 1-209 (211)
54 KOG4391 Predicted alpha/beta h 99.5 7.7E-14 1.7E-18 129.7 14.0 234 483-749 51-285 (300)
55 PF06500 DUF1100: Alpha/beta h 99.5 6.7E-14 1.5E-18 147.2 15.0 239 483-747 162-410 (411)
56 PLN02511 hydrolase 99.5 2.4E-13 5.2E-18 148.1 19.7 243 486-748 71-367 (388)
57 PF10503 Esterase_phd: Esteras 99.5 1.6E-13 3.5E-18 134.7 16.3 193 501-706 3-198 (220)
58 COG2267 PldB Lysophospholipase 99.5 3.7E-13 8E-18 140.4 19.3 239 487-748 10-296 (298)
59 KOG1515 Arylacetamide deacetyl 99.5 1.1E-12 2.3E-17 136.7 20.5 240 486-745 63-334 (336)
60 PF12695 Abhydrolase_5: Alpha/ 99.5 1.6E-13 3.5E-18 128.0 11.1 145 518-724 1-145 (145)
61 TIGR03611 RutD pyrimidine util 99.5 4.9E-13 1.1E-17 137.3 15.7 207 515-743 12-255 (257)
62 TIGR03343 biphenyl_bphD 2-hydr 99.5 3.9E-13 8.5E-18 140.7 15.1 210 515-744 29-281 (282)
63 PF02230 Abhydrolase_2: Phosph 99.5 1.7E-13 3.7E-18 137.1 11.5 189 514-747 12-216 (216)
64 TIGR02800 propeller_TolB tol-p 99.5 2.6E-11 5.7E-16 134.5 29.9 246 199-466 152-400 (417)
65 PRK01742 tolB translocation pr 99.5 2.2E-11 4.8E-16 135.0 28.5 235 202-465 168-406 (429)
66 COG0823 TolB Periplasmic compo 99.4 4.5E-12 9.7E-17 137.6 19.3 205 193-408 195-402 (425)
67 PF12715 Abhydrolase_7: Abhydr 99.4 7.7E-13 1.7E-17 136.6 12.7 143 481-628 83-258 (390)
68 PRK00870 haloalkane dehalogena 99.4 1E-11 2.2E-16 131.4 21.5 127 487-628 22-148 (302)
69 TIGR01607 PST-A Plasmodium sub 99.4 4.1E-12 8.9E-17 135.6 17.6 241 491-744 2-331 (332)
70 PF00930 DPPIV_N: Dipeptidyl p 99.4 9E-12 1.9E-16 134.4 20.0 243 193-455 45-353 (353)
71 COG2936 Predicted acyl esteras 99.4 3.6E-12 7.8E-17 138.6 16.4 219 483-716 16-287 (563)
72 TIGR02427 protocat_pcaD 3-oxoa 99.4 2.6E-12 5.5E-17 131.1 13.7 199 515-734 12-243 (251)
73 COG0823 TolB Periplasmic compo 99.4 5.8E-11 1.2E-15 129.0 24.8 233 212-464 168-403 (425)
74 PLN02824 hydrolase, alpha/beta 99.4 9.7E-12 2.1E-16 131.1 18.3 214 516-745 29-293 (294)
75 PLN00021 chlorophyllase 99.4 3.3E-11 7.2E-16 126.3 22.0 119 496-631 36-167 (313)
76 COG0429 Predicted hydrolase of 99.4 1.2E-11 2.6E-16 124.4 17.5 240 490-748 53-342 (345)
77 COG3509 LpqC Poly(3-hydroxybut 99.4 1.1E-11 2.4E-16 122.4 16.5 128 495-630 43-179 (312)
78 COG4099 Predicted peptidase [G 99.4 3E-12 6.6E-17 124.9 12.0 177 494-716 169-354 (387)
79 PRK11071 esterase YqiA; Provis 99.4 7.6E-12 1.6E-16 122.0 14.9 170 517-726 2-175 (190)
80 PLN02872 triacylglycerol lipas 99.4 6.2E-12 1.4E-16 135.8 15.0 145 481-629 39-196 (395)
81 TIGR02240 PHA_depoly_arom poly 99.4 8.1E-12 1.8E-16 130.3 15.5 206 517-746 26-266 (276)
82 TIGR03056 bchO_mg_che_rel puta 99.4 2.6E-11 5.7E-16 126.4 19.2 206 516-743 28-277 (278)
83 TIGR01250 pro_imino_pep_2 prol 99.4 2.5E-11 5.4E-16 126.7 18.9 107 515-630 24-131 (288)
84 TIGR01249 pro_imino_pep_1 prol 99.4 3.1E-11 6.6E-16 127.9 19.3 122 490-629 8-129 (306)
85 TIGR03100 hydr1_PEP hydrolase, 99.3 2.2E-11 4.8E-16 126.6 16.7 131 487-631 3-135 (274)
86 COG0400 Predicted esterase [Ge 99.3 2.7E-11 5.8E-16 117.8 15.6 187 513-747 15-206 (207)
87 TIGR03101 hydr2_PEP hydrolase, 99.3 1.5E-10 3.2E-15 118.1 21.0 214 489-716 3-241 (266)
88 PLN02965 Probable pheophorbida 99.3 7E-11 1.5E-15 121.7 19.0 198 518-735 5-244 (255)
89 PRK10673 acyl-CoA esterase; Pr 99.3 3E-11 6.5E-16 124.4 15.7 208 514-745 14-254 (255)
90 TIGR03695 menH_SHCHC 2-succiny 99.3 4.9E-11 1.1E-15 121.3 16.9 103 517-630 2-105 (251)
91 PRK03592 haloalkane dehalogena 99.3 6E-11 1.3E-15 125.1 18.0 102 515-629 26-127 (295)
92 PLN02679 hydrolase, alpha/beta 99.3 4.8E-11 1E-15 129.2 17.4 212 516-745 88-356 (360)
93 KOG1838 Alpha/beta hydrolase [ 99.3 1.4E-10 3.1E-15 121.3 19.8 198 486-694 93-339 (409)
94 TIGR01738 bioH putative pimelo 99.3 2.4E-11 5.2E-16 123.4 14.0 193 517-735 5-239 (245)
95 PLN02894 hydrolase, alpha/beta 99.3 2.4E-10 5.1E-15 125.2 21.0 107 514-629 103-210 (402)
96 PLN03087 BODYGUARD 1 domain co 99.3 1.1E-10 2.3E-15 128.6 17.7 124 491-629 180-308 (481)
97 PRK14875 acetoin dehydrogenase 99.3 7.5E-11 1.6E-15 128.8 16.3 103 514-629 129-231 (371)
98 TIGR01392 homoserO_Ac_trn homo 99.3 1.1E-10 2.3E-15 126.2 17.0 112 516-629 31-161 (351)
99 TIGR01836 PHA_synth_III_C poly 99.3 1.3E-10 2.9E-15 125.4 17.5 109 515-632 62-173 (350)
100 PRK06489 hypothetical protein; 99.3 1.2E-10 2.5E-15 126.4 17.1 216 516-746 69-357 (360)
101 COG2945 Predicted hydrolase of 99.3 1.2E-10 2.7E-15 107.5 14.0 176 514-743 26-204 (210)
102 PLN02211 methyl indole-3-aceta 99.2 2.3E-10 5E-15 118.8 17.9 107 513-629 15-121 (273)
103 PF12697 Abhydrolase_6: Alpha/ 99.2 4.6E-12 1E-16 126.8 4.9 188 519-725 1-217 (228)
104 PRK03204 haloalkane dehalogena 99.2 1.2E-10 2.5E-15 122.2 15.6 103 515-629 33-135 (286)
105 PRK10349 carboxylesterase BioH 99.2 1.4E-10 3.1E-15 119.5 14.3 194 517-736 14-248 (256)
106 PF03583 LIP: Secretory lipase 99.2 3.2E-10 6.9E-15 118.0 16.7 201 537-752 18-287 (290)
107 PRK07581 hypothetical protein; 99.2 1.5E-10 3.1E-15 124.7 14.2 109 515-628 40-157 (339)
108 KOG3101 Esterase D [General fu 99.2 5.8E-11 1.3E-15 110.3 9.3 211 497-724 26-261 (283)
109 PRK00175 metX homoserine O-ace 99.2 3.1E-10 6.7E-15 123.7 16.8 224 516-746 48-374 (379)
110 KOG4627 Kynurenine formamidase 99.2 2.2E-10 4.8E-15 106.2 10.6 198 514-746 65-267 (270)
111 PLN02578 hydrolase 99.2 1.2E-09 2.6E-14 118.1 18.2 96 516-628 86-185 (354)
112 PRK11126 2-succinyl-6-hydroxy- 99.2 1E-09 2.2E-14 112.0 16.7 99 516-629 2-101 (242)
113 KOG4178 Soluble epoxide hydrol 99.1 5.1E-09 1.1E-13 106.1 20.4 100 514-627 42-145 (322)
114 PRK08775 homoserine O-acetyltr 99.1 1E-09 2.2E-14 118.3 16.3 186 540-745 94-338 (343)
115 PF00756 Esterase: Putative es 99.1 3.3E-11 7.1E-16 123.9 4.5 204 496-724 5-236 (251)
116 PF08840 BAAT_C: BAAT / Acyl-C 99.1 4.9E-10 1.1E-14 111.3 12.4 167 577-748 4-212 (213)
117 PF00930 DPPIV_N: Dipeptidyl p 99.1 1.1E-08 2.4E-13 110.4 24.0 201 194-398 104-350 (353)
118 PRK10439 enterobactin/ferric e 99.1 8.8E-09 1.9E-13 112.1 22.0 202 487-724 181-391 (411)
119 KOG4667 Predicted esterase [Li 99.1 4.6E-09 9.9E-14 98.5 14.7 197 513-728 30-243 (269)
120 PLN03084 alpha/beta hydrolase 99.0 4.8E-09 1E-13 113.3 17.2 225 493-744 111-382 (383)
121 KOG3043 Predicted hydrolase re 99.0 2.2E-09 4.7E-14 101.8 10.3 162 539-747 61-241 (242)
122 cd00312 Esterase_lipase Estera 99.0 1.3E-09 2.8E-14 123.6 10.4 128 499-631 79-214 (493)
123 KOG4409 Predicted hydrolase/ac 99.0 2.6E-08 5.7E-13 101.2 17.2 211 515-744 89-362 (365)
124 KOG1454 Predicted hydrolase/ac 99.0 9.8E-09 2.1E-13 108.4 14.6 213 514-746 56-324 (326)
125 PLN02980 2-oxoglutarate decarb 99.0 1.4E-08 3.1E-13 128.7 18.6 234 499-746 1356-1639(1655)
126 PF12740 Chlorophyllase2: Chlo 98.9 3.4E-09 7.5E-14 105.5 10.2 115 499-630 4-131 (259)
127 PRK06765 homoserine O-acetyltr 98.9 1E-08 2.2E-13 111.0 14.9 224 515-745 55-387 (389)
128 COG0627 Predicted esterase [Ge 98.9 1.2E-08 2.6E-13 106.0 14.5 226 513-750 51-315 (316)
129 PF03403 PAF-AH_p_II: Platelet 98.9 1.6E-08 3.4E-13 108.9 12.5 114 513-629 97-261 (379)
130 PRK05855 short chain dehydroge 98.9 3E-08 6.5E-13 115.2 15.5 107 492-615 8-114 (582)
131 COG2272 PnbA Carboxylesterase 98.8 1.3E-08 2.8E-13 108.3 8.4 129 493-630 76-217 (491)
132 PF14583 Pectate_lyase22: Olig 98.8 8.1E-06 1.8E-10 85.6 28.5 204 194-409 39-271 (386)
133 PF08662 eIF2A: Eukaryotic tra 98.8 7.7E-07 1.7E-11 87.0 19.6 146 194-349 9-164 (194)
134 TIGR03866 PQQ_ABC_repeats PQQ- 98.7 1.2E-05 2.6E-10 84.4 28.7 241 194-466 34-282 (300)
135 TIGR01838 PHA_synth_I poly(R)- 98.7 3.9E-07 8.3E-12 101.7 16.1 107 517-631 189-303 (532)
136 PF06342 DUF1057: Alpha/beta h 98.7 1.6E-06 3.5E-11 86.1 18.0 204 487-705 7-240 (297)
137 KOG3847 Phospholipase A2 (plat 98.7 5.7E-07 1.2E-11 89.3 14.7 114 513-629 115-274 (399)
138 COG4946 Uncharacterized protei 98.6 5.8E-06 1.2E-10 86.0 21.4 246 193-470 39-302 (668)
139 PF00561 Abhydrolase_1: alpha/ 98.6 4.8E-08 1E-12 98.3 5.1 78 546-629 1-78 (230)
140 PF05728 UPF0227: Uncharacteri 98.6 1E-06 2.2E-11 84.8 13.7 180 518-743 1-186 (187)
141 PF00135 COesterase: Carboxyle 98.6 8.4E-08 1.8E-12 110.2 7.4 127 499-629 109-244 (535)
142 PF08538 DUF1749: Protein of u 98.6 3.8E-07 8.3E-12 92.7 11.0 200 515-726 32-283 (303)
143 COG4188 Predicted dienelactone 98.6 2.9E-07 6.3E-12 95.1 9.9 130 487-618 39-182 (365)
144 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 3.2E-05 6.9E-10 81.1 25.3 195 194-409 76-280 (300)
145 KOG0293 WD40 repeat-containing 98.5 1.1E-05 2.3E-10 82.7 19.9 191 193-408 227-425 (519)
146 PF10340 DUF2424: Protein of u 98.5 2.3E-06 4.9E-11 89.9 15.4 200 501-725 108-350 (374)
147 KOG0279 G protein beta subunit 98.5 3.1E-05 6.7E-10 75.8 21.8 193 191-409 64-263 (315)
148 PF07224 Chlorophyllase: Chlor 98.5 4.6E-07 9.9E-12 88.2 9.2 118 497-631 31-158 (307)
149 PRK13616 lipoprotein LpqB; Pro 98.5 7.8E-06 1.7E-10 92.9 20.8 159 192-365 351-529 (591)
150 cd00707 Pancreat_lipase_like P 98.5 4.5E-07 9.8E-12 93.9 9.9 112 513-629 33-146 (275)
151 COG2706 3-carboxymuconate cycl 98.5 0.00029 6.3E-09 71.9 28.3 259 193-469 42-329 (346)
152 PRK07868 acyl-CoA synthetase; 98.5 3.5E-06 7.6E-11 103.4 17.7 105 515-631 66-178 (994)
153 KOG2984 Predicted hydrolase [G 98.5 3.4E-07 7.3E-12 85.1 6.6 209 518-745 44-275 (277)
154 PF06821 Ser_hydrolase: Serine 98.5 2E-06 4.4E-11 81.9 12.2 162 519-735 1-164 (171)
155 KOG0293 WD40 repeat-containing 98.4 4.8E-06 1E-10 85.2 15.3 195 191-409 270-471 (519)
156 KOG0318 WD40 repeat stress pro 98.4 0.00028 6.1E-09 74.8 28.6 202 191-408 60-308 (603)
157 KOG2624 Triglyceride lipase-ch 98.4 3E-06 6.5E-11 90.7 14.5 143 480-630 42-199 (403)
158 COG4757 Predicted alpha/beta h 98.4 3E-06 6.5E-11 80.9 12.5 216 489-725 8-263 (281)
159 PRK11028 6-phosphogluconolacto 98.4 0.00021 4.5E-09 76.6 28.5 251 194-466 38-309 (330)
160 KOG2112 Lysophospholipase [Lip 98.4 3.8E-06 8.3E-11 79.7 12.7 188 516-745 3-203 (206)
161 KOG2564 Predicted acetyltransf 98.4 1.5E-06 3.2E-11 85.3 9.4 116 487-616 51-167 (343)
162 PF02897 Peptidase_S9_N: Proly 98.3 0.00036 7.8E-09 77.3 28.8 248 128-408 132-404 (414)
163 COG3571 Predicted hydrolase of 98.3 2.3E-05 5E-10 70.4 14.9 184 516-743 14-207 (213)
164 PF02273 Acyl_transf_2: Acyl t 98.3 1.8E-06 4E-11 83.1 8.5 217 491-729 7-242 (294)
165 TIGR01839 PHA_synth_II poly(R) 98.3 2E-05 4.3E-10 87.2 17.4 85 535-632 237-330 (560)
166 cd00200 WD40 WD40 domain, foun 98.3 0.00051 1.1E-08 70.3 26.9 192 192-409 11-208 (289)
167 COG2382 Fes Enterochelin ester 98.3 1E-05 2.2E-10 81.5 13.1 194 497-725 80-281 (299)
168 KOG0318 WD40 repeat stress pro 98.3 0.00013 2.9E-09 77.2 21.7 193 192-408 192-392 (603)
169 KOG2382 Predicted alpha/beta h 98.3 1.5E-05 3.2E-10 81.4 13.7 214 514-746 50-313 (315)
170 PF14583 Pectate_lyase22: Olig 98.3 0.00011 2.4E-09 77.2 20.6 174 174-363 179-383 (386)
171 KOG0266 WD40 repeat-containing 98.3 0.00021 4.6E-09 79.8 24.6 197 190-409 203-410 (456)
172 KOG0272 U4/U6 small nuclear ri 98.3 1.9E-05 4E-10 81.4 14.3 181 191-391 262-446 (459)
173 TIGR03230 lipo_lipase lipoprot 98.2 5.2E-06 1.1E-10 90.1 10.9 112 514-629 39-153 (442)
174 COG2021 MET2 Homoserine acetyl 98.2 2.6E-05 5.6E-10 80.7 15.0 204 515-726 50-350 (368)
175 PF10282 Lactonase: Lactonase, 98.2 0.00094 2E-08 71.9 28.0 259 193-469 39-330 (345)
176 PF10282 Lactonase: Lactonase, 98.2 0.0016 3.4E-08 70.2 29.6 203 195-412 91-326 (345)
177 PF08450 SGL: SMP-30/Gluconola 98.2 0.0013 2.8E-08 67.1 27.6 222 195-448 4-244 (246)
178 COG0596 MhpC Predicted hydrola 98.2 2.3E-05 4.9E-10 79.6 14.7 100 516-629 21-122 (282)
179 PTZ00421 coronin; Provisional 98.2 0.00041 8.9E-09 77.7 24.8 199 192-408 77-290 (493)
180 TIGR02658 TTQ_MADH_Hv methylam 98.2 0.00062 1.3E-08 72.0 24.5 192 195-409 109-331 (352)
181 KOG1553 Predicted alpha/beta h 98.2 1.3E-05 2.9E-10 80.5 10.8 133 487-634 215-349 (517)
182 PF02239 Cytochrom_D1: Cytochr 98.2 0.0035 7.6E-08 67.7 30.5 255 193-466 39-305 (369)
183 PF09752 DUF2048: Uncharacteri 98.1 0.00013 2.9E-09 75.5 18.1 123 501-628 79-208 (348)
184 COG4946 Uncharacterized protei 98.1 0.00011 2.3E-09 76.9 17.1 124 218-350 383-510 (668)
185 COG3208 GrsT Predicted thioest 98.1 3E-05 6.4E-10 75.8 12.4 198 514-748 6-234 (244)
186 KOG0291 WD40-repeat-containing 98.1 0.00027 5.9E-09 78.0 20.9 197 190-409 350-551 (893)
187 COG2819 Predicted hydrolase of 98.1 0.00013 2.8E-09 72.6 16.6 46 585-630 127-172 (264)
188 TIGR02658 TTQ_MADH_Hv methylam 98.1 0.0081 1.7E-07 63.7 30.8 116 201-320 11-139 (352)
189 COG2706 3-carboxymuconate cycl 98.1 0.01 2.2E-07 61.0 29.9 245 217-475 16-288 (346)
190 KOG0315 G-protein beta subunit 98.1 0.00023 5.1E-09 68.6 17.1 199 192-409 42-289 (311)
191 KOG2314 Translation initiation 98.1 0.00052 1.1E-08 73.3 21.1 235 193-451 308-559 (698)
192 KOG0291 WD40-repeat-containing 98.1 0.003 6.4E-08 70.1 27.2 241 191-465 308-552 (893)
193 PTZ00420 coronin; Provisional 98.1 0.015 3.3E-07 65.9 34.0 199 197-409 33-249 (568)
194 PF08662 eIF2A: Eukaryotic tra 98.1 0.00013 2.9E-09 71.3 15.6 101 193-304 62-163 (194)
195 cd00200 WD40 WD40 domain, foun 98.1 0.0012 2.5E-08 67.7 23.5 193 193-409 54-250 (289)
196 PRK11028 6-phosphogluconolacto 98.0 0.011 2.4E-07 63.2 30.9 188 205-409 3-206 (330)
197 KOG0271 Notchless-like WD40 re 98.0 0.00076 1.6E-08 68.9 19.9 120 193-328 118-246 (480)
198 PF11339 DUF3141: Protein of u 98.0 0.0004 8.6E-09 74.7 18.6 103 514-631 67-177 (581)
199 PRK13616 lipoprotein LpqB; Pro 98.0 0.00015 3.1E-09 82.7 16.2 116 193-320 399-530 (591)
200 PF03959 FSH1: Serine hydrolas 97.9 1.6E-05 3.5E-10 79.1 6.5 167 515-728 3-205 (212)
201 COG1073 Hydrolases of the alph 97.9 8.1E-05 1.7E-09 78.0 12.2 237 497-747 31-298 (299)
202 TIGR03502 lipase_Pla1_cef extr 97.9 5.4E-05 1.2E-09 87.5 11.0 99 515-615 448-575 (792)
203 KOG2551 Phospholipase/carboxyh 97.9 0.00052 1.1E-08 65.9 15.7 184 515-747 4-221 (230)
204 KOG1407 WD40 repeat protein [F 97.9 0.0017 3.7E-08 63.3 19.0 177 195-394 111-289 (313)
205 PTZ00420 coronin; Provisional 97.9 0.0029 6.3E-08 71.6 24.0 158 192-363 127-293 (568)
206 KOG0271 Notchless-like WD40 re 97.9 0.0037 8.1E-08 64.0 21.8 65 176-245 139-210 (480)
207 KOG2055 WD40 repeat protein [G 97.9 0.00024 5.2E-09 74.2 13.6 199 191-407 304-511 (514)
208 KOG4497 Uncharacterized conser 97.8 0.00025 5.4E-09 71.0 12.9 138 196-350 14-155 (447)
209 PF11144 DUF2920: Protein of u 97.8 0.00033 7.1E-09 74.1 14.5 176 576-755 163-376 (403)
210 KOG0263 Transcription initiati 97.8 0.00057 1.2E-08 76.0 16.5 194 192-408 453-649 (707)
211 KOG0279 G protein beta subunit 97.8 0.035 7.6E-07 55.0 26.6 197 192-409 17-223 (315)
212 COG3545 Predicted esterase of 97.8 0.00044 9.6E-09 64.0 12.9 122 570-726 37-158 (181)
213 PF05677 DUF818: Chlamydia CHL 97.8 0.00026 5.6E-09 72.5 12.3 119 485-616 111-236 (365)
214 KOG0266 WD40 repeat-containing 97.8 0.0027 5.8E-08 71.1 21.8 197 191-409 160-365 (456)
215 KOG2139 WD40 repeat protein [G 97.8 0.00036 7.9E-09 70.8 12.7 104 189-305 194-301 (445)
216 KOG0272 U4/U6 small nuclear ri 97.7 0.00035 7.6E-09 72.2 12.5 192 192-408 219-418 (459)
217 PF06057 VirJ: Bacterial virul 97.7 0.00027 5.9E-09 66.9 10.8 155 537-731 21-180 (192)
218 PTZ00421 coronin; Provisional 97.7 0.0065 1.4E-07 68.1 23.6 159 192-364 127-291 (493)
219 PF06028 DUF915: Alpha/beta hy 97.7 0.00064 1.4E-08 68.8 13.3 209 518-743 13-252 (255)
220 PRK10115 protease 2; Provision 97.7 0.025 5.3E-07 66.5 28.0 204 128-364 135-347 (686)
221 COG5354 Uncharacterized protei 97.6 0.0046 9.9E-08 65.8 19.1 215 174-408 117-348 (561)
222 COG3386 Gluconolactonase [Carb 97.6 0.015 3.4E-07 60.7 23.2 242 195-466 29-291 (307)
223 KOG0275 Conserved WD40 repeat- 97.6 0.0011 2.4E-08 66.1 13.6 197 193-414 216-427 (508)
224 KOG1446 Histone H3 (Lys4) meth 97.6 0.0092 2E-07 59.9 20.0 156 192-365 102-264 (311)
225 KOG0645 WD40 repeat protein [G 97.6 0.013 2.7E-07 57.8 20.3 156 191-362 62-228 (312)
226 KOG1516 Carboxylesterase and r 97.6 9.5E-05 2.1E-09 85.1 7.2 130 493-629 93-231 (545)
227 KOG0772 Uncharacterized conser 97.6 0.025 5.5E-07 60.3 23.8 257 182-465 159-447 (641)
228 PF02239 Cytochrom_D1: Cytochr 97.6 0.01 2.2E-07 64.2 22.0 175 218-408 17-202 (369)
229 KOG1273 WD40 repeat protein [G 97.6 0.013 2.9E-07 58.7 20.4 186 195-408 28-226 (405)
230 PLN00181 protein SPA1-RELATED; 97.6 0.035 7.7E-07 67.0 28.8 193 192-409 485-691 (793)
231 PF05577 Peptidase_S28: Serine 97.6 0.0003 6.5E-09 78.4 9.8 115 516-631 29-149 (434)
232 KOG1407 WD40 repeat protein [F 97.5 0.017 3.7E-07 56.6 19.9 226 192-451 66-294 (313)
233 PF12146 Hydrolase_4: Putative 97.5 0.00025 5.5E-09 57.9 6.4 77 496-586 1-77 (79)
234 KOG0645 WD40 repeat protein [G 97.5 0.033 7.2E-07 54.9 21.0 153 192-361 16-180 (312)
235 KOG2096 WD40 repeat protein [G 97.4 0.026 5.6E-07 56.8 20.2 208 179-408 77-308 (420)
236 KOG0296 Angio-associated migra 97.4 0.041 8.8E-07 56.4 21.8 119 192-326 108-229 (399)
237 KOG0650 WD40 repeat nucleolar 97.4 0.0056 1.2E-07 66.3 15.9 202 192-412 402-641 (733)
238 PF10142 PhoPQ_related: PhoPQ- 97.4 0.02 4.2E-07 61.0 19.9 154 584-750 161-324 (367)
239 KOG0973 Histone transcription 97.4 0.0035 7.7E-08 72.4 15.2 142 191-348 70-239 (942)
240 PRK04940 hypothetical protein; 97.4 0.0036 7.9E-08 59.2 12.9 118 595-744 60-178 (180)
241 TIGR01849 PHB_depoly_PhaZ poly 97.3 0.0057 1.2E-07 66.0 15.4 85 536-632 121-210 (406)
242 KOG0277 Peroxisomal targeting 97.3 0.011 2.4E-07 57.6 15.4 196 195-408 13-221 (311)
243 KOG0296 Angio-associated migra 97.3 0.092 2E-06 54.0 22.3 153 192-364 66-221 (399)
244 KOG0305 Anaphase promoting com 97.3 0.053 1.1E-06 59.4 22.0 246 178-460 168-418 (484)
245 PF10647 Gmad1: Lipoprotein Lp 97.2 0.034 7.3E-07 56.9 19.4 152 192-350 25-186 (253)
246 KOG2139 WD40 repeat protein [G 97.2 0.049 1.1E-06 55.8 19.7 197 191-408 99-311 (445)
247 PRK02888 nitrous-oxide reducta 97.2 0.058 1.3E-06 60.6 21.7 147 197-364 199-352 (635)
248 KOG4497 Uncharacterized conser 97.2 0.035 7.5E-07 56.1 17.8 55 191-249 92-147 (447)
249 TIGR02171 Fb_sc_TIGR02171 Fibr 97.1 0.036 7.8E-07 64.3 20.0 119 202-328 318-453 (912)
250 KOG0263 Transcription initiati 97.1 0.036 7.7E-07 62.2 19.0 232 192-458 380-646 (707)
251 KOG0286 G-protein beta subunit 97.1 0.21 4.4E-06 50.1 22.0 193 193-409 58-260 (343)
252 PF06977 SdiA-regulated: SdiA- 97.0 0.33 7.2E-06 49.1 24.1 207 174-397 7-241 (248)
253 KOG0973 Histone transcription 97.0 0.016 3.4E-07 67.3 15.9 205 189-407 12-252 (942)
254 COG4947 Uncharacterized protei 97.0 0.00048 1.1E-08 62.7 2.9 114 583-714 91-208 (227)
255 KOG0643 Translation initiation 97.0 0.088 1.9E-06 51.9 18.2 189 192-395 54-251 (327)
256 KOG1274 WD40 repeat protein [G 97.0 0.035 7.6E-07 63.4 17.7 165 174-363 87-262 (933)
257 KOG2055 WD40 repeat protein [G 97.0 0.081 1.8E-06 55.9 19.0 211 176-408 201-417 (514)
258 COG3243 PhaC Poly(3-hydroxyalk 96.9 0.014 2.9E-07 61.8 13.1 89 535-631 129-218 (445)
259 KOG0289 mRNA splicing factor [ 96.9 0.12 2.6E-06 54.3 19.4 151 193-363 306-462 (506)
260 COG1770 PtrB Protease II [Amin 96.8 1.2 2.6E-05 50.1 29.3 162 239-409 132-301 (682)
261 KOG3253 Predicted alpha/beta h 96.8 0.0087 1.9E-07 65.3 11.2 165 515-725 175-346 (784)
262 PF06433 Me-amine-dh_H: Methyl 96.8 0.54 1.2E-05 49.1 23.8 246 194-466 39-323 (342)
263 PTZ00472 serine carboxypeptida 96.8 0.0074 1.6E-07 67.2 11.2 132 496-633 60-219 (462)
264 KOG2315 Predicted translation 96.8 0.13 2.7E-06 55.9 19.5 230 195-451 130-376 (566)
265 KOG2048 WD40 repeat protein [G 96.8 0.061 1.3E-06 59.5 17.3 157 190-364 382-549 (691)
266 PF00450 Peptidase_S10: Serine 96.8 0.016 3.5E-07 64.2 13.6 141 489-633 16-184 (415)
267 KOG1273 WD40 repeat protein [G 96.8 0.2 4.3E-06 50.6 19.2 160 174-349 45-217 (405)
268 KOG2314 Translation initiation 96.8 0.059 1.3E-06 58.2 16.3 164 192-363 348-525 (698)
269 KOG0273 Beta-transducin family 96.7 0.3 6.6E-06 51.9 21.2 151 191-361 236-389 (524)
270 PF07676 PD40: WD40-like Beta 96.7 0.0025 5.4E-08 44.1 4.3 29 193-221 11-39 (39)
271 PF06433 Me-amine-dh_H: Methyl 96.7 0.37 8E-06 50.3 21.7 201 193-409 97-321 (342)
272 KOG2237 Predicted serine prote 96.7 0.04 8.7E-07 61.0 15.2 83 172-255 106-190 (712)
273 KOG2315 Predicted translation 96.7 0.096 2.1E-06 56.8 17.7 141 195-349 222-375 (566)
274 KOG0305 Anaphase promoting com 96.7 0.05 1.1E-06 59.6 15.9 153 192-360 303-460 (484)
275 KOG0283 WD40 repeat-containing 96.7 0.21 4.6E-06 56.7 21.0 148 240-408 374-532 (712)
276 KOG0315 G-protein beta subunit 96.7 0.23 5E-06 48.6 18.3 176 216-409 19-198 (311)
277 PF00151 Lipase: Lipase; Inte 96.6 0.0021 4.5E-08 68.1 4.8 110 513-626 68-183 (331)
278 KOG0273 Beta-transducin family 96.6 0.23 5.1E-06 52.7 19.4 226 192-449 278-513 (524)
279 KOG0275 Conserved WD40 repeat- 96.6 0.0075 1.6E-07 60.3 8.1 105 193-312 266-375 (508)
280 COG3150 Predicted esterase [Ge 96.6 0.051 1.1E-06 49.9 12.4 126 577-725 43-172 (191)
281 COG4814 Uncharacterized protei 96.5 0.052 1.1E-06 53.4 13.1 206 515-735 45-279 (288)
282 PF08450 SGL: SMP-30/Gluconola 96.5 0.26 5.5E-06 50.2 19.4 151 189-348 84-245 (246)
283 PLN00181 protein SPA1-RELATED; 96.5 0.75 1.6E-05 55.6 26.4 191 193-408 535-738 (793)
284 KOG2183 Prolylcarboxypeptidase 96.5 0.0096 2.1E-07 62.3 8.5 130 497-630 63-203 (492)
285 KOG0639 Transducin-like enhanc 96.5 0.077 1.7E-06 56.5 15.1 189 192-408 467-663 (705)
286 PF01674 Lipase_2: Lipase (cla 96.5 0.0086 1.9E-07 59.2 7.7 89 519-615 4-95 (219)
287 PF07819 PGAP1: PGAP1-like pro 96.4 0.021 4.5E-07 57.2 9.9 100 517-625 5-118 (225)
288 KOG2931 Differentiation-relate 96.4 0.42 9.1E-06 48.3 18.5 130 486-628 22-155 (326)
289 KOG1445 Tumor-specific antigen 96.3 0.014 2.9E-07 63.6 8.6 134 216-362 699-843 (1012)
290 COG3391 Uncharacterized conser 96.3 0.75 1.6E-05 50.2 22.4 200 193-408 76-283 (381)
291 KOG1274 WD40 repeat protein [G 96.3 1.2 2.6E-05 51.4 23.7 191 194-408 17-218 (933)
292 KOG1446 Histone H3 (Lys4) meth 96.3 1.6 3.4E-05 44.4 29.4 242 192-467 16-266 (311)
293 PF05990 DUF900: Alpha/beta hy 96.3 0.017 3.7E-07 58.2 8.6 112 514-631 16-138 (233)
294 PLN02733 phosphatidylcholine-s 96.3 0.0054 1.2E-07 67.3 5.4 88 532-628 108-199 (440)
295 KOG0771 Prolactin regulatory e 96.3 0.12 2.5E-06 54.2 14.6 177 194-388 148-335 (398)
296 PF10230 DUF2305: Uncharacteri 96.3 0.021 4.5E-07 58.8 9.4 110 516-629 2-121 (266)
297 KOG2096 WD40 repeat protein [G 96.2 0.043 9.3E-07 55.2 10.8 140 195-346 233-391 (420)
298 KOG0282 mRNA splicing factor [ 96.1 0.065 1.4E-06 57.0 12.0 71 192-271 260-332 (503)
299 KOG0772 Uncharacterized conser 96.1 0.17 3.6E-06 54.4 14.7 162 191-364 269-446 (641)
300 KOG0268 Sof1-like rRNA process 96.1 0.035 7.6E-07 56.9 9.4 169 177-362 170-346 (433)
301 TIGR02171 Fb_sc_TIGR02171 Fibr 96.0 0.11 2.4E-06 60.4 14.5 79 192-271 351-442 (912)
302 PF07433 DUF1513: Protein of u 96.0 2.3 5E-05 44.0 22.6 120 195-320 9-149 (305)
303 KOG4840 Predicted hydrolases o 96.0 0.035 7.5E-07 53.2 8.4 106 517-633 37-147 (299)
304 KOG0306 WD40-repeat-containing 96.0 0.42 9.2E-06 53.8 17.8 184 196-399 418-615 (888)
305 KOG0265 U5 snRNP-specific prot 96.0 2.1 4.6E-05 43.2 21.0 115 192-320 49-166 (338)
306 KOG0289 mRNA splicing factor [ 95.9 0.26 5.6E-06 51.9 15.0 118 192-325 349-469 (506)
307 KOG2919 Guanine nucleotide-bin 95.9 0.46 9.9E-06 48.3 16.1 147 199-364 120-282 (406)
308 PF07433 DUF1513: Protein of u 95.9 2.3 4.9E-05 44.0 21.6 63 189-251 49-115 (305)
309 KOG1063 RNA polymerase II elon 95.8 0.06 1.3E-06 59.7 10.6 120 187-315 523-648 (764)
310 KOG4389 Acetylcholinesterase/B 95.8 0.011 2.3E-07 63.2 4.8 112 518-631 137-256 (601)
311 PLN02919 haloacid dehalogenase 95.8 2.1 4.5E-05 53.0 25.3 196 193-409 626-889 (1057)
312 KOG0639 Transducin-like enhanc 95.8 0.1 2.2E-06 55.7 11.6 146 195-362 514-664 (705)
313 KOG0771 Prolactin regulatory e 95.8 0.22 4.8E-06 52.2 14.0 157 191-362 187-355 (398)
314 KOG0286 G-protein beta subunit 95.7 2.6 5.6E-05 42.5 27.3 169 173-360 76-258 (343)
315 PF04762 IKI3: IKI3 family; I 95.7 2.9 6.2E-05 50.9 25.5 187 192-389 77-316 (928)
316 KOG0316 Conserved WD40 repeat- 95.7 1 2.3E-05 43.8 17.2 157 193-364 62-258 (307)
317 KOG0303 Actin-binding protein 95.7 0.8 1.7E-05 47.8 17.3 111 194-320 85-206 (472)
318 COG5354 Uncharacterized protei 95.7 0.25 5.3E-06 53.2 14.1 143 195-348 227-379 (561)
319 KOG0264 Nucleosome remodeling 95.5 0.76 1.6E-05 48.7 16.9 196 196-408 183-404 (422)
320 PF07519 Tannase: Tannase and 95.5 0.067 1.5E-06 59.7 10.0 131 498-634 16-154 (474)
321 PLN02919 haloacid dehalogenase 95.5 9.7 0.00021 47.4 30.4 154 194-364 571-771 (1057)
322 KOG0282 mRNA splicing factor [ 95.5 0.17 3.7E-06 53.9 12.0 150 192-362 216-373 (503)
323 KOG3967 Uncharacterized conser 95.4 0.19 4.1E-06 48.0 10.9 109 502-618 89-213 (297)
324 KOG1445 Tumor-specific antigen 95.4 0.17 3.7E-06 55.5 11.9 197 191-408 628-844 (1012)
325 COG3204 Uncharacterized protei 95.4 3.2 7E-05 42.2 19.9 175 174-364 71-264 (316)
326 PF05705 DUF829: Eukaryotic pr 95.3 0.13 2.8E-06 52.1 10.6 46 676-725 178-223 (240)
327 KOG0310 Conserved WD40 repeat- 95.2 2.7 5.9E-05 45.2 19.8 199 190-413 26-230 (487)
328 KOG2394 WD40 protein DMR-N9 [G 95.2 0.061 1.3E-06 57.9 7.7 58 192-254 292-351 (636)
329 KOG0310 Conserved WD40 repeat- 95.1 2.7 5.8E-05 45.3 19.5 223 193-451 71-301 (487)
330 PF00975 Thioesterase: Thioest 95.0 0.059 1.3E-06 54.1 7.1 96 518-627 2-101 (229)
331 KOG0278 Serine/threonine kinas 95.0 0.92 2E-05 44.5 14.4 185 192-403 102-294 (334)
332 KOG2182 Hydrolytic enzymes of 95.0 0.11 2.4E-06 56.1 9.2 116 515-630 85-207 (514)
333 PF07082 DUF1350: Protein of u 94.9 0.19 4.1E-06 49.9 10.0 166 518-708 18-191 (250)
334 PF07676 PD40: WD40-like Beta 94.9 0.06 1.3E-06 37.1 4.8 27 287-313 11-39 (39)
335 KOG0284 Polyadenylation factor 94.9 0.51 1.1E-05 49.4 13.3 196 191-408 139-337 (464)
336 KOG0283 WD40 repeat-containing 94.9 1.2 2.5E-05 51.0 17.0 191 192-408 371-576 (712)
337 KOG0306 WD40-repeat-containing 94.8 1 2.2E-05 50.9 15.9 193 192-408 456-664 (888)
338 KOG4388 Hormone-sensitive lipa 94.7 0.084 1.8E-06 57.5 7.4 86 515-612 395-486 (880)
339 KOG0640 mRNA cleavage stimulat 94.7 0.87 1.9E-05 46.0 13.7 193 194-409 116-336 (430)
340 COG3391 Uncharacterized conser 94.7 1.9 4.2E-05 47.0 18.2 158 194-364 119-284 (381)
341 PF10647 Gmad1: Lipoprotein Lp 94.6 5.5 0.00012 40.7 20.3 159 238-408 26-197 (253)
342 PLN02209 serine carboxypeptida 94.6 0.19 4E-06 55.5 10.1 133 495-632 50-214 (437)
343 KOG2110 Uncharacterized conser 94.6 1.7 3.6E-05 45.2 15.8 134 218-362 107-249 (391)
344 KOG0319 WD40-repeat-containing 94.6 2 4.4E-05 48.5 17.7 194 190-408 192-395 (775)
345 COG3490 Uncharacterized protei 94.6 5.9 0.00013 40.1 20.8 131 197-347 42-180 (366)
346 KOG0646 WD40 repeat protein [G 94.6 2.8 6.1E-05 44.8 17.9 58 193-256 84-144 (476)
347 PF08386 Abhydrolase_4: TAP-li 94.5 0.085 1.9E-06 45.6 5.7 58 678-744 35-92 (103)
348 KOG2110 Uncharacterized conser 94.5 7.3 0.00016 40.7 20.8 187 203-409 57-249 (391)
349 PF12048 DUF3530: Protein of u 94.4 1.4 3.1E-05 46.3 15.9 135 487-629 63-228 (310)
350 KOG4378 Nuclear protein COP1 [ 94.3 2.1 4.6E-05 46.1 16.3 122 192-327 166-291 (673)
351 COG3386 Gluconolactonase [Carb 94.3 1.6 3.4E-05 45.8 15.7 152 191-350 111-277 (307)
352 PF11187 DUF2974: Protein of u 94.3 0.1 2.2E-06 52.0 6.4 74 552-626 42-119 (224)
353 KOG0313 Microtubule binding pr 94.2 4.2 9.1E-05 42.5 17.8 190 191-406 194-416 (423)
354 PLN03016 sinapoylglucose-malat 94.1 0.17 3.7E-06 55.8 8.5 132 496-633 49-213 (433)
355 KOG0295 WD40 repeat-containing 94.0 2.1 4.5E-05 44.4 15.1 117 192-320 237-367 (406)
356 KOG0307 Vesicle coat complex C 94.0 0.45 9.8E-06 56.0 11.8 176 173-364 89-285 (1049)
357 KOG0643 Translation initiation 93.9 2.1 4.5E-05 42.7 14.2 119 191-320 94-223 (327)
358 KOG0288 WD40 repeat protein Ti 93.8 0.33 7.1E-06 50.8 9.2 100 192-302 343-449 (459)
359 KOG0647 mRNA export protein (c 93.8 8.8 0.00019 39.1 19.6 195 192-408 29-228 (347)
360 KOG2048 WD40 repeat protein [G 93.7 13 0.00029 41.8 21.5 151 193-364 28-185 (691)
361 KOG1007 WD repeat protein TSSC 93.7 2.3 4.9E-05 42.8 14.2 142 192-349 125-279 (370)
362 KOG1282 Serine carboxypeptidas 93.6 0.42 9.1E-06 52.5 10.2 141 489-632 49-215 (454)
363 COG1506 DAP2 Dipeptidyl aminop 93.6 2 4.4E-05 50.1 16.6 100 191-301 13-117 (620)
364 KOG1920 IkappaB kinase complex 93.5 6.1 0.00013 47.5 19.7 205 192-407 70-321 (1265)
365 PF03096 Ndr: Ndr family; Int 93.5 0.2 4.3E-06 51.1 6.9 235 492-749 5-281 (283)
366 KOG0640 mRNA cleavage stimulat 93.4 3.6 7.8E-05 41.7 15.2 117 190-320 216-338 (430)
367 COG4782 Uncharacterized protei 93.3 0.22 4.8E-06 51.9 7.1 108 515-631 115-235 (377)
368 KOG0278 Serine/threonine kinas 93.3 2.3 4.9E-05 41.9 13.3 118 192-317 145-299 (334)
369 KOG0319 WD40-repeat-containing 93.2 3.3 7.2E-05 46.8 16.0 155 191-364 20-180 (775)
370 KOG1009 Chromatin assembly com 93.1 3 6.5E-05 43.9 14.6 106 193-303 126-249 (434)
371 KOG0277 Peroxisomal targeting 93.0 10 0.00022 37.6 18.8 164 239-412 12-182 (311)
372 KOG1539 WD repeat protein [Gen 92.8 0.42 9.1E-06 54.4 8.7 57 192-253 578-635 (910)
373 KOG1538 Uncharacterized conser 92.7 2.9 6.2E-05 46.7 14.6 54 190-250 12-68 (1081)
374 KOG0641 WD40 repeat protein [G 92.5 11 0.00023 36.6 24.7 208 174-408 77-303 (350)
375 PF04762 IKI3: IKI3 family; I 92.5 6 0.00013 48.3 18.6 107 195-304 214-324 (928)
376 PF05057 DUF676: Putative seri 92.4 0.15 3.1E-06 50.9 4.2 22 594-615 77-98 (217)
377 KOG2106 Uncharacterized conser 92.3 2 4.3E-05 46.4 12.4 93 197-301 414-508 (626)
378 KOG0302 Ribosome Assembly prot 92.2 12 0.00025 39.3 17.4 152 195-362 216-377 (440)
379 KOG0313 Microtubule binding pr 92.2 4.7 0.0001 42.1 14.6 114 191-315 261-376 (423)
380 KOG2541 Palmitoyl protein thio 92.2 2 4.4E-05 43.0 11.5 91 516-618 24-115 (296)
381 PF03283 PAE: Pectinacetyleste 91.9 0.097 2.1E-06 56.1 2.4 37 577-613 138-174 (361)
382 COG3319 Thioesterase domains o 91.8 0.49 1.1E-05 48.0 7.2 85 517-615 1-85 (257)
383 KOG1009 Chromatin assembly com 91.8 3.4 7.4E-05 43.5 13.1 104 190-306 65-187 (434)
384 KOG1408 WD40 repeat protein [F 91.7 9.4 0.0002 43.3 17.1 107 289-409 601-714 (1080)
385 KOG0288 WD40 repeat protein Ti 91.7 3 6.5E-05 44.0 12.7 124 213-347 318-450 (459)
386 KOG0290 Conserved WD40 repeat- 91.7 7.4 0.00016 39.4 14.8 157 192-364 152-319 (364)
387 KOG1524 WD40 repeat-containing 91.7 0.83 1.8E-05 49.5 8.8 87 193-304 189-276 (737)
388 KOG0284 Polyadenylation factor 91.7 2.8 6.1E-05 44.1 12.4 193 191-403 181-377 (464)
389 KOG0303 Actin-binding protein 91.6 7.1 0.00015 41.1 15.1 142 192-347 133-282 (472)
390 PRK13613 lipoprotein LpqB; Pro 91.5 16 0.00034 42.2 19.6 165 192-366 364-542 (599)
391 KOG1408 WD40 repeat protein [F 91.3 1.3 2.9E-05 49.6 10.2 113 192-318 80-197 (1080)
392 KOG2919 Guanine nucleotide-bin 91.3 5.8 0.00013 40.6 13.8 158 189-367 157-331 (406)
393 KOG1524 WD40 repeat-containing 91.1 2.4 5.2E-05 46.1 11.5 58 192-255 106-166 (737)
394 COG1075 LipA Predicted acetylt 90.5 0.7 1.5E-05 49.3 7.3 97 518-628 61-162 (336)
395 KOG0285 Pleiotropic regulator 90.5 24 0.00053 36.8 21.1 57 192-254 153-212 (460)
396 PF13360 PQQ_2: PQQ-like domai 90.5 20 0.00043 35.7 20.5 185 199-409 33-231 (238)
397 KOG0294 WD40 repeat-containing 90.2 24 0.00053 36.2 18.8 138 192-349 45-189 (362)
398 PRK10252 entF enterobactin syn 90.2 1.1 2.3E-05 57.7 9.9 99 516-628 1068-1169(1296)
399 PF04053 Coatomer_WDAD: Coatom 90.0 3.9 8.4E-05 45.3 12.7 180 174-388 18-207 (443)
400 KOG3975 Uncharacterized conser 90.0 4.4 9.6E-05 40.2 11.3 133 495-632 9-150 (301)
401 KOG1539 WD repeat protein [Gen 89.8 1.6 3.4E-05 50.0 9.3 80 215-303 554-636 (910)
402 KOG2565 Predicted hydrolases o 89.8 1.3 2.7E-05 46.4 7.9 117 495-623 132-257 (469)
403 PF02450 LCAT: Lecithin:choles 89.7 0.85 1.8E-05 49.8 7.3 87 533-628 66-158 (389)
404 KOG4328 WD40 protein [Function 89.4 10 0.00022 40.8 14.2 196 191-407 187-398 (498)
405 KOG0290 Conserved WD40 repeat- 89.2 27 0.00059 35.5 17.2 238 192-448 46-306 (364)
406 PF04083 Abhydro_lipase: Parti 88.8 1.1 2.5E-05 34.5 5.3 50 482-531 8-58 (63)
407 KOG1920 IkappaB kinase complex 88.8 24 0.00052 42.8 18.1 121 195-318 200-323 (1265)
408 KOG0265 U5 snRNP-specific prot 88.5 13 0.00028 37.8 13.6 141 190-344 174-324 (338)
409 KOG0264 Nucleosome remodeling 88.4 40 0.00086 36.3 21.2 144 289-446 182-333 (422)
410 PF01764 Lipase_3: Lipase (cla 88.3 0.92 2E-05 41.4 5.5 38 576-615 47-84 (140)
411 KOG2394 WD40 protein DMR-N9 [G 88.2 3.5 7.5E-05 45.0 10.1 54 289-346 295-350 (636)
412 KOG4227 WD40 repeat protein [G 88.2 10 0.00023 39.6 13.1 146 191-350 57-216 (609)
413 KOG0295 WD40 repeat-containing 88.2 32 0.0007 36.0 16.5 111 192-316 152-266 (406)
414 PRK02888 nitrous-oxide reducta 88.0 28 0.00061 39.8 17.5 160 289-464 239-405 (635)
415 PF02089 Palm_thioest: Palmito 87.8 2.4 5.3E-05 43.3 8.4 105 513-626 3-112 (279)
416 KOG4378 Nuclear protein COP1 [ 87.7 45 0.00097 36.5 17.6 155 192-364 123-281 (673)
417 TIGR03712 acc_sec_asp2 accesso 87.6 12 0.00026 41.0 13.8 116 494-634 273-394 (511)
418 PF11768 DUF3312: Protein of u 87.3 8.3 0.00018 42.9 12.6 85 193-286 262-346 (545)
419 PF07519 Tannase: Tannase and 87.3 0.79 1.7E-05 51.3 5.1 67 679-745 355-426 (474)
420 TIGR02604 Piru_Ver_Nterm putat 87.2 22 0.00048 38.5 16.2 101 238-348 74-202 (367)
421 KOG0641 WD40 repeat protein [G 87.1 13 0.00029 35.9 12.3 112 190-314 231-348 (350)
422 KOG4283 Transcription-coupled 86.9 39 0.00084 34.5 18.2 98 213-317 120-221 (397)
423 PRK13614 lipoprotein LpqB; Pro 86.8 33 0.00071 39.3 17.5 161 192-364 344-519 (573)
424 KOG0299 U3 snoRNP-associated p 86.6 39 0.00085 36.5 16.5 110 287-408 205-316 (479)
425 KOG0268 Sof1-like rRNA process 86.6 1.6 3.5E-05 45.1 6.3 141 174-329 210-357 (433)
426 KOG0269 WD40 repeat-containing 86.5 24 0.00053 40.5 15.8 197 174-387 110-319 (839)
427 PF15492 Nbas_N: Neuroblastoma 85.9 43 0.00093 34.1 16.6 33 193-230 46-78 (282)
428 KOG0299 U3 snoRNP-associated p 85.9 33 0.0007 37.1 15.5 60 192-256 204-266 (479)
429 KOG0269 WD40 repeat-containing 85.7 9.3 0.0002 43.7 12.0 119 192-320 178-299 (839)
430 cd00741 Lipase Lipase. Lipase 85.4 1.2 2.6E-05 41.4 4.6 39 577-617 12-50 (153)
431 PF05096 Glu_cyclase_2: Glutam 85.3 46 0.00099 33.9 19.9 162 283-467 43-207 (264)
432 KOG1523 Actin-related protein 85.1 8.4 0.00018 39.5 10.3 130 175-320 93-239 (361)
433 PF07995 GSDH: Glucose / Sorbo 85.1 57 0.0012 34.7 18.7 117 194-318 5-157 (331)
434 KOG2321 WD40 repeat protein [G 84.6 58 0.0013 36.3 17.0 30 194-227 55-84 (703)
435 PF05694 SBP56: 56kDa selenium 84.3 7.9 0.00017 41.9 10.4 128 217-349 222-394 (461)
436 KOG0302 Ribosome Assembly prot 84.3 5.9 0.00013 41.4 9.0 127 179-316 248-379 (440)
437 KOG0270 WD40 repeat-containing 83.9 66 0.0014 34.7 16.6 151 241-408 249-404 (463)
438 KOG0294 WD40 repeat-containing 83.9 41 0.00088 34.7 14.5 68 192-270 129-198 (362)
439 PF03088 Str_synth: Strictosid 83.6 13 0.00029 30.9 9.4 70 290-364 3-88 (89)
440 PLN02633 palmitoyl protein thi 83.5 10 0.00022 39.4 10.4 101 514-626 24-127 (314)
441 KOG0307 Vesicle coat complex C 83.3 8.3 0.00018 46.0 10.8 199 192-409 66-285 (1049)
442 KOG4328 WD40 protein [Function 83.2 74 0.0016 34.5 17.6 140 192-342 236-383 (498)
443 PLN02606 palmitoyl-protein thi 83.0 10 0.00022 39.3 10.2 100 514-625 25-127 (306)
444 KOG4499 Ca2+-binding protein R 82.7 29 0.00064 34.2 12.5 118 193-320 111-244 (310)
445 COG2939 Carboxypeptidase C (ca 82.0 3.5 7.7E-05 45.2 6.9 117 514-633 99-246 (498)
446 PF06259 Abhydrolase_8: Alpha/ 81.7 3.8 8.3E-05 39.1 6.3 39 578-617 93-131 (177)
447 PRK13615 lipoprotein LpqB; Pro 81.3 1.1E+02 0.0023 35.1 18.5 157 193-365 336-504 (557)
448 KOG0281 Beta-TrCP (transducin 81.2 14 0.0003 38.3 10.2 176 212-409 252-429 (499)
449 KOG3724 Negative regulator of 80.8 1.6 3.5E-05 50.0 3.9 46 577-623 157-209 (973)
450 PLN02454 triacylglycerol lipas 80.1 2.8 6E-05 45.4 5.2 40 575-614 208-247 (414)
451 KOG1332 Vesicle coat complex C 79.5 17 0.00037 36.0 9.8 123 192-325 151-294 (299)
452 PF11288 DUF3089: Protein of u 79.4 3.6 7.8E-05 40.1 5.4 58 573-631 74-138 (207)
453 KOG0647 mRNA export protein (c 78.2 87 0.0019 32.2 14.8 127 289-432 32-162 (347)
454 PLN02408 phospholipase A1 77.8 3.4 7.3E-05 44.1 5.0 39 577-615 182-220 (365)
455 TIGR03606 non_repeat_PQQ dehyd 77.7 80 0.0017 35.1 15.7 107 239-350 33-166 (454)
456 cd00519 Lipase_3 Lipase (class 77.5 4.1 9E-05 40.8 5.5 37 577-615 112-148 (229)
457 COG5276 Uncharacterized conser 76.5 97 0.0021 31.9 15.5 106 289-408 91-199 (370)
458 PLN02571 triacylglycerol lipas 75.7 4.1 8.9E-05 44.1 5.0 40 575-614 206-245 (413)
459 KOG0650 WD40 repeat nucleolar 75.1 46 0.001 37.3 12.6 113 192-319 523-639 (733)
460 PLN02517 phosphatidylcholine-s 75.0 3.9 8.4E-05 46.0 4.7 75 534-615 158-233 (642)
461 KOG0276 Vesicle coat complex C 74.8 1.1E+02 0.0024 34.7 15.3 187 197-401 62-252 (794)
462 COG3946 VirJ Type IV secretory 74.1 7.9 0.00017 41.3 6.4 76 537-624 279-355 (456)
463 KOG0646 WD40 repeat protein [G 73.8 1.3E+02 0.0027 32.9 15.1 177 216-409 17-207 (476)
464 PRK13613 lipoprotein LpqB; Pro 73.8 98 0.0021 35.8 15.7 124 192-320 410-542 (599)
465 KOG1007 WD repeat protein TSSC 73.2 1.1E+02 0.0025 31.2 16.0 111 289-412 128-249 (370)
466 smart00824 PKS_TE Thioesterase 72.7 13 0.00029 35.8 7.6 71 544-626 24-98 (212)
467 PLN02324 triacylglycerol lipas 72.4 5.5 0.00012 43.1 4.9 40 575-614 195-234 (415)
468 PLN02802 triacylglycerol lipas 71.3 5.8 0.00013 43.9 4.9 38 577-614 312-349 (509)
469 KOG4547 WD40 repeat-containing 71.1 41 0.00089 37.4 11.2 99 191-297 145-250 (541)
470 COG3204 Uncharacterized protei 70.8 1.3E+02 0.0029 31.0 16.2 111 238-362 88-211 (316)
471 KOG0321 WD40 repeat-containing 69.9 1.8E+02 0.0039 33.1 15.6 206 192-412 102-395 (720)
472 COG3490 Uncharacterized protei 69.5 1.4E+02 0.003 30.6 13.9 74 289-363 72-148 (366)
473 TIGR03300 assembly_YfgL outer 69.0 1.7E+02 0.0037 31.5 27.8 130 339-497 240-372 (377)
474 KOG1963 WD40 repeat protein [G 68.6 57 0.0012 38.1 12.0 110 193-318 208-323 (792)
475 KOG1523 Actin-related protein 68.5 48 0.0011 34.2 10.2 102 193-305 13-121 (361)
476 PRK13614 lipoprotein LpqB; Pro 68.4 1.3E+02 0.0028 34.6 14.9 124 192-320 384-521 (573)
477 PLN02753 triacylglycerol lipas 67.4 8.1 0.00018 43.0 5.0 42 573-614 287-331 (531)
478 KOG2041 WD40 repeat protein [G 67.2 2.5E+02 0.0053 32.6 19.5 56 192-252 117-174 (1189)
479 KOG0267 Microtubule severing p 67.1 22 0.00048 40.5 8.2 113 192-320 72-187 (825)
480 PLN00413 triacylglycerol lipas 67.0 9.1 0.0002 42.1 5.2 38 575-614 266-303 (479)
481 PF05096 Glu_cyclase_2: Glutam 66.8 1.5E+02 0.0034 30.1 19.4 151 195-366 49-206 (264)
482 KOG3914 WD repeat protein WDR4 66.5 1.6E+02 0.0035 31.4 13.9 113 291-413 114-227 (390)
483 COG4287 PqaA PhoPQ-activated p 65.7 83 0.0018 33.3 11.4 124 592-725 231-371 (507)
484 PLN02761 lipase class 3 family 65.6 9.4 0.0002 42.4 5.0 41 574-614 269-313 (527)
485 KOG2521 Uncharacterized conser 65.6 83 0.0018 33.5 11.9 67 680-750 228-294 (350)
486 KOG1963 WD40 repeat protein [G 65.5 40 0.00088 39.3 10.1 57 192-253 253-310 (792)
487 PF13449 Phytase-like: Esteras 65.5 1.9E+02 0.0041 30.7 24.1 122 240-364 89-252 (326)
488 PLN02310 triacylglycerol lipas 64.6 10 0.00022 41.1 5.0 40 575-614 187-228 (405)
489 KOG1230 Protein containing rep 64.3 70 0.0015 34.3 10.7 102 217-320 154-278 (521)
490 PF07995 GSDH: Glucose / Sorbo 64.0 1.4E+02 0.003 31.8 13.7 118 239-364 5-157 (331)
491 KOG1063 RNA polymerase II elon 63.2 2.9E+02 0.0062 31.9 16.2 192 197-401 152-386 (764)
492 KOG1036 Mitotic spindle checkp 63.1 1.9E+02 0.0041 29.9 20.5 149 192-364 15-164 (323)
493 PF03088 Str_synth: Strictosid 62.5 77 0.0017 26.4 8.8 70 195-269 2-87 (89)
494 PRK13615 lipoprotein LpqB; Pro 62.5 67 0.0015 36.7 11.2 79 192-271 418-504 (557)
495 KOG2100 Dipeptidyl aminopeptid 62.5 3.4E+02 0.0074 32.6 21.9 74 291-364 346-423 (755)
496 KOG2321 WD40 repeat protein [G 62.0 2.3E+02 0.005 31.9 14.4 159 192-370 177-351 (703)
497 TIGR03606 non_repeat_PQQ dehyd 61.1 2E+02 0.0043 32.0 14.3 108 193-306 32-166 (454)
498 PLN02162 triacylglycerol lipas 60.9 13 0.00029 40.8 5.1 38 575-614 260-297 (475)
499 KOG1034 Transcriptional repres 60.8 1.1E+02 0.0025 31.8 11.2 152 193-361 184-381 (385)
500 PLN02934 triacylglycerol lipas 60.6 13 0.00028 41.3 4.9 39 574-614 302-340 (515)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-128 Score=1025.95 Aligned_cols=673 Identities=51% Similarity=0.887 Sum_probs=641.5
Q ss_pred CCCCCCcccceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCchHhHHHHHHHHHccccCCCCCCcEE
Q 004368 50 PSPPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFR 129 (758)
Q Consensus 50 ~~~P~a~~~~~~~~~hG~~~~DpY~WLed~~~~~~ev~~~l~~en~y~~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~~ 129 (758)
+.||+|+|+|++++.||+++.|+|+||||++|.+|+|++||+|||+|++++|+++++||++|++||++|+++++.|+|.+
T Consensus 4 p~pP~a~k~~~~~~~hg~~~~D~Y~WlRd~~~~~p~vl~yL~aEN~Yt~~~~a~~~~L~~~if~Ei~~Rik~dd~Svp~~ 83 (682)
T COG1770 4 PLPPIAKKVPTTRTHHGDTRVDDYAWLRDDNWSNPEVLAYLEAENAYTEAVMAHLQPLQKKIFEEIKGRIKEDDLSVPYR 83 (682)
T ss_pred CCCCCccccceeeeecCceeecchHhhhCCcccChHHHHHHHHhhHHHHHhhhhhHHHHHHHHHHHhhhccCcCCCCccc
Confidence 35899999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred eCcEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCCeEEEeeEEECCCCCEEEEEE
Q 004368 130 QGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAE 209 (758)
Q Consensus 130 ~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~ 209 (758)
+|+|+||+|...|++|+++||+...++ .+|++|||+|+++++++|++++.+.+|||+++|||+.
T Consensus 84 ~~~~~Yy~r~~~g~~y~~~~R~~~~g~----------------~~eevlLD~n~~A~g~~f~~Lg~~~~s~D~~~la~s~ 147 (682)
T COG1770 84 KGPYEYYSRTEEGKEYPIYCRQPDEGG----------------EGEEVLLDVNKEAEGHDFFSLGAASISPDHNLLAYSV 147 (682)
T ss_pred cCCeeEEEEecCCCcceeEEeccCCCC----------------CceeEeecchhccCcccceeeeeeeeCCCCceEEEEE
Confidence 999999999999999999999765432 2589999999999999999999999999999999999
Q ss_pred eCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceee
Q 004368 210 DTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSL 288 (758)
Q Consensus 210 ~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~ 288 (758)
|..|+|+++|+++||++|+.+.+.+.++..+++|.+|+ ++||++.++..++.+||+|.+|+....+++||++.++.|++
T Consensus 148 D~~G~e~y~lr~kdL~tg~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~ 227 (682)
T COG1770 148 DVLGDEQYTLRFKDLATGEELPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFL 227 (682)
T ss_pred ecccccEEEEEEEecccccccchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEE
Confidence 99999999999999999999998888888889999999 99999999999999999999999888899999999999999
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~ 367 (758)
++..|.+.+||++..++..+++++++|.+.+. .++.+.++..+++|..+|.|+++|+.+|.++ .+++|++.++ .+..
T Consensus 228 ~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~~d~f~i~sN~~g-knf~l~~ap~-~~~~ 305 (682)
T COG1770 228 SVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHGGDRFYILSNADG-KNFKLVRAPV-SADK 305 (682)
T ss_pred EeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEEeeeecCcEEEEEecCCC-cceEEEEccC-CCCh
Confidence 99999999999999999999999999999877 6788999999999999999999999999994 8999999998 4455
Q ss_pred cee--eecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccC-CCCcccCCcEE
Q 004368 368 TTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID-PSESVFSSRIL 444 (758)
Q Consensus 368 ~~~--l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~-~~~~~~d~~~l 444 (758)
..| +++++++..++++..++++|++.++++|.+++++.+... |+ ...|.|+++.++.. ..+..++++.+
T Consensus 306 ~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~-~~-------~~~i~f~~~ay~~~l~~~~e~~s~~l 377 (682)
T COG1770 306 SNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKT-GE-------ERGIAFDDEAYSAGLSGNPEFDSDRL 377 (682)
T ss_pred hcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCC-Cc-------eeeEEecchhhhccccCCCCCCCccE
Confidence 566 999999999999999999999999999999999998864 33 25689999888764 67788999999
Q ss_pred EEEEecCCCCCEEEEEECCCCcEEEEEEeeecCCCCCCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecC
Q 004368 445 RFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYG 524 (758)
Q Consensus 445 ~~~~sS~~~P~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hG 524 (758)
+|.|+|+++|.++|.||+.++++++++.++++++|+++.|+++++|++..||++||++|+|+++. +.+++.||+|++||
T Consensus 378 R~~ysS~ttP~~~~~~dm~t~er~~LkqqeV~~g~dp~~Y~s~riwa~a~dgv~VPVSLvyrkd~-~~~g~~p~lLygYG 456 (682)
T COG1770 378 RYSYSSMTTPATLFDYDMATGERTLLKQQEVPGGFDPEDYVSRRIWATADDGVQVPVSLVYRKDT-KLDGSAPLLLYGYG 456 (682)
T ss_pred EEEeecccccceeEEeeccCCcEEEEEeccCCCCCChhHeEEEEEEEEcCCCcEeeEEEEEeccc-CCCCCCcEEEEEec
Confidence 99999999999999999999999999999998889999999999999999999999999999997 78899999999999
Q ss_pred CCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeCh
Q 004368 525 SYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSA 604 (758)
Q Consensus 525 g~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~ 604 (758)
+||.++.+.|+..+.+|++||++++++|+||||+.|+.|+++|+..+|+|+|+||++|+++|+++|++++++|+++|+|+
T Consensus 457 aYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSA 536 (682)
T COG1770 457 AYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSA 536 (682)
T ss_pred cccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEec
Q 004368 605 GGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTA 684 (758)
Q Consensus 605 GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~ 684 (758)
||+|+++++++.|++|+++|+.+||+|++++|+++++|++..+|.|||||.+++.|++|++||||+||++..||++|+++
T Consensus 537 GGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~y~yikSYSPYdNV~a~~YP~ilv~~ 616 (682)
T COG1770 537 GGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEYYDYIKSYSPYDNVEAQPYPAILVTT 616 (682)
T ss_pred hhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHHHHHHhhcCchhccccCCCCceEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004368 685 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 749 (758)
Q Consensus 685 G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 749 (758)
|.+|+||.+||+.|++++|++.+.+..+++|+++|++||++.+++.+.+++.|++++|+.+.++.
T Consensus 617 Gl~D~rV~YwEpAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~l~~~~~ 681 (682)
T COG1770 617 GLNDPRVQYWEPAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFLLKLAGT 681 (682)
T ss_pred cccCCccccchHHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHHhhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999988764
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=1.6e-109 Score=953.01 Aligned_cols=676 Identities=41% Similarity=0.695 Sum_probs=599.5
Q ss_pred CCCCcccceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCchHhHHHHHHHHHccccCCCCCCcEEeC
Q 004368 52 PPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQG 131 (758)
Q Consensus 52 ~P~a~~~~~~~~~hG~~~~DpY~WLed~~~~~~ev~~~l~~en~y~~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~~~g 131 (758)
||.|+|+|+++++||+++.|||+||||.+|++|||++||++||+||+++|++++++|++|++||++|++.++.++|.++|
T Consensus 2 pP~a~~~~~~~~~hg~~~~DpY~WLed~~r~~~~v~~~l~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g 81 (686)
T PRK10115 2 LPKAARIPHAMTLHGDTRIDNYYWLRDDTRSQPEVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKN 81 (686)
T ss_pred cCCCCCCCeeEEeCCCEeccCchHhhCCCCCCHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcccccCCCCEEEC
Confidence 78899999999999999999999999976679999999999999999999998899999999999999999999999999
Q ss_pred cEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeC
Q 004368 132 SYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDT 211 (758)
Q Consensus 132 ~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~ 211 (758)
+|+||.++..|++++++||+..... ..+.++||||+|+++++++++.++.+.|||||++|||+.|.
T Consensus 82 ~~~y~~~~~~g~~~~~~~r~~~~~~--------------~~~~~~~llD~n~~a~~~~~~~l~~~~~Spdg~~la~~~d~ 147 (686)
T PRK10115 82 GYRYRHIYEPGCEYAIYQRQSAFSE--------------EWDEWETLLDANKRAAHSEFYTLGGMAITPDNTIMALAEDF 147 (686)
T ss_pred CEEEEEEEcCCCccEEEEEecCCCC--------------CCCCCEEEEcchhhccCCCcEEEeEEEECCCCCEEEEEecC
Confidence 9999999999999999999864221 01358999999999888899999999999999999999999
Q ss_pred CCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCCC-CCCceEEEEEcCCCCCCcEEEeeecCCceeeE
Q 004368 212 KGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEI-LRPDKAWLHKLEADQSNDICLYHEKDDIYSLG 289 (758)
Q Consensus 212 ~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~~-~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~ 289 (758)
+|+|+++|+|+|+++|+.+.+.++++...++|++|| .|+|++.++. .++.+||+|++++++.++++++++.+..+++.
T Consensus 148 ~G~E~~~l~v~d~~tg~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~ 227 (686)
T PRK10115 148 LSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVS 227 (686)
T ss_pred CCcEEEEEEEEECCCCCCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEE
Confidence 999999999999999987766677765569999999 8999998654 58899999999999888999999887777766
Q ss_pred EEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcc
Q 004368 290 LQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (758)
Q Consensus 290 ~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~ 368 (758)
...+.|++++++.+.+..++++++++++... .++.+.++..+..+.+.+.++.||+.+|.+ +++++|+.+++.+++..
T Consensus 228 ~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~-~~~~~l~~~~~~~~~~~ 306 (686)
T PRK10115 228 LHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRH-GKNFGLYRTRVRDEQQW 306 (686)
T ss_pred EEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEEcCC-CCCceEEEecCCCcccC
Confidence 6677799999998888888899998854322 356667777777777778889999999987 78999999998754444
Q ss_pred eeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccc-cCCCCcccCCcEEEEE
Q 004368 369 TVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYS-IDPSESVFSSRILRFH 447 (758)
Q Consensus 369 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~-i~~~~~~~d~~~l~~~ 447 (758)
+.++++..+..++++.+++++|++..+++|.+++++++++ ++.+ ..+.++++.+. ..+.+.+++++.++++
T Consensus 307 ~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~--~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (686)
T PRK10115 307 EELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRK--TREV------IGIAFDDPAYVTWIAYNPEPETSRLRYG 378 (686)
T ss_pred eEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCC--CCce------EEecCCCCceEeeecccCCCCCceEEEE
Confidence 4588887777899999999999999999999999888765 3322 23344333222 1234445778899999
Q ss_pred EecCCCCCEEEEEECCCCcEEEEEEeeecCCCCCCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCc
Q 004368 448 YSSLRTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYE 527 (758)
Q Consensus 448 ~sS~~~P~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~ 527 (758)
++|+++|+++|.+|+.+++.++++.... +.+++..+++++++++|.||++||++++++++. ..+++.|+||++||||+
T Consensus 379 ~ss~~~P~~~y~~d~~~~~~~~l~~~~~-~~~~~~~~~~e~v~~~s~DG~~Ip~~l~~~~~~-~~~~~~P~ll~~hGg~~ 456 (686)
T PRK10115 379 YSSMTTPDTLFELDMDTGERRVLKQTEV-PGFDAANYRSEHLWITARDGVEVPVSLVYHRKH-FRKGHNPLLVYGYGSYG 456 (686)
T ss_pred EecCCCCCEEEEEECCCCcEEEEEecCC-CCcCccccEEEEEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEECCCC
Confidence 9999999999999999887666554332 357778889999999999999999999998876 45678899999999999
Q ss_pred cCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHH
Q 004368 528 ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGL 607 (758)
Q Consensus 528 ~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~ 607 (758)
.+..+.|+...+.|+++||+|+++|+|||||||++|+++|++.+|.++++|+++|++||+++|++|++||+|+|+|+||+
T Consensus 457 ~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~ 536 (686)
T PRK10115 457 ASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGM 536 (686)
T ss_pred CCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCC
Q 004368 608 LIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN 687 (758)
Q Consensus 608 l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~ 687 (758)
|++++++++|++|+|+|+.+|++|++++|+++++|++..++.|||+|++++.+++|+++||++|++++++|+|||+||.+
T Consensus 537 l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~ 616 (686)
T PRK10115 537 LMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLH 616 (686)
T ss_pred HHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHHcCchhccCccCCCceeEEecCC
Confidence 99999999999999999999999999999988899888888999999999999999999999999999999899999999
Q ss_pred CCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCCCCC
Q 004368 688 DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 752 (758)
Q Consensus 688 D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 752 (758)
|+|||++|++||+++|++++++.++++|++++++||++..++...+++.|++++||.+.++.+-.
T Consensus 617 D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~~~ 681 (686)
T PRK10115 617 DSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGTLP 681 (686)
T ss_pred CCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCcCC
Confidence 99999999999999999999999999999999999998899999999999999999999987643
No 3
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-108 Score=865.16 Aligned_cols=683 Identities=41% Similarity=0.667 Sum_probs=589.8
Q ss_pred CCCCCCCcc-cceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCchHhHHHHHHHHHccccCCCCCCc
Q 004368 49 LPSPPVAKK-VEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAP 127 (758)
Q Consensus 49 ~~~~P~a~~-~~~~~~~hG~~~~DpY~WLed~~~~~~ev~~~l~~en~y~~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p 127 (758)
+..||+++| +++.+++||++|.|||+||||++ +.++.+||++||.||+++|++++..+ +|..||+.|++++..++|
T Consensus 3 ~~~~P~~~k~e~~~~~~hg~~v~Dpy~Wl~d~d--~~~~~~fv~~en~~t~~vl~~~e~~~-kl~~em~~~i~ye~~~~p 79 (712)
T KOG2237|consen 3 PLQYPVARKDESVAEDFHGVTVEDPYRWLEDPD--DTEMKEFVEAENKYTDAVLEDTETKE-KLFSEMTKRIDYEIITPP 79 (712)
T ss_pred CCCCCCcccccchhhhcCCceecCcchhhcCCc--HHHHHHHHHHhhhhhHHHHhccHHHH-HHHHHhhhccCccccCCc
Confidence 344666665 66778999999999999999998 99999999999999999999996555 999999999999999999
Q ss_pred EEeCcEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCCeEEEeeEEECCCCCEEEE
Q 004368 128 FRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAY 207 (758)
Q Consensus 128 ~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy 207 (758)
.++|+|+||.++.++++|+++||+....+ +..+.|.. ...+..+|+||.|++++.++|+..+-...|||.++|||
T Consensus 80 ~r~G~~yyY~~n~~lkq~vl~~rr~~~~e--~~~~ld~~---~~~dd~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~ 154 (712)
T KOG2237|consen 80 LRWGPWYYYFYNTGLKQYVLYCRRLLEKE--EEVFLDPN---ALGDDGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAY 154 (712)
T ss_pred cccCCEEEEEEcCCceehhHHHHhhhhcc--cceecCCc---cCCCCceEEechhhhhhcCCceEEeecccCCCceEEEE
Confidence 99999999999999999999999876322 12222222 22345689999999999999999988889999999999
Q ss_pred EEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEec-CC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCc
Q 004368 208 AEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAG-NE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDI 285 (758)
Q Consensus 208 ~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wsp-Dg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~ 285 (758)
..+..|+|.+++ |.++...++.-.......+..+|.. || .|.|.+.++.+++++||+|.+|+.+.+|++++++.++.
T Consensus 155 ~~~~~~~e~~~~-v~~~~~~~~~~~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~ 233 (712)
T KOG2237|consen 155 TKDTEGKELFTV-VIDVKFSGPVWTHDGKGVSYLAWAKQDGEDLLYGTEDENNRPHKVYYHTLGTDQSEDVLLYEEKDEP 233 (712)
T ss_pred EEcCCCCcccee-eeeeccCCceeeccCCceEeeeecccCCceeeeeeeccccCcceEEEEecccCCCcceEEEecCCCC
Confidence 999999999999 9999988877543333455689987 88 78999999999999999999999999999999999988
Q ss_pred eeeEEEEcCCCcEEEEEecCCcc---eEEEEEeCCCCC-ceEE-eeccccceeeE------EeecCCEEEEEEcCCCCCC
Q 004368 286 YSLGLQASESKKFLFIASESKIT---RFVFYLDVSKPE-ELRV-LTPRVVGVDTA------ASHRGNHFFITRRSDELFN 354 (758)
Q Consensus 286 ~~~~~~~S~Dg~~l~~~s~~~~~---~~l~~~d~~~~~-~~~~-l~~~~~~~~~~------~s~dg~~l~~~s~~~~~~~ 354 (758)
.++..+-+.|+++..+.+.+.+. +.+|.+|+.... ++.. +.++..++.++ +..++..++|.+|.+ +++
T Consensus 234 ~~vf~~~~kD~~~~~i~si~~t~s~~~~vf~~d~~~~~~gl~~~~~~~v~~v~~f~eh~~fi~~~~t~~~~~tn~~-~p~ 312 (712)
T KOG2237|consen 234 KHVFISETKDSGFYTINSISETCSPVNKVFLCDLSSPSDGLELLILPRVKGVDCFVEHYDFITNEGTEFYFLTNKD-APN 312 (712)
T ss_pred eEEEEEEEecCceEEEEEeeccCCccceEEEEecccccCCcchheeeccchhhhhhhhhhheeccCcceeeeccCC-CCc
Confidence 88777778888887777766554 499999997655 4553 66776666544 445568899999998 899
Q ss_pred cEEEEEeCCCCCccee--eecCCCCceeeeEEEeCCEEEEEEEeCCeeE-EEEEEcCCCCCccccccCCceeeccCcccc
Q 004368 355 SELLACPVDNTSETTV--LIPHRESVKLQDIQLFIDHLAVYEREGGLQK-ITTYRLPAVGEPLKSLQGGKSVEFIDPVYS 431 (758)
Q Consensus 355 ~~L~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~-l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~ 431 (758)
+.+.++++..+....| ++.+.+...+++++..++.+++......... +.+..+- +|. ....||.+.++
T Consensus 313 y~l~r~~~~~~~~~~W~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~l-~g~--------~~~~fpLpv~s 383 (712)
T KOG2237|consen 313 YYLLRIDVKEPEESKWETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDLL-DGS--------LLRSFPLPVGS 383 (712)
T ss_pred eeEEeeeccCccccccceeecccchhhhhhhhhhcCceEEEEEecCchhhccccccc-cCc--------eeeeecCCCCc
Confidence 9999999987755666 7777777788888888776655544443332 2222222 122 44567778888
Q ss_pred cCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEE---EEEEeeecCCCCCCCceeEEEEeeCCCCeEEEEEEEeecc
Q 004368 432 IDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISV---LKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKN 508 (758)
Q Consensus 432 i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~ 508 (758)
+.+...++++++++|.++|+.+|+.||.||+..++.+ ..+...+.++|+.+.|++++++++|+||++||++|+|.++
T Consensus 384 v~~~~g~~~~~~~~f~~sS~l~P~~iy~yDl~~~~~e~~vf~e~~~~lpg~~~s~y~~~r~~~~SkDGt~VPM~Iv~kk~ 463 (712)
T KOG2237|consen 384 VSGTSGDFKSSTIRFQFSSFLTPGSIYDYDLANGKPEPSVFREITVVLPGFDASDYVVERIEVSSKDGTKVPMFIVYKKD 463 (712)
T ss_pred ccccccCCCCceEEEEEeccCCCCeEEEeeccCCCCCCcceeeeccccCcccccceEEEEEEEecCCCCccceEEEEech
Confidence 8777779999999999999999999999999998432 2223344578999999999999999999999999999888
Q ss_pred ccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHH
Q 004368 509 LVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (758)
Q Consensus 509 ~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (758)
. +.+++.|++|++||||+.+..+.|......|+++|++.+++|+|||||+|.+||+.|+..+|+|+|+||++|++||++
T Consensus 464 ~-k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve 542 (712)
T KOG2237|consen 464 I-KLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVE 542 (712)
T ss_pred h-hhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHH
Confidence 7 888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCc
Q 004368 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSP 668 (758)
Q Consensus 589 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp 668 (758)
+|++.|+++++.|+|+||+|++++++++||+|+|+|+.+||+||++++.++.+|++..+|.|||+|++.+.+-+++.|||
T Consensus 543 ~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ee~g~p~~~~~~~~i~~y~p 622 (712)
T KOG2237|consen 543 NGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDYEEWGNPEDFEDLIKISPYSP 622 (712)
T ss_pred cCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhhcccCChhhhhhhheecccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred ccccCCCC-CCeEEEeccCCCCCCCChHHHHHHHHHHhcCCC----CceEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 004368 669 VDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD----DNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 743 (758)
Q Consensus 669 ~~~i~~~~-~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 743 (758)
++|+++.. ||.|||+++.||+||+++|+.||+++||++... .++++++++.++||+...++...+++.++.++||
T Consensus 623 v~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl 702 (712)
T KOG2237|consen 623 VDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFL 702 (712)
T ss_pred cCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCccccCCchHHHHHHHHHHHHHH
Confidence 99999885 999999999999999999999999999997533 3679999999999999999999999999999999
Q ss_pred HHhcCCCC
Q 004368 744 MRALSMLP 751 (758)
Q Consensus 744 ~~~l~~~~ 751 (758)
.+.++..+
T Consensus 703 ~K~~~~~~ 710 (712)
T KOG2237|consen 703 AKMLNSDW 710 (712)
T ss_pred HHHhcCcc
Confidence 99998765
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-81 Score=655.40 Aligned_cols=629 Identities=29% Similarity=0.396 Sum_probs=492.3
Q ss_pred eecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCchHhHHHHHHHHHccccCCCCCCcEEeCcEEEEEEecCCCeeEEE
Q 004368 69 RVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQH 148 (758)
Q Consensus 69 ~~DpY~WLed~~~~~~ev~~~l~~en~y~~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~ 148 (758)
..|||+||||.+ ++|+++|+++||+-|..+|... +-++.+.+++.+.+..++..+|...|+++|.-.+.......++
T Consensus 2 ~~DPy~wlEd~~--~~eal~wv~~~N~~t~~~L~~~-~~~a~~~~~~~~l~d~~~~~~~~~~~~~~ynFw~D~~~p~Glw 78 (648)
T COG1505 2 VPDPYRWLEDLD--SAEALKWVEAQNAKTREFLGED-SARAASDKRLLELWDYEDIPIPFERGGRYYNFWQDALYPRGLY 78 (648)
T ss_pred CCCcchhhhcCC--cHHHHHHHHhhhhHHHHHhhcc-hhhHHHHHHHHHHhhccccCcceeccceeEEeeccccCcceeE
Confidence 469999999977 9999999999999999999999 6688899999999998889999999998887666554444444
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCC-eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCC
Q 004368 149 CRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRG-FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG 227 (758)
Q Consensus 149 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~-~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g 227 (758)
.|....+ .+ ...+..+||+|.+++++..| .+...+.+.+||+++++|+.+.+|++...++++|+++|
T Consensus 79 r~ttl~s----------yr--s~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~s~S~gG~D~~~~re~Dlet~ 146 (648)
T COG1505 79 RRTTLET----------YR--SAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETG 146 (648)
T ss_pred Eeeccee----------ec--ccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEEEecCCCCcceEEEEEEeccc
Confidence 3332211 11 12346799999999986543 66778888899999999999999999999999999999
Q ss_pred ceeeccccCcceeEEEecCCeEEEEEeCC------CCCC---ceEEEEEcCCCCCCcEEEeeecC-CceeeEEEEcCCCc
Q 004368 228 TPVGKPLVGVTASVEWAGNEALVYITMDE------ILRP---DKAWLHKLEADQSNDICLYHEKD-DIYSLGLQASESKK 297 (758)
Q Consensus 228 ~~~~~~~~~~~~~~~wspDg~l~y~~~~~------~~~~---~~v~~~~l~~~~~~~~~v~~~~~-~~~~~~~~~S~Dg~ 297 (758)
+.+... .-...++.|.+++.++|.+... ...+ ..++++++..++..++.++...+ ......+..+.|++
T Consensus 147 ~fv~~~-~f~~~~~~wld~d~~~~~~~~~~~e~T~sGy~~~~~~~krg~~f~~~~~dv~V~a~~~~~~~~~~~~~~~~~~ 225 (648)
T COG1505 147 EFVEEE-GFKFPGISWLDDDGVFVSRYWRPKEKTPSGYPRVVKRLKRGKLFEGQEGDVMVNARGDQDPWGFRLVLSEDGD 225 (648)
T ss_pred ccccCC-CccccceEEecCCCEEEecccCCcccCccCCchHhhhhhhcccccCCCCceEEecccccCCccceEEEeeccc
Confidence 877643 1123448999888676666533 1122 24567778888888888876543 11223445666666
Q ss_pred EEEEEecCC--cceEEEEEeCCCC--CceEEe-e-ccccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceee
Q 004368 298 FLFIASESK--ITRFVFYLDVSKP--EELRVL-T-PRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVL 371 (758)
Q Consensus 298 ~l~~~s~~~--~~~~l~~~d~~~~--~~~~~l-~-~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l 371 (758)
+++....-. ....++ +++-+. .....| . .+.+. . ....+.+.+++.+... ... +....+
T Consensus 226 ~f~~~~~~~~~~~~~~~-l~~p~~~~~~~~~l~~~~r~dw-~-~~~~~~g~l~l~~~e~-~~~-----------g~~~a~ 290 (648)
T COG1505 226 FFMLSLWLGTSGKGLIK-LGLPDKVGYEWGKLVNTLRADW-T-FADVDYGLLYLLTDED-LEL-----------GKVIAE 290 (648)
T ss_pred hhhheeeEeccCCCcee-ccCCccccceeeeeeEeecccc-c-ccCcccceEEEEehhc-ccc-----------CceeEE
Confidence 654332211 111222 222111 001111 0 00000 0 0111222333333322 111 111124
Q ss_pred ecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecC
Q 004368 372 IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL 451 (758)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~ 451 (758)
+.+.+...++.+....+++++...+|...++.++.+. |.. .+++.+|.+. .+...+.+.+++.+.+.++|+
T Consensus 291 ~~P~~~~~le~v~tt~~~~va~~l~nv~~~l~v~~~~--g~~------~~~v~l~~~g-a~~~~~~~~~g~ev~l~~t~F 361 (648)
T COG1505 291 FIPEEEQSLEQVVTTKDKLVAGTLDNVSGRLEVYDLK--GER------IEEVELPPPG-ALGMGSADKDGDEVFLAFTSF 361 (648)
T ss_pred ecCCcccceeeeEEEcCeEEeeeehhccceEEEeccC--ceE------eeecccCCcc-ceeeccCCCCCcEEEEEeecc
Confidence 4455566899999999999999999998899998876 443 2567777654 444346678899999999999
Q ss_pred CCCCEEEEEECCCCcEEEEEEeeecCCCCCCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCC
Q 004368 452 RTPPSVYDYDMDMGISVLKKIETVLGGFDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND 531 (758)
Q Consensus 452 ~~P~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~ 531 (758)
++|+++|+++..+++.++++..+ ..|+++++++++.+.+|.||++||.+|++ |+. +.+ ++|++|+.|||++.+..
T Consensus 362 ~tP~~~~r~~~~~~eLe~ik~~p--~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-~~d-~~pTll~aYGGF~vslt 436 (648)
T COG1505 362 TTPSTLYRLDLFGGELEVIREQP--VQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-KKD-ENPTLLYAYGGFNISLT 436 (648)
T ss_pred cCCCceEEEecCCceehhhhhcc--CCcCccCceEEEEEEEcCCCccccEEEEe-cCC-cCC-CCceEEEeccccccccC
Confidence 99999999999999866655443 48999999999999999999999999999 886 666 89999999999999999
Q ss_pred CCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH
Q 004368 532 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 611 (758)
Q Consensus 532 ~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 611 (758)
|.|+..+..|+++|.+++++|+|||||||.+||+++++.++++.|+|+.|+++.|+++|++.|++|||.|+|+||+|+++
T Consensus 437 P~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~ 516 (648)
T COG1505 437 PRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGA 516 (648)
T ss_pred CccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCC-CCCCeEEEeccCCCCC
Q 004368 612 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA-QNYPHILVTAGLNDPR 690 (758)
Q Consensus 612 ~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~-~~~P~~Li~~G~~D~~ 690 (758)
+++|+|++|.|+||.+|++||+++. .++....+..|||+|.+|+.+..|.+||||+|++. .+|||+||++|.+|+|
T Consensus 517 alTQrPelfgA~v~evPllDMlRYh---~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDR 593 (648)
T COG1505 517 ALTQRPELFGAAVCEVPLLDMLRYH---LLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDR 593 (648)
T ss_pred eeccChhhhCceeeccchhhhhhhc---ccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEccccccc
Confidence 9999999999999999999999986 33444444589999999999999999999999998 4999999999999999
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcC
Q 004368 691 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 691 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 748 (758)
|.|+|++||+++|++.+.+ ++|.++-++||++..+..+..++.++.++||.+.|+
T Consensus 594 VHPaHarKfaa~L~e~~~p---v~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 594 VHPAHARKFAAKLQEVGAP---VLLREETKGGHGGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred ccchHHHHHHHHHHhcCCc---eEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999944 567777899999999998889999999999999875
No 5
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=1.6e-57 Score=502.92 Aligned_cols=396 Identities=37% Similarity=0.625 Sum_probs=327.2
Q ss_pred CCCCcccceEEeecCCeeecCCcccccCCCCCHHHHHHHHHHHHHHHHHhcCchHhHHHHHHHHHccccCCCCCCcEEeC
Q 004368 52 PPVAKKVEHKMELFGDVRVDNYYWLRDDSRSDPEVLAYLKQENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQG 131 (758)
Q Consensus 52 ~P~a~~~~~~~~~hG~~~~DpY~WLed~~~~~~ev~~~l~~en~y~~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~~~g 131 (758)
||++++.++++++||+++.|||+||||.+ ||+|++||++||+||+++|+++++++++|++||++++..+..++|.+.|
T Consensus 1 P~~~~~~~~~~~~hg~~~~DpY~WLed~~--~~~v~~~~~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g 78 (414)
T PF02897_consen 1 PPTARKPPVVETLHGVTITDPYRWLEDDD--SPEVLAWLKAENAYTEAYLAQLKPLREKLYEELKARINEDRESVPVRRG 78 (414)
T ss_dssp S-TTS-TTSEEEETTEEEE-TTGGGGSTT--SHHHHHHHHHHHHHHHHHHHTSHTCHHHHHHHHHHHCSSSEE---EEET
T ss_pred CCCCCCCCeeeecCCCEeecCchhhcCCC--CHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHhhccCCCccccEEEC
Confidence 57777777999999999999999999987 9999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeC
Q 004368 132 SYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDT 211 (758)
Q Consensus 132 ~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~ 211 (758)
+|+||.+..++++++++||+..... +...++||||+|+++++.+++.++.+.+||||++|||+.+.
T Consensus 79 ~~~y~~~~~~~~~~~~~~r~~~~~~--------------~~~~~evllD~n~l~~~~~~~~~~~~~~Spdg~~la~~~s~ 144 (414)
T PF02897_consen 79 GYYYYSRNQGGKNYPVLYRRKTDEE--------------DGPEEEVLLDPNELAKDGGYVSLGGFSVSPDGKRLAYSLSD 144 (414)
T ss_dssp TEEEEEEE-SS-SS-EEEEEETTS---------------TS-C-EEEEEGGGGSTTSS-EEEEEEEETTTSSEEEEEEEE
T ss_pred CeEEEEEEcCCCceEEEEEEecccC--------------CCCceEEEEcchHhhccCceEEeeeeeECCCCCEEEEEecC
Confidence 9999999999999999999876410 01235999999999987668888899999999999999999
Q ss_pred CCCeEEEEEEEECCCCceeeccccCcce-eEEEecCC-eEEEEEeCCCCC------CceEEEEEcCCCCCCcEEEeeecC
Q 004368 212 KGDEIYTVYVIDIETGTPVGKPLVGVTA-SVEWAGNE-ALVYITMDEILR------PDKAWLHKLEADQSNDICLYHEKD 283 (758)
Q Consensus 212 ~G~e~~~l~v~dl~~g~~~~~~~~~~~~-~~~wspDg-~l~y~~~~~~~~------~~~v~~~~l~~~~~~~~~v~~~~~ 283 (758)
+|+|.++|+|+|+++|+.+.+.+.++.. +++|++|| .|||++.+...+ +++||+|++|++..++++||++.+
T Consensus 145 ~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~ 224 (414)
T PF02897_consen 145 GGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPD 224 (414)
T ss_dssp TTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TT
T ss_pred CCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecC
Confidence 9999999999999999988877666643 39999999 899999988767 999999999999988899999988
Q ss_pred Cce-eeEEEEcCCCcEEEEEecCCcc-eEEEEEeCCCC---C-ceEEeeccccceeeEEeecCCEEEEEEcCCCCCCcEE
Q 004368 284 DIY-SLGLQASESKKFLFIASESKIT-RFVFYLDVSKP---E-ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSEL 357 (758)
Q Consensus 284 ~~~-~~~~~~S~Dg~~l~~~s~~~~~-~~l~~~d~~~~---~-~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L 357 (758)
..+ ++++.+|+||++|++.+.+..+ +++|++|+.++ . .++++.++..+..+.+.+.|+.||+.+|.+ +++++|
T Consensus 225 ~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~-a~~~~l 303 (414)
T PF02897_consen 225 EPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDD-APNGRL 303 (414)
T ss_dssp CTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT--TT-EE
T ss_pred CCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCC-CCCcEE
Confidence 887 8889999999999999988777 99999999875 2 588898888888888888899999999987 899999
Q ss_pred EEEeCCCCCcce---eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCC
Q 004368 358 LACPVDNTSETT---VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDP 434 (758)
Q Consensus 358 ~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~ 434 (758)
++++++.+.... .++++.++..+.+++.++++|++..++++.++|.++++.. +.. ...+.+|.. +++.+
T Consensus 304 ~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~-~~~------~~~~~~p~~-g~v~~ 375 (414)
T PF02897_consen 304 VAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDD-GKE------SREIPLPEA-GSVSG 375 (414)
T ss_dssp EEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT--TEE------EEEEESSSS-SEEEE
T ss_pred EEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCC-CcE------EeeecCCcc-eEEec
Confidence 999998865422 3777777788999999999999999999999999999872 221 134555543 34556
Q ss_pred CCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEEEEE
Q 004368 435 SESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKI 472 (758)
Q Consensus 435 ~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~~~~ 472 (758)
.+.+++++.++|.++|+++|+++|.||+.+++.++++.
T Consensus 376 ~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~k~ 413 (414)
T PF02897_consen 376 VSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLLKQ 413 (414)
T ss_dssp EES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEEEe
Confidence 77788999999999999999999999999999777653
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-44 Score=410.62 Aligned_cols=525 Identities=19% Similarity=0.215 Sum_probs=351.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCC----CCC----CceE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDE----ILR----PDKA 263 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~----~~~----~~~v 263 (758)
+..+.|||||+.+++.... +....++|+.+.+ | ... ..........|+|+| .+.+..... ... ..++
T Consensus 62 ~~~~~~spdg~~~~~~~~~-~~~~~~l~l~~~~-g-~~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (620)
T COG1506 62 VSELRWSPDGSVLAFVSTD-GGRVAQLYLVDVG-G-LIT-KTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRL 137 (620)
T ss_pred ccccccCCCCCEEEEEecc-CCCcceEEEEecC-C-cee-eeecccccceeCCCCCeEEEEecccccccCCceeeeeccc
Confidence 4567899999999999943 3347899999998 5 222 122224558999999 777732211 010 0011
Q ss_pred EEEEcCCC-CCCcEEEeeec--------CCceeeEEEEcCCCcEEEEEecCCc----ceEEEEEeCCCCCceEEeecccc
Q 004368 264 WLHKLEAD-QSNDICLYHEK--------DDIYSLGLQASESKKFLFIASESKI----TRFVFYLDVSKPEELRVLTPRVV 330 (758)
Q Consensus 264 ~~~~l~~~-~~~~~~v~~~~--------~~~~~~~~~~S~Dg~~l~~~s~~~~----~~~l~~~d~~~~~~~~~l~~~~~ 330 (758)
.....+.+ ......+.+.. .........+..+++.++....... ....++....++. +..+++...
T Consensus 138 ~~~~~~~g~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 216 (620)
T COG1506 138 PVWFDGRGGERSDLYVVDIESKLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGE-LESLTPGEG 216 (620)
T ss_pred ceeecCCCCcccceEEEccCcccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCc-eEEEcCCCc
Confidence 11111211 11111111111 1111224445556666655443322 1233333333443 555655544
Q ss_pred cee-eEEeecCCEEEEEEcCCC---CCCcEEEEEeCCCCCcceeeecCCC----CceeeeEEEeCCEEEEEEEe-CCeeE
Q 004368 331 GVD-TAASHRGNHFFITRRSDE---LFNSELLACPVDNTSETTVLIPHRE----SVKLQDIQLFIDHLAVYERE-GGLQK 401 (758)
Q Consensus 331 ~~~-~~~s~dg~~l~~~s~~~~---~~~~~L~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~l~~~~~~-~g~~~ 401 (758)
... ..+.++|+.+++..+... .....++..+.+...... ...... ...+. ....++.++++... .|...
T Consensus 217 ~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 294 (620)
T COG1506 217 SISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGELGEVDG-DLSSGDDTRGAWAVE-GGLDGDGLLFIATDGGGSSP 294 (620)
T ss_pred eeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccccccce-eeccCCcccCcHHhc-cccCCCcEEEEEecCCCceE
Confidence 433 348899998888877652 223445554411111111 111110 00111 11445666666665 44333
Q ss_pred EEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEEEEEeeecCCC-C
Q 004368 402 ITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLGGF-D 480 (758)
Q Consensus 402 l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~~~~~~~~~~~-~ 480 (758)
++.....+. ...+ +..+.+.+..+ +.+++.+++.++++..|+++|.++. ..+..++.... ... .
T Consensus 295 --l~~~~~~~~-------~~~~-~~~~~~~v~~f--~~~~~~~~~~~s~~~~p~~i~~~~~-~~~~~~~~~~~--~~~~~ 359 (620)
T COG1506 295 --LFRVDDLGG-------GVEG-LSGDDGGVPGF--DVDGRKLALAYSSPTEPPEIYLYDR-GEEAKLTSSNN--SGLKK 359 (620)
T ss_pred --EEEEeccCC-------ceee-ecCCCceEEEE--eeCCCEEEEEecCCCCccceEEEcC-CCceEEeeccc--ccccc
Confidence 333332111 0111 11111223323 3488999999999999999999987 33322222111 111 1
Q ss_pred CCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCc
Q 004368 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 560 (758)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 560 (758)
......+.+++++.||.+|+++++.|++. .+.+++|+||++||||.......|....+.|+++||+|+.+|+||+++||
T Consensus 360 ~~~~~~e~~~~~~~dG~~i~~~l~~P~~~-~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG 438 (620)
T COG1506 360 VKLAEPEPVTYKSNDGETIHGWLYKPPGF-DPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYG 438 (620)
T ss_pred cccCCceEEEEEcCCCCEEEEEEecCCCC-CCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccH
Confidence 23446899999999999999999999998 77777999999999998888888999999999999999999999999999
Q ss_pred hhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCC
Q 004368 561 RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT 640 (758)
Q Consensus 561 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~ 640 (758)
++|.++....++...++|+++++++|++++++|++||+|+|+||||||+++++++.| +|+|+++..+.+|++.++...+
T Consensus 439 ~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~ 517 (620)
T COG1506 439 REFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST 517 (620)
T ss_pred HHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc
Confidence 999999999999999999999999999999999999999999999999999999987 8999999999888888766555
Q ss_pred CCCChhhhhccCCCC-CHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecC
Q 004368 641 IPLTTAEWEEWGDPW-KEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCEL 719 (758)
Q Consensus 641 ~~~~~~~~~e~g~p~-~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 719 (758)
..+........+.+. +. +.+...||+.++.++++| +|++||++|.|||..|+++|+++|+..|+++++++|+
T Consensus 518 ~~~~~~~~~~~~~~~~~~---~~~~~~sp~~~~~~i~~P-~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p--- 590 (620)
T COG1506 518 EGLRFDPEENGGGPPEDR---EKYEDRSPIFYADNIKTP-LLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP--- 590 (620)
T ss_pred hhhcCCHHHhCCCcccCh---HHHHhcChhhhhcccCCC-EEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC---
Confidence 543322212223332 33 345789999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004368 720 GAGHFSKSGRFERLREAAFTYTFLMRALSM 749 (758)
Q Consensus 720 ~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 749 (758)
+++|..... ....+.....++||.++++.
T Consensus 591 ~e~H~~~~~-~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRP-ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCc-hhHHHHHHHHHHHHHHHhcC
Confidence 999987652 33444555578999999874
No 7
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-31 Score=279.38 Aligned_cols=330 Identities=20% Similarity=0.246 Sum_probs=244.2
Q ss_pred EEEEEEeCC--eeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcE
Q 004368 390 LAVYEREGG--LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (758)
Q Consensus 390 l~~~~~~~g--~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~ 467 (758)
++|....++ ...+++..+...|+ + ..+.+++++- +...+.+-+.++..++|-..|+.+..|.+..++-
T Consensus 518 VYf~gt~d~PlE~hLyvvsye~~g~-~--------~rlt~~g~sh-~~~l~~~~d~fv~~~~sv~sP~cv~~y~ls~~~~ 587 (867)
T KOG2281|consen 518 VYFVGTKDTPLEHHLYVVSYENPGE-I--------ARLTEPGYSH-SCELDQQCDHFVSYYSSVGSPPCVSLYSLSWPEN 587 (867)
T ss_pred EEEEccCCCCceeeEEEEEEecCCc-e--------eeccCCCccc-chhhhhhhhhHhhhhhcCCCCceEEEEeccCCcc
Confidence 444555555 33566666653343 2 2223333332 1122333334666778999999999998877653
Q ss_pred EEEEEe-e---e--cCCCCCCCcee-EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCC-CCCCCh---
Q 004368 468 VLKKIE-T---V--LGGFDTNNYFT-ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN-DPAFNS--- 536 (758)
Q Consensus 468 ~~~~~~-~---~--~~~~~~~~~~~-~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~-~~~~~~--- 536 (758)
..+..+ . + .....+.+|.. +-+.+.+..|..+.+.++.|.++ ++++++|+++++|||++.+. ...|..
T Consensus 588 ~~l~~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~-~pgkkYptvl~VYGGP~VQlVnnsfkgi~y 666 (867)
T KOG2281|consen 588 DPLPKQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNF-QPGKKYPTVLNVYGGPGVQLVNNSFKGIQY 666 (867)
T ss_pred CcccchhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccC-CCCCCCceEEEEcCCCceEEeeccccceeh
Confidence 222211 0 0 11223446654 66777888899999999999888 89999999999999999763 233443
Q ss_pred -HHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcC-CCCCCcEEEEEeChhHHHHHHHHh
Q 004368 537 -SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 537 -~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
....|+++||+|+.+|.||+--.|.+|-...++..++.+++|.+.++++|+++. ++|.+||+|.|+||||||++..++
T Consensus 667 lR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~ 746 (867)
T KOG2281|consen 667 LRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLA 746 (867)
T ss_pred hhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhh
Confidence 236889999999999999999999999999999999999999999999999985 999999999999999999999999
Q ss_pred hCCCceeEEEEcCCccchhhccCCCCCCCChhhhhcc-CCCC-CHHHHHHHHhcCcccccCCC-CCC-eEEEeccCCCCC
Q 004368 615 MRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW-GDPW-KEEFYFYMKSYSPVDNVKAQ-NYP-HILVTAGLNDPR 690 (758)
Q Consensus 615 ~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~-g~p~-~~~~~~~l~~~sp~~~i~~~-~~P-~~Li~~G~~D~~ 690 (758)
++|+.|++||+.+|++||.-+.. .++ +.| |-|+ +++.| .+-|-..++.+. +-| .+|++||.-|.+
T Consensus 747 ~~P~IfrvAIAGapVT~W~~YDT----gYT----ERYMg~P~~nE~gY---~agSV~~~VeklpdepnRLlLvHGliDEN 815 (867)
T KOG2281|consen 747 QYPNIFRVAIAGAPVTDWRLYDT----GYT----ERYMGYPDNNEHGY---GAGSVAGHVEKLPDEPNRLLLVHGLIDEN 815 (867)
T ss_pred cCcceeeEEeccCcceeeeeecc----cch----hhhcCCCccchhcc---cchhHHHHHhhCCCCCceEEEEecccccc
Confidence 99999999999999999976531 122 233 7773 44444 344667777776 344 399999999999
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 004368 691 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 691 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 745 (758)
|.+.|...++.+|.++|++.++++|| ++-|+.........-+ +..+.|+.+
T Consensus 816 VHF~Hts~Lvs~lvkagKpyeL~IfP---~ERHsiR~~es~~~yE-~rll~FlQ~ 866 (867)
T KOG2281|consen 816 VHFAHTSRLVSALVKAGKPYELQIFP---NERHSIRNPESGIYYE-ARLLHFLQE 866 (867)
T ss_pred hhhhhHHHHHHHHHhCCCceEEEEcc---ccccccCCCccchhHH-HHHHHHHhh
Confidence 99999999999999999999999998 8999875443332222 446778765
No 8
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=100.00 E-value=1.6e-32 Score=274.78 Aligned_cols=211 Identities=33% Similarity=0.480 Sum_probs=172.6
Q ss_pred CCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH
Q 004368 532 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 611 (758)
Q Consensus 532 ~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 611 (758)
|+|+...+.|+++||+|+.+|+||++++|.+|+..+....+...++|+++++++|++++.+|++||+|+|+|+||++++.
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 46888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCC-CCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCC
Q 004368 612 VLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPR 690 (758)
Q Consensus 612 ~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p-~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~ 690 (758)
+++++|++|+|+|+.+|++|+..+...... +...++.++|.+ ..++.|+.+..++++.++. .+.| +||+||++|.+
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~-~~~P-~li~hG~~D~~ 157 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLFSYYGTTDI-YTKAEYLEYGDPWDNPEFYRELSPISPADNVQ-IKPP-VLIIHGENDPR 157 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTTCSBHHTCC-HHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCG-GGSE-EEEEEETTBSS
T ss_pred hhcccceeeeeeeccceecchhcccccccc-cccccccccCccchhhhhhhhhcccccccccc-CCCC-EEEEccCCCCc
Confidence 999999999999999999998876544333 222245677887 5666665555555554433 4455 99999999999
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004368 691 VMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 749 (758)
Q Consensus 691 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 749 (758)
||+.++.+|+++|+++|+++++++++ ++||+........ +....+++||.++|+.
T Consensus 158 Vp~~~s~~~~~~L~~~g~~~~~~~~p---~~gH~~~~~~~~~-~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 158 VPPSQSLRLYNALRKAGKPVELLIFP---GEGHGFGNPENRR-DWYERILDFFDKYLKK 212 (213)
T ss_dssp STTHHHHHHHHHHHHTTSSEEEEEET---T-SSSTTSHHHHH-HHHHHHHHHHHHHTT-
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEEcC---cCCCCCCCchhHH-HHHHHHHHHHHHHcCC
Confidence 99999999999999999998888887 9999776544433 5667789999999975
No 9
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=5.3e-28 Score=278.93 Aligned_cols=389 Identities=18% Similarity=0.188 Sum_probs=253.8
Q ss_pred EeecC-CEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCc-eeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCc
Q 004368 336 ASHRG-NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV-KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 413 (758)
Q Consensus 336 ~s~dg-~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~ 413 (758)
++.|+ ..+++....+ .+-.++.......+.....++....+. .+....-+.+.+++.+...+...-.+|.++.....
T Consensus 347 ~~~d~~~~~~~~~~~~-~~~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~~~ 425 (755)
T KOG2100|consen 347 FSSDGSSYLKVDSVSD-GGYNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGSGT 425 (755)
T ss_pred EeecCCceeEEEeecc-CCEEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEccccc
Confidence 55555 3344444444 223445555544422222233222221 12222224457777776654444445555432322
Q ss_pred cccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEEEEEe--ee----cCCCCCCCceeE
Q 004368 414 LKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIE--TV----LGGFDTNNYFTE 487 (758)
Q Consensus 414 ~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~~~~~--~~----~~~~~~~~~~~~ 487 (758)
+..++-. ... ....+...+.+.....+++..+.+..|...+..-..........+. .. ...+.......+
T Consensus 426 ~~~lt~~-~~~---~~~~~~~~~~~~~~~~~v~~~~gP~~p~~~~~~~~~~~~~~~~~Le~n~~~~~~~~~~~~p~~~~~ 501 (755)
T KOG2100|consen 426 VESLTCS-LIT---GPCTYLSVSFSKSAKYYVLSCSGPKVPDGQLTRHSSKNSKTIVVLETNEELKKTIENVALPIVEFG 501 (755)
T ss_pred ccccccc-CCC---CcceEEEEecCCcccEEEEEccCCCCCcceeeccccccceEEEEeccChhhHHHhhcccCCcceeE
Confidence 2111111 010 1112223444555667777777888875422111111111111121 10 111111222233
Q ss_pred EEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCC-CCCC--hHHHHHHHcCcEEEEEecCCCCCCchhHH
Q 004368 488 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFN--SSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (758)
Q Consensus 488 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~~~~--~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 564 (758)
.+.+ ||....+.++.|+++ .+.+++|+++.+|||+++..- ..|. .....+..+|++|+.+|+||+|++|.++.
T Consensus 502 ~i~~---~~~~~~~~~~lP~~~-~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~ 577 (755)
T KOG2100|consen 502 KIEI---DGITANAILILPPNF-DPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFR 577 (755)
T ss_pred EEEe---ccEEEEEEEecCCCC-CCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHH
Confidence 4443 889999999999998 778899999999999984322 2222 23345667899999999999999999999
Q ss_pred hcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCC-CceeEEEEcCCccchhhccCCCCCCC
Q 004368 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP-DLFKAAVAAVPFVDVLTTMLDPTIPL 643 (758)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p-~~f~a~v~~~~~~d~~~~~~~~~~~~ 643 (758)
.+..+..+..+++|.+.+++++.+.+++|++||+|+|+|+|||+++.++.+.| +.|+|+++.+|++|+. +. +...
T Consensus 578 ~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~y-ds~~-- 653 (755)
T KOG2100|consen 578 SALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YY-DSTY-- 653 (755)
T ss_pred HHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-ee-cccc--
Confidence 99999999999999999999999999999999999999999999999999987 8999999999999988 32 2111
Q ss_pred Chhhhhcc-CCCC-CHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCC
Q 004368 644 TTAEWEEW-GDPW-KEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 721 (758)
Q Consensus 644 ~~~~~~e~-g~p~-~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 721 (758)
+ ++| |.|. +...| .+.++..++..++.|-+|++||+.|++|++.|+.+++++|+.+|++.++++|+ ++
T Consensus 654 t----erymg~p~~~~~~y---~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vyp---de 723 (755)
T KOG2100|consen 654 T----ERYMGLPSENDKGY---EESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYP---DE 723 (755)
T ss_pred c----HhhcCCCccccchh---hhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeC---CC
Confidence 1 345 6663 33334 45677777777777867999999999999999999999999999999999998 99
Q ss_pred CCCCCCCh--HHHHHHHHHHHHHHHHhcCCC
Q 004368 722 GHFSKSGR--FERLREAAFTYTFLMRALSML 750 (758)
Q Consensus 722 gH~~~~~~--~~~~~~~~~~~~fl~~~l~~~ 750 (758)
.|+..... ...+.+ +..||..+++..
T Consensus 724 ~H~is~~~~~~~~~~~---~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 724 NHGISYVEVISHLYEK---LDRFLRDCFGSP 751 (755)
T ss_pred CcccccccchHHHHHH---HHHHHHHHcCcc
Confidence 99886543 333333 578998777654
No 10
>PRK13604 luxD acyl transferase; Provisional
Probab=99.85 E-value=2.5e-20 Score=189.90 Aligned_cols=225 Identities=16% Similarity=0.140 Sum_probs=156.0
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCC-CCCchhHH
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGG-GELGRQWY 564 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~G~~~~ 564 (758)
+....+.+.||.+|.+|+..|++. ..++.|+||++|| ++... ..|...+..|+++||+|+.+|.||+ |+++.++.
T Consensus 9 ~~~~~~~~~dG~~L~Gwl~~P~~~--~~~~~~~vIi~HG-f~~~~-~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~ 84 (307)
T PRK13604 9 TIDHVICLENGQSIRVWETLPKEN--SPKKNNTILIASG-FARRM-DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID 84 (307)
T ss_pred chhheEEcCCCCEEEEEEEcCccc--CCCCCCEEEEeCC-CCCCh-HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 344557788999999999888753 2467899999999 44332 2366677899999999999999987 77776664
Q ss_pred hcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCC---C--
Q 004368 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD---P-- 639 (758)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~---~-- 639 (758)
+..... ...|+.++++||.+++ .++|+++|+|+||.++..+++.. ..+++|+.+|+.++..+... .
T Consensus 85 ~~t~s~----g~~Dl~aaid~lk~~~---~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~d~l~~~~~~~~ 155 (307)
T PRK13604 85 EFTMSI----GKNSLLTVVDWLNTRG---INNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLRDTLERALGYDY 155 (307)
T ss_pred cCcccc----cHHHHHHHHHHHHhcC---CCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHHHHHHHhhhccc
Confidence 332212 2589999999998863 47899999999999987666643 38999999999985533211 0
Q ss_pred -CCCCChh-hhhcc-CCCC-CHHHHHHHHh------cCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCC
Q 004368 640 -TIPLTTA-EWEEW-GDPW-KEEFYFYMKS------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 709 (758)
Q Consensus 640 -~~~~~~~-~~~e~-g~p~-~~~~~~~l~~------~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~ 709 (758)
.+|+... ....+ |..- ....++.... .+|+..+++.+.| +|++||.+|+.||+.++++++++++. .+
T Consensus 156 ~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~P-vLiIHG~~D~lVp~~~s~~l~e~~~s--~~ 232 (307)
T PRK13604 156 LSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIP-FIAFTANNDSWVKQSEVIDLLDSIRS--EQ 232 (307)
T ss_pred ccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCC-EEEEEcCCCCccCHHHHHHHHHHhcc--CC
Confidence 0111000 00001 1111 1122222222 3455777778888 99999999999999999999998754 34
Q ss_pred CceEEEEecCCCCCCCCCCh
Q 004368 710 DNILLFKCELGAGHFSKSGR 729 (758)
Q Consensus 710 ~~~~~~~~~~~~gH~~~~~~ 729 (758)
.+++.++ ++.|....+.
T Consensus 233 kkl~~i~---Ga~H~l~~~~ 249 (307)
T PRK13604 233 CKLYSLI---GSSHDLGENL 249 (307)
T ss_pred cEEEEeC---CCccccCcch
Confidence 5667776 9999876553
No 11
>PRK10566 esterase; Provisional
Probab=99.83 E-value=9e-20 Score=187.36 Aligned_cols=231 Identities=16% Similarity=0.158 Sum_probs=148.1
Q ss_pred EEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCC-chhHHhccc--ccCCcCh
Q 004368 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL-GRQWYENGK--FLKKKNT 575 (758)
Q Consensus 499 i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~-G~~~~~~~~--~~~~~~~ 575 (758)
++...++|++. .+++.|+||++||..+.. ..|......|+++||.|+++|+||+|.. +..-..... .......
T Consensus 12 ~~~~~~~p~~~--~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~ 87 (249)
T PRK10566 12 IEVLHAFPAGQ--RDTPLPTVFFYHGFTSSK--LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQN 87 (249)
T ss_pred cceEEEcCCCC--CCCCCCEEEEeCCCCccc--chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHH
Confidence 44455666542 235689999999964433 3466667888999999999999998742 110000000 0001134
Q ss_pred HhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEE-cCCccchhhccCCCCCCCChhhhhccCCC
Q 004368 576 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA-AVPFVDVLTTMLDPTIPLTTAEWEEWGDP 654 (758)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~-~~~~~d~~~~~~~~~~~~~~~~~~e~g~p 654 (758)
.+|+.++++++.+++.+|+++|+++|+|+||++++.++.++|+..++++. ..+..+.......+..... .+....
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 163 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLIPE----TAAQQA 163 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhccccccc----ccccHH
Confidence 67888899999999889999999999999999999999988876544432 3333221111000000000 000000
Q ss_pred CCHHHHHHHHhcCcccccCCC-CCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCC--CceEEEEecCCCCCCCCCChHH
Q 004368 655 WKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD--DNILLFKCELGAGHFSKSGRFE 731 (758)
Q Consensus 655 ~~~~~~~~l~~~sp~~~i~~~-~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~--~~~~~~~~~~~~gH~~~~~~~~ 731 (758)
...+.+..+..+++...+.++ ..| +|++||++|..||+.++++++++|+.++.+ .++++++ ++||... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~i~~~P-~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~---~~~H~~~---~~ 236 (249)
T PRK10566 164 EFNNIVAPLAEWEVTHQLEQLADRP-LLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEP---GVRHRIT---PE 236 (249)
T ss_pred HHHHHHHHHhhcChhhhhhhcCCCC-EEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecC---CCCCccC---HH
Confidence 011122334456666666665 577 999999999999999999999999998865 3444554 9999763 22
Q ss_pred HHHHHHHHHHHHHHhc
Q 004368 732 RLREAAFTYTFLMRAL 747 (758)
Q Consensus 732 ~~~~~~~~~~fl~~~l 747 (758)
....+.+||.++|
T Consensus 237 ---~~~~~~~fl~~~~ 249 (249)
T PRK10566 237 ---ALDAGVAFFRQHL 249 (249)
T ss_pred ---HHHHHHHHHHhhC
Confidence 3445689998875
No 12
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=9.8e-19 Score=187.51 Aligned_cols=264 Identities=14% Similarity=0.116 Sum_probs=165.4
Q ss_pred CCCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCC
Q 004368 480 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGEL 559 (758)
Q Consensus 480 ~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 559 (758)
.+.++..+...+++.||.+|++....|.+. ..+.|+||++||... .....|......|+++||.|+.+|+||+|..
T Consensus 26 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~---~~~~~~VvllHG~~~-~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S 101 (330)
T PLN02298 26 ALKGIKGSKSFFTSPRGLSLFTRSWLPSSS---SPPRALIFMVHGYGN-DISWTFQSTAIFLAQMGFACFALDLEGHGRS 101 (330)
T ss_pred hccCCccccceEEcCCCCEEEEEEEecCCC---CCCceEEEEEcCCCC-CcceehhHHHHHHHhCCCEEEEecCCCCCCC
Confidence 344455566678888999999876665432 135689999999632 2233455555678889999999999999976
Q ss_pred chhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCC
Q 004368 560 GRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP 639 (758)
Q Consensus 560 G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~ 639 (758)
... .+....-....+|+.+++++|......+..++.++|+|+||.+++.++.++|++++++|+.+|+.++...+...
T Consensus 102 ~~~---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 178 (330)
T PLN02298 102 EGL---RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP 178 (330)
T ss_pred CCc---cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc
Confidence 421 01001112346789999999877643445689999999999999999999999999999999876532211000
Q ss_pred ------------CCCCCh-hhhhc-cC-CCCCHHHHHHHHhcCc----------------------ccccCCCCCCeEEE
Q 004368 640 ------------TIPLTT-AEWEE-WG-DPWKEEFYFYMKSYSP----------------------VDNVKAQNYPHILV 682 (758)
Q Consensus 640 ------------~~~~~~-~~~~e-~g-~p~~~~~~~~l~~~sp----------------------~~~i~~~~~P~~Li 682 (758)
..+... ..... .. ....+. ...+...+| ..++.++.+| +||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vLi 256 (330)
T PLN02298 179 WPIPQILTFVARFLPTLAIVPTADLLEKSVKVPA-KKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIP-FIV 256 (330)
T ss_pred hHHHHHHHHHHHHCCCCccccCCCcccccccCHH-HHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCC-EEE
Confidence 000000 00000 00 000000 000011111 1334566788 999
Q ss_pred eccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHH-HH-HHHHHHHHHHHhcCCCCCCCCCCC
Q 004368 683 TAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER-LR-EAAFTYTFLMRALSMLPSVGSEQS 758 (758)
Q Consensus 683 ~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~-~~-~~~~~~~fl~~~l~~~~~~~~~~~ 758 (758)
+||.+|..||+.+++++++++...+ .++++++ ++||......... .+ -...+.+||.++++... -|||.|
T Consensus 257 i~G~~D~ivp~~~~~~l~~~i~~~~--~~l~~~~---~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~-~~~~~~ 328 (330)
T PLN02298 257 LHGSADVVTDPDVSRALYEEAKSED--KTIKIYD---GMMHSLLFGEPDENIEIVRRDILSWLNERCTGKA-TPSEDS 328 (330)
T ss_pred EecCCCCCCCHHHHHHHHHHhccCC--ceEEEcC---CcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCC-CCcccc
Confidence 9999999999999999998876433 4566665 8999864322221 11 23346899999986544 445543
No 13
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.81 E-value=4.5e-19 Score=170.48 Aligned_cols=231 Identities=22% Similarity=0.275 Sum_probs=169.5
Q ss_pred CCCCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCC
Q 004368 479 FDTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE 558 (758)
Q Consensus 479 ~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~ 558 (758)
+.....++-.+++++.+|.+|.+|++.|+.. .++.|+||..|| |+.... +......|+..||+|+.+|.||.|+
T Consensus 49 ~~~~~ve~ydvTf~g~~g~rI~gwlvlP~~~---~~~~P~vV~fhG-Y~g~~g--~~~~~l~wa~~Gyavf~MdvRGQg~ 122 (321)
T COG3458 49 FTLPRVEVYDVTFTGYGGARIKGWLVLPRHE---KGKLPAVVQFHG-YGGRGG--EWHDMLHWAVAGYAVFVMDVRGQGS 122 (321)
T ss_pred ccCCceEEEEEEEeccCCceEEEEEEeeccc---CCccceEEEEee-ccCCCC--CccccccccccceeEEEEecccCCC
Confidence 4445667788999999999999999999864 378999999998 443322 3335677888999999999999887
Q ss_pred Cch------------hHHhcccccCC-----cChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCcee
Q 004368 559 LGR------------QWYENGKFLKK-----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 621 (758)
Q Consensus 559 ~G~------------~~~~~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~ 621 (758)
+-. .|+..|....+ ...+.|...+++-|.....+|++||++.|+|.||.+++++++..| +.+
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik 201 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIK 201 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhh
Confidence 622 12222222212 367899999999999999999999999999999999999999865 889
Q ss_pred EEEEcCCccchhhccCCCCCCCChhhhhc------cCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChH
Q 004368 622 AAVAAVPFVDVLTTMLDPTIPLTTAEWEE------WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSE 695 (758)
Q Consensus 622 a~v~~~~~~d~~~~~~~~~~~~~~~~~~e------~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~ 695 (758)
++++.+|++.-.....+ + .+...|.| .-.|...+.++.|.-++-.+-+.+++.| +|+..|.-|++|||.-
T Consensus 202 ~~~~~~Pfl~df~r~i~--~-~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~n~A~RiK~p-vL~svgL~D~vcpPst 277 (321)
T COG3458 202 AVVADYPFLSDFPRAIE--L-ATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIVNLAARIKVP-VLMSVGLMDPVCPPST 277 (321)
T ss_pred cccccccccccchhhee--e-cccCcHHHHHHHHHhcCchHHHHHHHHhhhhhhhHHHhhccc-eEEeecccCCCCCChh
Confidence 99999998542221111 1 12222222 1233456677777766767777778998 9999999999999999
Q ss_pred HHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Q 004368 696 PAKFVAKLREMKTDDNILLFKCELGAGHFSK 726 (758)
Q Consensus 696 ~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 726 (758)
....+++|...+ +.-+|+ .-+|...
T Consensus 278 qFA~yN~l~~~K---~i~iy~---~~aHe~~ 302 (321)
T COG3458 278 QFAAYNALTTSK---TIEIYP---YFAHEGG 302 (321)
T ss_pred hHHHhhcccCCc---eEEEee---ccccccC
Confidence 999999886543 334555 4457643
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.80 E-value=2.3e-18 Score=188.17 Aligned_cols=240 Identities=17% Similarity=0.109 Sum_probs=157.2
Q ss_pred CceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchh
Q 004368 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (758)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 562 (758)
.+..+++.++..||..|+++++.|+. +++.|+||+. ||.+......|......|+++||+|+.+|+||.|+...
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~----~~~~P~Vli~-gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~- 238 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG----DGPFPTVLVC-GGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK- 238 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC----CCCccEEEEe-CCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC-
Confidence 34568999999899889999888863 2568988865 44554333345555678999999999999999887532
Q ss_pred HHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCC--CC
Q 004368 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD--PT 640 (758)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~--~~ 640 (758)
+. ..........+++++|.....+|++||+++|+|+||++++.++..+|++++++|+..|+++....... ..
T Consensus 239 ~~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~ 312 (414)
T PRK05077 239 WK------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQ 312 (414)
T ss_pred CC------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhh
Confidence 10 01111123357889999999999999999999999999999999889999999999988752211100 01
Q ss_pred CCCChhh-h-hccCCC-CC-HHHHHHHHhcCccc--c-cCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceE
Q 004368 641 IPLTTAE-W-EEWGDP-WK-EEFYFYMKSYSPVD--N-VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNIL 713 (758)
Q Consensus 641 ~~~~~~~-~-~e~g~p-~~-~~~~~~l~~~sp~~--~-i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 713 (758)
.|..... + ...|.+ .+ ......+..++... . .+++++| +|++||++|+.||+.+++.+++... +.+++
T Consensus 313 ~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~P-vLiI~G~~D~ivP~~~a~~l~~~~~----~~~l~ 387 (414)
T PRK05077 313 VPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTP-MLSGYWKNDPFSPEEDSRLIASSSA----DGKLL 387 (414)
T ss_pred chHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCc-EEEEecCCCCCCCHHHHHHHHHhCC----CCeEE
Confidence 1111000 1 123432 22 22333344444211 1 2456788 9999999999999999987765442 34567
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhc
Q 004368 714 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 747 (758)
Q Consensus 714 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 747 (758)
.++ +..|. ......+ ..+..||.++|
T Consensus 388 ~i~---~~~~~--e~~~~~~---~~i~~wL~~~l 413 (414)
T PRK05077 388 EIP---FKPVY--RNFDKAL---QEISDWLEDRL 413 (414)
T ss_pred Ecc---CCCcc--CCHHHHH---HHHHHHHHHHh
Confidence 776 44222 2233333 33678998876
No 15
>PLN02442 S-formylglutathione hydrolase
Probab=99.80 E-value=3.8e-18 Score=177.65 Aligned_cols=224 Identities=17% Similarity=0.174 Sum_probs=144.3
Q ss_pred eeEEEEeeCC-CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHH-HHHHHcCcEEEEEecCCCC-----
Q 004368 485 FTERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLDRGFIFAIAQIRGGG----- 557 (758)
Q Consensus 485 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~-~~l~~~G~~v~~~~~RG~g----- 557 (758)
..+++++.|. =|..+++.+++|+. ..+++.|+|+++||..+....+...... ..+...|++|+++|..++|
T Consensus 17 ~~~~~~~~s~~l~~~~~~~vy~P~~--~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 17 FNRRYKHFSSTLGCSMTFSVYFPPA--SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred EEEEEEEeccccCCceEEEEEcCCc--ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 3455555553 46789999999984 3456899999999976554333222222 3445679999999986544
Q ss_pred -------CCchhHHhccc-ccC---C--cChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEE
Q 004368 558 -------ELGRQWYENGK-FLK---K--KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 624 (758)
Q Consensus 558 -------~~G~~~~~~~~-~~~---~--~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v 624 (758)
++|..|+.... ..+ + ....+++...++... ..+|+++++|+|+|+||++++.++.++|++|++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEE
Confidence 11222221110 000 1 001223333333222 23688999999999999999999999999999999
Q ss_pred EcCCccchhhccCCCCCCCChhhh-hccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCCh-HHHHHHHH
Q 004368 625 AAVPFVDVLTTMLDPTIPLTTAEW-EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYS-EPAKFVAK 702 (758)
Q Consensus 625 ~~~~~~d~~~~~~~~~~~~~~~~~-~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~-~~~~~~~~ 702 (758)
+.+|+.|+... ++..... ..+|.+. +.++.....+|+.++...+.| +|++||++|+.|+.. ++..++++
T Consensus 173 ~~~~~~~~~~~------~~~~~~~~~~~g~~~--~~~~~~d~~~~~~~~~~~~~p-vli~~G~~D~~v~~~~~s~~~~~~ 243 (283)
T PLN02442 173 AFAPIANPINC------PWGQKAFTNYLGSDK--ADWEEYDATELVSKFNDVSAT-ILIDQGEADKFLKEQLLPENFEEA 243 (283)
T ss_pred EECCccCcccC------chhhHHHHHHcCCCh--hhHHHcChhhhhhhccccCCC-EEEEECCCCccccccccHHHHHHH
Confidence 99999885421 1111111 2235432 222222333445555555666 999999999999974 68999999
Q ss_pred HHhcCCCCceEEEEecCCCCCC
Q 004368 703 LREMKTDDNILLFKCELGAGHF 724 (758)
Q Consensus 703 L~~~~~~~~~~~~~~~~~~gH~ 724 (758)
+++.+.++++.+++ +.+|.
T Consensus 244 l~~~g~~~~~~~~p---g~~H~ 262 (283)
T PLN02442 244 CKEAGAPVTLRLQP---GYDHS 262 (283)
T ss_pred HHHcCCCeEEEEeC---CCCcc
Confidence 99999888777776 88995
No 16
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.79 E-value=7.2e-19 Score=183.99 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=162.8
Q ss_pred CCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCc
Q 004368 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG 560 (758)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G 560 (758)
...+.+..+.+.+.+|..|.++++.|++. .++.|+||..||..+.... ......|+.+||+|+.+|.||.|+..
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~---~~~~Pavv~~hGyg~~~~~---~~~~~~~a~~G~~vl~~d~rGqg~~~ 124 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNA---KGKLPAVVQFHGYGGRSGD---PFDLLPWAAAGYAVLAMDVRGQGGRS 124 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-S---SSSEEEEEEE--TT--GGG---HHHHHHHHHTT-EEEEE--TTTSSSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCC---CCCcCEEEEecCCCCCCCC---cccccccccCCeEEEEecCCCCCCCC
Confidence 34667788999999999999999999854 4789999999984333211 12345789999999999999998543
Q ss_pred hhHHh-----------cccccCC-----cChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEE
Q 004368 561 RQWYE-----------NGKFLKK-----KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV 624 (758)
Q Consensus 561 ~~~~~-----------~~~~~~~-----~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v 624 (758)
.+... .|..... ...+.|.+.++++|.+...+|++||+++|.|.||.+++++++..| ++++++
T Consensus 125 ~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~ 203 (320)
T PF05448_consen 125 PDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAA 203 (320)
T ss_dssp -B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEE
T ss_pred CCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEE
Confidence 32211 1111101 135689999999999999999999999999999999999999875 699999
Q ss_pred EcCCc-cchhhccC-CC-CCCCC-hhhhhccCCC---CCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHH
Q 004368 625 AAVPF-VDVLTTML-DP-TIPLT-TAEWEEWGDP---WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPA 697 (758)
Q Consensus 625 ~~~~~-~d~~~~~~-~~-~~~~~-~~~~~e~g~p---~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~ 697 (758)
+.+|+ .|....+. .. ..++. ...|..+.++ ..++.++.|.-++..+.++++++| +|+..|..|+.|||.-..
T Consensus 204 ~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~p-vl~~~gl~D~~cPP~t~f 282 (320)
T PF05448_consen 204 ADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCP-VLFSVGLQDPVCPPSTQF 282 (320)
T ss_dssp EESESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SE-EEEEEETT-SSS-HHHHH
T ss_pred ecCCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCC-EEEEEecCCCCCCchhHH
Confidence 99986 45443221 11 12221 1223333333 356678888888999999999998 999999999999999999
Q ss_pred HHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 698 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 698 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
..+++|.. +.++++|+ ..||... ..... ...++||.++
T Consensus 283 A~yN~i~~---~K~l~vyp---~~~He~~--~~~~~---~~~~~~l~~~ 320 (320)
T PF05448_consen 283 AAYNAIPG---PKELVVYP---EYGHEYG--PEFQE---DKQLNFLKEH 320 (320)
T ss_dssp HHHCC--S---SEEEEEET---T--SSTT--HHHHH---HHHHHHHHH-
T ss_pred HHHhccCC---CeeEEecc---CcCCCch--hhHHH---HHHHHHHhcC
Confidence 99998864 34677776 8899642 21112 2257899875
No 17
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.78 E-value=1.5e-17 Score=172.93 Aligned_cols=241 Identities=17% Similarity=0.139 Sum_probs=154.6
Q ss_pred eEEEEeeCC-CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHH-cCcEEEEEec--CCCCCCc-
Q 004368 486 TERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQI--RGGGELG- 560 (758)
Q Consensus 486 ~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~~~--RG~g~~G- 560 (758)
.+.+.+.|. -+.+++..++.|++. . .++.|+|+++||..+....+.+....+.+++ .|++|+++|. ||.+..|
T Consensus 13 ~~~~~~~s~~~~~~~~~~v~~P~~~-~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~ 90 (275)
T TIGR02821 13 QGFYRHKSETCGVPMTFGVFLPPQA-A-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGE 90 (275)
T ss_pred EEEEEEeccccCCceEEEEEcCCCc-c-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCC
Confidence 345555544 466788888889864 2 3468999999997655544433334456654 6999999997 6665333
Q ss_pred ---------hhHHhccc-ccC--CcChHhHHHHHHHHHHHc-CCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcC
Q 004368 561 ---------RQWYENGK-FLK--KKNTFTDFIACAEYLIKN-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 627 (758)
Q Consensus 561 ---------~~~~~~~~-~~~--~~~~~~D~~~~~~~l~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 627 (758)
..|+.... ... .......+...+..++++ ..+|+++++++|+||||++++.++.++|++|+++++.+
T Consensus 91 ~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~ 170 (275)
T TIGR02821 91 DDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFA 170 (275)
T ss_pred cccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEEC
Confidence 12221110 000 111223334444444444 44788999999999999999999999999999999999
Q ss_pred CccchhhccCCCCCCCChhhhh-ccCCCCCHHHHHHHHhcCcccccCCC-CCCeEEEeccCCCCCCCC-hHHHHHHHHHH
Q 004368 628 PFVDVLTTMLDPTIPLTTAEWE-EWGDPWKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMY-SEPAKFVAKLR 704 (758)
Q Consensus 628 ~~~d~~~~~~~~~~~~~~~~~~-e~g~p~~~~~~~~l~~~sp~~~i~~~-~~P~~Li~~G~~D~~V~~-~~~~~~~~~L~ 704 (758)
|+++.... ++...... .+|.+. +. +..++|...+.+. ..||+||.||+.|++|+. .++..+.++|+
T Consensus 171 ~~~~~~~~------~~~~~~~~~~l~~~~--~~---~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~ 239 (275)
T TIGR02821 171 PIVAPSRC------PWGQKAFSAYLGADE--AA---WRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACR 239 (275)
T ss_pred CccCcccC------cchHHHHHHHhcccc--cc---hhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHH
Confidence 99875321 11111111 123321 11 1234555444432 345699999999999999 68999999999
Q ss_pred hcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 705 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 705 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
+++.+++++.++ +.+|++.. ......+.+.|+.++
T Consensus 240 ~~g~~v~~~~~~---g~~H~f~~----~~~~~~~~~~~~~~~ 274 (275)
T TIGR02821 240 AAGQALTLRRQA---GYDHSYYF----IASFIADHLRHHAER 274 (275)
T ss_pred HcCCCeEEEEeC---CCCccchh----HHHhHHHHHHHHHhh
Confidence 999988877776 88997532 112233346676654
No 18
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.78 E-value=3.6e-17 Score=181.53 Aligned_cols=277 Identities=12% Similarity=0.044 Sum_probs=189.7
Q ss_pred HHHHHHHHhcCchHhHHHHHHHHHccccCCCCCCcEEeCcEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCC
Q 004368 93 ENDYFESAMSGTKKIEDNMFAELKGRIKQEDVSAPFRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDA 172 (758)
Q Consensus 93 en~y~~~~l~~~~~~~~~l~~e~~~~~~~~~~s~p~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 172 (758)
|+.++++++... +.++++..+|...+.....+.|...+..++|.+..+++....++.....+
T Consensus 118 ~~~~~~~~~~~~-~~~~~~a~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g----------------- 179 (417)
T TIGR02800 118 LQLLGKQYTVTA-SQLRRVAHRIADAIYEKLTGERGAFSTRIAYVSKSGKSRRYELQVADYDG----------------- 179 (417)
T ss_pred EEeeeeeEEcCH-HHHHHHHHHHHHHHHHHhcCCCCCcCCEEEEEEEeCCCCcceEEEEcCCC-----------------
Confidence 566667777665 56667777777766666567777778877777665544444455433321
Q ss_pred CCceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEE
Q 004368 173 PPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALV 250 (758)
Q Consensus 173 ~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~ 250 (758)
...+.|++.+.. +..+.|||||++|||+...++ ..+|+++|+++|+.... ...+....++|+||| .|+
T Consensus 180 ~~~~~l~~~~~~--------~~~p~~Spdg~~la~~~~~~~--~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~ 249 (417)
T TIGR02800 180 ANPQTITRSREP--------ILSPAWSPDGQKLAYVSFESG--KPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLA 249 (417)
T ss_pred CCCEEeecCCCc--------eecccCCCCCCEEEEEEcCCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEE
Confidence 245677776532 346789999999999987665 37899999999876554 344444558999999 788
Q ss_pred EEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc
Q 004368 251 YITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV 330 (758)
Q Consensus 251 y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~ 330 (758)
|+.... ...+||.++++++.. ..+... ......+.|+|||++|++.+...+..+||++|+.+++ .+.++....
T Consensus 250 ~~~~~~--~~~~i~~~d~~~~~~--~~l~~~--~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~-~~~l~~~~~ 322 (417)
T TIGR02800 250 VSLSKD--GNPDIYVMDLDGKQL--TRLTNG--PGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE-VRRLTFRGG 322 (417)
T ss_pred EEECCC--CCccEEEEECCCCCE--EECCCC--CCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCCC
Confidence 875432 235699999987643 223221 1222356899999999998877667799999998876 666654322
Q ss_pred c-eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 331 G-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 331 ~-~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
. ....|+|||+.+++..... ..++|+.+++++ +..+ ++..........++++++.|++...+++...+++++.+
T Consensus 323 ~~~~~~~spdg~~i~~~~~~~--~~~~i~~~d~~~-~~~~-~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~ 397 (417)
T TIGR02800 323 YNASPSWSPDGDLIAFVHREG--GGFNIAVMDLDG-GGER-VLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVSTD 397 (417)
T ss_pred CccCeEECCCCCEEEEEEccC--CceEEEEEeCCC-CCeE-EccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEECC
Confidence 2 3445999999998887654 468999999876 2322 33332222233677788899999888888888888765
No 19
>PRK10162 acetyl esterase; Provisional
Probab=99.78 E-value=2.2e-17 Score=174.93 Aligned_cols=234 Identities=15% Similarity=0.095 Sum_probs=159.4
Q ss_pred eeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCC-CCCChHHHHHHH-cCcEEEEEecCCCCCCchh
Q 004368 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQ 562 (758)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~ 562 (758)
.++.+.+++.+| .|++.+++|+.. ..|+||++|||...... ..+...+..|+. .|+.|+.+|||...+..
T Consensus 56 ~~~~~~i~~~~g-~i~~~~y~P~~~-----~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-- 127 (318)
T PRK10162 56 ATRAYMVPTPYG-QVETRLYYPQPD-----SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-- 127 (318)
T ss_pred eEEEEEEecCCC-ceEEEEECCCCC-----CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC--
Confidence 467788888888 599998888532 36999999998644332 345556677777 49999999999876531
Q ss_pred HHhcccccCCcChHhHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhhC------CCceeEEEEcCCccchh
Q 004368 563 WYENGKFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVL 633 (758)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~d~~ 633 (758)
.+..++|+.++++|+.++ -.+|++||+|+|+|+||.++++++.+. +..++++|+.+|++|+.
T Consensus 128 ---------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 128 ---------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred ---------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCC
Confidence 234579999999998764 346899999999999999998888653 35789999999998853
Q ss_pred hccC----CCCC-CCChhhh----hcc-CCCCCHHHHHHHHhcCccccc--CC--CCCCeEEEeccCCCCCCCChHHHHH
Q 004368 634 TTML----DPTI-PLTTAEW----EEW-GDPWKEEFYFYMKSYSPVDNV--KA--QNYPHILVTAGLNDPRVMYSEPAKF 699 (758)
Q Consensus 634 ~~~~----~~~~-~~~~~~~----~e~-g~p~~~~~~~~l~~~sp~~~i--~~--~~~P~~Li~~G~~D~~V~~~~~~~~ 699 (758)
.... .... .++...+ ..| +++.+ ..+|+... .. ...||++|++|++|+.++ +++.|
T Consensus 199 ~~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~~--------~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~ 268 (318)
T PRK10162 199 DSVSRRLLGGVWDGLTQQDLQMYEEAYLSNDAD--------RESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLL 268 (318)
T ss_pred CChhHHHhCCCccccCHHHHHHHHHHhCCCccc--------cCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHH
Confidence 2100 0000 1111111 011 22111 12333211 11 246889999999999864 99999
Q ss_pred HHHHHhcCCCCceEEEEecCCCCCCCCC--C-hHHHHHHHHHHHHHHHHhcC
Q 004368 700 VAKLREMKTDDNILLFKCELGAGHFSKS--G-RFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 700 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~-~~~~~~~~~~~~~fl~~~l~ 748 (758)
+++|+++|++++++.++ +..|++.. . -....+...++.+||.++|+
T Consensus 269 ~~~L~~aGv~v~~~~~~---g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 269 YQTLAAHQQPCEFKLYP---GTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHcCCCEEEEEEC---CCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 99999999998888886 89997632 1 12333344556789988875
No 20
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.77 E-value=5.1e-16 Score=172.18 Aligned_cols=205 Identities=12% Similarity=0.128 Sum_probs=148.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..+.|||||++|||+...+| ..+||++|+.+|+...+ ..++....++||||| +|+|+.... ...+||.+++.+
T Consensus 220 ~~~p~wSPDG~~La~~s~~~g--~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~--g~~~Iy~~dl~t 295 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFENR--KAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKD--GQPEIYVVDIAT 295 (448)
T ss_pred ccCceECCCCCEEEEEEecCC--CcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCC--CCeEEEEEECCC
Confidence 457899999999999988765 47899999999987655 344445568999999 798876543 235799999987
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecc-ccceeeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVDTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~~s~dg~~l~~~s~~ 349 (758)
+. ...+... ......+.|||||++|++.+...+..+||++|+++++ .+.++.. .......|+|||++|+|.+..
T Consensus 296 g~--~~~lt~~--~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~-~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~ 370 (448)
T PRK04792 296 KA--LTRITRH--RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK-VSRLTFEGEQNLGGSITPDGRSMIMVNRT 370 (448)
T ss_pred CC--eEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEEecCCCCCcCeeECCCCCEEEEEEec
Confidence 63 2333222 1223457899999999999877777899999998887 6666532 222234599999999998765
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
. ..++|+++++++. ..+.+.....+. -..++++++.+++....++...+++++++ |.
T Consensus 371 ~--g~~~I~~~dl~~g-~~~~lt~~~~d~-~ps~spdG~~I~~~~~~~g~~~l~~~~~~--G~ 427 (448)
T PRK04792 371 N--GKFNIARQDLETG-AMQVLTSTRLDE-SPSVAPNGTMVIYSTTYQGKQVLAAVSID--GR 427 (448)
T ss_pred C--CceEEEEEECCCC-CeEEccCCCCCC-CceECCCCCEEEEEEecCCceEEEEEECC--CC
Confidence 4 3578999998763 333344332222 23677788899988888888888888775 55
No 21
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=3.7e-16 Score=171.95 Aligned_cols=207 Identities=12% Similarity=0.033 Sum_probs=140.8
Q ss_pred eeEEECCCCCE--EEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEE--E
Q 004368 194 GCFQVSPDNKL--VAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH--K 267 (758)
Q Consensus 194 ~~~~~SPDG~~--lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~--~ 267 (758)
..|.|||||+. ++|++.++| ..+||++++++|+..++ ..++....++||||| +|+|+....+ ..++|.+ +
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g--~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g--~~di~~~~~~ 263 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLG--VPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYG--NPDLFIQSFS 263 (428)
T ss_pred ccceEccCCCceEEEEEEccCC--CceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCC--CcceeEEEee
Confidence 57899999988 566888777 47999999999987765 345555568999999 8999875332 2246654 4
Q ss_pred cCCCC-CCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccc-eeeEEeecCCEEE
Q 004368 268 LEADQ-SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG-VDTAASHRGNHFF 344 (758)
Q Consensus 268 l~~~~-~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~-~~~~~s~dg~~l~ 344 (758)
+.++. .+...+.... ......+.|||||++|+|.+...+..+||+++++... ..+.++..... ....|||||++|+
T Consensus 264 ~~~g~~g~~~~lt~~~-~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~La 342 (428)
T PRK01029 264 LETGAIGKPRRLLNEA-FGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIA 342 (428)
T ss_pred cccCCCCcceEeecCC-CCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEE
Confidence 43321 1233344322 1222357899999999998876667889999886322 25666554322 3456999999999
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
|.+..++ ..+|+++|+++. ..+.+...........++++++.|++....++...+++++++
T Consensus 343 f~~~~~g--~~~I~v~dl~~g-~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~ 403 (428)
T PRK01029 343 FCSVIKG--VRQICVYDLATG-RDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLI 403 (428)
T ss_pred EEEcCCC--CcEEEEEECCCC-CeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECC
Confidence 9987653 578999999763 334454332222233455566788888777777788888887
No 22
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.75 E-value=8.2e-16 Score=167.99 Aligned_cols=204 Identities=10% Similarity=0.022 Sum_probs=148.3
Q ss_pred EeeEEECCCCCE-EEEEEeCCCCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 193 VGCFQVSPDNKL-VAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 193 i~~~~~SPDG~~-lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
...+.|||||++ ++|+...++ ..+||++|+++|+...++ .++....+.||||| +++|+.... ...++|.+++.
T Consensus 190 ~~~p~wSpDG~~~i~y~s~~~~--~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~dl~ 265 (419)
T PRK04043 190 NIFPKWANKEQTAFYYTSYGER--KPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPK--GQPDIYLYDTN 265 (419)
T ss_pred eEeEEECCCCCcEEEEEEccCC--CCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccC--CCcEEEEEECC
Confidence 347899999996 666666544 359999999999987763 34445568999999 898887543 24679999987
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEcC
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRS 349 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~ 349 (758)
++. ...+.... .....+.|||||++|+|.++..+..+||++|+++++ .++++.... ....|||||+.|++.+..
T Consensus 266 ~g~--~~~LT~~~--~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~-~~rlt~~g~-~~~~~SPDG~~Ia~~~~~ 339 (419)
T PRK04043 266 TKT--LTQITNYP--GIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS-VEQVVFHGK-NNSSVSTYKNYIVYSSRE 339 (419)
T ss_pred CCc--EEEcccCC--CccCccEECCCCCEEEEEECCCCCceEEEEECCCCC-eEeCccCCC-cCceECCCCCEEEEEEcC
Confidence 763 33333222 123456899999999999988888899999999887 666654321 234699999999999876
Q ss_pred CCC----CCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 350 DEL----FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 350 ~~~----~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
... ..++|+.+++++. ..+.++....+ ....|+++++.+++.....+...+.+++++
T Consensus 340 ~~~~~~~~~~~I~v~d~~~g-~~~~LT~~~~~-~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 340 TNNEFGKNTFNLYLISTNSD-YIRRLTANGVN-QFPRFSSDGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred CCcccCCCCcEEEEEECCCC-CeEECCCCCCc-CCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence 421 2379999999763 34445544322 245678888899988888888888888887
No 23
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.75 E-value=1.3e-16 Score=185.51 Aligned_cols=201 Identities=15% Similarity=0.166 Sum_probs=142.9
Q ss_pred HHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHc---------------CCCCCCcEEEEEe
Q 004368 538 RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---------------CYCTKEKLCIEGR 602 (758)
Q Consensus 538 ~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---------------~~~d~~~i~i~G~ 602 (758)
...|+.+||+|++.|.||.++++..|.. .+..+.+|..++|+||..+ .|. .++||++|.
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~Ws-nGkVGm~G~ 345 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWS-NGKVAMTGK 345 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHHhhCCccccccccccccccCCC-CCeeEEEEE
Confidence 4689999999999999999988766542 3356779999999999843 343 489999999
Q ss_pred ChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCC---C--CCh--hh-hhc--------cCCC-CC---------
Q 004368 603 SAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI---P--LTT--AE-WEE--------WGDP-WK--------- 656 (758)
Q Consensus 603 S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~---~--~~~--~~-~~e--------~g~p-~~--------- 656 (758)
||||+++.++|+..|+.++|+|..+++.|+..++..... + +.. .. +.+ .|.. ..
T Consensus 346 SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~~~ 425 (767)
T PRK05371 346 SYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKLLA 425 (767)
T ss_pred cHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHHHh
Confidence 999999999999889999999999999887543321110 0 000 00 000 0000 00
Q ss_pred ----------HHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Q 004368 657 ----------EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 726 (758)
Q Consensus 657 ----------~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 726 (758)
+..-+++.+.++..++.++++| +|++||.+|.+|++.++.+++++|++++.+.++++. ..+|...
T Consensus 426 ~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvP-vLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~----~g~H~~~ 500 (767)
T PRK05371 426 ELTAAQDRKTGDYNDFWDDRNYLKDADKIKAS-VLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH----QGGHVYP 500 (767)
T ss_pred hhhhhhhhcCCCccHHHHhCCHhhHhhCCCCC-EEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe----CCCccCC
Confidence 0111234556777888899998 999999999999999999999999998888776554 5688653
Q ss_pred CChHHHHHHHHHHHHHHHHhcCCC
Q 004368 727 SGRFERLREAAFTYTFLMRALSML 750 (758)
Q Consensus 727 ~~~~~~~~~~~~~~~fl~~~l~~~ 750 (758)
... ...+....+.+||.++|+..
T Consensus 501 ~~~-~~~d~~e~~~~Wfd~~LkG~ 523 (767)
T PRK05371 501 NNW-QSIDFRDTMNAWFTHKLLGI 523 (767)
T ss_pred Cch-hHHHHHHHHHHHHHhccccC
Confidence 221 22222334689999998643
No 24
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.74 E-value=2.5e-17 Score=164.40 Aligned_cols=192 Identities=11% Similarity=0.116 Sum_probs=127.5
Q ss_pred EEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHH-HcCcEEEEEecCCCCCCch--hHHhcccccCCcChHhH
Q 004368 502 CIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLL-DRGFIFAIAQIRGGGELGR--QWYENGKFLKKKNTFTD 578 (758)
Q Consensus 502 ~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~~~RG~g~~G~--~~~~~~~~~~~~~~~~D 578 (758)
+++.|++. +++.|+||++||+.+.............++ +.||+|+.+|+||++..+. .|..............|
T Consensus 2 ~ly~P~~~---~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 2 YVYVPAGL---TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred EEEcCCCC---CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 56667764 467899999999765433221111133444 4699999999999875443 33332222223356788
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHH
Q 004368 579 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 658 (758)
Q Consensus 579 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~ 658 (758)
+...++++.++..+|++||+|+|+|+||+++..++.++|++|+++++.++..-.... .... ...+...+....
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~----~~~~---~~~~~~~~~~~~ 151 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS----SSIS---ATPQMCTAATAA 151 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc----cchh---hHhhcCCCCCHH
Confidence 899999999988899999999999999999999999999999999888875321110 0000 011111122222
Q ss_pred HHHHH-HhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhc
Q 004368 659 FYFYM-KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 706 (758)
Q Consensus 659 ~~~~l-~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~ 706 (758)
.+..+ .... .-.....|+++|+||.+|.+||+..+++++++|++.
T Consensus 152 ~~~~~~~~~~---~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQ---SEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccC---CcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 22222 2111 111225777899999999999999999999999986
No 25
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.74 E-value=1.2e-16 Score=172.63 Aligned_cols=252 Identities=15% Similarity=0.131 Sum_probs=154.8
Q ss_pred CceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchh
Q 004368 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (758)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 562 (758)
++..++....+.||.+|......|++. .+.|+||++||..+ .....|......|+++||.|+.+|+||+|.+...
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~----~~~~~iv~lHG~~~-~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~ 132 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENS----RPKAAVCFCHGYGD-TCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGL 132 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCC----CCCeEEEEECCCCC-ccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCC
Confidence 344455556667999998877766542 35689999999533 2222234555678888999999999999876421
Q ss_pred HHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCC----
Q 004368 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD---- 638 (758)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~---- 638 (758)
. +....-..-++|+.+.++.+..+...+..++.++|+|+||.+++.++.++|++++++|+.+|+.........
T Consensus 133 ~---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 133 H---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred C---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH
Confidence 0 000011122456666666665543344568999999999999999999999999999999886532110000
Q ss_pred -----------CCCCCC-hhhhhc--cCCC-----------------CCHHHHHHHHhc-CcccccCCCCCCeEEEeccC
Q 004368 639 -----------PTIPLT-TAEWEE--WGDP-----------------WKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGL 686 (758)
Q Consensus 639 -----------~~~~~~-~~~~~e--~g~p-----------------~~~~~~~~l~~~-sp~~~i~~~~~P~~Li~~G~ 686 (758)
+...+. ...+.+ +.++ .-...++.++.. .....+.++++| +||+||+
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P-~Lii~G~ 288 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLP-LLILHGE 288 (349)
T ss_pred HHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCC-EEEEEeC
Confidence 000000 000000 0000 001111112111 112345667898 9999999
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHH--HHHHHHHHHHHHHhcC
Q 004368 687 NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER--LREAAFTYTFLMRALS 748 (758)
Q Consensus 687 ~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~--~~~~~~~~~fl~~~l~ 748 (758)
+|..||+..++++++++... +.++++++ ++||......... .+-..++.+||.+++.
T Consensus 289 ~D~vv~~~~~~~l~~~~~~~--~~~l~~i~---~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 289 ADKVTDPSVSKFLYEKASSS--DKKLKLYE---DAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred CCCccChHHHHHHHHHcCCC--CceEEEeC---CCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999999998877532 34567776 8999875333322 2234457899998864
No 26
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=5.6e-15 Score=163.26 Aligned_cols=205 Identities=11% Similarity=0.041 Sum_probs=146.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..++|||||++|||+....| ..+|+++|+.+|+...+ ..++....+.||||| +|+|+.... ...+||.+++.+
T Consensus 201 ~~~p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~--g~~~I~~~d~~t 276 (429)
T PRK03629 201 LMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLAS 276 (429)
T ss_pred eeeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCC--CCcEEEEEECCC
Confidence 568999999999999987665 47899999999987665 344545569999999 888876532 234699999977
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~ 349 (758)
+. ...+... . .....+.|||||++|++.++..+..+||.+|+++++ .+.++..... ....|+|||++|++.+..
T Consensus 277 g~--~~~lt~~-~-~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~ 351 (429)
T PRK03629 277 GQ--IRQVTDG-R-SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSN 351 (429)
T ss_pred CC--EEEccCC-C-CCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEEcc
Confidence 63 2333322 2 223467899999999998887777899999998876 6666543222 234599999999998876
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
++ ...|+.+|+++. ..+.+... ....-..+++++..+++...+.+...+++++++ |.
T Consensus 352 ~g--~~~I~~~dl~~g-~~~~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~--G~ 408 (429)
T PRK03629 352 GG--QQHIAKQDLATG-GVQVLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD--GR 408 (429)
T ss_pred CC--CceEEEEECCCC-CeEEeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECC--CC
Confidence 52 468999998763 33334432 222234677777888888877777778888886 55
No 27
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.73 E-value=2.4e-15 Score=167.13 Aligned_cols=203 Identities=14% Similarity=0.123 Sum_probs=144.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..+.|||||++|||+...+|. .+||++|+++|+...++ .++....+.||||| +|+|+.... ...+||.+++.+
T Consensus 204 v~~p~wSpDG~~lay~s~~~g~--~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~d~~~ 279 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANGR--PRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQG--GNTDIYTMDLRS 279 (435)
T ss_pred eEeeEECCCCCEEEEEEecCCC--CEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecC--CCceEEEEECCC
Confidence 5679999999999999887663 79999999999876653 44445568999999 888886543 245799999987
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~ 349 (758)
+. ...+... ......+.|||||++|+|.+...+..+||++|+++++ .+.++..... ....|+|||++|++.+..
T Consensus 280 ~~--~~~Lt~~--~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~-~~~lt~~~~~~~~~~~SpdG~~ia~~~~~ 354 (435)
T PRK05137 280 GT--TTRLTDS--PAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN-PRRISFGGGRYSTPVWSPRGDLIAFTKQG 354 (435)
T ss_pred Cc--eEEccCC--CCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC-eEEeecCCCcccCeEECCCCCEEEEEEcC
Confidence 63 2333322 2223357899999999998877777899999998876 7777653222 234599999999998865
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCe---eEEEEEEcC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGL---QKITTYRLP 408 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~l~v~~l~ 408 (758)
. ..++|+.+++++. .. .++.......-..|+++++.+++.....+. ..+++++++
T Consensus 355 ~--~~~~i~~~d~~~~-~~-~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~ 412 (435)
T PRK05137 355 G--GQFSIGVMKPDGS-GE-RILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT 412 (435)
T ss_pred C--CceEEEEEECCCC-ce-EeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence 4 2578999998652 22 333333232334566667788877765554 578888776
No 28
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=1.4e-16 Score=154.45 Aligned_cols=209 Identities=21% Similarity=0.257 Sum_probs=152.3
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCC-CChHHHHHHH-cCcEEEEEecCCCCCCchhH
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLD-RGFIFAIAQIRGGGELGRQW 563 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~-~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~ 563 (758)
.+.+..++..|..+-+..+.|+.. ..+++||.||- .. +.+ .......|.. .++.++..||+|.|..+..
T Consensus 35 v~v~~~~t~rgn~~~~~y~~~~~~-----~~~~lly~hGN--a~-Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~- 105 (258)
T KOG1552|consen 35 VEVFKVKTSRGNEIVCMYVRPPEA-----AHPTLLYSHGN--AA-DLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGK- 105 (258)
T ss_pred cceEEeecCCCCEEEEEEEcCccc-----cceEEEEcCCc--cc-chHHHHHHHHHHhhcccceEEEEecccccccCCC-
Confidence 345556666777776665655432 46999999994 21 221 1111223333 3899999999998876543
Q ss_pred HhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCC
Q 004368 564 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPL 643 (758)
Q Consensus 564 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~ 643 (758)
....+.++|+.++.+||.+... .+++|+++|+|+|...+..++.++| .+|+|+.+||++.++.+... ..
T Consensus 106 ------psE~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~--~~ 174 (258)
T KOG1552|consen 106 ------PSERNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPD--TK 174 (258)
T ss_pred ------cccccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccC--cc
Confidence 2234888999999999999876 8899999999999999999999988 89999999999987765321 11
Q ss_pred ChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCC
Q 004368 644 TTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGH 723 (758)
Q Consensus 644 ~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 723 (758)
+...+. .+.-++.|+.+++| +||+||+.|++|++.|+.+++++.+.. .++++.+ ++||
T Consensus 175 ~~~~~d---------------~f~~i~kI~~i~~P-VLiiHgtdDevv~~sHg~~Lye~~k~~---~epl~v~---g~gH 232 (258)
T KOG1552|consen 175 TTYCFD---------------AFPNIEKISKITCP-VLIIHGTDDEVVDFSHGKALYERCKEK---VEPLWVK---GAGH 232 (258)
T ss_pred eEEeec---------------cccccCcceeccCC-EEEEecccCceecccccHHHHHhcccc---CCCcEEe---cCCC
Confidence 100111 12226677788998 999999999999999999999998764 5677777 9999
Q ss_pred CCCCChHHHHHHH
Q 004368 724 FSKSGRFERLREA 736 (758)
Q Consensus 724 ~~~~~~~~~~~~~ 736 (758)
....-..+.++..
T Consensus 233 ~~~~~~~~yi~~l 245 (258)
T KOG1552|consen 233 NDIELYPEYIEHL 245 (258)
T ss_pred cccccCHHHHHHH
Confidence 8765555666654
No 29
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=3.9e-15 Score=162.70 Aligned_cols=241 Identities=10% Similarity=0.055 Sum_probs=167.8
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-e-EEEEEeCCCCCCceEEEEEcCCCCCCcEEEee
Q 004368 203 KLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-A-LVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (758)
Q Consensus 203 ~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~-l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~ 280 (758)
+++||.+...|...++|+++|.++......+..+....+.||||| + ++|++... +..+||++++.+++ ...+..
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~--~~~~Iyv~dl~tg~--~~~lt~ 230 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGGLNIFPKWANKEQTAFYYTSYGE--RKPTLYKYNLYTGK--KEKIAS 230 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccCCCeEeEEECCCCCcEEEEEEccC--CCCEEEEEECCCCc--EEEEec
Confidence 577888775554468999999988876655434445568999999 6 66666543 23479999998773 444543
Q ss_pred ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCcEEEE
Q 004368 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 359 (758)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~~L~~ 359 (758)
. +.....+.|||||++|++.....+..+||++|+++++ .++++.... .....|+|||++|+|.+++.+ ..+||+
T Consensus 231 ~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g--~~~Iy~ 305 (419)
T PRK04043 231 S--QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLG--YPNIFM 305 (419)
T ss_pred C--CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-EEEcccCCCccCccEECCCCCEEEEEECCCC--CceEEE
Confidence 2 2233356799999999998877777899999998887 788876543 345569999999999999863 468999
Q ss_pred EeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeC------CeeEEEEEEcCCCCCccccccCCceeeccCcccccC
Q 004368 360 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREG------GLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSID 433 (758)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~------g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~ 433 (758)
+++++ +..+.++.... . ...++++++.+++..... +..++++++++ ++..+.|+.. . ...
T Consensus 306 ~dl~~-g~~~rlt~~g~-~-~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~--~g~~~~LT~~--------~-~~~ 371 (419)
T PRK04043 306 KKLNS-GSVEQVVFHGK-N-NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTN--SDYIRRLTAN--------G-VNQ 371 (419)
T ss_pred EECCC-CCeEeCccCCC-c-CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECC--CCCeEECCCC--------C-CcC
Confidence 99986 34434443322 2 247888999998887654 33578888876 4433333321 1 122
Q ss_pred CCCcccCCcEEEEEEecCCCCCEEEEEECCCCcE
Q 004368 434 PSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (758)
Q Consensus 434 ~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~ 467 (758)
.+++++|+..+.|.... ..-..++.+++.+...
T Consensus 372 ~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~~~ 404 (419)
T PRK04043 372 FPRFSSDGGSIMFIKYL-GNQSALGIIRLNYNKS 404 (419)
T ss_pred CeEECCCCCEEEEEEcc-CCcEEEEEEecCCCee
Confidence 36678999988887554 3345688999877653
No 30
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.72 E-value=3.2e-16 Score=157.38 Aligned_cols=216 Identities=17% Similarity=0.187 Sum_probs=160.7
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCc------
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG------ 560 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G------ 560 (758)
+.+.+++.| .++++++.+|+.. ++.|+||++|+-+|... ........|+..||+|++||+=+..+..
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~~~----~~~P~VIv~hei~Gl~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~ 75 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPAGA----GGFPGVIVLHEIFGLNP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDE 75 (236)
T ss_pred cceEeeCCC-ceEeEEEecCCcC----CCCCEEEEEecccCCch--HHHHHHHHHHhCCcEEEechhhccCCCCCccccc
Confidence 456777777 7899999999875 34499999999777543 4556678999999999999985422211
Q ss_pred hhHHhcc--cccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCC
Q 004368 561 RQWYENG--KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD 638 (758)
Q Consensus 561 ~~~~~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~ 638 (758)
......+ ..........|+.++++||..++.+++++|+++|+|+||.+++.++.+.| .++|+++..|..-...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~---- 150 (236)
T COG0412 76 PAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD---- 150 (236)
T ss_pred HHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc----
Confidence 1122211 01111467899999999999999999999999999999999999999877 7899998887421000
Q ss_pred CCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEec
Q 004368 639 PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 718 (758)
Q Consensus 639 ~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 718 (758)
.....++++| +|+.+|..|+.+|.....++.+++.+++..+++.+|.
T Consensus 151 ------------------------------~~~~~~~~~p-vl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~-- 197 (236)
T COG0412 151 ------------------------------TADAPKIKVP-VLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYP-- 197 (236)
T ss_pred ------------------------------ccccccccCc-EEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeC--
Confidence 0004456787 9999999999999999999999999998777777776
Q ss_pred CCCCCCCCCC---------hHHHHHHHHHHHHHHHHhcC
Q 004368 719 LGAGHFSKSG---------RFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 719 ~~~gH~~~~~---------~~~~~~~~~~~~~fl~~~l~ 748 (758)
++.|++... ....-..+.+..+||.++++
T Consensus 198 -ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 198 -GAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred -CCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 788977532 12223335556889988875
No 31
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=5.2e-15 Score=164.58 Aligned_cols=203 Identities=14% Similarity=0.155 Sum_probs=147.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..+.|||||++|||+...++ ..+||++|+++|+..... ..+....+.||||| +|+|+....+ ..+||..++.+
T Consensus 201 ~~~p~wSpDG~~la~~s~~~~--~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g--~~~Iy~~d~~~ 276 (430)
T PRK00178 201 ILSPRWSPDGKRIAYVSFEQK--RPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG--NPEIYVMDLAS 276 (430)
T ss_pred eeeeeECCCCCEEEEEEcCCC--CCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCC--CceEEEEECCC
Confidence 567899999999999987665 478999999999876653 34444568999999 8888765432 35799999987
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccc-cceeeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~ 349 (758)
+. ...+... ......+.|||||++|+|.++..+..+||++|+.+++ .+.++... ......|+|||+++++.+..
T Consensus 277 ~~--~~~lt~~--~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~-~~~lt~~~~~~~~~~~Spdg~~i~~~~~~ 351 (430)
T PRK00178 277 RQ--LSRVTNH--PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR-AERVTFVGNYNARPRLSADGKTLVMVHRQ 351 (430)
T ss_pred CC--eEEcccC--CCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCCCCccceEECCCCCEEEEEEcc
Confidence 63 2333322 2223457899999999999877777899999998887 66665322 12234599999999998876
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
++ .++|+.+|+++. ..+.+.....+. ...++++++.+++...+++...+++++++
T Consensus 352 ~~--~~~l~~~dl~tg-~~~~lt~~~~~~-~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 352 DG--NFHVAAQDLQRG-SVRILTDTSLDE-SPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CC--ceEEEEEECCCC-CEEEccCCCCCC-CceECCCCCEEEEEEecCCceEEEEEECC
Confidence 52 578999998763 333344332222 34677778889888888888888888876
No 32
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=2.7e-15 Score=165.10 Aligned_cols=252 Identities=13% Similarity=0.119 Sum_probs=168.7
Q ss_pred eEEECCCCCEEEEEEeCCCCe----EEEEEEEECCCCceeeccccC-cceeEEEecCC-e--EEEEEeCCCCCCceEEEE
Q 004368 195 CFQVSPDNKLVAYAEDTKGDE----IYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE-A--LVYITMDEILRPDKAWLH 266 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e----~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg-~--l~y~~~~~~~~~~~v~~~ 266 (758)
.+.++ +++|||+....+.+ .++||++|.+++..++++... ....+.||||| + ++|++...+ ..+||++
T Consensus 141 ~~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g--~~~I~~~ 216 (428)
T PRK01029 141 VPGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLG--VPKIFLG 216 (428)
T ss_pred CCccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCC--CceEEEE
Confidence 34455 99999998765422 469999999999887765432 34568999999 5 677876442 3579999
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEE--eCCCCC--ceEEeeccccc--eeeEEeecC
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL--DVSKPE--ELRVLTPRVVG--VDTAASHRG 340 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~--d~~~~~--~~~~l~~~~~~--~~~~~s~dg 340 (758)
++.++.. ..+..... ....+.|||||++|++.+...+..++|+. +++++. ..+.++....+ ..+.|||||
T Consensus 217 ~l~~g~~--~~lt~~~g--~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG 292 (428)
T PRK01029 217 SLENPAG--KKILALQG--NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDG 292 (428)
T ss_pred ECCCCCc--eEeecCCC--CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCC
Confidence 9988743 33332211 22357899999999998876666678874 555421 35666654322 345699999
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCCCc-ceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccC
Q 004368 341 NHFFITRRSDELFNSELLACPVDNTSE-TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQG 419 (758)
Q Consensus 341 ~~l~~~s~~~~~~~~~L~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~ 419 (758)
++|+|.++.++ ..+||.++++..+. .+.+...........++++++.|++....+|..+++++++. ++..+.++
T Consensus 293 ~~Laf~s~~~g--~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~--~g~~~~Lt- 367 (428)
T PRK01029 293 TRLVFVSNKDG--RPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLA--TGRDYQLT- 367 (428)
T ss_pred CEEEEEECCCC--CceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECC--CCCeEEcc-
Confidence 99999998753 46899988753222 23344333333345678888899988887787889999887 33222222
Q ss_pred CceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcE
Q 004368 420 GKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (758)
Q Consensus 420 ~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~ 467 (758)
.....+..+.+++|++.++|.... .....+|.+|+.+++.
T Consensus 368 -------~~~~~~~~p~wSpDG~~L~f~~~~-~g~~~L~~vdl~~g~~ 407 (428)
T PRK01029 368 -------TSPENKESPSWAIDSLHLVYSAGN-SNESELYLISLITKKT 407 (428)
T ss_pred -------CCCCCccceEECCCCCEEEEEECC-CCCceEEEEECCCCCE
Confidence 111123446778899888876654 3447899999988774
No 33
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.72 E-value=2.7e-17 Score=165.09 Aligned_cols=205 Identities=19% Similarity=0.192 Sum_probs=136.0
Q ss_pred EEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCC-CchhHHhcc--c----ccC
Q 004368 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE-LGRQWYENG--K----FLK 571 (758)
Q Consensus 499 i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~-~G~~~~~~~--~----~~~ 571 (758)
+.+++..|++. ++.|.||++|+.+|.. +.....+..|+++||.|+++|+-++.. ......+.. . ...
T Consensus 1 ~~ay~~~P~~~----~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~ 74 (218)
T PF01738_consen 1 IDAYVARPEGG----GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPR 74 (218)
T ss_dssp EEEEEEEETTS----SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHS
T ss_pred CeEEEEeCCCC----CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhh
Confidence 46788888753 6789999999988754 223334568899999999999865544 111111100 0 011
Q ss_pred CcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhcc
Q 004368 572 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW 651 (758)
Q Consensus 572 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~ 651 (758)
......|+.+++++|.+++.++.+||+++|+|+||.++..++.+. +.++|+|+..|...
T Consensus 75 ~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~-------------------- 133 (218)
T PF01738_consen 75 PEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP-------------------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS--------------------
T ss_pred HHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC--------------------
Confidence 124568889999999999888999999999999999999988876 68999999888000
Q ss_pred CCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCCh--
Q 004368 652 GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGR-- 729 (758)
Q Consensus 652 g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~-- 729 (758)
...+.....+++.| +|+++|++|+.++..+..++.++|++++.+.++.+|+ +++|++....
T Consensus 134 -------------~~~~~~~~~~~~~P-~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~---ga~HgF~~~~~~ 196 (218)
T PF01738_consen 134 -------------PPPPLEDAPKIKAP-VLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYP---GAGHGFANPSRP 196 (218)
T ss_dssp -------------GGGHHHHGGG--S--EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEET---T--TTTTSTTST
T ss_pred -------------CCcchhhhcccCCC-EeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECC---CCcccccCCCCc
Confidence 00111123334577 9999999999999999999999999999988888886 9999884322
Q ss_pred ----HHHHHHHHHHHHHHHHhc
Q 004368 730 ----FERLREAAFTYTFLMRAL 747 (758)
Q Consensus 730 ----~~~~~~~~~~~~fl~~~l 747 (758)
...-+...+..+||.++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 223333555678887765
No 34
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=5.2e-15 Score=164.45 Aligned_cols=245 Identities=12% Similarity=0.128 Sum_probs=171.4
Q ss_pred CCEEEEEEeCCCCe--EEEEEEEECCCCceeecccc-CcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEE
Q 004368 202 NKLVAYAEDTKGDE--IYTVYVIDIETGTPVGKPLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (758)
Q Consensus 202 G~~lAy~~~~~G~e--~~~l~v~dl~~g~~~~~~~~-~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~ 277 (758)
..+|||..+..|.. ..+|+++|.+++....++.. .....+.||||| +|+|++...+ ..+||++++.++.. ..
T Consensus 165 ~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g--~~~i~~~dl~~g~~--~~ 240 (435)
T PRK05137 165 DTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANG--RPRVYLLDLETGQR--EL 240 (435)
T ss_pred CCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCC--CCEEEEEECCCCcE--EE
Confidence 56899998876643 67999999988877665432 335669999999 8999986533 35799999987632 33
Q ss_pred EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCcE
Q 004368 278 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSE 356 (758)
Q Consensus 278 v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~~ 356 (758)
+... +.....+.|||||+.|++.....+..+||++|++++. .+.++.... .....|+|||++|+|.+++.+ ..+
T Consensus 241 l~~~--~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g--~~~ 315 (435)
T PRK05137 241 VGNF--PGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT-TTRLTDSPAIDTSPSYSPDGSQIVFESDRSG--SPQ 315 (435)
T ss_pred eecC--CCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc-eEEccCCCCccCceeEcCCCCEEEEEECCCC--CCe
Confidence 3222 1223357899999999998777777899999999886 777775432 223569999999999988753 468
Q ss_pred EEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCC
Q 004368 357 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE 436 (758)
Q Consensus 357 L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~ 436 (758)
||++++++ +..+.+...........++++++.+++.....+...+++++++ ++... .+. . ...+..++
T Consensus 316 Iy~~d~~g-~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~--~~~~~------~lt--~-~~~~~~p~ 383 (435)
T PRK05137 316 LYVMNADG-SNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPD--GSGER------ILT--S-GFLVEGPT 383 (435)
T ss_pred EEEEECCC-CCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECC--CCceE------ecc--C-CCCCCCCe
Confidence 99999876 3334454433333334677788899888776676778888875 43221 121 1 11344567
Q ss_pred cccCCcEEEEEEecCCCC--CEEEEEECCCCcE
Q 004368 437 SVFSSRILRFHYSSLRTP--PSVYDYDMDMGIS 467 (758)
Q Consensus 437 ~~~d~~~l~~~~sS~~~P--~~i~~~d~~~~~~ 467 (758)
+++|++.++|........ ..+|.+|+.+++.
T Consensus 384 ~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 384 WAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred ECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 889999998877655443 5899999987764
No 35
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=1.8e-15 Score=167.39 Aligned_cols=203 Identities=13% Similarity=0.097 Sum_probs=146.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..++|||||++|||+...++ ..+||++|+.+|+....+ .++....++||||| +|+|+...+ ...+||..++.+
T Consensus 198 v~~p~wSPDG~~la~~s~~~~--~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~d~~~ 273 (427)
T PRK02889 198 IISPAWSPDGTKLAYVSFESK--KPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRD--GNSQIYTVNADG 273 (427)
T ss_pred cccceEcCCCCEEEEEEccCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccC--CCceEEEEECCC
Confidence 457899999999999987655 478999999999876653 44455668999999 888876543 245799988876
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccc-cceeeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~ 349 (758)
+. ...+.. .. .....+.|||||++|++.++..+..+||.++++++. .+.++... ......|||||++|++.++.
T Consensus 274 ~~--~~~lt~-~~-~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~ 348 (427)
T PRK02889 274 SG--LRRLTQ-SS-GIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA-AQRVTFTGSYNTSPRISPDGKLLAYISRV 348 (427)
T ss_pred CC--cEECCC-CC-CCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc-eEEEecCCCCcCceEECCCCCEEEEEEcc
Confidence 53 233322 21 223357899999999998877777899999998776 55555322 12335699999999998876
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
++ .++|+++++++. ....++....+ ....++++++.|++.....|...+++++++
T Consensus 349 ~g--~~~I~v~d~~~g-~~~~lt~~~~~-~~p~~spdg~~l~~~~~~~g~~~l~~~~~~ 403 (427)
T PRK02889 349 GG--AFKLYVQDLATG-QVTALTDTTRD-ESPSFAPNGRYILYATQQGGRSVLAAVSSD 403 (427)
T ss_pred CC--cEEEEEEECCCC-CeEEccCCCCc-cCceECCCCCEEEEEEecCCCEEEEEEECC
Confidence 52 478999998763 33445433222 234667777889988888888888888775
No 36
>PHA02857 monoglyceride lipase; Provisional
Probab=99.70 E-value=6.5e-16 Score=161.28 Aligned_cols=238 Identities=16% Similarity=0.127 Sum_probs=150.8
Q ss_pred eeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhccccc
Q 004368 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL 570 (758)
Q Consensus 491 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~ 570 (758)
+.+.||..+++.++.|.+ .+.|+|+++||.... ...|...+..|+++||.|+.+|+||+|...... ....
T Consensus 5 ~~~~~g~~l~~~~~~~~~-----~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~ 74 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT-----YPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMID 74 (276)
T ss_pred eecCCCCEEEEEeccCCC-----CCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcC
Confidence 345699999998765532 356899999995433 344666777888899999999999998754310 0001
Q ss_pred CCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhc-------------cC
Q 004368 571 KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-------------ML 637 (758)
Q Consensus 571 ~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~-------------~~ 637 (758)
.-...++|+...++++.+.. ..+++.++|+|+||.++..++.++|++++++|+.+|+.+.... ..
T Consensus 75 ~~~~~~~d~~~~l~~~~~~~--~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~ 152 (276)
T PHA02857 75 DFGVYVRDVVQHVVTIKSTY--PGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFY 152 (276)
T ss_pred CHHHHHHHHHHHHHHHHhhC--CCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhC
Confidence 11123567777777765542 2468999999999999999999999999999999997652110 00
Q ss_pred CCCC-C-CCh----h---hhhcc-CCCC------CHHHHHHHHhc--CcccccCCCCCCeEEEeccCCCCCCCChHHHHH
Q 004368 638 DPTI-P-LTT----A---EWEEW-GDPW------KEEFYFYMKSY--SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKF 699 (758)
Q Consensus 638 ~~~~-~-~~~----~---~~~e~-g~p~------~~~~~~~l~~~--sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~ 699 (758)
.... . +.. . +...+ .+|. .......+... .....+.++++| +|++||++|..||+..+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vliv~G~~D~i~~~~~~~~l 231 (276)
T PHA02857 153 PNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTP-ILILQGTNNEISDVSGAYYF 231 (276)
T ss_pred CCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCC-EEEEecCCCCcCChHHHHHH
Confidence 0000 0 000 0 00000 1110 00000111111 112456677898 99999999999999999999
Q ss_pred HHHHHhcCCCCceEEEEecCCCCCCCCCChHH-HHHHHHHHHHHHHHhc
Q 004368 700 VAKLREMKTDDNILLFKCELGAGHFSKSGRFE-RLREAAFTYTFLMRAL 747 (758)
Q Consensus 700 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~-~~~~~~~~~~fl~~~l 747 (758)
++++.. ..++++++ ++||........ .-+-..++++||.++.
T Consensus 232 ~~~~~~---~~~~~~~~---~~gH~~~~e~~~~~~~~~~~~~~~l~~~~ 274 (276)
T PHA02857 232 MQHANC---NREIKIYE---GAKHHLHKETDEVKKSVMKEIETWIFNRV 274 (276)
T ss_pred HHHccC---CceEEEeC---CCcccccCCchhHHHHHHHHHHHHHHHhc
Confidence 887643 34567776 999987644333 2333556789998763
No 37
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=3.7e-14 Score=157.44 Aligned_cols=203 Identities=15% Similarity=0.129 Sum_probs=145.6
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..+.|||||++|||+....+ ..+|+++|+++|+.... ..++....+.||||| +++|+....+ ..+||++++.+
T Consensus 206 v~~p~wSpDg~~la~~s~~~~--~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g--~~~Iy~~d~~~ 281 (433)
T PRK04922 206 ILSPAWSPDGKKLAYVSFERG--RSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDG--NPEIYVMDLGS 281 (433)
T ss_pred cccccCCCCCCEEEEEecCCC--CcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCC--CceEEEEECCC
Confidence 567899999999999987665 47899999999987655 334445568999999 7888765432 35799999987
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccc-cceeeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVDTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~~~~s~dg~~l~~~s~~ 349 (758)
+. ...+... ......+.|||||++|++.++..+..+||++|+++++ .+.++... ......|||||++|++.+..
T Consensus 282 g~--~~~lt~~--~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~-~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~ 356 (433)
T PRK04922 282 RQ--LTRLTNH--FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS-AERLTFQGNYNARASVSPDGKKIAMVHGS 356 (433)
T ss_pred CC--eEECccC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEeecCCCCccCEEECCCCCEEEEEECC
Confidence 63 2333221 1223357899999999999877777899999998876 66665322 22245699999999998765
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+ ..++|+.+++++ +....+.....+ .-..++++++.+++.....+...|++++++
T Consensus 357 ~--~~~~I~v~d~~~-g~~~~Lt~~~~~-~~p~~spdG~~i~~~s~~~g~~~L~~~~~~ 411 (433)
T PRK04922 357 G--GQYRIAVMDLST-GSVRTLTPGSLD-ESPSFAPNGSMVLYATREGGRGVLAAVSTD 411 (433)
T ss_pred C--CceeEEEEECCC-CCeEECCCCCCC-CCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 3 357899999876 333334433222 223566777888888877788888888776
No 38
>PRK10749 lysophospholipase L2; Provisional
Probab=99.68 E-value=3.1e-15 Score=160.01 Aligned_cols=246 Identities=17% Similarity=0.176 Sum_probs=145.6
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhc
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 566 (758)
+...+...||.++......+. .+.|+||++||..+. ...|...+..|+++||.|+.+|+||+|.++......
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~------~~~~~vll~HG~~~~--~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~ 102 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP------HHDRVVVICPGRIES--YVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDP 102 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC------CCCcEEEEECCccch--HHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCC
Confidence 445666778988777644332 235789999995322 122445556788999999999999999875422110
Q ss_pred ccc--cCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc--------
Q 004368 567 GKF--LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM-------- 636 (758)
Q Consensus 567 ~~~--~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~-------- 636 (758)
... ..-..-++|+.+.++.+... .+..++.++|+|+||.++..++.++|+.++++|+.+|........
T Consensus 103 ~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~ 180 (330)
T PRK10749 103 HRGHVERFNDYVDDLAAFWQQEIQP--GPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRI 180 (330)
T ss_pred CcCccccHHHHHHHHHHHHHHHHhc--CCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHH
Confidence 000 00112234455555554433 234789999999999999999999999999999999865321000
Q ss_pred ---C--CC----C----------CCCC-------hhhh----hcc-CCCCC-------HHHHHHHHh-cCcccccCCCCC
Q 004368 637 ---L--DP----T----------IPLT-------TAEW----EEW-GDPWK-------EEFYFYMKS-YSPVDNVKAQNY 677 (758)
Q Consensus 637 ---~--~~----~----------~~~~-------~~~~----~e~-g~p~~-------~~~~~~l~~-~sp~~~i~~~~~ 677 (758)
. .. . .+.. ...+ ..+ .+|.. ......+.. .....++.+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (330)
T PRK10749 181 LNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITT 260 (330)
T ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCC
Confidence 0 00 0 0000 0000 000 01100 000000100 011244566788
Q ss_pred CeEEEeccCCCCCCCChHHHHHHHHHHhcCC---CCceEEEEecCCCCCCCCCChH-HHHHHHHHHHHHHHHh
Q 004368 678 PHILVTAGLNDPRVMYSEPAKFVAKLREMKT---DDNILLFKCELGAGHFSKSGRF-ERLREAAFTYTFLMRA 746 (758)
Q Consensus 678 P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~---~~~~~~~~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~ 746 (758)
| +||+||++|..|++..+.+++++++.++. +.++++|+ ++||....... ..-.-..++.+||.++
T Consensus 261 P-~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~---gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 261 P-LLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIK---GAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred C-EEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeC---CCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 8 99999999999999999999999987653 34577776 99997543221 1222234467888764
No 39
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.66 E-value=2.5e-15 Score=171.46 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=107.7
Q ss_pred eeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCC--CCC-ChHHHHHHHcCcEEEEEecCCCCCCchhHHhcc
Q 004368 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND--PAF-NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 567 (758)
Q Consensus 491 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~--~~~-~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~ 567 (758)
+++.||++|.+.++.|++. ++.|+||++|| ++.... ..+ ......|+++||+|+++|+||.|+++..+...
T Consensus 1 i~~~DG~~L~~~~~~P~~~----~~~P~Il~~~g-yg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~- 74 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAGG----GPVPVILSRTP-YGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLL- 74 (550)
T ss_pred CcCCCCCEEEEEEEecCCC----CCCCEEEEecC-CCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEec-
Confidence 3578999999998888653 47899999997 333221 111 22346889999999999999999887654321
Q ss_pred cccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhc
Q 004368 568 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT 635 (758)
Q Consensus 568 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~ 635 (758)
.....+|+.++++|+.++.+.+ .+|+++|+|+||++++.++..+|+.++|+|+.+++.|+...
T Consensus 75 ----~~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 75 ----GSDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRD 137 (550)
T ss_pred ----CcccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHh
Confidence 1457799999999999998876 79999999999999999999999999999999999887654
No 40
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.66 E-value=2.6e-16 Score=163.45 Aligned_cols=215 Identities=20% Similarity=0.276 Sum_probs=140.9
Q ss_pred CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCC-----CCCh----HHHHHHHcCcEEEEEecCCCCCCchhHHh
Q 004368 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-----AFNS----SRLSLLDRGFIFAIAQIRGGGELGRQWYE 565 (758)
Q Consensus 495 dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~-----~~~~----~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 565 (758)
||++|.+.++.| +. ..+++.|+||..++ |+..... .... ....|+++||+|++.|.||.|+++..|..
T Consensus 1 DGv~L~adv~~P-~~-~~~~~~P~il~~tp-Y~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~ 77 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-DGGGPFPVILTRTP-YGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDP 77 (272)
T ss_dssp TS-EEEEEEEEE----TTSSSEEEEEEEES-STCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-T
T ss_pred CCCEEEEEEEec-CC-CCCCcccEEEEccC-cCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCcccc
Confidence 899999999999 43 45688999999877 4422100 0111 11239999999999999999998877654
Q ss_pred cccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCC-CCC-CC
Q 004368 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD-PTI-PL 643 (758)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~-~~~-~~ 643 (758)
. ..++.+|..++|+|+.++.+.| .|||++|.||+|+.+.+++.+.|...+|++..++..|+...... ... ..
T Consensus 78 ~-----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~ 151 (272)
T PF02129_consen 78 M-----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRL 151 (272)
T ss_dssp T-----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBC
T ss_pred C-----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccc
Confidence 2 5677899999999999998875 79999999999999999999888899999999999887651110 000 00
Q ss_pred C-hhhh-------hccCC-C-CC----------------------------------HHHHHHHHhcCcccccCCCCCCe
Q 004368 644 T-TAEW-------EEWGD-P-WK----------------------------------EEFYFYMKSYSPVDNVKAQNYPH 679 (758)
Q Consensus 644 ~-~~~~-------~e~g~-p-~~----------------------------------~~~~~~l~~~sp~~~i~~~~~P~ 679 (758)
. ...| ..... + .. +..-+++.+.++..++.++++|
T Consensus 152 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP- 230 (272)
T PF02129_consen 152 GFFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVP- 230 (272)
T ss_dssp CHHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SE-
T ss_pred cchhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCC-
Confidence 0 0011 00000 0 00 0011223444555556788898
Q ss_pred EEEeccCCCCCCCChHHHHHHHHHHhcC-CCCceEEEEecCCCCCC
Q 004368 680 ILVTAGLNDPRVMYSEPAKFVAKLREMK-TDDNILLFKCELGAGHF 724 (758)
Q Consensus 680 ~Li~~G~~D~~V~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~gH~ 724 (758)
+|+++|..|..+. .++.+.+++|++.+ .+.++++- ..+|+
T Consensus 231 ~l~v~Gw~D~~~~-~~~~~~~~~l~~~~~~~~~Liig----pw~H~ 271 (272)
T PF02129_consen 231 VLIVGGWYDTLFL-RGALRAYEALRAPGSKPQRLIIG----PWTHG 271 (272)
T ss_dssp EEEEEETTCSSTS-HHHHHHHHHHCTTSTC-EEEEEE----SESTT
T ss_pred EEEecccCCcccc-hHHHHHHHHhhcCCCCCCEEEEe----CCCCC
Confidence 9999999997777 89999999999988 55566554 36664
No 41
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.66 E-value=4.3e-15 Score=146.96 Aligned_cols=247 Identities=15% Similarity=0.120 Sum_probs=160.7
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHh
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 565 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 565 (758)
.....++..+|.++..-...|... .++..+|+++|| |+......|...+..|+..||.|+.+|++|+|.+..-
T Consensus 27 ~~~~~~~n~rG~~lft~~W~p~~~---~~pr~lv~~~HG-~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl--- 99 (313)
T KOG1455|consen 27 YSESFFTNPRGAKLFTQSWLPLSG---TEPRGLVFLCHG-YGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL--- 99 (313)
T ss_pred eeeeeEEcCCCCEeEEEecccCCC---CCCceEEEEEcC-CcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC---
Confidence 345567788998877665555432 256779999999 5666666788888899999999999999999965320
Q ss_pred cccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc---------
Q 004368 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--------- 636 (758)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~--------- 636 (758)
.+.-..-...++|+.+-.+....+.--.-...+++|+||||.+++.++.+.|+.+.++|+.+|+.-+..-+
T Consensus 100 ~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~ 179 (313)
T KOG1455|consen 100 HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISI 179 (313)
T ss_pred cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHH
Confidence 00001112334555555555445443344689999999999999999999999999999999975432211
Q ss_pred ---CCCCCCCCh-hhhhccCCC--CCHHHHHHHHhcCc----------------------ccccCCCCCCeEEEeccCCC
Q 004368 637 ---LDPTIPLTT-AEWEEWGDP--WKEEFYFYMKSYSP----------------------VDNVKAQNYPHILVTAGLND 688 (758)
Q Consensus 637 ---~~~~~~~~~-~~~~e~g~p--~~~~~~~~l~~~sp----------------------~~~i~~~~~P~~Li~~G~~D 688 (758)
+..-+|... ..-.....+ .+++..+.+ ..+| ..|+.++..| +||+||+.|
T Consensus 180 l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~-~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvP-flilHG~dD 257 (313)
T KOG1455|consen 180 LTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKIL-RSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVP-FLILHGTDD 257 (313)
T ss_pred HHHHHHhCCceeecCCccccccccCCHHHHHHh-hcCCceecCCccHHHHHHHHHHHHHHHHhccccccc-EEEEecCCC
Confidence 000011000 000000111 233332222 2334 3677788998 999999999
Q ss_pred CCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHHh
Q 004368 689 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 689 ~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~ 746 (758)
.++.+.-++++++....+ +.++.+|+ +.-|.... .......-..++.+||.++
T Consensus 258 ~VTDp~~Sk~Lye~A~S~--DKTlKlYp---Gm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 258 KVTDPKVSKELYEKASSS--DKTLKLYP---GMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred cccCcHHHHHHHHhccCC--CCceeccc---cHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 999999999999976544 34566676 88887542 3344444467889999875
No 42
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.65 E-value=3.3e-15 Score=158.68 Aligned_cols=228 Identities=20% Similarity=0.191 Sum_probs=153.9
Q ss_pred CCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCC-hHHH-HHHHcCcEEEEEecCCCCCCchhHHhccccc
Q 004368 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN-SSRL-SLLDRGFIFAIAQIRGGGELGRQWYENGKFL 570 (758)
Q Consensus 493 s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~~-~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~ 570 (758)
..++..+++.++.| .. ...++.|+|||+|||.......... .... .+...|+.|+.+|||-..+.
T Consensus 58 ~~~~~~~~~~~y~p-~~-~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 58 GPSGDGVPVRVYRP-DR-KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred CCCCCceeEEEECC-CC-CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 34555688888888 32 3346789999999987665544433 3343 45557999999999988764
Q ss_pred CCcChHhHHHHHHHHHHHcC---CCCCCcEEEEEeChhHHHHHHHHhhCCC----ceeEEEEcCCccchhhccCCCCC--
Q 004368 571 KKKNTFTDFIACAEYLIKNC---YCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTMLDPTI-- 641 (758)
Q Consensus 571 ~~~~~~~D~~~~~~~l~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~~~~d~~~~~~~~~~-- 641 (758)
.-+..++|+.+++.|+.++. .+|+++|+++|+|+||.|++.++....+ ..++.++.+|.+|... . ..+.
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~~ 202 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLPG 202 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchhh
Confidence 22466799999999998874 5899999999999999999888776433 5689999999999764 1 1111
Q ss_pred -----CCChhhhh-----cc-CCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCC
Q 004368 642 -----PLTTAEWE-----EW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDD 710 (758)
Q Consensus 642 -----~~~~~~~~-----e~-g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~ 710 (758)
.+...... .| +...+... ...+|+..-.-...||++|++|+.|...+ +++.|+++|+++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~spl~~~~~~~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~ 276 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDRED----PEASPLASDDLSGLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPV 276 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCC----CccCccccccccCCCCEEEEecCCCcchh--HHHHHHHHHHHcCCeE
Confidence 11111100 11 11111100 12455543321137889999999999888 9999999999999999
Q ss_pred ceEEEEecCCCCCCCCCCh-HHHHHHHHHHHHHHH
Q 004368 711 NILLFKCELGAGHFSKSGR-FERLREAAFTYTFLM 744 (758)
Q Consensus 711 ~~~~~~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~ 744 (758)
++..++ +..|.+.... ....+....+..|+.
T Consensus 277 ~~~~~~---g~~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 277 ELRVYP---GMIHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred EEEEeC---CcceeccccCcHHHHHHHHHHHHHHH
Confidence 887776 8889763221 233333344555655
No 43
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=8e-14 Score=154.08 Aligned_cols=242 Identities=12% Similarity=0.088 Sum_probs=163.1
Q ss_pred CEEEEEEeCCC-CeEEEEEEEECCCCceeecccc-CcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEe
Q 004368 203 KLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLY 279 (758)
Q Consensus 203 ~~lAy~~~~~G-~e~~~l~v~dl~~g~~~~~~~~-~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~ 279 (758)
++|||+....+ ...++|+++|.+++.....+.. .....++||||| +|+|++.... ..++|++++.++. ...+.
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~--~~~l~ 239 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGA--VRQVA 239 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCC--eEEcc
Confidence 88999987543 3367999999998876655332 235679999999 8999875432 3469999997763 23333
Q ss_pred eecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEcCCCCCCcEEE
Q 004368 280 HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELL 358 (758)
Q Consensus 280 ~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~~L~ 358 (758)
.... ....+.|||||++|++.....+..+||++|+++++ .+.++..... ....|+|||++|+|.+++++ ..+||
T Consensus 240 ~~~~--~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~-~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g--~~~Iy 314 (429)
T PRK03629 240 SFPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAYTSDQAG--RPQVY 314 (429)
T ss_pred CCCC--CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCC-EEEccCCCCCcCceEECCCCCEEEEEeCCCC--CceEE
Confidence 2211 22357899999999998766666789999999886 7777654322 34569999999999998753 46899
Q ss_pred EEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcc
Q 004368 359 ACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESV 438 (758)
Q Consensus 359 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~ 438 (758)
.+++++. ....+...........++++++.+++....++...+++++++ ++..+. +. .. +....+.++
T Consensus 315 ~~d~~~g-~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~--~g~~~~------Lt--~~-~~~~~p~~S 382 (429)
T PRK03629 315 KVNINGG-APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA--TGGVQV------LT--DT-FLDETPSIA 382 (429)
T ss_pred EEECCCC-CeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECC--CCCeEE------eC--CC-CCCCCceEC
Confidence 9998763 333444333222334567778899888877777788888876 332222 22 11 112345678
Q ss_pred cCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 439 FSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 439 ~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
+|+..+.|.... .....++.+++.++.
T Consensus 383 pDG~~i~~~s~~-~~~~~l~~~~~~G~~ 409 (429)
T PRK03629 383 PNGTMVIYSSSQ-GMGSVLNLVSTDGRF 409 (429)
T ss_pred CCCCEEEEEEcC-CCceEEEEEECCCCC
Confidence 899888765543 223457788876554
No 44
>PRK11460 putative hydrolase; Provisional
Probab=99.63 E-value=1.1e-14 Score=147.02 Aligned_cols=185 Identities=17% Similarity=0.177 Sum_probs=127.2
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCC----CCchhHHhcccccCCcCh-------HhHHHHH
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG----ELGRQWYENGKFLKKKNT-------FTDFIAC 582 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g----~~G~~~~~~~~~~~~~~~-------~~D~~~~ 582 (758)
.+.|+||++||..+. ...|......|...++.+.++.+||.. ..|..|+... .....+. ...+.+.
T Consensus 14 ~~~~~vIlLHG~G~~--~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDN--PVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCC--hHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHHHH
Confidence 457999999994333 233556666777777666666666632 2356776431 1111121 2334456
Q ss_pred HHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHH
Q 004368 583 AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFY 662 (758)
Q Consensus 583 ~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~ 662 (758)
++++.++..+++++|+++|+|+||.+++.++.++|++++++++.++.+. .. +.
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------~~------------~~------- 143 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------SL------------PE------- 143 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------cc------------cc-------
Confidence 6777777778899999999999999999999889998888887666321 00 00
Q ss_pred HHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 004368 663 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTF 742 (758)
Q Consensus 663 l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 742 (758)
.+ ..+.| +|++||.+|+.||++.+++++++|++.+.+++.+.|+ +.||.+.. + +..+..+|
T Consensus 144 ----~~-----~~~~p-vli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~---~~gH~i~~---~---~~~~~~~~ 204 (232)
T PRK11460 144 ----TA-----PTATT-IHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVE---DLGHAIDP---R---LMQFALDR 204 (232)
T ss_pred ----cc-----cCCCc-EEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEEC---CCCCCCCH---H---HHHHHHHH
Confidence 00 11355 9999999999999999999999999999877777775 99998742 2 23334567
Q ss_pred HHHhc
Q 004368 743 LMRAL 747 (758)
Q Consensus 743 l~~~l 747 (758)
|.+.|
T Consensus 205 l~~~l 209 (232)
T PRK11460 205 LRYTV 209 (232)
T ss_pred HHHHc
Confidence 76665
No 45
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=1.7e-13 Score=151.55 Aligned_cols=240 Identities=15% Similarity=0.143 Sum_probs=161.9
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEee
Q 004368 203 KLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (758)
Q Consensus 203 ~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~ 280 (758)
.+|||....++ .++|+++|.++....+.+ .......++||||| +|+|++... ...+||++++.++. ...+..
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~--~~~~I~~~dl~~g~--~~~l~~ 237 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFES--KKPVVYVHDLATGR--RRVVAN 237 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccC--CCcEEEEEECCCCC--EEEeec
Confidence 67999986544 578999999776655542 23345669999999 899987643 23469999998773 233322
Q ss_pred ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCcEEEE
Q 004368 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLA 359 (758)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~~L~~ 359 (758)
.. .....+.|||||+.|++..+..+..+||.+|++++. .+.++.... .....|+|||++|+|.+++.+ ..+||.
T Consensus 238 ~~--g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g--~~~Iy~ 312 (427)
T PRK02889 238 FK--GSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGG--APQIYR 312 (427)
T ss_pred CC--CCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCC--CcEEEE
Confidence 11 223367899999999998877777899999998776 777765432 234569999999999988753 468999
Q ss_pred EeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCccc
Q 004368 360 CPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVF 439 (758)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~ 439 (758)
+++++. ..+.++.......-..++++++++++....++...+++++++. +..+. +. ... ....+.+++
T Consensus 313 ~~~~~g-~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~--g~~~~------lt--~~~-~~~~p~~sp 380 (427)
T PRK02889 313 MPASGG-AAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLAT--GQVTA------LT--DTT-RDESPSFAP 380 (427)
T ss_pred EECCCC-ceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCC--CCeEE------cc--CCC-CccCceECC
Confidence 998652 3333443322222346777888998887777777888998873 32222 21 111 123467888
Q ss_pred CCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 440 SSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 440 d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
|+..++|....-. -..+|.++..++.
T Consensus 381 dg~~l~~~~~~~g-~~~l~~~~~~g~~ 406 (427)
T PRK02889 381 NGRYILYATQQGG-RSVLAAVSSDGRI 406 (427)
T ss_pred CCCEEEEEEecCC-CEEEEEEECCCCc
Confidence 9999888765433 3568888875443
No 46
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=1.6e-13 Score=152.27 Aligned_cols=243 Identities=12% Similarity=0.133 Sum_probs=163.4
Q ss_pred CCEEEEEEeCC--CCeEEEEEEEECCCCceeeccc-cCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEE
Q 004368 202 NKLVAYAEDTK--GDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (758)
Q Consensus 202 G~~lAy~~~~~--G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~ 277 (758)
+++|||+.... +...++|+++|.+++....++. ......++||||| .|+|++... ...+||++++.++. ...
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~--~~~~l~~~dl~~g~--~~~ 242 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER--GRSAIYVQDLATGQ--REL 242 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC--CCcEEEEEECCCCC--EEE
Confidence 56788986543 2346899999998877665532 3335668999999 899987643 24579999997763 333
Q ss_pred EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCcE
Q 004368 278 LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSE 356 (758)
Q Consensus 278 v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~~ 356 (758)
+... +.....+.|||||++|++.....+..+||++|+++++ .+.++.... .....|+|||++|+|.+++.+ ..+
T Consensus 243 l~~~--~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g--~~~ 317 (433)
T PRK04922 243 VASF--RGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGG--RPQ 317 (433)
T ss_pred eccC--CCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC-eEECccCCCCccceEECCCCCEEEEEECCCC--Cce
Confidence 3222 1223357899999999988776667899999999887 677765432 234569999999999998763 468
Q ss_pred EEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCC
Q 004368 357 LLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE 436 (758)
Q Consensus 357 L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~ 436 (758)
||.+++++. ..+.++.......-..++++++.+++....++...++++++. ++..+.++.. . ....+.
T Consensus 318 iy~~dl~~g-~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~--~g~~~~Lt~~--------~-~~~~p~ 385 (433)
T PRK04922 318 IYRVAASGG-SAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLS--TGSVRTLTPG--------S-LDESPS 385 (433)
T ss_pred EEEEECCCC-CeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECC--CCCeEECCCC--------C-CCCCce
Confidence 999998763 333444333222234677788888887766666788899886 3322222211 1 123456
Q ss_pred cccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 437 SVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 437 ~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
+++|++.+.|.... ..-..+|.+++.++.
T Consensus 386 ~spdG~~i~~~s~~-~g~~~L~~~~~~g~~ 414 (433)
T PRK04922 386 FAPNGSMVLYATRE-GGRGVLAAVSTDGRV 414 (433)
T ss_pred ECCCCCEEEEEEec-CCceEEEEEECCCCc
Confidence 78899888776654 233579999886654
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.62 E-value=4.1e-15 Score=139.81 Aligned_cols=207 Identities=19% Similarity=0.180 Sum_probs=142.9
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
+-.||++||-.|+.. ........|.++||.|.+|++||+|-.+.++..-+...| ++|+.++.++|.++|+ +
T Consensus 15 ~~AVLllHGFTGt~~--Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~ 85 (243)
T COG1647 15 NRAVLLLHGFTGTPR--DVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---D 85 (243)
T ss_pred CEEEEEEeccCCCcH--HHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---C
Confidence 378999999444332 244555688889999999999999988877766555544 5899999999999998 7
Q ss_pred cEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCC-----hhhhhccCCCCCHHHHHHHHhcC--c
Q 004368 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLT-----TAEWEEWGDPWKEEFYFYMKSYS--P 668 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~-----~~~~~e~g~p~~~~~~~~l~~~s--p 668 (758)
.|++.|.|+||.+++.++.++| .+++|..++.+.+... ...+. ..++..+-....+..-+.+.++. |
T Consensus 86 eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~----~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~ 159 (243)
T COG1647 86 EIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSW----RIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTP 159 (243)
T ss_pred eEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccc----hhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcch
Confidence 9999999999999999999998 4555554443332110 11110 01222333332233333344444 2
Q ss_pred --------------ccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHH
Q 004368 669 --------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLR 734 (758)
Q Consensus 669 --------------~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 734 (758)
..++..+..| +||+.|.+|+.||...+..++..+... +.++.+|+ +.||....+... -.
T Consensus 160 ~~~~~~~~~~i~~~~~~~~~I~~p-t~vvq~~~D~mv~~~sA~~Iy~~v~s~--~KeL~~~e---~SgHVIt~D~Er-d~ 232 (243)
T COG1647 160 MTTTAQLKKLIKDARRSLDKIYSP-TLVVQGRQDEMVPAESANFIYDHVESD--DKELKWLE---GSGHVITLDKER-DQ 232 (243)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccc-hhheecccCCCCCHHHHHHHHHhccCC--cceeEEEc---cCCceeecchhH-HH
Confidence 3566677888 999999999999999999999988654 35677887 999987644322 22
Q ss_pred HHHHHHHHHH
Q 004368 735 EAAFTYTFLM 744 (758)
Q Consensus 735 ~~~~~~~fl~ 744 (758)
-..+++.||.
T Consensus 233 v~e~V~~FL~ 242 (243)
T COG1647 233 VEEDVITFLE 242 (243)
T ss_pred HHHHHHHHhh
Confidence 2234788885
No 48
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.62 E-value=4e-13 Score=149.18 Aligned_cols=243 Identities=11% Similarity=0.087 Sum_probs=162.1
Q ss_pred CCEEEEEEeCCCC-eEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEE
Q 004368 202 NKLVAYAEDTKGD-EIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICL 278 (758)
Q Consensus 202 G~~lAy~~~~~G~-e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v 278 (758)
..+|||.....+. ..++|+++|.++.....++ .......+.||||| +|+|++... ...+||++++.++. ...+
T Consensus 182 ~~riayv~~~~~~~~~~~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~--g~~~L~~~dl~tg~--~~~l 257 (448)
T PRK04792 182 LTRIAYVVVNDKDKYPYQLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFEN--RKAEIFVQDIYTQV--REKV 257 (448)
T ss_pred cCEEEEEEeeCCCCCceEEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecC--CCcEEEEEECCCCC--eEEe
Confidence 3678888765543 3579999999887665442 23335569999999 899987653 23579999998763 3333
Q ss_pred eeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCcEE
Q 004368 279 YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSEL 357 (758)
Q Consensus 279 ~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~~L 357 (758)
.... .....+.|||||++|++.....+..+||++|+++++ .+.++.... .....|+|||++|+|.++.++ +.+|
T Consensus 258 t~~~--g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~-~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g--~~~I 332 (448)
T PRK04792 258 TSFP--GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA-LTRITRHRAIDTEPSWHPDGKSLIFTSERGG--KPQI 332 (448)
T ss_pred cCCC--CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC-eEECccCCCCccceEECCCCCEEEEEECCCC--CceE
Confidence 3222 122357899999999998777777899999999887 777765432 234569999999999988753 4689
Q ss_pred EEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCc
Q 004368 358 LACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 437 (758)
Q Consensus 358 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~ 437 (758)
|.+++++. ....++.......-..++++++.+++....++..++++++++ ++....++.. . .....++
T Consensus 333 y~~dl~~g-~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~--~g~~~~lt~~--------~-~d~~ps~ 400 (448)
T PRK04792 333 YRVNLASG-KVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLE--TGAMQVLTST--------R-LDESPSV 400 (448)
T ss_pred EEEECCCC-CEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECC--CCCeEEccCC--------C-CCCCceE
Confidence 99998763 333444322222224677788899888777777778878776 3322222211 1 1123467
Q ss_pred ccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 438 VFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 438 ~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
+++++.++|+...- .-..+|.++..++.
T Consensus 401 spdG~~I~~~~~~~-g~~~l~~~~~~G~~ 428 (448)
T PRK04792 401 APNGTMVIYSTTYQ-GKQVLAAVSIDGRF 428 (448)
T ss_pred CCCCCEEEEEEecC-CceEEEEEECCCCc
Confidence 88898887766432 33468888875544
No 49
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=4.1e-13 Score=148.75 Aligned_cols=199 Identities=13% Similarity=0.080 Sum_probs=134.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..+.|||||++|||+...++ ..+|+++|+.+|+.... ...+....++||||| +|+|+...++ ..+||..++.+
T Consensus 206 v~~p~wSPDG~~la~~s~~~~--~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g--~~~Iy~~d~~~ 281 (429)
T PRK01742 206 LMSPAWSPDGSKLAYVSFENK--KSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDG--VLNIYVMGANG 281 (429)
T ss_pred cccceEcCCCCEEEEEEecCC--CcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCC--cEEEEEEECCC
Confidence 567899999999999987544 57899999999876544 344444568999999 7888764332 34689888876
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEcCC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 350 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 350 (758)
+. ...+.. . ......+.|||||++|++.++..+..+||.++..++. .+.+... +....|+|||++|++.+.
T Consensus 282 ~~--~~~lt~-~-~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~-~~~l~~~--~~~~~~SpDG~~ia~~~~-- 352 (429)
T PRK01742 282 GT--PSQLTS-G-AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGG-ASLVGGR--GYSAQISADGKTLVMING-- 352 (429)
T ss_pred CC--eEeecc-C-CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-eEEecCC--CCCccCCCCCCEEEEEcC--
Confidence 53 233322 2 2223468899999999998877777899999997765 4444322 223349999999988754
Q ss_pred CCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 351 ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 351 ~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
..++.+|+.+. ....+.... ...-..++++++.+++...+++...+++++.+ |.
T Consensus 353 ----~~i~~~Dl~~g-~~~~lt~~~-~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~--G~ 406 (429)
T PRK01742 353 ----DNVVKQDLTSG-STEVLSSTF-LDESPSISPNGIMIIYSSTQGLGKVLQLVSAD--GR 406 (429)
T ss_pred ----CCEEEEECCCC-CeEEecCCC-CCCCceECCCCCEEEEEEcCCCceEEEEEECC--CC
Confidence 24777888653 323333222 21223566777788877766666566666655 55
No 50
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=4.4e-13 Score=149.16 Aligned_cols=244 Identities=10% Similarity=0.121 Sum_probs=162.8
Q ss_pred CCCEEEEEEeCC--CCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcE
Q 004368 201 DNKLVAYAEDTK--GDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 276 (758)
Q Consensus 201 DG~~lAy~~~~~--G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~ 276 (758)
..++|||..... +++.++|+++|.+++...... .......+.||||| +|+|++... ...+||++++.++. ..
T Consensus 161 f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~--~~~~l~~~~l~~g~--~~ 236 (430)
T PRK00178 161 FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ--KRPRIFVQNLDTGR--RE 236 (430)
T ss_pred ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC--CCCEEEEEECCCCC--EE
Confidence 566799986543 345789999999988765542 22334668999999 899987653 23479999998773 23
Q ss_pred EEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCc
Q 004368 277 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNS 355 (758)
Q Consensus 277 ~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~ 355 (758)
.+.... .....+.|||||++|++.....+..+||++|++++. .+.++.... .....|+|||++++|.+++++ ..
T Consensus 237 ~l~~~~--g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g--~~ 311 (430)
T PRK00178 237 QITNFE--GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQ-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGG--KP 311 (430)
T ss_pred EccCCC--CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCC-eEEcccCCCCcCCeEECCCCCEEEEEECCCC--Cc
Confidence 333222 122357899999999998877677899999999886 777765432 234569999999999988763 46
Q ss_pred EEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCC
Q 004368 356 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 435 (758)
Q Consensus 356 ~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~ 435 (758)
+||.+++++. ..+.++..........++++++.+++....++...|+++++.. +..+.+ . ..... ...
T Consensus 312 ~iy~~d~~~g-~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~t--g~~~~l------t--~~~~~-~~p 379 (430)
T PRK00178 312 QIYKVNVNGG-RAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQR--GSVRIL------T--DTSLD-ESP 379 (430)
T ss_pred eEEEEECCCC-CEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCC--CCEEEc------c--CCCCC-CCc
Confidence 8999998763 3333443322223346777888998888777766788888773 322222 2 11111 234
Q ss_pred CcccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 436 ESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 436 ~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
.+++++..+.|+...- .-..+|.++..++.
T Consensus 380 ~~spdg~~i~~~~~~~-g~~~l~~~~~~g~~ 409 (430)
T PRK00178 380 SVAPNGTMLIYATRQQ-GRGVLMLVSINGRV 409 (430)
T ss_pred eECCCCCEEEEEEecC-CceEEEEEECCCCc
Confidence 6788898887765432 22458888876544
No 51
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.59 E-value=1.1e-13 Score=150.09 Aligned_cols=244 Identities=15% Similarity=0.077 Sum_probs=150.7
Q ss_pred eeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHH
Q 004368 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (758)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 564 (758)
......+...+|..++.....|... .+.|+||++||..+.. ..|...+..|+++||.|+.+|+||+|.....+.
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~~----~~~~~Vl~lHG~~~~~--~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~ 182 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAAG----EMRGILIIIHGLNEHS--GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG 182 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCCC----CCceEEEEECCchHHH--HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC
Confidence 3455566777888888877666432 3468999999964432 225556678888999999999999987643211
Q ss_pred hcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCC---ceeEEEEcCCccchhhcc-----
Q 004368 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTTM----- 636 (758)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~~~~d~~~~~----- 636 (758)
.........+|+.++++++..+. +..++.++|+|+||.++..++. +|+ .++++|+.+|.+++....
T Consensus 183 ---~~~~~~~~~~Dl~~~l~~l~~~~--~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~ 256 (395)
T PLN02652 183 ---YVPSLDYVVEDTEAFLEKIRSEN--PGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGA 256 (395)
T ss_pred ---CCcCHHHHHHHHHHHHHHHHHhC--CCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHH
Confidence 00111123467888888887542 2347999999999999987665 564 789999999986533110
Q ss_pred -------CCCCC----------CCChh--h-hhccCCCC-------CHHHHHHHHhcC-cccccCCCCCCeEEEeccCCC
Q 004368 637 -------LDPTI----------PLTTA--E-WEEWGDPW-------KEEFYFYMKSYS-PVDNVKAQNYPHILVTAGLND 688 (758)
Q Consensus 637 -------~~~~~----------~~~~~--~-~~e~g~p~-------~~~~~~~l~~~s-p~~~i~~~~~P~~Li~~G~~D 688 (758)
..+.. +.... . ...+.+|. ....+..++... ...++.++++| +||+||.+|
T Consensus 257 ~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vP-vLIi~G~~D 335 (395)
T PLN02652 257 VAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVP-FMVLHGTAD 335 (395)
T ss_pred HHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCC-EEEEEeCCC
Confidence 00000 00000 0 00111110 000011111100 12345667898 999999999
Q ss_pred CCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCC--ChHHHHHHHHHHHHHHHHhcCC
Q 004368 689 PRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS--GRFERLREAAFTYTFLMRALSM 749 (758)
Q Consensus 689 ~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~~fl~~~l~~ 749 (758)
..||+.++.++++++... ..++.+++ +++|.... .+.+.+ .++.+||..+++.
T Consensus 336 ~vvp~~~a~~l~~~~~~~--~k~l~~~~---ga~H~l~~e~~~e~v~---~~I~~FL~~~~~~ 390 (395)
T PLN02652 336 RVTDPLASQDLYNEAASR--HKDIKLYD---GFLHDLLFEPEREEVG---RDIIDWMEKRLDL 390 (395)
T ss_pred CCCCHHHHHHHHHhcCCC--CceEEEEC---CCeEEeccCCCHHHHH---HHHHHHHHHHhhc
Confidence 999999999999987543 34566665 88997532 233333 3367899998863
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.56 E-value=7.1e-14 Score=149.08 Aligned_cols=242 Identities=16% Similarity=0.158 Sum_probs=141.9
Q ss_pred EEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcc
Q 004368 488 RKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 567 (758)
Q Consensus 488 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~ 567 (758)
+..++..||..+.......+. ...+.|+||++||..+..........+..|.++||.|+++|+||+|+.......
T Consensus 33 ~~~~~~~dg~~~~l~w~~~~~---~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~-- 107 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSEDPA---QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR-- 107 (324)
T ss_pred eeEEECCCCCEEEEecCCCCc---cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc--
Confidence 344567788777654322111 124579999999965543332223345678889999999999998865422111
Q ss_pred cccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCc--eeEEEEcCCccchhhcc--CC-----
Q 004368 568 KFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLTTM--LD----- 638 (758)
Q Consensus 568 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~~~~d~~~~~--~~----- 638 (758)
.......+|+.++++++.++. ...++.++|+|+||.+++.++.++++. ++++|+.++..|+.... ++
T Consensus 108 --~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~ 183 (324)
T PRK10985 108 --IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSR 183 (324)
T ss_pred --eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHH
Confidence 111234689999999998763 246799999999999888777776543 67777666655532100 00
Q ss_pred ----------------------CCCCC---------Chhhhhcc-CCC--CCHHHHHHHHhcCcccccCCCCCCeEEEec
Q 004368 639 ----------------------PTIPL---------TTAEWEEW-GDP--WKEEFYFYMKSYSPVDNVKAQNYPHILVTA 684 (758)
Q Consensus 639 ----------------------~~~~~---------~~~~~~e~-g~p--~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~ 684 (758)
...+. +..+|.+. -.+ .-....+++...++...++++++| +|+++
T Consensus 184 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P-~lii~ 262 (324)
T PRK10985 184 VYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQIRKP-TLIIH 262 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhCCCCC-EEEEe
Confidence 00000 00111100 011 011123344455666677788898 99999
Q ss_pred cCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCC-----hHHHHHHHHHHHHHHHHhcC
Q 004368 685 GLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG-----RFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 685 G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~-----~~~~~~~~~~~~~fl~~~l~ 748 (758)
|++|+.+++.....+.+ .....++++++ ++||...-. ....+++. +.+||...++
T Consensus 263 g~~D~~~~~~~~~~~~~----~~~~~~~~~~~---~~GH~~~~~g~~~~~~~w~~~~--~~~~~~~~~~ 322 (324)
T PRK10985 263 AKDDPFMTHEVIPKPES----LPPNVEYQLTE---HGGHVGFVGGTLLKPQMWLEQR--IPDWLTTYLE 322 (324)
T ss_pred cCCCCCCChhhChHHHH----hCCCeEEEECC---CCCceeeCCCCCCCCCccHHHH--HHHHHHHhhc
Confidence 99999998765554422 22233444444 899965321 11233333 6788877654
No 53
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.55 E-value=4.4e-15 Score=148.40 Aligned_cols=187 Identities=20% Similarity=0.226 Sum_probs=123.3
Q ss_pred EEEecCCCccCCCCCCC-hHHHHHHH-cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHc---CCCC
Q 004368 519 LLYGYGSYEICNDPAFN-SSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYCT 593 (758)
Q Consensus 519 vl~~hGg~~~~~~~~~~-~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 593 (758)
||++|||.......... .....+++ +|++|+++|||-..+. .-+..++|+.++++|+.++ ...|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~-----------~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEA-----------PFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTS-----------STTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccc-----------cccccccccccceeeecccccccccc
Confidence 78999987665444333 34456775 8999999999976553 2346789999999999988 3478
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCC----ceeEEEEcCCccchhhcc---------CCCCCCCChhhh----hccCCCCC
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAAVPFVDVLTTM---------LDPTIPLTTAEW----EEWGDPWK 656 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~~~~d~~~~~---------~~~~~~~~~~~~----~e~g~p~~ 656 (758)
+++|+++|.|+||.|++.++.+..+ ..+++++.+|++|+.... ......+..... ..+-...+
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSD 149 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGG
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999888875332 489999999998871110 000011111100 11100000
Q ss_pred HHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 657 EEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 657 ~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
.+ -...||+..-.....||++|++|+.|..+ .++.+|+++|++.|+++++++++ +.+|.+
T Consensus 150 ~~----~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~---g~~H~f 209 (211)
T PF07859_consen 150 RD----DPLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYP---GMPHGF 209 (211)
T ss_dssp TT----STTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEET---TEETTG
T ss_pred cc----ccccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEEC---CCeEEe
Confidence 00 01356665511226899999999999765 59999999999999998888886 889964
No 54
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.55 E-value=7.7e-14 Score=129.74 Aligned_cols=234 Identities=18% Similarity=0.140 Sum_probs=160.5
Q ss_pred CceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHH-HHHHcCcEEEEEecCCCCCCch
Q 004368 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRGGGELGR 561 (758)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~~~RG~g~~G~ 561 (758)
++.-+++...+.|..++.++++... .+.|++++.||.-|... .+...+. .+.+.+..|++++|||-|..-.
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~E------~S~pTlLyfh~NAGNmG--hr~~i~~~fy~~l~mnv~ivsYRGYG~S~G 122 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLSE------SSRPTLLYFHANAGNMG--HRLPIARVFYVNLKMNVLIVSYRGYGKSEG 122 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeeccc------CCCceEEEEccCCCccc--chhhHHHHHHHHcCceEEEEEeeccccCCC
Confidence 4456889999999999999987622 36899999999554332 2333333 5567799999999998775433
Q ss_pred hHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCC
Q 004368 562 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTI 641 (758)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~ 641 (758)
.-.+.|. ..|-.++++||..+...|..+|.++|.|.||..+.++++...++..|+|+..-|+.+...+..--.
T Consensus 123 spsE~GL-------~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~ 195 (300)
T KOG4391|consen 123 SPSEEGL-------KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVF 195 (300)
T ss_pred Cccccce-------eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhheec
Confidence 3222222 368899999999999999999999999999999999999999999999999988776443221111
Q ss_pred CCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCC
Q 004368 642 PLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 721 (758)
Q Consensus 642 ~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 721 (758)
|+.......| .++ ..++.+..+.+-+.| .|++.|..|..|||-+-+++++.--... .++..|| ++
T Consensus 196 p~~~k~i~~l-------c~k--n~~~S~~ki~~~~~P-~LFiSGlkDelVPP~~Mr~Ly~~c~S~~--Krl~eFP---~g 260 (300)
T KOG4391|consen 196 PFPMKYIPLL-------CYK--NKWLSYRKIGQCRMP-FLFISGLKDELVPPVMMRQLYELCPSRT--KRLAEFP---DG 260 (300)
T ss_pred cchhhHHHHH-------HHH--hhhcchhhhccccCc-eEEeecCccccCCcHHHHHHHHhCchhh--hhheeCC---CC
Confidence 2111100100 111 123444455555788 9999999999999999999988754433 2345565 88
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004368 722 GHFSKSGRFERLREAAFTYTFLMRALSM 749 (758)
Q Consensus 722 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 749 (758)
.|.-..-....++. +.+||.+....
T Consensus 261 tHNDT~i~dGYfq~---i~dFlaE~~~~ 285 (300)
T KOG4391|consen 261 THNDTWICDGYFQA---IEDFLAEVVKS 285 (300)
T ss_pred ccCceEEeccHHHH---HHHHHHHhccC
Confidence 89543222222322 34688776553
No 55
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.54 E-value=6.7e-14 Score=147.20 Aligned_cols=239 Identities=19% Similarity=0.220 Sum_probs=139.9
Q ss_pred CceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchh
Q 004368 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ 562 (758)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~ 562 (758)
.+..+++.++-.+ ..|++++..|+. +++.|+||++-| ..+-....+......|+.+|++++.+|.+|.|+.. .
T Consensus 162 ~~~i~~v~iP~eg-~~I~g~LhlP~~----~~p~P~VIv~gG-lDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-~ 234 (411)
T PF06500_consen 162 DYPIEEVEIPFEG-KTIPGYLHLPSG----EKPYPTVIVCGG-LDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP-K 234 (411)
T ss_dssp SSEEEEEEEEETT-CEEEEEEEESSS----SS-EEEEEEE---TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-T
T ss_pred CCCcEEEEEeeCC-cEEEEEEEcCCC----CCCCCEEEEeCC-cchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-c
Confidence 5667888888654 789999887764 368899988744 33222221212223578899999999999998742 2
Q ss_pred HHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccc-hhhc-cCCCC
Q 004368 563 WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD-VLTT-MLDPT 640 (758)
Q Consensus 563 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d-~~~~-~~~~~ 640 (758)
|. . .+..-.=..++++||.+.+++|.+||+++|.|+||+.+..++..++++++|+|+..|+++ ++.- .....
T Consensus 235 ~~-----l-~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 235 WP-----L-TQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp T------S--S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTT
T ss_pred CC-----C-CcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhc
Confidence 21 1 111112345789999999999999999999999999999999877889999998888643 3221 00112
Q ss_pred CCCChhh-h-hccCCC--CCHHHHHHHHhcCcccc--c--CCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCce
Q 004368 641 IPLTTAE-W-EEWGDP--WKEEFYFYMKSYSPVDN--V--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNI 712 (758)
Q Consensus 641 ~~~~~~~-~-~e~g~p--~~~~~~~~l~~~sp~~~--i--~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~ 712 (758)
.|..... + ...|-. .+......+..+|-..+ + ++..+| ||.+.|.+|+.+|.++..-++. .+.+.+.
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~p-lL~i~~~~D~v~P~eD~~lia~----~s~~gk~ 383 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTP-LLAINGEDDPVSPIEDSRLIAE----SSTDGKA 383 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS--EEEEEETT-SSS-HHHHHHHHH----TBTT-EE
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcc-eEEeecCCCCCCCHHHHHHHHh----cCCCCce
Confidence 3321111 1 234533 33344455677776442 2 344777 9999999999999877754433 3445556
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhc
Q 004368 713 LLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 747 (758)
Q Consensus 713 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 747 (758)
..++. +.=|. +..+. +..++.||.+.|
T Consensus 384 ~~~~~--~~~~~---gy~~a---l~~~~~Wl~~~l 410 (411)
T PF06500_consen 384 LRIPS--KPLHM---GYPQA---LDEIYKWLEDKL 410 (411)
T ss_dssp EEE-S--SSHHH---HHHHH---HHHHHHHHHHHH
T ss_pred eecCC--Ccccc---chHHH---HHHHHHHHHHhc
Confidence 66662 22242 12222 344689998765
No 56
>PLN02511 hydrolase
Probab=99.54 E-value=2.4e-13 Score=148.13 Aligned_cols=243 Identities=16% Similarity=0.175 Sum_probs=144.4
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHh
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYE 565 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~ 565 (758)
.++..+...||..+.+..+.+... ......|+||++||..+.+....+......++++||.|+++|+||+|+....
T Consensus 71 ~~re~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~--- 146 (388)
T PLN02511 71 YRRECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT--- 146 (388)
T ss_pred eeEEEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC---
Confidence 355567778998887654432211 1223469999999976654432122344566789999999999999875321
Q ss_pred cccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCc--eeEEEEcCCccchhhcc--CCCCC
Q 004368 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL--FKAAVAAVPFVDVLTTM--LDPTI 641 (758)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~~~~d~~~~~--~~~~~ 641 (758)
..........+|+.+++++|..+. ...++.++|+|+||.+++..+.++|+. +.++++.++..|+.... .....
T Consensus 147 -~~~~~~~~~~~Dl~~~i~~l~~~~--~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~~ 223 (388)
T PLN02511 147 -TPQFYSASFTGDLRQVVDHVAGRY--PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKGF 223 (388)
T ss_pred -CcCEEcCCchHHHHHHHHHHHHHC--CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhccH
Confidence 011112344689999999998753 236899999999999999999999986 66666555544431000 00000
Q ss_pred --------------------------C-----------CChhhhhc------cCCCCCHHHHHHHHhcCcccccCCCCCC
Q 004368 642 --------------------------P-----------LTTAEWEE------WGDPWKEEFYFYMKSYSPVDNVKAQNYP 678 (758)
Q Consensus 642 --------------------------~-----------~~~~~~~e------~g~p~~~~~~~~l~~~sp~~~i~~~~~P 678 (758)
+ .+..++.+ +|.. ..+ +++...|+...+.++++|
T Consensus 224 ~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~-~~~--~yy~~~s~~~~L~~I~vP 300 (388)
T PLN02511 224 NNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFK-SVD--AYYSNSSSSDSIKHVRVP 300 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCC-CHH--HHHHHcCchhhhccCCCC
Confidence 0 00000100 0111 111 123456677788889998
Q ss_pred eEEEeccCCCCCCCChHH-HHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHH------HHHHHHHHHHHHHHhcC
Q 004368 679 HILVTAGLNDPRVMYSEP-AKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE------RLREAAFTYTFLMRALS 748 (758)
Q Consensus 679 ~~Li~~G~~D~~V~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~------~~~~~~~~~~fl~~~l~ 748 (758)
+||++|.+|+.+|+... ..+++ .....++++++ ++||........ .+++. +.+||.....
T Consensus 301 -tLiI~g~dDpi~p~~~~~~~~~~----~~p~~~l~~~~---~gGH~~~~E~p~~~~~~~w~~~~--i~~Fl~~~~~ 367 (388)
T PLN02511 301 -LLCIQAANDPIAPARGIPREDIK----ANPNCLLIVTP---SGGHLGWVAGPEAPFGAPWTDPV--VMEFLEALEE 367 (388)
T ss_pred -eEEEEcCCCCcCCcccCcHhHHh----cCCCEEEEECC---CcceeccccCCCCCCCCccHHHH--HHHHHHHHHH
Confidence 99999999999987543 22222 22234444554 899976433221 12332 5677766553
No 57
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.54 E-value=1.6e-13 Score=134.73 Aligned_cols=193 Identities=18% Similarity=0.202 Sum_probs=121.8
Q ss_pred EEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHH-cCcEEEEEecCCCCCCch--hHHhcccccCCcChHh
Q 004368 501 ICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGR--QWYENGKFLKKKNTFT 577 (758)
Q Consensus 501 ~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~--~~~~~~~~~~~~~~~~ 577 (758)
..|+.|+.. +.++.|+||.+||+.+......-...+..+++ +||+|+.|+......... .|.. .....+..+..
T Consensus 3 Y~lYvP~~~--~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d~~ 79 (220)
T PF10503_consen 3 YRLYVPPGA--PRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGDVA 79 (220)
T ss_pred EEEecCCCC--CCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccchh
Confidence 456667765 23578999999997654322111112346776 599999998543222222 4443 22223344556
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCH
Q 004368 578 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKE 657 (758)
Q Consensus 578 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~ 657 (758)
.+.+.+++++.+.-+|++||.+.|.|+||.|+..++..+||+|+|+...++..--... + .. .....-.-|....+
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~--~-~~--~a~~~m~~g~~~~p 154 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAA--S-GA--SALSAMRSGPRPAP 154 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccccccc--C-cc--cHHHHhhCCCCCCh
Confidence 6777899999999999999999999999999999999999999999988876321100 0 00 00000011222222
Q ss_pred HHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhc
Q 004368 658 EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREM 706 (758)
Q Consensus 658 ~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~ 706 (758)
.........+.. . -.+| ++|+||..|..|.+..+.++++.+...
T Consensus 155 ~~~~~a~~~~g~--~--~~~P-~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 155 AAAWGARSDAGA--Y--PGYP-RIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred HHHHHhhhhccC--C--CCCC-EEEEecCCCCccCcchHHHHHHHHHHc
Confidence 221111111110 1 1356 889999999999999999999988764
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.53 E-value=3.7e-13 Score=140.41 Aligned_cols=239 Identities=19% Similarity=0.221 Sum_probs=148.3
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhc
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 566 (758)
.+-.+.+.||..+......+.. .+..+||++||...... .|...+..|..+||.|+..|.||+|.+.+ ..
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~-----~~~g~Vvl~HG~~Eh~~--ry~~la~~l~~~G~~V~~~D~RGhG~S~r--~~- 79 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPE-----PPKGVVVLVHGLGEHSG--RYEELADDLAARGFDVYALDLRGHGRSPR--GQ- 79 (298)
T ss_pred ccceeecCCCceEEEEeecCCC-----CCCcEEEEecCchHHHH--HHHHHHHHHHhCCCEEEEecCCCCCCCCC--CC-
Confidence 3445677899888776554432 22389999999543322 25556778999999999999999998864 11
Q ss_pred ccccCCcChHhHHHHHHHHHHHcCC--CCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh---cc-----
Q 004368 567 GKFLKKKNTFTDFIACAEYLIKNCY--CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---TM----- 636 (758)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~---~~----- 636 (758)
......|+|+++.++.+++.-. .-..++.++||||||+++..++.+++..+.++|+.+|++.+.. ..
T Consensus 80 ---rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~ 156 (298)
T COG2267 80 ---RGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARL 156 (298)
T ss_pred ---cCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHH
Confidence 1112235555555555444321 1247999999999999999999999999999999999987652 00
Q ss_pred -C------CCCCCCChhhhhccC-CC----CCHHHHHHHHhcCcc-----------------------cccCCCCCCeEE
Q 004368 637 -L------DPTIPLTTAEWEEWG-DP----WKEEFYFYMKSYSPV-----------------------DNVKAQNYPHIL 681 (758)
Q Consensus 637 -~------~~~~~~~~~~~~e~g-~p----~~~~~~~~l~~~sp~-----------------------~~i~~~~~P~~L 681 (758)
. .+.++... . .+++ .. .+++..+.+. -+|. ....++..| +|
T Consensus 157 ~~~~~~~~~p~~~~~~-~-~~~~~~~~~~sr~~~~~~~~~-~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~P-vL 232 (298)
T COG2267 157 ALKLLGRIRPKLPVDS-N-LLEGVLTDDLSRDPAEVAAYE-ADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALP-VL 232 (298)
T ss_pred hcccccccccccccCc-c-cccCcCcchhhcCHHHHHHHh-cCCccccCCccHHHHHHHHHhhcccchhccccccCC-EE
Confidence 0 01111111 0 0000 00 1222221111 1231 123345788 99
Q ss_pred EeccCCCCCCC-ChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC--CChHHHHHHHHHHHHHHHHhcC
Q 004368 682 VTAGLNDPRVM-YSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK--SGRFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 682 i~~G~~D~~V~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~--~~~~~~~~~~~~~~~fl~~~l~ 748 (758)
|++|+.|..|+ .....++++++.... .+++.++ ++-|... .++. +-+...+..+||.+++.
T Consensus 233 ll~g~~D~vv~~~~~~~~~~~~~~~~~--~~~~~~~---g~~He~~~E~~~~-r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 233 LLQGGDDRVVDNVEGLARFFERAGSPD--KELKVIP---GAYHELLNEPDRA-REEVLKDILAWLAEALP 296 (298)
T ss_pred EEecCCCccccCcHHHHHHHHhcCCCC--ceEEecC---CcchhhhcCcchH-HHHHHHHHHHHHHhhcc
Confidence 99999999999 577767766655433 4667776 8999653 3331 13334556889887754
No 59
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.51 E-value=1.1e-12 Score=136.70 Aligned_cols=240 Identities=17% Similarity=0.172 Sum_probs=154.6
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccC---CCCCCChHHHHHHH-cCcEEEEEecCCCCCCch
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC---NDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGR 561 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~---~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~ 561 (758)
...+.+. ....|++.|+.|... ......|+|||+|||...- ..+.|......++. .+.+|+.+|||-..|.
T Consensus 63 ~~dv~~~--~~~~l~vRly~P~~~-~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh-- 137 (336)
T KOG1515|consen 63 SKDVTID--PFTNLPVRLYRPTSS-SSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEH-- 137 (336)
T ss_pred eeeeEec--CCCCeEEEEEcCCCC-CcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCC--
Confidence 3444444 344588888888775 4337899999999985433 34556666667755 5999999999987763
Q ss_pred hHHhcccccCCcChHhHHHHHHHHHHHc----CCCCCCcEEEEEeChhHHHHHHHHhhC------CCceeEEEEcCCccc
Q 004368 562 QWYENGKFLKKKNTFTDFIACAEYLIKN----CYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVD 631 (758)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~d 631 (758)
.-+..++|..+|+.|+.++ ..+|++||+|+|-|+||.+|..++.+. +-..++.|+..|++.
T Consensus 138 ---------~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 138 ---------PFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred ---------CCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 3356789999999999886 568999999999999999887776552 246799999999977
Q ss_pred hhhccCC-------CCCCCChhhhhcc---CCCCCHHHHHHHHhcCccc-----ccCCCCCCeEEEeccCCCCCCCChHH
Q 004368 632 VLTTMLD-------PTIPLTTAEWEEW---GDPWKEEFYFYMKSYSPVD-----NVKAQNYPHILVTAGLNDPRVMYSEP 696 (758)
Q Consensus 632 ~~~~~~~-------~~~~~~~~~~~e~---g~p~~~~~~~~l~~~sp~~-----~i~~~~~P~~Li~~G~~D~~V~~~~~ 696 (758)
....... ............| -.|+..... .-...+|.. ...-..+|++||+.++.|... .+.
T Consensus 209 ~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~-~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~ 285 (336)
T KOG1515|consen 209 GTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDL-DHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEG 285 (336)
T ss_pred CCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCc-CCccccccccccccCccccCCCceEEEEeCchhhh--hhh
Confidence 5432110 0000000000000 111110000 000112222 111237888999999999766 699
Q ss_pred HHHHHHHHhcCCCCceEEEEecCCCCCCCC---CChHHHHHHHHHHHHHHHH
Q 004368 697 AKFVAKLREMKTDDNILLFKCELGAGHFSK---SGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 697 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~~fl~~ 745 (758)
..|+++|++.|+.++.+.++ ++.|++. .......+......+|+.+
T Consensus 286 ~~Y~~~Lkk~Gv~v~~~~~e---~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 286 LAYAEKLKKAGVEVTLIHYE---DGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred HHHHHHHHHcCCeEEEEEEC---CCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 99999999999998865665 8888763 2223334344445566654
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.49 E-value=1.6e-13 Score=128.00 Aligned_cols=145 Identities=19% Similarity=0.272 Sum_probs=106.5
Q ss_pred EEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcE
Q 004368 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 597 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i 597 (758)
+||++||..+. ...|......|+++||.|+.+|+|+.+..... .++.++++++.+.. .|+++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~-~~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA--------------DAVERVLADIRAGY-PDPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTSHHS--------------HHHHHHHHHHHHHH-CTCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCccchh--------------HHHHHHHHHHHhhc-CCCCcE
Confidence 58999997553 33466777899999999999999998876221 24555555543322 288999
Q ss_pred EEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCC
Q 004368 598 CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNY 677 (758)
Q Consensus 598 ~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~ 677 (758)
+++|+|+||.++..++.+. +.++++|+..|+.+. +. +.+.+.
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~~----------------------------~~---------~~~~~~ 105 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPDS----------------------------ED---------LAKIRI 105 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSGC----------------------------HH---------HTTTTS
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccch----------------------------hh---------hhccCC
Confidence 9999999999999999987 789999999984110 00 112234
Q ss_pred CeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Q 004368 678 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHF 724 (758)
Q Consensus 678 P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 724 (758)
| +|+++|++|+.+++.+..+++++++ .+.+++.++ +++|+
T Consensus 106 p-v~~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~i~---g~~H~ 145 (145)
T PF12695_consen 106 P-VLFIHGENDPLVPPEQVRRLYEALP---GPKELYIIP---GAGHF 145 (145)
T ss_dssp E-EEEEEETT-SSSHHHHHHHHHHHHC---SSEEEEEET---TS-TT
T ss_pred c-EEEEEECCCCcCCHHHHHHHHHHcC---CCcEEEEeC---CCcCc
Confidence 5 9999999999999999999999987 344566665 89994
No 61
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.49 E-value=4.9e-13 Score=137.29 Aligned_cols=207 Identities=17% Similarity=0.216 Sum_probs=123.8
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (758)
..|+||++||..+... .|... ...+.+||.|+.+|+||.|...... ....+++|....+..+++. .+.
T Consensus 12 ~~~~iv~lhG~~~~~~--~~~~~-~~~l~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~~~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGS--YWAPQ-LDVLTQRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--LNI 79 (257)
T ss_pred CCCEEEEEcCCCcchh--HHHHH-HHHHHhccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--hCC
Confidence 4689999999654432 23333 3445678999999999998765321 1112445555544444433 245
Q ss_pred CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh-----------ccCCCCCCC---------Chhhh-hc---
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-----------TMLDPTIPL---------TTAEW-EE--- 650 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~-----------~~~~~~~~~---------~~~~~-~e--- 650 (758)
+++.++|+|+||+++..++.++|+.++++|+..++.+... .+....... ....| .+
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 7899999999999999999999999999998776543210 000000000 00000 00
Q ss_pred ---------cCCC-CCHH---HHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEe
Q 004368 651 ---------WGDP-WKEE---FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 717 (758)
Q Consensus 651 ---------~g~p-~~~~---~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 717 (758)
.... .... .+..+..++....++++++| +|+++|++|..+|+.+++++++.+.. .+.++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~- 233 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHP-VLLIANRDDMLVPYTQSLRLAAALPN----AQLKLLP- 233 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCcc-EEEEecCcCcccCHHHHHHHHHhcCC----ceEEEEC-
Confidence 0000 0001 11222333444556677888 99999999999999999888776542 3455665
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHHHH
Q 004368 718 ELGAGHFSKSGRFERLREAAFTYTFL 743 (758)
Q Consensus 718 ~~~~gH~~~~~~~~~~~~~~~~~~fl 743 (758)
++||.......+.+.+. +.+||
T Consensus 234 --~~gH~~~~~~~~~~~~~--i~~fl 255 (257)
T TIGR03611 234 --YGGHASNVTDPETFNRA--LLDFL 255 (257)
T ss_pred --CCCCCccccCHHHHHHH--HHHHh
Confidence 89998654444433332 45565
No 62
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.48 E-value=3.9e-13 Score=140.71 Aligned_cols=210 Identities=15% Similarity=0.124 Sum_probs=122.5
Q ss_pred CCCEEEEecCCCccCCCCC-CChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
..|.||++||.......+. +...+..+++.||.|+.+|+||.|........ ........+|+.+.++.+ +
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l------~ 99 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL------D 99 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc------C
Confidence 3477999999543322211 11234567778999999999999876432110 000011234444444332 4
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhc-----------cCC-CCCCCChhhhh------------
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT-----------MLD-PTIPLTTAEWE------------ 649 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~-----------~~~-~~~~~~~~~~~------------ 649 (758)
.+++.++|+|+||.++..++.++|++++++|+.+|....... +.. ...+. ...+.
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPS-YETLKQMLNVFLFDQSL 178 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCC-HHHHHHHHhhCccCccc
Confidence 579999999999999999999999999999988764210000 000 00000 00000
Q ss_pred --------ccCCC-CCHHHHHH-HHh--------cCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCc
Q 004368 650 --------EWGDP-WKEEFYFY-MKS--------YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 711 (758)
Q Consensus 650 --------e~g~p-~~~~~~~~-l~~--------~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~ 711 (758)
.+... ..+..... +.. .+....++++++| +|+++|++|..|++..++++++.+. +.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlli~G~~D~~v~~~~~~~~~~~~~----~~~ 253 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAK-TLVTWGRDDRFVPLDHGLKLLWNMP----DAQ 253 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCC-EEEEEccCCCcCCchhHHHHHHhCC----CCE
Confidence 00000 01111111 110 1112345567898 9999999999999988888877764 355
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 004368 712 ILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 744 (758)
Q Consensus 712 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 744 (758)
+++++ ++||.........+.+. +.+||.
T Consensus 254 ~~~i~---~agH~~~~e~p~~~~~~--i~~fl~ 281 (282)
T TIGR03343 254 LHVFS---RCGHWAQWEHADAFNRL--VIDFLR 281 (282)
T ss_pred EEEeC---CCCcCCcccCHHHHHHH--HHHHhh
Confidence 67776 89998766655555443 456764
No 63
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.48 E-value=1.7e-13 Score=137.14 Aligned_cols=189 Identities=19% Similarity=0.212 Sum_probs=107.6
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHH-HHHHcCcEEEEEecCC------CCCCchhHHhcccccCCc-ChHhHHHH----
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRG------GGELGRQWYENGKFLKKK-NTFTDFIA---- 581 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~~~RG------~g~~G~~~~~~~~~~~~~-~~~~D~~~---- 581 (758)
...|+||+.|| +|... ..+..... .+......++.++-+- +|..+..|++........ ...+++..
T Consensus 12 ~~~~lvi~LHG-~G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHG-YGDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE---TTS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECC-CCCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 46899999999 34332 11111111 1122467777776532 122223787644322211 22333333
Q ss_pred ---HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHH
Q 004368 582 ---CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEE 658 (758)
Q Consensus 582 ---~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~ 658 (758)
.++.+++.+ ++++||.+.|+|+||.+++.++.++|+.|+++|+.+|.+-..... .
T Consensus 90 l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~--------------------~- 147 (216)
T PF02230_consen 90 LDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL--------------------E- 147 (216)
T ss_dssp HHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------------H-
T ss_pred HHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------------c-
Confidence 333334445 899999999999999999999999999999999999975321100 0
Q ss_pred HHHHHHhcCcccccCCC-CCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHH
Q 004368 659 FYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAA 737 (758)
Q Consensus 659 ~~~~l~~~sp~~~i~~~-~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~ 737 (758)
...... +.| +|++||.+|++||+..+++.++.|++.+.+++...|+ +.||... .++..
T Consensus 148 -----------~~~~~~~~~p-i~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~---g~gH~i~------~~~~~ 206 (216)
T PF02230_consen 148 -----------DRPEALAKTP-ILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYP---GGGHEIS------PEELR 206 (216)
T ss_dssp -----------CCHCCCCTS--EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEET---T-SSS--------HHHHH
T ss_pred -----------ccccccCCCc-EEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcC---CCCCCCC------HHHHH
Confidence 000111 466 9999999999999999999999999999877766665 8999753 23344
Q ss_pred HHHHHHHHhc
Q 004368 738 FTYTFLMRAL 747 (758)
Q Consensus 738 ~~~~fl~~~l 747 (758)
+..+||.+++
T Consensus 207 ~~~~~l~~~~ 216 (216)
T PF02230_consen 207 DLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHhhhC
Confidence 4678988763
No 64
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.48 E-value=2.6e-11 Score=134.55 Aligned_cols=246 Identities=14% Similarity=0.095 Sum_probs=161.5
Q ss_pred CCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC-cceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcE
Q 004368 199 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDI 276 (758)
Q Consensus 199 SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~ 276 (758)
.+.+.+++|.....+....+|+++|.+++....+...+ ....+.||||| .++|+.... ...+|+++++.++. ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~--~~~~i~v~d~~~g~--~~ 227 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES--GKPEIYVQDLATGQ--RE 227 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC--CCcEEEEEECCCCC--EE
Confidence 44678899998765455789999999877666543333 35568999999 899987643 23579999998763 22
Q ss_pred EEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEcCCCCCCc
Q 004368 277 CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNS 355 (758)
Q Consensus 277 ~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~ 355 (758)
.+.... .....+.|||||+.|++.....+..+||++|+.++. .+.++..... ....|++||++|++.+++.+ ..
T Consensus 228 ~~~~~~--~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g--~~ 302 (417)
T TIGR02800 228 KVASFP--GMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQ-LTRLTNGPGIDTEPSWSPDGKSIAFTSDRGG--SP 302 (417)
T ss_pred EeecCC--CCccceEECCCCCEEEEEECCCCCccEEEEECCCCC-EEECCCCCCCCCCEEECCCCCEEEEEECCCC--Cc
Confidence 232211 122357899999999988776667899999998876 6666543222 24468999999999988763 45
Q ss_pred EEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCC
Q 004368 356 ELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPS 435 (758)
Q Consensus 356 ~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~ 435 (758)
+||.+++++. ....+...........++++++.+++.....+..++++++++. +..+. + .+.. .....
T Consensus 303 ~iy~~d~~~~-~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~--~~~~~------l--~~~~-~~~~p 370 (417)
T TIGR02800 303 QIYMMDADGG-EVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDG--GGERV------L--TDTG-LDESP 370 (417)
T ss_pred eEEEEECCCC-CEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCC--CCeEE------c--cCCC-CCCCc
Confidence 8999998763 3333443333333345666777888877766677788888763 32211 1 1111 12334
Q ss_pred CcccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 436 ESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 436 ~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
.++++++.+++....... ..++.++..+..
T Consensus 371 ~~spdg~~l~~~~~~~~~-~~l~~~~~~g~~ 400 (417)
T TIGR02800 371 SFAPNGRMILYATTRGGR-GVLGLVSTDGRF 400 (417)
T ss_pred eECCCCCEEEEEEeCCCc-EEEEEEECCCce
Confidence 667888888777764433 467766654433
No 65
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=2.2e-11 Score=135.02 Aligned_cols=235 Identities=12% Similarity=0.112 Sum_probs=149.8
Q ss_pred CCEEEEEEeCCC-CeEEEEEEEECCCCceeeccc-cCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEE
Q 004368 202 NKLVAYAEDTKG-DEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICL 278 (758)
Q Consensus 202 G~~lAy~~~~~G-~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v 278 (758)
+++|||+....+ ...++|+++|.+++....++. ......+.||||| +|+|++.+. ...+||++++.++.. ..+
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~--~~~~i~i~dl~tg~~--~~l 243 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN--KKSQLVVHDLRSGAR--KVV 243 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC--CCcEEEEEeCCCCce--EEE
Confidence 689999987644 446899999998877554432 2335669999999 899988643 235699999977632 233
Q ss_pred eeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEcCCCCCCcEE
Q 004368 279 YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSEL 357 (758)
Q Consensus 279 ~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~~L 357 (758)
.... .....+.|||||++|++.+...+..+||++|++++. .+.++..... ....|+|||++|+|.+++++ ..+|
T Consensus 244 ~~~~--g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g--~~~I 318 (429)
T PRK01742 244 ASFR--GHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSG--SPQV 318 (429)
T ss_pred ecCC--CccCceeECCCCCEEEEEEecCCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCC--CceE
Confidence 2211 122357899999999998766666789999998876 6777654322 34569999999999988753 4689
Q ss_pred EEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCc
Q 004368 358 LACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSES 437 (758)
Q Consensus 358 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~ 437 (758)
|.++..+. ..+.+ .... . ...++++++.+++... ..+.++++.. |. .. .+. .. .....+.+
T Consensus 319 ~~~~~~~~-~~~~l-~~~~-~-~~~~SpDG~~ia~~~~----~~i~~~Dl~~-g~-~~------~lt--~~-~~~~~~~~ 379 (429)
T PRK01742 319 YRMSASGG-GASLV-GGRG-Y-SAQISADGKTLVMING----DNVVKQDLTS-GS-TE------VLS--ST-FLDESPSI 379 (429)
T ss_pred EEEECCCC-CeEEe-cCCC-C-CccCCCCCCEEEEEcC----CCEEEEECCC-CC-eE------Eec--CC-CCCCCceE
Confidence 99987652 22333 3222 2 2356777888876644 2355677653 22 11 111 11 12234567
Q ss_pred ccCCcEEEEEEecCCCCCEEEEEECCCC
Q 004368 438 VFSSRILRFHYSSLRTPPSVYDYDMDMG 465 (758)
Q Consensus 438 ~~d~~~l~~~~sS~~~P~~i~~~d~~~~ 465 (758)
++++..+.+... -..-..++.++..++
T Consensus 380 sPdG~~i~~~s~-~g~~~~l~~~~~~G~ 406 (429)
T PRK01742 380 SPNGIMIIYSST-QGLGKVLQLVSADGR 406 (429)
T ss_pred CCCCCEEEEEEc-CCCceEEEEEECCCC
Confidence 888887766543 222334455554443
No 66
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.44 E-value=4.5e-12 Score=137.58 Aligned_cols=205 Identities=13% Similarity=0.104 Sum_probs=146.7
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+-.+.|||||+.|+|..-..+. ...++++|+++|+.... ...+....+.||||| +++|+...+ ...++|..++.+
T Consensus 195 ~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rd--g~~~iy~~dl~~ 271 (425)
T COG0823 195 ILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRD--GSPDIYLMDLDG 271 (425)
T ss_pred eeccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCC--CCccEEEEcCCC
Confidence 4568999999999999765552 27899999999887654 455666678999999 899987654 456799999988
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-eeEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~ 349 (758)
... .. +++.. .....++|||||++|+|.+...+..+||+++++++. .++++....+. ...|||||++++|.+..
T Consensus 272 ~~~--~~-Lt~~~-gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~-~~riT~~~~~~~~p~~SpdG~~i~~~~~~ 346 (425)
T COG0823 272 KNL--PR-LTNGF-GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ-VTRLTFSGGGNSNPVWSPDGDKIVFESSS 346 (425)
T ss_pred Ccc--ee-cccCC-ccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCc-eeEeeccCCCCcCccCCCCCCEEEEEecc
Confidence 752 22 22222 223368899999999999999999999999999887 77777655443 34599999999999844
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+ + ...++..++.+... ..+.........+.+...+..+++.....+.+.+....++
T Consensus 347 ~-g-~~~i~~~~~~~~~~-~~~lt~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~ 402 (425)
T COG0823 347 G-G-QWDIDKNDLASGGK-IRILTSTYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLD 402 (425)
T ss_pred C-C-ceeeEEeccCCCCc-EEEccccccCCCCCcCCCCceEEEeccCCCCceEEEeecc
Confidence 3 2 36788888765332 2233333333345666667777777666666666555544
No 67
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.44 E-value=7.7e-13 Score=136.63 Aligned_cols=143 Identities=20% Similarity=0.218 Sum_probs=92.6
Q ss_pred CCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccC----------------CCCCCChHHHHHHHc
Q 004368 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC----------------NDPAFNSSRLSLLDR 544 (758)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~----------------~~~~~~~~~~~l~~~ 544 (758)
.++|..|.+.+-+.++..+|++++.|++. .++.|.||++||-.+.. ....-......|+.+
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~---~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~ 159 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGA---KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR 159 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT-----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCC---CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC
Confidence 45788999999999999999999999975 47899999998732111 000012245789999
Q ss_pred CcEEEEEecCCCCCCchh-----------------HHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHH
Q 004368 545 GFIFAIAQIRGGGELGRQ-----------------WYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGL 607 (758)
Q Consensus 545 G~~v~~~~~RG~g~~G~~-----------------~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~ 607 (758)
||+|+++|.+|-||.|.. +...|+...+...++| +.+++||..+..+|++|||++|+|+||+
T Consensus 160 GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~dd-mr~lDfL~slpeVD~~RIG~~GfSmGg~ 238 (390)
T PF12715_consen 160 GYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDD-MRALDFLASLPEVDPDRIGCMGFSMGGY 238 (390)
T ss_dssp TSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHH-HHHHHHHCT-TTEEEEEEEEEEEGGGHH
T ss_pred CCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHH-HHHHHHHhcCcccCccceEEEeecccHH
Confidence 999999999988875431 1112222333445555 5599999999999999999999999999
Q ss_pred HHHHHHhhCCCceeEEEEcCC
Q 004368 608 LIGAVLNMRPDLFKAAVAAVP 628 (758)
Q Consensus 608 l~~~~~~~~p~~f~a~v~~~~ 628 (758)
.++.+++.. ++++|+|+.+-
T Consensus 239 ~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 239 RAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHHHHH--TT--EEEEES-
T ss_pred HHHHHHHcc-hhhHhHhhhhh
Confidence 999888875 56677665543
No 68
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.43 E-value=1e-11 Score=131.36 Aligned_cols=127 Identities=15% Similarity=0.146 Sum_probs=85.6
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhc
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 566 (758)
+.+.+...||..+... |.... . ...|.||++||.... ...|...+..|.++||.|+.+|.||+|......
T Consensus 22 ~~~~~~~~~~~~~~i~--y~~~G-~--~~~~~lvliHG~~~~--~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~--- 91 (302)
T PRK00870 22 HYVDVDDGDGGPLRMH--YVDEG-P--ADGPPVLLLHGEPSW--SYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT--- 91 (302)
T ss_pred eeEeecCCCCceEEEE--EEecC-C--CCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC---
Confidence 5566666667665544 22211 1 135789999995433 233555566777789999999999998753210
Q ss_pred ccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCC
Q 004368 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (758)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 628 (758)
.....++++..+.+..++++ .+.+++.++|||+||.++..++.++|++++++|+.++
T Consensus 92 ---~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 148 (302)
T PRK00870 92 ---RREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANT 148 (302)
T ss_pred ---CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCC
Confidence 11123455655555544443 2346899999999999999999999999999988765
No 69
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.42 E-value=4.1e-12 Score=135.63 Aligned_cols=241 Identities=14% Similarity=0.098 Sum_probs=131.3
Q ss_pred eeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCC--------------------C---C-ChHHHHHHHcCc
Q 004368 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP--------------------A---F-NSSRLSLLDRGF 546 (758)
Q Consensus 491 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~--------------------~---~-~~~~~~l~~~G~ 546 (758)
+.+.||..|......|+ .+..+|+++||-.+..... . | ...+..|.++||
T Consensus 2 ~~~~~g~~l~~~~~~~~------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~ 75 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGY 75 (332)
T ss_pred ccCCCCCeEEEeeeecc------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCC
Confidence 45679998887755443 2457999999943333211 1 1 234678889999
Q ss_pred EEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHc------------------CCCCCCcEEEEEeChhHHH
Q 004368 547 IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN------------------CYCTKEKLCIEGRSAGGLL 608 (758)
Q Consensus 547 ~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~------------------~~~d~~~i~i~G~S~GG~l 608 (758)
.|+.+|.||+|.....-...+.-..-..-++|+...++.+.++ .+-....+.++||||||.+
T Consensus 76 ~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i 155 (332)
T TIGR01607 76 SVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNI 155 (332)
T ss_pred cEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHH
Confidence 9999999999975432000010001111234555555554431 1111357999999999999
Q ss_pred HHHHHhhCCC--------ceeEEEEcCCccchhhc------------------c--CCCCCCCCh-h--hh-----hcc-
Q 004368 609 IGAVLNMRPD--------LFKAAVAAVPFVDVLTT------------------M--LDPTIPLTT-A--EW-----EEW- 651 (758)
Q Consensus 609 ~~~~~~~~p~--------~f~a~v~~~~~~d~~~~------------------~--~~~~~~~~~-~--~~-----~e~- 651 (758)
+..++...++ .++++|+.+|.+.+... + ..+.+.... . .+ ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 156 ALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 9988765432 58888888876532110 0 001110000 0 00 000
Q ss_pred CCCC------CHHHHHHHHhcCc--ccccCCC--CCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCC
Q 004368 652 GDPW------KEEFYFYMKSYSP--VDNVKAQ--NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 721 (758)
Q Consensus 652 g~p~------~~~~~~~l~~~sp--~~~i~~~--~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 721 (758)
-+|. ....+..+..... ...+.++ +.| +|++||.+|..|++..+.++++++... ..++++++ ++
T Consensus 236 ~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P-~Lii~G~~D~vv~~~~~~~~~~~~~~~--~~~l~~~~---g~ 309 (332)
T TIGR01607 236 FDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIP-ILFIHSKGDCVCSYEGTVSFYNKLSIS--NKELHTLE---DM 309 (332)
T ss_pred cCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCC-EEEEEeCCCCccCHHHHHHHHHhccCC--CcEEEEEC---CC
Confidence 1110 0011111111110 1133333 577 999999999999999998888766432 34566665 89
Q ss_pred CCCCCCChHHHHHHHHHHHHHHH
Q 004368 722 GHFSKSGRFERLREAAFTYTFLM 744 (758)
Q Consensus 722 gH~~~~~~~~~~~~~~~~~~fl~ 744 (758)
+|....... .-+-..++.+||.
T Consensus 310 ~H~i~~E~~-~~~v~~~i~~wL~ 331 (332)
T TIGR01607 310 DHVITIEPG-NEEVLKKIIEWIS 331 (332)
T ss_pred CCCCccCCC-HHHHHHHHHHHhh
Confidence 997654321 1112233567764
No 70
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.42 E-value=9e-12 Score=134.39 Aligned_cols=243 Identities=19% Similarity=0.180 Sum_probs=149.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC-------------------cceeEEEecCC-eEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-------------------VTASVEWAGNE-ALVYI 252 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-------------------~~~~~~wspDg-~l~y~ 252 (758)
+..+.|||||++|||+.+ .+||++++.+++.++++..+ ....+.||||| +|+|.
T Consensus 45 ~~~~~~sP~g~~~~~v~~------~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~ 118 (353)
T PF00930_consen 45 LQDAKWSPDGKYIAFVRD------NNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFL 118 (353)
T ss_dssp BSEEEE-SSSTEEEEEET------TEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEE
T ss_pred cccceeecCCCeeEEEec------CceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEE
Confidence 457899999999999985 37999999988877654433 13557899999 89999
Q ss_pred EeCCCCC-------------------------------CceEEEEEcCCCCCCcEEEee---ecCCceeeEEEEcCCCcE
Q 004368 253 TMDEILR-------------------------------PDKAWLHKLEADQSNDICLYH---EKDDIYSLGLQASESKKF 298 (758)
Q Consensus 253 ~~~~~~~-------------------------------~~~v~~~~l~~~~~~~~~v~~---~~~~~~~~~~~~S~Dg~~ 298 (758)
+.|+..- ..+|+++++.++... .+-.. .....+...+.|++|++.
T Consensus 119 ~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~-~~~~~~~~~~~~~yl~~v~W~~d~~~ 197 (353)
T PF00930_consen 119 RFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTT-ELDPPNSLNPQDYYLTRVGWSPDGKR 197 (353)
T ss_dssp EEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCC-EE---HHHHTSSEEEEEEEEEETTEE
T ss_pred EECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEE-EeeeccccCCCccCcccceecCCCcE
Confidence 8765310 124555666555321 11111 123445567899999996
Q ss_pred EEEEecCC--cceEEEEEeCCCCCceEEeeccc--ccee----eEEe-ecCCEEEEEEcCCCCCCcEEEEEeCCCCCcce
Q 004368 299 LFIASESK--ITRFVFYLDVSKPEELRVLTPRV--VGVD----TAAS-HRGNHFFITRRSDELFNSELLACPVDNTSETT 369 (758)
Q Consensus 299 l~~~s~~~--~~~~l~~~d~~~~~~~~~l~~~~--~~~~----~~~s-~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~ 369 (758)
|++...++ ....++++|..++. .+.+.... ..+. ..+. +++..+++++.++| ..+|+.++.++ +..+
T Consensus 198 l~~~~~nR~q~~~~l~~~d~~tg~-~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G--~~hly~~~~~~-~~~~ 273 (353)
T PF00930_consen 198 LWVQWLNRDQNRLDLVLCDASTGE-TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG--YRHLYLYDLDG-GKPR 273 (353)
T ss_dssp EEEEEEETTSTEEEEEEEEECTTT-CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS--SEEEEEEETTS-SEEE
T ss_pred EEEEEcccCCCEEEEEEEECCCCc-eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC--CcEEEEEcccc-ccee
Confidence 66655443 44678889998776 33332211 1121 1243 78888888888764 67999999876 3345
Q ss_pred eeecCCCCc-eeeeEEEeCCEEEEEEEeCC--eeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEE
Q 004368 370 VLIPHRESV-KLQDIQLFIDHLAVYEREGG--LQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRF 446 (758)
Q Consensus 370 ~l~~~~~~~-~~~~~~~~~~~l~~~~~~~g--~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~ 446 (758)
+++.....+ .+..++..++.++|.+..+. ..+|+.++++. ++.+++|+... ... ....++++++.++.
T Consensus 274 ~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~-~~~~~~LT~~~------~~~--~~~~~Spdg~y~v~ 344 (353)
T PF00930_consen 274 QLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDS-GGEPKCLTCED------GDH--YSASFSPDGKYYVD 344 (353)
T ss_dssp ESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTE-TTEEEESSTTS------STT--EEEEE-TTSSEEEE
T ss_pred ccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCC-CCCeEeccCCC------CCc--eEEEECCCCCEEEE
Confidence 576665554 34455555678988887644 45555555551 44444443221 111 13456789999999
Q ss_pred EEecCCCCC
Q 004368 447 HYSSLRTPP 455 (758)
Q Consensus 447 ~~sS~~~P~ 455 (758)
+++++.+|+
T Consensus 345 ~~s~~~~P~ 353 (353)
T PF00930_consen 345 TYSGPDTPP 353 (353)
T ss_dssp EEESSSSCE
T ss_pred EEcCCCCCC
Confidence 999999985
No 71
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.41 E-value=3.6e-12 Score=138.64 Aligned_cols=219 Identities=20% Similarity=0.263 Sum_probs=148.8
Q ss_pred CceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCC-CccCCCC---CC--ChHHHHHHHcCcEEEEEecCCC
Q 004368 483 NYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS-YEICNDP---AF--NSSRLSLLDRGFIFAIAQIRGG 556 (758)
Q Consensus 483 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg-~~~~~~~---~~--~~~~~~l~~~G~~v~~~~~RG~ 556 (758)
.+..+.+.++.+||++|.+.|++|++. ++.|+++...=. |...... .. .+....|+.+||+|+..|+||.
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~~----g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~ 91 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAGA----GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGR 91 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCCC----CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccc
Confidence 366778999999999999999999875 789999987622 2222111 11 1111368999999999999999
Q ss_pred CCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc
Q 004368 557 GELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 636 (758)
Q Consensus 557 g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~ 636 (758)
+++...|..- .+ .+.+|-.++|+||+++.+.| .+||.+|.||+|+...++|+..|.-.||++...+..|+-+..
T Consensus 92 ~~SeG~~~~~----~~-~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~ 165 (563)
T COG2936 92 GGSEGVFDPE----SS-REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDD 165 (563)
T ss_pred ccCCccccee----cc-ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeeccccccccccccc
Confidence 9887766532 22 46799999999999999986 899999999999999999988888889999999988843211
Q ss_pred -------------------CCCCC-----C--------CChh--hhhcc------CCCC-------CHHHHHHHHhcCcc
Q 004368 637 -------------------LDPTI-----P--------LTTA--EWEEW------GDPW-------KEEFYFYMKSYSPV 669 (758)
Q Consensus 637 -------------------~~~~~-----~--------~~~~--~~~e~------g~p~-------~~~~~~~l~~~sp~ 669 (758)
+.... + .... .|.+. +.|. .+-...+++..+-.
T Consensus 166 ~~~~G~~~~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~~ 245 (563)
T COG2936 166 AFYGGGAELNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDRV 245 (563)
T ss_pred cccCcchhhhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCcc
Confidence 00000 0 0000 00000 1110 00001124445556
Q ss_pred cccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEE
Q 004368 670 DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 716 (758)
Q Consensus 670 ~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 716 (758)
....++++| +|.+.|..|. -...+.++++.++.. +..+++-+
T Consensus 246 ~d~~~i~vP-~L~i~gW~D~--~l~~~~~~~~~~~~r--~~~lvvgP 287 (563)
T COG2936 246 ADLSKIKVP-ALVIGGWSDG--YLHTAIKLFAFLRSR--PVKLVVGP 287 (563)
T ss_pred cccccCCCc-EEEEcccccc--cccchHHHhhhcccC--CceeEEcc
Confidence 667788998 9999999997 445777888888875 23344443
No 72
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.40 E-value=2.6e-12 Score=131.05 Aligned_cols=199 Identities=18% Similarity=0.206 Sum_probs=118.5
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (758)
..|+||++||.... ...|..... .+.+||.|+.+|+||.|..... ....+++++.+.+..+++.- +.
T Consensus 12 ~~~~li~~hg~~~~--~~~~~~~~~-~l~~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~~--~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTD--LRMWDPVLP-ALTPDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDHL--GI 78 (251)
T ss_pred CCCeEEEEcCcccc--hhhHHHHHH-HhhcccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHh--CC
Confidence 46899999994332 223444433 4457999999999999876321 12235667666666655542 34
Q ss_pred CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhc---------cCCCCCC-CC---hhhh--hccCCCCCH--
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTT---------MLDPTIP-LT---TAEW--EEWGDPWKE-- 657 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~---------~~~~~~~-~~---~~~~--~e~g~p~~~-- 657 (758)
+++.++|+|+||+++..++.++|++++++|+.++...+... +...... .. ...+ ..+..+...
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 78999999999999999999999999988877654221100 0000000 00 0000 011111000
Q ss_pred HHH----------------HHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCC
Q 004368 658 EFY----------------FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 721 (758)
Q Consensus 658 ~~~----------------~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 721 (758)
+.+ ..+...+....++++++| +|+++|++|..+|.....++.+.+. ..+.+.++ ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~---~~ 230 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVP-TLCIAGDQDGSTPPELVREIADLVP----GARFAEIR---GA 230 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCC-eEEEEeccCCcCChHHHHHHHHhCC----CceEEEEC---CC
Confidence 000 111122223445566888 9999999999999988877766653 23566665 89
Q ss_pred CCCCCCChHHHHH
Q 004368 722 GHFSKSGRFERLR 734 (758)
Q Consensus 722 gH~~~~~~~~~~~ 734 (758)
||.......+.+.
T Consensus 231 gH~~~~~~p~~~~ 243 (251)
T TIGR02427 231 GHIPCVEQPEAFN 243 (251)
T ss_pred CCcccccChHHHH
Confidence 9976544444443
No 73
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.40 E-value=5.8e-11 Score=128.98 Aligned_cols=233 Identities=14% Similarity=0.117 Sum_probs=154.7
Q ss_pred CCCeEEEEEEEECCCCceeeccccC-cceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeE
Q 004368 212 KGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLG 289 (758)
Q Consensus 212 ~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~ 289 (758)
.+.-.++|++.|-++-.....+... ....+.|+||+ .++|....... +.++|+.++.++.....+-+.. ....
T Consensus 168 ~~~~~~~l~~~D~dg~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~g----~~~~ 242 (425)
T COG0823 168 GGPLPYELALGDYDGYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFNG----NNGA 242 (425)
T ss_pred cCCCCceEEEEccCCcceeEecccCcceeccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccCC----ccCC
Confidence 3445689999998733333333332 24458999999 89998775433 2579999999885433222221 2235
Q ss_pred EEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc-ceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcc
Q 004368 290 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV-GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET 368 (758)
Q Consensus 290 ~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~ 368 (758)
+.|||||++|+|.....+..+||++|+.++. .+.|+.... .....|+|||++++|.+++.|. -+|++++.++. ..
T Consensus 243 P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~--p~I~~~~~~g~-~~ 318 (425)
T COG0823 243 PAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGR--PQIYLYDLEGS-QV 318 (425)
T ss_pred ccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCC--cceEEECCCCC-ce
Confidence 7899999999999999999999999999887 555655322 2356799999999999999864 48999999873 34
Q ss_pred eeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEE
Q 004368 369 TVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHY 448 (758)
Q Consensus 369 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~ 448 (758)
+.++..........++++++++++.....|...+.++++..++. ...++ . .+.....++..++..+.|..
T Consensus 319 ~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~-~~~lt--------~-~~~~e~ps~~~ng~~i~~~s 388 (425)
T COG0823 319 TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK-IRILT--------S-TYLNESPSWAPNGRMIMFSS 388 (425)
T ss_pred eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCc-EEEcc--------c-cccCCCCCcCCCCceEEEec
Confidence 55665555555788999999999888666665666666653221 11111 1 11223455667777776655
Q ss_pred ecCCCCCEEEEEECCC
Q 004368 449 SSLRTPPSVYDYDMDM 464 (758)
Q Consensus 449 sS~~~P~~i~~~d~~~ 464 (758)
.+. .-+.++..+..+
T Consensus 389 ~~~-~~~~l~~~s~~g 403 (425)
T COG0823 389 GQG-GGSVLSLVSLDG 403 (425)
T ss_pred cCC-CCceEEEeeccc
Confidence 555 334455554433
No 74
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.40 E-value=9.7e-12 Score=131.06 Aligned_cols=214 Identities=16% Similarity=0.154 Sum_probs=126.3
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
.|.||++||..+.+ ..|......|.++ |.|+++|.||.|.+...-.. ........+++|+...+..++++-. .+
T Consensus 29 ~~~vlllHG~~~~~--~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~-~~~~~~~~~~~~~a~~l~~~l~~l~--~~ 102 (294)
T PLN02824 29 GPALVLVHGFGGNA--DHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPR-SAPPNSFYTFETWGEQLNDFCSDVV--GD 102 (294)
T ss_pred CCeEEEECCCCCCh--hHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccc-cccccccCCHHHHHHHHHHHHHHhc--CC
Confidence 47899999965543 3466666777765 69999999999976431000 0000123456676666655554322 37
Q ss_pred cEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc----------------CCCCCC--------CCh----hh
Q 004368 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----------------LDPTIP--------LTT----AE 647 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~----------------~~~~~~--------~~~----~~ 647 (758)
++.++|+|+||.++..++.++|++++++|+.++........ +..... ... ..
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNI 182 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHH
Confidence 89999999999999999999999999999987643211000 000000 000 00
Q ss_pred h-hccCCC--CCHHHH----------------HHHHhcC----cccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHH
Q 004368 648 W-EEWGDP--WKEEFY----------------FYMKSYS----PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLR 704 (758)
Q Consensus 648 ~-~e~g~p--~~~~~~----------------~~l~~~s----p~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~ 704 (758)
+ ..|++. ..++.. ..+..++ +...+.++++| +|+++|.+|..++...+.++.+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lvi~G~~D~~~~~~~~~~~~~~-- 259 (294)
T PLN02824 183 LCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCP-VLIAWGEKDPWEPVELGRAYANF-- 259 (294)
T ss_pred HHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCC-eEEEEecCCCCCChHHHHHHHhc--
Confidence 0 012211 111111 1111111 12335567888 99999999999998877664332
Q ss_pred hcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 004368 705 EMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 705 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 745 (758)
....+++.++ ++||.......+.+... +.+||.+
T Consensus 260 --~~~~~~~~i~---~~gH~~~~e~p~~~~~~--i~~fl~~ 293 (294)
T PLN02824 260 --DAVEDFIVLP---GVGHCPQDEAPELVNPL--IESFVAR 293 (294)
T ss_pred --CCccceEEeC---CCCCChhhhCHHHHHHH--HHHHHhc
Confidence 2234567776 89998765555554443 5677754
No 75
>PLN00021 chlorophyllase
Probab=99.40 E-value=3.3e-11 Score=126.31 Aligned_cols=119 Identities=19% Similarity=0.241 Sum_probs=89.6
Q ss_pred CeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcCh
Q 004368 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 575 (758)
Q Consensus 496 G~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~ 575 (758)
...+|+.++.|... ++.|+||++||..+. ...|......|+++||+|+.+|++|.+.. .....
T Consensus 36 ~~~~p~~v~~P~~~----g~~PvVv~lHG~~~~--~~~y~~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~ 98 (313)
T PLN00021 36 SPPKPLLVATPSEA----GTYPVLLFLHGYLLY--NSFYSQLLQHIASHGFIVVAPQLYTLAGP-----------DGTDE 98 (313)
T ss_pred CCCceEEEEeCCCC----CCCCEEEEECCCCCC--cccHHHHHHHHHhCCCEEEEecCCCcCCC-----------Cchhh
Confidence 34689998888653 679999999996543 23455666788999999999999874321 11234
Q ss_pred HhHHHHHHHHHHHc--------CCCCCCcEEEEEeChhHHHHHHHHhhCCC-----ceeEEEEcCCccc
Q 004368 576 FTDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD-----LFKAAVAAVPFVD 631 (758)
Q Consensus 576 ~~D~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-----~f~a~v~~~~~~d 631 (758)
++|..++++|+.+. ...|.++++++|||+||+++..++..+++ .|+++|+..|+..
T Consensus 99 i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 99 IKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 56777778887652 34678999999999999999999988875 5788888888754
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.39 E-value=1.2e-11 Score=124.40 Aligned_cols=240 Identities=20% Similarity=0.216 Sum_probs=141.0
Q ss_pred EeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccc
Q 004368 490 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 569 (758)
Q Consensus 490 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~ 569 (758)
.+...||..+-....-++. +...|+||..||--|++.++.-......+.++||.|+++|.||.++.-..- ..
T Consensus 53 ~v~~pdg~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~----p~ 124 (345)
T COG0429 53 RLETPDGGFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTS----PR 124 (345)
T ss_pred EEEcCCCCEEEEeeccCcc----ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccC----cc
Confidence 4445566655554444332 245699999999777766662233345777899999999999988643210 01
Q ss_pred cCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCC---ceeEEEEcCCccchhhc--c--------
Q 004368 570 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFVDVLTT--M-------- 636 (758)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~~~~d~~~~--~-------- 636 (758)
.......+|+..++++|.+++. +.++.++|.|.||.+.+..+.+..+ +-+|++..+|+ |+... .
T Consensus 125 ~yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~-Dl~~~~~~l~~~~s~~ 201 (345)
T COG0429 125 LYHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPF-DLEACAYRLDSGFSLR 201 (345)
T ss_pred eecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHH-HHHHHHHHhcCchhhh
Confidence 1112334899999999998765 6899999999999554444443322 33555555553 43110 0
Q ss_pred --------------------CCCCCCCChhh-------hhccCC----C--CCHHHHHHHHhcCcccccCCCCCCeEEEe
Q 004368 637 --------------------LDPTIPLTTAE-------WEEWGD----P--WKEEFYFYMKSYSPVDNVKAQNYPHILVT 683 (758)
Q Consensus 637 --------------------~~~~~~~~~~~-------~~e~g~----p--~~~~~~~~l~~~sp~~~i~~~~~P~~Li~ 683 (758)
+..++|.+..+ ..||-+ | .-++..+|.+..|++..+.+++.| +||+
T Consensus 202 ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~P-tLii 280 (345)
T COG0429 202 LYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKP-TLII 280 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccccccc-eEEE
Confidence 01122222000 012211 1 122334566889999999999999 9999
Q ss_pred ccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCC----hHHHHHHHHHHHHHHHHhcC
Q 004368 684 AGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG----RFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 684 ~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~----~~~~~~~~~~~~~fl~~~l~ 748 (758)
|+.+|+.+++..--+.-.. .+. .+.|.....+||.+.-+ ....+.+ ..+.+||...+.
T Consensus 281 ~A~DDP~~~~~~iP~~~~~---~np---~v~l~~t~~GGHvGfl~~~~~~~~~W~~-~ri~~~l~~~~~ 342 (345)
T COG0429 281 NAKDDPFMPPEVIPKLQEM---LNP---NVLLQLTEHGGHVGFLGGKLLHPQMWLE-QRILDWLDPFLE 342 (345)
T ss_pred ecCCCCCCChhhCCcchhc---CCC---ceEEEeecCCceEEeccCccccchhhHH-HHHHHHHHHHHh
Confidence 9999999986332222111 222 23444445899965321 2221222 346788877654
No 77
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.39 E-value=1.1e-11 Score=122.43 Aligned_cols=128 Identities=20% Similarity=0.245 Sum_probs=99.5
Q ss_pred CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHH-cCcEEEEEecCCCCCCchhHHhcccccC--
Q 004368 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLK-- 571 (758)
Q Consensus 495 dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~-- 571 (758)
+|...+.+++.|++. + ...|+||+.||+.+......-..-+..+++ .||.|++|| ++...|...+...+
T Consensus 43 ~g~~r~y~l~vP~g~-~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~ 114 (312)
T COG3509 43 NGLKRSYRLYVPPGL-P--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFG 114 (312)
T ss_pred CCCccceEEEcCCCC-C--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCC
Confidence 566788998999886 2 344999999998765433222233456766 499999994 56666654444333
Q ss_pred ------CcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCcc
Q 004368 572 ------KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (758)
Q Consensus 572 ------~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~ 630 (758)
+..++..+.+.++.|+.+.-+||.||.|.|.|+||.|+.+++..+|++|+|+...++..
T Consensus 115 p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 115 PADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 34567778889999999999999999999999999999999999999999998888765
No 78
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.38 E-value=3e-12 Score=124.94 Aligned_cols=177 Identities=19% Similarity=0.188 Sum_probs=120.0
Q ss_pred CCCeEEEEEEEeeccccccCCCC-CEEEEecCCCccCCCCCCChH-----HHHHH--HcCcEEEEEecCCCCCCchhHHh
Q 004368 494 SDGTQIPICIVYRKNLVKLDGSD-PLLLYGYGSYEICNDPAFNSS-----RLSLL--DRGFIFAIAQIRGGGELGRQWYE 565 (758)
Q Consensus 494 ~dG~~i~~~l~~p~~~~~~~~~~-P~vl~~hGg~~~~~~~~~~~~-----~~~l~--~~G~~v~~~~~RG~g~~G~~~~~ 565 (758)
.-|.+++..++.|++. .+++++ |++|+.||+...+... .... +..|+ +-++-|+.|.+- .-|.+
T Consensus 169 ~tgneLkYrly~Pkdy-~pdkky~PLvlfLHgagq~g~dn-~~~l~sg~gaiawa~pedqcfVlAPQy~------~if~d 240 (387)
T COG4099 169 STGNELKYRLYTPKDY-APDKKYYPLVLFLHGAGQGGSDN-DKVLSSGIGAIAWAGPEDQCFVLAPQYN------PIFAD 240 (387)
T ss_pred ccCceeeEEEeccccc-CCCCccccEEEEEecCCCCCchh-hhhhhcCccceeeecccCceEEEccccc------ccccc
Confidence 4577899999999998 888887 9999999974433221 1000 11111 123445544421 11111
Q ss_pred cccccCCcChHhHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCC
Q 004368 566 NGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLT 644 (758)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~ 644 (758)
.. .+-.+-....++.+. -|.++..+|.+||.++|.|.||+.+.+++.++||.|+|++..+|=-|-
T Consensus 241 ~e--~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------ 306 (387)
T COG4099 241 SE--EKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------ 306 (387)
T ss_pred cc--cccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch------------
Confidence 10 111222344555555 678889999999999999999999999999999999999988873220
Q ss_pred hhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEE
Q 004368 645 TAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFK 716 (758)
Q Consensus 645 ~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 716 (758)
+ + ..+++. +.| +.|.|+.+|.++|...++-.+++|++.+.+++..-|.
T Consensus 307 ---------v-------~--lv~~lk-----~~p-iWvfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 307 ---------V-------Y--LVRTLK-----KAP-IWVFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred ---------h-------h--hhhhhc-----cCc-eEEEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 0 0 011111 355 9999999999999999999999999988766555444
No 79
>PRK11071 esterase YqiA; Provisional
Probab=99.38 E-value=7.6e-12 Score=122.04 Aligned_cols=170 Identities=15% Similarity=0.094 Sum_probs=104.6
Q ss_pred CEEEEecCCCccCCCCCCChH--HHHHHH--cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 517 PLLLYGYGSYEICNDPAFNSS--RLSLLD--RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~--~~~l~~--~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
|.||++||-.++.. .|... ...+.+ .+|.|+.+|.||.+ ++..+.++.++++.
T Consensus 2 p~illlHGf~ss~~--~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~-- 58 (190)
T PRK11071 2 STLLYLHGFNSSPR--SAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEH-- 58 (190)
T ss_pred CeEEEECCCCCCcc--hHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc--
Confidence 78999999433322 23322 233434 38999999999753 24555556655543
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCccccc
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 672 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i 672 (758)
+.+++.++|+|+||+++..++.++|. + +|+.+|..+....... -.......+..-+.....+.++.++.+.+.. +
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i 133 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTD-YLGENENPYTGQQYVLESRHIYDLKVMQIDP-L 133 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHH-hcCCcccccCCCcEEEcHHHHHHHHhcCCcc-C
Confidence 23689999999999999999999883 3 4566666664222110 0000000000000112345555555555444 3
Q ss_pred CCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Q 004368 673 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 726 (758)
Q Consensus 673 ~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 726 (758)
. ...| ++|+||++|..||+.++.+++++. +.++++ +++|.+.
T Consensus 134 ~-~~~~-v~iihg~~De~V~~~~a~~~~~~~-------~~~~~~---ggdH~f~ 175 (190)
T PRK11071 134 E-SPDL-IWLLQQTGDEVLDYRQAVAYYAAC-------RQTVEE---GGNHAFV 175 (190)
T ss_pred C-Chhh-EEEEEeCCCCcCCHHHHHHHHHhc-------ceEEEC---CCCcchh
Confidence 3 4555 899999999999999999999842 344554 9999873
No 80
>PLN02872 triacylglycerol lipase
Probab=99.37 E-value=6.2e-12 Score=135.85 Aligned_cols=145 Identities=21% Similarity=0.267 Sum_probs=95.2
Q ss_pred CCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCC----hHHHHHHHcCcEEEEEecCCC
Q 004368 481 TNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIRGG 556 (758)
Q Consensus 481 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~~~RG~ 556 (758)
..+|.+|+..+++.||..|.+.-+.+........+.|.|++.||....+..+... .....|+++||.|..+|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 3478889999999999988776543222101123468899999976555443222 233457889999999999997
Q ss_pred CC-CchhHHhcc-c----ccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCC---ceeEEEEcC
Q 004368 557 GE-LGRQWYENG-K----FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAV 627 (758)
Q Consensus 557 g~-~G~~~~~~~-~----~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~ 627 (758)
+. +|....... . ..+......|+.++++++.+.. .+++.++|+|+||.++.+++ .+|+ +++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc---CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhc
Confidence 63 232111110 0 1111233469999999997653 37899999999999988666 4676 466666666
Q ss_pred Cc
Q 004368 628 PF 629 (758)
Q Consensus 628 ~~ 629 (758)
|+
T Consensus 195 P~ 196 (395)
T PLN02872 195 PI 196 (395)
T ss_pred ch
Confidence 64
No 81
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.37 E-value=8.1e-12 Score=130.34 Aligned_cols=206 Identities=18% Similarity=0.203 Sum_probs=122.2
Q ss_pred CEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCc
Q 004368 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 596 (758)
|.||++||..+... .|...+..| .++|.|+++|+||+|.+... ....+++++.+.++.+++. .+.++
T Consensus 26 ~plvllHG~~~~~~--~w~~~~~~L-~~~~~vi~~Dl~G~G~S~~~--------~~~~~~~~~~~~~~~~i~~--l~~~~ 92 (276)
T TIGR02240 26 TPLLIFNGIGANLE--LVFPFIEAL-DPDLEVIAFDVPGVGGSSTP--------RHPYRFPGLAKLAARMLDY--LDYGQ 92 (276)
T ss_pred CcEEEEeCCCcchH--HHHHHHHHh-ccCceEEEECCCCCCCCCCC--------CCcCcHHHHHHHHHHHHHH--hCcCc
Confidence 67899999544332 344444444 45899999999999976421 1123455555555544444 23468
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchh------h---ccCCCC--C-CCCh-hh-hhccC-----CCCC-
Q 004368 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL------T---TMLDPT--I-PLTT-AE-WEEWG-----DPWK- 656 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~------~---~~~~~~--~-~~~~-~~-~~e~g-----~p~~- 656 (758)
+.++|+|+||++++.++.++|++++++|+.++..... . .+.... . +... .. ...++ ++..
T Consensus 93 ~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (276)
T TIGR02240 93 VNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELA 172 (276)
T ss_pred eEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhh
Confidence 9999999999999999999999999999988764311 0 000000 0 0000 00 00000 0100
Q ss_pred -------------HHHHHHHHh--cCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCC
Q 004368 657 -------------EEFYFYMKS--YSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGA 721 (758)
Q Consensus 657 -------------~~~~~~l~~--~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 721 (758)
...+..+.. ......++++++| +|+++|++|+.||+.++.++.+.+.. .++++++ +
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~v~~~~~~~l~~~~~~----~~~~~i~---~- 243 (276)
T TIGR02240 173 MAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHKIQQP-TLVLAGDDDPIIPLINMRLLAWRIPN----AELHIID---D- 243 (276)
T ss_pred hhhhhhcccCCCchHHHHHHHHcCCchhhHhhcCCCC-EEEEEeCCCCcCCHHHHHHHHHhCCC----CEEEEEc---C-
Confidence 001111111 1122335677898 99999999999999988888776542 3455663 4
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 722 GHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 722 gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
||.......+.+.+. +.+|+.+.
T Consensus 244 gH~~~~e~p~~~~~~--i~~fl~~~ 266 (276)
T TIGR02240 244 GHLFLITRAEAVAPI--IMKFLAEE 266 (276)
T ss_pred CCchhhccHHHHHHH--HHHHHHHh
Confidence 998765555544443 56777654
No 82
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.37 E-value=2.6e-11 Score=126.37 Aligned_cols=206 Identities=17% Similarity=0.180 Sum_probs=121.1
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
.|+||++||..+.. ..|......| .++|.|+.+|+||.|...... ....+++++.+.+..++++- +.+
T Consensus 28 ~~~vv~~hG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~~--~~~ 95 (278)
T TIGR03056 28 GPLLLLLHGTGAST--HSWRDLMPPL-ARSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAAE--GLS 95 (278)
T ss_pred CCeEEEEcCCCCCH--HHHHHHHHHH-hhCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHHc--CCC
Confidence 58999999965432 2344444444 557999999999998654221 11345677777666666542 336
Q ss_pred cEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCC----------CCCCh----------hhhh----cc
Q 004368 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT----------IPLTT----------AEWE----EW 651 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~----------~~~~~----------~~~~----e~ 651 (758)
++.++|+|+||.+++.++.++|++++++|+.++..+......... .++.. ..+. ..
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT 175 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc
Confidence 789999999999999999999998888887766443211000000 00000 0000 00
Q ss_pred CCCCCH---HHH--------------HHHHhcCc---ccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCc
Q 004368 652 GDPWKE---EFY--------------FYMKSYSP---VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 711 (758)
Q Consensus 652 g~p~~~---~~~--------------~~l~~~sp---~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~ 711 (758)
+...++ ..+ ..+..++. ...++++++| +|+++|++|..||+..++++.+.+. ..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P-~lii~g~~D~~vp~~~~~~~~~~~~----~~~ 250 (278)
T TIGR03056 176 GSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIP-LHLIAGEEDKAVPPDESKRAATRVP----TAT 250 (278)
T ss_pred ccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCC-EEEEEeCCCcccCHHHHHHHHHhcc----CCe
Confidence 010000 001 11111111 1234566888 9999999999999988877766553 234
Q ss_pred eEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 004368 712 ILLFKCELGAGHFSKSGRFERLREAAFTYTFL 743 (758)
Q Consensus 712 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 743 (758)
++.++ ++||.......+.+.+. +.+||
T Consensus 251 ~~~~~---~~gH~~~~e~p~~~~~~--i~~f~ 277 (278)
T TIGR03056 251 LHVVP---GGGHLVHEEQADGVVGL--ILQAA 277 (278)
T ss_pred EEEEC---CCCCcccccCHHHHHHH--HHHHh
Confidence 56665 88998764444433332 34554
No 83
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.37 E-value=2.5e-11 Score=126.70 Aligned_cols=107 Identities=17% Similarity=0.101 Sum_probs=74.8
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHH-cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
+.|.||++||+++.... +......++. .||.|+.+|.||.|...... ......+++++.+.+..+++.- +
T Consensus 24 ~~~~vl~~hG~~g~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~ 94 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHE--YLENLRELLKEEGREVIMYDQLGCGYSDQPD-----DSDELWTIDYFVDELEEVREKL--G 94 (288)
T ss_pred CCCeEEEEcCCCCccHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCC-----cccccccHHHHHHHHHHHHHHc--C
Confidence 35788999998776432 2223344444 49999999999988653210 0010234566666666665543 3
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCcc
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~ 630 (758)
.+++.++|+|+||.++..++.++|++++++|+.+++.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 4679999999999999999999999999999877653
No 84
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.36 E-value=3.1e-11 Score=127.92 Aligned_cols=122 Identities=19% Similarity=0.148 Sum_probs=81.2
Q ss_pred EeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccc
Q 004368 490 WASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 569 (758)
Q Consensus 490 ~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~ 569 (758)
++...||.+|.... .+ . ...+.||++||+++.... ......+..++|.|+.+|+||.|..... .
T Consensus 8 ~~~~~~~~~l~y~~---~g--~--~~~~~lvllHG~~~~~~~---~~~~~~~~~~~~~vi~~D~~G~G~S~~~------~ 71 (306)
T TIGR01249 8 YLNVSDNHQLYYEQ---SG--N--PDGKPVVFLHGGPGSGTD---PGCRRFFDPETYRIVLFDQRGCGKSTPH------A 71 (306)
T ss_pred eEEcCCCcEEEEEE---Cc--C--CCCCEEEEECCCCCCCCC---HHHHhccCccCCEEEEECCCCCCCCCCC------C
Confidence 34455777765432 11 1 124568999997665432 1222334457999999999998865421 0
Q ss_pred cCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 570 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
......+.|+.+.+..+.+.- +.+++.++|+|+||+++..++.++|++++++|+..++
T Consensus 72 ~~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~ 129 (306)
T TIGR01249 72 CLEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIF 129 (306)
T ss_pred CcccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccc
Confidence 111234567777777766552 3468999999999999999999999999988877654
No 85
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.34 E-value=2.2e-11 Score=126.59 Aligned_cols=131 Identities=14% Similarity=0.023 Sum_probs=91.7
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCC--CCCChHHHHHHHcCcEEEEEecCCCCCCchhHH
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWY 564 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~ 564 (758)
+.+.+.. +|..+.+.+..|.+. +.+.||++|||...... ..+...+..|+++||.|+.+|+||+|......
T Consensus 3 ~~~~~~~-~~~~l~g~~~~p~~~-----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~- 75 (274)
T TIGR03100 3 RALTFSC-EGETLVGVLHIPGAS-----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN- 75 (274)
T ss_pred eeEEEEc-CCcEEEEEEEcCCCC-----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC-
Confidence 3455654 567799988887643 23567777876553322 22333456788899999999999999754221
Q ss_pred hcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccc
Q 004368 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (758)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d 631 (758)
..-....+|+.+++++|.++. ...++|.++|+|+||++++.++.. ++.++++|+.+|++.
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 111234579999999998752 123679999999999998888764 568999999998744
No 86
>COG0400 Predicted esterase [General function prediction only]
Probab=99.34 E-value=2.7e-11 Score=117.80 Aligned_cols=187 Identities=18% Similarity=0.212 Sum_probs=123.0
Q ss_pred CCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchh---HHhcccccCC--cChHhHHHHHHHHHH
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ---WYENGKFLKK--KNTFTDFIACAEYLI 587 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~---~~~~~~~~~~--~~~~~D~~~~~~~l~ 587 (758)
+...|+||+.||- | .....|.+ +..+..-.+.++.++-+-.-+.+.. |...+....+ ......+.+.++.++
T Consensus 15 ~p~~~~iilLHG~-G-gde~~~~~-~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 15 DPAAPLLILLHGL-G-GDELDLVP-LPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred CCCCcEEEEEecC-C-CChhhhhh-hhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 3457899999993 3 34444555 3333333466666654322222233 3332222211 122344555666667
Q ss_pred HcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcC
Q 004368 588 KNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYS 667 (758)
Q Consensus 588 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~s 667 (758)
.+..+|++|+.+.|+|.|+.+++.++.++|++|+++|+..|..=... .
T Consensus 92 ~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------------------~ 139 (207)
T COG0400 92 EEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------------------E 139 (207)
T ss_pred HHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------------------c
Confidence 77788999999999999999999999999999999999888532100 0
Q ss_pred cccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhc
Q 004368 668 PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRAL 747 (758)
Q Consensus 668 p~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 747 (758)
+..+.+ ..| +|++||..|++||..++.++.+.|++.|.+++...+ ..||.... ..+ ....+|+.+.+
T Consensus 140 ~~~~~~--~~p-ill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~----~~GH~i~~---e~~---~~~~~wl~~~~ 206 (207)
T COG0400 140 LLPDLA--GTP-ILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWH----EGGHEIPP---EEL---EAARSWLANTL 206 (207)
T ss_pred cccccC--CCe-EEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEe----cCCCcCCH---HHH---HHHHHHHHhcc
Confidence 000111 345 999999999999999999999999999988876666 38997542 222 23456887654
No 87
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.32 E-value=1.5e-10 Score=118.06 Aligned_cols=214 Identities=14% Similarity=0.031 Sum_probs=132.8
Q ss_pred EEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCC--CCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhc
Q 004368 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICN--DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (758)
Q Consensus 489 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 566 (758)
+.+++..|. +.+++..|.+. ++.|+||++||..+... ...|......|+++||.|+.+|+||+|........
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~~----~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~- 76 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVAV----GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA- 76 (266)
T ss_pred EEecCCCCc-EEEEEecCCCC----CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc-
Confidence 456666775 55654444432 34789999999432211 12233345678889999999999999876432211
Q ss_pred ccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc----------
Q 004368 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM---------- 636 (758)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~---------- 636 (758)
..-..-.+|+.+++++|.+.+ .++|.++|+|+||.++..++.++|+.++++|+.+|+++...++
T Consensus 77 ---~~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~ 150 (266)
T TIGR03101 77 ---ARWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVA 150 (266)
T ss_pred ---CCHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHH
Confidence 111123588999999998764 4789999999999999999999999999999999987732221
Q ss_pred --CCCCCCC---------Chhhhhc-cCCCCCHHHHHHHHhcCcccccCCCCCCeEEEecc-CCCCCCCChHHHHHHHHH
Q 004368 637 --LDPTIPL---------TTAEWEE-WGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAG-LNDPRVMYSEPAKFVAKL 703 (758)
Q Consensus 637 --~~~~~~~---------~~~~~~e-~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G-~~D~~V~~~~~~~~~~~L 703 (758)
+....+. ...+.-+ .|..-.++.-..|.+.+...-+.. .. .+|++.- ..+..-......++++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 228 (266)
T TIGR03101 151 RRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK-NC-PVHWFEVRPEEGATLSPVFSRLGEQW 228 (266)
T ss_pred HhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC-CC-ceEEEEeccccCCCCCHHHHHHHHHH
Confidence 1100000 0000011 133334444445554433222222 22 3566544 333334555778999999
Q ss_pred HhcCCCCceEEEE
Q 004368 704 REMKTDDNILLFK 716 (758)
Q Consensus 704 ~~~~~~~~~~~~~ 716 (758)
++.|+.++...++
T Consensus 229 ~~~g~~v~~~~~~ 241 (266)
T TIGR03101 229 VQSGVEVTVDLVP 241 (266)
T ss_pred HHcCCeEeeeecC
Confidence 9999988877776
No 88
>PLN02965 Probable pheophorbidase
Probab=99.32 E-value=7e-11 Score=121.72 Aligned_cols=198 Identities=15% Similarity=0.134 Sum_probs=118.5
Q ss_pred EEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC-Cc
Q 004368 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK-EK 596 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~~ 596 (758)
+||++||.... ...|...+..|.++||.|+.+|+||+|.+... .....+++++.+-+..+++. .+. ++
T Consensus 5 ~vvllHG~~~~--~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHG--AWCWYKLATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDHK 73 (255)
T ss_pred EEEEECCCCCC--cCcHHHHHHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCCC
Confidence 58999996543 33466666777788999999999999976421 11123456666555544443 122 58
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCcc---ch-----hhccCCC-------------CCCC----Chhhh-hc
Q 004368 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV---DV-----LTTMLDP-------------TIPL----TTAEW-EE 650 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~---d~-----~~~~~~~-------------~~~~----~~~~~-~e 650 (758)
+.++|+|+||.++..++.++|++++++|+.++.. +. ....... ..+. ....+ ..
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRH 153 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHH
Confidence 9999999999999999999999999888776541 10 0000000 0000 00000 00
Q ss_pred --cCCCCCHHHHHHH-HhcCc--c----------cccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEE
Q 004368 651 --WGDPWKEEFYFYM-KSYSP--V----------DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 715 (758)
Q Consensus 651 --~g~p~~~~~~~~l-~~~sp--~----------~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 715 (758)
+... ..+.+... ....+ . ....+++.| +|+++|++|..||+..++.+++.+.. .+.+.+
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP-~lvi~g~~D~~~~~~~~~~~~~~~~~----a~~~~i 227 (255)
T PLN02965 154 YYYNQS-PLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVP-RVYIKTAKDNLFDPVRQDVMVENWPP----AQTYVL 227 (255)
T ss_pred HHhcCC-CHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCC-EEEEEcCCCCCCCHHHHHHHHHhCCc----ceEEEe
Confidence 1111 11111110 00000 0 122346888 99999999999999888777766543 345666
Q ss_pred EecCCCCCCCCCChHHHHHH
Q 004368 716 KCELGAGHFSKSGRFERLRE 735 (758)
Q Consensus 716 ~~~~~~gH~~~~~~~~~~~~ 735 (758)
+ ++||.....+.+.+..
T Consensus 228 ~---~~GH~~~~e~p~~v~~ 244 (255)
T PLN02965 228 E---DSDHSAFFSVPTTLFQ 244 (255)
T ss_pred c---CCCCchhhcCHHHHHH
Confidence 5 8999876665555544
No 89
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.32 E-value=3e-11 Score=124.38 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=116.7
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
...|.||++||.++... .|......| ..+|.|+.+|.||+|+..... ..++.+..+-+..+++. ..
T Consensus 14 ~~~~~iv~lhG~~~~~~--~~~~~~~~l-~~~~~vi~~D~~G~G~s~~~~---------~~~~~~~~~d~~~~l~~--l~ 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLD--NLGVLARDL-VNDHDIIQVDMRNHGLSPRDP---------VMNYPAMAQDLLDTLDA--LQ 79 (255)
T ss_pred CCCCCEEEECCCCCchh--HHHHHHHHH-hhCCeEEEECCCCCCCCCCCC---------CCCHHHHHHHHHHHHHH--cC
Confidence 45689999999766543 344444444 468999999999998764310 12334433333222222 23
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcC--Cccchh----------hccCCCCCCC------------Chhhhh
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV--PFVDVL----------TTMLDPTIPL------------TTAEWE 649 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~--~~~d~~----------~~~~~~~~~~------------~~~~~~ 649 (758)
.+++.++|+|+||.++..++.++|++++++|+.. |..... .......... ......
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHhcCCHHHH
Confidence 4679999999999999999999999999988753 221100 0000000000 000000
Q ss_pred -----ccCCC----CCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCC
Q 004368 650 -----EWGDP----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 720 (758)
Q Consensus 650 -----e~g~p----~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 720 (758)
.+... ..+..+........+..+.++++| +|+++|++|+.|+...++.+.+.+ ...++++++ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~~~~----~~~~~~~~~---~ 231 (255)
T PRK10673 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHP-ALFIRGGNSPYVTEAYRDDLLAQF----PQARAHVIA---G 231 (255)
T ss_pred HHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCC-eEEEECCCCCCCCHHHHHHHHHhC----CCcEEEEeC---C
Confidence 00000 001111111122223344556788 999999999999976666665543 234566665 9
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHH
Q 004368 721 AGHFSKSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 721 ~gH~~~~~~~~~~~~~~~~~~fl~~ 745 (758)
+||.......+.+.+. +..||.+
T Consensus 232 ~gH~~~~~~p~~~~~~--l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAEKPDAVLRA--IRRYLND 254 (255)
T ss_pred CCCeeeccCHHHHHHH--HHHHHhc
Confidence 9998655444433332 4567653
No 90
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.31 E-value=4.9e-11 Score=121.31 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=74.5
Q ss_pred CEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHH-HHHHHHcCCCCCC
Q 004368 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKE 595 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 595 (758)
|+||++||..+... .|......|. +||.|+.+|.||.|+.... ......++++.... +..+.+. .+.+
T Consensus 2 ~~vv~~hG~~~~~~--~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSGA--DWQALIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGIE 70 (251)
T ss_pred CEEEEEcCCCCchh--hHHHHHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCCC
Confidence 78999999654433 3555556666 8999999999998876321 11122345555544 4544443 2457
Q ss_pred cEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCcc
Q 004368 596 KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~ 630 (758)
++.++|+|+||.++..++.++|+.++++++.++..
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCC
Confidence 89999999999999999999999999999887654
No 91
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.31 E-value=6e-11 Score=125.11 Aligned_cols=102 Identities=13% Similarity=0.087 Sum_probs=73.8
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (758)
..|.||++||.++... .|...+..|.+++ .|+.+|.||.|.+...- ...++++..+.+..++++- ..
T Consensus 26 ~g~~vvllHG~~~~~~--~w~~~~~~L~~~~-~via~D~~G~G~S~~~~--------~~~~~~~~a~dl~~ll~~l--~~ 92 (295)
T PRK03592 26 EGDPIVFLHGNPTSSY--LWRNIIPHLAGLG-RCLAPDLIGMGASDKPD--------IDYTFADHARYLDAWFDAL--GL 92 (295)
T ss_pred CCCEEEEECCCCCCHH--HHHHHHHHHhhCC-EEEEEcCCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHh--CC
Confidence 3478999999765443 3555666777775 99999999999764321 1123455544444444432 23
Q ss_pred CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
+++.++|+|+||.++..++.++|++++++|+.+++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 78999999999999999999999999999988763
No 92
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.31 E-value=4.8e-11 Score=129.19 Aligned_cols=212 Identities=17% Similarity=0.225 Sum_probs=121.8
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
.|.||++||..+.. ..|...+..|. .+|.|+.+|+||.|..... .....+++++.+.+..+++. ...+
T Consensus 88 gp~lvllHG~~~~~--~~w~~~~~~L~-~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~~l~~~l~~--l~~~ 155 (360)
T PLN02679 88 GPPVLLVHGFGASI--PHWRRNIGVLA-KNYTVYAIDLLGFGASDKP-------PGFSYTMETWAELILDFLEE--VVQK 155 (360)
T ss_pred CCeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCC-------CCccccHHHHHHHHHHHHHH--hcCC
Confidence 37899999965432 23555555554 5899999999999876421 00122345555544333332 1237
Q ss_pred cEEEEEeChhHHHHHHHHh-hCCCceeEEEEcCCccchhhc------c---CCCC---------CCC-C---------hh
Q 004368 596 KLCIEGRSAGGLLIGAVLN-MRPDLFKAAVAAVPFVDVLTT------M---LDPT---------IPL-T---------TA 646 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~-~~p~~f~a~v~~~~~~d~~~~------~---~~~~---------~~~-~---------~~ 646 (758)
++.++|+|+||+++..++. ++|++++++|+.++....... . .... .+. . ..
T Consensus 156 ~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PLN02679 156 PTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRD 235 (360)
T ss_pred CeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHH
Confidence 8999999999999887776 479999999987753211000 0 0000 000 0 00
Q ss_pred hh-----hccCCCC--CHHH----------------HHHHHh----cCcccccCCCCCCeEEEeccCCCCCCCChHH-HH
Q 004368 647 EW-----EEWGDPW--KEEF----------------YFYMKS----YSPVDNVKAQNYPHILVTAGLNDPRVMYSEP-AK 698 (758)
Q Consensus 647 ~~-----~e~g~p~--~~~~----------------~~~l~~----~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~-~~ 698 (758)
.. .-++++. .++. +..+.. .+....+.++++| +||++|++|..+|+..+ .+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-tLii~G~~D~~~p~~~~~~~ 314 (360)
T PLN02679 236 NLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLP-ILVLWGDQDPFTPLDGPVGK 314 (360)
T ss_pred HHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCC-EEEEEeCCCCCcCchhhHHH
Confidence 00 0011110 1111 111111 1112345567888 99999999999998753 34
Q ss_pred HHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 004368 699 FVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 699 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 745 (758)
++++|.+.-.+.++++++ ++||.......+.+.+. +.+||.+
T Consensus 315 ~~~~l~~~ip~~~l~~i~---~aGH~~~~E~Pe~~~~~--I~~FL~~ 356 (360)
T PLN02679 315 YFSSLPSQLPNVTLYVLE---GVGHCPHDDRPDLVHEK--LLPWLAQ 356 (360)
T ss_pred HHHhhhccCCceEEEEcC---CCCCCccccCHHHHHHH--HHHHHHh
Confidence 555665544455666776 99998766666655543 5678764
No 93
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.30 E-value=1.4e-10 Score=121.28 Aligned_cols=198 Identities=21% Similarity=0.230 Sum_probs=132.0
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccc--cCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhH
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 563 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~--~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 563 (758)
-++..++..||..+-..++.+.+... ..+..|+||++||-.|.+....-........++||.+++.|.||.++.--.-
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtT 172 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTT 172 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCC
Confidence 35666777898889888776655311 1256799999999777766532233334556689999999999976532111
Q ss_pred HhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCC---CceeEEEEcCCccchh--h-cc-
Q 004368 564 YENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVDVL--T-TM- 636 (758)
Q Consensus 564 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~~~~d~~--~-~~- 636 (758)
. .......-+|+.++++++.++.- ..++.++|.|+||.+....+.+.. .+.+|+++.+|+ |.+ . .+
T Consensus 173 p----r~f~ag~t~Dl~~~v~~i~~~~P--~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~~~~~~~~ 245 (409)
T KOG1838|consen 173 P----RLFTAGWTEDLREVVNHIKKRYP--QAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLLAASRSIE 245 (409)
T ss_pred C----ceeecCCHHHHHHHHHHHHHhCC--CCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc-hhhhhhhHHh
Confidence 0 11112234899999999988753 247999999999999988888753 366777777776 321 0 00
Q ss_pred -----------CCCCCC-----------------------CChhhhh------ccCCCCCHHHHHHHHhcCcccccCCCC
Q 004368 637 -----------LDPTIP-----------------------LTTAEWE------EWGDPWKEEFYFYMKSYSPVDNVKAQN 676 (758)
Q Consensus 637 -----------~~~~~~-----------------------~~~~~~~------e~g~p~~~~~~~~l~~~sp~~~i~~~~ 676 (758)
+...+. .+..+++ .+|-+...+ |.++.|+...+++++
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~de---YY~~aSs~~~v~~I~ 322 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDE---YYKKASSSNYVDKIK 322 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHH---HHhhcchhhhccccc
Confidence 000000 1112222 245554333 457889999999999
Q ss_pred CCeEEEeccCCCCCCCCh
Q 004368 677 YPHILVTAGLNDPRVMYS 694 (758)
Q Consensus 677 ~P~~Li~~G~~D~~V~~~ 694 (758)
.| +|++++.+|+.||..
T Consensus 323 VP-~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 323 VP-LLCINAADDPVVPEE 339 (409)
T ss_pred cc-EEEEecCCCCCCCcc
Confidence 99 999999999999863
No 94
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.30 E-value=2.4e-11 Score=123.45 Aligned_cols=193 Identities=16% Similarity=0.110 Sum_probs=112.9
Q ss_pred CEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCc
Q 004368 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 596 (758)
|.||++||..+. ...|......| ..+|.|+.+|+||.|..... ...+++++ ++.+.+.. .++
T Consensus 5 ~~iv~~HG~~~~--~~~~~~~~~~l-~~~~~vi~~d~~G~G~s~~~---------~~~~~~~~---~~~~~~~~---~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMN--AEVFRCLDEEL-SAHFTLHLVDLPGHGRSRGF---------GPLSLADA---AEAIAAQA---PDP 66 (245)
T ss_pred ceEEEEcCCCCc--hhhHHHHHHhh-ccCeEEEEecCCcCccCCCC---------CCcCHHHH---HHHHHHhC---CCC
Confidence 789999995332 23354444444 45799999999998875321 11234444 44444332 368
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh--ccC---------------CCCCCCChhhh---hccCCCCC
Q 004368 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT--TML---------------DPTIPLTTAEW---EEWGDPWK 656 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~--~~~---------------~~~~~~~~~~~---~e~g~p~~ 656 (758)
+.++|+|+||+++..++.++|++++++|+.++...+.. .+. ..........+ ...+.+..
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTA 146 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999887655321110 000 00000000000 00111110
Q ss_pred H----------------------HHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEE
Q 004368 657 E----------------------EFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 714 (758)
Q Consensus 657 ~----------------------~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 714 (758)
. ..+..+...+....+.++++| +|+++|.+|..||+...+.+.+.+. +.+.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-vlii~g~~D~~~~~~~~~~~~~~~~----~~~~~~ 221 (245)
T TIGR01738 147 RQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVP-FLRLYGYLDGLVPAKVVPYLDKLAP----HSELYI 221 (245)
T ss_pred chHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCC-EEEEeecCCcccCHHHHHHHHHhCC----CCeEEE
Confidence 0 001111112222345677888 9999999999999888777766553 345666
Q ss_pred EEecCCCCCCCCCChHHHHHH
Q 004368 715 FKCELGAGHFSKSGRFERLRE 735 (758)
Q Consensus 715 ~~~~~~~gH~~~~~~~~~~~~ 735 (758)
++ ++||.......+.+.+
T Consensus 222 ~~---~~gH~~~~e~p~~~~~ 239 (245)
T TIGR01738 222 FA---KAAHAPFLSHAEAFCA 239 (245)
T ss_pred eC---CCCCCccccCHHHHHH
Confidence 75 8999876555554444
No 95
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.28 E-value=2.4e-10 Score=125.20 Aligned_cols=107 Identities=18% Similarity=0.133 Sum_probs=69.6
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHH-HHHHHcCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACA-EYLIKNCYC 592 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~ 592 (758)
+..|+||++||..+.. ..|...+..|. ++|.|+.+|+||.|.....-.. ........+.+++.+ +++...
T Consensus 103 ~~~p~vvllHG~~~~~--~~~~~~~~~L~-~~~~vi~~D~rG~G~S~~~~~~---~~~~~~~~~~~~~~i~~~~~~l--- 173 (402)
T PLN02894 103 EDAPTLVMVHGYGASQ--GFFFRNFDALA-SRFRVIAIDQLGWGGSSRPDFT---CKSTEETEAWFIDSFEEWRKAK--- 173 (402)
T ss_pred CCCCEEEEECCCCcch--hHHHHHHHHHH-hCCEEEEECCCCCCCCCCCCcc---cccHHHHHHHHHHHHHHHHHHc---
Confidence 3568999999954422 22334444554 4699999999999876432100 000001112233333 344333
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
+.+++.++|||+||++++.++.++|+.++++|+.+|.
T Consensus 174 ~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 174 NLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 3468999999999999999999999999998888664
No 96
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.27 E-value=1.1e-10 Score=128.61 Aligned_cols=124 Identities=13% Similarity=0.120 Sum_probs=81.4
Q ss_pred eeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChH-HHHHH---HcCcEEEEEecCCCCCCchhHHhc
Q 004368 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSS-RLSLL---DRGFIFAIAQIRGGGELGRQWYEN 566 (758)
Q Consensus 491 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~---~~G~~v~~~~~RG~g~~G~~~~~~ 566 (758)
|.+..|.+++...--|++. ...|.||++||..+... .|... +..|. .+||.|+.+|+||+|.....
T Consensus 180 ~~~~~~~~l~~~~~gp~~~----~~k~~VVLlHG~~~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p---- 249 (481)
T PLN03087 180 WLSSSNESLFVHVQQPKDN----KAKEDVLFIHGFISSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP---- 249 (481)
T ss_pred eEeeCCeEEEEEEecCCCC----CCCCeEEEECCCCccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC----
Confidence 3334456666654444432 22478999999654432 23322 23333 47999999999999876431
Q ss_pred ccccCCcChHhHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 567 GKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
.....++++..+.+. .+++.- ..+++.++|+|+||+++..++.++|++++++|+.+|.
T Consensus 250 ---~~~~ytl~~~a~~l~~~ll~~l--g~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~ 308 (481)
T PLN03087 250 ---ADSLYTLREHLEMIERSVLERY--KVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPP 308 (481)
T ss_pred ---CCCcCCHHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCC
Confidence 111234566666553 444432 3478999999999999999999999999999988754
No 97
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.27 E-value=7.5e-11 Score=128.75 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=75.8
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
+..|.||++||..+... .|...... +.++|.|+.+|+||+|..... ....++.++.+.+..++++ .+
T Consensus 129 ~~~~~vl~~HG~~~~~~--~~~~~~~~-l~~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~ 195 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN--NWLFNHAA-LAAGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LG 195 (371)
T ss_pred CCCCeEEEECCCCCccc--hHHHHHHH-HhcCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cC
Confidence 34588999998544332 23333344 445799999999999976421 1234567777777766654 45
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
+.++.++|+|+||+++..++.++|++++++|+.+|.
T Consensus 196 ~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 196 IERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred CccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 678999999999999999999999999999988765
No 98
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.26 E-value=1.1e-10 Score=126.25 Aligned_cols=112 Identities=14% Similarity=0.092 Sum_probs=75.4
Q ss_pred CCEEEEecCCCccCCCC---------CCChHH---HHHHHcCcEEEEEecCC--CCCCch-hHHhcccc---cCCcChHh
Q 004368 516 DPLLLYGYGSYEICNDP---------AFNSSR---LSLLDRGFIFAIAQIRG--GGELGR-QWYENGKF---LKKKNTFT 577 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~---------~~~~~~---~~l~~~G~~v~~~~~RG--~g~~G~-~~~~~~~~---~~~~~~~~ 577 (758)
.|.||++||-.+..... .|...+ ..|..++|.|+.+|+|| +|..+. ++...+.. .....+++
T Consensus 31 ~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~ 110 (351)
T TIGR01392 31 SNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIR 110 (351)
T ss_pred CCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHH
Confidence 47899999955533111 122222 25667899999999999 454442 22211211 11135678
Q ss_pred HHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 578 DFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 578 D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
|+.+.+..++++- .-++ +.++|+|+||.++..++.++|++++++|+.++.
T Consensus 111 ~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 161 (351)
T TIGR01392 111 DDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATS 161 (351)
T ss_pred HHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccC
Confidence 8887776665543 2367 999999999999999999999999988887664
No 99
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.26 E-value=1.3e-10 Score=125.42 Aligned_cols=109 Identities=20% Similarity=0.199 Sum_probs=76.5
Q ss_pred CCCEEEEecCCCccC---CCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCC
Q 004368 515 SDPLLLYGYGSYEIC---NDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~---~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (758)
+.| ||++||-.... ........+..|+++||.|+++|+||+|.....+ .......+|+.++++++.++.
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~------~~~d~~~~~~~~~v~~l~~~~- 133 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL------TLDDYINGYIDKCVDYICRTS- 133 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC------CHHHHHHHHHHHHHHHHHHHh-
Confidence 345 77788732211 1112345677899999999999999876432111 000011145778899988764
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccch
Q 004368 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV 632 (758)
Q Consensus 592 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~ 632 (758)
..+++.++|+|+||.+++.++..+|+.++++|+.++.+|.
T Consensus 134 -~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 134 -KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDF 173 (350)
T ss_pred -CCCcccEEEECHHHHHHHHHHHhCchheeeEEEecccccc
Confidence 3478999999999999999999999999999999888774
No 100
>PRK06489 hypothetical protein; Provisional
Probab=99.26 E-value=1.2e-10 Score=126.41 Aligned_cols=216 Identities=15% Similarity=0.194 Sum_probs=120.7
Q ss_pred CCEEEEecCCCccCCCCCCChHHH-------HHHHcCcEEEEEecCCCCCCchhHHhccc-ccCCcChHhHHHHHH-HHH
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRL-------SLLDRGFIFAIAQIRGGGELGRQWYENGK-FLKKKNTFTDFIACA-EYL 586 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~-------~l~~~G~~v~~~~~RG~g~~G~~~~~~~~-~~~~~~~~~D~~~~~-~~l 586 (758)
.|.||++||..+....+.-..... .+..++|.|+.+|+||+|..... .... ......+++|+.+.+ +.+
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p--~~~~~~~~~~~~~~~~a~~~~~~l 146 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKP--SDGLRAAFPRYDYDDMVEAQYRLV 146 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCC--CcCCCCCCCcccHHHHHHHHHHHH
Confidence 588999999766543321011111 22367899999999999865321 0000 000124567776543 334
Q ss_pred HHcCCCCCCcEE-EEEeChhHHHHHHHHhhCCCceeEEEEcCCccc------h-hhc-----cC-CC-----CCCCCh--
Q 004368 587 IKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD------V-LTT-----ML-DP-----TIPLTT-- 645 (758)
Q Consensus 587 ~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d------~-~~~-----~~-~~-----~~~~~~-- 645 (758)
.++- +-+++. ++|+|+||++++.++.++|++++++|+.++... . ... .. .. ......
T Consensus 147 ~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (360)
T PRK06489 147 TEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPS 224 (360)
T ss_pred HHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHH
Confidence 4432 235664 899999999999999999999999998765320 0 000 00 00 000000
Q ss_pred -h----hhh--------cc--CCCC------------------CHHHH----HHHHhcCcccccCCCCCCeEEEeccCCC
Q 004368 646 -A----EWE--------EW--GDPW------------------KEEFY----FYMKSYSPVDNVKAQNYPHILVTAGLND 688 (758)
Q Consensus 646 -~----~~~--------e~--g~p~------------------~~~~~----~~l~~~sp~~~i~~~~~P~~Li~~G~~D 688 (758)
. .+. .+ ..+. +...+ .....++....+.++++| +||++|++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L~~I~~P-vLvI~G~~D 303 (360)
T PRK06489 225 LKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDLEKIKAP-VLAINSADD 303 (360)
T ss_pred HHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHHHhCCCC-EEEEecCCC
Confidence 0 000 00 0010 11111 001122233445677898 999999999
Q ss_pred CCCCChHH--HHHHHHHHhcCCCCceEEEEecCCC----CCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 689 PRVMYSEP--AKFVAKLREMKTDDNILLFKCELGA----GHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 689 ~~V~~~~~--~~~~~~L~~~~~~~~~~~~~~~~~~----gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
..+|+..+ +++++.+. ..++++++ ++ ||... ...+.+.+. +.+||.+.
T Consensus 304 ~~~p~~~~~~~~la~~ip----~a~l~~i~---~a~~~~GH~~~-e~P~~~~~~--i~~FL~~~ 357 (360)
T PRK06489 304 ERNPPETGVMEAALKRVK----HGRLVLIP---ASPETRGHGTT-GSAKFWKAY--LAEFLAQV 357 (360)
T ss_pred cccChhhHHHHHHHHhCc----CCeEEEEC---CCCCCCCcccc-cCHHHHHHH--HHHHHHhc
Confidence 99998865 55655543 34577776 54 99875 455555554 56787654
No 101
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.25 E-value=1.2e-10 Score=107.49 Aligned_cols=176 Identities=19% Similarity=0.227 Sum_probs=113.6
Q ss_pred CCCCEEEEecCCC--ccCC-CCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcC
Q 004368 514 GSDPLLLYGYGSY--EICN-DPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (758)
Q Consensus 514 ~~~P~vl~~hGg~--~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (758)
...|+.|.+|--+ +.++ ..--...+..|.++||+++-+|+||-|.++.+ ..++..+.+|..+|++||.++.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~------fD~GiGE~~Da~aaldW~~~~h 99 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGE------FDNGIGELEDAAAALDWLQARH 99 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCc------ccCCcchHHHHHHHHHHHHhhC
Confidence 4567777776432 2222 11112234578889999999999998877654 4566777899999999999885
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCccc
Q 004368 591 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVD 670 (758)
Q Consensus 591 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~ 670 (758)
- +..-..+.|+|.|+++++.++.+.|+. ...++..|..+. + .+..
T Consensus 100 p-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--~-----------------------dfs~-------- 144 (210)
T COG2945 100 P-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--Y-----------------------DFSF-------- 144 (210)
T ss_pred C-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCc--h-----------------------hhhh--------
Confidence 3 333357899999999999999998763 223333333220 0 0101
Q ss_pred ccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 004368 671 NVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 743 (758)
Q Consensus 671 ~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 743 (758)
+.....| .|+++|+.|++|.+....++++- .+.+.+..+ +++|++.... ..+... +.+||
T Consensus 145 -l~P~P~~-~lvi~g~~Ddvv~l~~~l~~~~~-----~~~~~i~i~---~a~HFF~gKl-~~l~~~--i~~~l 204 (210)
T COG2945 145 -LAPCPSP-GLVIQGDADDVVDLVAVLKWQES-----IKITVITIP---GADHFFHGKL-IELRDT--IADFL 204 (210)
T ss_pred -ccCCCCC-ceeEecChhhhhcHHHHHHhhcC-----CCCceEEec---CCCceecccH-HHHHHH--HHHHh
Confidence 1111244 99999999999888777776554 344455555 9999875433 223322 45676
No 102
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.25 E-value=2.3e-10 Score=118.84 Aligned_cols=107 Identities=17% Similarity=0.193 Sum_probs=76.8
Q ss_pred CCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
++..|.||++||..... ..|......|.++||.|+.+|+||+|..... .....++++..+.+..++++-.
T Consensus 15 ~~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-------~~~~~~~~~~~~~l~~~i~~l~- 84 (273)
T PLN02211 15 NRQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-------ADSVTTFDEYNKPLIDFLSSLP- 84 (273)
T ss_pred cCCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-------cccCCCHHHHHHHHHHHHHhcC-
Confidence 35578999999965433 3466666777788999999999998853210 1112455666555544443311
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
..+++.++||||||+++..++.++|++++++|..++.
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 2378999999999999999999999999999988664
No 103
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.25 E-value=4.6e-12 Score=126.83 Aligned_cols=188 Identities=20% Similarity=0.270 Sum_probs=113.6
Q ss_pred EEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEE
Q 004368 519 LLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLC 598 (758)
Q Consensus 519 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~ 598 (758)
||++||..+.. ..|......| ++||.|+.+|.||.|.....- .....++++..+.+..++++- ..+++.
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~l~~~l~~~--~~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPP------DYSPYSIEDYAEDLAELLDAL--GIKKVI 69 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHS------SGSGGSHHHHHHHHHHHHHHT--TTSSEE
T ss_pred eEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEecCCcccccccc------ccCCcchhhhhhhhhhccccc--cccccc
Confidence 68899965544 4466666666 589999999999988765321 012344555555555544442 227899
Q ss_pred EEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc--------CCCCCC--------CChhhhhccCCCC-CH----
Q 004368 599 IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM--------LDPTIP--------LTTAEWEEWGDPW-KE---- 657 (758)
Q Consensus 599 i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~--------~~~~~~--------~~~~~~~e~g~p~-~~---- 657 (758)
++|+|+||.++..++.++|++++++|+.+|........ ...-.. +....+..+-... ..
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999887532210 000000 0000000000000 00
Q ss_pred ----HHHHHH----HhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 658 ----EFYFYM----KSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 658 ----~~~~~l----~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
...+.+ ...++...+.+++.| +++++|++|..++.....++.+.+ ...+++.++ ++||..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-vl~i~g~~D~~~~~~~~~~~~~~~----~~~~~~~~~---~~gH~~ 217 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPRIKVP-VLVIHGEDDPIVPPESAEELADKL----PNAELVVIP---GAGHFL 217 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGSSSE-EEEEEETTSSSSHHHHHHHHHHHS----TTEEEEEET---TSSSTH
T ss_pred ccccccccccccccccccccccccccCCC-eEEeecCCCCCCCHHHHHHHHHHC----CCCEEEEEC---CCCCcc
Confidence 001111 112333455666787 999999999999955555555443 345666665 899974
No 104
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.24 E-value=1.2e-10 Score=122.16 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=74.4
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (758)
+.|.||++||.... ...|.... ..+.++|.|+.+|.||.|..+.. .....+++++.+.+..++++- +.
T Consensus 33 ~~~~iv~lHG~~~~--~~~~~~~~-~~l~~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~~~~~--~~ 100 (286)
T PRK03204 33 TGPPILLCHGNPTW--SFLYRDII-VALRDRFRCVAPDYLGFGLSERP-------SGFGYQIDEHARVIGEFVDHL--GL 100 (286)
T ss_pred CCCEEEEECCCCcc--HHHHHHHH-HHHhCCcEEEEECCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHh--CC
Confidence 34789999996532 22243333 33456799999999999876431 011234678888887777653 34
Q ss_pred CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
+++.++|+|+||.++..++..+|++++++|+.++.
T Consensus 101 ~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 101 DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred CCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 78999999999999999999999999999876653
No 105
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.22 E-value=1.4e-10 Score=119.46 Aligned_cols=194 Identities=14% Similarity=0.090 Sum_probs=114.9
Q ss_pred CEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCc
Q 004368 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 596 (758)
|.||++||..+.. ..|......|. ..|.|+.+|.||.|.... ....+++++.. .+.+. ..++
T Consensus 14 ~~ivllHG~~~~~--~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~---------~~~~~~~~~~~---~l~~~---~~~~ 75 (256)
T PRK10349 14 VHLVLLHGWGLNA--EVWRCIDEELS-SHFTLHLVDLPGFGRSRG---------FGALSLADMAE---AVLQQ---APDK 75 (256)
T ss_pred CeEEEECCCCCCh--hHHHHHHHHHh-cCCEEEEecCCCCCCCCC---------CCCCCHHHHHH---HHHhc---CCCC
Confidence 5699999954333 34555455554 569999999999986532 11133444443 44443 2478
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc----C------------CCCCCCChhhhh---ccCCCC-C
Q 004368 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM----L------------DPTIPLTTAEWE---EWGDPW-K 656 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~----~------------~~~~~~~~~~~~---e~g~p~-~ 656 (758)
+.++|+|+||+++..++.++|++++.+|+..+..-..... . ..........+. .++.+. .
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETAR 155 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHH
Confidence 9999999999999999999999999998765531110000 0 000000000000 011110 0
Q ss_pred -----------------HH----HHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEE
Q 004368 657 -----------------EE----FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLF 715 (758)
Q Consensus 657 -----------------~~----~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 715 (758)
.. ....+...+....+.++++| +|+++|++|..+|...+..+.+.+. ..+++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P-~lii~G~~D~~~~~~~~~~~~~~i~----~~~~~~i 230 (256)
T PRK10349 156 QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMP-FLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIF 230 (256)
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCC-eEEEecCCCccCCHHHHHHHHHhCC----CCeEEEe
Confidence 00 01112223333455667898 9999999999998877665555443 3467777
Q ss_pred EecCCCCCCCCCChHHHHHHH
Q 004368 716 KCELGAGHFSKSGRFERLREA 736 (758)
Q Consensus 716 ~~~~~~gH~~~~~~~~~~~~~ 736 (758)
+ ++||.......+.+.+.
T Consensus 231 ~---~~gH~~~~e~p~~f~~~ 248 (256)
T PRK10349 231 A---KAAHAPFISHPAEFCHL 248 (256)
T ss_pred C---CCCCCccccCHHHHHHH
Confidence 6 99998776666655543
No 106
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.21 E-value=3.2e-10 Score=117.96 Aligned_cols=201 Identities=20% Similarity=0.271 Sum_probs=125.2
Q ss_pred HHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHH-cCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 537 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 537 ~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
.+..|+++||+|+++||-|-|. .|.. + ......+-|.+.|++.+.. .+.....+++++|+|.||..+++++..
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~---~y~~-~--~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l 91 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGT---PYLN-G--RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAEL 91 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCC---cccC-c--HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHH
Confidence 3468899999999999998765 2221 1 1112344566666665554 354456899999999999998887754
Q ss_pred ----CCCc---eeEEEEcCCccchhhccCCCCC-CCC----------hhhhh----------------------------
Q 004368 616 ----RPDL---FKAAVAAVPFVDVLTTMLDPTI-PLT----------TAEWE---------------------------- 649 (758)
Q Consensus 616 ----~p~~---f~a~v~~~~~~d~~~~~~~~~~-~~~----------~~~~~---------------------------- 649 (758)
.||+ +.++++..|..|+..++..-+- +.. ...|.
T Consensus 92 ~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~ 171 (290)
T PF03583_consen 92 APSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLAD 171 (290)
T ss_pred hHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHH
Confidence 4676 7899999998886554321000 000 00000
Q ss_pred --------cc--C-----CC-----CCHHHHHHHHhcCc-ccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcC-
Q 004368 650 --------EW--G-----DP-----WKEEFYFYMKSYSP-VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMK- 707 (758)
Q Consensus 650 --------e~--g-----~p-----~~~~~~~~l~~~sp-~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~- 707 (758)
.+ + .+ .++...+.+.+.+. +..-..-+.| |+|.||.+|..||+..+.++++++++.|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~P-v~i~~g~~D~vvP~~~~~~l~~~~c~~G~ 250 (290)
T PF03583_consen 172 IVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVP-VLIYQGTADEVVPPADTDALVAKWCAAGG 250 (290)
T ss_pred HHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCC-EEEEecCCCCCCChHHHHHHHHHHHHcCC
Confidence 00 0 00 11222233333322 1001112566 9999999999999999999999999999
Q ss_pred CCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCCCCC
Q 004368 708 TDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSMLPS 752 (758)
Q Consensus 708 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 752 (758)
.++++..++ ..+|... ......+.++||..+|...+.
T Consensus 251 a~V~~~~~~---~~~H~~~-----~~~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 251 ADVEYVRYP---GGGHLGA-----AFASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred CCEEEEecC---CCChhhh-----hhcCcHHHHHHHHHHHCCCCC
Confidence 677655554 7889532 122234467999999976654
No 107
>PRK07581 hypothetical protein; Validated
Probab=99.20 E-value=1.5e-10 Score=124.73 Aligned_cols=109 Identities=17% Similarity=0.074 Sum_probs=67.6
Q ss_pred CCCEEEEecCCCccCCCCCCChHH---HHHHHcCcEEEEEecCCCCCCchhHHhccc---ccCCcChH-hHHHHHHHHHH
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSR---LSLLDRGFIFAIAQIRGGGELGRQWYENGK---FLKKKNTF-TDFIACAEYLI 587 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~---~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~---~~~~~~~~-~D~~~~~~~l~ 587 (758)
..|+||+.||..+.... +.... ..|...+|.|+.+|.||+|.+......... ......++ +|+.+....|.
T Consensus 40 ~~~~vll~~~~~~~~~~--~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQD--NEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCccc--chhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 34777777765443322 22111 245567999999999999976432110000 00001112 44444344455
Q ss_pred H-cCCCCCCcE-EEEEeChhHHHHHHHHhhCCCceeEEEEcCC
Q 004368 588 K-NCYCTKEKL-CIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (758)
Q Consensus 588 ~-~~~~d~~~i-~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 628 (758)
+ .+. +++ .++|+|+||+++..++.++|++++++|+.++
T Consensus 118 ~~lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~ 157 (339)
T PRK07581 118 EKFGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAG 157 (339)
T ss_pred HHhCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeec
Confidence 4 343 684 7899999999999999999999999887754
No 108
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.20 E-value=5.8e-11 Score=110.30 Aligned_cols=211 Identities=18% Similarity=0.229 Sum_probs=133.2
Q ss_pred eEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCC--hHHHHHH-HcCcEEEEEec--CCCCC----------Cch
Q 004368 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN--SSRLSLL-DRGFIFAIAQI--RGGGE----------LGR 561 (758)
Q Consensus 497 ~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~--~~~~~l~-~~G~~v~~~~~--RG~g~----------~G~ 561 (758)
..+..-++.|++. ..+++.|++.+.-|-.. ....|. .-+|..+ .+|.+|+.||- ||-.- .|.
T Consensus 26 c~Mtf~vylPp~a-~~~k~~P~lf~LSGLTC--T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-PRGKRCPVLFYLSGLTC--THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred cceEEEEecCCCc-ccCCcCceEEEecCCcc--cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 4455566778887 66777999999988433 333332 2234444 46999999984 55321 122
Q ss_pred hHHhcccccCCcChHhHHHHHHHHHHH-----cCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhcc
Q 004368 562 QWYENGKFLKKKNTFTDFIACAEYLIK-----NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTM 636 (758)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~-----~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~ 636 (758)
.|+-....+.-.+.+.-...+++.|.+ .-.+|+.+++|.||||||+-++....++|.+|+.+.+.+|+.+..+.
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~c- 181 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINC- 181 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccC-
Confidence 222221111111223333334444432 23579999999999999999998899999999999999999987643
Q ss_pred CCCCCCCChhhhhcc-CCCCCHHHHHHHHhcCcccccCCC---CCCeEEEeccCCCCCCC-ChHHHHHHHHHHhcCCCCc
Q 004368 637 LDPTIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQ---NYPHILVTAGLNDPRVM-YSEPAKFVAKLREMKTDDN 711 (758)
Q Consensus 637 ~~~~~~~~~~~~~e~-g~p~~~~~~~~l~~~sp~~~i~~~---~~P~~Li~~G~~D~~V~-~~~~~~~~~~L~~~~~~~~ 711 (758)
||....+.-| |+ ++..| .+|++-+-|++. .. -+||-.|.+|...+ ---++.+.++.++. ..-
T Consensus 182 -----pWGqKAf~gYLG~--~ka~W---~~yDat~lik~y~~~~~-~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~--~~~ 248 (283)
T KOG3101|consen 182 -----PWGQKAFTGYLGD--NKAQW---EAYDATHLIKNYRGVGD-DILIDQGAADNFLAEQLLPENLLEACKAT--WQA 248 (283)
T ss_pred -----cchHHHhhcccCC--ChHHH---hhcchHHHHHhcCCCCc-cEEEecCccchhhhhhcChHHHHHHhhcc--ccc
Confidence 6665555444 44 44443 567776555554 22 38999999998766 22244555554433 223
Q ss_pred eEEEEecCCCCCC
Q 004368 712 ILLFKCELGAGHF 724 (758)
Q Consensus 712 ~~~~~~~~~~gH~ 724 (758)
+++++..++-.|.
T Consensus 249 ~v~~r~~~gyDHS 261 (283)
T KOG3101|consen 249 PVVFRLQEGYDHS 261 (283)
T ss_pred cEEEEeecCCCcc
Confidence 5677777777785
No 109
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.20 E-value=3.1e-10 Score=123.73 Aligned_cols=224 Identities=16% Similarity=0.148 Sum_probs=129.7
Q ss_pred CCEEEEecCCCccCCCCC-----------CChHH---HHHHHcCcEEEEEecCCC-C-CCchhHHhc--ccc---cCCcC
Q 004368 516 DPLLLYGYGSYEICNDPA-----------FNSSR---LSLLDRGFIFAIAQIRGG-G-ELGRQWYEN--GKF---LKKKN 574 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~-----------~~~~~---~~l~~~G~~v~~~~~RG~-g-~~G~~~~~~--~~~---~~~~~ 574 (758)
.|.||++||..+...... |...+ ..+...+|.|+.+|++|+ + ..+...... +.. .....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 689999999665543211 22222 144467999999999983 2 223211100 000 01135
Q ss_pred hHhHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchh----------hccC--CCC-
Q 004368 575 TFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL----------TTML--DPT- 640 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~----------~~~~--~~~- 640 (758)
+++|+.+.+..+++.- .-++ +.++|+|+||.++..++.++|++++++|+.++..... .... +..
T Consensus 128 ~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 128 TIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 6788887777666552 2356 5899999999999999999999999998877543210 0000 000
Q ss_pred ----------CCC---------------Chhhh-hccCC------------------------------CCCHHHHH---
Q 004368 641 ----------IPL---------------TTAEW-EEWGD------------------------------PWKEEFYF--- 661 (758)
Q Consensus 641 ----------~~~---------------~~~~~-~e~g~------------------------------p~~~~~~~--- 661 (758)
.+. ....+ ..++. ..+++.+.
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 000 00000 00100 00111110
Q ss_pred -HHHhcC--------cccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHH
Q 004368 662 -YMKSYS--------PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFER 732 (758)
Q Consensus 662 -~l~~~s--------p~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~ 732 (758)
.+...+ -...++++++| +|+++|++|..+|+..++++++.+...+..++++.++ +++||.........
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~P-tLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~--~~~GH~~~le~p~~ 362 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKAR-FLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEID--SPYGHDAFLLDDPR 362 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCC-EEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeC--CCCCchhHhcCHHH
Confidence 111111 01234567888 9999999999999999999999998776555555553 37999876555555
Q ss_pred HHHHHHHHHHHHHh
Q 004368 733 LREAAFTYTFLMRA 746 (758)
Q Consensus 733 ~~~~~~~~~fl~~~ 746 (758)
+.+. +.+||.+.
T Consensus 363 ~~~~--L~~FL~~~ 374 (379)
T PRK00175 363 YGRL--VRAFLERA 374 (379)
T ss_pred HHHH--HHHHHHhh
Confidence 4443 56787653
No 110
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.15 E-value=2.2e-10 Score=106.19 Aligned_cols=198 Identities=20% Similarity=0.181 Sum_probs=133.6
Q ss_pred CCCCEEEEecCCCccCCCCCCChH-HHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSS-RLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
...|++|++||||+.......... ....+.+||.|+.++|--+.+ ...-..++.|+...++|+.+.- -
T Consensus 65 ~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q----------~htL~qt~~~~~~gv~filk~~-~ 133 (270)
T KOG4627|consen 65 NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ----------VHTLEQTMTQFTHGVNFILKYT-E 133 (270)
T ss_pred CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc----------cccHHHHHHHHHHHHHHHHHhc-c
Confidence 357999999999998766544433 357788999999998753332 1111356789999999987753 3
Q ss_pred CCCcEEEEEeChhHHHHHHHHhh-CCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCC--CHHHHHHHHhcCc-
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNM-RPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPW--KEEFYFYMKSYSP- 668 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~--~~~~~~~l~~~sp- 668 (758)
+.+.|.+.|||+|++|++.++++ +..+..++++.+|++|+..... .|+|+.- .. +..+..|+
T Consensus 134 n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~-----------te~g~dlgLt~---~~ae~~Scd 199 (270)
T KOG4627|consen 134 NTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSN-----------TESGNDLGLTE---RNAESVSCD 199 (270)
T ss_pred cceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhC-----------CccccccCccc---chhhhcCcc
Confidence 56789999999999998876664 4558899999999999654321 1233220 11 11233444
Q ss_pred ccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 669 VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 669 ~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
+...+.++.| +||+.+.+|.---++|.+.|++.++++. +.+++ +.+|.--. .+......+++.|+.+.
T Consensus 200 l~~~~~v~~~-ilVv~~~~espklieQnrdf~~q~~~a~----~~~f~---n~~hy~I~--~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 200 LWEYTDVTVW-ILVVAAEHESPKLIEQNRDFADQLRKAS----FTLFK---NYDHYDII--EETAIDDSDVSRFLRNI 267 (270)
T ss_pred HHHhcCceee-eeEeeecccCcHHHHhhhhHHHHhhhcc----eeecC---CcchhhHH--HHhccccchHHHHHHHH
Confidence 2334455777 9999999999888999999999998743 44565 88895311 11222334566676654
No 111
>PLN02578 hydrolase
Probab=99.15 E-value=1.2e-09 Score=118.06 Aligned_cols=96 Identities=13% Similarity=0.071 Sum_probs=65.8
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChH----hHHHHHHHHHHHcCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF----TDFIACAEYLIKNCY 591 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~----~D~~~~~~~l~~~~~ 591 (758)
.|.||++||..+.. ..|......| .++|.|+.+|+||.|.+..... ..+. +|+.+.++.+.
T Consensus 86 g~~vvliHG~~~~~--~~w~~~~~~l-~~~~~v~~~D~~G~G~S~~~~~--------~~~~~~~a~~l~~~i~~~~---- 150 (354)
T PLN02578 86 GLPIVLIHGFGASA--FHWRYNIPEL-AKKYKVYALDLLGFGWSDKALI--------EYDAMVWRDQVADFVKEVV---- 150 (354)
T ss_pred CCeEEEECCCCCCH--HHHHHHHHHH-hcCCEEEEECCCCCCCCCCccc--------ccCHHHHHHHHHHHHHHhc----
Confidence 35688999954432 2233333444 4679999999999987654311 1122 23443343332
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCC
Q 004368 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (758)
Q Consensus 592 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 628 (758)
.+++.++|+|+||+++..++.++|++++++|+.++
T Consensus 151 --~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~ 185 (354)
T PLN02578 151 --KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185 (354)
T ss_pred --cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECC
Confidence 36899999999999999999999999999987654
No 112
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.15 E-value=1e-09 Score=112.02 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=70.5
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
.|.||++||..+... .|......| .+|.|+.+|+||.|..... ...+++++.+-+..++++- ..+
T Consensus 2 ~p~vvllHG~~~~~~--~w~~~~~~l--~~~~vi~~D~~G~G~S~~~---------~~~~~~~~~~~l~~~l~~~--~~~ 66 (242)
T PRK11126 2 LPWLVFLHGLLGSGQ--DWQPVGEAL--PDYPRLYIDLPGHGGSAAI---------SVDGFADVSRLLSQTLQSY--NIL 66 (242)
T ss_pred CCEEEEECCCCCChH--HHHHHHHHc--CCCCEEEecCCCCCCCCCc---------cccCHHHHHHHHHHHHHHc--CCC
Confidence 378999999755443 455555555 4799999999999876431 0124555555554444432 347
Q ss_pred cEEEEEeChhHHHHHHHHhhCCC-ceeEEEEcCCc
Q 004368 596 KLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAAVPF 629 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~~~ 629 (758)
++.++|+|+||.+++.++.++|+ +++++++.++.
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~ 101 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGN 101 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCC
Confidence 99999999999999999999865 48888876644
No 113
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.13 E-value=5.1e-09 Score=106.08 Aligned_cols=100 Identities=20% Similarity=0.221 Sum_probs=73.3
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChH----hHHHHHHHHHHHc
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF----TDFIACAEYLIKN 589 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~----~D~~~~~~~l~~~ 589 (758)
+..|+|+++||-+....+ |......|+++||.|+++|.||-|..-..- ....-++ .|+++.++.|
T Consensus 42 ~~gP~illlHGfPe~wys--wr~q~~~la~~~~rviA~DlrGyG~Sd~P~------~~~~Yt~~~l~~di~~lld~L--- 110 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYS--WRHQIPGLASRGYRVIAPDLRGYGFSDAPP------HISEYTIDELVGDIVALLDHL--- 110 (322)
T ss_pred CCCCEEEEEccCCccchh--hhhhhhhhhhcceEEEecCCCCCCCCCCCC------CcceeeHHHHHHHHHHHHHHh---
Confidence 467999999997665443 444567899999999999999887643211 1111223 3444444444
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcC
Q 004368 590 CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV 627 (758)
Q Consensus 590 ~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 627 (758)
| -+|+.++||++|+.++..++..+|++..+.|+.+
T Consensus 111 g---~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~n 145 (322)
T KOG4178|consen 111 G---LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLN 145 (322)
T ss_pred c---cceeEEEeccchhHHHHHHHHhChhhcceEEEec
Confidence 3 3899999999999999999999999999888764
No 114
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.13 E-value=1e-09 Score=118.29 Aligned_cols=186 Identities=16% Similarity=0.089 Sum_probs=106.9
Q ss_pred HHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCc-EEEEEeChhHHHHHHHHhhCCC
Q 004368 540 SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK-LCIEGRSAGGLLIGAVLNMRPD 618 (758)
Q Consensus 540 ~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~p~ 618 (758)
.|...+|.|+.+|+||+|+... ....+.|+.+.+..+++.- +-++ +.++|+|+||+++..++.++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~----------~~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~vA~~~A~~~P~ 161 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLD----------VPIDTADQADAIALLLDAL--GIARLHAFVGYSYGALVGLQFASRHPA 161 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCC----------CCCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHHHHHHHHHChH
Confidence 3545689999999999875421 0122345544444444432 2245 5799999999999999999999
Q ss_pred ceeEEEEcCCccchh-------h---cc--CCCCC--C--------------C-Chhhh-hccCCCCC-------HHHH-
Q 004368 619 LFKAAVAAVPFVDVL-------T---TM--LDPTI--P--------------L-TTAEW-EEWGDPWK-------EEFY- 660 (758)
Q Consensus 619 ~f~a~v~~~~~~d~~-------~---~~--~~~~~--~--------------~-~~~~~-~e~g~p~~-------~~~~- 660 (758)
+++++|+.++..... . .. ..... . + ....+ ..+..... ....
T Consensus 162 ~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T PRK08775 162 RVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAED 241 (343)
T ss_pred hhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHH
Confidence 999999887643210 0 00 00000 0 0 00000 01111100 0000
Q ss_pred -------HHHHhcCc-------------ccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCC
Q 004368 661 -------FYMKSYSP-------------VDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 720 (758)
Q Consensus 661 -------~~l~~~sp-------------~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 720 (758)
......++ ...+.++++| +|+++|++|..+|+.+++++++++.. ..++++++ .+
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~P-tLvi~G~~D~~~p~~~~~~~~~~i~p---~a~l~~i~--~~ 315 (343)
T PRK08775 242 YLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVP-TVVVAVEGDRLVPLADLVELAEGLGP---RGSLRVLR--SP 315 (343)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCC-eEEEEeCCCEeeCHHHHHHHHHHcCC---CCeEEEEe--CC
Confidence 00011111 1124567888 99999999999999988888777642 24566675 13
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHH
Q 004368 721 AGHFSKSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 721 ~gH~~~~~~~~~~~~~~~~~~fl~~ 745 (758)
+||...-...+.+.+. +.+||.+
T Consensus 316 aGH~~~lE~Pe~~~~~--l~~FL~~ 338 (343)
T PRK08775 316 YGHDAFLKETDRIDAI--LTTALRS 338 (343)
T ss_pred ccHHHHhcCHHHHHHH--HHHHHHh
Confidence 8998766666655554 4678754
No 115
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.13 E-value=3.3e-11 Score=123.86 Aligned_cols=204 Identities=19% Similarity=0.264 Sum_probs=122.7
Q ss_pred CeEEEEEEEeeccccccCCCCCEEEEecCC-CccCCCCCCChHHHHHHHcC----cEEEEEecCCCCCCchhHHhc----
Q 004368 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGS-YEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGRQWYEN---- 566 (758)
Q Consensus 496 G~~i~~~l~~p~~~~~~~~~~P~vl~~hGg-~~~~~~~~~~~~~~~l~~~G----~~v~~~~~RG~g~~G~~~~~~---- 566 (758)
|..+.++|+.|+++ ...+++|+|++.||. ..... .........+++.| .++++++.-+.......|+..
T Consensus 5 g~~~~~~VylP~~y-~~~~~~PvlylldG~~~~~~~-~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-DPSKPYPVLYLLDGQSGWFRN-GNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp TEEEEEEEEECTTG-GTTTTEEEEEEESHTTHHHHH-HHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CCeEEEEEEECCCC-CCCCCCEEEEEccCCcccccc-chHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccc
Confidence 66788999999997 778899999999994 11100 00111223345554 455666654444333344421
Q ss_pred --ccccCCcChHhHHHH--HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCC
Q 004368 567 --GKFLKKKNTFTDFIA--CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIP 642 (758)
Q Consensus 567 --~~~~~~~~~~~D~~~--~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~ 642 (758)
.....+...+.+++. .+.++.++.-+++++.+|+|+|+||+.++.++.++|++|.++++.+|.++....+
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~~~~------ 156 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPSPSL------ 156 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETTHCH------
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccccccc------
Confidence 111222234455543 6777777777777779999999999999999999999999999999997754211
Q ss_pred CChhhhhccCCCCCHHHHHHHHhcCccccc-----CCCCCCeEEEeccCCCCCCCC----------hHHHHHHHHHHhcC
Q 004368 643 LTTAEWEEWGDPWKEEFYFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMY----------SEPAKFVAKLREMK 707 (758)
Q Consensus 643 ~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i-----~~~~~P~~Li~~G~~D~~V~~----------~~~~~~~~~L~~~~ 707 (758)
|+....+ . +...+|+.++ +.... .+++.+|..|..... ....++.+.|+..+
T Consensus 157 --------w~~~~~~-~---~~~~~~~~~~~~~~~~~~~~-~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 223 (251)
T PF00756_consen 157 --------WGPSDDE-A---WKENDPFDLIKALSQKKKPL-RIYLDVGTKDEFGGWEDSAQILQFLANNRELAQLLKAKG 223 (251)
T ss_dssp --------HHHSTCG-H---HGGCHHHHHHHHHHHTTSEE-EEEEEEETTSTTHHCSHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred --------cCcCCcH-H---hhhccHHHHhhhhhcccCCC-eEEEEeCCCCcccccccCHHHHHHHHHhHhhHHHHHHcC
Confidence 1111110 0 0112222211 11123 489999999985432 23334444555666
Q ss_pred CCCceEEEEecCCCCCC
Q 004368 708 TDDNILLFKCELGAGHF 724 (758)
Q Consensus 708 ~~~~~~~~~~~~~~gH~ 724 (758)
.+.....++ ++|.
T Consensus 224 ~~~~~~~~~----G~H~ 236 (251)
T PF00756_consen 224 IPHTYHVFP----GGHD 236 (251)
T ss_dssp CTTESEEEH----SESS
T ss_pred CCceEEEec----Cccc
Confidence 777666664 6783
No 116
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.12 E-value=4.9e-10 Score=111.25 Aligned_cols=167 Identities=22% Similarity=0.171 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh---ccCCC--CCCCChhhh---
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT---TMLDP--TIPLTTAEW--- 648 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~---~~~~~--~~~~~~~~~--- 648 (758)
+=|..|++||.+++.+++++|+|+|.|.||-+++.++...| .++|+|+.+|-.-+.. ..... .+|......
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~~ 82 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISKF 82 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhhc
Confidence 45788999999999999999999999999999999999998 7899999888432211 11111 111111000
Q ss_pred --hccCCCCCHHHHHHHH---hcCcccccCCCCCCeEEEeccCCCCCCCChHHH-HHHHHHHhcCCC--CceEEEEecCC
Q 004368 649 --EEWGDPWKEEFYFYMK---SYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPA-KFVAKLREMKTD--DNILLFKCELG 720 (758)
Q Consensus 649 --~e~g~p~~~~~~~~l~---~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~-~~~~~L~~~~~~--~~~~~~~~~~~ 720 (758)
..-+.......+.... .....-.++++++| +|+++|++|...|-.... .+.++|++++.+ .+.+.|+ +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~p-iLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~---~ 158 (213)
T PF08840_consen 83 SWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGP-ILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYP---G 158 (213)
T ss_dssp EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SE-EEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEET---T
T ss_pred eecCCcceehhhhhhcccccccccccccHHHcCCC-EEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcC---C
Confidence 0001110000000000 00111124455787 999999999988754444 566778888866 4555565 9
Q ss_pred CCCCCCCCh--------------------------HHHHHHHHHHHHHHHHhcC
Q 004368 721 AGHFSKSGR--------------------------FERLREAAFTYTFLMRALS 748 (758)
Q Consensus 721 ~gH~~~~~~--------------------------~~~~~~~~~~~~fl~~~l~ 748 (758)
+||....+. ....+.+..+++||.++|+
T Consensus 159 aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 159 AGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp B-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999752110 0233445567899999987
No 117
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.12 E-value=1.1e-08 Score=110.39 Aligned_cols=201 Identities=15% Similarity=0.105 Sum_probs=137.3
Q ss_pred eeEEECCCCCEEEEEEeC-----------------------------CCC--eEEEEEEEECCCCceeecccc-------
Q 004368 194 GCFQVSPDNKLVAYAEDT-----------------------------KGD--EIYTVYVIDIETGTPVGKPLV------- 235 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~-----------------------------~G~--e~~~l~v~dl~~g~~~~~~~~------- 235 (758)
..+.|||||++|||..-. .|+ ....|+|+|+++++.......
T Consensus 104 ~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~ 183 (353)
T PF00930_consen 104 SAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQD 183 (353)
T ss_dssp BSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSS
T ss_pred cceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCc
Confidence 467999999999998521 122 246899999999987432211
Q ss_pred CcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCcee---eEEEEc-CCCcEEEEEecCCcceE
Q 004368 236 GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYS---LGLQAS-ESKKFLFIASESKITRF 310 (758)
Q Consensus 236 ~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~---~~~~~S-~Dg~~l~~~s~~~~~~~ 310 (758)
.....+.|++|+ +|++...++......+...+..++. ..++.++....+. ..+.+. +++..+++.+...+..+
T Consensus 184 ~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~--~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~h 261 (353)
T PF00930_consen 184 YYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGE--TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRH 261 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTT--CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEE
T ss_pred cCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCc--eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcE
Confidence 125668999999 5998888877666677888887763 4455555544432 133444 77777777777777899
Q ss_pred EEEEeCCCCCceEEeecccccee--eEEeecCCEEEEEEcCCCCCCcEEEEEeCC-CCCcceeeecCCCCceeeeEEEeC
Q 004368 311 VFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVD-NTSETTVLIPHRESVKLQDIQLFI 387 (758)
Q Consensus 311 l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~ 387 (758)
||+++.+++. .+.|+.+.-.+. ..++++++.|||.++.......+||+++++ + +..+.|+.......-..+++++
T Consensus 262 ly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~-~~~~~LT~~~~~~~~~~~Spdg 339 (353)
T PF00930_consen 262 LYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG-GEPKCLTCEDGDHYSASFSPDG 339 (353)
T ss_dssp EEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET-TEEEESSTTSSTTEEEEE-TTS
T ss_pred EEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC-CCeEeccCCCCCceEEEECCCC
Confidence 9999999886 788887765552 348999999999999864567899999998 4 3444466554443244667777
Q ss_pred CEEEEEEEeCC
Q 004368 388 DHLAVYEREGG 398 (758)
Q Consensus 388 ~~l~~~~~~~g 398 (758)
++++..++.-+
T Consensus 340 ~y~v~~~s~~~ 350 (353)
T PF00930_consen 340 KYYVDTYSGPD 350 (353)
T ss_dssp SEEEEEEESSS
T ss_pred CEEEEEEcCCC
Confidence 88887776543
No 118
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.10 E-value=8.8e-09 Score=112.11 Aligned_cols=202 Identities=15% Similarity=0.107 Sum_probs=120.8
Q ss_pred EEEEeeCC-CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcC----cEEEEEecCCCCCCch
Q 004368 487 ERKWASAS-DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRG----FIFAIAQIRGGGELGR 561 (758)
Q Consensus 487 ~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G----~~v~~~~~RG~g~~G~ 561 (758)
+.+.+.|. -|.+..++++.|++. . .+++|+|++.||........ .......|++.| .+++++|.-.+.....
T Consensus 181 ~~~~~~S~~Lg~~r~v~VY~P~~y-~-~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~ 257 (411)
T PRK10439 181 KEIIWKSERLGNSRRVWIYTTGDA-A-PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQ 257 (411)
T ss_pred EEEEEEccccCCceEEEEEECCCC-C-CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCcccccc
Confidence 44555543 366788888889887 4 46799999999976543222 122334667777 3467777532111111
Q ss_pred hHHhcccccCCcChHhHHH--HHHHHHHHcC--CCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccC
Q 004368 562 QWYENGKFLKKKNTFTDFI--ACAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML 637 (758)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~--~~~~~l~~~~--~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~ 637 (758)
+ ......+.+++ ..+-++.++. ..|+++.+|+|.|+||+.++.++.++|++|.++++.+|-+-+...
T Consensus 258 e-------l~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~-- 328 (411)
T PRK10439 258 E-------LPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHR-- 328 (411)
T ss_pred c-------CCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCc--
Confidence 0 01111222222 1334444442 358899999999999999999999999999999999985311110
Q ss_pred CCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEe
Q 004368 638 DPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKC 717 (758)
Q Consensus 638 ~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 717 (758)
.+. ......+.+.+. ...+... .++|.+|..|... +...+++++.|+++|.++....+
T Consensus 329 -------------~~~-~~~~l~~~l~~~----~~~~~~l-r~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~-- 386 (411)
T PRK10439 329 -------------GGQ-QEGVLLEQLKAG----EVSARGL-RIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQV-- 386 (411)
T ss_pred -------------cCC-chhHHHHHHHhc----ccCCCCc-eEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEEC--
Confidence 000 011111222221 0111122 4899999998643 56789999999999987655444
Q ss_pred cCCCCCC
Q 004368 718 ELGAGHF 724 (758)
Q Consensus 718 ~~~~gH~ 724 (758)
.+||.
T Consensus 387 --~GGHd 391 (411)
T PRK10439 387 --DGGHD 391 (411)
T ss_pred --CCCcC
Confidence 35894
No 119
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.05 E-value=4.6e-09 Score=98.46 Aligned_cols=197 Identities=16% Similarity=0.198 Sum_probs=125.6
Q ss_pred CCCCCEEEEecCCCccCCCCCCCh-HHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCC
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (758)
.+..-++|++||. .+.-...+.. .+.++...|+-++-+|++|.|++...|+. .+.....+|+..+++++....
T Consensus 30 tgs~e~vvlcHGf-rS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~----Gn~~~eadDL~sV~q~~s~~n- 103 (269)
T KOG4667|consen 30 TGSTEIVVLCHGF-RSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY----GNYNTEADDLHSVIQYFSNSN- 103 (269)
T ss_pred cCCceEEEEeecc-ccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc----CcccchHHHHHHHHHHhccCc-
Confidence 4677899999993 3322222222 23466777999999999999998777764 233345599999999997632
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhh-hc------------cCCCCCHH
Q 004368 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW-EE------------WGDPWKEE 658 (758)
Q Consensus 592 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~e------------~g~p~~~~ 658 (758)
.---+|.|||-||.++...+..+++ .+-+|..+|=.|..+.... .+.-...+| .+ |+.-..++
T Consensus 104 --r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~e-Rlg~~~l~~ike~Gfid~~~rkG~y~~rvt~e 179 (269)
T KOG4667|consen 104 --RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINE-RLGEDYLERIKEQGFIDVGPRKGKYGYRVTEE 179 (269)
T ss_pred --eEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhh-hhcccHHHHHHhCCceecCcccCCcCceecHH
Confidence 2334799999999999999998877 5677777776665443211 111000111 11 11112222
Q ss_pred HHH-HHH-hcCcc-cccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCC
Q 004368 659 FYF-YMK-SYSPV-DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSG 728 (758)
Q Consensus 659 ~~~-~l~-~~sp~-~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~ 728 (758)
... .|. ..++. ..|. ..|| ||-+||..|..||.+.|.+|+..+.. .++.+.+ ++.|.+...
T Consensus 180 SlmdrLntd~h~aclkId-~~C~-VLTvhGs~D~IVPve~AkefAk~i~n----H~L~iIE---gADHnyt~~ 243 (269)
T KOG4667|consen 180 SLMDRLNTDIHEACLKID-KQCR-VLTVHGSEDEIVPVEDAKEFAKIIPN----HKLEIIE---GADHNYTGH 243 (269)
T ss_pred HHHHHHhchhhhhhcCcC-ccCc-eEEEeccCCceeechhHHHHHHhccC----CceEEec---CCCcCccch
Confidence 111 111 01111 1132 2787 99999999999999999999887764 3455565 999987544
No 120
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.05 E-value=4.8e-09 Score=113.30 Aligned_cols=225 Identities=17% Similarity=0.125 Sum_probs=128.4
Q ss_pred CCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCC
Q 004368 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKK 572 (758)
Q Consensus 493 s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~ 572 (758)
+.+|.++... ..+ ++..|.||++||..... ..|...+..| ..+|.|+.+|+||+|........ ...
T Consensus 111 ~~~~~~~~y~---~~G----~~~~~~ivllHG~~~~~--~~w~~~~~~L-~~~~~Via~DlpG~G~S~~p~~~----~~~ 176 (383)
T PLN03084 111 SSDLFRWFCV---ESG----SNNNPPVLLIHGFPSQA--YSYRKVLPVL-SKNYHAIAFDWLGFGFSDKPQPG----YGF 176 (383)
T ss_pred cCCceEEEEE---ecC----CCCCCeEEEECCCCCCH--HHHHHHHHHH-hcCCEEEEECCCCCCCCCCCccc----ccc
Confidence 4677766432 111 12358899999965433 2355544455 46899999999999865432110 011
Q ss_pred cChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchh-----hc---c----CC--
Q 004368 573 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVL-----TT---M----LD-- 638 (758)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~-----~~---~----~~-- 638 (758)
..+++++...+..++++- ..+++.++|+|+||.++..++.++|++++++|+.+|..... .. + ..
T Consensus 177 ~ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~ 254 (383)
T PLN03084 177 NYTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEI 254 (383)
T ss_pred cCCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhh
Confidence 235666666665555542 23689999999999999999999999999999888753210 00 0 00
Q ss_pred -CCCCC---------------ChhhhhccCCC----C-CHHH----HHHHHhcC-c----ccc---cCCCCCCeEEEecc
Q 004368 639 -PTIPL---------------TTAEWEEWGDP----W-KEEF----YFYMKSYS-P----VDN---VKAQNYPHILVTAG 685 (758)
Q Consensus 639 -~~~~~---------------~~~~~~e~g~p----~-~~~~----~~~l~~~s-p----~~~---i~~~~~P~~Li~~G 685 (758)
...+. .......|-.+ . .... +..+.... . +.. ..+++.| +||++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vP-vLiI~G 333 (383)
T PLN03084 255 FSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTP-ITVCWG 333 (383)
T ss_pred hhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCC-EEEEee
Confidence 00000 00000011111 0 0001 11111100 0 000 1245788 999999
Q ss_pred CCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 004368 686 LNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 744 (758)
Q Consensus 686 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 744 (758)
+.|..+++..++++++.. +.++++++ ++||.......+.+... +.+||.
T Consensus 334 ~~D~~v~~~~~~~~a~~~-----~a~l~vIp---~aGH~~~~E~Pe~v~~~--I~~Fl~ 382 (383)
T PLN03084 334 LRDRWLNYDGVEDFCKSS-----QHKLIELP---MAGHHVQEDCGEELGGI--ISGILS 382 (383)
T ss_pred CCCCCcCHHHHHHHHHhc-----CCeEEEEC---CCCCCcchhCHHHHHHH--HHHHhh
Confidence 999999987776666542 34566776 89998776665555443 455653
No 121
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.00 E-value=2.2e-09 Score=101.82 Aligned_cols=162 Identities=18% Similarity=0.227 Sum_probs=111.6
Q ss_pred HHHHHcCcEEEEEecCCCCCC--c------hhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHH
Q 004368 539 LSLLDRGFIFAIAQIRGGGEL--G------RQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 610 (758)
Q Consensus 539 ~~l~~~G~~v~~~~~RG~g~~--G------~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~ 610 (758)
-.++..||.|++||+=.|.-+ + ..|.+ +..-+..+.|+.+.++||..+| ++.+||++|+.+||-++.
T Consensus 61 dk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk~~g--~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 61 DKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLKNHG--DSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHHHcC--CcceeeEEEEeecceEEE
Confidence 456677999999998443111 1 12332 2333456799999999999776 469999999999999888
Q ss_pred HHHhhCCCceeEEEEcCCc-cchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCC
Q 004368 611 AVLNMRPDLFKAAVAAVPF-VDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP 689 (758)
Q Consensus 611 ~~~~~~p~~f~a~v~~~~~-~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~ 689 (758)
......| +|.|+++..|. +| .+ .+..+++| +|++.|+.|.
T Consensus 136 ~~~~~~~-~f~a~v~~hps~~d-------------------------~~------------D~~~vk~P-ilfl~ae~D~ 176 (242)
T KOG3043|consen 136 TLSAKDP-EFDAGVSFHPSFVD-------------------------SA------------DIANVKAP-ILFLFAELDE 176 (242)
T ss_pred Eeeccch-hheeeeEecCCcCC-------------------------hh------------HHhcCCCC-EEEEeecccc
Confidence 8888766 78888877662 11 11 12334577 9999999999
Q ss_pred CCCChHHHHHHHHHHhcCCC-CceEEEEecCCCCCCCCC---------ChHHHHHHHHHHHHHHHHhc
Q 004368 690 RVMYSEPAKFVAKLREMKTD-DNILLFKCELGAGHFSKS---------GRFERLREAAFTYTFLMRAL 747 (758)
Q Consensus 690 ~V~~~~~~~~~~~L~~~~~~-~~~~~~~~~~~~gH~~~~---------~~~~~~~~~~~~~~fl~~~l 747 (758)
.+|+.....+-++|++...- .++.+| ++.+|++.. ++...-+...+...||.+++
T Consensus 177 ~~p~~~v~~~ee~lk~~~~~~~~v~~f---~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~ 241 (242)
T KOG3043|consen 177 DVPPKDVKAWEEKLKENPAVGSQVKTF---SGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYL 241 (242)
T ss_pred cCCHHHHHHHHHHHhcCcccceeEEEc---CCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 99999988888888775432 234455 499998742 11112222455678888775
No 122
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.99 E-value=1.3e-09 Score=123.64 Aligned_cols=128 Identities=18% Similarity=0.120 Sum_probs=90.7
Q ss_pred EEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHc-C-cEEEEEecC-CCCCCchhHHhcccccCCcCh
Q 004368 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-G-FIFAIAQIR-GGGELGRQWYENGKFLKKKNT 575 (758)
Q Consensus 499 i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G-~~v~~~~~R-G~g~~G~~~~~~~~~~~~~~~ 575 (758)
+.+.|+.|... ...++.|+||++|||.......... ....|+.+ + ++|+.+||| |..++...... ...+...
T Consensus 79 l~l~i~~p~~~-~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~~~n~g 153 (493)
T cd00312 79 LYLNVYTPKNT-KPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---ELPGNYG 153 (493)
T ss_pred CeEEEEeCCCC-CCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CCCcchh
Confidence 45556667654 3356789999999985544333332 23455554 3 999999999 66555432111 2233345
Q ss_pred HhHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhh--CCCceeEEEEcCCccc
Q 004368 576 FTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVD 631 (758)
Q Consensus 576 ~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~~~~d 631 (758)
+.|..+|++|+.++ -..||++|.|+|+|+||+++.+++.. .+.+|+++|+.+|...
T Consensus 154 ~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 154 LKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 78999999999775 34799999999999999999888876 2458999999988654
No 123
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.96 E-value=2.6e-08 Score=101.18 Aligned_cols=211 Identities=18% Similarity=0.192 Sum_probs=125.5
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHH-HHHHcCCCC
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCT 593 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d 593 (758)
..+.+|++|| ||.+..- |-..+..|+. ...|..+|..|-|.+.+.=.. ......-..+++.++ |-++++.
T Consensus 89 ~~~plVliHG-yGAg~g~-f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~----~d~~~~e~~fvesiE~WR~~~~L-- 159 (365)
T KOG4409|consen 89 NKTPLVLIHG-YGAGLGL-FFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFS----IDPTTAEKEFVESIEQWRKKMGL-- 159 (365)
T ss_pred CCCcEEEEec-cchhHHH-HHHhhhhhhh-cCceEEecccCCCCCCCCCCC----CCcccchHHHHHHHHHHHHHcCC--
Confidence 3455677888 5554332 4444556665 899999999998866543211 111222346677665 5566665
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCC----C------------------------CCC-
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPT----I------------------------PLT- 644 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~----~------------------------~~~- 644 (758)
++..++|||+||||+...|.++|++++-.|+..|.-=..+-..+.+ . |+.
T Consensus 160 -~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp 238 (365)
T KOG4409|consen 160 -EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGP 238 (365)
T ss_pred -cceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccch
Confidence 6999999999999999999999999999999887411110000000 0 000
Q ss_pred ------------------hhhh-hcc------CCCCCHHHHHHHHhc-----Cc-ccccCCC--CCCeEEEeccCCCCCC
Q 004368 645 ------------------TAEW-EEW------GDPWKEEFYFYMKSY-----SP-VDNVKAQ--NYPHILVTAGLNDPRV 691 (758)
Q Consensus 645 ------------------~~~~-~e~------g~p~~~~~~~~l~~~-----sp-~~~i~~~--~~P~~Li~~G~~D~~V 691 (758)
..++ .+| .+|.-+..+..|.+. .| ++++..+ .+| +++++|++|= +
T Consensus 239 ~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~p-v~fiyG~~dW-m 316 (365)
T KOG4409|consen 239 KLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVP-VTFIYGDRDW-M 316 (365)
T ss_pred HHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCC-EEEEecCccc-c
Confidence 0000 001 122222233332211 12 2444444 488 9999999986 5
Q ss_pred CChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 004368 692 MYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 744 (758)
Q Consensus 692 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 744 (758)
...-+.++...|. ...++.+..+ ++||..-.+.++.+++. +..++.
T Consensus 317 D~~~g~~~~~~~~--~~~~~~~~v~---~aGHhvylDnp~~Fn~~--v~~~~~ 362 (365)
T KOG4409|consen 317 DKNAGLEVTKSLM--KEYVEIIIVP---GAGHHVYLDNPEFFNQI--VLEECD 362 (365)
T ss_pred cchhHHHHHHHhh--cccceEEEec---CCCceeecCCHHHHHHH--HHHHHh
Confidence 6666777776663 3345566776 99998877777777765 344443
No 124
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.95 E-value=9.8e-09 Score=108.40 Aligned_cols=213 Identities=19% Similarity=0.233 Sum_probs=127.7
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHc-CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
+..|.||++|| ++. ....|......|... |+.|..+|..|+|-.+ +.+ ....-+..+....+..+..+...
T Consensus 56 ~~~~pvlllHG-F~~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s--~~~----~~~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHG-FGA-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS--PLP----RGPLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEecc-ccC-CcccHhhhccccccccceEEEEEecCCCCcCC--CCC----CCCceehhHHHHHHHHHHHhhcC
Confidence 45788999999 444 445566655555554 6999999999965221 111 11124556677777666555443
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCCceeEEE---EcCCccchhhcc-----------CC---CCCCCC---h-hhhh--
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV---AAVPFVDVLTTM-----------LD---PTIPLT---T-AEWE-- 649 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v---~~~~~~d~~~~~-----------~~---~~~~~~---~-~~~~-- 649 (758)
+++.++|+|+||+++..+|+.+|+..+.+| ...+........ .. .-.|.. . ..|.
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 449999999999999999999999999998 443332211110 00 000000 0 0000
Q ss_pred -------ccCCC-CCHHHHHHH------------------Hh-----cCcccccCCCC-CCeEEEeccCCCCCCCChHHH
Q 004368 650 -------EWGDP-WKEEFYFYM------------------KS-----YSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPA 697 (758)
Q Consensus 650 -------e~g~p-~~~~~~~~l------------------~~-----~sp~~~i~~~~-~P~~Li~~G~~D~~V~~~~~~ 697 (758)
.+.++ .+.+.+..+ .. ..+...++++. +| +||++|..|..+|.+.+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p-vlii~G~~D~~~p~~~~~ 284 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCP-VLIIWGDKDQIVPLELAE 284 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCc-eEEEEcCcCCccCHHHHH
Confidence 00111 011110000 00 22334556664 88 999999999999998777
Q ss_pred HHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 698 KFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 698 ~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
++.+++ ..++++.++ ++||.-..++++.+... +..|+.+.
T Consensus 285 ~~~~~~----pn~~~~~I~---~~gH~~h~e~Pe~~~~~--i~~Fi~~~ 324 (326)
T KOG1454|consen 285 ELKKKL----PNAELVEIP---GAGHLPHLERPEEVAAL--LRSFIARL 324 (326)
T ss_pred HHHhhC----CCceEEEeC---CCCcccccCCHHHHHHH--HHHHHHHh
Confidence 776655 344566665 99998777777766654 67888765
No 125
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.95 E-value=1.4e-08 Score=128.66 Aligned_cols=234 Identities=15% Similarity=0.094 Sum_probs=131.1
Q ss_pred EEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhH
Q 004368 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 578 (758)
Q Consensus 499 i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D 578 (758)
+..++.+.... .....|+||++||..+... .|......| ..+|.|+.+|+||+|.+...-...........++++
T Consensus 1356 ~~~~i~~~~~G--~~~~~~~vVllHG~~~s~~--~w~~~~~~L-~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~ 1430 (1655)
T PLN02980 1356 FSCLIKVHEVG--QNAEGSVVLFLHGFLGTGE--DWIPIMKAI-SGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVEL 1430 (1655)
T ss_pred eEEEEEEEecC--CCCCCCeEEEECCCCCCHH--HHHHHHHHH-hCCCEEEEEcCCCCCCCCCccccccccccccCCHHH
Confidence 55555544321 1224589999999655443 354444444 457999999999998764210000000111234566
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh-------ccCCCC----C-CCChh
Q 004368 579 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT-------TMLDPT----I-PLTTA 646 (758)
Q Consensus 579 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~-------~~~~~~----~-~~~~~ 646 (758)
+.+.+..++++ ...+++.++|+|+||.++..++.++|++++++|+.++...+.. ...... + .....
T Consensus 1431 ~a~~l~~ll~~--l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 1508 (1655)
T PLN02980 1431 VADLLYKLIEH--ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLE 1508 (1655)
T ss_pred HHHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHH
Confidence 66655555544 2357999999999999999999999999999887765321100 000000 0 00000
Q ss_pred hh-hccC----------CC------------CCHHHH-HHHHhcC------cccccCCCCCCeEEEeccCCCCCCCChHH
Q 004368 647 EW-EEWG----------DP------------WKEEFY-FYMKSYS------PVDNVKAQNYPHILVTAGLNDPRVMYSEP 696 (758)
Q Consensus 647 ~~-~e~g----------~p------------~~~~~~-~~l~~~s------p~~~i~~~~~P~~Li~~G~~D~~V~~~~~ 696 (758)
.+ ..|. .+ .+...+ ..+...+ -...+.++++| +|+++|++|..++ ..+
T Consensus 1509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~P-tLlI~Ge~D~~~~-~~a 1586 (1655)
T PLN02980 1509 IFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTP-LLLVVGEKDVKFK-QIA 1586 (1655)
T ss_pred HHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCC-EEEEEECCCCccH-HHH
Confidence 00 0010 00 000000 0111111 11235566888 9999999998764 667
Q ss_pred HHHHHHHHhcCC--------CCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 697 AKFVAKLREMKT--------DDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 697 ~~~~~~L~~~~~--------~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
.++.+.+..... ..++++++ ++||.......+.+.+. +..||.+.
T Consensus 1587 ~~~~~~i~~a~~~~~~~~~~~a~lvvI~---~aGH~~~lE~Pe~f~~~--I~~FL~~~ 1639 (1655)
T PLN02980 1587 QKMYREIGKSKESGNDKGKEIIEIVEIP---NCGHAVHLENPLPVIRA--LRKFLTRL 1639 (1655)
T ss_pred HHHHHHccccccccccccccceEEEEEC---CCCCchHHHCHHHHHHH--HHHHHHhc
Confidence 777776654210 13566776 99998765555555443 56788764
No 126
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.95 E-value=3.4e-09 Score=105.46 Aligned_cols=115 Identities=19% Similarity=0.275 Sum_probs=87.7
Q ss_pred EEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhH
Q 004368 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD 578 (758)
Q Consensus 499 i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D 578 (758)
.|..+++|.+. +.+|+||+.|| +.....+ |......+++.||+|+.++...-.. .....+.++
T Consensus 4 ~~l~v~~P~~~----g~yPVv~f~~G-~~~~~s~-Ys~ll~hvAShGyIVV~~d~~~~~~-----------~~~~~~~~~ 66 (259)
T PF12740_consen 4 KPLLVYYPSSA----GTYPVVLFLHG-FLLINSW-YSQLLEHVASHGYIVVAPDLYSIGG-----------PDDTDEVAS 66 (259)
T ss_pred CCeEEEecCCC----CCcCEEEEeCC-cCCCHHH-HHHHHHHHHhCceEEEEecccccCC-----------CCcchhHHH
Confidence 35677888765 78999999999 4433333 7777789999999999999554221 122345678
Q ss_pred HHHHHHHHHHc--------CCCCCCcEEEEEeChhHHHHHHHHhhC-----CCceeEEEEcCCcc
Q 004368 579 FIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMR-----PDLFKAAVAAVPFV 630 (758)
Q Consensus 579 ~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~-----p~~f~a~v~~~~~~ 630 (758)
+.+.++||.+. .-.|-+||+|+|||.||-++.+++..+ +.+|+|+++..|+-
T Consensus 67 ~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 67 AAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 88889998763 125788999999999999999888876 55899999999974
No 127
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.95 E-value=1e-08 Score=110.98 Aligned_cols=224 Identities=15% Similarity=0.150 Sum_probs=127.9
Q ss_pred CCCEEEEecCCCccCC----------CCCCChHH----HHHHHcCcEEEEEecCCCCC--------CchhHHhcccc---
Q 004368 515 SDPLLLYGYGSYEICN----------DPAFNSSR----LSLLDRGFIFAIAQIRGGGE--------LGRQWYENGKF--- 569 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~----------~~~~~~~~----~~l~~~G~~v~~~~~RG~g~--------~G~~~~~~~~~--- 569 (758)
+.++||++|+-.+.+. .++|.... ..+=..-|-|+++|+-|++. .|..-...+.+
T Consensus 55 ~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~ 134 (389)
T PRK06765 55 KSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPY 134 (389)
T ss_pred CCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCcc
Confidence 4689999998444221 12221111 23333569999999998752 22111111111
Q ss_pred --cCCcChHhHHHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhhCCCceeEEEEcCCcc--c-h-----hh----
Q 004368 570 --LKKKNTFTDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV--D-V-----LT---- 634 (758)
Q Consensus 570 --~~~~~~~~D~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~--d-~-----~~---- 634 (758)
..-..++.|+++++..++++-.+ +++. ++|+|+||.+++.++.++|++++.+|+.+.-. + + ..
T Consensus 135 ~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ 212 (389)
T PRK06765 135 GMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAE 212 (389)
T ss_pred CCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHH
Confidence 12236789988888877765333 6775 99999999999999999999999888775421 1 1 01
Q ss_pred -ccCCCC----------CCC---------------Chhhh-hccCCC-------------------------------CC
Q 004368 635 -TMLDPT----------IPL---------------TTAEW-EEWGDP-------------------------------WK 656 (758)
Q Consensus 635 -~~~~~~----------~~~---------------~~~~~-~e~g~p-------------------------------~~ 656 (758)
...++. .|. ....+ ..++.- .|
T Consensus 213 ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~D 292 (389)
T PRK06765 213 AIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVD 292 (389)
T ss_pred HHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccC
Confidence 001111 010 00000 111110 01
Q ss_pred HHHHHH----HHhc-------CcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 657 EEFYFY----MKSY-------SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 657 ~~~~~~----l~~~-------sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
+..|-+ +..+ +....+.+++.| +|+++|..|..+|+.+++++++.+...+...+++.++ .+.||..
T Consensus 293 an~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~P-tLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~--s~~GH~~ 369 (389)
T PRK06765 293 ANHWLYLAKAVQLFDAGHGFSSLEEALSNIEAN-VLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIE--SINGHMA 369 (389)
T ss_pred hhhHHHHHHHHHhcCCccccCCHHHHHhcCCCC-EEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEEC--CCCCcch
Confidence 111111 1111 122234466888 9999999999999999999999887655555566664 2489976
Q ss_pred CCChHHHHHHHHHHHHHHHH
Q 004368 726 KSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 726 ~~~~~~~~~~~~~~~~fl~~ 745 (758)
.....+.+... +.+||.+
T Consensus 370 ~le~p~~~~~~--I~~FL~~ 387 (389)
T PRK06765 370 GVFDIHLFEKK--IYEFLNR 387 (389)
T ss_pred hhcCHHHHHHH--HHHHHcc
Confidence 55454544443 4567654
No 128
>COG0627 Predicted esterase [General function prediction only]
Probab=98.94 E-value=1.2e-08 Score=105.96 Aligned_cols=226 Identities=16% Similarity=0.155 Sum_probs=140.4
Q ss_pred CCCCCEEEEecCCCccC-CCCCCChHHHHHHHcCcEEEEEecC--------------CCC-CCchhHHhcccccCCcChH
Q 004368 513 DGSDPLLLYGYGSYEIC-NDPAFNSSRLSLLDRGFIFAIAQIR--------------GGG-ELGRQWYENGKFLKKKNTF 576 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~-~~~~~~~~~~~l~~~G~~v~~~~~R--------------G~g-~~G~~~~~~~~~~~~~~~~ 576 (758)
+++.|++++.||--+.. .-..+..........|++++.+|.. |++ ++-.+|.......+ ...+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~q~ 129 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PYQW 129 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-ccch
Confidence 56788888888843221 1111222223444568888887432 322 33344444321111 3445
Q ss_pred hHHHHH-HH-HHHHcCCCCC--CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCC---CCCCChhhh-
Q 004368 577 TDFIAC-AE-YLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDP---TIPLTTAEW- 648 (758)
Q Consensus 577 ~D~~~~-~~-~l~~~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~---~~~~~~~~~- 648 (758)
++++.- +- .+.+...++. ++.+|+|+||||+-++.+++++|++|+.+.+.+|+++..+.+... ..++....+
T Consensus 130 ~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~~~ 209 (316)
T COG0627 130 ETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKAFN 209 (316)
T ss_pred hHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCccHH
Confidence 666553 11 2333444455 389999999999999999999999999999999999976544333 122222222
Q ss_pred hccCCCCCHHHHHHHHhcCcccccCC---C----------CCCeEEEeccCCCCCCC--ChHHHHHHHHHHhcCCCCceE
Q 004368 649 EEWGDPWKEEFYFYMKSYSPVDNVKA---Q----------NYPHILVTAGLNDPRVM--YSEPAKFVAKLREMKTDDNIL 713 (758)
Q Consensus 649 ~e~g~p~~~~~~~~l~~~sp~~~i~~---~----------~~P~~Li~~G~~D~~V~--~~~~~~~~~~L~~~~~~~~~~ 713 (758)
..||...++ .+++++|..++++ . .-|.+++.+|..|.... ...++++.+++++.|.+....
T Consensus 210 ~~~G~~~~~----~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~~~~ 285 (316)
T COG0627 210 AMLGPDSDP----AWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPNGVR 285 (316)
T ss_pred HhcCCCccc----cccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCceee
Confidence 235655432 2356788777764 1 23568999999998764 445889999999999887654
Q ss_pred EEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCCC
Q 004368 714 LFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 750 (758)
Q Consensus 714 ~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 750 (758)
.. ++..|. ..-.-..+.+.+.|+...|+..
T Consensus 286 ~~---~~G~Hs----w~~w~~~l~~~~~~~a~~l~~~ 315 (316)
T COG0627 286 DQ---PGGDHS----WYFWASQLADHLPWLAGALGLA 315 (316)
T ss_pred eC---CCCCcC----HHHHHHHHHHHHHHHHHHhccC
Confidence 44 477884 2233334566789999888764
No 129
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.86 E-value=1.6e-08 Score=108.91 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=64.8
Q ss_pred CCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCc------h---hHH-------h-----cccc-c
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELG------R---QWY-------E-----NGKF-L 570 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G------~---~~~-------~-----~~~~-~ 570 (758)
.++.|+||+.||-.+.. ..|+..+..||++||+|+.++.|-+.... . ... + .... .
T Consensus 97 ~~~~PvvIFSHGlgg~R--~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T PF03403_consen 97 PGKFPVVIFSHGLGGSR--TSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDP 174 (379)
T ss_dssp SS-EEEEEEE--TT--T--TTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----G
T ss_pred CCCCCEEEEeCCCCcch--hhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccc
Confidence 36799999999965543 34888899999999999999999653211 1 000 0 0000 0
Q ss_pred CC---------cChHhHHHHHHHHHHH--c------------------CCCCCCcEEEEEeChhHHHHHHHHhhCCCcee
Q 004368 571 KK---------KNTFTDFIACAEYLIK--N------------------CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK 621 (758)
Q Consensus 571 ~~---------~~~~~D~~~~~~~l~~--~------------------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~ 621 (758)
.. ..-..|+..+++.|.+ . +-+|.++|+++|||+||..++.++.+. ..|+
T Consensus 175 ~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~ 253 (379)
T PF03403_consen 175 EEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFK 253 (379)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcc
Confidence 00 0112445556665542 1 346789999999999999999888875 6899
Q ss_pred EEEEcCCc
Q 004368 622 AAVAAVPF 629 (758)
Q Consensus 622 a~v~~~~~ 629 (758)
|+|+.-|.
T Consensus 254 ~~I~LD~W 261 (379)
T PF03403_consen 254 AGILLDPW 261 (379)
T ss_dssp EEEEES--
T ss_pred eEEEeCCc
Confidence 99976664
No 130
>PRK05855 short chain dehydrogenase; Validated
Probab=98.86 E-value=3e-08 Score=115.17 Aligned_cols=107 Identities=13% Similarity=0.118 Sum_probs=66.5
Q ss_pred eCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccC
Q 004368 492 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLK 571 (758)
Q Consensus 492 ~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~ 571 (758)
...||.+|..... . +...|+||++||..+.. ..|......| .+||.|+.+|+||+|...... ..
T Consensus 8 ~~~~g~~l~~~~~-g------~~~~~~ivllHG~~~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~------~~ 71 (582)
T PRK05855 8 VSSDGVRLAVYEW-G------DPDRPTVVLVHGYPDNH--EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPK------RT 71 (582)
T ss_pred EeeCCEEEEEEEc-C------CCCCCeEEEEcCCCchH--HHHHHHHHHh-hcceEEEEecCCCCCCCCCCC------cc
Confidence 3458877765422 1 12368999999965443 2355555555 679999999999998764311 11
Q ss_pred CcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 572 KKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 572 ~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
...+++++.+.+..+++.-.. ..++.++|||+||.++..++.+
T Consensus 72 ~~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 72 AAYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred cccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 122345555544444443111 2349999999999888777665
No 131
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.79 E-value=1.3e-08 Score=108.35 Aligned_cols=129 Identities=21% Similarity=0.259 Sum_probs=88.3
Q ss_pred CCCCeEEEEEEEeeccccccCCCCCEEEEecCCC---ccCCCCCCChHHHHHHHcC-cEEEEEecCCCCCCc-hhHHhcc
Q 004368 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSY---EICNDPAFNSSRLSLLDRG-FIFAIAQIRGGGELG-RQWYENG 567 (758)
Q Consensus 493 s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~---~~~~~~~~~~~~~~l~~~G-~~v~~~~~RG~g~~G-~~~~~~~ 567 (758)
|.|..-+ -|..|. . ..++.||+||+|||. |+...+.| .-..|+.+| ++|+.+|||-+- +| -++....
T Consensus 76 sEDCL~L--NIwaP~-~--~a~~~PVmV~IHGG~y~~Gs~s~~~y--dgs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~ 147 (491)
T COG2272 76 SEDCLYL--NIWAPE-V--PAEKLPVMVYIHGGGYIMGSGSEPLY--DGSALAARGDVVVVSVNYRLGA-LGFLDLSSLD 147 (491)
T ss_pred cccceeE--EeeccC-C--CCCCCcEEEEEeccccccCCCccccc--ChHHHHhcCCEEEEEeCccccc-ceeeehhhcc
Confidence 5566444 344565 1 235689999999983 22233323 347888988 999999999543 22 1222222
Q ss_pred --cccCCcChHhHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhhCCC---ceeEEEEcCCcc
Q 004368 568 --KFLKKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPFV 630 (758)
Q Consensus 568 --~~~~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~~~~ 630 (758)
........+.|++.|++|+.++ -..||++|.|+|.|+|++.++.+++. |. +|+-+|+.+|-.
T Consensus 148 ~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~ 217 (491)
T COG2272 148 TEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAA 217 (491)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCC
Confidence 1111125679999999999766 44699999999999999998888875 64 788888888754
No 132
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.78 E-value=8.1e-06 Score=85.58 Aligned_cols=204 Identities=14% Similarity=0.057 Sum_probs=109.9
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecccc-C-cceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-G-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~-~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
....|.+||++|.|..+..| ..++|++||++++.++++-. + ...+..+||++ .++|+... ..|+..+|.+
T Consensus 39 ~~~~ft~dG~kllF~s~~dg--~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-----~~l~~vdL~T 111 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDG--NRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-----RSLRRVDLDT 111 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTS--S-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-----TEEEEEETTT
T ss_pred cCCCcCCCCCEEEEEeccCC--CcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-----CeEEEEECCc
Confidence 35588999999999999888 48899999999999987542 2 12346889999 88887643 2699999998
Q ss_pred CCCCcEEEeeecCCceeeEEEE--cCCCcEEEEEecC-------------------CcceEEEEEeCCCCCceEEeeccc
Q 004368 271 DQSNDICLYHEKDDIYSLGLQA--SESKKFLFIASES-------------------KITRFVFYLDVSKPEELRVLTPRV 329 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~--S~Dg~~l~~~s~~-------------------~~~~~l~~~d~~~~~~~~~l~~~~ 329 (758)
. +...|++.++. +.....| ..|++.++..... ...++|+.+|+.+++ .+.+....
T Consensus 112 ~--e~~~vy~~p~~-~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~-~~~v~~~~ 187 (386)
T PF14583_consen 112 L--EERVVYEVPDD-WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGE-RKVVFEDT 187 (386)
T ss_dssp ----EEEEEE--TT-EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT---EEEEEEES
T ss_pred C--cEEEEEECCcc-cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCc-eeEEEecC
Confidence 7 45677776543 3322334 4578776544321 123579999999998 77776655
Q ss_pred cceee-EEeecCCEEEEEEcCCCC--CCcEEEEEeCCCCCcceeeecCCCC--ceeeeEEEeCCEEEEEEEeCCeeEEEE
Q 004368 330 VGVDT-AASHRGNHFFITRRSDEL--FNSELLACPVDNTSETTVLIPHRES--VKLQDIQLFIDHLAVYEREGGLQKITT 404 (758)
Q Consensus 330 ~~~~~-~~s~dg~~l~~~s~~~~~--~~~~L~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~l~v 404 (758)
..... .+||....++....++.. ...|++.++.++. ....+...... ..-+-|.+++..+.+.....+...-+|
T Consensus 188 ~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~-~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i 266 (386)
T PF14583_consen 188 DWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGS-NVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWI 266 (386)
T ss_dssp S-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEE
T ss_pred ccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCC-cceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEE
Confidence 44433 377766666655555422 2358999998763 22334333222 122445566777776655444444455
Q ss_pred EEcCC
Q 004368 405 YRLPA 409 (758)
Q Consensus 405 ~~l~~ 409 (758)
..++.
T Consensus 267 ~~~d~ 271 (386)
T PF14583_consen 267 AGYDP 271 (386)
T ss_dssp EEE-T
T ss_pred EeeCC
Confidence 55554
No 133
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.77 E-value=7.7e-07 Score=87.01 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=91.1
Q ss_pred eeEEECCCCCEEEEEEeC----CCC---eEEEEEEEECCCCceeecccc--CcceeEEEecCC-eEEEEEeCCCCCCceE
Q 004368 194 GCFQVSPDNKLVAYAEDT----KGD---EIYTVYVIDIETGTPVGKPLV--GVTASVEWAGNE-ALVYITMDEILRPDKA 263 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~----~G~---e~~~l~v~dl~~g~~~~~~~~--~~~~~~~wspDg-~l~y~~~~~~~~~~~v 263 (758)
..+.|+|+|++|++..+. .+. ....|+.++..+.......+. +.+..++|+|+| +|+.+... .+.++
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~---~~~~v 85 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGS---MPAKV 85 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEcc---CCccc
Confidence 356899999999998772 221 136788888776655444333 236679999999 77666432 23356
Q ss_pred EEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEE
Q 004368 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHF 343 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l 343 (758)
.++++.. +.+..+.. .. .-.+.|||+|++|++........+|.++|..+.+ ..............|||||++|
T Consensus 86 ~lyd~~~---~~i~~~~~--~~-~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~-~i~~~~~~~~t~~~WsPdGr~~ 158 (194)
T PF08662_consen 86 TLYDVKG---KKIFSFGT--QP-RNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK-KISTFEHSDATDVEWSPDGRYL 158 (194)
T ss_pred EEEcCcc---cEeEeecC--CC-ceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE-EeeccccCcEEEEEEcCCCCEE
Confidence 6667642 22233322 11 2257899999999987654444567888887543 2111122222334599999998
Q ss_pred EEEEcC
Q 004368 344 FITRRS 349 (758)
Q Consensus 344 ~~~s~~ 349 (758)
+..+..
T Consensus 159 ~ta~t~ 164 (194)
T PF08662_consen 159 ATATTS 164 (194)
T ss_pred EEEEec
Confidence 877653
No 134
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.72 E-value=1.2e-05 Score=84.40 Aligned_cols=241 Identities=15% Similarity=0.084 Sum_probs=130.2
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~ 272 (758)
..+.|+|||+.++.+.... ..|+++|+.+++.... ........+.|+|||..+|+.... ...++.+++.+.
T Consensus 34 ~~l~~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~---~~~l~~~d~~~~- 105 (300)
T TIGR03866 34 RGITLSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANED---DNLVTVIDIETR- 105 (300)
T ss_pred CceEECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCC---CCeEEEEECCCC-
Confidence 4578999999875554322 4699999999887652 222223457999999544544322 125888888764
Q ss_pred CCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEcCCCC
Q 004368 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDEL 352 (758)
Q Consensus 273 ~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~ 352 (758)
+....+.... ...++.++|||+++++.... ...++.+|..+++....+..........|+++|+.|++.+..+
T Consensus 106 -~~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-- 178 (300)
T TIGR03866 106 -KVLAEIPVGV--EPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIG-- 178 (300)
T ss_pred -eEEeEeeCCC--CcceEEECCCCCEEEEEecC--CCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCC--
Confidence 2222232111 12357899999998876543 2345667877654111121111112335899999887764433
Q ss_pred CCcEEEEEeCCCCCcceeeecCC-----CCceeeeE--EEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeec
Q 004368 353 FNSELLACPVDNTSETTVLIPHR-----ESVKLQDI--QLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEF 425 (758)
Q Consensus 353 ~~~~L~~~~~~~~~~~~~l~~~~-----~~~~~~~~--~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~ 425 (758)
..+..+|+++......+.... ......++ +.+++.+++....+ ..+.+|++.. ++.. ..+..
T Consensus 179 --~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~-~~~~------~~~~~ 247 (300)
T TIGR03866 179 --GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPA--NRVAVVDAKT-YEVL------DYLLV 247 (300)
T ss_pred --CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCC--CeEEEEECCC-CcEE------EEEEe
Confidence 467778876532211111110 11112233 44455655443322 3578888763 3211 11111
Q ss_pred cCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 426 IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 426 p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
...+..+.+++++..++.+. ..-..+..+|+.+++
T Consensus 248 ---~~~~~~~~~~~~g~~l~~~~---~~~~~i~v~d~~~~~ 282 (300)
T TIGR03866 248 ---GQRVWQLAFTPDEKYLLTTN---GVSNDVSVIDVAALK 282 (300)
T ss_pred ---CCCcceEEECCCCCEEEEEc---CCCCeEEEEECCCCc
Confidence 11233455677777664321 223468899988877
No 135
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.67 E-value=3.9e-07 Score=101.69 Aligned_cols=107 Identities=16% Similarity=0.046 Sum_probs=71.0
Q ss_pred CEEEEecCCCccCCCCC---CChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 517 PLLLYGYGSYEICNDPA---FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~---~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
+-||++||..+...-.. -...+..|+++||.|+++|.||.|.....+. ......+++.++++++.+. +.
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~--~g 260 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT------FDDYIRDGVIAALEVVEAI--TG 260 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC------hhhhHHHHHHHHHHHHHHh--cC
Confidence 44666777433221111 1346678999999999999999886543221 1112335678888888764 35
Q ss_pred CCcEEEEEeChhHHHHHH----HHhhC-CCceeEEEEcCCccc
Q 004368 594 KEKLCIEGRSAGGLLIGA----VLNMR-PDLFKAAVAAVPFVD 631 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~----~~~~~-p~~f~a~v~~~~~~d 631 (758)
.+++.++|+|+||.+++. +++.. |+++++++..+..+|
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 689999999999998522 34444 778888887776666
No 136
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.66 E-value=1.6e-06 Score=86.14 Aligned_cols=204 Identities=19% Similarity=0.133 Sum_probs=122.0
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhc
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYEN 566 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~ 566 (758)
..+.+.+.+|..+..--.|-... ..+.+..+||-+||.||+..+ |......|.+.|+.++.+|++|.|-......
T Consensus 7 ~~~k~~~~~~~~~~~~a~y~D~~-~~gs~~gTVv~~hGsPGSH~D--FkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-- 81 (297)
T PF06342_consen 7 KLVKFQAENGKIVTVQAVYEDSL-PSGSPLGTVVAFHGSPGSHND--FKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-- 81 (297)
T ss_pred EEEEcccccCceEEEEEEEEecC-CCCCCceeEEEecCCCCCccc--hhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc--
Confidence 34555667777666666665544 333445699999999998654 7778889999999999999999875432111
Q ss_pred ccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc-cc------------hh
Q 004368 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF-VD------------VL 633 (758)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~-~d------------~~ 633 (758)
. ..+-.+-..-++.|.++=-++ +++.++|||.|+-.|+.++..+|- .++++.+|+ +- .+
T Consensus 82 ----~-~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~~G~r~HkgIrp~~r~~~i 153 (297)
T PF06342_consen 82 ----Q-QYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINPPGLRPHKGIRPLSRMETI 153 (297)
T ss_pred ----c-ccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCcc--ceEEEecCCccccccCcCHHHHHHHH
Confidence 1 111133334444444443343 899999999999999999998863 455555442 10 00
Q ss_pred hccCCCCCCCChhh------hhccCCC--CCHHHHHHHHhcCc---------ccccCCCCCCeEEEeccCCCCCCCChHH
Q 004368 634 TTMLDPTIPLTTAE------WEEWGDP--WKEEFYFYMKSYSP---------VDNVKAQNYPHILVTAGLNDPRVMYSEP 696 (758)
Q Consensus 634 ~~~~~~~~~~~~~~------~~e~g~p--~~~~~~~~l~~~sp---------~~~i~~~~~P~~Li~~G~~D~~V~~~~~ 696 (758)
.++.+ -+|..... |...|-- .-.+....|+...- ++.+++.++| +|+..|.+|-.|.-+.+
T Consensus 154 ~~l~~-~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ik-vli~ygg~DhLIEeeI~ 231 (297)
T PF06342_consen 154 NYLYD-LLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIK-VLIAYGGKDHLIEEEIS 231 (297)
T ss_pred HHHHH-HhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCc-EEEEEcCcchhhHHHHH
Confidence 01000 01111111 1222322 12233334442221 1233444677 99999999999988877
Q ss_pred HHHHHHHHh
Q 004368 697 AKFVAKLRE 705 (758)
Q Consensus 697 ~~~~~~L~~ 705 (758)
.+++...+.
T Consensus 232 ~E~a~~f~~ 240 (297)
T PF06342_consen 232 FEFAMKFKG 240 (297)
T ss_pred HHHHHHhCC
Confidence 777776654
No 137
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.66 E-value=5.7e-07 Score=89.29 Aligned_cols=114 Identities=18% Similarity=0.233 Sum_probs=74.6
Q ss_pred CCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCC--------------CchhHHhcccccC--C----
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE--------------LGRQWYENGKFLK--K---- 572 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~--------------~G~~~~~~~~~~~--~---- 572 (758)
++++|+||+.||-.+. ..-|+..+..|+++||+|+++..|-... +-.+|...-.... +
T Consensus 115 ~~k~PvvvFSHGLggs--Rt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGS--RTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEecccccc--hhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 6789999999994443 3448888899999999999999986531 2233432111000 0
Q ss_pred --cCh---HhHHHHHHHHHHH---------------------cCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEc
Q 004368 573 --KNT---FTDFIACAEYLIK---------------------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA 626 (758)
Q Consensus 573 --~~~---~~D~~~~~~~l~~---------------------~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 626 (758)
++. ..+...|++-|.+ ++-+|..+++|+|||.||..+++....+ ..|+|+|+.
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~l 271 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIAL 271 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeee
Confidence 111 1233333333322 2346788999999999999998888864 579999965
Q ss_pred CCc
Q 004368 627 VPF 629 (758)
Q Consensus 627 ~~~ 629 (758)
-++
T Consensus 272 D~W 274 (399)
T KOG3847|consen 272 DAW 274 (399)
T ss_pred eee
Confidence 543
No 138
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.62 E-value=5.8e-06 Score=86.03 Aligned_cols=246 Identities=11% Similarity=0.175 Sum_probs=157.2
Q ss_pred EeeEEECCC--CCEEEEEEeCCCCeEEEEEEEECCCCceeeccc-cCcceeEEEecCC-eEEEEEe--CCCCCCceEEEE
Q 004368 193 VGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNE-ALVYITM--DEILRPDKAWLH 266 (758)
Q Consensus 193 i~~~~~SPD--G~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~wspDg-~l~y~~~--~~~~~~~~v~~~ 266 (758)
+.+.-..|| |.+|.|+.. -+||..++.+|+.++++. -++...+.++||| +++|++. .......+||.+
T Consensus 39 M~n~~l~PDI~GD~IiFt~~------DdlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v 112 (668)
T COG4946 39 MKNYYLNPDIYGDRIIFTCC------DDLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVV 112 (668)
T ss_pred hhhhhcCCcccCcEEEEEec------hHHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEE
Confidence 334455676 889999886 358999999999887743 3566778999999 8999654 334445679999
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCc---ceEEEEEeCCCCCceEEeeccccceeeEEeecCCEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKI---TRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHF 343 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~---~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l 343 (758)
+...++.+.+.-|. ..+.--..|+|||+.|+.+..... -.++|.+..++.+ ..+|.-+. ....+-.|| .+
T Consensus 113 ~~e~Ge~kRiTyfG---r~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~-~e~LnlGp--athiv~~dg-~i 185 (668)
T COG4946 113 PSEDGEAKRITYFG---RRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIK-TEPLNLGP--ATHIVIKDG-II 185 (668)
T ss_pred eCCCCcEEEEEEec---cccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCce-eeeccCCc--eeeEEEeCC-EE
Confidence 88888665444442 223222359999998876554432 2589999998875 44442221 122244566 56
Q ss_pred EEEEcCC---------CCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcc
Q 004368 344 FITRRSD---------ELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPL 414 (758)
Q Consensus 344 ~~~s~~~---------~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~ 414 (758)
++..|.- |+.+++|+.-...+ ...+.++.-+.+ +...-+.+++++|....+|..+++-.+++ |+.+
T Consensus 186 vigRntydLP~WK~YkGGtrGklWis~d~g-~tFeK~vdl~~~--vS~PmIV~~RvYFlsD~eG~GnlYSvdld--GkDl 260 (668)
T COG4946 186 VIGRNTYDLPHWKGYKGGTRGKLWISSDGG-KTFEKFVDLDGN--VSSPMIVGERVYFLSDHEGVGNLYSVDLD--GKDL 260 (668)
T ss_pred EEccCcccCcccccccCCccceEEEEecCC-cceeeeeecCCC--cCCceEEcceEEEEecccCccceEEeccC--Cchh
Confidence 6666532 24567777644322 233444443333 44556788999999999999887777666 6644
Q ss_pred ccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEEE
Q 004368 415 KSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLK 470 (758)
Q Consensus 415 ~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~~ 470 (758)
.+...|.+ | ..-+.+-|+.+++|+- ...||.||+++.+.+-+
T Consensus 261 -----rrHTnFtd--Y--Y~R~~nsDGkrIvFq~-----~GdIylydP~td~lekl 302 (668)
T COG4946 261 -----RRHTNFTD--Y--YPRNANSDGKRIVFQN-----AGDIYLYDPETDSLEKL 302 (668)
T ss_pred -----hhcCCchh--c--cccccCCCCcEEEEec-----CCcEEEeCCCcCcceee
Confidence 22233322 2 2234566899998854 46799999998874433
No 139
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.58 E-value=4.8e-08 Score=98.32 Aligned_cols=78 Identities=26% Similarity=0.247 Sum_probs=62.9
Q ss_pred cEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEE
Q 004368 546 FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVA 625 (758)
Q Consensus 546 ~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 625 (758)
|.|+++|.||.|.....| .........+|+.+.++.+.+.-.+ +++.++|+|+||.++..++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHW----DPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCC----GSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCc----cCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 679999999998765311 1233445678999999998876433 4599999999999999999999999999999
Q ss_pred cCCc
Q 004368 626 AVPF 629 (758)
Q Consensus 626 ~~~~ 629 (758)
.+++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9885
No 140
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.57 E-value=1e-06 Score=84.79 Aligned_cols=180 Identities=20% Similarity=0.183 Sum_probs=97.9
Q ss_pred EEEEecCCCccCCCCCCCh--HHHHHHHcCc--EEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 518 LLLYGYGSYEICNDPAFNS--SRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~--~~~~l~~~G~--~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
.|+|+|| +.++ ..+... ..+.+.+.|. .+..+|.+ ....+.++.++.++++. .
T Consensus 1 ~ilYlHG-F~Ss-p~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------------~~p~~a~~~l~~~i~~~--~ 57 (187)
T PF05728_consen 1 MILYLHG-FNSS-PQSFKAQALKQYFAEHGPDIQYPCPDLP-------------------PFPEEAIAQLEQLIEEL--K 57 (187)
T ss_pred CeEEecC-CCCC-CCCHHHHHHHHHHHHhCCCceEECCCCC-------------------cCHHHHHHHHHHHHHhC--C
Confidence 4899999 4432 222222 2345666654 45555543 12255666666666654 2
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCC--CCHHHHHHHHhcCcccc
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP--WKEEFYFYMKSYSPVDN 671 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p--~~~~~~~~l~~~sp~~~ 671 (758)
++.++++|.|+||+.+..++.+++ .++ |+.+|.+++...+.. .+... ....++.. ..+..+..++++....
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~-~iG~~--~~~~~~e~~~~~~~~~~~l~~l~~~~- 130 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD-YIGEQ--TNPYTGESYELTEEHIEELKALEVPY- 130 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH-hhCcc--ccCCCCccceechHhhhhcceEeccc-
Confidence 345999999999999999988874 445 778888775543311 11110 00111211 1222333333322111
Q ss_pred cCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHH
Q 004368 672 VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFL 743 (758)
Q Consensus 672 i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl 743 (758)
+ .... ++|++++..|..+++.++.+.++. ...++.. +++|.+.. -.+.+ ..+.+|+
T Consensus 131 ~-~~~~-~~lvll~~~DEvLd~~~a~~~~~~-------~~~~i~~---ggdH~f~~-f~~~l---~~i~~f~ 186 (187)
T PF05728_consen 131 P-TNPE-RYLVLLQTGDEVLDYREAVAKYRG-------CAQIIEE---GGDHSFQD-FEEYL---PQIIAFL 186 (187)
T ss_pred c-CCCc-cEEEEEecCCcccCHHHHHHHhcC-------ceEEEEe---CCCCCCcc-HHHHH---HHHHHhh
Confidence 1 1123 489999999999999766555432 1223333 88997642 22222 2356665
No 141
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.57 E-value=8.4e-08 Score=110.21 Aligned_cols=127 Identities=15% Similarity=0.148 Sum_probs=80.5
Q ss_pred EEEEEEeeccccccCCCCCEEEEecCCCccCCCCC--CChHHHHHHHcCcEEEEEecCCCCCCchhHHhccc-cc-CCcC
Q 004368 499 IPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA--FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK-FL-KKKN 574 (758)
Q Consensus 499 i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~--~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~-~~-~~~~ 574 (758)
+.+-|+.|+.. ..+.+.||+|++|||........ .......++.++.+|+.+|||-+- +| |...+. .. .+-.
T Consensus 109 L~LnI~~P~~~-~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~G--fl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 109 LYLNIYTPSNA-SSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FG--FLSLGDLDAPSGNY 184 (535)
T ss_dssp -EEEEEEETSS-SSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HH--H-BSSSTTSHBSTH
T ss_pred HHHhhhhcccc-ccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cc--cccccccccCchhh
Confidence 55666778876 44447999999999744332221 112224567789999999999431 11 111000 01 2345
Q ss_pred hHhHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhhC--CCceeEEEEcCCc
Q 004368 575 TFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMR--PDLFKAAVAAVPF 629 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~~~ 629 (758)
.+.|.+.|++|+.++ -.-||++|.|+|+|+||..+...+..- ..+|+.+|+.+|.
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 678999999999776 346999999999999999888777652 3589999999984
No 142
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.56 E-value=3.8e-07 Score=92.69 Aligned_cols=200 Identities=16% Similarity=0.141 Sum_probs=80.0
Q ss_pred CCCEEEEecCCCccCCCCCCCh-HHHHHHHcCcEEEEEecCC-CCCCchhHHhcccccCCcChHhHHHHHHHHHHHcC--
Q 004368 515 SDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRG-GGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-- 590 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG-~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-- 590 (758)
+.-+||++-|-...-..-.|.. .+..|-..||.++.+.++- .+++|..-. .++.+|+.+|++||....
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS--
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhcc
Confidence 3457888865322222222333 3345555799999999986 345664322 256799999999999883
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhhCC-----CceeEEEEcCCccchhhccCC------------------------CCC
Q 004368 591 YCTKEKLCIEGRSAGGLLIGAVLNMRP-----DLFKAAVAAVPFVDVLTTMLD------------------------PTI 641 (758)
Q Consensus 591 ~~d~~~i~i~G~S~GG~l~~~~~~~~p-----~~f~a~v~~~~~~d~~~~~~~------------------------~~~ 641 (758)
....++|++||||-|..-++..+.... ....++|+++|+.|-...... ..+
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~l 183 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEIL 183 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCcee
Confidence 236799999999999998888887642 568999999999983221100 000
Q ss_pred ------------CCChhhhhccCCCC-CHHHHHHHHhcCcc-cccCCCCCCeEEEeccCCCCCCCChHH-HHHHHHHHhc
Q 004368 642 ------------PLTTAEWEEWGDPW-KEEFYFYMKSYSPV-DNVKAQNYPHILVTAGLNDPRVMYSEP-AKFVAKLREM 706 (758)
Q Consensus 642 ------------~~~~~~~~e~g~p~-~~~~~~~l~~~sp~-~~i~~~~~P~~Li~~G~~D~~V~~~~~-~~~~~~L~~~ 706 (758)
|.+...|.....|. +.+.|..-..-.-+ ....++..| +|++.+.+|..||.+-- +++.++++.+
T Consensus 184 p~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~p-lLvl~Sg~DEyvP~~vdk~~Ll~rw~~a 262 (303)
T PF08538_consen 184 PREFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKP-LLVLYSGKDEYVPPWVDKEALLERWKAA 262 (303)
T ss_dssp ----GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S--EEEEEE--TT------------------
T ss_pred eccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCc-eEEEecCCCceecccccccccccccccc
Confidence 11111111111111 11111110000001 233445667 99999999999997543 5777777765
Q ss_pred CCC----CceEEEEecCCCCCCCC
Q 004368 707 KTD----DNILLFKCELGAGHFSK 726 (758)
Q Consensus 707 ~~~----~~~~~~~~~~~~gH~~~ 726 (758)
..+ ...-+++ ++.|...
T Consensus 263 ~~~~~~s~~S~iI~---GA~H~~~ 283 (303)
T PF08538_consen 263 TNPKIWSPLSGIIP---GASHNVS 283 (303)
T ss_dssp ------------------------
T ss_pred cccccccccccccc---ccccccc
Confidence 432 1223455 8999764
No 143
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.55 E-value=2.9e-07 Score=95.13 Aligned_cols=130 Identities=16% Similarity=0.070 Sum_probs=92.8
Q ss_pred EEEEeeCCC-CeEEEEEEEeeccccc--cCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhH
Q 004368 487 ERKWASASD-GTQIPICIVYRKNLVK--LDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQW 563 (758)
Q Consensus 487 ~~~~~~s~d-G~~i~~~l~~p~~~~~--~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~ 563 (758)
..+++...+ +.+++.++.+|...+. ...+.|+|++.||. |. ...+|......|++.||+|+.++..|+..-+..-
T Consensus 39 ~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~-Gs-~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~ 116 (365)
T COG4188 39 VTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGS-GS-YVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPA 116 (365)
T ss_pred EEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCC-CC-CccchhhhHHHHhhCceEEEeccCCCcccccCCh
Confidence 344444332 5678888888876510 11479999999993 22 2566888889999999999999999987655544
Q ss_pred HhcccccCC----cChHhHHHHHHHHHHHc-------CCCCCCcEEEEEeChhHHHHHHHHhhCCC
Q 004368 564 YENGKFLKK----KNTFTDFIACAEYLIKN-------CYCTKEKLCIEGRSAGGLLIGAVLNMRPD 618 (758)
Q Consensus 564 ~~~~~~~~~----~~~~~D~~~~~~~l~~~-------~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 618 (758)
+.++..... ..-..|+-..+++|.+. +-+|+.+|++.|+|+||+.++.++..+.+
T Consensus 117 ~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 117 AYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 444421111 12346888888888776 35789999999999999999888876554
No 144
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.53 E-value=3.2e-05 Score=81.11 Aligned_cols=195 Identities=15% Similarity=0.149 Sum_probs=107.0
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~ 272 (758)
..+.|+|||+.++.+.... ..|+++|+.+++.+.. ........++|+|||.++++..... ..++.++..+..
T Consensus 76 ~~~~~~~~g~~l~~~~~~~----~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~---~~~~~~d~~~~~ 148 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDD----NLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETT---NMAHFIDTKTYE 148 (300)
T ss_pred cEEEECCCCCEEEEEcCCC----CeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCC---CeEEEEeCCCCe
Confidence 4568999999886554322 3699999998765542 2122245689999994444433221 124445655441
Q ss_pred CCcEE-EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccc-----cc---eeeEEeecCCEE
Q 004368 273 SNDIC-LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-----VG---VDTAASHRGNHF 343 (758)
Q Consensus 273 ~~~~~-v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~-----~~---~~~~~s~dg~~l 343 (758)
... +.....+ ..+.|++||++|++..... ..|+++|+.+++..+.+.... .. ....++++|+.+
T Consensus 149 --~~~~~~~~~~~---~~~~~s~dg~~l~~~~~~~--~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~ 221 (300)
T TIGR03866 149 --IVDNVLVDQRP---RFAEFTADGKELWVSSEIG--GTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTA 221 (300)
T ss_pred --EEEEEEcCCCc---cEEEECCCCCEEEEEcCCC--CEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEE
Confidence 111 1111112 2467999999988764322 458888998765222222111 11 123478999987
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
++....+ .++.++|+.+. .....+.......-..++++++.|+.....++ .|.+|++..
T Consensus 222 ~~~~~~~----~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~--~i~v~d~~~ 280 (300)
T TIGR03866 222 FVALGPA----NRVAVVDAKTY-EVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSN--DVSVIDVAA 280 (300)
T ss_pred EEEcCCC----CeEEEEECCCC-cEEEEEEeCCCcceEEECCCCCEEEEEcCCCC--eEEEEECCC
Confidence 7654332 35888888652 22222222222222234445666654443344 488998873
No 145
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.52 E-value=1.1e-05 Score=82.73 Aligned_cols=191 Identities=16% Similarity=0.182 Sum_probs=110.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
+.-.++|++||+||=++...- .-||.+.-++.-.+..++.+ .+..+.||||+ .++-...++. +++.++
T Consensus 227 VWfl~FS~nGkyLAsaSkD~T---aiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~-----~~lwDv 298 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKDST---AIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEV-----LSLWDV 298 (519)
T ss_pred EEEEEEcCCCeeEeeccCCce---EEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHh-----eeeccC
Confidence 556799999999996554321 33454444333111113333 25668999999 5654444432 778888
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC--ceEEeeccccc-eeeEEeecCCEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVG-VDTAASHRGNHFFI 345 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~--~~~~l~~~~~~-~~~~~s~dg~~l~~ 345 (758)
.++ +-...|.....-...+..|-|||..++..+.+ ..++.+|+++.. .++-+. ... ....+++||++++.
T Consensus 299 ~tg--d~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d---r~i~~wdlDgn~~~~W~gvr--~~~v~dlait~Dgk~vl~ 371 (519)
T KOG0293|consen 299 DTG--DLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD---RTIIMWDLDGNILGNWEGVR--DPKVHDLAITYDGKYVLL 371 (519)
T ss_pred Ccc--hhhhhcccCcCCCcceeEEccCCceeEecCCC---CcEEEecCCcchhhcccccc--cceeEEEEEcCCCcEEEE
Confidence 887 34455654422223357799999997765443 567888998754 222221 111 23348899999998
Q ss_pred EEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCE-EEEEEEeCCeeEEEEEEcC
Q 004368 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-l~~~~~~~g~~~l~v~~l~ 408 (758)
++.+. ++..++.++. ...-++.++. .+.++++.++. ++++-..+ ..+.+|++.
T Consensus 372 v~~d~-----~i~l~~~e~~-~dr~lise~~--~its~~iS~d~k~~LvnL~~--qei~LWDl~ 425 (519)
T KOG0293|consen 372 VTVDK-----KIRLYNREAR-VDRGLISEEQ--PITSFSISKDGKLALVNLQD--QEIHLWDLE 425 (519)
T ss_pred Eeccc-----ceeeechhhh-hhhccccccC--ceeEEEEcCCCcEEEEEccc--CeeEEeecc
Confidence 87543 4555555431 1111444433 46678887764 33333333 247788886
No 146
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.51 E-value=2.3e-06 Score=89.92 Aligned_cols=200 Identities=22% Similarity=0.312 Sum_probs=114.4
Q ss_pred EEEEe-eccccccCCCCCEEEEecCC-CccCCCCCCChH---HHHHHHcCcEEEEEecCCCC--CCchhHHhcccccCCc
Q 004368 501 ICIVY-RKNLVKLDGSDPLLLYGYGS-YEICNDPAFNSS---RLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKK 573 (758)
Q Consensus 501 ~~l~~-p~~~~~~~~~~P~vl~~hGg-~~~~~~~~~~~~---~~~l~~~G~~v~~~~~RG~g--~~G~~~~~~~~~~~~~ 573 (758)
.|++. |.+. ++ +.-|+|||+||| |.....+..-.. ...+++ ...+++.||.-.. +.| ..-+
T Consensus 108 ~Wlvk~P~~~-~p-k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~---------~~yP 175 (374)
T PF10340_consen 108 YWLVKAPNRF-KP-KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHG---------HKYP 175 (374)
T ss_pred EEEEeCCccc-CC-CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCC---------CcCc
Confidence 46665 4443 22 345999999997 333333321111 123333 6689999987543 222 2234
Q ss_pred ChHhHHHHHHHHHH-HcCCCCCCcEEEEEeChhHHHHHHHHhhCC-----CceeEEEEcCCccchhhccCCCCCC-----
Q 004368 574 NTFTDFIACAEYLI-KNCYCTKEKLCIEGRSAGGLLIGAVLNMRP-----DLFKAAVAAVPFVDVLTTMLDPTIP----- 642 (758)
Q Consensus 574 ~~~~D~~~~~~~l~-~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p-----~~f~a~v~~~~~~d~~~~~~~~~~~----- 642 (758)
..+.++++..++|+ ++|. ++|.+||.||||.|++.++..-. ..-+.+|+.+|++++......+...
T Consensus 176 tQL~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~~~~~~~~~~~~n~ 252 (374)
T PF10340_consen 176 TQLRQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVPQDSQEGSSYHDNE 252 (374)
T ss_pred hHHHHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcCCCCCCCccccccc
Confidence 56789999999999 6554 78999999999999987775411 1348999999999976211111000
Q ss_pred ----CChhhhhcc-----CCCCCHHHHHHHHhcCcccccCC-----------CCCCeEEEeccCCCCCCCChHHHHHHHH
Q 004368 643 ----LTTAEWEEW-----GDPWKEEFYFYMKSYSPVDNVKA-----------QNYPHILVTAGLNDPRVMYSEPAKFVAK 702 (758)
Q Consensus 643 ----~~~~~~~e~-----g~p~~~~~~~~l~~~sp~~~i~~-----------~~~P~~Li~~G~~D~~V~~~~~~~~~~~ 702 (758)
+.......| |+ .+++.. ....|+-++.. -++ .++|+.|+++.. -.+.++|+++
T Consensus 253 ~~D~l~~~~~~~~~~~y~~~-~~~~~~---~~~~~~~n~~~n~d~~~W~~I~~~~-~vfVi~Ge~Evf--rddI~~~~~~ 325 (374)
T PF10340_consen 253 KRDMLSYKGLSMFGDAYIGN-NDPEND---LNSLPFVNIEYNFDAEDWKDILKKY-SVFVIYGEDEVF--RDDILEWAKK 325 (374)
T ss_pred cccccchhhHHHHHHhhccc-cccccc---cccCCccCcccCCChhHHHHhccCC-cEEEEECCcccc--HHHHHHHHHH
Confidence 000001111 11 011000 11122222111 134 499999998854 4599999999
Q ss_pred HHhcCCC-----CceEEEEecCCCCCCC
Q 004368 703 LREMKTD-----DNILLFKCELGAGHFS 725 (758)
Q Consensus 703 L~~~~~~-----~~~~~~~~~~~~gH~~ 725 (758)
+...+.. .+..+ ++++.|..
T Consensus 326 ~~~~~~~~~~~~~nv~~---~~~G~Hi~ 350 (374)
T PF10340_consen 326 LNDVKPNKFSNSNNVYI---DEGGIHIG 350 (374)
T ss_pred HhhcCccccCCcceEEE---ecCCcccc
Confidence 9976533 23333 34888865
No 147
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=98.51 E-value=3.1e-05 Score=75.77 Aligned_cols=193 Identities=14% Similarity=0.106 Sum_probs=114.1
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
..+....+|+||.+. ++.. ....+++||+++|+..+. +.+ ..-++++|+|+ +|.--+.|. .+.++
T Consensus 64 H~v~dv~~s~dg~~a-lS~s----wD~~lrlWDl~~g~~t~~-f~GH~~dVlsva~s~dn~qivSGSrDk-----Tiklw 132 (315)
T KOG0279|consen 64 HFVSDVVLSSDGNFA-LSAS----WDGTLRLWDLATGESTRR-FVGHTKDVLSVAFSTDNRQIVSGSRDK-----TIKLW 132 (315)
T ss_pred eEecceEEccCCceE-Eecc----ccceEEEEEecCCcEEEE-EEecCCceEEEEecCCCceeecCCCcc-----eeeee
Confidence 467889999999984 3333 345899999999987653 222 25669999999 664333332 24444
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCC-cEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-ee-EEeecCCEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESK-KFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DT-AASHRGNHF 343 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg-~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~-~~s~dg~~l 343 (758)
++-+. -...+.++....+...+.|+|.. ..++++.....+ |-+.|+++-+ ++.-..+..+. .+ .+||||..+
T Consensus 133 nt~g~--ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dkt--vKvWnl~~~~-l~~~~~gh~~~v~t~~vSpDGslc 207 (315)
T KOG0279|consen 133 NTLGV--CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKT--VKVWNLRNCQ-LRTTFIGHSGYVNTVTVSPDGSLC 207 (315)
T ss_pred eeccc--EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCce--EEEEccCCcc-hhhccccccccEEEEEECCCCCEE
Confidence 44332 12223333224455668899986 344444433333 4455776654 32222222222 22 399999855
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
+. + ...++++..|++.. .. +..-+....+.++.+.+++.++....+.. +.||+++.
T Consensus 208 as----G-gkdg~~~LwdL~~~--k~-lysl~a~~~v~sl~fspnrywL~~at~~s--IkIwdl~~ 263 (315)
T KOG0279|consen 208 AS----G-GKDGEAMLWDLNEG--KN-LYSLEAFDIVNSLCFSPNRYWLCAATATS--IKIWDLES 263 (315)
T ss_pred ec----C-CCCceEEEEEccCC--ce-eEeccCCCeEeeEEecCCceeEeeccCCc--eEEEeccc
Confidence 43 2 44678999999762 22 33333344567788888877766654433 78999884
No 148
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.50 E-value=4.6e-07 Score=88.18 Aligned_cols=118 Identities=19% Similarity=0.227 Sum_probs=87.3
Q ss_pred eEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChH
Q 004368 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 576 (758)
Q Consensus 497 ~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~ 576 (758)
-..|+.|+.|... |.+|+|++.||-.-. ...|+...+.++++||+|+.++.-..-. ..+..++
T Consensus 31 pPkpLlI~tP~~~----G~yPVilF~HG~~l~--ns~Ys~lL~HIASHGfIVVAPQl~~~~~-----------p~~~~Ei 93 (307)
T PF07224_consen 31 PPKPLLIVTPSEA----GTYPVILFLHGFNLY--NSFYSQLLAHIASHGFIVVAPQLYTLFP-----------PDGQDEI 93 (307)
T ss_pred CCCCeEEecCCcC----CCccEEEEeechhhh--hHHHHHHHHHHhhcCeEEEechhhcccC-----------CCchHHH
Confidence 3577888877664 889999999994322 3336666678899999999999753211 2344567
Q ss_pred hHHHHHHHHHHHc--------CCCCCCcEEEEEeChhHHHHHHHHhhC-CC-ceeEEEEcCCccc
Q 004368 577 TDFIACAEYLIKN--------CYCTKEKLCIEGRSAGGLLIGAVLNMR-PD-LFKAAVAAVPFVD 631 (758)
Q Consensus 577 ~D~~~~~~~l~~~--------~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~-~f~a~v~~~~~~d 631 (758)
++..++++||-+. --.+.++++++|||.||-.+.+++..+ .+ .|.|.|..-|+.-
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 8888899999653 125779999999999999999888866 33 3788887777643
No 149
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.50 E-value=7.8e-06 Score=92.93 Aligned_cols=159 Identities=12% Similarity=0.049 Sum_probs=99.4
Q ss_pred EEeeEEECCCCCEEEEEEeC---CCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCC-------CCCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDT---KGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDE-------ILRP 260 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~---~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~-------~~~~ 260 (758)
.+.++++||||+++||.... ..+...+||+.+. +++..+.+.....+.+.|+||| .++|+.... ....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 46789999999999999842 2234679999997 4444444333336679999998 788876421 1122
Q ss_pred ceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEE---EeCCCCC----ceEEeeccccc--
Q 004368 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY---LDVSKPE----ELRVLTPRVVG-- 331 (758)
Q Consensus 261 ~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~---~d~~~~~----~~~~l~~~~~~-- 331 (758)
.++|...+..+.... -+ +. -..++.|||||++|++... .+||+ +..+++. .++.+.....+
T Consensus 430 gql~~~~vd~ge~~~--~~---~g-~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~ 499 (591)
T PRK13616 430 GQLARTPVDASAVAS--RV---PG-PISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPGLGDTA 499 (591)
T ss_pred ceEEEEeccCchhhh--cc---CC-CcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecccCCcc
Confidence 357766665543211 11 11 1336789999999999773 36777 5555554 12334443333
Q ss_pred eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCC
Q 004368 332 VDTAASHRGNHFFITRRSDELFNSELLACPVDNT 365 (758)
Q Consensus 332 ~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~ 365 (758)
....|..++. |++.+.. .+..++.+++++.
T Consensus 500 ~~l~W~~~~~-L~V~~~~---~~~~v~~v~vDG~ 529 (591)
T PRK13616 500 VSLDWRTGDS-LVVGRSD---PEHPVWYVNLDGS 529 (591)
T ss_pred ccceEecCCE-EEEEecC---CCCceEEEecCCc
Confidence 2334887776 6666553 2456889998863
No 150
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.50 E-value=4.5e-07 Score=93.85 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=77.7
Q ss_pred CCCCCEEEEecCCCccCCCCCCCh-HHHHHHH-cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcC
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNS-SRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (758)
+...|++|++||..+.. ...|.. ....++. .++.|+++|++++..... ..+. ..-...-+++...+++|.++.
T Consensus 33 ~~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y--~~a~--~~~~~v~~~la~~l~~L~~~~ 107 (275)
T cd00707 33 NPSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVIVVDWGRGANPNY--PQAV--NNTRVVGAELAKFLDFLVDNT 107 (275)
T ss_pred CCCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEEEEECccccccCh--HHHH--HhHHHHHHHHHHHHHHHHHhc
Confidence 34578999999954433 223333 2334555 589999999998743221 1110 011112357777888888875
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 591 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 591 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
..+.++|.++|+|+||.+++.++.+.|++++.+++..|.
T Consensus 108 g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa 146 (275)
T cd00707 108 GLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPA 146 (275)
T ss_pred CCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCC
Confidence 567899999999999999999999999999999887664
No 151
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.46 E-value=0.00029 Score=71.93 Aligned_cols=259 Identities=16% Similarity=0.152 Sum_probs=139.7
Q ss_pred EeeEEECCCCCEEEEEEeCCCC-eEEEEEEEECCCCceeec---cccCcc-eeEEEecCCeEEEEEeCCCCCCceEEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGD-EIYTVYVIDIETGTPVGK---PLVGVT-ASVEWAGNEALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~-e~~~l~v~dl~~g~~~~~---~~~~~~-~~~~wspDg~l~y~~~~~~~~~~~v~~~~ 267 (758)
...+.|+|++++| |+....|. ....-|-+|-++|+...+ .+.+.. ..++.++||+++|++.-... .|-...
T Consensus 42 ptyl~~~~~~~~L-Y~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g---~v~v~p 117 (346)
T COG2706 42 PTYLAVNPDQRHL-YVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSG---SVSVYP 117 (346)
T ss_pred CceEEECCCCCEE-EEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCc---eEEEEE
Confidence 4567899999987 44443322 134556666666776533 333332 45788999977777653221 243444
Q ss_pred cCCCCCC----cEEEeeec--C----CceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEE-----eeccccce
Q 004368 268 LEADQSN----DICLYHEK--D----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV-----LTPRVVGV 332 (758)
Q Consensus 268 l~~~~~~----~~~v~~~~--~----~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~-----l~~~~~~~ 332 (758)
+.....- +.....+. + ....-...++|||++|+...- +.-+|++++++.+. +.. +.++..-.
T Consensus 118 ~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL--G~Dri~~y~~~dg~-L~~~~~~~v~~G~GPR 194 (346)
T COG2706 118 LQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL--GTDRIFLYDLDDGK-LTPADPAEVKPGAGPR 194 (346)
T ss_pred cccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec--CCceEEEEEcccCc-cccccccccCCCCCcc
Confidence 4332110 01111111 0 011123458999999886543 44567777777765 222 22222223
Q ss_pred eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCC-Cccee-----eecCCC--CceeeeEEEeCCEEEEEEEeCCeeEEEE
Q 004368 333 DTAASHRGNHFFITRRSDELFNSELLACPVDNT-SETTV-----LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITT 404 (758)
Q Consensus 333 ~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~-~~~~~-----l~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~l~v 404 (758)
...|.|+|+..|++...+ ..|.++..+.. +..+. .+|.+. .....++.+..+.-+++.++.|...|.+
T Consensus 195 Hi~FHpn~k~aY~v~EL~----stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~ 270 (346)
T COG2706 195 HIVFHPNGKYAYLVNELN----STVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAV 270 (346)
T ss_pred eEEEcCCCcEEEEEeccC----CEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEE
Confidence 445899999888877664 34444433321 22211 333332 2234456666666666677778888999
Q ss_pred EEcCCCCCccccccCCceeec-cCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEE
Q 004368 405 YRLPAVGEPLKSLQGGKSVEF-IDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVL 469 (758)
Q Consensus 405 ~~l~~~g~~~~~l~~~~~i~~-p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~ 469 (758)
+.++..++.+.. +.. +..+-.-..++.++.++.++..-..-.+ -.+|..|.++|+..+
T Consensus 271 f~V~~~~g~L~~------~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~-i~vf~~d~~TG~L~~ 329 (346)
T COG2706 271 FSVDPDGGKLEL------VGITPTEGQFPRDFNINPSGRFLIAANQKSDN-ITVFERDKETGRLTL 329 (346)
T ss_pred EEEcCCCCEEEE------EEEeccCCcCCccceeCCCCCEEEEEccCCCc-EEEEEEcCCCceEEe
Confidence 999876653311 111 1111111346666677666555443333 688999999998443
No 152
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.46 E-value=3.5e-06 Score=103.37 Aligned_cols=105 Identities=14% Similarity=0.079 Sum_probs=64.1
Q ss_pred CCCEEEEecCCCccCCCCCCCh---HHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHH----HHHHHHHH
Q 004368 515 SDPLLLYGYGSYEICNDPAFNS---SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF----IACAEYLI 587 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~---~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~----~~~~~~l~ 587 (758)
..|.||++||.......+...+ ....|+++||.|+++|.. . .+.. . +. ...++.|. .++++.+.
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G-~--~~~~--~-~~---~~~~l~~~i~~l~~~l~~v~ 136 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFG-S--PDKV--E-GG---MERNLADHVVALSEAIDTVK 136 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCC-C--CChh--H-cC---ccCCHHHHHHHHHHHHHHHH
Confidence 3478899999655544433322 256788999999999962 1 1111 0 00 01223333 33444433
Q ss_pred HcCCCCCCcEEEEEeChhHHHHHHHHhhC-CCceeEEEEcCCccc
Q 004368 588 KNCYCTKEKLCIEGRSAGGLLIGAVLNMR-PDLFKAAVAAVPFVD 631 (758)
Q Consensus 588 ~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~~~~d 631 (758)
+.. -+++.++|+|+||.++..+++.+ +++++.+|+.+..+|
T Consensus 137 ~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 137 DVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVD 178 (994)
T ss_pred Hhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccc
Confidence 333 25799999999999998777644 568888877555544
No 153
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.45 E-value=3.4e-07 Score=85.12 Aligned_cols=209 Identities=15% Similarity=0.106 Sum_probs=116.3
Q ss_pred EEEEecCCCccCCCCCCChHHHHHHHc-CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCc
Q 004368 518 LLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 596 (758)
.||.+-|..|+... .|.+....+-.. -+.++..|.||-|.+-..- ++..-+-..+|..+|++.+.+. +-++
T Consensus 44 ~iLlipGalGs~~t-Df~pql~~l~k~l~~TivawDPpGYG~SrPP~----Rkf~~~ff~~Da~~avdLM~aL---k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSYKT-DFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE----RKFEVQFFMKDAEYAVDLMEAL---KLEP 115 (277)
T ss_pred eeEecccccccccc-cCCHHHHhcCCCCceEEEEECCCCCCCCCCCc----ccchHHHHHHhHHHHHHHHHHh---CCCC
Confidence 45555676665443 476666555443 3899999999866432110 1111122347888888888775 4589
Q ss_pred EEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc--cchhhccCCCCCCCChhhhhc---------cCCCCCHHHHHH---
Q 004368 597 LCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF--VDVLTTMLDPTIPLTTAEWEE---------WGDPWKEEFYFY--- 662 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~--~d~~~~~~~~~~~~~~~~~~e---------~g~p~~~~~~~~--- 662 (758)
+.|+|+|-||..++.+++++++.+.-.|....- ++-...|....+.- ...|.+ ||.-.-+..++.
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRd-v~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD 194 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRD-VNKWSARGRQPYEDHYGPETFRTQWAAWVD 194 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHH-HhhhhhhhcchHHHhcCHHHHHHHHHHHHH
Confidence 999999999999999999999877655544332 22111111111100 001111 111000111110
Q ss_pred -HHhc-C------cccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHH
Q 004368 663 -MKSY-S------PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLR 734 (758)
Q Consensus 663 -l~~~-s------p~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~ 734 (758)
+.++ | --.-+.++++| +||+||..|+.|+-.+.--+ ..+. .-.++.+++ .++|.+.-...+.++
T Consensus 195 ~v~qf~~~~dG~fCr~~lp~vkcP-tli~hG~kDp~~~~~hv~fi-~~~~---~~a~~~~~p---eGkHn~hLrya~eFn 266 (277)
T KOG2984|consen 195 VVDQFHSFCDGRFCRLVLPQVKCP-TLIMHGGKDPFCGDPHVCFI-PVLK---SLAKVEIHP---EGKHNFHLRYAKEFN 266 (277)
T ss_pred HHHHHhhcCCCchHhhhcccccCC-eeEeeCCcCCCCCCCCccch-hhhc---ccceEEEcc---CCCcceeeechHHHH
Confidence 0100 0 01335677998 99999999999997776433 3332 223445555 888976544444454
Q ss_pred HHHHHHHHHHH
Q 004368 735 EAAFTYTFLMR 745 (758)
Q Consensus 735 ~~~~~~~fl~~ 745 (758)
.. ..+||.+
T Consensus 267 kl--v~dFl~~ 275 (277)
T KOG2984|consen 267 KL--VLDFLKS 275 (277)
T ss_pred HH--HHHHHhc
Confidence 44 5678764
No 154
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.45 E-value=2e-06 Score=81.88 Aligned_cols=162 Identities=19% Similarity=0.249 Sum_probs=89.3
Q ss_pred EEEecCCCccCCCCCCChHHH-HHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcE
Q 004368 519 LLYGYGSYEICNDPAFNSSRL-SLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKL 597 (758)
Q Consensus 519 vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i 597 (758)
|+++|| ++.+....|..... .+-+. +.|-.++. .. -|+..-++.|.++--...+.+
T Consensus 1 v~IvhG-~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------------------~~---P~~~~W~~~l~~~i~~~~~~~ 57 (171)
T PF06821_consen 1 VLIVHG-YGGSPPDHWQPWLERQLENS-VRVEQPDW------------------DN---PDLDEWVQALDQAIDAIDEPT 57 (171)
T ss_dssp EEEE---TTSSTTTSTHHHHHHHHTTS-EEEEEC--------------------TS-----HHHHHHHHHHCCHC-TTTE
T ss_pred CEEeCC-CCCCCccHHHHHHHHhCCCC-eEEecccc------------------CC---CCHHHHHHHHHHHHhhcCCCe
Confidence 466777 44444455544443 33333 66655543 01 133334444444311224569
Q ss_pred EEEEeChhHHHHHHHH-hhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCC
Q 004368 598 CIEGRSAGGLLIGAVL-NMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQN 676 (758)
Q Consensus 598 ~i~G~S~GG~l~~~~~-~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~ 676 (758)
.++|||.|+.+++..+ .+....++++++.+|+..-.... ..+ ....+. +... ....
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~---~~~----~~~~f~---------------~~p~-~~l~ 114 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPEP---FPP----ELDGFT---------------PLPR-DPLP 114 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHHC---CTC----GGCCCT---------------TSHC-CHHH
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCcccccc---hhh----hccccc---------------cCcc-cccC
Confidence 9999999999999998 77778999999999983210110 010 001111 1111 1123
Q ss_pred CCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHH
Q 004368 677 YPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLRE 735 (758)
Q Consensus 677 ~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~ 735 (758)
.| .+++.++||+.||+..+.+++++|.+ +++.++ ++||+........+.+
T Consensus 115 ~~-~~viaS~nDp~vp~~~a~~~A~~l~a-----~~~~~~---~~GHf~~~~G~~~~p~ 164 (171)
T PF06821_consen 115 FP-SIVIASDNDPYVPFERAQRLAQRLGA-----ELIILG---GGGHFNAASGFGPWPE 164 (171)
T ss_dssp CC-EEEEEETTBSSS-HHHHHHHHHHHT------EEEEET---S-TTSSGGGTHSS-HH
T ss_pred CC-eEEEEcCCCCccCHHHHHHHHHHcCC-----CeEECC---CCCCcccccCCCchHH
Confidence 55 47788999999999999999999854 456665 9999876554444443
No 155
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.45 E-value=4.8e-06 Score=85.21 Aligned_cols=195 Identities=13% Similarity=0.133 Sum_probs=108.3
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cc--cCcceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~--~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
..+..+.||||.++|.-- |.+ ..+++||+.+|..+.. .- ....++.+|-||| +++-.+.+ ..++..
T Consensus 270 ~~V~yi~wSPDdryLlaC----g~~-e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d-----r~i~~w 339 (519)
T KOG0293|consen 270 QPVSYIMWSPDDRYLLAC----GFD-EVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD-----RTIIMW 339 (519)
T ss_pred CceEEEEECCCCCeEEec----Cch-HheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC-----CcEEEe
Confidence 367789999999988521 221 2399999999987754 21 1235668999999 65433322 246666
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-eeEEeecCCEEEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFI 345 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~ 345 (758)
++.+.. .--++.....-..+++.|+||++++.... ..++.+++.++.. -+.+......+ ...+|.||+. +
T Consensus 340 dlDgn~---~~~W~gvr~~~v~dlait~Dgk~vl~v~~---d~~i~l~~~e~~~-dr~lise~~~its~~iS~d~k~--~ 410 (519)
T KOG0293|consen 340 DLDGNI---LGNWEGVRDPKVHDLAITYDGKYVLLVTV---DKKIRLYNREARV-DRGLISEEQPITSFSISKDGKL--A 410 (519)
T ss_pred cCCcch---hhcccccccceeEEEEEcCCCcEEEEEec---ccceeeechhhhh-hhccccccCceeEEEEcCCCcE--E
Confidence 665432 11222222223447889999999987653 3457777776643 22133333333 3347888773 3
Q ss_pred EEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeC--CEEEEEEEeCCeeEEEEEEcCC
Q 004368 346 TRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
+.|.. ...+...|++.....+....+.....+-.-++.+ +.++...++++ +++||+...
T Consensus 411 LvnL~---~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~--kvyIWhr~s 471 (519)
T KOG0293|consen 411 LVNLQ---DQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDS--KVYIWHRIS 471 (519)
T ss_pred EEEcc---cCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCc--eEEEEEccC
Confidence 34443 2457777776421111122222222221222222 35566666665 588888763
No 156
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.45 E-value=0.00028 Score=74.82 Aligned_cols=202 Identities=13% Similarity=0.139 Sum_probs=114.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce-eec---cccCcceeEEEecCC-eEEEEEeCCCC-------
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGK---PLVGVTASVEWAGNE-ALVYITMDEIL------- 258 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~-~~~---~~~~~~~~~~wspDg-~l~y~~~~~~~------- 258 (758)
+.+.-.++||.|-||| .|+...+|+|||....+. +.. .+.+.+..+.|+.|| +|+.+......
T Consensus 60 ~~vtVAkySPsG~yiA-----SGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~ 134 (603)
T KOG0318|consen 60 HQVTVAKYSPSGFYIA-----SGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLW 134 (603)
T ss_pred ceeEEEEeCCCceEEe-----ecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEe
Confidence 3455679999999988 465566899999876443 222 234446668999999 88877543211
Q ss_pred ---------------------CCceEEEEEcCCCCCCcEEEeeecC----------CceeeEEEEcCCCcEEEEEecCCc
Q 004368 259 ---------------------RPDKAWLHKLEADQSNDICLYHEKD----------DIYSLGLQASESKKFLFIASESKI 307 (758)
Q Consensus 259 ---------------------~~~~v~~~~l~~~~~~~~~v~~~~~----------~~~~~~~~~S~Dg~~l~~~s~~~~ 307 (758)
++.+-|+.-.+++ ..-+.+|+.+. ..|.-.+.+||||.+++-...+
T Consensus 135 DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sd-Dn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsD-- 211 (603)
T KOG0318|consen 135 DSGNSVGEITGHSRRINSVDFKPSRPFRIATGSD-DNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSD-- 211 (603)
T ss_pred cCCCccceeeccceeEeeeeccCCCceEEEeccC-CCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCC--
Confidence 1112222222221 11233444332 2234468899999876543332
Q ss_pred ceEEEEEeCCCCCceEEeec---ccccee-eEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeE
Q 004368 308 TRFVFYLDVSKPEELRVLTP---RVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDI 383 (758)
Q Consensus 308 ~~~l~~~d~~~~~~~~~l~~---~~~~~~-~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~ 383 (758)
..++++|-.+++..-.+-. ...++. ..|+||+++++-.+.+. ..+|+-+.... -..+|.....-+....+.
T Consensus 212 -gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk---t~KIWdVs~~s-lv~t~~~~~~v~dqqvG~ 286 (603)
T KOG0318|consen 212 -GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK---TIKIWDVSTNS-LVSTWPMGSTVEDQQVGC 286 (603)
T ss_pred -ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc---eEEEEEeeccc-eEEEeecCCchhceEEEE
Confidence 3578999888873334431 222232 24999999988776543 35565444322 124455544433445577
Q ss_pred EEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 384 QLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 384 ~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
-|.+++|+.+.. +|. +..++.+
T Consensus 287 lWqkd~lItVSl-~G~--in~ln~~ 308 (603)
T KOG0318|consen 287 LWQKDHLITVSL-SGT--INYLNPS 308 (603)
T ss_pred EEeCCeEEEEEc-CcE--EEEeccc
Confidence 788888875554 343 4455544
No 157
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.44 E-value=3e-06 Score=90.67 Aligned_cols=143 Identities=22% Similarity=0.285 Sum_probs=102.3
Q ss_pred CCCCceeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCC----hHHHHHHHcCcEEEEEecCC
Q 004368 480 DTNNYFTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----SSRLSLLDRGFIFAIAQIRG 555 (758)
Q Consensus 480 ~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~----~~~~~l~~~G~~v~~~~~RG 555 (758)
...+|.+|+..+.+.||.-+.. --.|... +++|+|++.||-..++..+--+ ...-.|+++||-|-.-|.||
T Consensus 42 ~~~gy~~E~h~V~T~DgYiL~l-hRIp~~~----~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG 116 (403)
T KOG2624|consen 42 EKYGYPVEEHEVTTEDGYILTL-HRIPRGK----KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG 116 (403)
T ss_pred HHcCCceEEEEEEccCCeEEEE-eeecCCC----CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC
Confidence 4457888999999999983332 2334431 7899999999976666554322 23347788999999999999
Q ss_pred CCCCchhHHhccc--------ccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCC---ceeEEE
Q 004368 556 GGELGRQWYENGK--------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAV 624 (758)
Q Consensus 556 ~g~~G~~~~~~~~--------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v 624 (758)
..|.++-..... ..+..-...|+.|.++++.+. +..+++..+|||.|+.....++..+|+ +++.++
T Consensus 117 -n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~ 193 (403)
T KOG2624|consen 117 -NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFI 193 (403)
T ss_pred -cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheee
Confidence 555543221111 111223457999999998775 467999999999999999988888876 577788
Q ss_pred EcCCcc
Q 004368 625 AAVPFV 630 (758)
Q Consensus 625 ~~~~~~ 630 (758)
+.+|++
T Consensus 194 aLAP~~ 199 (403)
T KOG2624|consen 194 ALAPAA 199 (403)
T ss_pred eecchh
Confidence 888765
No 158
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.43 E-value=3e-06 Score=80.89 Aligned_cols=216 Identities=19% Similarity=0.178 Sum_probs=121.5
Q ss_pred EEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhccc
Q 004368 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 568 (758)
Q Consensus 489 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~ 568 (758)
..++..||..+++. .+|.+. +.+-.+.+-|+++.... .|...++..+.+||.|+..||||.|+.-..-.....
T Consensus 8 ~~l~~~DG~~l~~~-~~pA~~-----~~~g~~~va~a~Gv~~~-fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~ 80 (281)
T COG4757 8 AHLPAPDGYSLPGQ-RFPADG-----KASGRLVVAGATGVGQY-FYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQ 80 (281)
T ss_pred cccccCCCccCccc-cccCCC-----CCCCcEEecccCCcchh-HhHHHHHHhhccCceEEEEecccccCCCccccccCc
Confidence 55778899999987 445442 34544555666665332 244455666778999999999999875332111001
Q ss_pred ccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCcee-EEEEcCCccchhhccCC---------
Q 004368 569 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK-AAVAAVPFVDVLTTMLD--------- 638 (758)
Q Consensus 569 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~-a~v~~~~~~d~~~~~~~--------- 638 (758)
.....-...|+.++++++.+.- -.-.+..+|||+||.+.+.+.+ +| +++ ++|..++ .-|-..|..
T Consensus 81 ~~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~-~~-k~~a~~vfG~g-agwsg~m~~~~~l~~~~l 155 (281)
T COG4757 81 WRYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ-HP-KYAAFAVFGSG-AGWSGWMGLRERLGAVLL 155 (281)
T ss_pred cchhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc-Cc-ccceeeEeccc-cccccchhhhhcccceee
Confidence 1112234579999999998742 2256889999999998776655 45 333 3332222 111111100
Q ss_pred -----------------------CCCCCC-hhhhhcc-CCC----CCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCC
Q 004368 639 -----------------------PTIPLT-TAEWEEW-GDP----WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDP 689 (758)
Q Consensus 639 -----------------------~~~~~~-~~~~~e~-g~p----~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~ 689 (758)
+++|.+ ..+|..| -.| .+|... .+ .+-.+++++| +.++...+|+
T Consensus 156 ~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~-~~-----~q~yaaVrtP-i~~~~~~DD~ 228 (281)
T COG4757 156 WNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMR-NY-----RQVYAAVRTP-ITFSRALDDP 228 (281)
T ss_pred ccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHh-HH-----HHHHHHhcCc-eeeeccCCCC
Confidence 011111 0111111 011 111111 00 1123456888 9999999999
Q ss_pred CCCChHHHHHHHHHHhcCCCCceEEEEecC-CCCCCC
Q 004368 690 RVMYSEPAKFVAKLREMKTDDNILLFKCEL-GAGHFS 725 (758)
Q Consensus 690 ~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~-~~gH~~ 725 (758)
-+|+....+|+...+++. .+...++..+ .-||..
T Consensus 229 w~P~As~d~f~~~y~nAp--l~~~~~~~~~~~lGH~g 263 (281)
T COG4757 229 WAPPASRDAFASFYRNAP--LEMRDLPRAEGPLGHMG 263 (281)
T ss_pred cCCHHHHHHHHHhhhcCc--ccceecCcccCcccchh
Confidence 999998888888777654 3444454322 258854
No 159
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.42 E-value=0.00021 Score=76.59 Aligned_cols=251 Identities=13% Similarity=0.068 Sum_probs=122.1
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECC-CCceeec---cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~-~g~~~~~---~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
..+.+||||++|+.+.... ..|.+++++ +|+.... ...+....++++|||+++|++... ...+..+++.
T Consensus 38 ~~l~~spd~~~lyv~~~~~----~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~---~~~v~v~~~~ 110 (330)
T PRK11028 38 QPMVISPDKRHLYVGVRPE----FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN---ANCVSVSPLD 110 (330)
T ss_pred ccEEECCCCCEEEEEECCC----CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC---CCeEEEEEEC
Confidence 4568999999986654322 346667775 4544321 222234568999999766766532 2346666665
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceE-------EeeccccceeeEEeecCCE
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-------VLTPRVVGVDTAASHRGNH 342 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~-------~l~~~~~~~~~~~s~dg~~ 342 (758)
++......+........-..+.++|||+++++.... ...|+++|+++...+. .+.....-....++|||++
T Consensus 111 ~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~--~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~ 188 (330)
T PRK11028 111 KDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLK--EDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQY 188 (330)
T ss_pred CCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCC--CCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCE
Confidence 332111111111111111245689999998875543 3457777775422121 1111111122358999998
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCC-Cccee---e--ecCCC--Cceeee--EEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 343 FFITRRSDELFNSELLACPVDNT-SETTV---L--IPHRE--SVKLQD--IQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 343 l~~~s~~~~~~~~~L~~~~~~~~-~~~~~---l--~~~~~--~~~~~~--~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
+|.....+ ..|..++++.. +..+. + ++... .....+ ++++++++++. ..+...+.+++++.++.
T Consensus 189 lyv~~~~~----~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~--~~~~~~I~v~~i~~~~~ 262 (330)
T PRK11028 189 AYCVNELN----SSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC--DRTASLISVFSVSEDGS 262 (330)
T ss_pred EEEEecCC----CEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe--cCCCCeEEEEEEeCCCC
Confidence 87764433 35555555421 11111 1 12110 011112 34555566654 23344688888875443
Q ss_pred ccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 413 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 413 ~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
..+.+ ..+... .....+..+++++.++++-. ...--.+|..|..++.
T Consensus 263 ~~~~~---~~~~~~---~~p~~~~~~~dg~~l~va~~-~~~~v~v~~~~~~~g~ 309 (330)
T PRK11028 263 VLSFE---GHQPTE---TQPRGFNIDHSGKYLIAAGQ-KSHHISVYEIDGETGL 309 (330)
T ss_pred eEEEe---EEEecc---ccCCceEECCCCCEEEEEEc-cCCcEEEEEEcCCCCc
Confidence 22110 111110 01123456677777755432 2222345555555555
No 160
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.41 E-value=3.8e-06 Score=79.71 Aligned_cols=188 Identities=19% Similarity=0.199 Sum_probs=109.6
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecC------CCCCCchhHHhcccccCC-cChHhHHHH---HHHH
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIR------GGGELGRQWYENGKFLKK-KNTFTDFIA---CAEY 585 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~R------G~g~~G~~~~~~~~~~~~-~~~~~D~~~---~~~~ 585 (758)
.-+||+.||--.+. .++......+--+..-.++|+.+ -.|..+..|.+....... ..+-..+.. .+..
T Consensus 3 ~atIi~LHglGDsg--~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~ 80 (206)
T KOG2112|consen 3 TATIIFLHGLGDSG--SGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIAN 80 (206)
T ss_pred eEEEEEEecCCCCC--ccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHH
Confidence 35799999943222 22322222333345556666432 233344556654432211 112222222 3333
Q ss_pred HHHc---CCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHH
Q 004368 586 LIKN---CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFY 662 (758)
Q Consensus 586 l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~ 662 (758)
|+++ ..++++||++.|.|+||.+++.++..+|-...+++...++.--... +.|..
T Consensus 81 Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------------~~~~~------ 138 (206)
T KOG2112|consen 81 LIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------------GLPGW------ 138 (206)
T ss_pred HHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------------hccCC------
Confidence 3332 3468899999999999999999999886555555555554321110 00100
Q ss_pred HHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHH
Q 004368 663 MKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTF 742 (758)
Q Consensus 663 l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~f 742 (758)
. | .. +++|++..||+.|+.||..-..+....|+..+.. +.++..++-+|... -++..+...|
T Consensus 139 -~---~---~~--~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~---~~f~~y~g~~h~~~------~~e~~~~~~~ 200 (206)
T KOG2112|consen 139 -L---P---GV--NYTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR---VTFKPYPGLGHSTS------PQELDDLKSW 200 (206)
T ss_pred -c---c---cc--CcchhheecccCCceeehHHHHHHHHHHHHcCCc---eeeeecCCcccccc------HHHHHHHHHH
Confidence 0 0 00 1345999999999999999999999999999876 45666669999642 2234445678
Q ss_pred HHH
Q 004368 743 LMR 745 (758)
Q Consensus 743 l~~ 745 (758)
+.+
T Consensus 201 ~~~ 203 (206)
T KOG2112|consen 201 IKT 203 (206)
T ss_pred HHH
Confidence 766
No 161
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.38 E-value=1.5e-06 Score=85.26 Aligned_cols=116 Identities=19% Similarity=0.189 Sum_probs=79.4
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHc-CcEEEEEecCCCCCCchhHHh
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYE 565 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~ 565 (758)
+.+.++..|+ ++..++-.|. ...-|++++.|||.-+ .-+|...+..+.++ -..++++|.||+|+.-.+-..
T Consensus 51 edv~i~~~~~-t~n~Y~t~~~-----~t~gpil~l~HG~G~S--~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~ 122 (343)
T KOG2564|consen 51 EDVSIDGSDL-TFNVYLTLPS-----ATEGPILLLLHGGGSS--ALSFAIFASELKSKIRCRCLALDLRGHGETKVENED 122 (343)
T ss_pred cccccCCCcc-eEEEEEecCC-----CCCccEEEEeecCccc--chhHHHHHHHHHhhcceeEEEeeccccCccccCChh
Confidence 4555655555 4666554443 2457999999996433 34477777777764 566799999999986433222
Q ss_pred cccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC
Q 004368 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (758)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 616 (758)
+ .....-..||.+.++++-.. .+.+|.++||||||.++...+...
T Consensus 123 d---lS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~k 167 (343)
T KOG2564|consen 123 D---LSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAASK 167 (343)
T ss_pred h---cCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhhh
Confidence 1 23334468899888888654 457899999999999998777653
No 162
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.34 E-value=0.00036 Score=77.33 Aligned_cols=248 Identities=17% Similarity=0.152 Sum_probs=145.2
Q ss_pred EEeCcEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCCeEEEeeEEECCCCCEEEE
Q 004368 128 FRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAY 207 (758)
Q Consensus 128 ~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy 207 (758)
++.|.++-|+-..+|++...++.+...+ + +.+-|. +.. .....+.|++||+.+.|
T Consensus 132 Spdg~~la~~~s~~G~e~~~l~v~Dl~t------------------g-~~l~d~--i~~----~~~~~~~W~~d~~~~~y 186 (414)
T PF02897_consen 132 SPDGKRLAYSLSDGGSEWYTLRVFDLET------------------G-KFLPDG--IEN----PKFSSVSWSDDGKGFFY 186 (414)
T ss_dssp TTTSSEEEEEEEETTSSEEEEEEEETTT------------------T-EEEEEE--EEE----EESEEEEECTTSSEEEE
T ss_pred CCCCCEEEEEecCCCCceEEEEEEECCC------------------C-cCcCCc--ccc----cccceEEEeCCCCEEEE
Confidence 3568888889888888887777665532 2 333332 211 11223899999999999
Q ss_pred EEeCCCCe------EEEEEEEECCCCceeec-----cccCc-ceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCC---
Q 004368 208 AEDTKGDE------IYTVYVIDIETGTPVGK-----PLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD--- 271 (758)
Q Consensus 208 ~~~~~G~e------~~~l~v~dl~~g~~~~~-----~~~~~-~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~--- 271 (758)
+....... ..+|+.+.+.++..... ..... .-++.+|+|+ .++........ ...+|+.++..+
T Consensus 187 ~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~-~s~v~~~d~~~~~~~ 265 (414)
T PF02897_consen 187 TRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS-ESEVYLLDLDDGGSP 265 (414)
T ss_dssp EECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS-EEEEEEEECCCTTTS
T ss_pred EEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc-CCeEEEEeccccCCC
Confidence 98766544 78999999988754311 11222 3457889999 45444444333 468999999874
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecC-CcceEEEEEeCCCCC--ceE-Eeeccccceee-EEeecCCEEEEE
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE--ELR-VLTPRVVGVDT-AASHRGNHFFIT 346 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~-~~~~~l~~~d~~~~~--~~~-~l~~~~~~~~~-~~s~dg~~l~~~ 346 (758)
......+....+.... .+... |..+++.++. .....|+.+++++.. .++ .+.+...+... .++..+++|++.
T Consensus 266 ~~~~~~l~~~~~~~~~-~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~ 342 (414)
T PF02897_consen 266 DAKPKLLSPREDGVEY-YVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLS 342 (414)
T ss_dssp S-SEEEEEESSSS-EE-EEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEE
T ss_pred cCCcEEEeCCCCceEE-EEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEE
Confidence 2334445443333322 22222 5556666654 445789999998875 244 55555444333 377889999998
Q ss_pred EcCCCCCCcEEEEEeCC-CCCcceeeecCCCCceeeeEE--EeCCEEEEEEEeCCee-EEEEEEcC
Q 004368 347 RRSDELFNSELLACPVD-NTSETTVLIPHRESVKLQDIQ--LFIDHLAVYEREGGLQ-KITTYRLP 408 (758)
Q Consensus 347 s~~~~~~~~~L~~~~~~-~~~~~~~l~~~~~~~~~~~~~--~~~~~l~~~~~~~g~~-~l~v~~l~ 408 (758)
.+.++ ..+|.++++. + .....++......+.++. ...+.+.+.+..-..+ .++.|++.
T Consensus 343 ~~~~~--~~~l~v~~~~~~--~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~ 404 (414)
T PF02897_consen 343 YRENG--SSRLRVYDLDDG--KESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLA 404 (414)
T ss_dssp EEETT--EEEEEEEETT-T--EEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETT
T ss_pred EEECC--ccEEEEEECCCC--cEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 88863 5789999987 3 222222222222333443 3456777777665544 45556655
No 163
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.33 E-value=2.3e-05 Score=70.40 Aligned_cols=184 Identities=19% Similarity=0.238 Sum_probs=104.3
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCC--CCchhHHhcccccCCcChH-hHHHHHHHHHHHcCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGG--ELGRQWYENGKFLKKKNTF-TDFIACAEYLIKNCYC 592 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g--~~G~~~~~~~~~~~~~~~~-~D~~~~~~~l~~~~~~ 592 (758)
.-+||+.||.-....++.....+..|+.+|+.|+-+++.--- -+|.. +.-....+. ...+.++..|....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~r-----kPp~~~~t~~~~~~~~~aql~~~l-- 86 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRR-----KPPPGSGTLNPEYIVAIAQLRAGL-- 86 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCC-----CCcCccccCCHHHHHHHHHHHhcc--
Confidence 347788999766666665666677899999999999874110 11100 001111122 34455566666543
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCccccc
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNV 672 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i 672 (758)
+..++++-|.||||-++..++..----+.+.+|.. .|+. --|.|+. ++ ..++
T Consensus 87 ~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clg-------------YPfh-----ppGKPe~------~R----t~HL 138 (213)
T COG3571 87 AEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLG-------------YPFH-----PPGKPEQ------LR----TEHL 138 (213)
T ss_pred cCCceeeccccccchHHHHHHHhhcCCcceEEEec-------------CccC-----CCCCccc------ch----hhhc
Confidence 56789999999999988777664211122333211 1111 1133321 11 2345
Q ss_pred CCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCC-------ChHHHHHHHHHHHHHH
Q 004368 673 KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKS-------GRFERLREAAFTYTFL 743 (758)
Q Consensus 673 ~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-------~~~~~~~~~~~~~~fl 743 (758)
..+++| +||+||+.|+.=...+...+ ....+.+++++. ++.|-... ...+.++..+.+++=|
T Consensus 139 ~gl~tP-tli~qGtrD~fGtr~~Va~y-----~ls~~iev~wl~---~adHDLkp~k~vsgls~~~hL~~~A~~va~~ 207 (213)
T COG3571 139 TGLKTP-TLITQGTRDEFGTRDEVAGY-----ALSDPIEVVWLE---DADHDLKPRKLVSGLSTADHLKTLAEQVAGW 207 (213)
T ss_pred cCCCCC-eEEeecccccccCHHHHHhh-----hcCCceEEEEec---cCccccccccccccccHHHHHHHHHHHHHHH
Confidence 667898 99999999987554444221 123456778886 88885421 2234455555554433
No 164
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.33 E-value=1.8e-06 Score=83.08 Aligned_cols=217 Identities=15% Similarity=0.168 Sum_probs=112.5
Q ss_pred eeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCC-C-c--hhHHhc
Q 004368 491 ASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGE-L-G--RQWYEN 566 (758)
Q Consensus 491 ~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~-~-G--~~~~~~ 566 (758)
+.-.+|.+|.+|--.|+.. ...++|+||..-| |+..+ ..|...+.+|+.+||.|+-+|.--+-| + | .+|..
T Consensus 7 i~~~~~~~I~vwet~P~~~--~~~~~~tiliA~G-f~rrm-dh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm- 81 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNN--EPKRNNTILIAPG-FARRM-DHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM- 81 (294)
T ss_dssp EEETTTEEEEEEEE---TT--S---S-EEEEE-T-T-GGG-GGGHHHHHHHHTTT--EEEE---B-------------H-
T ss_pred eEcCCCCEEEEeccCCCCC--CcccCCeEEEecc-hhHHH-HHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch-
Confidence 4457899999998888864 4467899998877 66554 347888889999999999998643321 1 1 11111
Q ss_pred ccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccC---CCC-CC
Q 004368 567 GKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---DPT-IP 642 (758)
Q Consensus 567 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~---~~~-~~ 642 (758)
....+|+..+++||.+.|. .+++++-.|.-|-++..+++. ++ ..-.|..+|++|+..+.- ..+ +.
T Consensus 82 ------s~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~ 150 (294)
T PF02273_consen 82 ------SIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQ 150 (294)
T ss_dssp ------HHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGG
T ss_pred ------HHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhh
Confidence 0123789999999998774 679999999999999999995 54 677888889999766531 101 00
Q ss_pred CChhhhh---cc-CCCCCHHHH--HHHH-hc----CcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCc
Q 004368 643 LTTAEWE---EW-GDPWKEEFY--FYMK-SY----SPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDN 711 (758)
Q Consensus 643 ~~~~~~~---e~-g~p~~~~~~--~~l~-~~----sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~ 711 (758)
+...+.. .+ |.--+.+.| +.++ .+ |....++...+| ++..++.+|.-|...+..++...+... ..+
T Consensus 151 ~~i~~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP-~iaF~A~~D~WV~q~eV~~~~~~~~s~--~~k 227 (294)
T PF02273_consen 151 LPIEQLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIP-FIAFTANDDDWVKQSEVEELLDNINSN--KCK 227 (294)
T ss_dssp S-GGG--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S--EEEEEETT-TTS-HHHHHHHHTT-TT----EE
T ss_pred cchhhCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhCCCC-EEEEEeCCCccccHHHHHHHHHhcCCC--cee
Confidence 0000000 00 111111111 0011 11 334567777898 888899999988877666665544322 123
Q ss_pred eEEEEecCCCCCCCCCCh
Q 004368 712 ILLFKCELGAGHFSKSGR 729 (758)
Q Consensus 712 ~~~~~~~~~~gH~~~~~~ 729 (758)
++.+ +|++|-...+.
T Consensus 228 lysl---~Gs~HdL~enl 242 (294)
T PF02273_consen 228 LYSL---PGSSHDLGENL 242 (294)
T ss_dssp EEEE---TT-SS-TTSSH
T ss_pred EEEe---cCccchhhhCh
Confidence 3333 49999776553
No 165
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.31 E-value=2e-05 Score=87.19 Aligned_cols=85 Identities=16% Similarity=0.132 Sum_probs=61.9
Q ss_pred ChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhH----HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHH
Q 004368 535 NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTD----FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIG 610 (758)
Q Consensus 535 ~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D----~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~ 610 (758)
...+..|+++|+-|++++-|.-+...+. .+++| +.+|++.+.+. +..++|-++|+|+||.+++
T Consensus 237 ~SlVr~lv~qG~~VflIsW~nP~~~~r~-----------~~ldDYv~~i~~Ald~V~~~--tG~~~vnl~GyC~GGtl~a 303 (560)
T TIGR01839 237 KSFVQYCLKNQLQVFIISWRNPDKAHRE-----------WGLSTYVDALKEAVDAVRAI--TGSRDLNLLGACAGGLTCA 303 (560)
T ss_pred chHHHHHHHcCCeEEEEeCCCCChhhcC-----------CCHHHHHHHHHHHHHHHHHh--cCCCCeeEEEECcchHHHH
Confidence 4467899999999999999875543222 22344 44566665543 4568999999999999887
Q ss_pred H----HHhhCCC-ceeEEEEcCCccch
Q 004368 611 A----VLNMRPD-LFKAAVAAVPFVDV 632 (758)
Q Consensus 611 ~----~~~~~p~-~f~a~v~~~~~~d~ 632 (758)
. +++.+++ .++.+++.+..+|.
T Consensus 304 ~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 304 ALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHHHHHHhcCCCCceeeEEeeeccccc
Confidence 6 6677775 79998888777773
No 166
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.29 E-value=0.00051 Score=70.34 Aligned_cols=192 Identities=21% Similarity=0.215 Sum_probs=109.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cc-cCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
.+..+.|+|||++|+.... ...|+++++.+++.... .. ......+.|+|++ .++....+ ..++++++
T Consensus 11 ~i~~~~~~~~~~~l~~~~~-----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-----~~i~i~~~ 80 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSG-----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSD-----KTIRLWDL 80 (289)
T ss_pred CEEEEEEcCCCCEEEEeec-----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCC-----CeEEEEEc
Confidence 4778899999999987764 24789999988764432 11 1224468999999 55444332 24778888
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s 347 (758)
.++. ....+.... .....+.|+++++.++... ....|.++|+.+++....+......+. ..+++++..++..+
T Consensus 81 ~~~~--~~~~~~~~~-~~i~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 154 (289)
T cd00200 81 ETGE--CVRTLTGHT-SYVSSVAFSPDGRILSSSS---RDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS 154 (289)
T ss_pred Cccc--ceEEEeccC-CcEEEEEEcCCCCEEEEec---CCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc
Confidence 7642 233333222 2234678999977665543 234678888875542233332222233 33788766554433
Q ss_pred cCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcCC
Q 004368 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 348 ~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~l~~~~~~~g~~~l~v~~l~~ 409 (758)
.+ ..|..+++........+..+ ...+..+.+..+ .+++... ++ .+.+|++..
T Consensus 155 -~~----~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~-~~--~i~i~d~~~ 208 (289)
T cd00200 155 -QD----GTIKLWDLRTGKCVATLTGH--TGEVNSVAFSPDGEKLLSSSS-DG--TIKLWDLST 208 (289)
T ss_pred -CC----CcEEEEEccccccceeEecC--ccccceEEECCCcCEEEEecC-CC--cEEEEECCC
Confidence 22 35777777542222222222 223556666655 4544433 44 477888763
No 167
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.29 E-value=1e-05 Score=81.47 Aligned_cols=194 Identities=13% Similarity=0.057 Sum_probs=112.8
Q ss_pred eEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHc----CcEEEEEecCCCCCCchhHHhcccccCC
Q 004368 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR----GFIFAIAQIRGGGELGRQWYENGKFLKK 572 (758)
Q Consensus 497 ~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~~~RG~g~~G~~~~~~~~~~~~ 572 (758)
.+....++.|++. .+..++|+++..||-......+ -......|+.. .-+++.+|+----.....++ .
T Consensus 80 ~~~~~vv~lppgy-~~~~k~pvl~~~DG~~~~~~g~-i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-------~ 150 (299)
T COG2382 80 SERRRVVYLPPGY-NPLEKYPVLYLQDGQDWFRSGR-IPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-------C 150 (299)
T ss_pred cceeEEEEeCCCC-CccccccEEEEeccHHHHhcCC-hHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-------c
Confidence 3455667888887 7778999999999843322222 11223456555 46677776521111111111 1
Q ss_pred cChHhHHHH--HHHHHHHcC--CCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhh
Q 004368 573 KNTFTDFIA--CAEYLIKNC--YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEW 648 (758)
Q Consensus 573 ~~~~~D~~~--~~~~l~~~~--~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~ 648 (758)
...+.++++ .+=++.+.. .-++++-+++|.|+||+.++.++.++|++|..+++.+|.+++.-- + ..
T Consensus 151 n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~--~-~~------- 220 (299)
T COG2382 151 NEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPL--D-TQ------- 220 (299)
T ss_pred cHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCcc--c-cc-------
Confidence 111112111 122222221 236688999999999999999999999999999999998774321 1 00
Q ss_pred hccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 649 EEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 649 ~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
.++. .+...+-++-+..... -++...++.+...+ ..+.+++.|+..+.+...-.| .+||-.
T Consensus 221 ~~~~---------~~~~l~~~~a~~~~~~-~~l~~g~~~~~~~~--pNr~L~~~L~~~g~~~~yre~----~GgHdw 281 (299)
T COG2382 221 PQGE---------VAESLKILHAIGTDER-IVLTTGGEEGDFLR--PNRALAAQLEKKGIPYYYREY----PGGHDW 281 (299)
T ss_pred cccc---------hhhhhhhhhccCccce-EEeecCCccccccc--hhHHHHHHHHhcCCcceeeec----CCCCch
Confidence 1111 1112223333443333 36777677776666 457889999999987643333 349943
No 168
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=98.28 E-value=0.00013 Score=77.20 Aligned_cols=193 Identities=17% Similarity=0.255 Sum_probs=116.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-c----ccCcceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P----LVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~----~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
.+..+++||||++.|=+.. ...++++|=++|+.+-. . -.+.+..++||||+ +|+-.+.|. ..++|
T Consensus 192 FV~~VRysPDG~~Fat~gs-----Dgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk---t~KIW- 262 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAGS-----DGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK---TIKIW- 262 (603)
T ss_pred ceeeEEECCCCCeEEEecC-----CccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc---eEEEE-
Confidence 5678899999999874432 24799999999987642 1 12335568999999 776655443 23444
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFF 344 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 344 (758)
++.+..-....++...-....+++-|..| .|+..+. .+. |-+++.+.+..++.+..+...+.. .+++||++||
T Consensus 263 -dVs~~slv~t~~~~~~v~dqqvG~lWqkd--~lItVSl-~G~--in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~ 336 (603)
T KOG0318|consen 263 -DVSTNSLVSTWPMGSTVEDQQVGCLWQKD--HLITVSL-SGT--INYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY 336 (603)
T ss_pred -EeeccceEEEeecCCchhceEEEEEEeCC--eEEEEEc-CcE--EEEecccCCChhheecccccceeEEEEcCCCCEEE
Confidence 55554322333333332345667778844 3332222 222 345566655534455555455544 4899998776
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeC-CEEEEEEEeCCeeEEEEEEcC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~l~~~~~~~g~~~l~v~~l~ 408 (758)
-.+.+ +.|..++... +....+.+......+..+...+ +.++-...++. +++.++.
T Consensus 337 SgsyD-----G~I~~W~~~~-g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~---l~~~~~~ 392 (603)
T KOG0318|consen 337 SGSYD-----GHINSWDSGS-GTSDRLAGKGHTNQIKGMAASESGELFTIGWDDT---LRVISLK 392 (603)
T ss_pred eeccC-----ceEEEEecCC-ccccccccccccceEEEEeecCCCcEEEEecCCe---EEEEecc
Confidence 54332 5788888765 3344466666666777887776 66666666554 5556554
No 169
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.26 E-value=1.5e-05 Score=81.36 Aligned_cols=214 Identities=17% Similarity=0.160 Sum_probs=119.6
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHc-CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
.+.|.++.+||-.|+. ..|......|... |--|+.+|+|.+|.+... .........+|+...++..... +
T Consensus 50 ~~~Pp~i~lHGl~GS~--~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~h~~~~ma~dv~~Fi~~v~~~--~ 120 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK--ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TVHNYEAMAEDVKLFIDGVGGS--T 120 (315)
T ss_pred CCCCceEEecccccCC--CCHHHHHHHhcccccCceEEEecccCCCCccc-----cccCHHHHHHHHHHHHHHcccc--c
Confidence 5689999999977765 3355555566654 778999999999976532 1112223334555555444332 2
Q ss_pred CCCcEEEEEeChhH-HHHHHHHhhCCCceeEE-EEc-CC-ccc--------hhhccC--CCCC---C-------------
Q 004368 593 TKEKLCIEGRSAGG-LLIGAVLNMRPDLFKAA-VAA-VP-FVD--------VLTTML--DPTI---P------------- 642 (758)
Q Consensus 593 d~~~i~i~G~S~GG-~l~~~~~~~~p~~f~a~-v~~-~~-~~d--------~~~~~~--~~~~---~------------- 642 (758)
-..++.+.|||||| -++++....+|++..-+ |.. +| .+. .+..|. +... +
T Consensus 121 ~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~ 200 (315)
T KOG2382|consen 121 RLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG 200 (315)
T ss_pred ccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh
Confidence 34789999999999 55566666678765433 332 33 111 111111 1110 0
Q ss_pred --CChhhh-------------hcc-CCC-CCHHHHHHHHhcCccccc--CCCCCCeEEEeccCCCCCCCChHHHHHHHHH
Q 004368 643 --LTTAEW-------------EEW-GDP-WKEEFYFYMKSYSPVDNV--KAQNYPHILVTAGLNDPRVMYSEPAKFVAKL 703 (758)
Q Consensus 643 --~~~~~~-------------~e~-g~p-~~~~~~~~l~~~sp~~~i--~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L 703 (758)
.....| ..| ++. ...+.+..++..+.-..+ .....| +|+++|.++..|+-.+-..+.
T Consensus 201 ~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~p-vlfi~g~~S~fv~~~~~~~~~--- 276 (315)
T KOG2382|consen 201 FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGP-VLFIKGLQSKFVPDEHYPRME--- 276 (315)
T ss_pred cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccc-eeEEecCCCCCcChhHHHHHH---
Confidence 000000 011 111 122333332233333223 333666 999999999999976554443
Q ss_pred HhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 004368 704 REMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRA 746 (758)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 746 (758)
..-..+++..++ ++||....+.++.+-+. +..|+.++
T Consensus 277 -~~fp~~e~~~ld---~aGHwVh~E~P~~~~~~--i~~Fl~~~ 313 (315)
T KOG2382|consen 277 -KIFPNVEVHELD---EAGHWVHLEKPEEFIES--ISEFLEEP 313 (315)
T ss_pred -Hhccchheeecc---cCCceeecCCHHHHHHH--HHHHhccc
Confidence 333335666775 79999877777766654 45577654
No 170
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.26 E-value=0.00011 Score=77.24 Aligned_cols=174 Identities=11% Similarity=0.157 Sum_probs=94.7
Q ss_pred CceEEeecccccCCCCeEEEeeEEECC-CCCEEEEEEeCCCCeE-EEEEEEECCCCceeecc--ccC-cceeEEEecCC-
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSP-DNKLVAYAEDTKGDEI-YTVYVIDIETGTPVGKP--LVG-VTASVEWAGNE- 247 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SP-DG~~lAy~~~~~G~e~-~~l~v~dl~~g~~~~~~--~~~-~~~~~~wspDg- 247 (758)
..++|++.+. .++.+.+|| |...|+|--....... ..||+++.+++...... .++ ..+.=-|+|||
T Consensus 179 ~~~~v~~~~~--------wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~ 250 (386)
T PF14583_consen 179 ERKVVFEDTD--------WLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGS 250 (386)
T ss_dssp -EEEEEEESS---------EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS
T ss_pred ceeEEEecCc--------cccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCC
Confidence 4566665443 456778888 7788888765444432 47999999887766541 122 23445799999
Q ss_pred eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCC-------------cceEEEEE
Q 004368 248 ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-------------ITRFVFYL 314 (758)
Q Consensus 248 ~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~-------------~~~~l~~~ 314 (758)
.|+|..........-|..+++.++. ...+.+.+ ....+..++||+.++--..+. +..-||++
T Consensus 251 ~i~y~~~~~~~~~~~i~~~d~~t~~--~~~~~~~p---~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~ 325 (386)
T PF14583_consen 251 TIWYDSYTPGGQDFWIAGYDPDTGE--RRRLMEMP---WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLF 325 (386)
T ss_dssp -EEEEEEETTT--EEEEEE-TTT----EEEEEEE----SEEEEEE-TTSSEEEEEE-------------------EEEEE
T ss_pred EEEEEeecCCCCceEEEeeCCCCCC--ceEEEeCC---ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEe
Confidence 8999887555555567778887763 34444332 233456789999765433221 12367888
Q ss_pred eCCCCCceEEeeccc------------cceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCC
Q 004368 315 DVSKPEELRVLTPRV------------VGVDTAASHRGNHFFITRRSDELFNSELLACPVD 363 (758)
Q Consensus 315 d~~~~~~~~~l~~~~------------~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~ 363 (758)
++.++. ...|.... ......|||||++++|.+|..|. ..||.+++.
T Consensus 326 ~~~~~~-~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~--~~vY~v~i~ 383 (386)
T PF14583_consen 326 DVEAGR-FRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGP--PAVYLVEIP 383 (386)
T ss_dssp ETTTTE-EEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS---EEEEEE--
T ss_pred ccccCc-eeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCC--ccEEEEeCc
Confidence 888765 44333221 01123599999999999999753 578988874
No 171
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.26 E-value=0.00021 Score=79.82 Aligned_cols=197 Identities=17% Similarity=0.157 Sum_probs=113.0
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECC-CCceeeccccC---cceeEEEecCCeEEEEEeCCCCCCceEEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-TGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWL 265 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~-~g~~~~~~~~~---~~~~~~wspDg~l~y~~~~~~~~~~~v~~ 265 (758)
...+..+.|||||++|+= ++...+|+|||+. .+..+. ++.+ ....+.|+|+|.++.....+. .+++
T Consensus 203 ~~~v~~~~fs~d~~~l~s-----~s~D~tiriwd~~~~~~~~~-~l~gH~~~v~~~~f~p~g~~i~Sgs~D~----tvri 272 (456)
T KOG0266|consen 203 TRGVSDVAFSPDGSYLLS-----GSDDKTLRIWDLKDDGRNLK-TLKGHSTYVTSVAFSPDGNLLVSGSDDG----TVRI 272 (456)
T ss_pred ccceeeeEECCCCcEEEE-----ecCCceEEEeeccCCCeEEE-EecCCCCceEEEEecCCCCEEEEecCCC----cEEE
Confidence 357889999999997763 4446799999994 444443 3332 256789999995444443322 3777
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCc--eEEeeccccc--ee-eEEeecC
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE--LRVLTPRVVG--VD-TAASHRG 340 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~--~~~l~~~~~~--~~-~~~s~dg 340 (758)
+++.++ +-...+..... ....+++++||++|+..+. ...|.++|+.++.. ...+...... +. ..++|+|
T Consensus 273 Wd~~~~--~~~~~l~~hs~-~is~~~f~~d~~~l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~ 346 (456)
T KOG0266|consen 273 WDVRTG--ECVRKLKGHSD-GISGLAFSPDGNLLVSASY---DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNG 346 (456)
T ss_pred EeccCC--eEEEeeeccCC-ceEEEEECCCCCEEEEcCC---CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCC
Confidence 788875 34445544433 3346789999999876532 45577888887651 1233333322 12 2389999
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCC-ceeeeEEEe-CCEEEEEEEeCCeeEEEEEEcCC
Q 004368 341 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLF-IDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 341 ~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~-~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
++++..+.+ ..|..+++...........+... .-+-.+... +...++....++. +.+|++..
T Consensus 347 ~~ll~~~~d-----~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~--v~~~~~~s 410 (456)
T KOG0266|consen 347 KYLLSASLD-----RTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGS--VYVWDSSS 410 (456)
T ss_pred cEEEEecCC-----CeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCce--EEEEeCCc
Confidence 977766543 34555566542222222233222 111122212 3344445555554 66787764
No 172
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=98.25 E-value=1.9e-05 Score=81.37 Aligned_cols=181 Identities=19% Similarity=0.116 Sum_probs=104.5
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc---ccCcceeEEEecCCeEEEEEeCCCCCCceEEEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP---LVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~---~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~ 267 (758)
..++.++|.|+|++|+=+ +-..+.++||+.+++.+... ..+ ..+++|-|||.++-+..-+. -.+|| +
T Consensus 262 ~RVs~VafHPsG~~L~Ta-----sfD~tWRlWD~~tk~ElL~QEGHs~~-v~~iaf~~DGSL~~tGGlD~--~~RvW--D 331 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTA-----SFDSTWRLWDLETKSELLLQEGHSKG-VFSIAFQPDGSLAATGGLDS--LGRVW--D 331 (459)
T ss_pred hhheeeeecCCCceeeec-----ccccchhhcccccchhhHhhcccccc-cceeEecCCCceeeccCccc--hhhee--e
Confidence 578899999999999843 33567899999998875421 222 45599999998877654221 11244 6
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEE
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFIT 346 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~ 346 (758)
+.++ .-++.+++ ...-.++++|||+|-.|+- .+..++-+||-+ .....+-.+.....-+.- -++|+++.+++.
T Consensus 332 lRtg--r~im~L~g-H~k~I~~V~fsPNGy~lAT-gs~Dnt~kVWDL--R~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~T 405 (459)
T KOG0272|consen 332 LRTG--RCIMFLAG-HIKEILSVAFSPNGYHLAT-GSSDNTCKVWDL--RMRSELYTIPAHSNLVSQVKYSPQEGYFLVT 405 (459)
T ss_pred cccC--cEEEEecc-cccceeeEeECCCceEEee-cCCCCcEEEeee--cccccceecccccchhhheEecccCCeEEEE
Confidence 7776 45666665 3334558999999977654 444455666644 333222222222222222 277866666665
Q ss_pred EcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEE
Q 004368 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA 391 (758)
Q Consensus 347 s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 391 (758)
...+ ...+|+..+ +....+.+..+...+.-.+++.+++.++
T Consensus 406 asyD--~t~kiWs~~--~~~~~ksLaGHe~kV~s~Dis~d~~~i~ 446 (459)
T KOG0272|consen 406 ASYD--NTVKIWSTR--TWSPLKSLAGHEGKVISLDISPDSQAIA 446 (459)
T ss_pred cccC--cceeeecCC--CcccchhhcCCccceEEEEeccCCceEE
Confidence 5554 235565432 2122223555655444344444444454
No 173
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.25 E-value=5.2e-06 Score=90.07 Aligned_cols=112 Identities=8% Similarity=-0.014 Sum_probs=76.0
Q ss_pred CCCCEEEEecCCCccCCCCCCCh-HHHHHHH--cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNS-SRLSLLD--RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~--~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (758)
...|++|++||-........|.. ....|+. ..+.|+++|.+|++.... ..+. ..-...-+++.+.+++|.++.
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y--~~a~--~~t~~vg~~la~lI~~L~~~~ 114 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHY--PTSA--AYTKLVGKDVAKFVNWMQEEF 114 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCC--cccc--ccHHHHHHHHHHHHHHHHHhh
Confidence 45689999999544322223444 2334543 269999999999875321 1111 111122245666778876654
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 591 YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 591 ~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
..+.+++-++|+|+||.+++.++.+.|+++..+++..|.
T Consensus 115 gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 115 NYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 467899999999999999999999999999988887763
No 174
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.24 E-value=2.6e-05 Score=80.73 Aligned_cols=204 Identities=18% Similarity=0.167 Sum_probs=117.8
Q ss_pred CCCEEEEecCCCccCCCCCCC-----hHHHHHHH-------cCcEEEEEecCCCC--CCchh-HHhcccc---cCCcChH
Q 004368 515 SDPLLLYGYGSYEICNDPAFN-----SSRLSLLD-------RGFIFAIAQIRGGG--ELGRQ-WYENGKF---LKKKNTF 576 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~-----~~~~~l~~-------~G~~v~~~~~RG~g--~~G~~-~~~~~~~---~~~~~~~ 576 (758)
+..+||++||-.|.+...... ..+..++- .-|-|++.|+-|+. ..|.. ....|+. .....++
T Consensus 50 ~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti 129 (368)
T COG2021 50 KDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITI 129 (368)
T ss_pred CCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccH
Confidence 467899999855532211110 12333333 34889999998865 22222 1111111 1123678
Q ss_pred hHHHHHHHHHHHcCCCCCCcEE-EEEeChhHHHHHHHHhhCCCceeEEEEcCCccc----------hhh--ccCCCC---
Q 004368 577 TDFIACAEYLIKNCYCTKEKLC-IEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD----------VLT--TMLDPT--- 640 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d----------~~~--~~~~~~--- 640 (758)
.|.+.+-+.|++.=.+ ++|. ++|+||||+.++..+..+||..+.+|..+.-.- +.+ -+.++.
T Consensus 130 ~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~ 207 (368)
T COG2021 130 RDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNG 207 (368)
T ss_pred HHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccC
Confidence 8999988887666333 4554 999999999999999999998776665544211 000 001111
Q ss_pred -------CC---------------CChhhh-hccCC-----C------------------------CCHHHHH----HHH
Q 004368 641 -------IP---------------LTTAEW-EEWGD-----P------------------------WKEEFYF----YMK 664 (758)
Q Consensus 641 -------~~---------------~~~~~~-~e~g~-----p------------------------~~~~~~~----~l~ 664 (758)
.| ....+| ..||. + -|+..|- .|.
T Consensus 208 G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald 287 (368)
T COG2021 208 GDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALD 287 (368)
T ss_pred CCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 11 011111 12332 0 0111111 112
Q ss_pred hcCcccc-------cCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Q 004368 665 SYSPVDN-------VKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 726 (758)
Q Consensus 665 ~~sp~~~-------i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 726 (758)
.++|-.. +++++.| +|++.-+.|-..|+.+.++.++.|...+. +..++ ...||-..
T Consensus 288 ~~D~s~~~~~l~~al~~i~~~-~lv~gi~sD~lfp~~~~~~~~~~L~~~~~---~~~i~--S~~GHDaF 350 (368)
T COG2021 288 YHDVSRGRGDLTAALARIKAP-VLVVGITSDWLFPPELQRALAEALPAAGA---LREID--SPYGHDAF 350 (368)
T ss_pred hcCCCCCcCcHHHHHhcCccC-EEEEEecccccCCHHHHHHHHHhccccCc---eEEec--CCCCchhh
Confidence 2333222 5567888 99999999999999999999999998875 44444 57799654
No 175
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.23 E-value=0.00094 Score=71.90 Aligned_cols=259 Identities=17% Similarity=0.167 Sum_probs=127.1
Q ss_pred EeeEEECCCCCEEEEEEeCC--CCeEEEEEEEECCCCceeec-cc--cCc-ceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTK--GDEIYTVYVIDIETGTPVGK-PL--VGV-TASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~--G~e~~~l~v~dl~~g~~~~~-~~--~~~-~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
.+.+.+|||+++| |+.... .......+-++-++|+.... .. .+. .-.++.+||++++|++.-.. ..|..+
T Consensus 39 Ps~l~~~~~~~~L-Y~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~---g~v~v~ 114 (345)
T PF10282_consen 39 PSWLAVSPDGRRL-YVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGG---GSVSVF 114 (345)
T ss_dssp ECCEEE-TTSSEE-EEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTT---TEEEEE
T ss_pred CceEEEEeCCCEE-EEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccC---CeEEEE
Confidence 3567889999887 555443 22234455555555665543 22 222 23467889996667765332 247777
Q ss_pred EcCCCCCCcEE--Ee--e--ecC-----CceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEE---e-ecccc
Q 004368 267 KLEADQSNDIC--LY--H--EKD-----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRV---L-TPRVV 330 (758)
Q Consensus 267 ~l~~~~~~~~~--v~--~--~~~-----~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~---l-~~~~~ 330 (758)
++.....-... ++ + ..+ ......+.++|||+++++.... ...|++++++... .+.. + .+...
T Consensus 115 ~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG--~D~v~~~~~~~~~~~l~~~~~~~~~~G~ 192 (345)
T PF10282_consen 115 PLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG--ADRVYVYDIDDDTGKLTPVDSIKVPPGS 192 (345)
T ss_dssp EECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT--TTEEEEEEE-TTS-TEEEEEEEECSTTS
T ss_pred EccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC--CCEEEEEEEeCCCceEEEeeccccccCC
Confidence 77654211111 11 1 111 1222357799999999876543 3456666655432 1322 1 11112
Q ss_pred c-eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCC-CCccee-----eecCCC--CceeeeEEEe--CCEEEEEEEeCCe
Q 004368 331 G-VDTAASHRGNHFFITRRSDELFNSELLACPVDN-TSETTV-----LIPHRE--SVKLQDIQLF--IDHLAVYEREGGL 399 (758)
Q Consensus 331 ~-~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~-~~~~~~-----l~~~~~--~~~~~~~~~~--~~~l~~~~~~~g~ 399 (758)
+ ....|+|+|+++|++.... ..|..++++. .+..+. .++... .....++.+. +++||+. ..+.
T Consensus 193 GPRh~~f~pdg~~~Yv~~e~s----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvs--nr~~ 266 (345)
T PF10282_consen 193 GPRHLAFSPDGKYAYVVNELS----NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVS--NRGS 266 (345)
T ss_dssp SEEEEEE-TTSSEEEEEETTT----TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEE--ECTT
T ss_pred CCcEEEEcCCcCEEEEecCCC----CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEE--eccC
Confidence 2 2345999999888876554 3455544441 122111 222211 1123455555 5555544 3445
Q ss_pred eEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEE
Q 004368 400 QKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVL 469 (758)
Q Consensus 400 ~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~ 469 (758)
..|.+++++..++.++.+ ..+.. .+-.-..+..+++++.+++. .....--.+|.+|.++|....
T Consensus 267 ~sI~vf~~d~~~g~l~~~---~~~~~--~G~~Pr~~~~s~~g~~l~Va-~~~s~~v~vf~~d~~tG~l~~ 330 (345)
T PF10282_consen 267 NSISVFDLDPATGTLTLV---QTVPT--GGKFPRHFAFSPDGRYLYVA-NQDSNTVSVFDIDPDTGKLTP 330 (345)
T ss_dssp TEEEEEEECTTTTTEEEE---EEEEE--SSSSEEEEEE-TTSSEEEEE-ETTTTEEEEEEEETTTTEEEE
T ss_pred CEEEEEEEecCCCceEEE---EEEeC--CCCCccEEEEeCCCCEEEEE-ecCCCeEEEEEEeCCCCcEEE
Confidence 668899996443333211 11111 00001224456777766543 333334567788888888443
No 176
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.23 E-value=0.0016 Score=70.21 Aligned_cols=203 Identities=16% Similarity=0.208 Sum_probs=103.0
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCC-Cceeec--cc------------cC-cceeEEEecCCeEEEEEeCCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK--PL------------VG-VTASVEWAGNEALVYITMDEIL 258 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~-g~~~~~--~~------------~~-~~~~~~wspDg~l~y~~~~~~~ 258 (758)
.+.++|||++|..+.-.+| .+.+++++. |..... .. .. ....+.|+|||+++|+..-.
T Consensus 91 ~i~~~~~g~~l~vany~~g----~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG-- 164 (345)
T PF10282_consen 91 HIAVDPDGRFLYVANYGGG----SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG-- 164 (345)
T ss_dssp EEEECTTSSEEEEEETTTT----EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT--
T ss_pred EEEEecCCCEEEEEEccCC----eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC--
Confidence 4589999999865544344 467777765 443321 11 01 12358999999666776533
Q ss_pred CCceEEEEEcCCCCCCcEE--EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEE---eecc---cc
Q 004368 259 RPDKAWLHKLEADQSNDIC--LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPR---VV 330 (758)
Q Consensus 259 ~~~~v~~~~l~~~~~~~~~--v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~---l~~~---~~ 330 (758)
..+|+.+++.....+-.. ...-+...---.+.++|||+++++.......-.++.++..++. ++. +... ..
T Consensus 165 -~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~ 242 (345)
T PF10282_consen 165 -ADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGS-LTEIQTISTLPEGFT 242 (345)
T ss_dssp -TTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTE-EEEEEEEESCETTSC
T ss_pred -CCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCc-eeEEEEeeecccccc
Confidence 235888888765321111 1111111111246799999999886654444444555533443 322 1111 11
Q ss_pred ----ceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCC-Cccee--eecCCCCceeeeEEE--eCCEEEEEEEeCCeeE
Q 004368 331 ----GVDTAASHRGNHFFITRRSDELFNSELLACPVDNT-SETTV--LIPHRESVKLQDIQL--FIDHLAVYEREGGLQK 401 (758)
Q Consensus 331 ----~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~-~~~~~--l~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~ 401 (758)
.....++|||++||+ +|+. . ..|..++++.. +..+. .++.. .....++.+ ++++|++..... ..
T Consensus 243 ~~~~~~~i~ispdg~~lyv-snr~-~--~sI~vf~~d~~~g~l~~~~~~~~~-G~~Pr~~~~s~~g~~l~Va~~~s--~~ 315 (345)
T PF10282_consen 243 GENAPAEIAISPDGRFLYV-SNRG-S--NSISVFDLDPATGTLTLVQTVPTG-GKFPRHFAFSPDGRYLYVANQDS--NT 315 (345)
T ss_dssp SSSSEEEEEE-TTSSEEEE-EECT-T--TEEEEEEECTTTTTEEEEEEEEES-SSSEEEEEE-TTSSEEEEEETTT--TE
T ss_pred ccCCceeEEEecCCCEEEE-Eecc-C--CEEEEEEEecCCCceEEEEEEeCC-CCCccEEEEeCCCCEEEEEecCC--Ce
Confidence 122348999997766 5554 2 34555555321 22222 23322 223566666 556666544333 34
Q ss_pred EEEEEcCCCCC
Q 004368 402 ITTYRLPAVGE 412 (758)
Q Consensus 402 l~v~~l~~~g~ 412 (758)
+.+++++..++
T Consensus 316 v~vf~~d~~tG 326 (345)
T PF10282_consen 316 VSVFDIDPDTG 326 (345)
T ss_dssp EEEEEEETTTT
T ss_pred EEEEEEeCCCC
Confidence 77888874443
No 177
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.22 E-value=0.0013 Score=67.13 Aligned_cols=222 Identities=15% Similarity=0.154 Sum_probs=121.8
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEe-cCCeEEEEEeCCCCCCceEEEEEcCCCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWA-GNEALVYITMDEILRPDKAWLHKLEADQS 273 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~ws-pDg~l~y~~~~~~~~~~~v~~~~l~~~~~ 273 (758)
++.|.++...|.|+ |..+ .+|+.++.++++......+. ..+++.. +||.++...... +.+.++.++
T Consensus 4 gp~~d~~~g~l~~~-D~~~---~~i~~~~~~~~~~~~~~~~~-~~G~~~~~~~g~l~v~~~~~------~~~~d~~~g-- 70 (246)
T PF08450_consen 4 GPVWDPRDGRLYWV-DIPG---GRIYRVDPDTGEVEVIDLPG-PNGMAFDRPDGRLYVADSGG------IAVVDPDTG-- 70 (246)
T ss_dssp EEEEETTTTEEEEE-ETTT---TEEEEEETTTTEEEEEESSS-EEEEEEECTTSEEEEEETTC------EEEEETTTT--
T ss_pred ceEEECCCCEEEEE-EcCC---CEEEEEECCCCeEEEEecCC-CceEEEEccCCEEEEEEcCc------eEEEecCCC--
Confidence 67888866666444 4444 37999999998876544444 3446666 677776654321 444477665
Q ss_pred CcEEEeeec-C--C-ceeeEEEEcCCCcEEEEEecCCc----c--eEEEEEeCCCCCceEEeeccccce-eeEEeecCCE
Q 004368 274 NDICLYHEK-D--D-IYSLGLQASESKKFLFIASESKI----T--RFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNH 342 (758)
Q Consensus 274 ~~~~v~~~~-~--~-~~~~~~~~S~Dg~~l~~~s~~~~----~--~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~ 342 (758)
+-..+.... . + ...-++.+.+||+ |+++..... . ..||+++.+ ++ .+.+....... ...|+|||+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~-~~~~~~~~~~pNGi~~s~dg~~ 147 (246)
T PF08450_consen 71 KVTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GK-VTVVADGLGFPNGIAFSPDGKT 147 (246)
T ss_dssp EEEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SE-EEEEEEEESSEEEEEEETTSSE
T ss_pred cEEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-Ce-EEEEecCcccccceEECCcchh
Confidence 233344332 1 1 2233578999998 666553321 1 679999998 54 44443332211 2348999998
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCc----ceeeecCCCC-ceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCCCCCcccc
Q 004368 343 FFITRRSDELFNSELLACPVDNTSE----TTVLIPHRES-VKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKS 416 (758)
Q Consensus 343 l~~~s~~~~~~~~~L~~~~~~~~~~----~~~l~~~~~~-~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~~g~~~~~ 416 (758)
||+.... +.+|++++++..+. .+.+...... ..+.++.++.+ .|++.....+ .|.+++.+ |+.+
T Consensus 148 lyv~ds~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~--~I~~~~p~--G~~~-- 217 (246)
T PF08450_consen 148 LYVADSF----NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGG--RIVVFDPD--GKLL-- 217 (246)
T ss_dssp EEEEETT----TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTT--EEEEEETT--SCEE--
T ss_pred eeecccc----cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCC--EEEEECCC--ccEE--
Confidence 8886443 36799998864222 1223222222 24678888875 5554444333 57777665 6643
Q ss_pred ccCCceeeccCcccccCCCCc-ccCCcEEEEEE
Q 004368 417 LQGGKSVEFIDPVYSIDPSES-VFSSRILRFHY 448 (758)
Q Consensus 417 l~~~~~i~~p~~~~~i~~~~~-~~d~~~l~~~~ 448 (758)
..+.+|.+ .+....+ -++.++++++.
T Consensus 218 ----~~i~~p~~--~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 218 ----REIELPVP--RPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp ----EEEE-SSS--SEEEEEEESTTSSEEEEEE
T ss_pred ----EEEcCCCC--CEEEEEEECCCCCEEEEEe
Confidence 44555522 1111111 23556676654
No 178
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.22 E-value=2.3e-05 Score=79.63 Aligned_cols=100 Identities=19% Similarity=0.158 Sum_probs=65.0
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHc--CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDR--GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
.|.++++||.++...... .....+... .|.++.+|.||+|... .. .........-++.+.+.-..
T Consensus 21 ~~~i~~~hg~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~g~g~s~----~~------~~~~~~~~~~~~~~~~~~~~- 87 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR--PVFKVLPALAARYRVIAPDLRGHGRSD----PA------GYSLSAYADDLAALLDALGL- 87 (282)
T ss_pred CCeEEEeCCCCCchhhhH--HHHHHhhccccceEEEEecccCCCCCC----cc------cccHHHHHHHHHHHHHHhCC-
Confidence 568999999876554432 222222221 1999999999988765 00 11112223333333332222
Q ss_pred CCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF 629 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~ 629 (758)
.++.++|+|+||.++..++.++|+.++++|+..+.
T Consensus 88 -~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~ 122 (282)
T COG0596 88 -EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPA 122 (282)
T ss_pred -CceEEEEecccHHHHHHHHHhcchhhheeeEecCC
Confidence 34999999999999999999999999999888754
No 179
>PTZ00421 coronin; Provisional
Probab=98.19 E-value=0.00041 Score=77.67 Aligned_cols=199 Identities=9% Similarity=0.021 Sum_probs=111.2
Q ss_pred EEeeEEECC-CCCEEEEEEeCCCCeEEEEEEEECCCCcee-----ec-ccc---CcceeEEEecCC-eEEEEEeCCCCCC
Q 004368 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GK-PLV---GVTASVEWAGNE-ALVYITMDEILRP 260 (758)
Q Consensus 192 ~i~~~~~SP-DG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-----~~-~~~---~~~~~~~wspDg-~l~y~~~~~~~~~ 260 (758)
.+..+.||| |+++||-... ...|++||+.++... .. .+. ..+..++|+|++ .++.+...+
T Consensus 77 ~V~~v~fsP~d~~~LaSgS~-----DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D---- 147 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTASE-----DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD---- 147 (493)
T ss_pred CEEEEEEcCCCCCEEEEEeC-----CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC----
Confidence 477889999 8888875443 347999999765321 00 222 225668999997 666665432
Q ss_pred ceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc--eeeEEee
Q 004368 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG--VDTAASH 338 (758)
Q Consensus 261 ~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~--~~~~~s~ 338 (758)
..|.++++.++. ....+... .....++.|+|||+.|+..+.+ ..|.++|+.+++....+...... ....|.+
T Consensus 148 gtVrIWDl~tg~--~~~~l~~h-~~~V~sla~spdG~lLatgs~D---g~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~ 221 (493)
T PTZ00421 148 MVVNVWDVERGK--AVEVIKCH-SDQITSLEWNLDGSLLCTTSKD---KKLNIIDPRDGTIVSSVEAHASAKSQRCLWAK 221 (493)
T ss_pred CEEEEEECCCCe--EEEEEcCC-CCceEEEEEECCCCEEEEecCC---CEEEEEECCCCcEEEEEecCCCCcceEEEEcC
Confidence 247788887662 33333322 2234578899999987654432 34778888876522233322221 1234777
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCC--CceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+++.++...... .....|..+|+............+. ...+..++.+++.+++....++ .|++|++.
T Consensus 222 ~~~~ivt~G~s~-s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg--~Iriwdl~ 290 (493)
T PTZ00421 222 RKDLIITLGCSK-SQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEG--NIRCFELM 290 (493)
T ss_pred CCCeEEEEecCC-CCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCC--eEEEEEee
Confidence 777665443221 2245677788765322211221111 1122234444555555544344 47788886
No 180
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.18 E-value=0.00062 Score=72.05 Aligned_cols=192 Identities=13% Similarity=0.118 Sum_probs=101.0
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEE--------ecCCeEEEEEeCCCCCCceEEE
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEW--------AGNEALVYITMDEILRPDKAWL 265 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~w--------spDg~l~y~~~~~~~~~~~v~~ 265 (758)
.+.+|||||+|.+. +... ...+-|+|+++++.+.. ..+++..-+.+ +.||++.+++.+..+. +..
T Consensus 109 ~~~ls~dgk~l~V~-n~~p--~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~---~~~ 182 (352)
T TIGR02658 109 MTSLTPDNKTLLFY-QFSP--SPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGN---PKI 182 (352)
T ss_pred eEEECCCCCEEEEe-cCCC--CCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCc---eEE
Confidence 67899999997543 3332 25789999999998864 55555433444 4555443444433322 111
Q ss_pred EEcCCCCCCcEEEeee-cCCceeeEEEEcC-CCcEEEEEecCCcceEEEEEeCCCCC-----ceEEeecc-------ccc
Q 004368 266 HKLEADQSNDICLYHE-KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPR-------VVG 331 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~-~~~~~~~~~~~S~-Dg~~l~~~s~~~~~~~l~~~d~~~~~-----~~~~l~~~-------~~~ 331 (758)
. ...+|.. .++- +..+.+++ ||++++++.. ..|+.+|+.+.+ .+..++.. ..+
T Consensus 183 ~--------~~~vf~~~~~~v-~~rP~~~~~dg~~~~vs~e----G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g 249 (352)
T TIGR02658 183 K--------PTEVFHPEDEYL-INHPAYSNKSGRLVWPTYT----GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGG 249 (352)
T ss_pred e--------eeeeecCCcccc-ccCCceEcCCCcEEEEecC----CeEEEEecCCCcceecceeeeccccccccccCCCc
Confidence 1 1112221 1111 11122345 9988877554 678999976543 12222211 112
Q ss_pred ee-eEEeecCCEEEEEEcCCC-----CCCcEEEEEeCCCCCcceeeecCCCCceeeeEEE--eCCEEEEEEEeCCeeEEE
Q 004368 332 VD-TAASHRGNHFFITRRSDE-----LFNSELLACPVDNTSETTVLIPHRESVKLQDIQL--FIDHLAVYEREGGLQKIT 403 (758)
Q Consensus 332 ~~-~~~s~dg~~l~~~s~~~~-----~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~l~ 403 (758)
.+ ..++++|+++|++.+... .+..+|..+|..+..... .++-.. ...++.+ +++.+++..+ .....+.
T Consensus 250 ~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~-~i~vG~--~~~~iavS~Dgkp~lyvtn-~~s~~Vs 325 (352)
T TIGR02658 250 WQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLR-KIELGH--EIDSINVSQDAKPLLYALS-TGDKTLY 325 (352)
T ss_pred ceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEE-EEeCCC--ceeeEEECCCCCeEEEEeC-CCCCcEE
Confidence 22 248899999999764321 123589999987632222 222222 2344444 4452333333 2334477
Q ss_pred EEEcCC
Q 004368 404 TYRLPA 409 (758)
Q Consensus 404 v~~l~~ 409 (758)
+++...
T Consensus 326 ViD~~t 331 (352)
T TIGR02658 326 IFDAET 331 (352)
T ss_pred EEECcC
Confidence 888763
No 181
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.17 E-value=1.3e-05 Score=80.52 Aligned_cols=133 Identities=20% Similarity=0.219 Sum_probs=95.3
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCCh-HHHHHHHcCcEEEEEecCCCCCC-chhHH
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGEL-GRQWY 564 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~-G~~~~ 564 (758)
++.++++.||.+|...++-.+.. ..+...-+|+..-|.-|. |.. .+..=++.||.|+..|.+|-+|+ |..+
T Consensus 215 ~R~kiks~dgneiDtmF~d~r~n-~~~ngq~LvIC~EGNAGF-----YEvG~m~tP~~lgYsvLGwNhPGFagSTG~P~- 287 (517)
T KOG1553|consen 215 QRLKIKSSDGNEIDTMFLDGRPN-QSGNGQDLVICFEGNAGF-----YEVGVMNTPAQLGYSVLGWNHPGFAGSTGLPY- 287 (517)
T ss_pred eEEEEeecCCcchhheeecCCCC-CCCCCceEEEEecCCccc-----eEeeeecChHHhCceeeccCCCCccccCCCCC-
Confidence 78899999999998876665433 222223566666663221 111 11233567999999999996554 3322
Q ss_pred hcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh
Q 004368 565 ENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 634 (758)
Q Consensus 565 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~ 634 (758)
-.|+..-..+++++.+..=...++.|.++|+|-||+-+++++..+|| ++|+|+.+-|-|++-
T Consensus 288 -------p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFDDllp 349 (517)
T KOG1553|consen 288 -------PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFDDLLP 349 (517)
T ss_pred -------cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchhhhhh
Confidence 23555666778888887755678999999999999999999999997 699999999988654
No 182
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=98.16 E-value=0.0035 Score=67.72 Aligned_cols=255 Identities=15% Similarity=0.106 Sum_probs=122.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
.....+||||+++ |..+++| .|.++|+.+++.... .......++++|+||+.+|++.-. +..+...+..+.
T Consensus 39 h~~~~~s~Dgr~~-yv~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~---~~~v~v~D~~tl 110 (369)
T PF02239_consen 39 HAGLKFSPDGRYL-YVANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYE---PGTVSVIDAETL 110 (369)
T ss_dssp EEEEE-TT-SSEE-EEEETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEE---TTEEEEEETTT-
T ss_pred eeEEEecCCCCEE-EEEcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecC---CCceeEeccccc
Confidence 3456789999985 5556655 589999999997753 333335669999999655665422 235777777665
Q ss_pred CCCcEEEeeecC----CceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCce--EEeeccccceeeEEeecCCEEEE
Q 004368 272 QSNDICLYHEKD----DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL--RVLTPRVVGVDTAASHRGNHFFI 345 (758)
Q Consensus 272 ~~~~~~v~~~~~----~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~--~~l~~~~~~~~~~~s~dg~~l~~ 345 (758)
+.-..+...... ..-...+.-++++...+++.. +..+||++|..+.+.+ +.+.....-....|+|+|++++.
T Consensus 111 e~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lk--d~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~v 188 (369)
T PF02239_consen 111 EPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLK--DTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLV 188 (369)
T ss_dssp -EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEET--TTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEE
T ss_pred cceeecccccccccccCCCceeEEecCCCCEEEEEEc--cCCeEEEEEeccccccceeeecccccccccccCcccceeee
Confidence 221111111100 111234556788876665544 4568999998775512 22211111123459999998888
Q ss_pred EEcCCCCCCcEEEEEeCCCCCcceeeecCCCC---ceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCC-CccccccCCc
Q 004368 346 TRRSDELFNSELLACPVDNTSETTVLIPHRES---VKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVG-EPLKSLQGGK 421 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g-~~~~~l~~~~ 421 (758)
..+.. .++..+|.++ .....++..+.. .....+--.+-..+......+...+-.+..+... -....+.--+
T Consensus 189 a~~~s----n~i~viD~~~-~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~ 263 (369)
T PF02239_consen 189 AANGS----NKIAVIDTKT-GKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVK 263 (369)
T ss_dssp EEGGG----TEEEEEETTT-TEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEE
T ss_pred ccccc----ceeEEEeecc-ceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEE
Confidence 76654 3788888765 222223322211 1122232222334444444444333333333211 0001111112
Q ss_pred eeeccCcccccCCCCcccCCcEEEEEE-ecCCCCCEEEEEECCCCc
Q 004368 422 SVEFIDPVYSIDPSESVFSSRILRFHY-SSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 422 ~i~~p~~~~~i~~~~~~~d~~~l~~~~-sS~~~P~~i~~~d~~~~~ 466 (758)
.+...... + ....+++++.+++.. .++. -..+..+|.++.+
T Consensus 264 ~I~~~G~g--l-Fi~thP~s~~vwvd~~~~~~-~~~v~viD~~tl~ 305 (369)
T PF02239_consen 264 TIPTQGGG--L-FIKTHPDSRYVWVDTFLNPD-ADTVQVIDKKTLK 305 (369)
T ss_dssp EEE-SSSS-----EE--TT-SEEEEE-TT-SS-HT-EEEEECCGTE
T ss_pred EEECCCCc--c-eeecCCCCccEEeeccCCCC-CceEEEEECcCcc
Confidence 33332221 1 234478888888763 3333 5689999988765
No 183
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.15 E-value=0.00013 Score=75.54 Aligned_cols=123 Identities=15% Similarity=0.084 Sum_probs=78.1
Q ss_pred EEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchh--HHhc-----ccccCCc
Q 004368 501 ICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ--WYEN-----GKFLKKK 573 (758)
Q Consensus 501 ~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~--~~~~-----~~~~~~~ 573 (758)
.-++.|+.. . ....|++|+..|.............+..|++.|+..++...+-.|..-.. +... .....+.
T Consensus 79 ~~~~~P~~~-~-~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 79 FQLLLPKRW-D-SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred EEEEECCcc-c-cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 344556653 1 24589999888843322221222235578888999999986654432111 1000 0112234
Q ss_pred ChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCC
Q 004368 574 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (758)
Q Consensus 574 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 628 (758)
..+.+..+.+.||.++|+ .++++.|.||||.+|..+++..|.-..++-+.++
T Consensus 157 ~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~ 208 (348)
T PF09752_consen 157 ATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLSW 208 (348)
T ss_pred HHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeecc
Confidence 567778889999999987 5999999999999999999988876555444443
No 184
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.14 E-value=0.00011 Score=76.88 Aligned_cols=124 Identities=12% Similarity=0.158 Sum_probs=87.9
Q ss_pred EEEEEECCCCceeec--cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCC
Q 004368 218 TVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES 295 (758)
Q Consensus 218 ~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~D 295 (758)
.|-|+|.++|+.... .+.+ ...+.-+|||+.+.++.+. .++|.+++.++. ..+.+........++.|+|+
T Consensus 383 ~l~iyd~~~~e~kr~e~~lg~-I~av~vs~dGK~~vvaNdr----~el~vididngn---v~~idkS~~~lItdf~~~~n 454 (668)
T COG4946 383 KLGIYDKDGGEVKRIEKDLGN-IEAVKVSPDGKKVVVANDR----FELWVIDIDNGN---VRLIDKSEYGLITDFDWHPN 454 (668)
T ss_pred eEEEEecCCceEEEeeCCccc-eEEEEEcCCCcEEEEEcCc----eEEEEEEecCCC---eeEecccccceeEEEEEcCC
Confidence 578889988887653 2333 4458889999655555443 479999999883 33444444556678899999
Q ss_pred CcEEEEEecCC-cceEEEEEeCCCCCceEEe-eccccceeeEEeecCCEEEEEEcCC
Q 004368 296 KKFLFIASESK-ITRFVFYLDVSKPEELRVL-TPRVVGVDTAASHRGNHFFITRRSD 350 (758)
Q Consensus 296 g~~l~~~s~~~-~~~~l~~~d~~~~~~~~~l-~~~~~~~~~~~s~dg~~l~~~s~~~ 350 (758)
++||++.-.+. -+..|.+.|.++++ .-.+ ++...+....|+|||+.|||++++.
T Consensus 455 sr~iAYafP~gy~tq~Iklydm~~~K-iy~vTT~ta~DfsPaFD~d~ryLYfLs~Rs 510 (668)
T COG4946 455 SRWIAYAFPEGYYTQSIKLYDMDGGK-IYDVTTPTAYDFSPAFDPDGRYLYFLSARS 510 (668)
T ss_pred ceeEEEecCcceeeeeEEEEecCCCe-EEEecCCcccccCcccCCCCcEEEEEeccc
Confidence 99999876543 34678889998876 4434 3444445566999999999999875
No 185
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.14 E-value=3e-05 Score=75.79 Aligned_cols=198 Identities=20% Similarity=0.181 Sum_probs=110.4
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHc--C-cEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR--G-FIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~--G-~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (758)
.+.-++.+.|-|.+.+. +..|..+ + +.++.+.++|.+.. .+..-++|+.+.++.|..+-
T Consensus 6 ~~~~L~cfP~AGGsa~~-------fr~W~~~lp~~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el 67 (244)
T COG3208 6 ARLRLFCFPHAGGSASL-------FRSWSRRLPADIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANEL 67 (244)
T ss_pred CCceEEEecCCCCCHHH-------HHHHHhhCCchhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHh
Confidence 34456777776544332 2333331 3 77899999987753 11233467777777776653
Q ss_pred C--CCCCcEEEEEeChhHHHHHHHHhhC------CCceeEEEEcCCccchhhccCCCCCCCChhh----hhcc-CCC---
Q 004368 591 Y--CTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE----WEEW-GDP--- 654 (758)
Q Consensus 591 ~--~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~----~~e~-g~p--- 654 (758)
. .-....+++||||||.++.-++.+. |..|-..-+.+|..+--... ......+ ..++ |.|
T Consensus 68 ~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i----~~~~D~~~l~~l~~lgG~p~e~ 143 (244)
T COG3208 68 LPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQI----HHLDDADFLADLVDLGGTPPEL 143 (244)
T ss_pred ccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCc----cCCCHHHHHHHHHHhCCCChHH
Confidence 3 2335899999999999998777642 33333334445533211111 1111111 1223 444
Q ss_pred -CCHHHH-----------HHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCC
Q 004368 655 -WKEEFY-----------FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAG 722 (758)
Q Consensus 655 -~~~~~~-----------~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~g 722 (758)
+|+|.. ..+..|.-... ..+.+| +.++.|++|..|...+...|.+.. +...++.++ ++|
T Consensus 144 led~El~~l~LPilRAD~~~~e~Y~~~~~-~pl~~p-i~~~~G~~D~~vs~~~~~~W~~~t---~~~f~l~~f----dGg 214 (244)
T COG3208 144 LEDPELMALFLPILRADFRALESYRYPPP-APLACP-IHAFGGEKDHEVSRDELGAWREHT---KGDFTLRVF----DGG 214 (244)
T ss_pred hcCHHHHHHHHHHHHHHHHHhcccccCCC-CCcCcc-eEEeccCcchhccHHHHHHHHHhh---cCCceEEEe----cCc
Confidence 355432 22222322211 345888 999999999999865555454432 346777777 589
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhcC
Q 004368 723 HFSKSGRFERLREAAFTYTFLMRALS 748 (758)
Q Consensus 723 H~~~~~~~~~~~~~~~~~~fl~~~l~ 748 (758)
|++..... ...++++.+.++
T Consensus 215 HFfl~~~~------~~v~~~i~~~l~ 234 (244)
T COG3208 215 HFFLNQQR------EEVLARLEQHLA 234 (244)
T ss_pred ceehhhhH------HHHHHHHHHHhh
Confidence 98753322 224567766664
No 186
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.13 E-value=0.00027 Score=77.98 Aligned_cols=197 Identities=16% Similarity=0.152 Sum_probs=125.5
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc---cCcceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~---~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
+.++..++.||||++||= |.+...|.|||..+|-=.. ++ ......+.|+.+| .++-.+.|.. |..
T Consensus 350 ~~~i~~l~YSpDgq~iaT-----G~eDgKVKvWn~~SgfC~v-TFteHts~Vt~v~f~~~g~~llssSLDGt-----VRA 418 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIAT-----GAEDGKVKVWNTQSGFCFV-TFTEHTSGVTAVQFTARGNVLLSSSLDGT-----VRA 418 (893)
T ss_pred ccceeeEEECCCCcEEEe-----ccCCCcEEEEeccCceEEE-EeccCCCceEEEEEEecCCEEEEeecCCe-----EEe
Confidence 568899999999999994 5556679999998875433 22 2235679999999 5555555654 555
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFF 344 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 344 (758)
+++... ..-..|+.+.+..+..++..|.|.-+. ....+.-+|+++++++|+.+..|..++..+.. .++|+|..|+
T Consensus 419 wDlkRY--rNfRTft~P~p~QfscvavD~sGelV~--AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~La 494 (893)
T KOG0291|consen 419 WDLKRY--RNFRTFTSPEPIQFSCVAVDPSGELVC--AGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLA 494 (893)
T ss_pred eeeccc--ceeeeecCCCceeeeEEEEcCCCCEEE--eeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEE
Confidence 555443 334456666666666777778887543 45667789999999999733344444444433 4899999887
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
-.+.+. ..+++-+=-.. +..+ -++...++.--.|.++++.+.+...+ | +|.+|+...
T Consensus 495 S~SWDk---TVRiW~if~s~-~~vE-tl~i~sdvl~vsfrPdG~elaVaTld-g--qItf~d~~~ 551 (893)
T KOG0291|consen 495 SGSWDK---TVRIWDIFSSS-GTVE-TLEIRSDVLAVSFRPDGKELAVATLD-G--QITFFDIKE 551 (893)
T ss_pred eccccc---eEEEEEeeccC-ceee-eEeeccceeEEEEcCCCCeEEEEEec-c--eEEEEEhhh
Confidence 776654 34555432111 1222 22333344445677788888776653 3 366676653
No 187
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.12 E-value=0.00013 Score=72.65 Aligned_cols=46 Identities=26% Similarity=0.338 Sum_probs=40.1
Q ss_pred HHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCcc
Q 004368 585 YLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (758)
Q Consensus 585 ~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~ 630 (758)
|+.++.-+|+++.+|+|+|+||++++.++..+|+.|.+.++.+|-+
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 3334466899999999999999999999999999999999999853
No 188
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.10 E-value=0.0081 Score=63.72 Aligned_cols=116 Identities=16% Similarity=0.054 Sum_probs=71.3
Q ss_pred CCCEEEEEEeCCC-CeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeC------CCCCCceEEEEEcCCCC
Q 004368 201 DNKLVAYAEDTKG-DEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMD------EILRPDKAWLHKLEADQ 272 (758)
Q Consensus 201 DG~~lAy~~~~~G-~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~------~~~~~~~v~~~~l~~~~ 272 (758)
|+++ +|..+..- +-..+|+|+|.++++.+.. .....-.. ..||||+.+|++.. .+.+...|-.+++.+..
T Consensus 11 ~~~~-v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~-~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARR-VYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNP-VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCE-EEEECCcccccCceEEEEECCCCEEEEEEEccCCCce-eECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 5555 67776541 1115899999999988763 22222233 49999965566543 23344567788888774
Q ss_pred CCcEEEeeecCCc-----eeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 273 SNDICLYHEKDDI-----YSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 273 ~~~~~v~~~~~~~-----~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
....+... .++. .-..+.+|||||+|++. +......|-++|+++++
T Consensus 89 ~~~~i~~p-~~p~~~~~~~~~~~~ls~dgk~l~V~-n~~p~~~V~VvD~~~~k 139 (352)
T TIGR02658 89 PIADIELP-EGPRFLVGTYPWMTSLTPDNKTLLFY-QFSPSPAVGVVDLEGKA 139 (352)
T ss_pred EEeEEccC-CCchhhccCccceEEECCCCCEEEEe-cCCCCCEEEEEECCCCc
Confidence 43333332 2222 11246789999998874 33345678899998876
No 189
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.09 E-value=0.01 Score=60.97 Aligned_cols=245 Identities=11% Similarity=0.074 Sum_probs=116.7
Q ss_pred EEEEEEECC--CCceeec-cc--cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeee---cCCceee
Q 004368 217 YTVYVIDIE--TGTPVGK-PL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE---KDDIYSL 288 (758)
Q Consensus 217 ~~l~v~dl~--~g~~~~~-~~--~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~---~~~~~~~ 288 (758)
..|++++++ +|+.... .+ .+..+.++|+|+++.+|+....+. ...+-.+.++....+-..+-.. ..+. +
T Consensus 16 ~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~-~ggvaay~iD~~~G~Lt~ln~~~~~g~~p--~ 92 (346)
T COG2706 16 QGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGE-EGGVAAYRIDPDDGRLTFLNRQTLPGSPP--C 92 (346)
T ss_pred CceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCC-cCcEEEEEEcCCCCeEEEeeccccCCCCC--e
Confidence 346666665 4444322 11 222455899999965566543322 2224444444321122222111 1222 4
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCC--ceEEeeccccc----------eeeE-EeecCCEEEEEEcCCCCCCc
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVG----------VDTA-ASHRGNHFFITRRSDELFNS 355 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~--~~~~l~~~~~~----------~~~~-~s~dg~~l~~~s~~~~~~~~ 355 (758)
.++.++||++++...-..+.-.++-+..+ |. ....+...... ..+. ++|+|++|+ +.+.+ ..
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~-v~DLG-~D-- 167 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLV-VPDLG-TD-- 167 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCCCCCEEE-EeecC-Cc--
Confidence 57789999998876655554444444333 33 12111111111 2333 899998654 44444 33
Q ss_pred EEEEEeCCCCCc--cee-eecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccC----c
Q 004368 356 ELLACPVDNTSE--TTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFID----P 428 (758)
Q Consensus 356 ~L~~~~~~~~~~--~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~----~ 428 (758)
+++..+++.+.. ... .++++...+--.|.+.++..|++..-++ .+.++..+..++.+..++.- -.+|+ .
T Consensus 168 ri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~s--tV~v~~y~~~~g~~~~lQ~i--~tlP~dF~g~ 243 (346)
T COG2706 168 RIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNS--TVDVLEYNPAVGKFEELQTI--DTLPEDFTGT 243 (346)
T ss_pred eEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCC--EEEEEEEcCCCceEEEeeee--ccCccccCCC
Confidence 455555543211 111 3344333333345566666665554444 46666666543433333211 11232 1
Q ss_pred ccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEEEEEeee
Q 004368 429 VYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETV 475 (758)
Q Consensus 429 ~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~~~~~~~ 475 (758)
.+ ......+.|++.++. ..-.-.--.+|.+|..+++.++....+.
T Consensus 244 ~~-~aaIhis~dGrFLYa-sNRg~dsI~~f~V~~~~g~L~~~~~~~t 288 (346)
T COG2706 244 NW-AAAIHISPDGRFLYA-SNRGHDSIAVFSVDPDGGKLELVGITPT 288 (346)
T ss_pred Cc-eeEEEECCCCCEEEE-ecCCCCeEEEEEEcCCCCEEEEEEEecc
Confidence 11 122334566754433 2222234567788888888766655543
No 190
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=98.09 E-value=0.00023 Score=68.63 Aligned_cols=199 Identities=14% Similarity=0.132 Sum_probs=107.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccC---cceeEEEecCCeEEEEEeCCC----------
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNEALVYITMDEI---------- 257 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~---~~~~~~wspDg~l~y~~~~~~---------- 257 (758)
.+....++||++.||-. | +..|+++|+.++.+.+. ++++ .+..+.|--||+..|++.+++
T Consensus 42 qVNrLeiTpdk~~LAaa----~--~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~ 115 (311)
T KOG0315|consen 42 QVNRLEITPDKKDLAAA----G--NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL 115 (311)
T ss_pred ceeeEEEcCCcchhhhc----c--CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc
Confidence 46778999999999843 3 47899999999887554 4433 256688888997778765442
Q ss_pred ---------------------------CCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceE
Q 004368 258 ---------------------------LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRF 310 (758)
Q Consensus 258 ---------------------------~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~ 310 (758)
+....|+.++++...-.. .+..|.+ .+.-++...|||++|+. .+++++-
T Consensus 116 ~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~-~liPe~~-~~i~sl~v~~dgsml~a-~nnkG~c- 191 (311)
T KOG0315|consen 116 SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTH-ELIPEDD-TSIQSLTVMPDGSMLAA-ANNKGNC- 191 (311)
T ss_pred ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccc-ccCCCCC-cceeeEEEcCCCcEEEE-ecCCccE-
Confidence 011234445554432111 1222222 23346778999999764 4555544
Q ss_pred EEEEeCCCCC---ceEEeecccc--c--eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCc-eeee
Q 004368 311 VFYLDVSKPE---ELRVLTPRVV--G--VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESV-KLQD 382 (758)
Q Consensus 311 l~~~d~~~~~---~~~~l~~~~~--~--~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~-~~~~ 382 (758)
|+.++-+.. .+.++.+-.. + ....+|||+++|+-.+.+. ..+|+.. ++--..+..+.....- =-..
T Consensus 192 -yvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdk---tv~iwn~--~~~~kle~~l~gh~rWvWdc~ 265 (311)
T KOG0315|consen 192 -YVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDK---TVKIWNT--DDFFKLELVLTGHQRWVWDCA 265 (311)
T ss_pred -EEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCc---eEEEEec--CCceeeEEEeecCCceEEeee
Confidence 444543332 3444444221 1 2335899999887665543 3444443 3310111122211110 0123
Q ss_pred EEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 383 IQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 383 ~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
|+.++.+|+ +...++. .++|++..
T Consensus 266 FS~dg~Ylv-Tassd~~--~rlW~~~~ 289 (311)
T KOG0315|consen 266 FSADGEYLV-TASSDHT--ARLWDLSA 289 (311)
T ss_pred eccCccEEE-ecCCCCc--eeeccccc
Confidence 444555554 4444444 55677764
No 191
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.08 E-value=0.00052 Score=73.32 Aligned_cols=235 Identities=13% Similarity=0.097 Sum_probs=136.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceee---ccccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG---KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~---~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
-.-++||.|+|++|-..- ..|.|++..+=..+. +.++|+ ..+.|||-+ -|+|-+....+.|.++-+..+
T Consensus 308 WP~frWS~DdKy~Arm~~------~sisIyEtpsf~lld~Kslki~gI-r~FswsP~~~llAYwtpe~~~~parvtL~ev 380 (698)
T KOG2314|consen 308 WPIFRWSHDDKYFARMTG------NSISIYETPSFMLLDKKSLKISGI-RDFSWSPTSNLLAYWTPETNNIPARVTLMEV 380 (698)
T ss_pred cceEEeccCCceeEEecc------ceEEEEecCceeeecccccCCccc-cCcccCCCcceEEEEcccccCCcceEEEEec
Confidence 345789999999996653 346777654422222 134444 458999999 788887766677888888888
Q ss_pred CCCCCC-cEEEeeecCCceeeEEEEcCCCcEEEEEecCCcc---------eEEEEEeCCCCCceEEeeccccceeeEEee
Q 004368 269 EADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESKIT---------RFVFYLDVSKPEELRVLTPRVVGVDTAASH 338 (758)
Q Consensus 269 ~~~~~~-~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~---------~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~ 338 (758)
.+...- ...++.-.| +.+.|-..|+||.+...+... -+|+.++-.+- ++..+--...-+...|.|
T Consensus 381 Ps~~~iRt~nlfnVsD----ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdI-pve~velke~vi~FaWEP 455 (698)
T KOG2314|consen 381 PSKREIRTKNLFNVSD----CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDI-PVEVVELKESVIAFAWEP 455 (698)
T ss_pred Cccceeeeccceeeec----cEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCC-Cceeeecchheeeeeecc
Confidence 766321 111333222 245699999999998765321 35666654332 222221122224456999
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCCCCccee-eecCCCCc--eeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccc
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESV--KLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLK 415 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~ 415 (758)
.|+++.+++......+.+.|.+.... ..+ ++..-+.. .-..+++.|..+++.........+..|+.+...
T Consensus 456 ~gdkF~vi~g~~~k~tvsfY~~e~~~---~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~---- 528 (698)
T KOG2314|consen 456 HGDKFAVISGNTVKNTVSFYAVETNI---KKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYAD---- 528 (698)
T ss_pred CCCeEEEEEccccccceeEEEeecCC---CchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhh----
Confidence 99999988766534556677665322 222 22221111 223456667788877766555567788776311
Q ss_pred cccCCceeeccCcccccCCCCcccCCcEEEEEEecC
Q 004368 416 SLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL 451 (758)
Q Consensus 416 ~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~ 451 (758)
.+.+..|++. ......+++.|..+.-..+++
T Consensus 529 ----~k~~~~~eh~-~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 529 ----LKDTASPEHF-AATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred ----hhhccCcccc-ccccceECCCCCEEEEeeehh
Confidence 1223333321 234466778777665544444
No 192
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=98.07 E-value=0.003 Score=70.14 Aligned_cols=241 Identities=12% Similarity=0.093 Sum_probs=137.6
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc--cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
..+..+.|+--|.+|||....-| +|-||+..+...+-... -.....++.||||+++.+..+++ +|.+++.
T Consensus 308 ~~I~t~~~N~tGDWiA~g~~klg----QLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDg----KVKvWn~ 379 (893)
T KOG0291|consen 308 QKILTVSFNSTGDWIAFGCSKLG----QLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDG----KVKVWNT 379 (893)
T ss_pred ceeeEEEecccCCEEEEcCCccc----eEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCC----cEEEEec
Confidence 35667788888999999887655 68888876655432111 11245689999997666665443 4777777
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-e-eeEEeecCCEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-V-DTAASHRGNHFFIT 346 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~-~~~~s~dg~~l~~~ 346 (758)
.++ -=...|++..... ..+.|+.+|+.|+-++-+ ++ |..+|+......+.++....- . ...++|.|. |+++
T Consensus 380 ~Sg--fC~vTFteHts~V-t~v~f~~~g~~llssSLD-Gt--VRAwDlkRYrNfRTft~P~p~QfscvavD~sGe-lV~A 452 (893)
T KOG0291|consen 380 QSG--FCFVTFTEHTSGV-TAVQFTARGNVLLSSSLD-GT--VRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGE-LVCA 452 (893)
T ss_pred cCc--eEEEEeccCCCce-EEEEEEecCCEEEEeecC-Ce--EEeeeecccceeeeecCCCceeeeEEEEcCCCC-EEEe
Confidence 655 2244566655443 367899999887654443 33 344466543324444432221 1 123666676 5555
Q ss_pred EcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeecc
Q 004368 347 RRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFI 426 (758)
Q Consensus 347 s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p 426 (758)
...+ .+.|+++++.++.....+-.+...+.-..|++.++.|+-...+. .+++|++=...+.+ .++..+
T Consensus 453 G~~d---~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDk---TVRiW~if~s~~~v------Etl~i~ 520 (893)
T KOG0291|consen 453 GAQD---SFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDK---TVRIWDIFSSSGTV------ETLEIR 520 (893)
T ss_pred eccc---eEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccc---eEEEEEeeccCcee------eeEeec
Confidence 4443 59999999987322222444443333335777777665443333 36667664221111 233332
Q ss_pred CcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCC
Q 004368 427 DPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMG 465 (758)
Q Consensus 427 ~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~ 465 (758)
. .+.++++.|++.++.+...+ .+|-.+|...+
T Consensus 521 s---dvl~vsfrPdG~elaVaTld----gqItf~d~~~~ 552 (893)
T KOG0291|consen 521 S---DVLAVSFRPDGKELAVATLD----GQITFFDIKEA 552 (893)
T ss_pred c---ceeEEEEcCCCCeEEEEEec----ceEEEEEhhhc
Confidence 2 23456778899998664432 35555665443
No 193
>PTZ00420 coronin; Provisional
Probab=98.07 E-value=0.015 Score=65.86 Aligned_cols=199 Identities=9% Similarity=0.070 Sum_probs=107.4
Q ss_pred EECCCCCEEEEEEeCC-CCeEEEEEEEECCCCceeecccc---CcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004368 197 QVSPDNKLVAYAEDTK-GDEIYTVYVIDIETGTPVGKPLV---GVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 197 ~~SPDG~~lAy~~~~~-G~e~~~l~v~dl~~g~~~~~~~~---~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
.++..++++|+..+.. |+....|.++++.....+. .+. +.+..++|+|+. .++++...+. .|.++++.++
T Consensus 33 ~ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~-~L~gH~~~V~~lafsP~~~~lLASgS~Dg----tIrIWDi~t~ 107 (568)
T PTZ00420 33 GIACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVI-KLKGHTSSILDLQFNPCFSEILASGSEDL----TIRVWEIPHN 107 (568)
T ss_pred eEeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEE-EEcCCCCCEEEEEEcCCCCCEEEEEeCCC----eEEEEECCCC
Confidence 3566788888887653 4445678888876554333 222 235668999984 6666654332 4677777643
Q ss_pred CC------CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEE
Q 004368 272 QS------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 344 (758)
Q Consensus 272 ~~------~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~ 344 (758)
.. +....+... ......+.|+|++..+++++... ..|.++|+.++.....+. ....+. ..|+++|..|+
T Consensus 108 ~~~~~~i~~p~~~L~gH-~~~V~sVaf~P~g~~iLaSgS~D--gtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLa 183 (568)
T PTZ00420 108 DESVKEIKDPQCILKGH-KKKISIIDWNPMNYYIMCSSGFD--SFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLS 183 (568)
T ss_pred CccccccccceEEeecC-CCcEEEEEECCCCCeEEEEEeCC--CeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEE
Confidence 21 111223222 22334688999999887655443 346677887765222222 222232 34899999765
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeE-----EEeCCEEEEEEEeC-CeeEEEEEEcCC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDI-----QLFIDHLAVYEREG-GLQKITTYRLPA 409 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~l~~~~~~~-g~~~l~v~~l~~ 409 (758)
..+ .+ ..|..+|+.+......+..+........+ +.+++.++.....+ ...++.+|++..
T Consensus 184 t~s-~D----~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 184 GTC-VG----KHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred EEe-cC----CEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 443 33 35777787653222223333322111112 12334554444332 224689999874
No 194
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.06 E-value=0.00013 Score=71.25 Aligned_cols=101 Identities=11% Similarity=0.085 Sum_probs=64.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
+..++|||+|+.+|...... ...|.++|+++....... ......+.|||+| .++...... ....|.++++.+.
T Consensus 62 I~~~~WsP~g~~favi~g~~---~~~v~lyd~~~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n--~~G~l~~wd~~~~ 135 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGSM---PAKVTLYDVKGKKIFSFG-TQPRNTISWSPDGRFLVLAGFGN--LNGDLEFWDVRKK 135 (194)
T ss_pred eEEEEECcCCCEEEEEEccC---CcccEEEcCcccEeEeec-CCCceEEEECCCCCEEEEEEccC--CCcEEEEEECCCC
Confidence 78899999999998776322 237889999743333221 2234568999999 555544432 2235777787633
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEec
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASE 304 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~ 304 (758)
..+...... ....+.|||||++++..+.
T Consensus 136 ----~~i~~~~~~-~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 136 ----KKISTFEHS-DATDVEWSPDGRYLATATT 163 (194)
T ss_pred ----EEeeccccC-cEEEEEEcCCCCEEEEEEe
Confidence 223322222 2457889999999987554
No 195
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.05 E-value=0.0012 Score=67.70 Aligned_cols=193 Identities=17% Similarity=0.160 Sum_probs=112.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cc-cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
+..+.|+|++++|+.... ...|+++|+.+++.... .. ......+.|++++.++++...+ ..+..+++.+
T Consensus 54 i~~~~~~~~~~~l~~~~~-----~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~~i~~~~~~~ 124 (289)
T cd00200 54 VRDVAASADGTYLASGSS-----DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRD----KTIKVWDVET 124 (289)
T ss_pred eeEEEECCCCCEEEEEcC-----CCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCC----CeEEEEECCC
Confidence 467899999988877654 24799999988654432 21 2235668999998666665422 2477888875
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~ 349 (758)
. +....+.. .......+.++|++++|+... ....|+++|+.+++....+......+. ..|+++++.+++.+.
T Consensus 125 ~--~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~---~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 197 (289)
T cd00200 125 G--KCLTTLRG-HTDWVNSVAFSPDGTFVASSS---QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSS- 197 (289)
T ss_pred c--EEEEEecc-CCCcEEEEEEcCcCCEEEEEc---CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecC-
Confidence 4 22333332 222334678999988776644 224578888876542333332222222 348899988877765
Q ss_pred CCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCC
Q 004368 350 DELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~ 409 (758)
+ ..|..+++........+..+. ..+..+.+..+ .+++....++ .+.+|++..
T Consensus 198 ~----~~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~--~i~i~~~~~ 250 (289)
T cd00200 198 D----GTIKLWDLSTGKCLGTLRGHE--NGVNSVAFSPDGYLLASGSEDG--TIRVWDLRT 250 (289)
T ss_pred C----CcEEEEECCCCceecchhhcC--CceEEEEEcCCCcEEEEEcCCC--cEEEEEcCC
Confidence 2 357777775421111121222 24556666664 4444444355 377888763
No 196
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.01 E-value=0.011 Score=63.24 Aligned_cols=188 Identities=9% Similarity=0.062 Sum_probs=93.7
Q ss_pred EEEEEeCCCCeEEEEEEEECCC-Cceeec-cc--cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEee
Q 004368 205 VAYAEDTKGDEIYTVYVIDIET-GTPVGK-PL--VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (758)
Q Consensus 205 lAy~~~~~G~e~~~l~v~dl~~-g~~~~~-~~--~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~ 280 (758)
.+|+....+ ..|.++|+.+ |+.... .+ .+....++++||++++|+.... ...+..+++.... .-..+-.
T Consensus 3 ~~y~~~~~~---~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~---~~~i~~~~~~~~g-~l~~~~~ 75 (330)
T PRK11028 3 IVYIASPES---QQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRP---EFRVLSYRIADDG-ALTFAAE 75 (330)
T ss_pred EEEEEcCCC---CCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECC---CCcEEEEEECCCC-ceEEeee
Confidence 456665433 4578888864 443321 22 2334558999999666665432 2346555664221 1111111
Q ss_pred ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCC-CC--ceEEeeccccc-eeeEEeecCCEEEEEEcCCCCCCcE
Q 004368 281 EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK-PE--ELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSE 356 (758)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~-~~--~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~~ 356 (758)
.........+.++|||++|+..... ...|.++++++ +. ..........+ ....++|+|+++|+....+ ..
T Consensus 76 ~~~~~~p~~i~~~~~g~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~----~~ 149 (330)
T PRK11028 76 SPLPGSPTHISTDHQGRFLFSASYN--ANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKE----DR 149 (330)
T ss_pred ecCCCCceEEEECCCCCEEEEEEcC--CCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCC----CE
Confidence 1111122357899999998876543 34556666643 21 11111111111 2234899998877654432 45
Q ss_pred EEEEeCCCCCcce------eeecCCCCceeeeEE--EeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 357 LLACPVDNTSETT------VLIPHRESVKLQDIQ--LFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 357 L~~~~~~~~~~~~------~l~~~~~~~~~~~~~--~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
|..+++++.+... .-++... ....+. ++++++++.. .+...+.+|+++.
T Consensus 150 v~v~d~~~~g~l~~~~~~~~~~~~g~--~p~~~~~~pdg~~lyv~~--~~~~~v~v~~~~~ 206 (330)
T PRK11028 150 IRLFTLSDDGHLVAQEPAEVTTVEGA--GPRHMVFHPNQQYAYCVN--ELNSSVDVWQLKD 206 (330)
T ss_pred EEEEEECCCCcccccCCCceecCCCC--CCceEEECCCCCEEEEEe--cCCCEEEEEEEeC
Confidence 7777765422110 0111221 123344 4444555443 3345688888874
No 197
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=98.01 E-value=0.00076 Score=68.94 Aligned_cols=120 Identities=20% Similarity=0.163 Sum_probs=67.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
+-..++||||++|| .|+...++++||+.|..+.. +..+ -.-.++||||| .|+--+.+. .+.+++-
T Consensus 118 Vl~~~fsp~g~~l~-----tGsGD~TvR~WD~~TeTp~~-t~KgH~~WVlcvawsPDgk~iASG~~dg-----~I~lwdp 186 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLV-----TGSGDTTVRLWDLDTETPLF-TCKGHKNWVLCVAWSPDGKKIASGSKDG-----SIRLWDP 186 (480)
T ss_pred EEEEEecCCCceEE-----ecCCCceEEeeccCCCCcce-eecCCccEEEEEEECCCcchhhccccCC-----eEEEecC
Confidence 33569999999998 45557999999999877654 3333 25668999999 565433332 4667776
Q ss_pred CCCCCCcEEEeeecCCceeeEEEE-----cCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecc
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQA-----SESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR 328 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~-----S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~ 328 (758)
.+++..-. .+.. ...+...++| .|..++|+ +++..++ +.++|+..+.....+...
T Consensus 187 ktg~~~g~-~l~g-H~K~It~Lawep~hl~p~~r~la-s~skDg~--vrIWd~~~~~~~~~lsgH 246 (480)
T KOG0271|consen 187 KTGQQIGR-ALRG-HKKWITALAWEPLHLVPPCRRLA-SSSKDGS--VRIWDTKLGTCVRTLSGH 246 (480)
T ss_pred CCCCcccc-cccC-cccceeEEeecccccCCCcccee-cccCCCC--EEEEEccCceEEEEeccC
Confidence 55543111 2222 2334445555 45666543 2333333 344455443323333333
No 198
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.00 E-value=0.0004 Score=74.66 Aligned_cols=103 Identities=20% Similarity=0.236 Sum_probs=66.5
Q ss_pred CCCCEEEE----ecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHc
Q 004368 514 GSDPLLLY----GYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 589 (758)
Q Consensus 514 ~~~P~vl~----~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 589 (758)
.+.|.||. +|| +|...... ...+-..+..|.-|..+-+.-..+-| +++.|+..+....+++
T Consensus 67 ~krP~vViDPRAGHG-pGIGGFK~-dSevG~AL~~GHPvYFV~F~p~P~pg-------------QTl~DV~~ae~~Fv~~ 131 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIGGFKP-DSEVGVALRAGHPVYFVGFFPEPEPG-------------QTLEDVMRAEAAFVEE 131 (581)
T ss_pred CCCCeEEeCCCCCCC-CCccCCCc-ccHHHHHHHcCCCeEEEEecCCCCCC-------------CcHHHHHHHHHHHHHH
Confidence 45787777 576 45544332 23444455568888777765433333 4678877764432221
Q ss_pred ---CCCCCCcEEEEEeChhHHHHHHHHhhCCCcee-EEEEcCCccc
Q 004368 590 ---CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFK-AAVAAVPFVD 631 (758)
Q Consensus 590 ---~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~-a~v~~~~~~d 631 (758)
-.-+..|..++|-+.||.+++.+++.+|+++. .+++.+|+.-
T Consensus 132 V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsy 177 (581)
T PF11339_consen 132 VAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSY 177 (581)
T ss_pred HHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccc
Confidence 12233499999999999999999999999987 4455666543
No 199
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.98 E-value=0.00015 Score=82.73 Aligned_cols=116 Identities=12% Similarity=0.107 Sum_probs=77.0
Q ss_pred EeeEEECCCCCEEEEEEeCC-------CCeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCCCCCCceEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTK-------GDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~-------G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~ 264 (758)
+..|+|||||++|+|..+.+ .+...+|+++++++|+... .+++....+.||||| +++|+.. .+|+
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-~~~g~Issl~wSpDG~RiA~i~~------g~v~ 471 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-RVPGPISELQLSRDGVRAAMIIG------GKVY 471 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-ccCCCcCeEEECCCCCEEEEEEC------CEEE
Confidence 67899999999999887531 1224689999999888765 555557779999999 8999872 2577
Q ss_pred E---EEcCCCCCCcEEE-----eeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 265 L---HKLEADQSNDICL-----YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 265 ~---~~l~~~~~~~~~v-----~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
. .+.+.+ + ..+ +......-..++.|..|++ |++... .....+|.+++++..
T Consensus 472 Va~Vvr~~~G--~-~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~-~~~~~v~~v~vDG~~ 530 (591)
T PRK13616 472 LAVVEQTEDG--Q-YALTNPREVGPGLGDTAVSLDWRTGDS-LVVGRS-DPEHPVWYVNLDGSN 530 (591)
T ss_pred EEEEEeCCCC--c-eeecccEEeecccCCccccceEecCCE-EEEEec-CCCCceEEEecCCcc
Confidence 6 333333 2 222 1111111124578999998 444433 345679999998754
No 200
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.93 E-value=1.6e-05 Score=79.09 Aligned_cols=167 Identities=19% Similarity=0.197 Sum_probs=76.6
Q ss_pred CCCEEEEecCCCccCCCCCCChHH---HHHHHc-CcEEEEEecCCCC--------------------CCchhHHhccccc
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSR---LSLLDR-GFIFAIAQIRGGG--------------------ELGRQWYENGKFL 570 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~---~~l~~~-G~~v~~~~~RG~g--------------------~~G~~~~~~~~~~ 570 (758)
+.+-||.+||...+. .-|.... ...+.. ++-++.+|-+--- +-...|......
T Consensus 3 ~k~riLcLHG~~~na--~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~- 79 (212)
T PF03959_consen 3 RKPRILCLHGYGQNA--EIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDD- 79 (212)
T ss_dssp ---EEEEE--TT--H--HHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S--
T ss_pred CCceEEEeCCCCcCH--HHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCC-
Confidence 457899999943322 2232222 233344 8888888754211 111233332211
Q ss_pred CCcChHhHHHHHHHHH----HHcCCCCCCcEEEEEeChhHHHHHHHHhhC--------CCceeEEEEcCCccchhhccCC
Q 004368 571 KKKNTFTDFIACAEYL----IKNCYCTKEKLCIEGRSAGGLLIGAVLNMR--------PDLFKAAVAAVPFVDVLTTMLD 638 (758)
Q Consensus 571 ~~~~~~~D~~~~~~~l----~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--------p~~f~a~v~~~~~~d~~~~~~~ 638 (758)
.....++..++++| .++|- -.||+|+|.||.+++.++.+. ...|+.+|+.+++.-....
T Consensus 80 --~~~~~~~~~sl~~l~~~i~~~GP----fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--- 150 (212)
T PF03959_consen 80 --DHEYEGLDESLDYLRDYIEENGP----FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--- 150 (212)
T ss_dssp --SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----
T ss_pred --cccccCHHHHHHHHHHHHHhcCC----eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---
Confidence 22345555555554 33342 479999999999988777531 2257888888886421100
Q ss_pred CCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEec
Q 004368 639 PTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCE 718 (758)
Q Consensus 639 ~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 718 (758)
+.....-.++++| +|-++|.+|+.+++..++++++..... .+. +..
T Consensus 151 ---------------------------~~~~~~~~~i~iP-tlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v-~~h-- 196 (212)
T PF03959_consen 151 ---------------------------YQELYDEPKISIP-TLHVIGENDPVVPPERSEALAEMFDPD---ARV-IEH-- 196 (212)
T ss_dssp ---------------------------GTTTT--TT---E-EEEEEETT-SSS-HHHHHHHHHHHHHH---EEE-EEE--
T ss_pred ---------------------------hhhhhccccCCCC-eEEEEeCCCCCcchHHHHHHHHhccCC---cEE-EEE--
Confidence 0000012234677 888899999999999999999888764 222 222
Q ss_pred CCCCCCCCCC
Q 004368 719 LGAGHFSKSG 728 (758)
Q Consensus 719 ~~~gH~~~~~ 728 (758)
+.||.....
T Consensus 197 -~gGH~vP~~ 205 (212)
T PF03959_consen 197 -DGGHHVPRK 205 (212)
T ss_dssp -SSSSS----
T ss_pred -CCCCcCcCC
Confidence 789987543
No 201
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.93 E-value=8.1e-05 Score=77.99 Aligned_cols=237 Identities=16% Similarity=0.130 Sum_probs=122.4
Q ss_pred eEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChH
Q 004368 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 576 (758)
Q Consensus 497 ~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~ 576 (758)
..+.+.+..|++. ...++.|++++.||....... .......++..++.++..+....++.+...+... ......
T Consensus 31 ~~~~~~l~~p~~~-~~~~~~p~v~~~h~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~~~ 104 (299)
T COG1073 31 IALAAVLHLPPSG-NEEKKLPAVVFLHGFGSSKEQ--SLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLA---DSEGYA 104 (299)
T ss_pred ceeeeEEEecCCC-CccccCceEEeccCccccccC--cchHHHHhhhceeEEeeecccccccccccccccc---Cccccc
Confidence 4577778888875 444689999999995433322 2225677888888877776521111111100000 000000
Q ss_pred hHHHHHHHHHHH---------cCCCCCCcEEEEEeChhHHHHHHHHhhCCC---ceeEEEEcCCc-----cchhhc----
Q 004368 577 TDFIACAEYLIK---------NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD---LFKAAVAAVPF-----VDVLTT---- 635 (758)
Q Consensus 577 ~D~~~~~~~l~~---------~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~~~-----~d~~~~---- 635 (758)
.++......... ......++....|.+.||..+...+...+. ..+.++...++ +.....
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~ 184 (299)
T COG1073 105 EDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPEL 184 (299)
T ss_pred cccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHH
Confidence 111111111100 011223678888888888887777776652 22222222111 110000
Q ss_pred cCC------CCCCCChh--hhhccCCCCCHHHHHHHHhcCcccccCCCC-CCeEEEeccCCCCCCCChHHHHHHHHHHhc
Q 004368 636 MLD------PTIPLTTA--EWEEWGDPWKEEFYFYMKSYSPVDNVKAQN-YPHILVTAGLNDPRVMYSEPAKFVAKLREM 706 (758)
Q Consensus 636 ~~~------~~~~~~~~--~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~-~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~ 706 (758)
... ........ ....+..+... ...+...++...+.++. .| +|++||..|..||..++.+++.+.+..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~i~~~P-~l~~~G~~D~~vp~~~~~~~~~~~~~~ 261 (299)
T COG1073 185 ARELIDYLITPGGFAPLPAPEAPLDTLPLR--AVLLLLLDPFDDAEKISPRP-VLLVHGERDEVVPLRDAEDLYEAARER 261 (299)
T ss_pred HHhhhhhhccCCCCCCCCcccccccccccc--hhhhccCcchhhHhhcCCcc-eEEEecCCCcccchhhhHHHHhhhccC
Confidence 000 00000000 00000111111 12345667777777775 57 999999999999999999999998875
Q ss_pred CCCCceEEEEecCCCCCCCCC-ChHHHHHHHHHHHHHHHHhc
Q 004368 707 KTDDNILLFKCELGAGHFSKS-GRFERLREAAFTYTFLMRAL 747 (758)
Q Consensus 707 ~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l 747 (758)
+.+.++++ +.+|.... ......+...++..||.+++
T Consensus 262 --~~~~~~~~---~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 262 --PKKLLFVP---GGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred --CceEEEec---CCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 44455665 77787653 22322233445678888765
No 202
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.91 E-value=5.4e-05 Score=87.47 Aligned_cols=99 Identities=13% Similarity=0.048 Sum_probs=67.5
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchh--HH-----hcc---c---------ccCCcCh
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQ--WY-----ENG---K---------FLKKKNT 575 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~--~~-----~~~---~---------~~~~~~~ 575 (758)
..|+||++||-.+.. ..|...+..|+++||.|+.+|+||+|+.... +. ... . +.+-.+.
T Consensus 448 g~P~VVllHG~~g~~--~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAK--ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCH--HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 468999999955433 2355666788889999999999999976322 00 000 0 1122455
Q ss_pred HhHHHHHHHHHH------Hc----CCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 576 FTDFIACAEYLI------KN----CYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 576 ~~D~~~~~~~l~------~~----~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
+.|+......|. .+ +-.+..++.++|||+||++...++..
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 677777777665 11 12456899999999999998877764
No 203
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.90 E-value=0.00052 Score=65.88 Aligned_cols=184 Identities=17% Similarity=0.152 Sum_probs=108.1
Q ss_pred CCCEEEEecCCCccCCCCCCChHH---HHHHHcCcEEEEEecCC------C----C----------CC-chhHHhccc-c
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSR---LSLLDRGFIFAIAQIRG------G----G----------EL-GRQWYENGK-F 569 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~---~~l~~~G~~v~~~~~RG------~----g----------~~-G~~~~~~~~-~ 569 (758)
+.|-||++|| -......|+.-. ..++.+=+-.+.++-+- . + +. -..|..... .
T Consensus 4 ~k~rvLcLHG--frQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHG--FRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecc--hhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 4578999999 333344454322 22222225555555441 0 0 11 134554433 2
Q ss_pred cCCcChHhH-HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC--CC------ceeEEEEcCCccchhhccCCCC
Q 004368 570 LKKKNTFTD-FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR--PD------LFKAAVAAVPFVDVLTTMLDPT 640 (758)
Q Consensus 570 ~~~~~~~~D-~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--p~------~f~a~v~~~~~~d~~~~~~~~~ 640 (758)
......++. +....+|+.++|-.| ||.|+|.|+.|++.+++.. .. -|+-+|..+|+.-.
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~-------- 149 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP-------- 149 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC--------
Confidence 223333444 555667888888876 8999999999999988821 11 36777777775321
Q ss_pred CCCChhhhhccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCC
Q 004368 641 IPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELG 720 (758)
Q Consensus 641 ~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 720 (758)
+.+.+... ....+++| .|-+.|+.|..||...+..+++....+ .++.. .
T Consensus 150 -----------~~~~~~~~-----------~~~~i~~P-SLHi~G~~D~iv~~~~s~~L~~~~~~a-----~vl~H---p 198 (230)
T KOG2551|consen 150 -----------SKKLDESA-----------YKRPLSTP-SLHIFGETDTIVPSERSEQLAESFKDA-----TVLEH---P 198 (230)
T ss_pred -----------cchhhhhh-----------hccCCCCC-eeEEecccceeecchHHHHHHHhcCCC-----eEEec---C
Confidence 00001111 12245788 788889999999999999999987654 33443 7
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhc
Q 004368 721 AGHFSKSGRFERLREAAFTYTFLMRAL 747 (758)
Q Consensus 721 ~gH~~~~~~~~~~~~~~~~~~fl~~~l 747 (758)
+||...... ...+. +.+||...+
T Consensus 199 ggH~VP~~~-~~~~~---i~~fi~~~~ 221 (230)
T KOG2551|consen 199 GGHIVPNKA-KYKEK---IADFIQSFL 221 (230)
T ss_pred CCccCCCch-HHHHH---HHHHHHHHH
Confidence 899876544 33333 456665543
No 204
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.89 E-value=0.0017 Score=63.32 Aligned_cols=177 Identities=13% Similarity=0.107 Sum_probs=97.6
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQS 273 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~ 273 (758)
...|||||++++++... -.|-++|..+-+.... ...-......|.-++.+||.+..- ..-++. .-.+-
T Consensus 111 ~i~wsp~g~~~~~~~kd-----D~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~Gl--G~v~IL--sypsL-- 179 (313)
T KOG1407|consen 111 NITWSPDGEYIAVGNKD-----DRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGL--GCVEIL--SYPSL-- 179 (313)
T ss_pred EEEEcCCCCEEEEecCc-----ccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCC--ceEEEE--ecccc--
Confidence 56899999999986542 3577778776665542 222224568898777677765432 122222 22211
Q ss_pred CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEEEEEcCCCC
Q 004368 274 NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSDEL 352 (758)
Q Consensus 274 ~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~ 352 (758)
+.+.-.. ..+.-.+.+.++|||||+++.+.+. -+-++|++.---.+.+......+. ..||+||+.|+-.+.+
T Consensus 180 kpv~si~-AH~snCicI~f~p~GryfA~GsADA---lvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSED--- 252 (313)
T KOG1407|consen 180 KPVQSIK-AHPSNCICIEFDPDGRYFATGSADA---LVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASED--- 252 (313)
T ss_pred ccccccc-cCCcceEEEEECCCCceEeeccccc---eeeccChhHhhhheeeccccCceEEEEeccCcceeeccCcc---
Confidence 1221111 2334455788999999998865542 234556653222334433333343 3599999977755432
Q ss_pred CCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEE
Q 004368 353 FNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 394 (758)
Q Consensus 353 ~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 394 (758)
.-|-.+.+++ +..-|-++.... .-.+.|..++.++.+
T Consensus 253 --h~IDIA~vet-Gd~~~eI~~~~~--t~tVAWHPk~~LLAy 289 (313)
T KOG1407|consen 253 --HFIDIAEVET-GDRVWEIPCEGP--TFTVAWHPKRPLLAY 289 (313)
T ss_pred --ceEEeEeccc-CCeEEEeeccCC--ceeEEecCCCceeeE
Confidence 2344445555 345565555433 235666666544443
No 205
>PTZ00420 coronin; Provisional
Probab=97.88 E-value=0.0029 Score=71.58 Aligned_cols=158 Identities=11% Similarity=0.079 Sum_probs=89.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
.+..+.|+|++..++.+...+| .|.|||+.+++.... .......+++|+|||.++.++..+ ..|.++++.+
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~Dg----tIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D----~~IrIwD~Rs 198 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDS----FVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVG----KHMHIIDPRK 198 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCC----eEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecC----CEEEEEECCC
Confidence 5778999999998766654444 799999999875432 223345679999999554444322 2477888876
Q ss_pred CCCCcEEEeeecCCce----eeEEEEcCCCcEEEEEecCC-cceEEEEEeCCCCC-ceEEeec-cccc-eeeEEeecCCE
Q 004368 271 DQSNDICLYHEKDDIY----SLGLQASESKKFLFIASESK-ITRFVFYLDVSKPE-ELRVLTP-RVVG-VDTAASHRGNH 342 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~----~~~~~~S~Dg~~l~~~s~~~-~~~~l~~~d~~~~~-~~~~l~~-~~~~-~~~~~s~dg~~ 342 (758)
+. ....+....... .....+++|+++|+....+. ..+.|.++|+.+.. .+..+.- ...+ ....++++.+.
T Consensus 199 g~--~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~ 276 (568)
T PTZ00420 199 QE--IASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGL 276 (568)
T ss_pred Cc--EEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCC
Confidence 52 222333222211 11123568999887665544 33578888987533 2322211 1112 22345666555
Q ss_pred EEEEEcCCCCCCcEEEEEeCC
Q 004368 343 FFITRRSDELFNSELLACPVD 363 (758)
Q Consensus 343 l~~~s~~~~~~~~~L~~~~~~ 363 (758)
+|+....+ ..+..+++.
T Consensus 277 l~lsGkGD----~tIr~~e~~ 293 (568)
T PTZ00420 277 IYLIGKGD----GNCRYYQHS 293 (568)
T ss_pred EEEEEECC----CeEEEEEcc
Confidence 55444333 345555553
No 206
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.86 E-value=0.0037 Score=64.05 Aligned_cols=65 Identities=26% Similarity=0.381 Sum_probs=47.6
Q ss_pred eEEeecccccCCC---C-eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc---ceeEEEec
Q 004368 176 HLILDENVKAEGR---G-FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV---TASVEWAG 245 (758)
Q Consensus 176 ~vllD~n~~~~~~---~-~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~---~~~~~wsp 245 (758)
--|.|+++..+-+ | +..+-.++|||||++|| .|....+|.+||.++|+..-.++.+. +.+++|-|
T Consensus 139 vR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iA-----SG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep 210 (480)
T KOG0271|consen 139 VRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIA-----SGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEP 210 (480)
T ss_pred EEeeccCCCCcceeecCCccEEEEEEECCCcchhh-----ccccCCeEEEecCCCCCcccccccCcccceeEEeecc
Confidence 4568887765322 2 34778899999999999 45555689999999998876566543 56689965
No 207
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.86 E-value=0.00024 Score=74.22 Aligned_cols=199 Identities=13% Similarity=0.165 Sum_probs=116.8
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
-++..+.+|||+++||+.-. ...|+++...|++.... .+++....+.|+.||+.++.....+ +||.++|+
T Consensus 304 ~~~e~FeVShd~~fia~~G~-----~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~G----eV~v~nl~ 374 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAGN-----NGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTG----EVYVWNLR 374 (514)
T ss_pred chhheeEecCCCCeEEEccc-----CceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCc----eEEEEecC
Confidence 47788999999999987533 34699999999987653 6788888899999994444433222 69999998
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeC--CCCCceEEeecc---cccee-eEEeecCCEE
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV--SKPEELRVLTPR---VVGVD-TAASHRGNHF 343 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~--~~~~~~~~l~~~---~~~~~-~~~s~dg~~l 343 (758)
.. .-+..|.....-...++..|.+|+|++..+.+. --.||-.+. .+. .++++..- ...+. ..|+||++.|
T Consensus 375 ~~--~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~G-iVNIYd~~s~~~s~-~PkPik~~dNLtt~Itsl~Fn~d~qiL 450 (514)
T KOG2055|consen 375 QN--SCLHRFVDDGSVHGTSLCISLNGSYLATGSDSG-IVNIYDGNSCFAST-NPKPIKTVDNLTTAITSLQFNHDAQIL 450 (514)
T ss_pred Cc--ceEEEEeecCccceeeeeecCCCceEEeccCcc-eEEEeccchhhccC-CCCchhhhhhhheeeeeeeeCcchhhh
Confidence 76 333445444444455677899999888755442 234443221 111 23443221 11222 3499999999
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceee--eEEEeCCEEEEEEEeCCeeEEEEEEc
Q 004368 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQ--DIQLFIDHLAVYEREGGLQKITTYRL 407 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~l~~~~~~~g~~~l~v~~l 407 (758)
++.++.. ....+|+-++--+ --.+|-.....-..+. +|++.+.++. ..++.|. +.+|.|
T Consensus 451 AiaS~~~-knalrLVHvPS~T-VFsNfP~~n~~vg~vtc~aFSP~sG~lA-vGNe~gr--v~l~kL 511 (514)
T KOG2055|consen 451 AIASRVK-KNALRLVHVPSCT-VFSNFPTSNTKVGHVTCMAFSPNSGYLA-VGNEAGR--VHLFKL 511 (514)
T ss_pred hhhhhcc-ccceEEEecccee-eeccCCCCCCcccceEEEEecCCCceEE-eecCCCc--eeeEee
Confidence 9998875 3345666554322 1123322222111233 3444444554 4455554 445554
No 208
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.85 E-value=0.00025 Score=70.97 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=84.0
Q ss_pred EEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCC
Q 004368 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQ 272 (758)
Q Consensus 196 ~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~ 272 (758)
..+||+|++||-.++ +.+.|+|..|=+..++ -+.. +..+.|+.|+ .++.....+. .|....+...
T Consensus 14 c~fSp~g~yiAs~~~------yrlviRd~~tlq~~qlf~cldk-i~yieW~ads~~ilC~~yk~~----~vqvwsl~Qp- 81 (447)
T KOG4497|consen 14 CSFSPCGNYIASLSR------YRLVIRDSETLQLHQLFLCLDK-IVYIEWKADSCHILCVAYKDP----KVQVWSLVQP- 81 (447)
T ss_pred eeECCCCCeeeeeee------eEEEEeccchhhHHHHHHHHHH-hhheeeeccceeeeeeeeccc----eEEEEEeecc-
Confidence 478999999997764 7899999988766654 2233 3448999999 6666655432 2444555433
Q ss_pred CCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEee-ccccceeeEEeecCCEEEEEEcCC
Q 004368 273 SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDTAASHRGNHFFITRRSD 350 (758)
Q Consensus 273 ~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~~~s~dg~~l~~~s~~~ 350 (758)
+-..-.+++... ...++||||||.|+..+.=. .+|-+..+.+.+ -..+. +...--.+.+.+||+..++.+.++
T Consensus 82 -ew~ckIdeg~ag-ls~~~WSPdgrhiL~tseF~--lriTVWSL~t~~-~~~~~~pK~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 82 -EWYCKIDEGQAG-LSSISWSPDGRHILLTSEFD--LRITVWSLNTQK-GYLLPHPKTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred -eeEEEeccCCCc-ceeeeECCCcceEeeeecce--eEEEEEEeccce-eEEecccccCceeEEECCCCceeeeeeccc
Confidence 222222332222 33678999999998765433 333344444433 11111 111112456899999999998886
No 209
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.84 E-value=0.00033 Score=74.05 Aligned_cols=176 Identities=16% Similarity=0.162 Sum_probs=107.4
Q ss_pred HhHHHHHHHHHHHcCCCCC--CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccch-hhccCCCCCCC---------
Q 004368 576 FTDFIACAEYLIKNCYCTK--EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDV-LTTMLDPTIPL--------- 643 (758)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~--~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~-~~~~~~~~~~~--------- 643 (758)
..|++.|+.+|.+.-.... -++.++|+|+||||+..++--.|.+|.+++-.++.+-. +++.....+.+
T Consensus 163 AiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~ 242 (403)
T PF11144_consen 163 AIDIINALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEF 242 (403)
T ss_pred HHHHHHHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccc
Confidence 4688888888887733333 48999999999999999999999999999977765432 22211111110
Q ss_pred -----------Chhhh-hccCCCC--CHHHHHHHHhcCcccccC---CC-CCCeEEEeccCCCCCCCChHHHHHHHHHHh
Q 004368 644 -----------TTAEW-EEWGDPW--KEEFYFYMKSYSPVDNVK---AQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLRE 705 (758)
Q Consensus 644 -----------~~~~~-~e~g~p~--~~~~~~~l~~~sp~~~i~---~~-~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~ 705 (758)
....| ..-+.|. .++.+ .+|...-..++. +. +-|-....|+..|+.+|+.+-.+++..|++
T Consensus 243 ~~~~~~~i~~~~Kt~Wt~n~~S~~~Fs~~~~-~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~ 321 (403)
T PF11144_consen 243 FNFKNIRIYCFDKTFWTRNKNSPYYFSKARY-IIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKN 321 (403)
T ss_pred cccCCEEEEEEeccccccCCCCccccChHHH-HHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHH
Confidence 00011 1112331 22222 233321112111 11 234456679999999999999999999999
Q ss_pred cCCCCceEEEEec--------CCCCCCCCCChHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 004368 706 MKTDDNILLFKCE--------LGAGHFSKSGRFERLREAAFTYTFLMRALSMLPSVGS 755 (758)
Q Consensus 706 ~~~~~~~~~~~~~--------~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~~~ 755 (758)
.|-++++.+++.+ .+-.|+.+..-...++. ++.-+++.+........
T Consensus 322 lgfda~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~K---eLp~~lek~~~~~~~~~ 376 (403)
T PF11144_consen 322 LGFDATLHLIKDESEIDGKFIKNLEHGMGISDKALFKK---ELPLMLEKLQGRKSKMC 376 (403)
T ss_pred cCCCeEEEEecChhhccchheeccccCCCCCHHHHHHH---HhHHHHHHhhccccccc
Confidence 9999988888321 14567766554444433 46666666654444333
No 210
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=97.82 E-value=0.00057 Score=76.03 Aligned_cols=194 Identities=15% Similarity=0.103 Sum_probs=111.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc--ceeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
.+.+.++|||.++|. +.+|..++++|.+.+-.-+..--... ...+.|+|-|. ||.+. ..++-.+||..+-
T Consensus 453 PVyg~sFsPd~rfLl-----ScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~Gy-YFata-s~D~tArLWs~d~- 524 (707)
T KOG0263|consen 453 PVYGCSFSPDRRFLL-----SCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGY-YFATA-SHDQTARLWSTDH- 524 (707)
T ss_pred ceeeeeeccccccee-----eccCCcceeeeecccceeEEEecCCCcceeeEEecCCce-EEEec-CCCceeeeeeccc-
Confidence 456789999999986 34456788889888866544211111 44578899883 33333 2234446775432
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEEEc
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRR 348 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 348 (758)
.....+|...-.... .+.+.|+..|++-.+. +. .+.++|..+|...+.++.+..-+.. .+||+|++|+-.
T Consensus 525 ---~~PlRifaghlsDV~-cv~FHPNs~Y~aTGSs-D~--tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg-- 595 (707)
T KOG0263|consen 525 ---NKPLRIFAGHLSDVD-CVSFHPNSNYVATGSS-DR--TVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASG-- 595 (707)
T ss_pred ---CCchhhhcccccccc-eEEECCcccccccCCC-Cc--eEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeec--
Confidence 234556654432221 3679999999765432 22 3455577666645555555444444 399999876543
Q ss_pred CCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+..+.|..+|+.+......+..+.. .+-++++..+.-++.. ..+...+.+|++.
T Consensus 596 ---~ed~~I~iWDl~~~~~v~~l~~Ht~--ti~SlsFS~dg~vLas-gg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 596 ---DEDGLIKIWDLANGSLVKQLKGHTG--TIYSLSFSRDGNVLAS-GGADNSVRLWDLT 649 (707)
T ss_pred ---ccCCcEEEEEcCCCcchhhhhcccC--ceeEEEEecCCCEEEe-cCCCCeEEEEEch
Confidence 2246788889876332223555533 3444444443333222 2334558888876
No 211
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=97.80 E-value=0.035 Score=54.98 Aligned_cols=197 Identities=14% Similarity=0.093 Sum_probs=113.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC-----CceeeccccC---cceeEEEecCCeEEEEEeCCCCCCceE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-----GTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKA 263 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~-----g~~~~~~~~~---~~~~~~wspDg~l~y~~~~~~~~~~~v 263 (758)
.+...+..+++.-+.+..+++ -.+.+|+|.. |.+++ .+.+ ..+.++-|+||.+++...-+ ..+
T Consensus 17 ~Vt~la~~~~~~~~l~sasrD----k~ii~W~L~~dd~~~G~~~r-~~~GHsH~v~dv~~s~dg~~alS~swD----~~l 87 (315)
T KOG0279|consen 17 WVTALAIKIKNSDILVSASRD----KTIIVWKLTSDDIKYGVPVR-RLTGHSHFVSDVVLSSDGNFALSASWD----GTL 87 (315)
T ss_pred eEEEEEeecCCCceEEEcccc----eEEEEEEeccCccccCceee-eeeccceEecceEEccCCceEEecccc----ceE
Confidence 455667777777777776653 4677777755 33333 3333 35678999999777665432 248
Q ss_pred EEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecc-ccceeeE-EeecCC
Q 004368 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-VVGVDTA-ASHRGN 341 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~-~s~dg~ 341 (758)
+++++.++ +....|... ..-.+++++|+|.+.|+-. ....+ |-+++.-+....+..... .+.+... |+|...
T Consensus 88 rlWDl~~g--~~t~~f~GH-~~dVlsva~s~dn~qivSG-SrDkT--iklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~ 161 (315)
T KOG0279|consen 88 RLWDLATG--ESTRRFVGH-TKDVLSVAFSTDNRQIVSG-SRDKT--IKLWNTLGVCKYTIHEDSHREWVSCVRFSPNES 161 (315)
T ss_pred EEEEecCC--cEEEEEEec-CCceEEEEecCCCceeecC-CCcce--eeeeeecccEEEEEecCCCcCcEEEEEEcCCCC
Confidence 88899887 345556543 3345688999999997632 22222 444455443212222111 2334443 899876
Q ss_pred EEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 342 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 342 ~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
..++++... ..-|-+.|+++....+-.+.+.....--.+++++.-+. ..-++| ++.+|+++.
T Consensus 162 ~p~Ivs~s~---DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslca-sGgkdg--~~~LwdL~~ 223 (315)
T KOG0279|consen 162 NPIIVSASW---DKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCA-SGGKDG--EAMLWDLNE 223 (315)
T ss_pred CcEEEEccC---CceEEEEccCCcchhhccccccccEEEEEECCCCCEEe-cCCCCc--eEEEEEccC
Confidence 677776543 13455667766333333555554444444555554443 333444 467889884
No 212
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.80 E-value=0.00044 Score=63.96 Aligned_cols=122 Identities=17% Similarity=0.246 Sum_probs=82.7
Q ss_pred cCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhh
Q 004368 570 LKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWE 649 (758)
Q Consensus 570 ~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~ 649 (758)
.+....++|-++.++.-+.. -++.+.+++||.|+.+++..+.+.-..++++++.+|+ |+-+.+.
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a---~~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVApp-d~~~~~~------------ 100 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNA---AEGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPP-DVSRPEI------------ 100 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhc---cCCCeEEEEecccHHHHHHHHHhhhhccceEEEecCC-Ccccccc------------
Confidence 34456678888777655543 2566999999999999999998876678888888885 3222110
Q ss_pred ccCCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Q 004368 650 EWGDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 726 (758)
Q Consensus 650 e~g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 726 (758)
.+ ..+..++|+... +...| .+++++.||+.|+++++..+++++-.. ++... ++||.+.
T Consensus 101 ------~~---~~~~tf~~~p~~-~lpfp-s~vvaSrnDp~~~~~~a~~~a~~wgs~-----lv~~g---~~GHiN~ 158 (181)
T COG3545 101 ------RP---KHLMTFDPIPRE-PLPFP-SVVVASRNDPYVSYEHAEDLANAWGSA-----LVDVG---EGGHINA 158 (181)
T ss_pred ------ch---hhccccCCCccc-cCCCc-eeEEEecCCCCCCHHHHHHHHHhccHh-----heecc---cccccch
Confidence 00 112234555433 33566 788899999999999999998887543 33343 6788654
No 213
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.79 E-value=0.00026 Score=72.50 Aligned_cols=119 Identities=18% Similarity=0.212 Sum_probs=82.9
Q ss_pred eeEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCC-----CCChHHHHHHH-cCcEEEEEecCCCCC
Q 004368 485 FTERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDP-----AFNSSRLSLLD-RGFIFAIAQIRGGGE 558 (758)
Q Consensus 485 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~-----~~~~~~~~l~~-~G~~v~~~~~RG~g~ 558 (758)
.++++.+.. |+..|....+.-++. ++.-.||+.-|- +..... .....+..++. .|..|++.||||-|.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a----~~~RWiL~s~GN-g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~ 184 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA----KPQRWILVSNGN-GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGS 184 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC----CCCcEEEEEcCC-hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCcccc
Confidence 457777775 999999987764443 456678887663 222111 12334555655 599999999999764
Q ss_pred CchhHHhcccccCCcChHhHHHHHHHHHHHcC-CCCCCcEEEEEeChhHHHHHHHHhhC
Q 004368 559 LGRQWYENGKFLKKKNTFTDFIACAEYLIKNC-YCTKEKLCIEGRSAGGLLIGAVLNMR 616 (758)
Q Consensus 559 ~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~ 616 (758)
+-. . .....-+.|..+|++||.++. .+.+++|.+.|+|.||.+++.++.++
T Consensus 185 S~G------~-~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 185 STG------P-PSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred CCC------C-CCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 421 1 122345688899999998753 46899999999999999988877664
No 214
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.79 E-value=0.0027 Score=71.09 Aligned_cols=197 Identities=18% Similarity=0.225 Sum_probs=109.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCc--eeeccccC---cceeEEEecCCeEEEEEeCCCCCCceEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT--PVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWL 265 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~--~~~~~~~~---~~~~~~wspDg~l~y~~~~~~~~~~~v~~ 265 (758)
.++....+||||++++.+... ..++++++.+++ ... .+.+ .+..+.|||||+++....++ ..+++
T Consensus 160 ~sv~~~~fs~~g~~l~~~~~~-----~~i~~~~~~~~~~~~~~-~l~~h~~~v~~~~fs~d~~~l~s~s~D----~tiri 229 (456)
T KOG0266|consen 160 PSVTCVDFSPDGRALAAASSD-----GLIRIWKLEGIKSNLLR-ELSGHTRGVSDVAFSPDGSYLLSGSDD----KTLRI 229 (456)
T ss_pred CceEEEEEcCCCCeEEEccCC-----CcEEEeecccccchhhc-cccccccceeeeEECCCCcEEEEecCC----ceEEE
Confidence 456668999999998876542 357778876666 322 2222 26679999999644444333 25777
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFF 344 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~ 344 (758)
+++.... .-..++. ....+..++.++|+|+ ++++.....+ |.++|+.+++..+.+......+.. .++++|..|+
T Consensus 230 wd~~~~~-~~~~~l~-gH~~~v~~~~f~p~g~-~i~Sgs~D~t--vriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 230 WDLKDDG-RNLKTLK-GHSTYVTSVAFSPDGN-LLVSGSDDGT--VRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred eeccCCC-eEEEEec-CCCCceEEEEecCCCC-EEEEecCCCc--EEEEeccCCeEEEeeeccCCceEEEEECCCCCEEE
Confidence 7873221 2233333 3444556788999995 4454444443 556677766534445555545443 4888888766
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCc--ceeeecCCCCceeeeEEEeCCEEEEEE-EeCCeeEEEEEEcCC
Q 004368 345 ITRRSDELFNSELLACPVDNTSE--TTVLIPHRESVKLQDIQLFIDHLAVYE-REGGLQKITTYRLPA 409 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~l~v~~l~~ 409 (758)
..+. + +.|..+|+.+... ...+........+..+.+..+..++.. ..++ .+.+|++..
T Consensus 305 s~s~-d----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~--~~~~w~l~~ 365 (456)
T KOG0266|consen 305 SASY-D----GTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDR--TLKLWDLRS 365 (456)
T ss_pred EcCC-C----ccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCC--eEEEEEccC
Confidence 5522 2 4677778776321 111222222212334444444333332 2233 367777763
No 215
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.76 E-value=0.00036 Score=70.79 Aligned_cols=104 Identities=18% Similarity=0.227 Sum_probs=66.0
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc-c-cCcceeEEEecCC-eEEEEEeCCCCCCceEE-
Q 004368 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-L-VGVTASVEWAGNE-ALVYITMDEILRPDKAW- 264 (758)
Q Consensus 189 ~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~-~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~- 264 (758)
|+.-+.+++|.+||..++=.+- | ...|.|||+++|.-.++. . .+.++-+.||||| .||..+.|.. ..||
T Consensus 194 gh~pVtsmqwn~dgt~l~tAS~--g--sssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~dav---frlw~ 266 (445)
T KOG2139|consen 194 GHNPVTSMQWNEDGTILVTASF--G--SSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV---FRLWQ 266 (445)
T ss_pred CCceeeEEEEcCCCCEEeeccc--C--cceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccce---eeeeh
Confidence 3456889999999999874443 3 367999999999877653 2 2235568999999 6766665542 3455
Q ss_pred EEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecC
Q 004368 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES 305 (758)
Q Consensus 265 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~ 305 (758)
.++.-+. +.. +... ...-...|||+|++|+|....
T Consensus 267 e~q~wt~--erw-~lgs---grvqtacWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 267 ENQSWTK--ERW-ILGS---GRVQTACWSPCGSFLLFACSG 301 (445)
T ss_pred hccccee--cce-eccC---CceeeeeecCCCCEEEEEEcC
Confidence 2222222 122 2211 122245699999999997643
No 216
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=97.75 E-value=0.00035 Score=72.25 Aligned_cols=192 Identities=17% Similarity=0.132 Sum_probs=108.5
Q ss_pred EEeeEEECCC--CCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 192 SVGCFQVSPD--NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 192 ~i~~~~~SPD--G~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
.++.+.|+|. +.-||=. .. ...+.+|++++.+++. .+++ ..+.++|.|+| .|.-.+.|..++ +
T Consensus 219 ~v~~~~fhP~~~~~~lat~-s~----Dgtvklw~~~~e~~l~-~l~gH~~RVs~VafHPsG~~L~TasfD~tWR---l-- 287 (459)
T KOG0272|consen 219 RVGAAVFHPVDSDLNLATA-SA----DGTVKLWKLSQETPLQ-DLEGHLARVSRVAFHPSGKFLGTASFDSTWR---L-- 287 (459)
T ss_pred ceeeEEEccCCCccceeee-cc----CCceeeeccCCCcchh-hhhcchhhheeeeecCCCceeeecccccchh---h--
Confidence 5778899998 5555522 22 3468899998876665 3333 26779999999 555555666543 3
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFF 344 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~ 344 (758)
+++.++ .++++.++...-..+++|.+||.-+ .+..-....+|| |+.++...-.|......+. ..|||+|-+++
T Consensus 288 WD~~tk---~ElL~QEGHs~~v~~iaf~~DGSL~-~tGGlD~~~RvW--DlRtgr~im~L~gH~k~I~~V~fsPNGy~lA 361 (459)
T KOG0272|consen 288 WDLETK---SELLLQEGHSKGVFSIAFQPDGSLA-ATGGLDSLGRVW--DLRTGRCIMFLAGHIKEILSVAFSPNGYHLA 361 (459)
T ss_pred cccccc---hhhHhhcccccccceeEecCCCcee-eccCccchhhee--ecccCcEEEEecccccceeeEeECCCceEEe
Confidence 466665 3456666665555688999999754 333333345555 7777652223333333333 34999987665
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCC-ceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
--+.++ .-+| .|+..... .-++|...+ +.-..+++..+..++++..+...+ +|.-.
T Consensus 362 Tgs~Dn---t~kV--WDLR~r~~-ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~k--iWs~~ 418 (459)
T KOG0272|consen 362 TGSSDN---TCKV--WDLRMRSE-LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVK--IWSTR 418 (459)
T ss_pred ecCCCC---cEEE--eeeccccc-ceecccccchhhheEecccCCeEEEEcccCccee--eecCC
Confidence 443332 2344 45543212 124443322 222234444456666777666544 55433
No 217
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.73 E-value=0.00027 Score=66.88 Aligned_cols=155 Identities=14% Similarity=0.184 Sum_probs=92.5
Q ss_pred HHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC
Q 004368 537 SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (758)
Q Consensus 537 ~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 616 (758)
....|+++|+.|+.+|-+ +-|.. ...-.....|+...+++..++.. .+++.++|.|+|+-++-.+.++-
T Consensus 21 ~a~~l~~~G~~VvGvdsl------~Yfw~---~rtP~~~a~Dl~~~i~~y~~~w~--~~~vvLiGYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSL------RYFWS---ERTPEQTAADLARIIRHYRARWG--RKRVVLIGYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHHHCCCeEEEechH------HHHhh---hCCHHHHHHHHHHHHHHHHHHhC--CceEEEEeecCCchhHHHHHhhC
Confidence 456899999999999954 11111 12223556888888888877754 48999999999999999999998
Q ss_pred CCce----eEEEEcCCccchhhccCCCCCCCChhhhhcc-CCCCCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCC
Q 004368 617 PDLF----KAAVAAVPFVDVLTTMLDPTIPLTTAEWEEW-GDPWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRV 691 (758)
Q Consensus 617 p~~f----~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~-g~p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V 691 (758)
|... +.+++.+|- ... ++.... ..| |..... ..+.+..-++++...+++++.|..|.-.
T Consensus 90 p~~~r~~v~~v~Ll~p~----~~~---dFeihv---~~wlg~~~~~------~~~~~~pei~~l~~~~v~CiyG~~E~d~ 153 (192)
T PF06057_consen 90 PAALRARVAQVVLLSPS----TTA---DFEIHV---SGWLGMGGDD------AAYPVIPEIAKLPPAPVQCIYGEDEDDS 153 (192)
T ss_pred CHHHHhheeEEEEeccC----Ccc---eEEEEh---hhhcCCCCCc------ccCCchHHHHhCCCCeEEEEEcCCCCCC
Confidence 8644 444444442 110 110111 122 222111 1234444555664445999999887642
Q ss_pred CChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHH
Q 004368 692 MYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFE 731 (758)
Q Consensus 692 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~ 731 (758)
.. -.|+.. ..+.+.++ +||.+..+...
T Consensus 154 ~c-------p~l~~~--~~~~i~lp----GgHHfd~dy~~ 180 (192)
T PF06057_consen 154 LC-------PSLRQP--GVEVIALP----GGHHFDGDYDA 180 (192)
T ss_pred cC-------ccccCC--CcEEEEcC----CCcCCCCCHHH
Confidence 21 123332 45566664 77877655433
No 218
>PTZ00421 coronin; Provisional
Probab=97.73 E-value=0.0065 Score=68.13 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=90.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-c-ccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
.+..+.|+|++..+..+... ...|+|||+.+++.... . -.+....++|+|||.++++...+ ..|.++++.
T Consensus 127 ~V~~l~f~P~~~~iLaSgs~----DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D----g~IrIwD~r 198 (493)
T PTZ00421 127 KVGIVSFHPSAMNVLASAGA----DMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD----KKLNIIDPR 198 (493)
T ss_pred cEEEEEeCcCCCCEEEEEeC----CCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC----CEEEEEECC
Confidence 57788999997533333332 24799999999876542 1 12235669999999554554332 247788887
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecC-CcceEEEEEeCCCCC-ceEEeeccc-cce-eeEEeecCCEEEE
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPE-ELRVLTPRV-VGV-DTAASHRGNHFFI 345 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~-~~~~~l~~~d~~~~~-~~~~l~~~~-~~~-~~~~s~dg~~l~~ 345 (758)
++. ....+..........+.|.+++..|+....+ .....|.++|+.+.. ......... ... ...++++++.|++
T Consensus 199 sg~--~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~l 276 (493)
T PTZ00421 199 DGT--IVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYI 276 (493)
T ss_pred CCc--EEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEE
Confidence 652 2222222222222345688988776644432 234678888887644 222221111 112 2347889987776
Q ss_pred EEcCCCCCCcEEEEEeCCC
Q 004368 346 TRRSDELFNSELLACPVDN 364 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~ 364 (758)
....+ ..|..+++.+
T Consensus 277 ggkgD----g~Iriwdl~~ 291 (493)
T PTZ00421 277 GSKGE----GNIRCFELMN 291 (493)
T ss_pred EEeCC----CeEEEEEeeC
Confidence 65333 3455556544
No 219
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.68 E-value=0.00064 Score=68.85 Aligned_cols=209 Identities=19% Similarity=0.162 Sum_probs=110.1
Q ss_pred EEEEecCCCccCCCCCCChHHHHHH-HcCcE--EEEEec--CCCCCCchhHHhcc-------cccCCc-----ChHhHHH
Q 004368 518 LLLYGYGSYEICNDPAFNSSRLSLL-DRGFI--FAIAQI--RGGGELGRQWYENG-------KFLKKK-----NTFTDFI 580 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~--v~~~~~--RG~g~~G~~~~~~~-------~~~~~~-----~~~~D~~ 580 (758)
..||+||..+. ...|...+..+. ..|.+ ++.+++ -|.-.+...|.... ...... ....=+.
T Consensus 13 PTifihG~~gt--~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 13 PTIFIHGYGGT--ANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp EEEEE--TTGG--CCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred cEEEECCCCCC--hhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 35567884443 445888888887 66544 444443 44333333332211 112222 1233456
Q ss_pred HHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC------CCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCC
Q 004368 581 ACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDP 654 (758)
Q Consensus 581 ~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p 654 (758)
.++.+|.++..+ +++-++||||||..+...+..+ |.+=+.+.+..||-.........+. .....-| |
T Consensus 91 ~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~----~~~~~~g-p 163 (255)
T PF06028_consen 91 KVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQ----NDLNKNG-P 163 (255)
T ss_dssp HHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTT----T-CSTT--B
T ss_pred HHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchh----hhhcccC-C
Confidence 688888888665 8999999999999988888774 3344555566665443322111111 1112235 5
Q ss_pred -CCHHHHHHHHhc-CcccccCCCCCCeEEEeccC------CCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCC
Q 004368 655 -WKEEFYFYMKSY-SPVDNVKAQNYPHILVTAGL------NDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSK 726 (758)
Q Consensus 655 -~~~~~~~~l~~~-sp~~~i~~~~~P~~Li~~G~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 726 (758)
...+.|+.|.+. . .++.+ .. .||-|.|. .|-+||...++.+..-++......+-+.+.- .++.|..-
T Consensus 164 ~~~~~~y~~l~~~~~--~~~p~-~i-~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G-~~a~HS~L 238 (255)
T PF06028_consen 164 KSMTPMYQDLLKNRR--KNFPK-NI-QVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTG-KDAQHSQL 238 (255)
T ss_dssp SS--HHHHHHHHTHG--GGSTT-T--EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEES-GGGSCCGG
T ss_pred cccCHHHHHHHHHHH--hhCCC-Ce-EEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEEC-CCCccccC
Confidence 344556665543 1 22222 23 38999998 8999999888877777766655556666652 24678654
Q ss_pred CChHHHHHHHHHHHHHH
Q 004368 727 SGRFERLREAAFTYTFL 743 (758)
Q Consensus 727 ~~~~~~~~~~~~~~~fl 743 (758)
....+..+. +..||
T Consensus 239 heN~~V~~~---I~~FL 252 (255)
T PF06028_consen 239 HENPQVDKL---IIQFL 252 (255)
T ss_dssp GCCHHHHHH---HHHHH
T ss_pred CCCHHHHHH---HHHHh
Confidence 334443333 35565
No 220
>PRK10115 protease 2; Provisional
Probab=97.66 E-value=0.025 Score=66.49 Aligned_cols=204 Identities=9% Similarity=0.008 Sum_probs=115.0
Q ss_pred EEeCcEEEEEEecCCCeeEEEEEEecCCCCCCCCccccCCCCCCCCCceEEeecccccCCCCeEEEeeEEECCCCCEEEE
Q 004368 128 FRQGSYYYYTRTLEGKEYVQHCRRLIHNNEAPPSVHDTMETGPDAPPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAY 207 (758)
Q Consensus 128 ~~~g~~~y~~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy 207 (758)
++.|.++.|.....|.+...++.+...++ ++|.++ +.. .. ..+.|++||+.|.|
T Consensus 135 Spdg~~la~~~d~~G~E~~~l~v~d~~tg-------------------~~l~~~--i~~----~~-~~~~w~~D~~~~~y 188 (686)
T PRK10115 135 TPDNTIMALAEDFLSRRQYGIRFRNLETG-------------------NWYPEL--LDN----VE-PSFVWANDSWTFYY 188 (686)
T ss_pred CCCCCEEEEEecCCCcEEEEEEEEECCCC-------------------CCCCcc--ccC----cc-eEEEEeeCCCEEEE
Confidence 46788888998888888887777655322 112221 111 11 34799999999999
Q ss_pred EEeCCC-CeEEEEEEEECCCCc--eeec-c-ccCcceeEEEec-CC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEee
Q 004368 208 AEDTKG-DEIYTVYVIDIETGT--PVGK-P-LVGVTASVEWAG-NE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH 280 (758)
Q Consensus 208 ~~~~~G-~e~~~l~v~dl~~g~--~~~~-~-~~~~~~~~~wsp-Dg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~ 280 (758)
+....+ ....+||.+++.++. ...+ . ..+...-..|.+ |+ .++....... ..++++.+......+...+..
T Consensus 189 ~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~--~~~~~l~~~~~~~~~~~~~~~ 266 (686)
T PRK10115 189 VRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASAT--TSEVLLLDAELADAEPFVFLP 266 (686)
T ss_pred EEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCc--cccEEEEECcCCCCCceEEEE
Confidence 987543 245789999999983 2221 1 111122134555 77 5543333222 234666664222122333433
Q ss_pred ecCCceeeEEEEcCCCcEEEEEecC-CcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEcCCCCCCcEEE
Q 004368 281 EKDDIYSLGLQASESKKFLFIASES-KITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELL 358 (758)
Q Consensus 281 ~~~~~~~~~~~~S~Dg~~l~~~s~~-~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~~L~ 358 (758)
......+ .+. ..+..+++.++. .....|..+++.+...++.+.+...+ ....+...+++|++..+.++ ..+|+
T Consensus 267 ~~~~~~~-~~~--~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g--~~~l~ 341 (686)
T PRK10115 267 RRKDHEY-SLD--HYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRG--LTSLR 341 (686)
T ss_pred CCCCCEE-EEE--eCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCC--EEEEE
Confidence 3222222 222 223566666654 45578888888742237777766333 22234445788998888763 56788
Q ss_pred EEeCCC
Q 004368 359 ACPVDN 364 (758)
Q Consensus 359 ~~~~~~ 364 (758)
.++..+
T Consensus 342 ~~~~~~ 347 (686)
T PRK10115 342 QINRKT 347 (686)
T ss_pred EEcCCC
Confidence 888754
No 221
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.64 E-value=0.0046 Score=65.82 Aligned_cols=215 Identities=12% Similarity=0.111 Sum_probs=129.8
Q ss_pred CceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc---c-CcceeEEEecCC--
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---V-GVTASVEWAGNE-- 247 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~---~-~~~~~~~wspDg-- 247 (758)
.+.+++--+..++. +..-.-.+||-|.+++|+.+ | ..|+|.++ |+..-..++ . .....+.|||-|
T Consensus 117 sg~iv~sf~~~~q~--~~~Wp~~k~s~~D~y~ARvv---~---~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~ 187 (561)
T COG5354 117 SGMIVFSFNGISQP--YLGWPVLKFSIDDKYVARVV---G---SSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNH 187 (561)
T ss_pred CceeEeeccccCCc--ccccceeeeeecchhhhhhc---c---CeEEEEec-CCccccCchhhccccceeeEEecCCCCC
Confidence 34555555555432 11111468999999999885 3 46889987 555433222 2 225668999985
Q ss_pred -eEEEEEeCCCCCCceEEEEEcCCCCCC-cEEEeeecCCceeeEEEEcCCCcEEEEEecCC--------cceEEEEEeCC
Q 004368 248 -ALVYITMDEILRPDKAWLHKLEADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESK--------ITRFVFYLDVS 317 (758)
Q Consensus 248 -~l~y~~~~~~~~~~~v~~~~l~~~~~~-~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~--------~~~~l~~~d~~ 317 (758)
.|+|.+....+.+..+.+..|+..... ...++.- ..+.+.|.+.|++|.+..... +.+.||++++.
T Consensus 188 ~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~----~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~ 263 (561)
T COG5354 188 DELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKV----SGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRIT 263 (561)
T ss_pred ceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEee----cccEEEEecCCceEEEEEEEeeecccceeccceEEEEeec
Confidence 588887776777888888888744211 1112221 124578999999998765332 23789999998
Q ss_pred CCCceEEeeccccc-eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEe
Q 004368 318 KPEELRVLTPRVVG-VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYERE 396 (758)
Q Consensus 318 ~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 396 (758)
... .+......+- ..+.|+|+++.+.+++... -..+...++.+ ...-.+|++.... .-|++.+.++++..-.
T Consensus 264 e~~-i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~---pa~~s~~~lr~--Nl~~~~Pe~~rNT-~~fsp~~r~il~agF~ 336 (561)
T COG5354 264 ERS-IPVEKDLKDPVHDFTWEPLSSRFAVISGYM---PASVSVFDLRG--NLRFYFPEQKRNT-IFFSPHERYILFAGFD 336 (561)
T ss_pred ccc-cceeccccccceeeeecccCCceeEEeccc---ccceeeccccc--ceEEecCCccccc-ccccCcccEEEEecCC
Confidence 654 3333222222 3456999999999988543 23455666654 2333555554332 3566777777775555
Q ss_pred CCeeEEEEEEcC
Q 004368 397 GGLQKITTYRLP 408 (758)
Q Consensus 397 ~g~~~l~v~~l~ 408 (758)
+-...+.+++..
T Consensus 337 nl~gni~i~~~~ 348 (561)
T COG5354 337 NLQGNIEIFDPA 348 (561)
T ss_pred ccccceEEeccC
Confidence 544455566554
No 222
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.64 E-value=0.015 Score=60.68 Aligned_cols=242 Identities=12% Similarity=0.040 Sum_probs=128.4
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSN 274 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~ 274 (758)
++.|-|+++.|.| +|-.| ..|+-++.++|+......++..++...-.++..+.+.... +++.+..++..
T Consensus 29 gP~w~~~~~~L~w-~DI~~---~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~~g------~~~~~~~~~~~- 97 (307)
T COG3386 29 GPVWDPDRGALLW-VDILG---GRIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACEHG------VRLLDPDTGGK- 97 (307)
T ss_pred CccCcCCCCEEEE-EeCCC---CeEEEecCCcCceEEEECCCCcccceeecCCCeEEEEccc------cEEEeccCCce-
Confidence 6799999998855 45445 4788999988877665555544445444444333343322 44444433311
Q ss_pred cEEEeeec-C--CceeeEEEEcCCCcEEEEEecC---------CcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCC
Q 004368 275 DICLYHEK-D--DIYSLGLQASESKKFLFIASES---------KITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGN 341 (758)
Q Consensus 275 ~~~v~~~~-~--~~~~~~~~~S~Dg~~l~~~s~~---------~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~ 341 (758)
..++.+.. + ....-+....|||++- |.... ...-.||++|..+.. .+++...... -...|||||+
T Consensus 98 ~t~~~~~~~~~~~~r~ND~~v~pdG~~w-fgt~~~~~~~~~~~~~~G~lyr~~p~g~~-~~l~~~~~~~~NGla~SpDg~ 175 (307)
T COG3386 98 ITLLAEPEDGLPLNRPNDGVVDPDGRIW-FGDMGYFDLGKSEERPTGSLYRVDPDGGV-VRLLDDDLTIPNGLAFSPDGK 175 (307)
T ss_pred eEEeccccCCCCcCCCCceeEcCCCCEE-EeCCCccccCccccCCcceEEEEcCCCCE-EEeecCcEEecCceEECCCCC
Confidence 12222211 1 1111245578898764 44333 122479999985543 4443331111 1224999999
Q ss_pred EEEEEEcCCCCCCcEEEEEeCCC---C-Ccce-eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcccc
Q 004368 342 HFFITRRSDELFNSELLACPVDN---T-SETT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKS 416 (758)
Q Consensus 342 ~l~~~s~~~~~~~~~L~~~~~~~---~-~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~ 416 (758)
.+|+.-.. ..+|++++++. . ...+ .+.-..+.....++..+.+..+.+....+-..+.+++.+ |+.+
T Consensus 176 tly~aDT~----~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd--G~l~-- 247 (307)
T COG3386 176 TLYVADTP----ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD--GKLL-- 247 (307)
T ss_pred EEEEEeCC----CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC--CcEE--
Confidence 88887443 46899988752 1 1111 232222344567888888766554333332456677655 6643
Q ss_pred ccCCceeeccCcccccCCCCccc---CCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 417 LQGGKSVEFIDPVYSIDPSESVF---SSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 417 l~~~~~i~~p~~~~~i~~~~~~~---d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
..+.+|... + .+..+ +.++++++.+....+ ....-+..+|.
T Consensus 248 ----~~i~lP~~~--~--t~~~FgG~~~~~L~iTs~~~~~~-~~~~~~~~~G~ 291 (307)
T COG3386 248 ----GEIKLPVKR--P--TNPAFGGPDLNTLYITSARSGMS-RMLTADPLGGG 291 (307)
T ss_pred ----EEEECCCCC--C--ccceEeCCCcCEEEEEecCCCCC-ccccccccCce
Confidence 456666321 1 12223 357887777666555 33223333444
No 223
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=97.63 E-value=0.0011 Score=66.06 Aligned_cols=197 Identities=15% Similarity=0.180 Sum_probs=103.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc-c---------cCcceeEEEecCC-eEEEEEeCCCCCCc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-L---------VGVTASVEWAGNE-ALVYITMDEILRPD 261 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~---------~~~~~~~~wspDg-~l~y~~~~~~~~~~ 261 (758)
+....+||||++|+-. +-..-|-|||..+|+.+.+- . +...-.+.||.|+ .++-.+.|. .-
T Consensus 216 ~EcA~FSPDgqyLvsg-----SvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDG---kI 287 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSG-----SVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDG---KI 287 (508)
T ss_pred hhheeeCCCCceEeec-----cccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCC---cE
Confidence 4566899999999843 33346889999999887431 1 1223446788887 443322222 23
Q ss_pred eEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-eeEEeecC
Q 004368 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRG 340 (758)
Q Consensus 262 ~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg 340 (758)
+||+ +.+++ =..-|+.....-...+++|.|+..|+-.+.+.. +.+--+.+|+-++.+.....-+ +..+++||
T Consensus 288 KvWr--i~tG~--ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~t---vRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG 360 (508)
T KOG0275|consen 288 KVWR--IETGQ--CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQT---VRIHGLKSGKCLKEFRGHSSYVNEATFTDDG 360 (508)
T ss_pred EEEE--Eecch--HHHHhhhhhccCeeEEEEccCcchhhcccccce---EEEeccccchhHHHhcCccccccceEEcCCC
Confidence 4554 55552 223344443333456789999999875444322 2333344444122222111111 22388999
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeC---CEEEEEEEeCCeeEEEEEEcCCCCCcc
Q 004368 341 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI---DHLAVYEREGGLQKITTYRLPAVGEPL 414 (758)
Q Consensus 341 ~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~l~~~~~~~g~~~l~v~~l~~~g~~~ 414 (758)
.++.-.+.++ .+-+++..+.+-....-+...+..+..+-+.. .++++.-+. +.++++++. |+-+
T Consensus 361 ~~iisaSsDg-----tvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrs---ntv~imn~q--GQvV 427 (508)
T KOG0275|consen 361 HHIISASSDG-----TVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRS---NTVYIMNMQ--GQVV 427 (508)
T ss_pred CeEEEecCCc-----cEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCC---CeEEEEecc--ceEE
Confidence 8877665543 23344444322222222333444555555543 355544333 347777776 6543
No 224
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.62 E-value=0.0092 Score=59.95 Aligned_cols=156 Identities=12% Similarity=0.159 Sum_probs=89.8
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
.+.++..||-+.... + ++..-+|++||+...+-.-. ...+ ..-.++.|.|-++.+..... .+.++++..
T Consensus 102 ~V~sL~~sP~~d~Fl--S---~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~~----~IkLyD~Rs 171 (311)
T KOG1446|consen 102 RVNSLSVSPKDDTFL--S---SSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGSE----LIKLYDLRS 171 (311)
T ss_pred eEEEEEecCCCCeEE--e---cccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCCC----eEEEEEecc
Confidence 567788888775432 2 33346899999986554332 2222 22368999984444443321 355556543
Q ss_pred CCCCcEEEe--eecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec--cccc--eeeEEeecCCEEE
Q 004368 271 DQSNDICLY--HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVVG--VDTAASHRGNHFF 344 (758)
Q Consensus 271 ~~~~~~~v~--~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~--~~~~--~~~~~s~dg~~l~ 344 (758)
-...+-..| ..++..-+-.+.+|||||+|+++.+. +.++++|.=+|.....+.. .... ....++|||+.++
T Consensus 172 ~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~---s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl 248 (311)
T KOG1446|consen 172 FDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNA---SFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVL 248 (311)
T ss_pred cCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCC---CcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEE
Confidence 322233333 22222223478899999999997653 4589999877761111211 1111 3455899999655
Q ss_pred EEEcCCCCCCcEEEEEeCCCC
Q 004368 345 ITRRSDELFNSELLACPVDNT 365 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~ 365 (758)
..++ +++|..++++++
T Consensus 249 ~gs~-----dg~i~vw~~~tg 264 (311)
T KOG1446|consen 249 SGSD-----DGTIHVWNLETG 264 (311)
T ss_pred EecC-----CCcEEEEEcCCC
Confidence 4333 256888888663
No 225
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.62 E-value=0.013 Score=57.75 Aligned_cols=156 Identities=15% Similarity=0.174 Sum_probs=89.0
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCc---ceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---TASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~---~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
.++.+++|||.|++||-.+- ..+.-|+.-..++..-. ++++- .-.++||++|.++.+...+ ..||+.
T Consensus 62 rsVRsvAwsp~g~~La~aSF-----D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD----KSVWiW 132 (312)
T KOG0645|consen 62 RSVRSVAWSPHGRYLASASF-----DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD----KSVWIW 132 (312)
T ss_pred heeeeeeecCCCcEEEEeec-----cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC----CeEEEE
Confidence 57899999999999986543 34555665555655433 45543 4458999999544444322 259998
Q ss_pred EcCCCCCCc-EEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe---eccccceee-EEeecCC
Q 004368 267 KLEADQSND-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL---TPRVVGVDT-AASHRGN 341 (758)
Q Consensus 267 ~l~~~~~~~-~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l---~~~~~~~~~-~~s~dg~ 341 (758)
.+..+.+-+ .-++++.... .-.+.|.|--. |+++.+-.++-.+|.-+. +.. +..+ ..+...+.. .|++.|.
T Consensus 133 e~deddEfec~aVL~~HtqD-VK~V~WHPt~d-lL~S~SYDnTIk~~~~~~-ddd-W~c~~tl~g~~~TVW~~~F~~~G~ 208 (312)
T KOG0645|consen 133 EIDEDDEFECIAVLQEHTQD-VKHVIWHPTED-LLFSCSYDNTIKVYRDED-DDD-WECVQTLDGHENTVWSLAFDNIGS 208 (312)
T ss_pred EecCCCcEEEEeeecccccc-ccEEEEcCCcc-eeEEeccCCeEEEEeecC-CCC-eeEEEEecCccceEEEEEecCCCc
Confidence 887543211 1233332221 11456888543 455555555556665544 333 4333 222222222 3788888
Q ss_pred EEEEEEcCCCCCCcEEEE--EeC
Q 004368 342 HFFITRRSDELFNSELLA--CPV 362 (758)
Q Consensus 342 ~l~~~s~~~~~~~~~L~~--~~~ 362 (758)
++.-.+++. +.+|++ +++
T Consensus 209 rl~s~sdD~---tv~Iw~~~~~~ 228 (312)
T KOG0645|consen 209 RLVSCSDDG---TVSIWRLYTDL 228 (312)
T ss_pred eEEEecCCc---ceEeeeeccCc
Confidence 887776654 467777 454
No 226
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.61 E-value=9.5e-05 Score=85.05 Aligned_cols=130 Identities=17% Similarity=0.194 Sum_probs=83.0
Q ss_pred CCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCC-CCC--ChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccc
Q 004368 493 ASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICND-PAF--NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKF 569 (758)
Q Consensus 493 s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~~~--~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~ 569 (758)
+.|- +.+-++.|+.. ...+ .|++|++|||.-.... ..| ......+..+..+|+.++||-| -+| |...+..
T Consensus 93 sEDC--LylNV~tp~~~-~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG-~lG--F~st~d~ 165 (545)
T KOG1516|consen 93 SEDC--LYLNVYTPQGC-SESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLG-PLG--FLSTGDS 165 (545)
T ss_pred cCCC--ceEEEeccCCC-ccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccce-ece--eeecCCC
Confidence 4454 44445556554 2213 8999999998332222 222 2223455567899999999964 122 2111111
Q ss_pred c-CCcChHhHHHHHHHHHHHc---CCCCCCcEEEEEeChhHHHHHHHHhh--CCCceeEEEEcCCc
Q 004368 570 L-KKKNTFTDFIACAEYLIKN---CYCTKEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPF 629 (758)
Q Consensus 570 ~-~~~~~~~D~~~~~~~l~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~~~ 629 (758)
. .+-..+.|.+.|++|+.++ -..||++|.++|+|+||..+..++.- ...+|+.+|..+|.
T Consensus 166 ~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 166 AAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 1 2334567999999999665 33699999999999999988766653 12588888888774
No 227
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=97.60 E-value=0.025 Score=60.34 Aligned_cols=257 Identities=14% Similarity=0.110 Sum_probs=134.7
Q ss_pred ccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee-----ec-ccc-CcceeEEEecCC-eEEEEE
Q 004368 182 NVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GK-PLV-GVTASVEWAGNE-ALVYIT 253 (758)
Q Consensus 182 n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-----~~-~~~-~~~~~~~wspDg-~l~y~~ 253 (758)
+++.-.++.-.+....+-|.|-+++ .|+-.|+++.||+.+-... .+ +-+ ..+.++.||+.| .|+.++
T Consensus 159 hEi~l~hgtk~Vsal~~Dp~GaR~~-----sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs 233 (641)
T KOG0772|consen 159 HEIQLKHGTKIVSALAVDPSGARFV-----SGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS 233 (641)
T ss_pred ceEeccCCceEEEEeeecCCCceee-----eccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe
Confidence 4444457788899999999999987 5666799999999874321 11 222 236679999999 877766
Q ss_pred eCCCCCCceEEEEEcCCCCCCcEEEeeec------------CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCc
Q 004368 254 MDEILRPDKAWLHKLEADQSNDICLYHEK------------DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEE 321 (758)
Q Consensus 254 ~~~~~~~~~v~~~~l~~~~~~~~~v~~~~------------~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~ 321 (758)
.... ..+.+-.+- ...-+-.. .-.......|.|+.+-.++++...++-+||-++-....
T Consensus 234 g~aq-----akl~DRdG~---~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q- 304 (641)
T KOG0772|consen 234 GSAQ-----AKLLDRDGF---EIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ- 304 (641)
T ss_pred cCcc-----eeEEccCCc---eeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh-
Confidence 4321 111121111 01111110 00111234699999999999888888888866544333
Q ss_pred eEEeeccccc------eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcc-eeee--cCCCCceeeeEEEeCCEEEE
Q 004368 322 LRVLTPRVVG------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSET-TVLI--PHRESVKLQDIQLFIDHLAV 392 (758)
Q Consensus 322 ~~~l~~~~~~------~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~-~~l~--~~~~~~~~~~~~~~~~~l~~ 392 (758)
.+.+.++..+ ....|++||++|+-.... +.|-.++..+.... ...+ .+.....+..+.+.-+.-++
T Consensus 305 ~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~D-----GSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~L 379 (641)
T KOG0772|consen 305 LQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLD-----GSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYL 379 (641)
T ss_pred eeEEeeccCCCcccCceeeecCCCcchhhhcccC-----CceeeeecCCcccccceEeeeccCCCCceeEEEeccccchh
Confidence 4444433222 234599999985543332 33444443221111 1112 12332234444444333333
Q ss_pred EEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCC---CCCEEEEEECCCC
Q 004368 393 YEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLR---TPPSVYDYDMDMG 465 (758)
Q Consensus 393 ~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~---~P~~i~~~d~~~~ 465 (758)
..+ .....+.+|+|..-.+.+.. ...++.+ +.-....++++.. ++++-+|.. +++.++-||..+-
T Consensus 380 lSR-g~D~tLKvWDLrq~kkpL~~-----~tgL~t~-~~~tdc~FSPd~k-li~TGtS~~~~~~~g~L~f~d~~t~ 447 (641)
T KOG0772|consen 380 LSR-GFDDTLKVWDLRQFKKPLNV-----RTGLPTP-FPGTDCCFSPDDK-LILTGTSAPNGMTAGTLFFFDRMTL 447 (641)
T ss_pred hhc-cCCCceeeeeccccccchhh-----hcCCCcc-CCCCccccCCCce-EEEecccccCCCCCceEEEEeccce
Confidence 333 33345889999854333211 1112111 1112233456654 445554432 4667888876543
No 228
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.60 E-value=0.01 Score=64.25 Aligned_cols=175 Identities=17% Similarity=0.177 Sum_probs=91.1
Q ss_pred EEEEEECCCCceeec-cccC-cceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCC
Q 004368 218 TVYVIDIETGTPVGK-PLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES 295 (758)
Q Consensus 218 ~l~v~dl~~g~~~~~-~~~~-~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~D 295 (758)
.|.|+|.++.+.+.. ...+ ....+.++|||+.+|+...+ ..|-.+++.+.+. +-+-.-.....++++|+|
T Consensus 17 ~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rd----g~vsviD~~~~~~----v~~i~~G~~~~~i~~s~D 88 (369)
T PF02239_consen 17 SVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRD----GTVSVIDLATGKV----VATIKVGGNPRGIAVSPD 88 (369)
T ss_dssp EEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETT----SEEEEEETTSSSE----EEEEE-SSEEEEEEE--T
T ss_pred EEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCC----CeEEEEECCcccE----EEEEecCCCcceEEEcCC
Confidence 799999999887753 2222 24557899999666776532 2588889887732 222122223346889999
Q ss_pred CcEEEEEecCCcceEEEEEeCCCCCceEEeeccc-c------ceee-EEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004368 296 KKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-V------GVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (758)
Q Consensus 296 g~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~-~------~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~ 367 (758)
|+++++... ....+.++|.++.+..+.+.... . .... ..+|.+..+++.-.+ ..+++.+|..+...
T Consensus 89 G~~~~v~n~--~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd----~~~I~vVdy~d~~~ 162 (369)
T PF02239_consen 89 GKYVYVANY--EPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD----TGEIWVVDYSDPKN 162 (369)
T ss_dssp TTEEEEEEE--ETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT----TTEEEEEETTTSSC
T ss_pred CCEEEEEec--CCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc----CCeEEEEEeccccc
Confidence 999977543 33467889988876233332111 0 1111 245666654444333 35889998765322
Q ss_pred ce-eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 368 TT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 368 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
.. ..+.. ...+.+..++.+.-++....++...+.+++..
T Consensus 163 ~~~~~i~~--g~~~~D~~~dpdgry~~va~~~sn~i~viD~~ 202 (369)
T PF02239_consen 163 LKVTTIKV--GRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK 202 (369)
T ss_dssp EEEEEEE----TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred cceeeecc--cccccccccCcccceeeecccccceeEEEeec
Confidence 11 12222 22455666666533333334455577777765
No 229
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.59 E-value=0.013 Score=58.72 Aligned_cols=186 Identities=17% Similarity=0.183 Sum_probs=98.5
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
..+||+-|.+||.+... | .|.|+|+.|-.+-. .+.. ...+++||+||+++.++..+ ..+.++++-.+
T Consensus 28 ~~~Fs~~G~~lAvGc~n-G----~vvI~D~~T~~iar-~lsaH~~pi~sl~WS~dgr~LltsS~D----~si~lwDl~~g 97 (405)
T KOG1273|consen 28 CCQFSRWGDYLAVGCAN-G----RVVIYDFDTFRIAR-MLSAHVRPITSLCWSRDGRKLLTSSRD----WSIKLWDLLKG 97 (405)
T ss_pred eEEeccCcceeeeeccC-C----cEEEEEccccchhh-hhhccccceeEEEecCCCCEeeeecCC----ceeEEEeccCC
Confidence 56999999999988763 3 58899998865433 2221 15679999999555554322 24667777665
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce---ee---EEeecCCEEEE
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---DT---AASHRGNHFFI 345 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~---~~---~~s~dg~~l~~ 345 (758)
..-....|. .+- ....|.|-.+-.++..--... -+++++..+. .+.|....++. .. .+++.|++++.
T Consensus 98 s~l~rirf~--spv--~~~q~hp~k~n~~va~~~~~s--p~vi~~s~~~-h~~Lp~d~d~dln~sas~~~fdr~g~yIit 170 (405)
T KOG1273|consen 98 SPLKRIRFD--SPV--WGAQWHPRKRNKCVATIMEES--PVVIDFSDPK-HSVLPKDDDGDLNSSASHGVFDRRGKYIIT 170 (405)
T ss_pred CceeEEEcc--Ccc--ceeeeccccCCeEEEEEecCC--cEEEEecCCc-eeeccCCCccccccccccccccCCCCEEEE
Confidence 322222232 222 245577644433333221111 3667776654 44443333321 11 26777887765
Q ss_pred EEcCCCCCCcEEEEEeCCCCCccee--eecCCCCceeee--EEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 346 TRRSDELFNSELLACPVDNTSETTV--LIPHRESVKLQD--IQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~~~~~~~--l~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
-+.+ ++|..++.++.....+ ++... .+.. ++..++.+++...+. .++.|++.
T Consensus 171 GtsK-----Gkllv~~a~t~e~vas~rits~~---~IK~I~~s~~g~~liiNtsDR---vIR~ye~~ 226 (405)
T KOG1273|consen 171 GTSK-----GKLLVYDAETLECVASFRITSVQ---AIKQIIVSRKGRFLIINTSDR---VIRTYEIS 226 (405)
T ss_pred ecCc-----ceEEEEecchheeeeeeeechhe---eeeEEEEeccCcEEEEecCCc---eEEEEehh
Confidence 4433 5677777665322222 22211 2233 334455565554432 35666553
No 230
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.58 E-value=0.035 Score=66.96 Aligned_cols=193 Identities=11% Similarity=0.100 Sum_probs=104.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCc----ee-----eccccCcceeEEEecCC-eEEEEEeCCCCCCc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT----PV-----GKPLVGVTASVEWAGNE-ALVYITMDEILRPD 261 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~----~~-----~~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~ 261 (758)
.+..+.|+|||++||-+.. ...|+|||+.+.. .. ..........+.|++.. .++.+...+ .
T Consensus 485 ~V~~i~fs~dg~~latgg~-----D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~D----g 555 (793)
T PLN00181 485 LVCAIGFDRDGEFFATAGV-----NKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFE----G 555 (793)
T ss_pred cEEEEEECCCCCEEEEEeC-----CCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCC----C
Confidence 4677899999999885432 3468999975421 10 00111224568998864 444444322 2
Q ss_pred eEEEEEcCCCCCCcEEEeeecCCceeeEEEEcC-CCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEE-ee
Q 004368 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAA-SH 338 (758)
Q Consensus 262 ~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~-Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~-s~ 338 (758)
.|.++++.++ +....+.... ....++.|+| |+..|+..+.+ ..|.++|+.++.....+... ..+. ..| ++
T Consensus 556 ~v~lWd~~~~--~~~~~~~~H~-~~V~~l~~~p~~~~~L~Sgs~D---g~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~ 628 (793)
T PLN00181 556 VVQVWDVARS--QLVTEMKEHE-KRVWSIDYSSADPTLLASGSDD---GSVKLWSINQGVSIGTIKTK-ANICCVQFPSE 628 (793)
T ss_pred eEEEEECCCC--eEEEEecCCC-CCEEEEEEcCCCCCEEEEEcCC---CEEEEEECCCCcEEEEEecC-CCeEEEEEeCC
Confidence 4777788765 2333343332 3344788986 67766544332 34677787765522233222 2222 235 34
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCCCCcce-eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDNTSETT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
+|..|+..+. + +.|..+|+....... .+..+. ..+..+.+.....+++...++. +.+|++..
T Consensus 629 ~g~~latgs~-d----g~I~iwD~~~~~~~~~~~~~h~--~~V~~v~f~~~~~lvs~s~D~~--ikiWd~~~ 691 (793)
T PLN00181 629 SGRSLAFGSA-D----HKVYYYDLRNPKLPLCTMIGHS--KTVSYVRFVDSSTLVSSSTDNT--LKLWDLSM 691 (793)
T ss_pred CCCEEEEEeC-C----CeEEEEECCCCCccceEecCCC--CCEEEEEEeCCCEEEEEECCCE--EEEEeCCC
Confidence 5665554432 2 467888876532111 133332 2345566655455556666664 77888763
No 231
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.55 E-value=0.0003 Score=78.37 Aligned_cols=115 Identities=23% Similarity=0.208 Sum_probs=70.3
Q ss_pred CCEEEEecCCCccCCC-CCCChHHHHHHHc-CcEEEEEecCCCCCCc---hhHHhcccccCCcChHhHHHHHHHHHHHcC
Q 004368 516 DPLLLYGYGSYEICND-PAFNSSRLSLLDR-GFIFAIAQIRGGGELG---RQWYENGKFLKKKNTFTDFIACAEYLIKNC 590 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~-~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G---~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~ 590 (758)
.|++|++-| -+.... .........|+++ |-.+++...|-=|++- ..-.+.-+...-.+.+.|+..-++++..+-
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 799998854 222111 0011233456654 9999999999655431 111111223344578899999999988653
Q ss_pred -CCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccc
Q 004368 591 -YCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVD 631 (758)
Q Consensus 591 -~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d 631 (758)
..+..++.++|+||||.|++++-.++|++|.|+++.++.+.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 34557999999999999999999999999999999887655
No 232
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.54 E-value=0.017 Score=56.59 Aligned_cols=226 Identities=12% Similarity=0.087 Sum_probs=114.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
++....|+|-..-+.++.. | .-.|.+||..+++.... ...+....+.||||| ++++...++ .|-..+..
T Consensus 66 svdql~w~~~~~d~~atas--~--dk~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD-----~it~id~r 136 (313)
T KOG1407|consen 66 SVDQLCWDPKHPDLFATAS--G--DKTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDD-----RITFIDAR 136 (313)
T ss_pred chhhheeCCCCCcceEEec--C--CceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcc-----cEEEEEec
Confidence 5566778877666555544 2 24799999999887653 222223447999999 777765443 25454544
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEEEc
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRR 348 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 348 (758)
+- ..+-++.-.-+...+.|.-++.. +|..+.-+.-+|.-++. -++.+-+..+..+... .++|+|++|+.-+.
T Consensus 137 ~~----~~~~~~~~~~e~ne~~w~~~nd~-Fflt~GlG~v~ILsyps--Lkpv~si~AH~snCicI~f~p~GryfA~GsA 209 (313)
T KOG1407|consen 137 TY----KIVNEEQFKFEVNEISWNNSNDL-FFLTNGLGCVEILSYPS--LKPVQSIKAHPSNCICIEFDPDGRYFATGSA 209 (313)
T ss_pred cc----ceeehhcccceeeeeeecCCCCE-EEEecCCceEEEEeccc--cccccccccCCcceEEEEECCCCceEeeccc
Confidence 32 12222222223335677766554 55555545555555542 2223444445444443 39999998776544
Q ss_pred CCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCc
Q 004368 349 SDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDP 428 (758)
Q Consensus 349 ~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~ 428 (758)
+ .-+-..|++..--.+.+...+..+.-.+|+-++..|+ ..+++-. |.|-...+ |..+ .+|.-..+
T Consensus 210 D-----AlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lA-SaSEDh~--IDIA~vet-Gd~~------~eI~~~~~ 274 (313)
T KOG1407|consen 210 D-----ALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLA-SASEDHF--IDIAEVET-GDRV------WEIPCEGP 274 (313)
T ss_pred c-----ceeeccChhHhhhheeeccccCceEEEEeccCcceee-ccCccce--EEeEeccc-CCeE------EEeeccCC
Confidence 3 2344456543211222333333333334444444443 3333332 33444442 4422 23332222
Q ss_pred ccccCCCCcccCCcEEEEEEecC
Q 004368 429 VYSIDPSESVFSSRILRFHYSSL 451 (758)
Q Consensus 429 ~~~i~~~~~~~d~~~l~~~~sS~ 451 (758)
.++ +.+.+...-+.|..+..
T Consensus 275 t~t---VAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 275 TFT---VAWHPKRPLLAYACDDK 294 (313)
T ss_pred cee---EEecCCCceeeEEecCC
Confidence 222 45666666666655443
No 233
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=97.52 E-value=0.00025 Score=57.86 Aligned_cols=77 Identities=17% Similarity=0.185 Sum_probs=51.5
Q ss_pred CeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcCh
Q 004368 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNT 575 (758)
Q Consensus 496 G~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~ 575 (758)
|.+|......|++ .+..+|+++||-...+. .|...+..|+++||.|+..|.||+|.+.. . ....+.
T Consensus 1 G~~L~~~~w~p~~-----~~k~~v~i~HG~~eh~~--ry~~~a~~L~~~G~~V~~~D~rGhG~S~g------~-rg~~~~ 66 (79)
T PF12146_consen 1 GTKLFYRRWKPEN-----PPKAVVVIVHGFGEHSG--RYAHLAEFLAEQGYAVFAYDHRGHGRSEG------K-RGHIDS 66 (79)
T ss_pred CcEEEEEEecCCC-----CCCEEEEEeCCcHHHHH--HHHHHHHHHHhCCCEEEEECCCcCCCCCC------c-ccccCC
Confidence 4566666544442 25789999999533222 47778889999999999999999998752 1 112345
Q ss_pred HhHHHHHHHHH
Q 004368 576 FTDFIACAEYL 586 (758)
Q Consensus 576 ~~D~~~~~~~l 586 (758)
++++++-+..+
T Consensus 67 ~~~~v~D~~~~ 77 (79)
T PF12146_consen 67 FDDYVDDLHQF 77 (79)
T ss_pred HHHHHHHHHHH
Confidence 66666555443
No 234
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.47 E-value=0.033 Score=54.89 Aligned_cols=153 Identities=15% Similarity=0.150 Sum_probs=84.6
Q ss_pred EEeeEEECCC-CCEEEEEEeCCCCeEEEEEEEECCCCceee--cccc----CcceeEEEecCC-eEEEEEeCCCCCCceE
Q 004368 192 SVGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVG--KPLV----GVTASVEWAGNE-ALVYITMDEILRPDKA 263 (758)
Q Consensus 192 ~i~~~~~SPD-G~~lAy~~~~~G~e~~~l~v~dl~~g~~~~--~~~~----~~~~~~~wspDg-~l~y~~~~~~~~~~~v 263 (758)
.+-.++|+|- |..|| .++....|+|+++.++.... ..+. ..+.+++|||.| .++-.++|.. +
T Consensus 16 r~W~~awhp~~g~ilA-----scg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t-----~ 85 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILA-----SCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT-----V 85 (312)
T ss_pred cEEEEEeccCCceEEE-----eecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce-----E
Confidence 4678899998 88665 23334679999987543321 1222 236679999999 5555555543 2
Q ss_pred EEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCC-C--ceEEeeccccceeeE-Eeec
Q 004368 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP-E--ELRVLTPRVVGVDTA-ASHR 339 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~-~--~~~~l~~~~~~~~~~-~s~d 339 (758)
.+..-..+.=+-+..+++.... .-.++||++|.+|+-.+-+ ..||+...+.. + -...|.++..++.-. |.|.
T Consensus 86 ~Iw~k~~~efecv~~lEGHEnE-VK~Vaws~sG~~LATCSRD---KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt 161 (312)
T KOG0645|consen 86 VIWKKEDGEFECVATLEGHENE-VKCVAWSASGNYLATCSRD---KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT 161 (312)
T ss_pred EEeecCCCceeEEeeeeccccc-eeEEEEcCCCCEEEEeeCC---CeEEEEEecCCCcEEEEeeeccccccccEEEEcCC
Confidence 2222122211122233433322 2368899999999865433 23566555433 2 233455665555443 6665
Q ss_pred CCEEEEEEcCCCCCCcEEEEEe
Q 004368 340 GNHFFITRRSDELFNSELLACP 361 (758)
Q Consensus 340 g~~l~~~s~~~~~~~~~L~~~~ 361 (758)
.+ |+|....+ ..-++|+-+
T Consensus 162 ~d-lL~S~SYD--nTIk~~~~~ 180 (312)
T KOG0645|consen 162 ED-LLFSCSYD--NTIKVYRDE 180 (312)
T ss_pred cc-eeEEeccC--CeEEEEeec
Confidence 44 55555544 145677654
No 235
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.43 E-value=0.026 Score=56.76 Aligned_cols=208 Identities=15% Similarity=0.103 Sum_probs=106.1
Q ss_pred eecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee-----ecccc-CcceeEEEecCC-eEEE
Q 004368 179 LDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GKPLV-GVTASVEWAGNE-ALVY 251 (758)
Q Consensus 179 lD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-----~~~~~-~~~~~~~wspDg-~l~y 251 (758)
||.+.+.. |+ -.+..+.||-|||+||-..+ ...|++|+++.=+.. +..++ +....++|+||- .+++
T Consensus 77 l~~~~LKg-H~-~~vt~~~FsSdGK~lat~~~-----Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv 149 (420)
T KOG2096|consen 77 LNVSVLKG-HK-KEVTDVAFSSDGKKLATISG-----DRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVV 149 (420)
T ss_pred hhhhhhhc-cC-CceeeeEEcCCCceeEEEeC-----CceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEE
Confidence 46676653 42 35778899999999986654 246888888752211 11122 134568999998 6655
Q ss_pred EEeCCCCCCceEEEEEcCCCC--C-------CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCce
Q 004368 252 ITMDEILRPDKAWLHKLEADQ--S-------NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 322 (758)
Q Consensus 252 ~~~~~~~~~~~v~~~~l~~~~--~-------~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~ 322 (758)
.... ...|+.+.+.... . .|-+-|++......+++.....+++|+-.+. ...|.++++.+.. +
T Consensus 150 ~~~~----g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~---dt~i~lw~lkGq~-L 221 (420)
T KOG2096|consen 150 SVKR----GNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASL---DTKICLWDLKGQL-L 221 (420)
T ss_pred EEcc----CCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecC---CCcEEEEecCCce-e
Confidence 5432 2346555543211 0 1222233333323344555555666543322 2457888888543 4
Q ss_pred EEeecc-ccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcce---e---eecCCCCceeeeEEEeCC-EEEEEE
Q 004368 323 RVLTPR-VVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT---V---LIPHRESVKLQDIQLFID-HLAVYE 394 (758)
Q Consensus 323 ~~l~~~-~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~---~---l~~~~~~~~~~~~~~~~~-~l~~~~ 394 (758)
.-+-.. ..+....+||+|+.++...- .+..+++-.=....+..+ . +-.+.. .+..+.+.++ .-.++.
T Consensus 222 ~~idtnq~~n~~aavSP~GRFia~~gF---TpDVkVwE~~f~kdG~fqev~rvf~LkGH~s--aV~~~aFsn~S~r~vtv 296 (420)
T KOG2096|consen 222 QSIDTNQSSNYDAAVSPDGRFIAVSGF---TPDVKVWEPIFTKDGTFQEVKRVFSLKGHQS--AVLAAAFSNSSTRAVTV 296 (420)
T ss_pred eeeccccccccceeeCCCCcEEEEecC---CCCceEEEEEeccCcchhhhhhhheeccchh--heeeeeeCCCcceeEEE
Confidence 433322 23344569999996655432 233444432211111111 1 222222 2334444443 334567
Q ss_pred EeCCeeEEEEEEcC
Q 004368 395 REGGLQKITTYRLP 408 (758)
Q Consensus 395 ~~~g~~~l~v~~l~ 408 (758)
+.+|. +++|+.+
T Consensus 297 SkDG~--wriwdtd 308 (420)
T KOG2096|consen 297 SKDGK--WRIWDTD 308 (420)
T ss_pred ecCCc--EEEeecc
Confidence 77886 4566655
No 236
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=97.42 E-value=0.041 Score=56.45 Aligned_cols=119 Identities=16% Similarity=0.236 Sum_probs=78.8
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec---cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
++....||.||.+|| .|+-...|.|+...+|..... +..+... +.|.|-+.|++....++ .||.+.+
T Consensus 108 SVt~~~FshdgtlLA-----TGdmsG~v~v~~~stg~~~~~~~~e~~dieW-l~WHp~a~illAG~~DG----svWmw~i 177 (399)
T KOG0296|consen 108 SVTCCSFSHDGTLLA-----TGDMSGKVLVFKVSTGGEQWKLDQEVEDIEW-LKWHPRAHILLAGSTDG----SVWMWQI 177 (399)
T ss_pred ceEEEEEccCceEEE-----ecCCCccEEEEEcccCceEEEeecccCceEE-EEecccccEEEeecCCC----cEEEEEC
Confidence 678889999999998 344455799999999887642 2223334 68889775554443332 4999999
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEee
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT 326 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~ 326 (758)
... ....++......... -.++||||.|+....+ .-|.++++.++.+...+.
T Consensus 178 p~~--~~~kv~~Gh~~~ct~-G~f~pdGKr~~tgy~d---gti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 178 PSQ--ALCKVMSGHNSPCTC-GEFIPDGKRILTGYDD---GTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred CCc--ceeeEecCCCCCccc-ccccCCCceEEEEecC---ceEEEEecCCCceeEEec
Confidence 875 355677665544332 3589999998765442 336667787776333443
No 237
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=97.38 E-value=0.0056 Score=66.26 Aligned_cols=202 Identities=13% Similarity=0.141 Sum_probs=114.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC--eEEEEEeCCCCCCceEEEEE-
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE--ALVYITMDEILRPDKAWLHK- 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg--~l~y~~~~~~~~~~~v~~~~- 267 (758)
.+..+++.|-|.+|| .|++..+++||.+.||.-+.. .+.+.+..++|+|.+ .++.++.... +++.+
T Consensus 402 ~Vr~iSvdp~G~wla-----sGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~-----~~ivnp 471 (733)
T KOG0650|consen 402 LVRSISVDPSGEWLA-----SGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGEC-----VLIVNP 471 (733)
T ss_pred eEEEEEecCCcceee-----ecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCc-----eEEeCc
Confidence 466789999999998 455567899999999986654 566677889999998 4555544321 11111
Q ss_pred -cC-------------CC---CCC--cEEEeeec--------------CCceeeEEEEcCCCcEEEEEecCCcceEEEEE
Q 004368 268 -LE-------------AD---QSN--DICLYHEK--------------DDIYSLGLQASESKKFLFIASESKITRFVFYL 314 (758)
Q Consensus 268 -l~-------------~~---~~~--~~~v~~~~--------------~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~ 314 (758)
+| +. ... .+..+... .+.-.-.+.|..+|.||+....+..+..|++.
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliH 551 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIH 551 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEE
Confidence 00 00 000 00011100 01111257899999999988888888889999
Q ss_pred eCCCCCceEEeeccccceeeE-EeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEE
Q 004368 315 DVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVY 393 (758)
Q Consensus 315 d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 393 (758)
.+.......++.....-+... |.|..-+|++.|... |..+|+........+.+...-...-++++.||.|++.
T Consensus 552 QLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~------vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnli~g 625 (733)
T KOG0650|consen 552 QLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRS------VRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNLILG 625 (733)
T ss_pred ecccccccCchhhcCCceeEEEecCCCceEEEEeccc------eEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeEEEe
Confidence 887654112222222223333 666555566655443 4445654311112233332222222344556888766
Q ss_pred EEeCCeeEEEEEEcCCCCC
Q 004368 394 EREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 394 ~~~~g~~~l~v~~l~~~g~ 412 (758)
... .++..++++.+.+
T Consensus 626 s~d---~k~~WfDldlssk 641 (733)
T KOG0650|consen 626 SYD---KKMCWFDLDLSSK 641 (733)
T ss_pred cCC---CeeEEEEcccCcc
Confidence 543 3477788887544
No 238
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.36 E-value=0.02 Score=61.00 Aligned_cols=154 Identities=18% Similarity=0.141 Sum_probs=101.2
Q ss_pred HHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcC-CccchhhccC------CCCCCCChhhhhccCCC--
Q 004368 584 EYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAV-PFVDVLTTML------DPTIPLTTAEWEEWGDP-- 654 (758)
Q Consensus 584 ~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~-~~~d~~~~~~------~~~~~~~~~~~~e~g~p-- 654 (758)
+++.++...+.++.+|.|.|==|..+..+++ ...+++|++..+ +++|+...+. ....+.....|-.-|-.
T Consensus 161 ~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~ 239 (367)
T PF10142_consen 161 EFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQ 239 (367)
T ss_pred HHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhh
Confidence 3445555678899999999999998887777 456777776554 3344332210 00112222222222322
Q ss_pred -CCHHHHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHH
Q 004368 655 -WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERL 733 (758)
Q Consensus 655 -~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~ 733 (758)
..++..+.+.-.+|+...++...| -||+.|.+|+...+..+.-|+..|...+ .++..++.+|.... ....
T Consensus 240 l~tp~f~~L~~ivDP~~Y~~rL~~P-K~ii~atgDeFf~pD~~~~y~d~L~G~K------~lr~vPN~~H~~~~--~~~~ 310 (367)
T PF10142_consen 240 LDTPEFDKLMQIVDPYSYRDRLTMP-KYIINATGDEFFVPDSSNFYYDKLPGEK------YLRYVPNAGHSLIG--SDVV 310 (367)
T ss_pred cCCHHHHHHHHhcCHHHHHHhcCcc-EEEEecCCCceeccCchHHHHhhCCCCe------eEEeCCCCCcccch--HHHH
Confidence 355666667778999999999998 8999999999999999999999997532 23334599997653 3333
Q ss_pred HHHHHHHHHHHHhcCCC
Q 004368 734 REAAFTYTFLMRALSML 750 (758)
Q Consensus 734 ~~~~~~~~fl~~~l~~~ 750 (758)
+. ..+|+...+...
T Consensus 311 ~~---l~~f~~~~~~~~ 324 (367)
T PF10142_consen 311 QS---LRAFYNRIQNGR 324 (367)
T ss_pred HH---HHHHHHHHHcCC
Confidence 33 578888766444
No 239
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.36 E-value=0.0035 Score=72.39 Aligned_cols=142 Identities=17% Similarity=0.190 Sum_probs=80.1
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC----------Ccee------ec-ccc---CcceeEEEecCCeEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET----------GTPV------GK-PLV---GVTASVEWAGNEALV 250 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~----------g~~~------~~-~~~---~~~~~~~wspDg~l~ 250 (758)
.++.-+.|||||++||.+.| ..-|.||+.+. |... .. .+. +-+..+.|+||+.++
T Consensus 70 ~sv~CVR~S~dG~~lAsGSD-----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~l 144 (942)
T KOG0973|consen 70 GSVNCVRFSPDGSYLASGSD-----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLL 144 (942)
T ss_pred CceeEEEECCCCCeEeeccC-----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEE
Confidence 46778899999999997555 45677777662 1110 00 111 124568999999544
Q ss_pred E-EEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccc
Q 004368 251 Y-ITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV 329 (758)
Q Consensus 251 y-~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~ 329 (758)
. .+.|. .|.+++..+- +...++... ....-++.|.|-|+|++-.+.++ +-.||...- -+- .+.+++..
T Consensus 145 vS~s~Dn-----sViiwn~~tF--~~~~vl~~H-~s~VKGvs~DP~Gky~ASqsdDr-tikvwrt~d-w~i-~k~It~pf 213 (942)
T KOG0973|consen 145 VSVSLDN-----SVIIWNAKTF--ELLKVLRGH-QSLVKGVSWDPIGKYFASQSDDR-TLKVWRTSD-WGI-EKSITKPF 213 (942)
T ss_pred EEecccc-----eEEEEccccc--eeeeeeecc-cccccceEECCccCeeeeecCCc-eEEEEEccc-cee-eEeeccch
Confidence 3 33333 3666665554 233344332 33445789999999988665543 345555211 111 23333322
Q ss_pred cc---e----eeEEeecCCEEEEEEc
Q 004368 330 VG---V----DTAASHRGNHFFITRR 348 (758)
Q Consensus 330 ~~---~----~~~~s~dg~~l~~~s~ 348 (758)
+. . ...|||||++|.....
T Consensus 214 ~~~~~~T~f~RlSWSPDG~~las~nA 239 (942)
T KOG0973|consen 214 EESPLTTFFLRLSWSPDGHHLASPNA 239 (942)
T ss_pred hhCCCcceeeecccCCCcCeecchhh
Confidence 21 1 1249999998875543
No 240
>PRK04940 hypothetical protein; Provisional
Probab=97.36 E-value=0.0036 Score=59.21 Aligned_cols=118 Identities=18% Similarity=0.054 Sum_probs=66.9
Q ss_pred CcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcCcccccCC
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYSPVDNVKA 674 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sp~~~i~~ 674 (758)
++++++|.|.||+.|.+++.++. . -+|+.+|.+.+-..+.. -+... .+|. -..++..+.++ +
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~-~ig~~----~~y~-~~~~~h~~eL~-------~-- 121 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENMEG-KIDRP----EEYA-DIATKCVTNFR-------E-- 121 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHHHH-HhCCC----cchh-hhhHHHHHHhh-------h--
Confidence 46999999999999999999874 3 45566776665432211 01000 0111 11233333333 1
Q ss_pred CCCC-eEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 004368 675 QNYP-HILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 744 (758)
Q Consensus 675 ~~~P-~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 744 (758)
+-| ..+++..+.|.+.++.++.+.++.. .+.++. +|+.|.+. +-...+ ..+.+|+.
T Consensus 122 -~~p~r~~vllq~gDEvLDyr~a~~~y~~~------y~~~v~---~GGdH~f~-~fe~~l---~~I~~F~~ 178 (180)
T PRK04940 122 -KNRDRCLVILSRNDEVLDSQRTAEELHPY------YEIVWD---EEQTHKFK-NISPHL---QRIKAFKT 178 (180)
T ss_pred -cCcccEEEEEeCCCcccCHHHHHHHhccC------ceEEEE---CCCCCCCC-CHHHHH---HHHHHHHh
Confidence 122 2677789999999988777665432 123334 37888653 222323 33567773
No 241
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.31 E-value=0.0057 Score=65.98 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=55.1
Q ss_pred hHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 536 SSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 536 ~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
.....|++ |+-|++.|-+--+.- ....+.-.++|.+..+...++. +-++ +-++|.|+||.+++++++.
T Consensus 121 S~V~~Ll~-g~dVYl~DW~~p~~v--------p~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa~Al 188 (406)
T TIGR01849 121 STVEALLP-DHDVYITDWVNARMV--------PLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAAVAL 188 (406)
T ss_pred HHHHHHhC-CCcEEEEeCCCCCCC--------chhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHHHHH
Confidence 34567888 999999986432211 0123445567777644433322 2345 9999999999987765554
Q ss_pred C-----CCceeEEEEcCCccch
Q 004368 616 R-----PDLFKAAVAAVPFVDV 632 (758)
Q Consensus 616 ~-----p~~f~a~v~~~~~~d~ 632 (758)
. |+..+.+++..+.+|.
T Consensus 189 ~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 189 MAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred HHhcCCCCCcceEEEEecCccC
Confidence 3 5568888888877774
No 242
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.29 E-value=0.011 Score=57.60 Aligned_cols=196 Identities=14% Similarity=0.175 Sum_probs=109.2
Q ss_pred eEEECC--CCCEEEEEE-eC---CCCeEEEEEEEECCCCceeec--c--ccCcceeEEEecCC-eEEEEEeCCCCCCceE
Q 004368 195 CFQVSP--DNKLVAYAE-DT---KGDEIYTVYVIDIETGTPVGK--P--LVGVTASVEWAGNE-ALVYITMDEILRPDKA 263 (758)
Q Consensus 195 ~~~~SP--DG~~lAy~~-~~---~G~e~~~l~v~dl~~g~~~~~--~--~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v 263 (758)
++++|| +++ ||... .. .| ...|+|.+++.++-+++ . ..+....++||+.. .++++...++ .|
T Consensus 13 svqfSPf~~nr-LavAt~q~yGl~G--~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDG----SL 85 (311)
T KOG0277|consen 13 SVQFSPFVENR-LAVATAQHYGLAG--NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDG----SL 85 (311)
T ss_pred eeEecccccch-hheeehhhccccc--CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCc----eE
Confidence 457777 444 33332 21 23 35799999974443322 1 23334459999987 5666655332 25
Q ss_pred EEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE--EeecCC
Q 004368 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGN 341 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg~ 341 (758)
.+.+++.. +.++..|.|..... .++.|.+-.++.+++++-.++-+||..+... .++..... ....|. |+|.-.
T Consensus 86 rl~d~~~~-s~Pi~~~kEH~~EV-~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~--Sv~Tf~gh-~~~Iy~a~~sp~~~ 160 (311)
T KOG0277|consen 86 RLFDLTMP-SKPIHKFKEHKREV-YSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN--SVQTFNGH-NSCIYQAAFSPHIP 160 (311)
T ss_pred EEeccCCC-CcchhHHHhhhhhe-EEeccccccceeEEeeccCCceEeecCCCCc--ceEeecCC-ccEEEEEecCCCCC
Confidence 56665544 34666777654333 3778988888888877656667788666543 24443332 233343 887655
Q ss_pred EEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 342 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 342 ~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
.++..+..+ ..+-..|+..++....+..+..+..--+++-.+..++++...++. ++.|++.
T Consensus 161 nlfas~Sgd----~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~--vr~wDir 221 (311)
T KOG0277|consen 161 NLFASASGD----GTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNL--VRGWDIR 221 (311)
T ss_pred CeEEEccCC----ceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCce--EEEEehh
Confidence 555444433 234445555544433333343233333444455677777666665 6778776
No 243
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=97.27 E-value=0.092 Score=53.96 Aligned_cols=153 Identities=16% Similarity=0.185 Sum_probs=94.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-c-ccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
++-.++++|+.+++| .|++.-.-++|++.+|+..-. + -++.+....||.||.++.+.. -.-+|.+++..
T Consensus 66 svFavsl~P~~~l~a-----TGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGd----msG~v~v~~~s 136 (399)
T KOG0296|consen 66 SVFAVSLHPNNNLVA-----TGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGD----MSGKVLVFKVS 136 (399)
T ss_pred ceEEEEeCCCCceEE-----ecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecC----CCccEEEEEcc
Confidence 566778999888776 455566789999999985432 1 123356689999997665543 22358888888
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEEEc
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRR 348 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 348 (758)
++..+ ..++.+.+. . .-+.|.|-+..|+..+.+ ..+|.+.+..+...+.+......... .+.|||++++-...
T Consensus 137 tg~~~-~~~~~e~~d-i-eWl~WHp~a~illAG~~D---GsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~ 210 (399)
T KOG0296|consen 137 TGGEQ-WKLDQEVED-I-EWLKWHPRAHILLAGSTD---GSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYD 210 (399)
T ss_pred cCceE-EEeecccCc-e-EEEEecccccEEEeecCC---CcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEec
Confidence 77432 223323222 1 135799988777765443 34677777664313333332222222 28899998876655
Q ss_pred CCCCCCcEEEEEeCCC
Q 004368 349 SDELFNSELLACPVDN 364 (758)
Q Consensus 349 ~~~~~~~~L~~~~~~~ 364 (758)
. +.|.+.++.+
T Consensus 211 d-----gti~~Wn~kt 221 (399)
T KOG0296|consen 211 D-----GTIIVWNPKT 221 (399)
T ss_pred C-----ceEEEEecCC
Confidence 3 4577777766
No 244
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.25 E-value=0.053 Score=59.42 Aligned_cols=246 Identities=13% Similarity=0.095 Sum_probs=134.8
Q ss_pred EeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cc-cCcceeEEEecCC-eEEEEEe
Q 004368 178 ILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL-VGVTASVEWAGNE-ALVYITM 254 (758)
Q Consensus 178 llD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~-~~~~~~~~wspDg-~l~y~~~ 254 (758)
+||.-.+.. + +-..-+.|| -...||.+.. ..+|+|+..+|++..+ .+ .+.+.++.|+++| .|+.-..
T Consensus 168 vLDaP~l~d--D-fY~nlldWs-s~n~laValg------~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~ 237 (484)
T KOG0305|consen 168 VLDAPGLQD--D-FYLNLLDWS-SANVLAVALG------QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTS 237 (484)
T ss_pred hccCCcccc--c-HhhhHhhcc-cCCeEEEEec------ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeec
Confidence 457555532 2 334567899 5667777663 5799999999997765 44 3446779999999 5554443
Q ss_pred CCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccc-e
Q 004368 255 DEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG-V 332 (758)
Q Consensus 255 ~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~-~ 332 (758)
+. .|.++++.... ...-+..........++|.. . ++.+..+. ..|...|+...+ ....+...... .
T Consensus 238 ~g-----~v~iwD~~~~k--~~~~~~~~h~~rvg~laW~~---~-~lssGsr~-~~I~~~dvR~~~~~~~~~~~H~qeVC 305 (484)
T KOG0305|consen 238 DG-----TVQIWDVKEQK--KTRTLRGSHASRVGSLAWNS---S-VLSSGSRD-GKILNHDVRISQHVVSTLQGHRQEVC 305 (484)
T ss_pred CC-----eEEEEehhhcc--ccccccCCcCceeEEEeccC---c-eEEEecCC-CcEEEEEEecchhhhhhhhcccceee
Confidence 32 36677765542 22223331222333566762 1 22232222 234444554433 11212222222 2
Q ss_pred eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 333 DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 333 ~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
...|++|+..++--.|+ ..++..|...+.....+..+...+..-.|++....|+.+.--.....+.+|+... |.
T Consensus 306 gLkws~d~~~lASGgnD-----N~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~-g~ 379 (484)
T KOG0305|consen 306 GLKWSPDGNQLASGGND-----NVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNT-GA 379 (484)
T ss_pred eeEECCCCCeeccCCCc-----cceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCC-Cc
Confidence 33499999977644333 4677777755444444777777776667777767776555433344677887763 33
Q ss_pred ccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEE
Q 004368 413 PLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDY 460 (758)
Q Consensus 413 ~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~ 460 (758)
. +.-.+....|.++.++...+++..++--...--+||.|
T Consensus 380 ~---------i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ 418 (484)
T KOG0305|consen 380 R---------IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKY 418 (484)
T ss_pred E---------ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEec
Confidence 2 22112222344556777777776655433332234444
No 245
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.22 E-value=0.034 Score=56.87 Aligned_cols=152 Identities=16% Similarity=0.080 Sum_probs=85.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
.+.++.+||||+.+|+.....+ ...|++....+....... ......+.|+++|.++...... ....+++ ...++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~--~~~L~~~~~~~~~~~~~~-g~~l~~PS~d~~g~~W~v~~~~--~~~~~~~-~~~~g 98 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDG--GRSLYVGPAGGPVRPVLT-GGSLTRPSWDPDGWVWTVDDGS--GGVRVVR-DSASG 98 (253)
T ss_pred cccceEECCCCCeEEEEEEcCC--CCEEEEEcCCCcceeecc-CCccccccccCCCCEEEEEcCC--CceEEEE-ecCCC
Confidence 4678899999999999983333 478999886554333322 2235668999999666554322 1122232 22222
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCC---CCC-----ceEEeecc-ccce-eeEEeecCC
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS---KPE-----ELRVLTPR-VVGV-DTAASHRGN 341 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~---~~~-----~~~~l~~~-~~~~-~~~~s~dg~ 341 (758)
......+-......-...+.+||||..+++.....+..+||+.-+. ++. .+..+... ...+ ...|.+++.
T Consensus 99 ~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~ 178 (253)
T PF10647_consen 99 TGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST 178 (253)
T ss_pred cceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE
Confidence 2222222111111123468899999999998877666788876543 221 11222211 1122 344887765
Q ss_pred EEEEEEcCC
Q 004368 342 HFFITRRSD 350 (758)
Q Consensus 342 ~l~~~s~~~ 350 (758)
|++++...
T Consensus 179 -L~V~~~~~ 186 (253)
T PF10647_consen 179 -LVVLGRSA 186 (253)
T ss_pred -EEEEeCCC
Confidence 66666554
No 246
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.22 E-value=0.049 Score=55.83 Aligned_cols=197 Identities=11% Similarity=0.087 Sum_probs=108.2
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc--cCcceeEEEecCC-eEEEEEeCCC---------C
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEI---------L 258 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~wspDg-~l~y~~~~~~---------~ 258 (758)
..+..++|.+ ..++|.+-.+. -.|+|+|-....+..+.. -.....++|-|-+ +-+-+.-..+ .
T Consensus 99 ~dlr~~aWhq--H~~~fava~nd---dvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tl 173 (445)
T KOG2139|consen 99 IDLRGVAWHQ--HIIAFAVATND---DVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTL 173 (445)
T ss_pred cceeeEeech--hhhhhhhhccC---cEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCccc
Confidence 3577888888 66677665433 467788776644433321 1225669999988 4333322211 0
Q ss_pred CCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEee-ccccceee-EE
Q 004368 259 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT-PRVVGVDT-AA 336 (758)
Q Consensus 259 ~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~-~~~~~~~~-~~ 336 (758)
...+.. +.++. ....++..+......+..|.+||..++- .+-+.+.+.+.|.+++. -.+|. .+..++.. -|
T Consensus 174 n~~r~~--~~~s~--~~~qvl~~pgh~pVtsmqwn~dgt~l~t--AS~gsssi~iWdpdtg~-~~pL~~~glgg~slLkw 246 (445)
T KOG2139|consen 174 NANRNI--RMMST--HHLQVLQDPGHNPVTSMQWNEDGTILVT--ASFGSSSIMIWDPDTGQ-KIPLIPKGLGGFSLLKW 246 (445)
T ss_pred cccccc--ccccc--cchhheeCCCCceeeEEEEcCCCCEEee--cccCcceEEEEcCCCCC-cccccccCCCceeeEEE
Confidence 001111 11111 1223444444344456789999987654 34455677788888876 44444 34455544 49
Q ss_pred eecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEe--CCEEEEEEEeCCeeEEEEEEcC
Q 004368 337 SHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 337 s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
||||++|+..+-+. .++|+...- .....+|+...+ .++...|+ +..|++.. .|.+.++-...+
T Consensus 247 SPdgd~lfaAt~da---vfrlw~e~q-~wt~erw~lgsg---rvqtacWspcGsfLLf~~--sgsp~lysl~f~ 311 (445)
T KOG2139|consen 247 SPDGDVLFAATCDA---VFRLWQENQ-SWTKERWILGSG---RVQTACWSPCGSFLLFAC--SGSPRLYSLTFD 311 (445)
T ss_pred cCCCCEEEEecccc---eeeeehhcc-cceecceeccCC---ceeeeeecCCCCEEEEEE--cCCceEEEEeec
Confidence 99999887776654 367774321 122356666554 45555555 55665554 355665544443
No 247
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.17 E-value=0.058 Score=60.59 Aligned_cols=147 Identities=14% Similarity=0.050 Sum_probs=79.8
Q ss_pred EECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEE-eCCCCCCceEEEEEcCCCCCC
Q 004368 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYIT-MDEILRPDKAWLHKLEADQSN 274 (758)
Q Consensus 197 ~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~-~~~~~~~~~v~~~~l~~~~~~ 274 (758)
=++|||+.|.-. ......+.++|.++.+.... .+++....+.++|||+.+|++ .+.. ....+-.++.+.. .
T Consensus 199 PlpnDGk~l~~~----~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE-~G~tl~em~a~e~--d 271 (635)
T PRK02888 199 PLPNDGKDLDDP----KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSE-EGVTLAEMMAAER--D 271 (635)
T ss_pred ccCCCCCEeecc----cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcc-cCcceeeeccccC--c
Confidence 468999977311 22346788899998776532 445555558999999544444 3322 2223333333221 1
Q ss_pred cEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCC----CCceEEeec-cccceeeEEeecCCEEEEEEcC
Q 004368 275 DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK----PEELRVLTP-RVVGVDTAASHRGNHFFITRRS 349 (758)
Q Consensus 275 ~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~----~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~ 349 (758)
...+|.-.. . -.+.+||++.++. .+.|-++|..+ +.......+ ...-....+||||+++|+....
T Consensus 272 ~~vvfni~~--i---ea~vkdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVankl 341 (635)
T PRK02888 272 WVVVFNIAR--I---EEAVKAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKL 341 (635)
T ss_pred eEEEEchHH--H---HHhhhCCCEEEEC-----CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCC
Confidence 222222111 0 1357899998872 45788999887 211222222 1111233489999987765433
Q ss_pred CCCCCcEEEEEeCCC
Q 004368 350 DELFNSELLACPVDN 364 (758)
Q Consensus 350 ~~~~~~~L~~~~~~~ 364 (758)
+ ..+-++|++.
T Consensus 342 S----~tVSVIDv~k 352 (635)
T PRK02888 342 S----PTVTVIDVRK 352 (635)
T ss_pred C----CcEEEEEChh
Confidence 2 3455666644
No 248
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.16 E-value=0.035 Score=56.11 Aligned_cols=55 Identities=11% Similarity=0.107 Sum_probs=34.7
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecccc-CcceeEEEecCCeE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEAL 249 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~~~~~~~wspDg~l 249 (758)
..+++..|||||+.|.-++.- ...|-||.|.+.+..-..-+ ...-+++|.|||++
T Consensus 92 agls~~~WSPdgrhiL~tseF----~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f 147 (447)
T KOG4497|consen 92 AGLSSISWSPDGRHILLTSEF----DLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQF 147 (447)
T ss_pred CcceeeeECCCcceEeeeecc----eeEEEEEEeccceeEEecccccCceeEEECCCCce
Confidence 357788999999999866543 35677777776554332211 12344677777743
No 249
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=97.12 E-value=0.036 Score=64.33 Aligned_cols=119 Identities=11% Similarity=0.147 Sum_probs=76.6
Q ss_pred CCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC--cceeEEEecCC-eEEE-EEeCCCCCCceEEEEEcCCCCCCcEE
Q 004368 202 NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVY-ITMDEILRPDKAWLHKLEADQSNDIC 277 (758)
Q Consensus 202 G~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~wspDg-~l~y-~~~~~~~~~~~v~~~~l~~~~~~~~~ 277 (758)
..+|||..+..| +|.+.|.+++......+.. ..-.+.||||| +|+| ++.....+...||+++|.+.....+.
T Consensus 318 ~tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vk 393 (912)
T TIGR02171 318 KAKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVK 393 (912)
T ss_pred eeeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceE
Confidence 357899998655 8999999988776542332 24558999999 8999 66654334556999999887654333
Q ss_pred Eeeec--CCceeeEEEEcCCCcEEEEEecCCc---------ceEEEEEeCCCCC--ceEEeecc
Q 004368 278 LYHEK--DDIYSLGLQASESKKFLFIASESKI---------TRFVFYLDVSKPE--ELRVLTPR 328 (758)
Q Consensus 278 v~~~~--~~~~~~~~~~S~Dg~~l~~~s~~~~---------~~~l~~~d~~~~~--~~~~l~~~ 328 (758)
+--+. -|+| ...+.|..+++...+.+ ...-|.+....|+ .++.|..+
T Consensus 394 l~ve~aaiprw----rv~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkfg~p~kl~dg 453 (912)
T TIGR02171 394 LPVENAAIPRW----RVLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKFGTPKKLFDG 453 (912)
T ss_pred eecccccccce----EecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCCCCchhhhcc
Confidence 32221 2343 24677766554443211 1246888888877 56666543
No 250
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=97.09 E-value=0.036 Score=62.23 Aligned_cols=232 Identities=15% Similarity=0.164 Sum_probs=123.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee----------e--------------------ccc---cCcc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV----------G--------------------KPL---VGVT 238 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~----------~--------------------~~~---~~~~ 238 (758)
.+....+|+|++.||-... ...|++|.+...+.. . .++ .+.+
T Consensus 380 ~v~ca~fSddssmlA~Gf~-----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPV 454 (707)
T KOG0263|consen 380 GVTCAEFSDDSSMLACGFV-----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPV 454 (707)
T ss_pred cceeEeecCCcchhhcccc-----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCce
Confidence 4566789999999885443 355666666532210 0 001 1113
Q ss_pred eeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCC
Q 004368 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (758)
Q Consensus 239 ~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~ 318 (758)
.+..|+||.+++..+..+. .+.++.+.+- .-.++|...... ...+.++|-|-|.+- .+...+.+||..|-..
T Consensus 455 yg~sFsPd~rfLlScSED~----svRLWsl~t~--s~~V~y~GH~~P-VwdV~F~P~GyYFat-as~D~tArLWs~d~~~ 526 (707)
T KOG0263|consen 455 YGCSFSPDRRFLLSCSEDS----SVRLWSLDTW--SCLVIYKGHLAP-VWDVQFAPRGYYFAT-ASHDQTARLWSTDHNK 526 (707)
T ss_pred eeeeecccccceeeccCCc----ceeeeecccc--eeEEEecCCCcc-eeeEEecCCceEEEe-cCCCceeeeeecccCC
Confidence 3468999986555543221 2445556654 345566544322 235678899876543 3444556888877643
Q ss_pred CCceEEeecccccee-eEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeec-CCCCceeeeEEEeCCEEEEEEEe
Q 004368 319 PEELRVLTPRVVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIP-HRESVKLQDIQLFIDHLAVYERE 396 (758)
Q Consensus 319 ~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~ 396 (758)
+.+.+.....++. +.|.|+..++ .+... ...+-.+|+.++ ....++. +...+....+++.|.+|+ ...+
T Consensus 527 --PlRifaghlsDV~cv~FHPNs~Y~--aTGSs---D~tVRlWDv~~G-~~VRiF~GH~~~V~al~~Sp~Gr~La-Sg~e 597 (707)
T KOG0263|consen 527 --PLRIFAGHLSDVDCVSFHPNSNYV--ATGSS---DRTVRLWDVSTG-NSVRIFTGHKGPVTALAFSPCGRYLA-SGDE 597 (707)
T ss_pred --chhhhcccccccceEEECCccccc--ccCCC---CceEEEEEcCCC-cEEEEecCCCCceEEEEEcCCCceEe-eccc
Confidence 4566666666666 4488877643 33322 234555676653 3334443 333333334445454554 3334
Q ss_pred CCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEE
Q 004368 397 GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVY 458 (758)
Q Consensus 397 ~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~ 458 (758)
+| .|.+|++.. |..+. .+-++..++.+++++.|++.++ ..+...--++|
T Consensus 598 d~--~I~iWDl~~-~~~v~--------~l~~Ht~ti~SlsFS~dg~vLa--sgg~DnsV~lW 646 (707)
T KOG0263|consen 598 DG--LIKIWDLAN-GSLVK--------QLKGHTGTIYSLSFSRDGNVLA--SGGADNSVRLW 646 (707)
T ss_pred CC--cEEEEEcCC-Ccchh--------hhhcccCceeEEEEecCCCEEE--ecCCCCeEEEE
Confidence 44 377899874 33221 1222233455567788887653 34444444444
No 251
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=97.08 E-value=0.21 Score=50.05 Aligned_cols=193 Identities=15% Similarity=0.161 Sum_probs=103.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce-eeccccCc-ceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~-~~~~~~~~-~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
+..+.||+|.++|+=.+. +| .|.|||.-|..- ...+++.. +-.-++||.| .++.-..+. ...|| ++.
T Consensus 58 i~~~~ws~Dsr~ivSaSq-DG----klIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN---~Csiy--~ls 127 (343)
T KOG0286|consen 58 IYAMDWSTDSRRIVSASQ-DG----KLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN---KCSIY--PLS 127 (343)
T ss_pred eeeeEecCCcCeEEeecc-CC----eEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc---eeEEE--ecc
Confidence 567899999999974433 33 689999877543 33355544 4457999999 555444332 22344 444
Q ss_pred CCCCCc-EEE---eeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEee-cCCEE
Q 004368 270 ADQSND-ICL---YHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASH-RGNHF 343 (758)
Q Consensus 270 ~~~~~~-~~v---~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~-dg~~l 343 (758)
+...+. ..+ +. ....|.....+.+|+..| -.+ +....-++|+++++..+.+..+..++.. .++| +++.+
T Consensus 128 ~~d~~g~~~v~r~l~-gHtgylScC~f~dD~~il-T~S---GD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntF 202 (343)
T KOG0286|consen 128 TRDAEGNVRVSRELA-GHTGYLSCCRFLDDNHIL-TGS---GDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTF 202 (343)
T ss_pred cccccccceeeeeec-CccceeEEEEEcCCCceE-ecC---CCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeE
Confidence 331111 111 11 123344445677776543 222 2234566788887634444444444433 4778 66644
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEE-EEEEeCCeeEEEEEEcCC
Q 004368 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA-VYEREGGLQKITTYRLPA 409 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~-~~~~~~g~~~l~v~~l~~ 409 (758)
+ ...-+ ..-+..|+..+...+....++.+ +..+.++++... .+.++++. .++|++..
T Consensus 203 v-Sg~cD----~~aklWD~R~~~c~qtF~ghesD--INsv~ffP~G~afatGSDD~t--cRlyDlRa 260 (343)
T KOG0286|consen 203 V-SGGCD----KSAKLWDVRSGQCVQTFEGHESD--INSVRFFPSGDAFATGSDDAT--CRLYDLRA 260 (343)
T ss_pred E-ecccc----cceeeeeccCcceeEeecccccc--cceEEEccCCCeeeecCCCce--eEEEeecC
Confidence 3 22222 22344566553223334444444 556666665443 34566665 45778874
No 252
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.05 E-value=0.33 Score=49.06 Aligned_cols=207 Identities=15% Similarity=0.216 Sum_probs=105.9
Q ss_pred CceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCc--ceeEEEecCCeEE
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV--TASVEWAGNEALV 250 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~--~~~~~wspDg~l~ 250 (758)
.-++.++.-.++.-.. .+++++|.||.+.|+.+.+..+ .|+.++++ |+.++. .+.+. ..++++..+|.++
T Consensus 7 ~y~~~i~~~~l~g~~~--e~SGLTy~pd~~tLfaV~d~~~----~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~v 79 (248)
T PF06977_consen 7 DYRVVIEAKPLPGILD--ELSGLTYNPDTGTLFAVQDEPG----EIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYV 79 (248)
T ss_dssp T-EEEEEEEE-TT--S---EEEEEEETTTTEEEEEETTTT----EEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEE
T ss_pred CcEEEEeeeECCCccC--CccccEEcCCCCeEEEEECCCC----EEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEE
Confidence 3466666444443221 3889999999999888887765 58889985 566543 45543 5668998777554
Q ss_pred EEEeCCCCCCceEEEEEcCCCCCC----cEEEee--e---cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-
Q 004368 251 YITMDEILRPDKAWLHKLEADQSN----DICLYH--E---KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE- 320 (758)
Q Consensus 251 y~~~~~~~~~~~v~~~~l~~~~~~----~~~v~~--~---~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~- 320 (758)
.+. .+..+++.+++...... +..-+. . .+..+ -+++|.+.++.|++. ..+....||-++.....
T Consensus 80 l~~----Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~-EGla~D~~~~~L~v~-kE~~P~~l~~~~~~~~~~ 153 (248)
T PF06977_consen 80 LSE----ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGF-EGLAYDPKTNRLFVA-KERKPKRLYEVNGFPGGF 153 (248)
T ss_dssp EEE----TTTTEEEEEEE----TT--EEEEEEEE---S---SS---EEEEEETTTTEEEEE-EESSSEEEEEEESTT-SS
T ss_pred EEE----cCCCcEEEEEEeccccccchhhceEEecccccCCCcce-EEEEEcCCCCEEEEE-eCCCChhhEEEccccCcc
Confidence 443 23456888888443211 111111 1 12223 378999988887764 34455678888862211
Q ss_pred ceEEee--ccc------cce-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCccee-eecC-----CCCceeeeEEE
Q 004368 321 ELRVLT--PRV------VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPH-----RESVKLQDIQL 385 (758)
Q Consensus 321 ~~~~l~--~~~------~~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~-----~~~~~~~~~~~ 385 (758)
...... +.. .+. ...+.|..++||+++... ..|..+|.++.-.... +... ..-...+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es----~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~ 229 (248)
T PF06977_consen 154 DLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES----RLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAF 229 (248)
T ss_dssp --EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT----TEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE
T ss_pred ceeeccccccccccceeccccceEEcCCCCeEEEEECCC----CeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEE
Confidence 111111 100 011 123678888999998875 5788888654211112 2221 11235788999
Q ss_pred eCCEEEEEEEeC
Q 004368 386 FIDHLAVYEREG 397 (758)
Q Consensus 386 ~~~~l~~~~~~~ 397 (758)
+.+.-.++.++-
T Consensus 230 d~~G~LYIvsEp 241 (248)
T PF06977_consen 230 DPDGNLYIVSEP 241 (248)
T ss_dssp -TT--EEEEETT
T ss_pred CCCCCEEEEcCC
Confidence 887655555543
No 253
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.02 E-value=0.016 Score=67.26 Aligned_cols=205 Identities=15% Similarity=0.078 Sum_probs=100.5
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC----Cce----ee------ccccCcceeEEEecCCeEEEEEe
Q 004368 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET----GTP----VG------KPLVGVTASVEWAGNEALVYITM 254 (758)
Q Consensus 189 ~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~----g~~----~~------~~~~~~~~~~~wspDg~l~y~~~ 254 (758)
...++-++.++|||.++|=.-. +. ...+.||..+. .+. ++ ..-.+....+.|||||+.++...
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq--~~-d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGS 88 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQ--VL-DGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGS 88 (942)
T ss_pred CCeeEEEEEecCCceeEecCCc--cc-cccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeecc
Confidence 3345778899999999873210 01 12233554332 000 00 01133466688999994444444
Q ss_pred CCCCCCceEEEEEc-C------C-CCCC------cEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 255 DEILRPDKAWLHKL-E------A-DQSN------DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 255 ~~~~~~~~v~~~~l-~------~-~~~~------~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
|+ +--.+|...- + + +... ...++.+.+. -..++.||||+.+++-.+.+ +.|.+++..+-+
T Consensus 89 DD--~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~-DV~Dv~Wsp~~~~lvS~s~D---nsViiwn~~tF~ 162 (942)
T KOG0973|consen 89 DD--RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDS-DVLDVNWSPDDSLLVSVSLD---NSVIIWNAKTFE 162 (942)
T ss_pred Cc--ceEEEeeecccCCcccccccccccccceeeEEEEEecCCC-ccceeccCCCccEEEEeccc---ceEEEEccccce
Confidence 43 2223344331 1 1 0010 1234444333 34578999999988754433 346667776654
Q ss_pred ceEEeeccccce-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCC----Ccee--eeEEEeCCEEEEE
Q 004368 321 ELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE----SVKL--QDIQLFIDHLAVY 393 (758)
Q Consensus 321 ~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~----~~~~--~~~~~~~~~l~~~ 393 (758)
..+.+..+..-+ ...|+|-|++|+-.+++. .-+++++. +.+..+.+..+-+ ...+ .+++++|++|+..
T Consensus 163 ~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDr---tikvwrt~--dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~ 237 (942)
T KOG0973|consen 163 LLKVLRGHQSLVKGVSWDPIGKYFASQSDDR---TLKVWRTS--DWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASP 237 (942)
T ss_pred eeeeeecccccccceEECCccCeeeeecCCc---eEEEEEcc--cceeeEeeccchhhCCCcceeeecccCCCcCeecch
Confidence 233333222212 234999999777666543 35566532 2112221211111 1112 3556667776543
Q ss_pred -EEeCCeeEEEEEEc
Q 004368 394 -EREGGLQKITTYRL 407 (758)
Q Consensus 394 -~~~~g~~~l~v~~l 407 (758)
+.+++.+-+.|+..
T Consensus 238 nA~n~~~~~~~IieR 252 (942)
T KOG0973|consen 238 NAVNGGKSTIAIIER 252 (942)
T ss_pred hhccCCcceeEEEec
Confidence 34455555555544
No 254
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.99 E-value=0.00048 Score=62.70 Aligned_cols=114 Identities=13% Similarity=0.153 Sum_probs=71.9
Q ss_pred HHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCC---CCCCCC-hhhhhccCCCCCHH
Q 004368 583 AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLD---PTIPLT-TAEWEEWGDPWKEE 658 (758)
Q Consensus 583 ~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~---~~~~~~-~~~~~e~g~p~~~~ 658 (758)
-.|++++-. |.+..+.|.|+||+.++...-++|++|..+|+.+|+.|...+..+ .+.-+. ...| -+| ..+|.
T Consensus 91 erYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg~yyddDv~ynsP~dy-lpg-~~dp~ 166 (227)
T COG4947 91 ERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFGGYYDDDVYYNSPSDY-LPG-LADPF 166 (227)
T ss_pred HHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhccccccCceeecChhhh-ccC-CcChH
Confidence 345666543 577899999999999999999999999999999999996544321 111000 0000 001 01222
Q ss_pred HHHHHHhcCcccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEE
Q 004368 659 FYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILL 714 (758)
Q Consensus 659 ~~~~l~~~sp~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 714 (758)
..+.++. . -+.+.+|..|+..+ +..++-+.|.+..++..+..
T Consensus 167 ~l~rlr~-----------~-~~vfc~G~e~~~L~--~~~~L~~~l~dKqipaw~~~ 208 (227)
T COG4947 167 RLERLRR-----------I-DMVFCIGDEDPFLD--NNQHLSRLLSDKQIPAWMHV 208 (227)
T ss_pred HHHHHhh-----------c-cEEEEecCcccccc--chHHHHHHhccccccHHHHH
Confidence 2222221 1 26677799888766 66788888888777764433
No 255
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=96.98 E-value=0.088 Score=51.91 Aligned_cols=189 Identities=16% Similarity=0.131 Sum_probs=105.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
++..+.++.|.+++. .|+....+.+||+++|+.+.. ..+...-.+.|+++| .++++..+.-.....|.+.++.
T Consensus 54 avW~~Did~~s~~li-----TGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~ 128 (327)
T KOG0643|consen 54 AVWCCDIDWDSKHLI-----TGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR 128 (327)
T ss_pred eEEEEEecCCcceee-----eccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence 566677778888876 466678999999999998864 333345668999999 7777776655556667777776
Q ss_pred CCC----C-CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe-eccccce-eeEEeecCCE
Q 004368 270 ADQ----S-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL-TPRVVGV-DTAASHRGNH 342 (758)
Q Consensus 270 ~~~----~-~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l-~~~~~~~-~~~~s~dg~~ 342 (758)
... . +..+....++... ...-|+|-+++|+..-. ...|-.+|+.++...... ......+ ...+++|..+
T Consensus 129 ~~~~~~~s~ep~~kI~t~~ski-t~a~Wg~l~~~ii~Ghe---~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~ 204 (327)
T KOG0643|consen 129 DDSSDIDSEEPYLKIPTPDSKI-TSALWGPLGETIIAGHE---DGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTY 204 (327)
T ss_pred CChhhhcccCceEEecCCccce-eeeeecccCCEEEEecC---CCcEEEEEcccCceeeechhhhccccccccccCCcce
Confidence 332 1 2233333333333 24569999999875322 234667788776411111 0011112 2237888764
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEE
Q 004368 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYER 395 (758)
Q Consensus 343 l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~ 395 (758)
++-. ..+ .+.+|+ |..+....+....+. .+.-..+++..+++++..-
T Consensus 205 FiT~-s~D--ttakl~--D~~tl~v~Kty~te~-PvN~aaisP~~d~VilgGG 251 (327)
T KOG0643|consen 205 FITG-SKD--TTAKLV--DVRTLEVLKTYTTER-PVNTAAISPLLDHVILGGG 251 (327)
T ss_pred EEec-ccC--ccceee--eccceeeEEEeeecc-cccceecccccceEEecCC
Confidence 3332 222 245554 333221111222221 2233455666677776543
No 256
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=96.97 E-value=0.035 Score=63.37 Aligned_cols=165 Identities=14% Similarity=0.055 Sum_probs=96.3
Q ss_pred CceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCCe-EE
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEA-LV 250 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg~-l~ 250 (758)
.+..+|+.-++ .+....++-||+++|++.+ .+.|.++++.++..... ..++-+..+.+.|.+. ++
T Consensus 87 ~~~~iL~Rftl-------p~r~~~v~g~g~~iaagsd-----D~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLA 154 (933)
T KOG1274|consen 87 EEDTILARFTL-------PIRDLAVSGSGKMIAAGSD-----DTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLA 154 (933)
T ss_pred Cccceeeeeec-------cceEEEEecCCcEEEeecC-----ceeEEEEeccccchheeecccCCceeeeeEcCCCCEEE
Confidence 45556666544 3567799999999997554 57899999887654332 2333366689999994 54
Q ss_pred EEEeCCCCCCceEEEEEcCCCCCCcEE--Ee---eecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe
Q 004368 251 YITMDEILRPDKAWLHKLEADQSNDIC--LY---HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (758)
Q Consensus 251 y~~~~~~~~~~~v~~~~l~~~~~~~~~--v~---~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l 325 (758)
....+. +|+++++.++.....+ +. +..+......++|+|+|..+++...+ ..|-+++..+-+....|
T Consensus 155 vss~dG-----~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d---~~Vkvy~r~~we~~f~L 226 (933)
T KOG1274|consen 155 VSSCDG-----KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD---NTVKVYSRKGWELQFKL 226 (933)
T ss_pred EEecCc-----eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC---CeEEEEccCCceeheee
Confidence 444443 4788888755321111 11 11113445568999996665554433 23556666554411122
Q ss_pred eccc--ccee-eEEeecCCEEEEEEcCCCCCCcEEEEEeCC
Q 004368 326 TPRV--VGVD-TAASHRGNHFFITRRSDELFNSELLACPVD 363 (758)
Q Consensus 326 ~~~~--~~~~-~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~ 363 (758)
.... ..+. ..|||.|++|+..+- +++|.++|++
T Consensus 227 r~~~~ss~~~~~~wsPnG~YiAAs~~-----~g~I~vWnv~ 262 (933)
T KOG1274|consen 227 RDKLSSSKFSDLQWSPNGKYIAASTL-----DGQILVWNVD 262 (933)
T ss_pred cccccccceEEEEEcCCCcEEeeecc-----CCcEEEEecc
Confidence 2211 1122 349999998876543 3457777765
No 257
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=96.96 E-value=0.081 Score=55.93 Aligned_cols=211 Identities=14% Similarity=0.182 Sum_probs=115.7
Q ss_pred eEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceee-ccccCc-ceeEEEecCC-eEEEE
Q 004368 176 HLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV-TASVEWAGNE-ALVYI 252 (758)
Q Consensus 176 ~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~-~~~~~wspDg-~l~y~ 252 (758)
..|-|.|.-...+ -.|.+++|.|.-..|. +...+| ..+||-+|=++...++ ..+... .....|+|+| ..+++
T Consensus 201 krlkDaNa~~ps~--~~I~sv~FHp~~plll-vaG~d~--~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~ 275 (514)
T KOG2055|consen 201 KRLKDANAAHPSH--GGITSVQFHPTAPLLL-VAGLDG--TLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFT 275 (514)
T ss_pred EeecccccCCcCc--CCceEEEecCCCceEE-EecCCC--cEEEEEecCccChhheeeeeccCccceeeecCCCceEEEe
Confidence 3556777654333 3678889999776554 444444 3556666655444333 234443 4457899999 56666
Q ss_pred EeCCCCCCceEEEEEcCCCCCCcEE-EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc
Q 004368 253 TMDEILRPDKAWLHKLEADQSNDIC-LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG 331 (758)
Q Consensus 253 ~~~~~~~~~~v~~~~l~~~~~~~~~-v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 331 (758)
+... . -+|.+++.+.+...+- ++... ....-.+..|+|+.+|++..+. ..|+++...+++ +..-.+-...
T Consensus 276 s~rr---k-y~ysyDle~ak~~k~~~~~g~e-~~~~e~FeVShd~~fia~~G~~---G~I~lLhakT~e-li~s~KieG~ 346 (514)
T KOG2055|consen 276 SGRR---K-YLYSYDLETAKVTKLKPPYGVE-EKSMERFEVSHDSNFIAIAGNN---GHIHLLHAKTKE-LITSFKIEGV 346 (514)
T ss_pred cccc---e-EEEEeeccccccccccCCCCcc-cchhheeEecCCCCeEEEcccC---ceEEeehhhhhh-hhheeeeccE
Confidence 5432 2 3788888766432211 11111 2223346789999999886443 468888887766 2211121122
Q ss_pred e-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcC
Q 004368 332 V-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 332 ~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~ 408 (758)
+ ...|+.||+.|++... .+.||.+|+.........+ .+..+.-..+++.-+ .++.+.++.|. +-||+.+
T Consensus 347 v~~~~fsSdsk~l~~~~~-----~GeV~v~nl~~~~~~~rf~-D~G~v~gts~~~S~ng~ylA~GS~~Gi--VNIYd~~ 417 (514)
T KOG2055|consen 347 VSDFTFSSDSKELLASGG-----TGEVYVWNLRQNSCLHRFV-DDGSVHGTSLCISLNGSYLATGSDSGI--VNIYDGN 417 (514)
T ss_pred EeeEEEecCCcEEEEEcC-----CceEEEEecCCcceEEEEe-ecCccceeeeeecCCCceEEeccCcce--EEEeccc
Confidence 2 2338889988776633 2579999997643222222 222222334443332 22234445554 5577654
No 258
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.92 E-value=0.014 Score=61.83 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=60.4
Q ss_pred ChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 535 NSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 535 ~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
......++++|.-|++++.|+-...-.. ........+++..|++.+.+.. -.++|-++|+|.||.+.+++++
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd~~~~~------~~~edYi~e~l~~aid~v~~it--g~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPDASLAA------KNLEDYILEGLSEAIDTVKDIT--GQKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCchHhhhh------ccHHHHHHHHHHHHHHHHHHHh--CccccceeeEecchHHHHHHHH
Confidence 3456788999999999998754432111 1111111245556777777653 3489999999999999998888
Q ss_pred hCCCc-eeEEEEcCCccc
Q 004368 615 MRPDL-FKAAVAAVPFVD 631 (758)
Q Consensus 615 ~~p~~-f~a~v~~~~~~d 631 (758)
..+.. .+.+....-.+|
T Consensus 201 ~~~~k~I~S~T~lts~~D 218 (445)
T COG3243 201 LMAAKRIKSLTLLTSPVD 218 (445)
T ss_pred hhhhcccccceeeecchh
Confidence 88876 666666655555
No 259
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=96.90 E-value=0.12 Score=54.33 Aligned_cols=151 Identities=13% Similarity=0.157 Sum_probs=93.7
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc---cCc-ceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---VGV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~---~~~-~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
+......|.|.|+...+++ ..+-.-|+.+|..+.... .++ ..+.+|.|||-||-+...+ ..|.++++
T Consensus 306 V~~ls~h~tgeYllsAs~d-----~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d----~~vkiwdl 376 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASND-----GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPD----GVVKIWDL 376 (506)
T ss_pred ceeeeeccCCcEEEEecCC-----ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCC----ceEEEEEc
Confidence 4567888999999877663 245567788887654321 123 5678999999554443322 35777888
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec--cccceeeEEeecCCEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVVGVDTAASHRGNHFFIT 346 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~--~~~~~~~~~s~dg~~l~~~ 346 (758)
.+.. ...-|...... .-.++||.+|-||+..+++.. |.++|+..-+..+.+.- ..+-..+.++..|..+.+.
T Consensus 377 ks~~--~~a~Fpght~~-vk~i~FsENGY~Lat~add~~---V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 377 KSQT--NVAKFPGHTGP-VKAISFSENGYWLATAADDGS---VKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA 450 (506)
T ss_pred CCcc--ccccCCCCCCc-eeEEEeccCceEEEEEecCCe---EEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence 7652 33445443222 336789999999988665432 78889876442332221 2222345588889887766
Q ss_pred EcCCCCCCcEEEEEeCC
Q 004368 347 RRSDELFNSELLACPVD 363 (758)
Q Consensus 347 s~~~~~~~~~L~~~~~~ 363 (758)
.+ ..++|.+.-.
T Consensus 451 g~-----~l~Vy~~~k~ 462 (506)
T KOG0289|consen 451 GS-----DLQVYICKKK 462 (506)
T ss_pred cc-----eeEEEEEecc
Confidence 22 3678887643
No 260
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.85 E-value=1.2 Score=50.13 Aligned_cols=162 Identities=13% Similarity=0.086 Sum_probs=100.7
Q ss_pred eeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCC--cceEEEEEe
Q 004368 239 ASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLD 315 (758)
Q Consensus 239 ~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~--~~~~l~~~d 315 (758)
+.++-|||+ .++|.-...+.+.+.+...++.+++.-...+ ....-++.|.+|++.+++...+. ....||.-.
T Consensus 132 g~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i-----~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~ 206 (682)
T COG1770 132 GAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEI-----TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHR 206 (682)
T ss_pred eeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhh-----cccccceEEecCCCeEEEEEEcCCCCcceEEEEe
Confidence 456778999 6888777667788889999998874211111 11223567999999999988653 347899988
Q ss_pred CCCCC-ceEEeeccccc-eeeE--EeecCCEEEEEEcCCCCCCcEEEEEeCCCCCccee-eecCCCCceeeeEEEeCCEE
Q 004368 316 VSKPE-ELRVLTPRVVG-VDTA--ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHL 390 (758)
Q Consensus 316 ~~~~~-~~~~l~~~~~~-~~~~--~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~l 390 (758)
+.+.. .-+.+....+. .... -+...++|++..+. ....+++.++.+.++...+ +.+...+... .++-.++..
T Consensus 207 ~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~--~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY-~~eh~~d~f 283 (682)
T COG1770 207 LGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGS--HITSEVRLLDADDPEAEPKVVLPRENGVEY-SVEHGGDRF 283 (682)
T ss_pred cCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCC--CcceeEEEEecCCCCCceEEEEEcCCCcEE-eeeecCcEE
Confidence 87733 23334433222 2111 34455666666543 3457888888877665545 4444333322 445557888
Q ss_pred EEEEEeCCeeEEEEEEcCC
Q 004368 391 AVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 391 ~~~~~~~g~~~l~v~~l~~ 409 (758)
++..+.+| ....++..+.
T Consensus 284 ~i~sN~~g-knf~l~~ap~ 301 (682)
T COG1770 284 YILSNADG-KNFKLVRAPV 301 (682)
T ss_pred EEEecCCC-cceEEEEccC
Confidence 88888888 4455666553
No 261
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.84 E-value=0.0087 Score=65.32 Aligned_cols=165 Identities=19% Similarity=0.171 Sum_probs=94.8
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHH-cCcE--EEEEecCCC-CCCchhHHhcccccCCcChHhHHHHHHHH--HHH
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFI--FAIAQIRGG-GELGRQWYENGKFLKKKNTFTDFIACAEY--LIK 588 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~--v~~~~~RG~-g~~G~~~~~~~~~~~~~~~~~D~~~~~~~--l~~ 588 (758)
-.|++++.||++.......|...++.++. .|-+ +..+|++-. |+ .+-....+-++.+..+ +.-
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei 243 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEI 243 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhh
Confidence 36899999998733223334444444443 2433 334444421 11 1101112223333332 222
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhhCCCce-eEEEEcCCccchhhccCCCCCCCChhhhhccCCCCCHHHHHHHHhcC
Q 004368 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLF-KAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWGDPWKEEFYFYMKSYS 667 (758)
Q Consensus 589 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f-~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~s 667 (758)
.+-.--..|.++|+|+|..++..+...+-|.+ .|+||..-.+|-.. -+ -|.. |+.. .
T Consensus 244 ~gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vd------gp--------rgir-DE~L----l--- 301 (784)
T KOG3253|consen 244 TGEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVD------GP--------RGIR-DEAL----L--- 301 (784)
T ss_pred hccCCCCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCC------cc--------cCCc-chhh----H---
Confidence 24445588999999999888887777665554 55554432222110 00 0222 2111 1
Q ss_pred cccccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 668 PVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 668 p~~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
..+.| +||+.|.+|.++++..-+++.+++++. ++++++. +++|..
T Consensus 302 ------dmk~P-VLFV~Gsnd~mcspn~ME~vreKMqA~---~elhVI~---~adhsm 346 (784)
T KOG3253|consen 302 ------DMKQP-VLFVIGSNDHMCSPNSMEEVREKMQAE---VELHVIG---GADHSM 346 (784)
T ss_pred ------hcCCc-eEEEecCCcccCCHHHHHHHHHHhhcc---ceEEEec---CCCccc
Confidence 23566 999999999999999999999999875 4577776 899976
No 262
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.84 E-value=0.54 Score=49.10 Aligned_cols=246 Identities=17% Similarity=0.203 Sum_probs=114.8
Q ss_pred eeEEECCCCCEEEEEE----e-CCCCeEEEEEEEECCCCceeec-cccC-----c---ceeEEEecCCeEEEEEeCCCCC
Q 004368 194 GCFQVSPDNKLVAYAE----D-TKGDEIYTVYVIDIETGTPVGK-PLVG-----V---TASVEWAGNEALVYITMDEILR 259 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~----~-~~G~e~~~l~v~dl~~g~~~~~-~~~~-----~---~~~~~wspDg~l~y~~~~~~~~ 259 (758)
+.+.+||||+.+.... . ..|...--|-++|.+|=.+..+ .++. + ...++.|+||+++|+..-. .
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~T--P 116 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFT--P 116 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEES--S
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccC--C
Confidence 4678999999997542 1 2233333578899998665543 3332 1 3446899999555554311 1
Q ss_pred CceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEE---eeccccc--e-e
Q 004368 260 PDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV---LTPRVVG--V-D 333 (758)
Q Consensus 260 ~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~---l~~~~~~--~-~ 333 (758)
...|-.+++... ..+-+-+-+.+.. +.-+...++..+. ..++-..+.+|.++.. .+. +.....+ + .
T Consensus 117 a~SVtVVDl~~~----kvv~ei~~PGC~~-iyP~~~~~F~~lC--~DGsl~~v~Ld~~Gk~-~~~~t~~F~~~~dp~f~~ 188 (342)
T PF06433_consen 117 ATSVTVVDLAAK----KVVGEIDTPGCWL-IYPSGNRGFSMLC--GDGSLLTVTLDADGKE-AQKSTKVFDPDDDPLFEH 188 (342)
T ss_dssp SEEEEEEETTTT----EEEEEEEGTSEEE-EEEEETTEEEEEE--TTSCEEEEEETSTSSE-EEEEEEESSTTTS-B-S-
T ss_pred CCeEEEEECCCC----ceeeeecCCCEEE-EEecCCCceEEEe--cCCceEEEEECCCCCE-eEeeccccCCCCcccccc
Confidence 234667777654 2222223343332 2222222222211 1122222333333222 111 1111111 1 1
Q ss_pred eEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc---cee-eecCC---CCce-----eeeEEEeCCEEEEEEEe-----
Q 004368 334 TAASHRGNHFFITRRSDELFNSELLACPVDNTSE---TTV-LIPHR---ESVK-----LQDIQLFIDHLAVYERE----- 396 (758)
Q Consensus 334 ~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~---~~~-l~~~~---~~~~-----~~~~~~~~~~l~~~~~~----- 396 (758)
..++..+.+++|.|-. +.|+.+++.+... ..| +.... .+.. +-.+....++||+.--.
T Consensus 189 ~~~~~~~~~~~F~Sy~-----G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gs 263 (342)
T PF06433_consen 189 PAYSRDGGRLYFVSYE-----GNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGS 263 (342)
T ss_dssp -EEETTTTEEEEEBTT-----SEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-
T ss_pred cceECCCCeEEEEecC-----CEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCC
Confidence 2345667788887653 5788888865321 223 22111 1112 22233334677765322
Q ss_pred --CCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCc
Q 004368 397 --GGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGI 466 (758)
Q Consensus 397 --~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~ 466 (758)
++..+||++++.. ++.+ .++.+..+..+ ++.+.+..-+.|..+. .-..++.+|..+|+
T Consensus 264 HKdpgteVWv~D~~t-~krv------~Ri~l~~~~~S---i~Vsqd~~P~L~~~~~--~~~~l~v~D~~tGk 323 (342)
T PF06433_consen 264 HKDPGTEVWVYDLKT-HKRV------ARIPLEHPIDS---IAVSQDDKPLLYALSA--GDGTLDVYDAATGK 323 (342)
T ss_dssp TTS-EEEEEEEETTT-TEEE------EEEEEEEEESE---EEEESSSS-EEEEEET--TTTEEEEEETTT--
T ss_pred ccCCceEEEEEECCC-CeEE------EEEeCCCccce---EEEccCCCcEEEEEcC--CCCeEEEEeCcCCc
Confidence 3456789998874 4433 33444333222 2334455555565543 23579999999987
No 263
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.83 E-value=0.0074 Score=67.21 Aligned_cols=132 Identities=13% Similarity=0.022 Sum_probs=77.3
Q ss_pred CeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCC----------------hHHHHHHHcCcEEEEEec-CCCCC
Q 004368 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFN----------------SSRLSLLDRGFIFAIAQI-RGGGE 558 (758)
Q Consensus 496 G~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~----------------~~~~~l~~~G~~v~~~~~-RG~g~ 558 (758)
+..+.-|++..+.. ....|+||+.+||||.+...+.- ..-..|.+.+ .++.+|. +|.|-
T Consensus 60 ~~~lFyw~~~s~~~---~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~-~~l~iDqP~G~G~ 135 (462)
T PTZ00472 60 DKHYFYWAFGPRNG---NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEA-YVIYVDQPAGVGF 135 (462)
T ss_pred CceEEEEEEEcCCC---CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccccc-CeEEEeCCCCcCc
Confidence 45676666554432 34679999999999987543211 1112455554 4555664 56553
Q ss_pred CchhHHhcccccCCcChHhHHHHHHHHHHH-cCCCCCCcEEEEEeChhHHHHHHHHhh----CC------CceeEEEEcC
Q 004368 559 LGRQWYENGKFLKKKNTFTDFIACAEYLIK-NCYCTKEKLCIEGRSAGGLLIGAVLNM----RP------DLFKAAVAAV 627 (758)
Q Consensus 559 ~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~----~p------~~f~a~v~~~ 627 (758)
.-..... .........+|+..+++...+ .......++.|+|+||||..+..++.+ .. =-++++++..
T Consensus 136 S~~~~~~--~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGN 213 (462)
T PTZ00472 136 SYADKAD--YDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGN 213 (462)
T ss_pred ccCCCCC--CCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEec
Confidence 2111000 011112345677776664433 333456899999999999976555543 11 1378999999
Q ss_pred Cccchh
Q 004368 628 PFVDVL 633 (758)
Q Consensus 628 ~~~d~~ 633 (758)
|++|..
T Consensus 214 g~~dp~ 219 (462)
T PTZ00472 214 GLTDPY 219 (462)
T ss_pred cccChh
Confidence 988854
No 264
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=96.82 E-value=0.13 Score=55.91 Aligned_cols=230 Identities=10% Similarity=0.018 Sum_probs=130.6
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC-cceeEEEecCC---eEEEEEeCCCCCCceEEEEEcCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg---~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
.++||+|..+.|+.+. ..++++++.+-+...-.+.. .++.++.||.+ .++.-.....+.|..|.++...-
T Consensus 130 ~~qfs~dEsl~arlv~------nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~ 203 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS------NEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPE 203 (566)
T ss_pred ccccccchhhhhhhhc------ceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEecccc
Confidence 6789999999888774 46888888763322212221 24568999986 34433333445566677766652
Q ss_pred CCCCcEEEeeecCCce----eeEEEEcCCCcEEEEEecC---C------cceEEEEEeCCCCCceEEeeccccceeeEEe
Q 004368 271 DQSNDICLYHEKDDIY----SLGLQASESKKFLFIASES---K------ITRFVFYLDVSKPEELRVLTPRVVGVDTAAS 337 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~----~~~~~~S~Dg~~l~~~s~~---~------~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s 337 (758)
.... ..+ . ...| .+...|.+-|.-|++.... . +.+.||+++.++......|.+...-..+.|+
T Consensus 204 ~~~~-~~~-a--~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~ 279 (566)
T KOG2315|consen 204 EGQH-QPV-A--NKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWS 279 (566)
T ss_pred cccc-chh-h--hccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEEC
Confidence 2111 111 0 1112 2456799988877654422 1 3468999999843333344433333445599
Q ss_pred ecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccc
Q 004368 338 HRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSL 417 (758)
Q Consensus 338 ~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l 417 (758)
++|+.+.++..-- -.++-..|+.. ...--++++... -.-|++.++.+++..-.+-...+.+|+... .
T Consensus 280 ~s~~EF~VvyGfM---PAkvtifnlr~--~~v~df~egpRN-~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n--~----- 346 (566)
T KOG2315|consen 280 PSGREFAVVYGFM---PAKVTIFNLRG--KPVFDFPEGPRN-TAFFNPHGNIILLAGFGNLPGDMEVWDVPN--R----- 346 (566)
T ss_pred CCCCEEEEEEecc---cceEEEEcCCC--CEeEeCCCCCcc-ceEECCCCCEEEEeecCCCCCceEEEeccc--h-----
Confidence 9999998886542 24555666653 222234444332 235677788888877666666788888763 1
Q ss_pred cCCceeeccCcccccCCCCcccCCcEEEEEEecC
Q 004368 418 QGGKSVEFIDPVYSIDPSESVFSSRILRFHYSSL 451 (758)
Q Consensus 418 ~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~sS~ 451 (758)
+.|.-+... ......|++||..+....+++
T Consensus 347 ---K~i~~~~a~-~tt~~eW~PdGe~flTATTaP 376 (566)
T KOG2315|consen 347 ---KLIAKFKAA-NTTVFEWSPDGEYFLTATTAP 376 (566)
T ss_pred ---hhccccccC-CceEEEEcCCCcEEEEEeccc
Confidence 222211111 112356788888776555554
No 265
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=96.80 E-value=0.061 Score=59.45 Aligned_cols=157 Identities=13% Similarity=0.162 Sum_probs=88.3
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC------cceeEEEecCC-eEEEEEeCCCCCCce
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG------VTASVEWAGNE-ALVYITMDEILRPDK 262 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~------~~~~~~wspDg-~l~y~~~~~~~~~~~ 262 (758)
..-+...++||||++|||+.-. +..||-+..+. .......+. ....+.|+-|+ .+++++.+. .+
T Consensus 382 ~~nIs~~aiSPdg~~Ia~st~~----~~~iy~L~~~~-~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~----~~ 452 (691)
T KOG2048|consen 382 KENISCAAISPDGNLIAISTVS----RTKIYRLQPDP-NVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNI----FS 452 (691)
T ss_pred ccceeeeccCCCCCEEEEeecc----ceEEEEeccCc-ceeEEEeccchhhhccceeeEEEecCceEEEEeccc----ce
Confidence 3457788999999999998632 12333333322 211111111 13457889999 788877332 23
Q ss_pred EEEEEcCCCCCCcEEEeeec-CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccc--ceeeEEee-
Q 004368 263 AWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVV--GVDTAASH- 338 (758)
Q Consensus 263 v~~~~l~~~~~~~~~v~~~~-~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~--~~~~~~s~- 338 (758)
+....+.++..+...-.... .......+..|+||.||++.+ +...|+++++++.+ .+.+..+.. .....++|
T Consensus 453 le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~---t~g~I~v~nl~~~~-~~~l~~rln~~vTa~~~~~~ 528 (691)
T KOG2048|consen 453 LEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS---TRGQIFVYNLETLE-SHLLKVRLNIDVTAAAFSPF 528 (691)
T ss_pred eEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEe---ccceEEEEEcccce-eecchhccCcceeeeecccc
Confidence 55555555533222222221 222334577899999998865 44679999999887 555443332 11223553
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
+-..|++.+.. .+++..|++.
T Consensus 529 ~~~~lvvats~-----nQv~efdi~~ 549 (691)
T KOG2048|consen 529 VRNRLVVATSN-----NQVFEFDIEA 549 (691)
T ss_pred ccCcEEEEecC-----CeEEEEecch
Confidence 33456555442 4688777743
No 266
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.79 E-value=0.016 Score=64.20 Aligned_cols=141 Identities=14% Similarity=0.098 Sum_probs=78.3
Q ss_pred EEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCC---------C--------hHHHHHHHcCcEEEEE
Q 004368 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAF---------N--------SSRLSLLDRGFIFAIA 551 (758)
Q Consensus 489 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~---------~--------~~~~~l~~~G~~v~~~ 551 (758)
+.+....+..+.-|++..++. ....|+||+..||||.+...+. . .....|.+. ..++.+
T Consensus 16 l~~~~~~~~~lfyw~~~s~~~---~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~i 91 (415)
T PF00450_consen 16 LPVNDNENAHLFYWFFESRND---PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFI 91 (415)
T ss_dssp EEECTTTTEEEEEEEEE-SSG---GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE
T ss_pred EecCCCCCcEEEEEEEEeCCC---CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEE
Confidence 344445667787775544432 3567999999999997653210 0 011234433 678888
Q ss_pred ecCCCCCCchhHHhcccccCCcChHhHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHH----HHHhhC------CCce
Q 004368 552 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIG----AVLNMR------PDLF 620 (758)
Q Consensus 552 ~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~----~~~~~~------p~~f 620 (758)
|.+-+.||...-........-....+|+..++. ++...+......+.|.|.||||..+. .++.+. +=.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 988777665432211111112334456666554 45555556667999999999999543 333444 2248
Q ss_pred eEEEEcCCccchh
Q 004368 621 KAAVAAVPFVDVL 633 (758)
Q Consensus 621 ~a~v~~~~~~d~~ 633 (758)
+++++..|++|..
T Consensus 172 kGi~IGng~~dp~ 184 (415)
T PF00450_consen 172 KGIAIGNGWIDPR 184 (415)
T ss_dssp EEEEEESE-SBHH
T ss_pred ccceecCcccccc
Confidence 9999999998853
No 267
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=96.78 E-value=0.2 Score=50.61 Aligned_cols=160 Identities=14% Similarity=0.181 Sum_probs=86.1
Q ss_pred CceEEeecccccCCC---C-eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-
Q 004368 174 PEHLILDENVKAEGR---G-FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE- 247 (758)
Q Consensus 174 ~~~vllD~n~~~~~~---~-~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg- 247 (758)
+.-|+.|-.++.-.. + ...+.++.||+||++|.=++. ...|.+||+..|..+.. .++.-..+..|.|-.
T Consensus 45 G~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~-----D~si~lwDl~~gs~l~rirf~spv~~~q~hp~k~ 119 (405)
T KOG1273|consen 45 GRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSR-----DWSIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKR 119 (405)
T ss_pred CcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecC-----CceeEEEeccCCCceeEEEccCccceeeeccccC
Confidence 445666654443211 1 246889999999999974443 35689999999987653 444445557888765
Q ss_pred -eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEE---EEcCCCcEEEEEecCCcceEEEEEeCCCCC--c
Q 004368 248 -ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGL---QASESKKFLFIASESKITRFVFYLDVSKPE--E 321 (758)
Q Consensus 248 -~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~---~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~--~ 321 (758)
+.+.+-.+.. -++..++.+ ....+-...+....... .+.+-|+||+.. ++++ .+.++|.++-+ .
T Consensus 120 n~~va~~~~~s-----p~vi~~s~~--~h~~Lp~d~d~dln~sas~~~fdr~g~yIitG-tsKG--kllv~~a~t~e~va 189 (405)
T KOG1273|consen 120 NKCVATIMEES-----PVVIDFSDP--KHSVLPKDDDGDLNSSASHGVFDRRGKYIITG-TSKG--KLLVYDAETLECVA 189 (405)
T ss_pred CeEEEEEecCC-----cEEEEecCC--ceeeccCCCccccccccccccccCCCCEEEEe-cCcc--eEEEEecchheeee
Confidence 4444444332 233344432 12222111222211122 267889997653 3333 45666776654 1
Q ss_pred eEEeeccccce-eeEEeecCCEEEEEEcC
Q 004368 322 LRVLTPRVVGV-DTAASHRGNHFFITRRS 349 (758)
Q Consensus 322 ~~~l~~~~~~~-~~~~s~dg~~l~~~s~~ 349 (758)
.-+++.- ..+ ...++-.|+.|++.+.+
T Consensus 190 s~rits~-~~IK~I~~s~~g~~liiNtsD 217 (405)
T KOG1273|consen 190 SFRITSV-QAIKQIIVSRKGRFLIINTSD 217 (405)
T ss_pred eeeechh-eeeeEEEEeccCcEEEEecCC
Confidence 2222221 112 22377788877776554
No 268
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=96.75 E-value=0.059 Score=58.23 Aligned_cols=164 Identities=11% Similarity=0.105 Sum_probs=96.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCc-ceeEEEecCC-eEEEEEeCCCCC-------Cc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-TASVEWAGNE-ALVYITMDEILR-------PD 261 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~-~~~~~wspDg-~l~y~~~~~~~~-------~~ 261 (758)
.|..+.|||-+..|||-.....+--.++-++.+-+++.++. .+-++ .-.+-|-..| .|.+-....... +.
T Consensus 348 gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~ 427 (698)
T KOG2314|consen 348 GIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNL 427 (698)
T ss_pred cccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeE
Confidence 47789999999999999887766567788888888877653 33333 2346898888 666544322111 12
Q ss_pred eEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCC--cceEEEEEeCCCCCceEEeecccc--ceeeEEe
Q 004368 262 KAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK--ITRFVFYLDVSKPEELRVLTPRVV--GVDTAAS 337 (758)
Q Consensus 262 ~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~--~~~~l~~~d~~~~~~~~~l~~~~~--~~~~~~s 337 (758)
++++++ ... -.+.+.+-.+ ..+.++|-|.|...++.+... .+-..|-+...... +..+..-.. --..+|+
T Consensus 428 eIfrir--eKd-Ipve~velke--~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~-~~lVk~~dk~~~N~vfws 501 (698)
T KOG2314|consen 428 EIFRIR--EKD-IPVEVVELKE--SVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK-PSLVKELDKKFANTVFWS 501 (698)
T ss_pred EEEEee--ccC-CCceeeecch--heeeeeeccCCCeEEEEEccccccceeEEEeecCCCc-hhhhhhhcccccceEEEc
Confidence 333332 221 1122222222 345678999887766655443 33455655543333 333322111 1234599
Q ss_pred ecCCEEEEEEcCCCCCCcEEEEEeCC
Q 004368 338 HRGNHFFITRRSDELFNSELLACPVD 363 (758)
Q Consensus 338 ~dg~~l~~~s~~~~~~~~~L~~~~~~ 363 (758)
|.|+++++.+-.. .++.|..+|.+
T Consensus 502 PkG~fvvva~l~s--~~g~l~F~D~~ 525 (698)
T KOG2314|consen 502 PKGRFVVVAALVS--RRGDLEFYDTD 525 (698)
T ss_pred CCCcEEEEEEecc--cccceEEEecc
Confidence 9999887765543 35778888865
No 269
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=96.75 E-value=0.3 Score=51.92 Aligned_cols=151 Identities=11% Similarity=0.081 Sum_probs=86.2
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc-ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP-LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
-.+....|+-||..||+..- ...++||+..++....+. -.+-+.++.|+.+| .|+-...|. ...+++.
T Consensus 236 kdVT~L~Wn~~G~~LatG~~-----~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~-----ttilwd~ 305 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSE-----DGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDG-----TTILWDA 305 (524)
T ss_pred CCcceEEecCCCCeEEEeec-----CcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCc-----cEEEEec
Confidence 45788899999999998664 347889998776554432 23335569999999 565433332 2455565
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE-EeecCCEEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITR 347 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s 347 (758)
-++ +....|+..... .+++.|-.+.++. .+.....-.||.++.+.+ ...+..+...+... |.|.|..|+-.+
T Consensus 306 ~~g--~~~q~f~~~s~~-~lDVdW~~~~~F~--ts~td~~i~V~kv~~~~P--~~t~~GH~g~V~alk~n~tg~LLaS~S 378 (524)
T KOG0273|consen 306 HTG--TVKQQFEFHSAP-ALDVDWQSNDEFA--TSSTDGCIHVCKVGEDRP--VKTFIGHHGEVNALKWNPTGSLLASCS 378 (524)
T ss_pred cCc--eEEEeeeeccCC-ccceEEecCceEe--ecCCCceEEEEEecCCCc--ceeeecccCceEEEEECCCCceEEEec
Confidence 444 233444433221 2356676655542 233333345666666553 44455444444443 888787554444
Q ss_pred cCCCCCCcEEEEEe
Q 004368 348 RSDELFNSELLACP 361 (758)
Q Consensus 348 ~~~~~~~~~L~~~~ 361 (758)
++. ..+|+-+.
T Consensus 379 dD~---TlkiWs~~ 389 (524)
T KOG0273|consen 379 DDG---TLKIWSMG 389 (524)
T ss_pred CCC---eeEeeecC
Confidence 332 46676654
No 270
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.74 E-value=0.0025 Score=44.11 Aligned_cols=29 Identities=24% Similarity=0.478 Sum_probs=21.5
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYV 221 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v 221 (758)
...+.|||||++|+|++++.+....+||+
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 45789999999999999998222577875
No 271
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.73 E-value=0.37 Score=50.30 Aligned_cols=201 Identities=17% Similarity=0.153 Sum_probs=101.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
...+++|.|||++.+.--.. ...+-|+|++.++.+.. .+++|..-+-|.+++ |+-.+.|. .+..+.|+..
T Consensus 97 ~~~~~ls~dgk~~~V~N~TP---a~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~-F~~lC~DG-----sl~~v~Ld~~ 167 (342)
T PF06433_consen 97 KNMFALSADGKFLYVQNFTP---ATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRG-FSMLCGDG-----SLLTVTLDAD 167 (342)
T ss_dssp GGGEEE-TTSSEEEEEEESS---SEEEEEEETTTTEEEEEEEGTSEEEEEEEETTE-EEEEETTS-----CEEEEEETST
T ss_pred ccceEEccCCcEEEEEccCC---CCeEEEEECCCCceeeeecCCCEEEEEecCCCc-eEEEecCC-----ceEEEEECCC
Confidence 35678999999986554332 26799999999998865 678885544454443 33333332 2444455433
Q ss_pred CCCcE---EEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-----ceEEeeccc--cc-----ee-eE
Q 004368 272 QSNDI---CLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-----ELRVLTPRV--VG-----VD-TA 335 (758)
Q Consensus 272 ~~~~~---~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-----~~~~l~~~~--~~-----~~-~~ 335 (758)
+.+.. .+|...+...+....++.++.+++|.+-+ ..||.+|+.+.. ++..++..+ .+ .+ ..
T Consensus 168 Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~---G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A 244 (342)
T PF06433_consen 168 GKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYE---GNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIA 244 (342)
T ss_dssp SSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTT---SEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EE
T ss_pred CCEeEeeccccCCCCcccccccceECCCCeEEEEecC---CEEEEEeccCCcccccCcccccCccccccCcCCcceeeee
Confidence 22111 13322222233355566665555554433 468888887765 111122111 11 12 22
Q ss_pred EeecCCEEEEEEcCCC-----CCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeC--CEEEEEEEeCCeeEEEEEEcC
Q 004368 336 ASHRGNHFFITRRSDE-----LFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 336 ~s~dg~~l~~~s~~~~-----~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+.+..++||++-+.+. .+...|+.+|+++..... -++-.. .+.++.++. +-+++... .+...+.+++..
T Consensus 245 ~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~-Ri~l~~--~~~Si~Vsqd~~P~L~~~~-~~~~~l~v~D~~ 320 (342)
T PF06433_consen 245 YHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVA-RIPLEH--PIDSIAVSQDDKPLLYALS-AGDGTLDVYDAA 320 (342)
T ss_dssp EETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEE-EEEEEE--EESEEEEESSSS-EEEEEE-TTTTEEEEEETT
T ss_pred eccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEE-EEeCCC--ccceEEEccCCCcEEEEEc-CCCCeEEEEeCc
Confidence 5566778888775431 245689999987632111 222111 233455544 33433333 233457788876
Q ss_pred C
Q 004368 409 A 409 (758)
Q Consensus 409 ~ 409 (758)
.
T Consensus 321 t 321 (342)
T PF06433_consen 321 T 321 (342)
T ss_dssp T
T ss_pred C
Confidence 4
No 272
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.72 E-value=0.04 Score=61.01 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=68.9
Q ss_pred CCCceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc-ceeEEEecCC-eE
Q 004368 172 APPEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-AL 249 (758)
Q Consensus 172 ~~~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~-~~~~~wspDg-~l 249 (758)
+.++++++|+|.+.. ++.+.+..-++|-|++++||.....|+++..|..+..+.|+.....+... .+.++|.+|+ .+
T Consensus 106 ~~e~~~~ld~~~~~d-d~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~v~~~~~~~~~~~~~~~g~ 184 (712)
T KOG2237|consen 106 EKEEEVFLDPNALGD-DGTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTVVIDVKFSGPVWTHDGKGV 184 (712)
T ss_pred hcccceecCCccCCC-CceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCccceeeeeeccCCceeeccCCce
Confidence 357899999999985 67889999999999999999999999998888888888777766545444 6779999999 78
Q ss_pred EEEEeC
Q 004368 250 VYITMD 255 (758)
Q Consensus 250 ~y~~~~ 255 (758)
+|.+..
T Consensus 185 ~y~~w~ 190 (712)
T KOG2237|consen 185 SYLAWA 190 (712)
T ss_pred Eeeeec
Confidence 777654
No 273
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=96.71 E-value=0.096 Score=56.80 Aligned_cols=141 Identities=12% Similarity=0.141 Sum_probs=83.3
Q ss_pred eEEECCCCCEEEEEE----eCCCC---eEEEEEEEECCCCcee-eccccCcceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 195 CFQVSPDNKLVAYAE----DTKGD---EIYTVYVIDIETGTPV-GKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~----~~~G~---e~~~l~v~dl~~g~~~-~~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
.+.|.+-|.-|.... |..|. ...+||.++.++.... ++.-.+-+..+.|+|+| .|..+-. -.|..+-+
T Consensus 222 qm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyG---fMPAkvti 298 (566)
T KOG2315|consen 222 QMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGREFAVVYG---FMPAKVTI 298 (566)
T ss_pred EEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCEEEEEEe---cccceEEE
Confidence 457888888776653 33221 1368999999843332 22323446679999999 5544432 23556777
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecC--CcceEEEEEeCCCCCceEEeec-cccceee-EEeecCC
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASES--KITRFVFYLDVSKPEELRVLTP-RVVGVDT-AASHRGN 341 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~--~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~-~~s~dg~ 341 (758)
+++... .+..+.+. ++. .+-|+|-|++|++..-. .+..++| |+.+.+ .+.. ...+..+ .|+|||+
T Consensus 299 fnlr~~---~v~df~eg-pRN--~~~fnp~g~ii~lAGFGNL~G~mEvw--Dv~n~K---~i~~~~a~~tt~~eW~PdGe 367 (566)
T KOG2315|consen 299 FNLRGK---PVFDFPEG-PRN--TAFFNPHGNIILLAGFGNLPGDMEVW--DVPNRK---LIAKFKAANTTVFEWSPDGE 367 (566)
T ss_pred EcCCCC---EeEeCCCC-Ccc--ceEECCCCCEEEEeecCCCCCceEEE--eccchh---hccccccCCceEEEEcCCCc
Confidence 777644 22233322 221 34589999999987633 4555555 655533 2222 2223333 4999999
Q ss_pred EEEEEEcC
Q 004368 342 HFFITRRS 349 (758)
Q Consensus 342 ~l~~~s~~ 349 (758)
+|+-.|..
T Consensus 368 ~flTATTa 375 (566)
T KOG2315|consen 368 YFLTATTA 375 (566)
T ss_pred EEEEEecc
Confidence 88877664
No 274
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.70 E-value=0.05 Score=59.57 Aligned_cols=153 Identities=14% Similarity=0.056 Sum_probs=94.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
.+-+.+||+||+++| .|+-...++|||..+.++... .-...+-.++|+|=- .|+.+.....++ .+.+++.
T Consensus 303 eVCgLkws~d~~~lA-----SGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~--~i~fwn~ 375 (484)
T KOG0305|consen 303 EVCGLKWSPDGNQLA-----SGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR--CIKFWNT 375 (484)
T ss_pred eeeeeEECCCCCeec-----cCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCccc--EEEEEEc
Confidence 567889999999998 444467899999855444331 223345568999976 676666543333 4666666
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCC-cceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFIT 346 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~ 346 (758)
-++.. +-.-.......++.|++..+-|+.+.... +.-.||.++. .+....+..+..-+.+ .++|||..++..
T Consensus 376 ~~g~~----i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps--~~~~~~l~gH~~RVl~la~SPdg~~i~t~ 449 (484)
T KOG0305|consen 376 NTGAR----IDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPS--MKLVAELLGHTSRVLYLALSPDGETIVTG 449 (484)
T ss_pred CCCcE----ecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccc--cceeeeecCCcceeEEEEECCCCCEEEEe
Confidence 65532 21112233456889999998887655432 2235555543 3324445544443444 399999988877
Q ss_pred EcCCCCCCcEEEEE
Q 004368 347 RRSDELFNSELLAC 360 (758)
Q Consensus 347 s~~~~~~~~~L~~~ 360 (758)
+.++ +.+++.+
T Consensus 450 a~DE---Tlrfw~~ 460 (484)
T KOG0305|consen 450 AADE---TLRFWNL 460 (484)
T ss_pred cccC---cEEeccc
Confidence 6654 5666654
No 275
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=96.68 E-value=0.21 Score=56.67 Aligned_cols=148 Identities=12% Similarity=0.176 Sum_probs=73.2
Q ss_pred eEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcC-CCcEEEEEecCCcceEEEEEeCCC
Q 004368 240 SVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSK 318 (758)
Q Consensus 240 ~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~-Dg~~l~~~s~~~~~~~l~~~d~~~ 318 (758)
.+.||.++.|+=.+.|.+ |.+++++.. +=..+|.. ..|...+++.| |.+|+ ++..-...-+||- +.+
T Consensus 374 DlSWSKn~fLLSSSMDKT-----VRLWh~~~~--~CL~~F~H--ndfVTcVaFnPvDDryF-iSGSLD~KvRiWs--I~d 441 (712)
T KOG0283|consen 374 DLSWSKNNFLLSSSMDKT-----VRLWHPGRK--ECLKVFSH--NDFVTCVAFNPVDDRYF-ISGSLDGKVRLWS--ISD 441 (712)
T ss_pred ecccccCCeeEecccccc-----EEeecCCCc--ceeeEEec--CCeeEEEEecccCCCcE-eecccccceEEee--cCc
Confidence 367888876655555543 666677765 34556654 45777788999 66664 3333334445554 333
Q ss_pred CCceEEeeccccceee-EEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc-ceeeecCC-----CCceeeeEEEeC---C
Q 004368 319 PEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSE-TTVLIPHR-----ESVKLQDIQLFI---D 388 (758)
Q Consensus 319 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~-~~~l~~~~-----~~~~~~~~~~~~---~ 388 (758)
.+ +.--+.-.+-+.. -+.|||+..++-+-.+ .-++| +..+..- ..+.|... ....+.++..+. +
T Consensus 442 ~~-Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G---~C~fY--~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~ 515 (712)
T KOG0283|consen 442 KK-VVDWNDLRDLITAVCYSPDGKGAVIGTFNG---YCRFY--DTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPD 515 (712)
T ss_pred Ce-eEeehhhhhhheeEEeccCCceEEEEEecc---EEEEE--EccCCeEEEeeeEeeccCccccCceeeeeEecCCCCC
Confidence 32 1111111111222 2789988666655432 22333 3222100 11111111 112577777663 3
Q ss_pred EEEEEEEeCCeeEEEEEEcC
Q 004368 389 HLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 389 ~l~~~~~~~g~~~l~v~~l~ 408 (758)
.++++ ..| ++|+||++.
T Consensus 516 ~vLVT-SnD--SrIRI~d~~ 532 (712)
T KOG0283|consen 516 EVLVT-SND--SRIRIYDGR 532 (712)
T ss_pred eEEEe-cCC--CceEEEecc
Confidence 34444 434 468899874
No 276
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=96.68 E-value=0.23 Score=48.56 Aligned_cols=176 Identities=12% Similarity=0.112 Sum_probs=103.1
Q ss_pred EEEEEEEECCCCceeec-c-ccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEc
Q 004368 216 IYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQAS 293 (758)
Q Consensus 216 ~~~l~v~dl~~g~~~~~-~-~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S 293 (758)
.-+|++|.+.+|.=... . .+.-...++-+||++.+.... ...|.++++.+.....+..|+..... ...+.|.
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-----~qhvRlyD~~S~np~Pv~t~e~h~kN-VtaVgF~ 92 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG-----NQHVRLYDLNSNNPNPVATFEGHTKN-VTAVGFQ 92 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc-----CCeeEEEEccCCCCCceeEEeccCCc-eEEEEEe
Confidence 46899999999975542 1 122356688999994333322 23588889988866667777665433 3467889
Q ss_pred CCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE-EeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeee
Q 004368 294 ESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLI 372 (758)
Q Consensus 294 ~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~ 372 (758)
-||||++- .++.++-+|| |+.... .+++......+... ..|+...|+. .+. ++.|.+.|+....-...++
T Consensus 93 ~dgrWMyT-gseDgt~kIW--dlR~~~-~qR~~~~~spVn~vvlhpnQteLis-~dq----sg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 93 CDGRWMYT-GSEDGTVKIW--DLRSLS-CQRNYQHNSPVNTVVLHPNQTELIS-GDQ----SGNIRVWDLGENSCTHELI 163 (311)
T ss_pred ecCeEEEe-cCCCceEEEE--eccCcc-cchhccCCCCcceEEecCCcceEEe-ecC----CCcEEEEEccCCccccccC
Confidence 99999764 4555566666 444443 33332222222222 4455554443 333 3568888886532344477
Q ss_pred cCCCCceeeeEEEeCCEEEEE-EEeCCeeEEEEEEcCC
Q 004368 373 PHRESVKLQDIQLFIDHLAVY-EREGGLQKITTYRLPA 409 (758)
Q Consensus 373 ~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~l~v~~l~~ 409 (758)
|+. +..+.++.+..+.-.+. .+..| ..++|++-.
T Consensus 164 Pe~-~~~i~sl~v~~dgsml~a~nnkG--~cyvW~l~~ 198 (311)
T KOG0315|consen 164 PED-DTSIQSLTVMPDGSMLAAANNKG--NCYVWRLLN 198 (311)
T ss_pred CCC-CcceeeEEEcCCCcEEEEecCCc--cEEEEEccC
Confidence 765 45677777665543333 33334 477888863
No 277
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.64 E-value=0.0021 Score=68.06 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=59.8
Q ss_pred CCCCCEEEEecCCCccCCCCCCCh-HHHHHHHc---CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHH
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDR---GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~---G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (758)
+.+.|++|++||-.+......+.. ....++.+ .+.|+++|...+... .+..+.... ...-..+...+..|..
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n~--~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVANT--RLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhhH--HHHHHHHHHHHHHHHh
Confidence 456899999999544442333333 33445554 899999998543221 111111100 0111234445677775
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhhCCC--ceeEEEEc
Q 004368 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAA 626 (758)
Q Consensus 589 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~ 626 (758)
...+++++|-++|||.|+++++.+..+... .+..+...
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgL 183 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGL 183 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEE
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEec
Confidence 556789999999999999999999988655 44444443
No 278
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=96.62 E-value=0.23 Score=52.73 Aligned_cols=226 Identities=16% Similarity=0.120 Sum_probs=118.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcc-eeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVT-ASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~-~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
.+-+++|+.+|.||+- |+-..++.+||..+|+..+. ++.... -.+.|-.+..|+-...+. .++..+++
T Consensus 278 PI~slKWnk~G~yilS-----~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~-----~i~V~kv~ 347 (524)
T KOG0273|consen 278 PIFSLKWNKKGTYILS-----GGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDG-----CIHVCKVG 347 (524)
T ss_pred ceEEEEEcCCCCEEEe-----ccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCc-----eEEEEEec
Confidence 4667899999999973 33345788999999988763 333322 347897666665443322 25666666
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCE------
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNH------ 342 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~------ 342 (758)
.+ .++..+...+.. ...+.|.|-|.-|+ +.++..+-.||-+.-+. ....+......+. ..|+|+|.-
T Consensus 348 ~~--~P~~t~~GH~g~-V~alk~n~tg~LLa-S~SdD~TlkiWs~~~~~--~~~~l~~Hskei~t~~wsp~g~v~~n~~~ 421 (524)
T KOG0273|consen 348 ED--RPVKTFIGHHGE-VNALKWNPTGSLLA-SCSDDGTLKIWSMGQSN--SVHDLQAHSKEIYTIKWSPTGPVTSNPNM 421 (524)
T ss_pred CC--CcceeeecccCc-eEEEEECCCCceEE-EecCCCeeEeeecCCCc--chhhhhhhccceeeEeecCCCCccCCCcC
Confidence 55 334444443333 23577999887554 55556667777653322 1222322222222 237776641
Q ss_pred -EEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCc
Q 004368 343 -FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGK 421 (758)
Q Consensus 343 -l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~ 421 (758)
+.+++.. .+.-|..+|+..+.....+..+++.+.-..+++++.+++ ....+|. +.+++... ++.. +
T Consensus 422 ~~~l~sas---~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylA-sGs~dg~--V~iws~~~-~~l~------~ 488 (524)
T KOG0273|consen 422 NLMLASAS---FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLA-SGSLDGC--VHIWSTKT-GKLV------K 488 (524)
T ss_pred CceEEEee---cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEE-ecCCCCe--eEeccccc-hhee------E
Confidence 1111111 123455556654322223556666655555555565654 3344443 56666553 2211 1
Q ss_pred eeeccCcccccCCCCcccCCcEEEEEEe
Q 004368 422 SVEFIDPVYSIDPSESVFSSRILRFHYS 449 (758)
Q Consensus 422 ~i~~p~~~~~i~~~~~~~d~~~l~~~~s 449 (758)
.. .+. ..|..+.++.+++.+...++
T Consensus 489 s~--~~~-~~Ifel~Wn~~G~kl~~~~s 513 (524)
T KOG0273|consen 489 SY--QGT-GGIFELCWNAAGDKLGACAS 513 (524)
T ss_pred ee--cCC-CeEEEEEEcCCCCEEEEEec
Confidence 11 111 12334556777777766654
No 279
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=96.62 E-value=0.0075 Score=60.32 Aligned_cols=105 Identities=19% Similarity=0.269 Sum_probs=63.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecccc----CcceeEEEecCC-eEEEEEeCCCCCCceEEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV----GVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~----~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~ 267 (758)
+-.+.+|.|...|| .|+-...|.||.+.+|.-++ .++ .....+.||.|+ +++-.+.|. .+.+|-
T Consensus 266 Vlci~FSRDsEMlA-----sGsqDGkIKvWri~tG~ClR-rFdrAHtkGvt~l~FSrD~SqiLS~sfD~-----tvRiHG 334 (508)
T KOG0275|consen 266 VLCISFSRDSEMLA-----SGSQDGKIKVWRIETGQCLR-RFDRAHTKGVTCLSFSRDNSQILSASFDQ-----TVRIHG 334 (508)
T ss_pred eEEEeecccHHHhh-----ccCcCCcEEEEEEecchHHH-HhhhhhccCeeEEEEccCcchhhcccccc-----eEEEec
Confidence 34557788888777 35445679999999998654 221 124568999999 776555543 367777
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEE
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVF 312 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~ 312 (758)
+.++. -..-|.+ ...+.-...+++||.+|+-.+ +.++-.+|
T Consensus 335 lKSGK--~LKEfrG-HsSyvn~a~ft~dG~~iisaS-sDgtvkvW 375 (508)
T KOG0275|consen 335 LKSGK--CLKEFRG-HSSYVNEATFTDDGHHIISAS-SDGTVKVW 375 (508)
T ss_pred cccch--hHHHhcC-ccccccceEEcCCCCeEEEec-CCccEEEe
Confidence 77662 1112222 233444566889998876443 33333333
No 280
>COG3150 Predicted esterase [General function prediction only]
Probab=96.57 E-value=0.051 Score=49.95 Aligned_cols=126 Identities=18% Similarity=0.175 Sum_probs=65.7
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEc---CCccchhhccCCCCCCCChhhhhccCC
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAA---VPFVDVLTTMLDPTIPLTTAEWEEWGD 653 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~---~~~~d~~~~~~~~~~~~~~~~~~e~g~ 653 (758)
....+-++-++.+.. | ..++|+|.|.|||.+-++..++- +++++.. .|.-++..+...+..|.+..+|. -.
T Consensus 43 ~~a~~ele~~i~~~~-~-~~p~ivGssLGGY~At~l~~~~G--irav~~NPav~P~e~l~gylg~~en~ytg~~y~--le 116 (191)
T COG3150 43 QQALKELEKAVQELG-D-ESPLIVGSSLGGYYATWLGFLCG--IRAVVFNPAVRPYELLTGYLGRPENPYTGQEYV--LE 116 (191)
T ss_pred HHHHHHHHHHHHHcC-C-CCceEEeecchHHHHHHHHHHhC--ChhhhcCCCcCchhhhhhhcCCCCCCCCcceEE--ee
Confidence 445555555555532 2 33999999999999999998763 4554432 23333333333334444433321 00
Q ss_pred CCCHHHHHHHHhcCcccccCCCCCCeEEEeccCC-CCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 654 PWKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN-DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 654 p~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~-D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
+ .....+. ..++...+-|..|++-... |....+.++..++.... .++.. ++.|.+
T Consensus 117 ~---~hI~~l~----~~~~~~l~~p~~~~lL~qtgDEvLDyr~a~a~y~~~~-------~~V~d---gg~H~F 172 (191)
T COG3150 117 S---RHIATLC----VLQFRELNRPRCLVLLSQTGDEVLDYRQAVAYYHPCY-------EIVWD---GGDHKF 172 (191)
T ss_pred h---hhHHHHH----HhhccccCCCcEEEeecccccHHHHHHHHHHHhhhhh-------heeec---CCCccc
Confidence 1 1111111 1234445556555555555 87776665555554432 23343 777865
No 281
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.54 E-value=0.052 Score=53.40 Aligned_cols=206 Identities=21% Similarity=0.182 Sum_probs=109.1
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcC-----cEEEEEecCCCCCCchhHHhcc-------cccCCcChHhH----
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRG-----FIFAIAQIRGGGELGRQWYENG-------KFLKKKNTFTD---- 578 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G-----~~v~~~~~RG~g~~G~~~~~~~-------~~~~~~~~~~D---- 578 (758)
..|+| |+||.-|... ++......++.+| -.++.++.-|+-..-....... -...+.++..|
T Consensus 45 ~iPTI-fIhGsgG~as--S~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPTI-FIHGSGGTAS--SLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccceE-EEecCCCChh--HHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 46754 5788555433 2455566666655 5577777777532211111100 01222333334
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC------CCceeEEEEcCCccchhhccCCCCCCCChhhhhccC
Q 004368 579 FIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR------PDLFKAAVAAVPFVDVLTTMLDPTIPLTTAEWEEWG 652 (758)
Q Consensus 579 ~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~~~e~g 652 (758)
+..++.+|.++..+ .++-++||||||......+..+ |.+=+-+.+.+||- .-....+++. + ++.-=|
T Consensus 122 lk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN-~~~l~~de~v--~--~v~~~~ 194 (288)
T COG4814 122 LKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN-VGNLVPDETV--T--DVLKDG 194 (288)
T ss_pred HHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc-ccccCCCcch--h--eeeccC
Confidence 45578899988765 7899999999999777766653 54555566666654 1111111111 1 110012
Q ss_pred CC-CCHHHHHHHHhcCcccccCCCCCCeEEEeccCC------CCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 653 DP-WKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLN------DPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 653 ~p-~~~~~~~~l~~~sp~~~i~~~~~P~~Li~~G~~------D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
.+ ....+++++... +..+.+ +. -+|++.|+- |-.||...+.-.+.-+..++....--+++. +++-|.-
T Consensus 195 ~~~~~t~y~~y~~~n--~k~v~~-~~-evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~G-k~a~Hs~ 269 (288)
T COG4814 195 PGLIKTPYYDYIAKN--YKKVSP-NT-EVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKG-KDARHSK 269 (288)
T ss_pred ccccCcHHHHHHHhc--ceeCCC-Cc-EEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeC-Ccchhhc
Confidence 21 122234444321 111111 33 388888975 457888888877777776665544445542 3578865
Q ss_pred CCChHHHHHH
Q 004368 726 KSGRFERLRE 735 (758)
Q Consensus 726 ~~~~~~~~~~ 735 (758)
........+.
T Consensus 270 lhen~~v~~y 279 (288)
T COG4814 270 LHENPTVAKY 279 (288)
T ss_pred cCCChhHHHH
Confidence 4444444433
No 282
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.53 E-value=0.26 Score=50.19 Aligned_cols=151 Identities=19% Similarity=0.293 Sum_probs=82.8
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCC--eE--EEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceE
Q 004368 189 GFYSVGCFQVSPDNKLVAYAEDTKGD--EI--YTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKA 263 (758)
Q Consensus 189 ~~~~i~~~~~SPDG~~lAy~~~~~G~--e~--~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v 263 (758)
.........+.|||+ |-++...... .. ..|+.++.+ ++.... .--....+++|+||++.+|+.... ..+|
T Consensus 84 ~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~---~~~i 158 (246)
T PF08450_consen 84 PFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSF---NGRI 158 (246)
T ss_dssp CTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETT---TTEE
T ss_pred ccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccc---ccee
Confidence 467788999999999 4444432211 11 679999988 655432 112235679999999544554322 2358
Q ss_pred EEEEcCCCCC--CcEEEeee-cCC-ceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEE-e
Q 004368 264 WLHKLEADQS--NDICLYHE-KDD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAA-S 337 (758)
Q Consensus 264 ~~~~l~~~~~--~~~~v~~~-~~~-~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~-s 337 (758)
+++++..... ....++.. ... ..--++.+..+|+ |++... ....|++++.+ ++....+.-.... ....| .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~--~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg 234 (246)
T PF08450_consen 159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW--GGGRIVVFDPD-GKLLREIELPVPRPTNCAFGG 234 (246)
T ss_dssp EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE--TTTEEEEEETT-SCEEEEEE-SSSSEEEEEEES
T ss_pred EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc--CCCEEEEECCC-ccEEEEEcCCCCCEEEEEEEC
Confidence 8888864322 12223322 222 2344677888986 444333 44678999987 4413323222122 22235 4
Q ss_pred ecCCEEEEEEc
Q 004368 338 HRGNHFFITRR 348 (758)
Q Consensus 338 ~dg~~l~~~s~ 348 (758)
++.+.||+.+.
T Consensus 235 ~~~~~L~vTta 245 (246)
T PF08450_consen 235 PDGKTLYVTTA 245 (246)
T ss_dssp TTSSEEEEEEB
T ss_pred CCCCEEEEEeC
Confidence 67788888764
No 283
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.53 E-value=0.75 Score=55.59 Aligned_cols=191 Identities=15% Similarity=0.114 Sum_probs=98.9
Q ss_pred EeeEEECCC-CCEEEEEEeCCCCeEEEEEEEECCCCceeecc--ccCcceeEEEec-CCeEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPD-NKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAG-NEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPD-G~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~~~~~~wsp-Dg~l~y~~~~~~~~~~~v~~~~l 268 (758)
+..+.|+|. +++||- ...+ ..|++||+.+++.+... -.+.+..++|+| |+.++.+...+. .|.++++
T Consensus 535 v~~l~~~~~~~~~las-~~~D----g~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg----~v~iWd~ 605 (793)
T PLN00181 535 LSGICWNSYIKSQVAS-SNFE----GVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG----SVKLWSI 605 (793)
T ss_pred eeeEEeccCCCCEEEE-EeCC----CeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCC----EEEEEEC
Confidence 456778775 566553 3333 47999999988765421 122356689997 566656654332 4777788
Q ss_pred CCCCCCcEEEeeecCCceeeEEEE-cCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccceeeE-EeecCCEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQA-SESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTA-ASHRGNHFFI 345 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~-S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~-~s~dg~~l~~ 345 (758)
.++. ....+... .....+.| +++|.+|+..+.+ ..|+++|+.+.. ....+......+... |. ++..|+.
T Consensus 606 ~~~~--~~~~~~~~--~~v~~v~~~~~~g~~latgs~d---g~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs 677 (793)
T PLN00181 606 NQGV--SIGTIKTK--ANICCVQFPSESGRSLAFGSAD---HKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVS 677 (793)
T ss_pred CCCc--EEEEEecC--CCeEEEEEeCCCCCEEEEEeCC---CeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEE
Confidence 7652 22233222 12335566 4578887765433 367888887654 233333333333333 54 6666554
Q ss_pred EEcCCCCCCcEEEEEeCCCCC-----c-ceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 346 TRRSDELFNSELLACPVDNTS-----E-TTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~~~-----~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
.+.+ ..|..+|+.... . ...+..+........+++.+. ++++...++. +.+|+..
T Consensus 678 ~s~D-----~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~-~lasgs~D~~--v~iw~~~ 738 (793)
T PLN00181 678 SSTD-----NTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDG-YIATGSETNE--VFVYHKA 738 (793)
T ss_pred EECC-----CEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCC-EEEEEeCCCE--EEEEECC
Confidence 4432 235555554210 0 111222222222233444444 3445555654 6677654
No 284
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.52 E-value=0.0096 Score=62.32 Aligned_cols=130 Identities=21% Similarity=0.322 Sum_probs=82.6
Q ss_pred eEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCCh---HHHHHHH-cCcEEEEEecCCCCC---CchhHHhccc-
Q 004368 497 TQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---SRLSLLD-RGFIFAIAQIRGGGE---LGRQWYENGK- 568 (758)
Q Consensus 497 ~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~---~~~~l~~-~G~~v~~~~~RG~g~---~G~~~~~~~~- 568 (758)
.+.+..++....+ -..+..|.++|. | -..... .|.. .+.-++. .+-.++.+..|--|+ +|.+-+....
T Consensus 63 ~tF~qRylin~~f-w~~g~gPIffYt-G-NEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~h 138 (492)
T KOG2183|consen 63 KTFDQRYLINDDF-WKKGEGPIFFYT-G-NEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARH 138 (492)
T ss_pred cceeeEEEEeccc-ccCCCCceEEEe-C-CcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhh
Confidence 3444444555444 233446776664 3 122211 1211 1233333 588899999996665 3444222111
Q ss_pred --ccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEE-EcCCcc
Q 004368 569 --FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAV-AAVPFV 630 (758)
Q Consensus 569 --~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v-~~~~~~ 630 (758)
...-++...|+...+.+|...-......|.++|+||||+|+++.=.++|++..+++ +.+|++
T Consensus 139 lgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 139 LGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred hccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 12335778999999999988866777899999999999999999999999876555 445654
No 285
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=96.51 E-value=0.077 Score=56.54 Aligned_cols=189 Identities=14% Similarity=0.136 Sum_probs=105.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cc----cCcceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL----VGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~----~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
.+.+..++|||+.|.. |+|..+|-||||+....+-. .+ ..+.. ++-|||.++.|....+++ |.++
T Consensus 467 yiRSckL~pdgrtLiv-----GGeastlsiWDLAapTprikaeltssapaCyA-La~spDakvcFsccsdGn----I~vw 536 (705)
T KOG0639|consen 467 YIRSCKLLPDGRTLIV-----GGEASTLSIWDLAAPTPRIKAELTSSAPACYA-LAISPDAKVCFSCCSDGN----IAVW 536 (705)
T ss_pred ceeeeEecCCCceEEe-----ccccceeeeeeccCCCcchhhhcCCcchhhhh-hhcCCccceeeeeccCCc----EEEE
Confidence 4678899999999874 66788999999998765422 22 22333 788999988888775542 6666
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc---eeeEEeecCCEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG---VDTAASHRGNHF 343 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~---~~~~~s~dg~~l 343 (758)
+|-.. ..+..|...... ...+..|+||..|.- ..-. +-|.-+|+..+. .+....-. +.....|.|+|+
T Consensus 537 DLhnq--~~VrqfqGhtDG-ascIdis~dGtklWT-GGlD--ntvRcWDlregr---qlqqhdF~SQIfSLg~cP~~dWl 607 (705)
T KOG0639|consen 537 DLHNQ--TLVRQFQGHTDG-ASCIDISKDGTKLWT-GGLD--NTVRCWDLREGR---QLQQHDFSSQIFSLGYCPTGDWL 607 (705)
T ss_pred Ecccc--eeeecccCCCCC-ceeEEecCCCceeec-CCCc--cceeehhhhhhh---hhhhhhhhhhheecccCCCccce
Confidence 77533 223334332221 124567899988753 2212 334455776543 22211111 112256889988
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 344 FITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
++-- .+..+.+....++. .-.+.-++.-+....|+..+++.+-+..+|- +-+|+.+
T Consensus 608 avGM-----ens~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfvStGkDnl---LnawrtP 663 (705)
T KOG0639|consen 608 AVGM-----ENSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNL---LNAWRTP 663 (705)
T ss_pred eeec-----ccCcEEEEecCCcc-ceeecccccEEEEEEecccCceeeecCchhh---hhhccCc
Confidence 7653 23455555554432 2223333322223346667777765555443 3455554
No 286
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.48 E-value=0.0086 Score=59.19 Aligned_cols=89 Identities=13% Similarity=0.097 Sum_probs=50.0
Q ss_pred EEEecCCCccCCCCCCChHHHHHHHcCcE---EEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 519 LLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 519 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
||++||-. ......|......|.++||. ++..++-..... ....... .......++.+.++.+.+. +-.
T Consensus 4 VVlVHG~~-~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~--~~~~~~~--~~~~~~~~l~~fI~~Vl~~--TGa- 75 (219)
T PF01674_consen 4 VVLVHGTG-GNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGS--PSVQNAH--MSCESAKQLRAFIDAVLAY--TGA- 75 (219)
T ss_dssp EEEE--TT-TTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHH--THHHHHH--B-HHHHHHHHHHHHHHHHH--HT--
T ss_pred EEEECCCC-cchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCC--Ccccccc--cchhhHHHHHHHHHHHHHh--hCC-
Confidence 56689944 33455688899999999999 788888433321 1111111 1122335566666655543 456
Q ss_pred cEEEEEeChhHHHHHHHHhh
Q 004368 596 KLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~ 615 (758)
+|=|+|||+||.++-+++..
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999998877754
No 287
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.38 E-value=0.021 Score=57.18 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=54.6
Q ss_pred CEEEEecCCCccCCCCCCChHHHHH--------HHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHH
Q 004368 517 PLLLYGYGSYEICNDPAFNSSRLSL--------LDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l--------~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (758)
..|||+||..|+.. .+......+ ....+.++..|+..... .++ |.... ...+-+..+++++.+
T Consensus 5 ~pVlFIhG~~Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s---~~~--g~~l~--~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 5 IPVLFIHGNAGSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELS---AFH--GRTLQ--RQAEFLAEAIKYILE 75 (225)
T ss_pred CEEEEECcCCCCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCcccc---ccc--cccHH--HHHHHHHHHHHHHHH
Confidence 56889999444321 111111111 11257788888764221 111 01111 112334456666655
Q ss_pred cC---CCCCCcEEEEEeChhHHHHHHHHhhCC---CceeEEEE
Q 004368 589 NC---YCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVA 625 (758)
Q Consensus 589 ~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~ 625 (758)
.. ...+++|.++||||||.++-.++...+ +.++.+|.
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iit 118 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIIT 118 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEE
Confidence 43 467899999999999998887776543 34555554
No 288
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.37 E-value=0.42 Score=48.32 Aligned_cols=130 Identities=9% Similarity=0.027 Sum_probs=85.0
Q ss_pred eEEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccC---CCC-CCChHHHHHHHcCcEEEEEecCCCCCCch
Q 004368 486 TERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEIC---NDP-AFNSSRLSLLDRGFIFAIAQIRGGGELGR 561 (758)
Q Consensus 486 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~---~~~-~~~~~~~~l~~~G~~v~~~~~RG~g~~G~ 561 (758)
+++..+.+.-|. |++.+.- ++.++.|+||..|.-.-.. ... .+.+.++.++++ +.+.-++.+|+-+--.
T Consensus 22 ~~e~~V~T~~G~-v~V~V~G-----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp 94 (326)
T KOG2931|consen 22 CQEHDVETAHGV-VHVTVYG-----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAP 94 (326)
T ss_pred ceeeeecccccc-EEEEEec-----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCc
Confidence 344445555564 6665432 2334678999999731111 111 123556788888 9999999998754212
Q ss_pred hHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCC
Q 004368 562 QWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVP 628 (758)
Q Consensus 562 ~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~ 628 (758)
.+. ...-..+.+|+.+-+..+.+.- .-+-|..+|--+|+++-...|..+|+++-+.|+.++
T Consensus 95 ~~p----~~y~yPsmd~LAd~l~~VL~~f--~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~ 155 (326)
T KOG2931|consen 95 SFP----EGYPYPSMDDLADMLPEVLDHF--GLKSVIGMGVGAGAYILARFALNHPERVLGLVLINC 155 (326)
T ss_pred cCC----CCCCCCCHHHHHHHHHHHHHhc--CcceEEEecccccHHHHHHHHhcChhheeEEEEEec
Confidence 111 1222456777777776666543 347899999999999999999999999999998764
No 289
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.34 E-value=0.014 Score=63.65 Aligned_cols=134 Identities=13% Similarity=0.126 Sum_probs=76.5
Q ss_pred EEEEEEEECCCCceeecc--ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCC--ceeeEE
Q 004368 216 IYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDD--IYSLGL 290 (758)
Q Consensus 216 ~~~l~v~dl~~g~~~~~~--~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~--~~~~~~ 290 (758)
..+|.+|||.+++....- -.+.+.+++||||| .++-+..|. .|+.|+-.+. ...+++.+.+ .....+
T Consensus 699 d~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg-----~~rVy~Prs~---e~pv~Eg~gpvgtRgARi 770 (1012)
T KOG1445|consen 699 DSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDG-----TLRVYEPRSR---EQPVYEGKGPVGTRGARI 770 (1012)
T ss_pred cceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCc-----eEEEeCCCCC---CCccccCCCCccCcceeE
Confidence 578999999998765321 12224559999999 677776654 3666665544 3346655432 223356
Q ss_pred EEcCCCcEEEEEecCC-cceEEEEEeCCCCCceEEeeccccce-----eeEEeecCCEEEEEEcCCCCCCcEEEEEeC
Q 004368 291 QASESKKFLFIASESK-ITRFVFYLDVSKPEELRVLTPRVVGV-----DTAASHRGNHFFITRRSDELFNSELLACPV 362 (758)
Q Consensus 291 ~~S~Dg~~l~~~s~~~-~~~~l~~~d~~~~~~~~~l~~~~~~~-----~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~ 362 (758)
.|.=||++|++..-++ ..++|-++|..+-. ...|....-++ ....+.|.. ++|++..+ ...++.+.+
T Consensus 771 ~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~-~~pl~t~~lDvaps~LvP~YD~Ds~-~lfltGKG---D~~v~~yEv 843 (1012)
T KOG1445|consen 771 LWACDGRIVIVVGFDKSSERQVQMYDAQTLD-LRPLYTQVLDVAPSPLVPHYDYDSN-VLFLTGKG---DRFVNMYEV 843 (1012)
T ss_pred EEEecCcEEEEecccccchhhhhhhhhhhcc-CCcceeeeecccCccccccccCCCc-eEEEecCC---CceEEEEEe
Confidence 7889999998876443 23556666665433 22221111111 122455655 56666665 245655554
No 290
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.31 E-value=0.75 Score=50.16 Aligned_cols=200 Identities=13% Similarity=0.092 Sum_probs=112.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
-....++++|+++. ..... ...+.++|.++.+.... .......+++++||++.+|+..... ....+...+-.+.
T Consensus 76 p~~i~v~~~~~~vy-v~~~~---~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~-~~~~vsvid~~t~ 150 (381)
T COG3391 76 PAGVAVNPAGNKVY-VTTGD---SNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGN-GNNTVSVIDAATN 150 (381)
T ss_pred ccceeeCCCCCeEE-EecCC---CCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEeccc-CCceEEEEeCCCC
Confidence 34668899999764 33322 24789999877666543 2222445689999995555554321 3345666665554
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEE------eeccccceeeEEeecCCEEEE
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV------LTPRVVGVDTAASHRGNHFFI 345 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~------l~~~~~~~~~~~s~dg~~l~~ 345 (758)
... ..+.....+ .++.++|||..+++.. ...+.|.++|..+.. ... +.....-....++++|..+|+
T Consensus 151 ~~~-~~~~vG~~P---~~~a~~p~g~~vyv~~--~~~~~v~vi~~~~~~-v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV 223 (381)
T COG3391 151 KVT-ATIPVGNTP---TGVAVDPDGNKVYVTN--SDDNTVSVIDTSGNS-VVRGSVGSLVGVGTGPAGIAVDPDGNRVYV 223 (381)
T ss_pred eEE-EEEecCCCc---ceEEECCCCCeEEEEe--cCCCeEEEEeCCCcc-eeccccccccccCCCCceEEECCCCCEEEE
Confidence 221 113222223 4678999999988765 455778999976654 332 111111123348999998887
Q ss_pred EEcCCCCCCcEEEEEeCCCCCcceeeecCCCC-ceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 346 TRRSDELFNSELLACPVDNTSETTVLIPHRES-VKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
.-... ....+.+++........+..+.... .....+.+.+..+++.... ...+.+.+..
T Consensus 224 ~~~~~--~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~--~~~V~vid~~ 283 (381)
T COG3391 224 ANDGS--GSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ--GGTVSVIDGA 283 (381)
T ss_pred EeccC--CCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecC--CCeEEEEeCC
Confidence 65543 1357888887653222222222221 1223445556666555433 3446666554
No 291
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=96.28 E-value=1.2 Score=51.44 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=101.7
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEE-ecCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEW-AGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~w-spDg-~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
..+.|.|||++| ++...+| .|.+++...-+..+.++......+.| +-++ .|+-.+.+ +.|.++.++.+
T Consensus 17 t~i~~d~~gefi-~tcgsdg----~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~-----~tv~~y~fps~ 86 (933)
T KOG1274|consen 17 TLICYDPDGEFI-CTCGSDG----DIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQ-----NTVLRYKFPSG 86 (933)
T ss_pred EEEEEcCCCCEE-EEecCCC----ceEEeecCCcccCCchhhccCceeEEEeecccceEEeecc-----ceEEEeeCCCC
Confidence 345899999955 5555555 47777655543333344422122334 3444 34333322 34888899888
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEEEEEcCC
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITRRSD 350 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~ 350 (758)
+. +.++..-.-+. -.+.++-+|+++++.+.+ ..|-++++.+....+.+.+....+. ..++|.|..|+..+-.
T Consensus 87 ~~-~~iL~Rftlp~--r~~~v~g~g~~iaagsdD---~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~d- 159 (933)
T KOG1274|consen 87 EE-DTILARFTLPI--RDLAVSGSGKMIAAGSDD---TAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCD- 159 (933)
T ss_pred Cc-cceeeeeeccc--eEEEEecCCcEEEeecCc---eeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecC-
Confidence 65 33332211121 145789999999886544 3467777776552333444333333 3488988877766543
Q ss_pred CCCCcEEEEEeCCCCCcc-ee--eecCCCC-----ceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 351 ELFNSELLACPVDNTSET-TV--LIPHRES-----VKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 351 ~~~~~~L~~~~~~~~~~~-~~--l~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+.|..+++.+.... .+ +.+..+. .....|++.+..+++...++. +.+|+..
T Consensus 160 ----G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~---Vkvy~r~ 218 (933)
T KOG1274|consen 160 ----GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNT---VKVYSRK 218 (933)
T ss_pred ----ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCe---EEEEccC
Confidence 46777787653221 12 2221111 112345555556655554433 5566655
No 292
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=96.28 E-value=1.6 Score=44.44 Aligned_cols=242 Identities=11% Similarity=0.040 Sum_probs=125.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccC-cceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~-~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
.+.++.+|+||.+|+-..+ .-.|.++|..+|+.+.. .-.. ...-+.|.... .+.+.+. .....+.+..+
T Consensus 16 ~i~sl~fs~~G~~litss~-----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt---k~d~tIryLsl 87 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSSE-----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST---KEDDTIRYLSL 87 (311)
T ss_pred ceeEEEecCCCCEEEEecC-----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC---CCCCceEEEEe
Confidence 4678899999999986433 23699999999987763 2221 13346787666 7777665 22345766677
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEc
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRR 348 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~ 348 (758)
-+. +-+.-|.+.. ....++..+|-+.. ++++....+ |.++|+...+ -+-+..-.......++|.|-.+++..+
T Consensus 88 ~dN--kylRYF~GH~-~~V~sL~~sP~~d~-FlS~S~D~t--vrLWDlR~~~-cqg~l~~~~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 88 HDN--KYLRYFPGHK-KRVNSLSVSPKDDT-FLSSSLDKT--VRLWDLRVKK-CQGLLNLSGRPIAAFDPEGLIFALANG 160 (311)
T ss_pred ecC--ceEEEcCCCC-ceEEEEEecCCCCe-EEecccCCe--EEeeEecCCC-CceEEecCCCcceeECCCCcEEEEecC
Confidence 655 3444555443 33457788887754 344433333 5556666544 111111111123347888865544433
Q ss_pred CCCCCCcEEEEEeCCC--CCccee-eecCCC--CceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCcee
Q 004368 349 SDELFNSELLACPVDN--TSETTV-LIPHRE--SVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSV 423 (758)
Q Consensus 349 ~~~~~~~~L~~~~~~~--~~~~~~-l~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i 423 (758)
.+ .|-..|+.. .+.... .+.... +..--.|+.+|+.+++....+ .+++++.- .|... ...
T Consensus 161 ~~-----~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s---~~~~lDAf-~G~~~------~tf 225 (311)
T KOG1446|consen 161 SE-----LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNAS---FIYLLDAF-DGTVK------STF 225 (311)
T ss_pred CC-----eEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCC---cEEEEEcc-CCcEe------eeE
Confidence 22 444555532 123333 232122 222234566666776655433 24455432 24321 111
Q ss_pred eccCccccc-CCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcE
Q 004368 424 EFIDPVYSI-DPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (758)
Q Consensus 424 ~~p~~~~~i-~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~ 467 (758)
........+ .+...++|+.-+ ++-+ .-.+|..|++++++.
T Consensus 226 s~~~~~~~~~~~a~ftPds~Fv-l~gs---~dg~i~vw~~~tg~~ 266 (311)
T KOG1446|consen 226 SGYPNAGNLPLSATFTPDSKFV-LSGS---DDGTIHVWNLETGKK 266 (311)
T ss_pred eeccCCCCcceeEEECCCCcEE-EEec---CCCcEEEEEcCCCcE
Confidence 111101111 123456777554 3332 224688899988874
No 293
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.27 E-value=0.017 Score=58.16 Aligned_cols=112 Identities=16% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHcCc--EEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDRGF--IFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCY 591 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 591 (758)
....++||+|| |+......-....+.....|+ .++.+.-+..|.. ..|..+ ...-..+-.++...++.|.+.
T Consensus 16 ~~~~vlvfVHG-yn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~d--~~~a~~s~~~l~~~L~~L~~~-- 89 (233)
T PF05990_consen 16 PDKEVLVFVHG-YNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFYD--RESARFSGPALARFLRDLARA-- 89 (233)
T ss_pred CCCeEEEEEeC-CCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhhh--hhhHHHHHHHHHHHHHHHHhc--
Confidence 45689999999 554433222222232222333 6778887766642 222211 112223446666677777765
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhCC---------CceeEEEEcCCccc
Q 004368 592 CTKEKLCIEGRSAGGLLIGAVLNMRP---------DLFKAAVAAVPFVD 631 (758)
Q Consensus 592 ~d~~~i~i~G~S~GG~l~~~~~~~~p---------~~f~a~v~~~~~~d 631 (758)
....+|-|++||||+.++..++.+-. ..|..+|+.+|=+|
T Consensus 90 ~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 90 PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 23589999999999999887776521 24555666665444
No 294
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.26 E-value=0.0054 Score=67.33 Aligned_cols=88 Identities=19% Similarity=0.251 Sum_probs=61.1
Q ss_pred CCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHH
Q 004368 532 PAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGA 611 (758)
Q Consensus 532 ~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~ 611 (758)
..|...+..|.+.||.+ ..|++|.| .+|.... .....++++.+.++.+.+... ..++.++||||||+++..
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~g---YDwR~~~---~~~~~~~~Lk~lIe~~~~~~g--~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFG---YDFRQSN---RLPETMDGLKKKLETVYKASG--GKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCC---CCccccc---cHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECHhHHHHHH
Confidence 44667778999999977 67888755 4565421 112345677777777665422 368999999999999999
Q ss_pred HHhhCCCc----eeEEEEcCC
Q 004368 612 VLNMRPDL----FKAAVAAVP 628 (758)
Q Consensus 612 ~~~~~p~~----f~a~v~~~~ 628 (758)
.+..+|+. .+..|+.++
T Consensus 179 fl~~~p~~~~k~I~~~I~la~ 199 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAA 199 (440)
T ss_pred HHHHCCHhHHhHhccEEEECC
Confidence 99888874 355555444
No 295
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.26 E-value=0.12 Score=54.24 Aligned_cols=177 Identities=12% Similarity=0.093 Sum_probs=91.4
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc--cCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
..+++++||..||- |++...++||+..+-....... ..-+..+.||||| .|++++.+. ..||-.+-+.
T Consensus 148 k~vaf~~~gs~lat-----gg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d~----~~VW~~~~g~ 218 (398)
T KOG0771|consen 148 KVVAFNGDGSKLAT-----GGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGADS----ARVWSVNTGA 218 (398)
T ss_pred eEEEEcCCCCEeee-----ccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCCc----eEEEEeccCc
Confidence 46789999999983 4455689999954443332211 2224568999999 788887652 3466444331
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCC--cEEEEEec--CCcceEEEEEeCCCCC---ceEEeeccccceee-EEeecCCE
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESK--KFLFIASE--SKITRFVFYLDVSKPE---ELRVLTPRVVGVDT-AASHRGNH 342 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg--~~l~~~s~--~~~~~~l~~~d~~~~~---~~~~l~~~~~~~~~-~~s~dg~~ 342 (758)
.-.+ ... .+.+. .+-.+.++.|+ ..+.+... ..+.-.++.+-+-.+. ..+....+...+.. .+|.||+.
T Consensus 219 ~~a~-~t~-~~k~~-~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf 295 (398)
T KOG0771|consen 219 ALAR-KTP-FSKDE-MFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKF 295 (398)
T ss_pred hhhh-cCC-cccch-hhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcE
Confidence 1100 000 11122 22244566655 23333222 2222333333333221 23333444444443 49999999
Q ss_pred EEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC
Q 004368 343 FFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID 388 (758)
Q Consensus 343 l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 388 (758)
+++-++++ .+..++...- +.-.++++-....+.++.+..+
T Consensus 296 ~AlGT~dG-----sVai~~~~~l-q~~~~vk~aH~~~VT~ltF~Pd 335 (398)
T KOG0771|consen 296 LALGTMDG-----SVAIYDAKSL-QRLQYVKEAHLGFVTGLTFSPD 335 (398)
T ss_pred EEEeccCC-----cEEEEEecee-eeeEeehhhheeeeeeEEEcCC
Confidence 99988854 3555555431 1122555555445566555544
No 296
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=96.25 E-value=0.021 Score=58.82 Aligned_cols=110 Identities=18% Similarity=0.140 Sum_probs=70.4
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHH---HcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHH----HHHHHHH
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLL---DRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIA----CAEYLIK 588 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~---~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~----~~~~l~~ 588 (758)
.++|+++-|-||... .|......|. ...+.|......|+...... .. .....+.-+++|.++ .++.++.
T Consensus 2 ~~li~~IPGNPGlv~--fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~-~~-~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVE--FYEEFLSALYEKLNPQFEILGISHAGHSTSPSN-SK-FSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChHH--HHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc-cc-ccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 578999999777532 1333333444 34899999999888654432 00 001233344455444 4444444
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhhCC---CceeEEEEcCCc
Q 004368 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPF 629 (758)
Q Consensus 589 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~~~ 629 (758)
+..-...++.++|||.|+|+++.++.+.+ ..++.+++.-|.
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPT 121 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCc
Confidence 32224589999999999999999999998 567777777765
No 297
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=96.23 E-value=0.043 Score=55.24 Aligned_cols=140 Identities=18% Similarity=0.166 Sum_probs=74.0
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEEC---CCCceee---c-cccCc---ceeEEEecCC-eEEEEEeCCCCCCceE
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDI---ETGTPVG---K-PLVGV---TASVEWAGNE-ALVYITMDEILRPDKA 263 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl---~~g~~~~---~-~~~~~---~~~~~wspDg-~l~y~~~~~~~~~~~v 263 (758)
..++||||++||..--+ .++.||.+ +.|+... . .+.+. ...++||+++ +++-++.|..+ +|
T Consensus 233 ~aavSP~GRFia~~gFT-----pDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~w---ri 304 (420)
T KOG2096|consen 233 DAAVSPDGRFIAVSGFT-----PDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKW---RI 304 (420)
T ss_pred ceeeCCCCcEEEEecCC-----CCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcE---EE
Confidence 46899999999865432 23444443 3344321 1 33332 4457899999 77777766654 35
Q ss_pred EEEEcCCCCCCcEEEeeec------CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec-ccccee-eE
Q 004368 264 WLHKLEADQSNDICLYHEK------DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVD-TA 335 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~------~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~-~~ 335 (758)
|-.++.-...+|.-++.+. ...--+.++.||.|+.|+++..+ .|-++..++++....+.. ....+. ..
T Consensus 305 wdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs----~l~~~~se~g~~~~~~e~~h~~~Is~is 380 (420)
T KOG2096|consen 305 WDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGS----DLKVFASEDGKDYPELEDIHSTTISSIS 380 (420)
T ss_pred eeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCC----ceEEEEcccCccchhHHHhhcCceeeEE
Confidence 5333221111222222211 11122467899999999886543 355666666551111111 111222 34
Q ss_pred EeecCCEEEEE
Q 004368 336 ASHRGNHFFIT 346 (758)
Q Consensus 336 ~s~dg~~l~~~ 346 (758)
|+++|++++-.
T Consensus 381 ~~~~g~~~atc 391 (420)
T KOG2096|consen 381 YSSDGKYIATC 391 (420)
T ss_pred ecCCCcEEeee
Confidence 89999966543
No 298
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=96.10 E-value=0.065 Score=56.95 Aligned_cols=71 Identities=14% Similarity=0.087 Sum_probs=49.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
.+..+.||++|..+.=+ +-...|.+||++||+...- ........+.+-||+ .+|++..-+. +|..+++.
T Consensus 260 ~Vrd~~~s~~g~~fLS~-----sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~----ki~~wDiR 330 (503)
T KOG0282|consen 260 PVRDASFNNCGTSFLSA-----SFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDK----KIRQWDIR 330 (503)
T ss_pred hhhhhhccccCCeeeee-----ecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCC----cEEEEecc
Confidence 56678899999987522 2246799999999998763 334445668899999 7777654322 46666666
Q ss_pred CC
Q 004368 270 AD 271 (758)
Q Consensus 270 ~~ 271 (758)
++
T Consensus 331 s~ 332 (503)
T KOG0282|consen 331 SG 332 (503)
T ss_pred ch
Confidence 55
No 299
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=96.06 E-value=0.17 Score=54.37 Aligned_cols=162 Identities=15% Similarity=0.134 Sum_probs=86.4
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc-----cC--c-ceeEEEecCC-eEEEEEeCCCCCCc
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-----VG--V-TASVEWAGNE-ALVYITMDEILRPD 261 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~-----~~--~-~~~~~wspDg-~l~y~~~~~~~~~~ 261 (758)
..+..-.|.|+.+-...+...+| +++|||+..-+.....+ .+ + ...-+|++|| .|+-...+. .-
T Consensus 269 a~lt~g~whP~~k~~FlT~s~Dg----tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DG---SI 341 (641)
T KOG0772|consen 269 AELTCGCWHPDNKEEFLTCSYDG----TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDG---SI 341 (641)
T ss_pred eeeeccccccCcccceEEecCCC----cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCC---ce
Confidence 45667789999998877776666 68899987543221111 11 1 4556999999 554433333 22
Q ss_pred eEEEEEcCCCCCCcEEEeeec-CC-ceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceE---EeeccccceeeE
Q 004368 262 KAWLHKLEADQSNDICLYHEK-DD-IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELR---VLTPRVVGVDTA 335 (758)
Q Consensus 262 ~v~~~~l~~~~~~~~~v~~~~-~~-~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~---~l~~~~~~~~~~ 335 (758)
++| +.++-........... .+ .-..++.+|.||++|+-.+. .++ |-++|+...+ ++. -|.....+....
T Consensus 342 Q~W--~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~-D~t--LKvWDLrq~kkpL~~~tgL~t~~~~tdc~ 416 (641)
T KOG0772|consen 342 QIW--DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGF-DDT--LKVWDLRQFKKPLNVRTGLPTPFPGTDCC 416 (641)
T ss_pred eee--ecCCcccccceEeeeccCCCCceeEEEeccccchhhhccC-CCc--eeeeeccccccchhhhcCCCccCCCCccc
Confidence 344 3333322222222221 22 12346889999999864322 233 4555666543 111 122223334456
Q ss_pred EeecCCEEEEEEcCC-CCCCcEEEEEeCCC
Q 004368 336 ASHRGNHFFITRRSD-ELFNSELLACPVDN 364 (758)
Q Consensus 336 ~s~dg~~l~~~s~~~-~~~~~~L~~~~~~~ 364 (758)
|||+.+.|+--+... +...+.|+.+|.-+
T Consensus 417 FSPd~kli~TGtS~~~~~~~g~L~f~d~~t 446 (641)
T KOG0772|consen 417 FSPDDKLILTGTSAPNGMTAGTLFFFDRMT 446 (641)
T ss_pred cCCCceEEEecccccCCCCCceEEEEeccc
Confidence 999887554333321 12234677776543
No 300
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=96.06 E-value=0.035 Score=56.85 Aligned_cols=169 Identities=16% Similarity=0.137 Sum_probs=101.1
Q ss_pred EEeecccccCC----CCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEE
Q 004368 177 LILDENVKAEG----RGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVY 251 (758)
Q Consensus 177 vllD~n~~~~~----~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y 251 (758)
-|+|++....- -|+-++..+.++|-...|.-+... ...|.++|+.++.++.. .+.-....++|+| ..+-|
T Consensus 170 ~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~s----DrsIvLyD~R~~~Pl~KVi~~mRTN~IswnP-eafnF 244 (433)
T KOG0268|consen 170 DIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCAS----DRSIVLYDLRQASPLKKVILTMRTNTICWNP-EAFNF 244 (433)
T ss_pred eecccccCCccceeecCCCceeEEecCCCcchheeeecc----CCceEEEecccCCccceeeeeccccceecCc-cccce
Confidence 36776432211 255577788889988877644422 23599999999988764 3333356699999 44556
Q ss_pred EEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEE--eeccc
Q 004368 252 ITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRV--LTPRV 329 (758)
Q Consensus 252 ~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~--l~~~~ 329 (758)
+..+ +.+.+|.+++..-. ....++.+. ..-.+++.+||-|+-++-.+-++ .|.+++...+. -+- -+++.
T Consensus 245 ~~a~---ED~nlY~~DmR~l~-~p~~v~~dh-vsAV~dVdfsptG~EfvsgsyDk---sIRIf~~~~~~-SRdiYhtkRM 315 (433)
T KOG0268|consen 245 VAAN---EDHNLYTYDMRNLS-RPLNVHKDH-VSAVMDVDFSPTGQEFVSGSYDK---SIRIFPVNHGH-SRDIYHTKRM 315 (433)
T ss_pred eecc---ccccceehhhhhhc-ccchhhccc-ceeEEEeccCCCcchhccccccc---eEEEeecCCCc-chhhhhHhhh
Confidence 6644 34568888876442 234454432 23356788999999876433332 24555555443 221 23344
Q ss_pred cceeeE-EeecCCEEEEEEcCCCCCCcEEEEEeC
Q 004368 330 VGVDTA-ASHRGNHFFITRRSDELFNSELLACPV 362 (758)
Q Consensus 330 ~~~~~~-~s~dg~~l~~~s~~~~~~~~~L~~~~~ 362 (758)
..+... ||.|.++++- ..+ ..|.+|++...
T Consensus 316 q~V~~Vk~S~Dskyi~S--GSd-d~nvRlWka~A 346 (433)
T KOG0268|consen 316 QHVFCVKYSMDSKYIIS--GSD-DGNVRLWKAKA 346 (433)
T ss_pred heeeEEEEeccccEEEe--cCC-Ccceeeeecch
Confidence 444443 8999885443 333 34789998765
No 301
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.04 E-value=0.11 Score=60.44 Aligned_cols=79 Identities=23% Similarity=0.313 Sum_probs=50.4
Q ss_pred EEeeEEECCCCCEEEE-EEeCCCCeEEEEEEEECCCCc--eeeccccCcceeEEE--ecCC--eEEEEEeCCCCC-----
Q 004368 192 SVGCFQVSPDNKLVAY-AEDTKGDEIYTVYVIDIETGT--PVGKPLVGVTASVEW--AGNE--ALVYITMDEILR----- 259 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy-~~~~~G~e~~~l~v~dl~~g~--~~~~~~~~~~~~~~w--spDg--~l~y~~~~~~~~----- 259 (758)
.+-.|.|||||++||| +.-++=+....|||.||.+.. .+.+.++++.. +.| ...| .|.|++....+.
T Consensus 351 ~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~aai-prwrv~e~gdt~ivyv~~a~nn~d~~~~ 429 (912)
T TIGR02171 351 SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENAAI-PRWRVLENGDTVIVYVSDASNNKDDATF 429 (912)
T ss_pred ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccccc-cceEecCCCCeEEEEEcCCCCCcchhhh
Confidence 4567999999999999 544440115789999998643 34445565533 456 5777 599997644332
Q ss_pred -CceEEEEEcCCC
Q 004368 260 -PDKAWLHKLEAD 271 (758)
Q Consensus 260 -~~~v~~~~l~~~ 271 (758)
....|.+....+
T Consensus 430 ~~~stw~v~f~~g 442 (912)
T TIGR02171 430 AAYSTWQVPFANG 442 (912)
T ss_pred hhcceEEEEecCC
Confidence 334566665544
No 302
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.02 E-value=2.3 Score=43.99 Aligned_cols=120 Identities=13% Similarity=0.052 Sum_probs=69.5
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCc--ceeEEEecCCeEEEEEeCCCCCCc-eEEEEEcC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGV--TASVEWAGNEALVYITMDEILRPD-KAWLHKLE 269 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~--~~~~~wspDg~l~y~~~~~~~~~~-~v~~~~l~ 269 (758)
.+..+|+...+++...+.| .-+.++|..+|+.... ..++. ++.-+|||||+++|++.++-.... .|-+++..
T Consensus 9 ~~a~~p~~~~avafaRRPG---~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFARRPG---TFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred ceeeCCCCCeEEEEEeCCC---cEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 4678995555555555567 3588999999998753 22332 566799999977788765432222 34455654
Q ss_pred CCCCCcEEEeeecCCce-eeEEEEcCCCcEEEEEecC------Cc---------ceEEEEEeCCCCC
Q 004368 270 ADQSNDICLYHEKDDIY-SLGLQASESKKFLFIASES------KI---------TRFVFYLDVSKPE 320 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~-~~~~~~S~Dg~~l~~~s~~------~~---------~~~l~~~d~~~~~ 320 (758)
.+ -..+-+-..... --.+.+.|||+.|++.... .+ ...|.++|..+++
T Consensus 86 ~~---~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ 149 (305)
T PF07433_consen 86 RG---YRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGA 149 (305)
T ss_pred CC---cEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCc
Confidence 22 112211111000 0135689999999886422 00 1357778777776
No 303
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.98 E-value=0.035 Score=53.24 Aligned_cols=106 Identities=16% Similarity=0.101 Sum_probs=75.6
Q ss_pred CEEEEecCCCccCCC--CCCChHHHHHHHcCcEEEEEecCCCC-CCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCC
Q 004368 517 PLLLYGYGSYEICND--PAFNSSRLSLLDRGFIFAIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCT 593 (758)
Q Consensus 517 P~vl~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~~~RG~g-~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 593 (758)
-.|||+ ||.+.... +.-.....++.+.+|-.+.+..|-+- +||.. .-..+.+|+..+++++...++.
T Consensus 37 ~~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~fS- 106 (299)
T KOG4840|consen 37 VKVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGFS- 106 (299)
T ss_pred EEEEEE-cccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCcc-
Confidence 344444 55554432 21223345778889999999998765 35542 2235678999999999877764
Q ss_pred CCcEEEEEeChhHHHHHHHHhh--CCCceeEEEEcCCccchh
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNM--RPDLFKAAVAAVPFVDVL 633 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~~~~d~~ 633 (758)
..|.++|||-|..=++..+++ .|...+|+|+.+|+.|-.
T Consensus 107 -t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 -TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred -cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 599999999999977777754 356789999999999954
No 304
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=95.96 E-value=0.42 Score=53.76 Aligned_cols=184 Identities=17% Similarity=0.172 Sum_probs=99.2
Q ss_pred EEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc--ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEE----Ec
Q 004368 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH----KL 268 (758)
Q Consensus 196 ~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~----~l 268 (758)
..+=|.+++|..+.. ...|.|+|+++....... -++...+++-+||+ .++-.+.|.. -+.|-. ..
T Consensus 418 ~~Fvpgd~~Iv~G~k-----~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDkt---VkfWdf~l~~~~ 489 (888)
T KOG0306|consen 418 SKFVPGDRYIVLGTK-----NGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKT---VKFWDFKLVVSV 489 (888)
T ss_pred EEecCCCceEEEecc-----CCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcE---EEEEeEEEEecc
Confidence 356677777765443 236888999888766531 14456667888999 5544443332 122211 11
Q ss_pred CCCCCCcEE------EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccc-eeeEEeecCC
Q 004368 269 EADQSNDIC------LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGN 341 (758)
Q Consensus 269 ~~~~~~~~~------v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~ 341 (758)
++.+ +.++ +++-.+ -.+.++.||||++|+++--+ .+-.||.+|.=.- ..-|..+.-- ....+|||++
T Consensus 490 ~gt~-~k~lsl~~~rtLel~d--dvL~v~~Spdgk~LaVsLLd-nTVkVyflDtlKF--flsLYGHkLPV~smDIS~DSk 563 (888)
T KOG0306|consen 490 PGTQ-KKVLSLKHTRTLELED--DVLCVSVSPDGKLLAVSLLD-NTVKVYFLDTLKF--FLSLYGHKLPVLSMDISPDSK 563 (888)
T ss_pred Cccc-ceeeeeccceEEeccc--cEEEEEEcCCCcEEEEEecc-CeEEEEEecceee--eeeecccccceeEEeccCCcC
Confidence 1111 1111 111112 23567899999999886543 3456777764221 1112222111 2234899988
Q ss_pred EEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCe
Q 004368 342 HFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGL 399 (758)
Q Consensus 342 ~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 399 (758)
.++ ....+ .|.+++=.|..+ -.+-++.+++.+.-..|.+ ..++++++..++.
T Consensus 564 liv-TgSAD--KnVKiWGLdFGD--CHKS~fAHdDSvm~V~F~P-~~~~FFt~gKD~k 615 (888)
T KOG0306|consen 564 LIV-TGSAD--KNVKIWGLDFGD--CHKSFFAHDDSVMSVQFLP-KTHLFFTCGKDGK 615 (888)
T ss_pred eEE-eccCC--CceEEeccccch--hhhhhhcccCceeEEEEcc-cceeEEEecCcce
Confidence 443 33333 367777766532 2333777765433333434 5678888888775
No 305
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=95.96 E-value=2.1 Score=43.23 Aligned_cols=115 Identities=13% Similarity=0.082 Sum_probs=67.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc---cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~---~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
.+....|+|||..+| .|+-..+|++|++-+...-.-.+ .+++.++.|++|+..+|....+. .|+.+++
T Consensus 49 eI~~~~F~P~gs~~a-----SgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk----~v~~wD~ 119 (338)
T KOG0265|consen 49 EIYTIKFHPDGSCFA-----SGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDK----TVRGWDA 119 (338)
T ss_pred eEEEEEECCCCCeEe-----ecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCc----eEEEEec
Confidence 466779999999998 34445789999986644321122 23466789999995445544332 4788888
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
.+++. ..-+.. +..+.-.+..+.-|-.|+.+..+..+-+|| |..+.+
T Consensus 120 ~tG~~--~rk~k~-h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~--D~R~k~ 166 (338)
T KOG0265|consen 120 ETGKR--IRKHKG-HTSFVNSLDPSRRGPQLVCSGSDDGTLKLW--DIRKKE 166 (338)
T ss_pred cccee--eehhcc-ccceeeecCccccCCeEEEecCCCceEEEE--eecccc
Confidence 87732 222221 223332333444566666655555555555 554433
No 306
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=95.89 E-value=0.26 Score=51.90 Aligned_cols=118 Identities=17% Similarity=0.145 Sum_probs=72.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
.+.+.++.|||-.++ .|.....|.|||++++.... .+++ -+..+.||.+|.++.+..+++ .|.+++|
T Consensus 349 ~~ts~~fHpDgLifg-----tgt~d~~vkiwdlks~~~~a-~Fpght~~vk~i~FsENGY~Lat~add~----~V~lwDL 418 (506)
T KOG0289|consen 349 EYTSAAFHPDGLIFG-----TGTPDGVVKIWDLKSQTNVA-KFPGHTGPVKAISFSENGYWLATAADDG----SVKLWDL 418 (506)
T ss_pred eeEEeeEcCCceEEe-----ccCCCceEEEEEcCCccccc-cCCCCCCceeEEEeccCceEEEEEecCC----eEEEEEe
Confidence 355667777776654 35556799999999887544 3333 256689999994444544432 2778888
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l 325 (758)
.....-.....++.. -..++.+...|++|++. ...-.||..+-.+.. |+.+
T Consensus 419 RKl~n~kt~~l~~~~--~v~s~~fD~SGt~L~~~---g~~l~Vy~~~k~~k~-W~~~ 469 (506)
T KOG0289|consen 419 RKLKNFKTIQLDEKK--EVNSLSFDQSGTYLGIA---GSDLQVYICKKKTKS-WTEI 469 (506)
T ss_pred hhhcccceeeccccc--cceeEEEcCCCCeEEee---cceeEEEEEeccccc-ceee
Confidence 755322222222221 13356788899999886 233456776655554 6554
No 307
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=95.87 E-value=0.46 Score=48.30 Aligned_cols=147 Identities=17% Similarity=0.170 Sum_probs=81.5
Q ss_pred CCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-----cccC--cceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 199 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 199 SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-----~~~~--~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
-|+-.+.|.++.. .-|++||.-+|+.+.- ..+. ...++.||||| +| |...... |...++..
T Consensus 120 qP~t~l~a~ssr~-----~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeql-faGykrc-----irvFdt~R 188 (406)
T KOG2919|consen 120 QPSTNLFAVSSRD-----QPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQL-FAGYKRC-----IRVFDTSR 188 (406)
T ss_pred CCccceeeecccc-----CceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeE-eecccce-----EEEeeccC
Confidence 4677777765542 4599999999998631 1111 13458999999 55 4444321 33334321
Q ss_pred CCCCcEEEeee------cCCceeeEEEEcC-CCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCE
Q 004368 271 DQSNDICLYHE------KDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNH 342 (758)
Q Consensus 271 ~~~~~~~v~~~------~~~~~~~~~~~S~-Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~ 342 (758)
.. .+-.++.. ....+...+++|| |.+.+++.+-. ....||.-| +..++..+..+..++.. .|-+||.+
T Consensus 189 pG-r~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~-q~~giy~~~--~~~pl~llggh~gGvThL~~~edGn~ 264 (406)
T KOG2919|consen 189 PG-RDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYG-QRVGIYNDD--GRRPLQLLGGHGGGVTHLQWCEDGNK 264 (406)
T ss_pred CC-CCCcchhhhhcccccccceeeeeeccCCCCcceeeeccc-ceeeeEecC--CCCceeeecccCCCeeeEEeccCcCe
Confidence 11 22222211 1122333466777 44566654432 223344333 33346666666666654 48999999
Q ss_pred EEEEEcCCCCCCcEEEEEeCCC
Q 004368 343 FFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 343 l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
|+.-+..+ -+|...|+..
T Consensus 265 lfsGaRk~----dkIl~WDiR~ 282 (406)
T KOG2919|consen 265 LFSGARKD----DKILCWDIRY 282 (406)
T ss_pred ecccccCC----CeEEEEeehh
Confidence 88766654 4688888764
No 308
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.85 E-value=2.3 Score=44.02 Aligned_cols=63 Identities=21% Similarity=0.141 Sum_probs=42.1
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc--cCc-ceeEEEecCC-eEEE
Q 004368 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGV-TASVEWAGNE-ALVY 251 (758)
Q Consensus 189 ~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~-~~~~~wspDg-~l~y 251 (758)
+-...+.-.+||||++|.-+...-.+.+-.|-|+|++.+-.+...+ .++ --.+.|.||| +|+.
T Consensus 49 gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvV 115 (305)
T PF07433_consen 49 GRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVV 115 (305)
T ss_pred CCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEE
Confidence 4455667799999999877766555557889999998433222222 333 3457899999 6543
No 309
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=95.83 E-value=0.06 Score=59.66 Aligned_cols=120 Identities=18% Similarity=0.228 Sum_probs=74.3
Q ss_pred CCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCce
Q 004368 187 GRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDK 262 (758)
Q Consensus 187 ~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~ 262 (758)
+|| +.+.....||+|+.||=.....--+...|++|+..+=.... .+.+ .+..++||||| .|+-++.|+. ..
T Consensus 523 GHG-yEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~-~L~~HsLTVT~l~FSpdg~~LLsvsRDRt---~s 597 (764)
T KOG1063|consen 523 GHG-YEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQ-ELEGHSLTVTRLAFSPDGRYLLSVSRDRT---VS 597 (764)
T ss_pred cCc-eeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhh-eecccceEEEEEEECCCCcEEEEeecCce---EE
Confidence 344 57888999999999998776666677899999976533322 2332 26779999999 5665655442 23
Q ss_pred EEEEEcCCCCCCcEEEe--eecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEe
Q 004368 263 AWLHKLEADQSNDICLY--HEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD 315 (758)
Q Consensus 263 v~~~~l~~~~~~~~~v~--~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d 315 (758)
|| ....+. .+..-| .....++..+.+|+||+++ ++++++..+-.+|...
T Consensus 598 l~--~~~~~~-~~e~~fa~~k~HtRIIWdcsW~pde~~-FaTaSRDK~VkVW~~~ 648 (764)
T KOG1063|consen 598 LY--EVQEDI-KDEFRFACLKAHTRIIWDCSWSPDEKY-FATASRDKKVKVWEEP 648 (764)
T ss_pred ee--eeeccc-chhhhhccccccceEEEEcccCcccce-eEEecCCceEEEEecc
Confidence 44 332221 111112 2234455667889999999 4445544445555543
No 310
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=95.82 E-value=0.011 Score=63.22 Aligned_cols=112 Identities=19% Similarity=0.212 Sum_probs=70.9
Q ss_pred EEEEecCCCccCCCCCCChH-HHHHHH-cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHc---CCC
Q 004368 518 LLLYGYGSYEICNDPAFNSS-RLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN---CYC 592 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~-~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~ 592 (758)
++|++|||.--+..++.... ...|+. ...+|+.+|||-|. +|.=+........+.-.+-|..=|++|+.++ -..
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGG 215 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGG 215 (601)
T ss_pred EEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCC
Confidence 88999997443334433222 234444 35788999999542 3322111111223333457888899999776 335
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCC---CceeEEEEcCCccc
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRP---DLFKAAVAAVPFVD 631 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~~~~d 631 (758)
||++|.++|.|+|..-+.+=+.. | .+|+-+|+++|-.+
T Consensus 216 np~~vTLFGESAGaASv~aHLls-P~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 216 NPSRVTLFGESAGAASVVAHLLS-PGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CcceEEEeccccchhhhhheecC-CCchhhHHHHHhhcCCCC
Confidence 99999999999999855433332 4 37999999988654
No 311
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.82 E-value=2.1 Score=53.05 Aligned_cols=196 Identities=17% Similarity=0.177 Sum_probs=103.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecccc------------------CcceeEEEecCCeEEEEEe
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV------------------GVTASVEWAGNEALVYITM 254 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~------------------~~~~~~~wspDg~l~y~~~ 254 (758)
..++.++++|..| |..|..+ ..|+++|+.++........ +...+++++|++..+|++.
T Consensus 626 P~GIavd~~gn~L-YVaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad 701 (1057)
T PLN02919 626 PQGLAYNAKKNLL-YVADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM 701 (1057)
T ss_pred CcEEEEeCCCCEE-EEEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE
Confidence 3567888888875 5555443 4688889887765432100 0123578999663334443
Q ss_pred CCCCCCceEEEEEcCCCCCCcEEEeeec------C------C--ceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 255 DEILRPDKAWLHKLEADQSNDICLYHEK------D------D--IYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 255 ~~~~~~~~v~~~~l~~~~~~~~~v~~~~------~------~--~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
.. .++|+.++..++. ...+... + . ..-.+++++|||++|++... ..+.|+++|++++.
T Consensus 702 ~~---~~~I~v~d~~~g~---v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs--~n~~Irv~D~~tg~ 773 (1057)
T PLN02919 702 AG---QHQIWEYNISDGV---TRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADS--ESSSIRALDLKTGG 773 (1057)
T ss_pred CC---CCeEEEEECCCCe---EEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEEC--CCCeEEEEECCCCc
Confidence 22 2357777765441 1122110 0 0 01125789999999887543 34678899987754
Q ss_pred ceEEeeccc-------------cc----------eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCC--
Q 004368 321 ELRVLTPRV-------------VG----------VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHR-- 375 (758)
Q Consensus 321 ~~~~l~~~~-------------~~----------~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~-- 375 (758)
...+.... ++ ....++++|+ +|+. +.. +.+|.++|.++. ....+....
T Consensus 774 -~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVA-Ds~---N~rIrviD~~tg-~v~tiaG~G~~ 846 (1057)
T PLN02919 774 -SRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVA-DSY---NHKIKKLDPATK-RVTTLAGTGKA 846 (1057)
T ss_pred -EEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEE-ECC---CCEEEEEECCCC-eEEEEeccCCc
Confidence 32222100 00 0123677776 5544 332 568888887652 212222111
Q ss_pred ----------CCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCC
Q 004368 376 ----------ESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 376 ----------~~~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~ 409 (758)
.-....++.++.+ .+++.- .+...|+++++..
T Consensus 847 G~~dG~~~~a~l~~P~GIavd~dG~lyVaD--t~Nn~Irvid~~~ 889 (1057)
T PLN02919 847 GFKDGKALKAQLSEPAGLALGENGRLFVAD--TNNSLIRYLDLNK 889 (1057)
T ss_pred CCCCCcccccccCCceEEEEeCCCCEEEEE--CCCCEEEEEECCC
Confidence 0012345666544 444433 3334688888874
No 312
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=95.76 E-value=0.1 Score=55.72 Aligned_cols=146 Identities=20% Similarity=0.198 Sum_probs=86.7
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
..++|||.| |+|+.-.+| +|.||||.....++ .+.+ ..+.+.-|+|| +|+--..|. .|..+++.+
T Consensus 514 ALa~spDak-vcFsccsdG----nI~vwDLhnq~~Vr-qfqGhtDGascIdis~dGtklWTGGlDn-----tvRcWDlre 582 (705)
T KOG0639|consen 514 ALAISPDAK-VCFSCCSDG----NIAVWDLHNQTLVR-QFQGHTDGASCIDISKDGTKLWTGGLDN-----TVRCWDLRE 582 (705)
T ss_pred hhhcCCccc-eeeeeccCC----cEEEEEcccceeee-cccCCCCCceeEEecCCCceeecCCCcc-----ceeehhhhh
Confidence 457899987 578877667 59999998776655 3322 35668899999 665333333 366777765
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEEEcC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRS 349 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~ 349 (758)
+ ....-++- ..-.+++...|.|.||++...+ +.++++...+.+ .-.|.-.+.-+.. -|++-|+|++- +..
T Consensus 583 g--rqlqqhdF--~SQIfSLg~cP~~dWlavGMen---s~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfvS-tGk 653 (705)
T KOG0639|consen 583 G--RQLQQHDF--SSQIFSLGYCPTGDWLAVGMEN---SNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFVS-TGK 653 (705)
T ss_pred h--hhhhhhhh--hhhheecccCCCccceeeeccc---CcEEEEecCCcc-ceeecccccEEEEEEecccCceeee-cCc
Confidence 5 22212111 1123467789999999986543 457888776655 3333333222222 28888986553 333
Q ss_pred CCCCCcEEEEEeC
Q 004368 350 DELFNSELLACPV 362 (758)
Q Consensus 350 ~~~~~~~L~~~~~ 362 (758)
+. -...|+++-
T Consensus 654 Dn--lLnawrtPy 664 (705)
T KOG0639|consen 654 DN--LLNAWRTPY 664 (705)
T ss_pred hh--hhhhccCcc
Confidence 31 233555543
No 313
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.76 E-value=0.22 Score=52.20 Aligned_cols=157 Identities=13% Similarity=0.073 Sum_probs=81.5
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-c-cc--CcceeEEEecCC-e-EEEEEe-CCCCCCceE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LV--GVTASVEWAGNE-A-LVYITM-DEILRPDKA 263 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~--~~~~~~~wspDg-~-l~y~~~-~~~~~~~~v 263 (758)
..+.+..+||||+.||+.... ...||++.+|..+.. + .. .......|+.|+ + .+|+.. ......-.+
T Consensus 187 ~eV~DL~FS~dgk~lasig~d------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~ 260 (398)
T KOG0771|consen 187 AEVKDLDFSPDGKFLASIGAD------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRL 260 (398)
T ss_pred CccccceeCCCCcEEEEecCC------ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeE
Confidence 468889999999999987642 578999999965532 2 11 125567888887 2 222222 111111112
Q ss_pred EEEEcCCCCCCcEEEeeec--CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce---eeEEee
Q 004368 264 WLHKLEADQSNDICLYHEK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---DTAASH 338 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~--~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~---~~~~s~ 338 (758)
+...+-.+ ...+..... ...-..+...|+||+++++.+.+ ..|-++++.+-+ ...+.++.... ...|+|
T Consensus 261 ~~~~~w~~--~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d---GsVai~~~~~lq-~~~~vk~aH~~~VT~ltF~P 334 (398)
T KOG0771|consen 261 CDISLWSG--SNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMD---GSVAIYDAKSLQ-RLQYVKEAHLGFVTGLTFSP 334 (398)
T ss_pred EEeeeecc--ccccchhhhhhccCcceeEEEcCCCcEEEEeccC---CcEEEEEeceee-eeEeehhhheeeeeeEEEcC
Confidence 22222221 111111111 11112356789999999997763 335566665433 22233322211 123788
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeC
Q 004368 339 RGNHFFITRRSDELFNSELLACPV 362 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~ 362 (758)
|.+.+.-++... ...|..+.+
T Consensus 335 dsr~~~svSs~~---~~~v~~l~v 355 (398)
T KOG0771|consen 335 DSRYLASVSSDN---EAAVTKLAV 355 (398)
T ss_pred CcCcccccccCC---ceeEEEEee
Confidence 877665543332 244555544
No 314
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=95.75 E-value=2.6 Score=42.51 Aligned_cols=169 Identities=14% Similarity=0.151 Sum_probs=94.2
Q ss_pred CCceEEeecccccCCC----CeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCC--c---eeeccccC---ccee
Q 004368 173 PPEHLILDENVKAEGR----GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG--T---PVGKPLVG---VTAS 240 (758)
Q Consensus 173 ~~~~vllD~n~~~~~~----~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g--~---~~~~~~~~---~~~~ 240 (758)
++.-++.|.-+-.+.+ ....+-..++||.|++||-. +-....-|+++.+. + .+...+.+ ..+.
T Consensus 76 DGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcG-----GLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylSc 150 (343)
T KOG0286|consen 76 DGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACG-----GLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSC 150 (343)
T ss_pred CCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEec-----CcCceeEEEecccccccccceeeeeecCccceeEE
Confidence 3556777753322222 23466678899999999953 22345556666643 2 11112333 2455
Q ss_pred EEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcC-CCcEEEEEecCCcceEEEEEeCCCC
Q 004368 241 VEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASE-SKKFLFIASESKITRFVFYLDVSKP 319 (758)
Q Consensus 241 ~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~-Dg~~l~~~s~~~~~~~l~~~d~~~~ 319 (758)
-.|.+|+.|+-.+.|. .-.++++.++ ..+..|..... -.++++.+| |++.. ++........|| |+..+
T Consensus 151 C~f~dD~~ilT~SGD~-----TCalWDie~g--~~~~~f~GH~g-DV~slsl~p~~~ntF-vSg~cD~~aklW--D~R~~ 219 (343)
T KOG0286|consen 151 CRFLDDNHILTGSGDM-----TCALWDIETG--QQTQVFHGHTG-DVMSLSLSPSDGNTF-VSGGCDKSAKLW--DVRSG 219 (343)
T ss_pred EEEcCCCceEecCCCc-----eEEEEEcccc--eEEEEecCCcc-cEEEEecCCCCCCeE-Eecccccceeee--eccCc
Confidence 6888888775444332 3556788887 45667765433 345788899 77764 444444444444 66555
Q ss_pred CceEEeeccccceeeE-EeecCCEEEEEEcCCCCCCcEEEEE
Q 004368 320 EELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLAC 360 (758)
Q Consensus 320 ~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~~L~~~ 360 (758)
...+.+..++.++... |-|+|..|+ +..+ ...-+||-+
T Consensus 220 ~c~qtF~ghesDINsv~ffP~G~afa--tGSD-D~tcRlyDl 258 (343)
T KOG0286|consen 220 QCVQTFEGHESDINSVRFFPSGDAFA--TGSD-DATCRLYDL 258 (343)
T ss_pred ceeEeecccccccceEEEccCCCeee--ecCC-CceeEEEee
Confidence 4244444454444433 778887544 4433 123455543
No 315
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=95.74 E-value=2.9 Score=50.94 Aligned_cols=187 Identities=13% Similarity=0.112 Sum_probs=99.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEE----ECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCC----CCCc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVI----DIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEI----LRPD 261 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~----dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~----~~~~ 261 (758)
.+-++.+-+|...|.+... +| +|.++ +..+.+.... .++.....++||||+ .+++++.... .+..
T Consensus 77 ~ivs~~yl~d~~~l~~~~~-~G----di~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f 151 (928)
T PF04762_consen 77 KIVSFQYLADSESLCIALA-SG----DIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDF 151 (928)
T ss_pred cEEEEEeccCCCcEEEEEC-Cc----eEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence 4667777888887766654 33 46666 4444443322 445456678999999 6666654321 0000
Q ss_pred eE--------------EEEEcCCCCCCcEEEeee--------------------c---CCceeeEEEEcCCCcEEEEEec
Q 004368 262 KA--------------WLHKLEADQSNDICLYHE--------------------K---DDIYSLGLQASESKKFLFIASE 304 (758)
Q Consensus 262 ~v--------------~~~~l~~~~~~~~~v~~~--------------------~---~~~~~~~~~~S~Dg~~l~~~s~ 304 (758)
++ -.+.+|=|. ..+.|.+ . .......++|-.||+|+++++-
T Consensus 152 d~i~E~~l~~~~~~~~~~VsVGWGk--KeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 152 DPISEVPLDSDDFGESKHVSVGWGK--KETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred eEEEEeecCccccCCCceeeeccCc--ccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEE
Confidence 00 011222111 1111100 0 1112356889999999999885
Q ss_pred C--Cc-ceEEEEEeCCCCCceEEeeccccceee--EEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecC-CCCc
Q 004368 305 S--KI-TRFVFYLDVSKPEELRVLTPRVVGVDT--AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPH-RESV 378 (758)
Q Consensus 305 ~--~~-~~~l~~~d~~~~~~~~~l~~~~~~~~~--~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~-~~~~ 378 (758)
. .+ .+.+.+++-+ |. +.-......+.+. .|-|.|..++-..... ....|....-++--...-.++. ..+.
T Consensus 230 ~~~~~~~R~iRVy~Re-G~-L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~--~~~~VvFfErNGLrhgeF~l~~~~~~~ 305 (928)
T PF04762_consen 230 EPETGSRRVIRVYSRE-GE-LQSTSEPVDGLEGALSWRPSGNLIASSQRLP--DRHDVVFFERNGLRHGEFTLRFDPEEE 305 (928)
T ss_pred EcCCCceeEEEEECCC-ce-EEeccccCCCccCCccCCCCCCEEEEEEEcC--CCcEEEEEecCCcEeeeEecCCCCCCc
Confidence 3 33 4566666665 43 5544444455443 4999999877766543 3456666665442111122221 2344
Q ss_pred eeeeEEEeCCE
Q 004368 379 KLQDIQLFIDH 389 (758)
Q Consensus 379 ~~~~~~~~~~~ 389 (758)
.+..+.|..+.
T Consensus 306 ~v~~l~Wn~ds 316 (928)
T PF04762_consen 306 KVIELAWNSDS 316 (928)
T ss_pred eeeEEEECCCC
Confidence 56777777654
No 316
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=95.73 E-value=1 Score=43.80 Aligned_cols=157 Identities=13% Similarity=0.094 Sum_probs=79.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCCeEEEEEe-CCC----------C
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITM-DEI----------L 258 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg~l~y~~~-~~~----------~ 258 (758)
+-....|-|...+| .++..-.+++||++||+..+. +.+ -...+.|..++.+++... |.. .
T Consensus 62 VlD~~~s~Dnskf~-----s~GgDk~v~vwDV~TGkv~Rr-~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ 135 (307)
T KOG0316|consen 62 VLDAALSSDNSKFA-----SCGGDKAVQVWDVNTGKVDRR-FRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF 135 (307)
T ss_pred eeeccccccccccc-----cCCCCceEEEEEcccCeeeee-cccccceeeEEEecCcceEEEeccccceeEEEEcccCCC
Confidence 33456677777776 233357899999999998762 222 245577766665555432 221 1
Q ss_pred CCceE--------EEEEcCC-----C-CCCcEEEeeecCCc--------eeeEEEEcCCCcEEEEEecCCcceEEEEEeC
Q 004368 259 RPDKA--------WLHKLEA-----D-QSNDICLYHEKDDI--------YSLGLQASESKKFLFIASESKITRFVFYLDV 316 (758)
Q Consensus 259 ~~~~v--------~~~~l~~-----~-~~~~~~v~~~~~~~--------~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~ 316 (758)
+|-|+ .-+++.. + ....+..|.-.... -..++++|+||...++.+-+ +.|.++|-
T Consensus 136 ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~---stlrLlDk 212 (307)
T KOG0316|consen 136 EPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLD---STLRLLDK 212 (307)
T ss_pred CccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeecc---ceeeeccc
Confidence 11111 1111110 0 00111222111100 11246789999988876644 34788888
Q ss_pred CCCCceEEeeccccceeeE----EeecCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 317 SKPEELRVLTPRVVGVDTA----ASHRGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~~----~s~dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
++++ +-...++..+.+|- +.. ....++...+ .+.+|.+|+.+
T Consensus 213 ~tGk-lL~sYkGhkn~eykldc~l~q-sdthV~sgSE----DG~Vy~wdLvd 258 (307)
T KOG0316|consen 213 ETGK-LLKSYKGHKNMEYKLDCCLNQ-SDTHVFSGSE----DGKVYFWDLVD 258 (307)
T ss_pred chhH-HHHHhcccccceeeeeeeecc-cceeEEeccC----CceEEEEEecc
Confidence 8876 32222222233332 322 2334444333 36788888754
No 317
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=95.69 E-value=0.8 Score=47.83 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=72.5
Q ss_pred eeEEECCCCCE-EEEEEeCCCCeEEEEEEEECCCCceee-c-----cccC---cceeEEEecCC-eEEEEEeCCCCCCce
Q 004368 194 GCFQVSPDNKL-VAYAEDTKGDEIYTVYVIDIETGTPVG-K-----PLVG---VTASVEWAGNE-ALVYITMDEILRPDK 262 (758)
Q Consensus 194 ~~~~~SPDG~~-lAy~~~~~G~e~~~l~v~dl~~g~~~~-~-----~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~ 262 (758)
-...|.|=... || +|+|..+|.||.+-.+-... + .+.+ ..+-++|.|-. -++.++. ..+.
T Consensus 85 LDi~w~PfnD~vIA-----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag----~Dn~ 155 (472)
T KOG0303|consen 85 LDIDWCPFNDCVIA-----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAG----SDNT 155 (472)
T ss_pred cccccCccCCceee-----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhcc----CCce
Confidence 35578885443 44 58888999999876543321 1 1222 25668999887 5555543 2346
Q ss_pred EEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 263 AWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 263 v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
|.+++++++. ..+.+. .+....+++|+.||..|.-+..+ ..|.++|..+++
T Consensus 156 v~iWnv~tge--ali~l~--hpd~i~S~sfn~dGs~l~TtckD---KkvRv~dpr~~~ 206 (472)
T KOG0303|consen 156 VSIWNVGTGE--ALITLD--HPDMVYSMSFNRDGSLLCTTCKD---KKVRVIDPRRGT 206 (472)
T ss_pred EEEEeccCCc--eeeecC--CCCeEEEEEeccCCceeeeeccc---ceeEEEcCCCCc
Confidence 8999999983 333333 56667788999999988654433 457888888776
No 318
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=95.67 E-value=0.25 Score=53.17 Aligned_cols=143 Identities=11% Similarity=0.099 Sum_probs=84.3
Q ss_pred eEEECCCCCEEEEEEeCCC---Ce---EEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 195 CFQVSPDNKLVAYAEDTKG---DE---IYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G---~e---~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
.+.|.+.|++|.+...+.- .. ..+||+.++.......+ .+.+.+-.++|.|++ +|..+..- .+..+-.+
T Consensus 227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~---~pa~~s~~ 303 (561)
T COG5354 227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGY---MPASVSVF 303 (561)
T ss_pred EEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecc---cccceeec
Confidence 4579999999998865432 11 26899999974433322 334556669999999 77666521 12345566
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec-cccceee-EEeecCCEEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDT-AASHRGNHFF 344 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~-~~s~dg~~l~ 344 (758)
++.+. -+-.+.+. .+- .+.+||.++||++..-......+-++|..+. ...+.. ...+..+ .|+|||+.++
T Consensus 304 ~lr~N---l~~~~Pe~-~rN--T~~fsp~~r~il~agF~nl~gni~i~~~~~r--f~~~~~~~~~n~s~~~wspd~qF~~ 375 (561)
T COG5354 304 DLRGN---LRFYFPEQ-KRN--TIFFSPHERYILFAGFDNLQGNIEIFDPAGR--FKVAGAFNGLNTSYCDWSPDGQFYD 375 (561)
T ss_pred ccccc---eEEecCCc-ccc--cccccCcccEEEEecCCccccceEEeccCCc--eEEEEEeecCCceEeeccCCceEEE
Confidence 66543 11122221 111 2347999999998765554555566677653 344322 2233444 4999998665
Q ss_pred EEEc
Q 004368 345 ITRR 348 (758)
Q Consensus 345 ~~s~ 348 (758)
..+.
T Consensus 376 ~~~t 379 (561)
T COG5354 376 TDTT 379 (561)
T ss_pred ecCC
Confidence 5443
No 319
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=95.51 E-value=0.76 Score=48.74 Aligned_cols=196 Identities=13% Similarity=0.151 Sum_probs=111.1
Q ss_pred EEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee-----ecc-c---cCcceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 196 FQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-----GKP-L---VGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 196 ~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-----~~~-~---~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
+.|++.-.--.. +|++..+|.+||+...... +.. + ..++..++|.+-. .+|-...++ ..|.+
T Consensus 183 lsWn~~~~g~Ll----s~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd----~~L~i 254 (422)
T KOG0264|consen 183 LSWNRQQEGTLL----SGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD----GKLMI 254 (422)
T ss_pred cccccccceeEe----eccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC----CeEEE
Confidence 567765432222 2344567899998754331 111 1 2235668999877 444333332 25888
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeecccccee-eEEeecCCEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASHRGNHF 343 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~s~dg~~l 343 (758)
+++.++..+........... ...++|.|-+.+|+.+.+.. ..|.++|+..-. .+..+....+.+. ..|||+.+.+
T Consensus 255 wD~R~~~~~~~~~~~ah~~~-vn~~~fnp~~~~ilAT~S~D--~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv 331 (422)
T KOG0264|consen 255 WDTRSNTSKPSHSVKAHSAE-VNCVAFNPFNEFILATGSAD--KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV 331 (422)
T ss_pred EEcCCCCCCCcccccccCCc-eeEEEeCCCCCceEEeccCC--CcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence 88876422222222222222 33678899888887765543 346777887654 3444444444443 3499999988
Q ss_pred EEEEcCCCCCCcEEEEEeCCCCCcc-----------eeeecCC-CCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcC
Q 004368 344 FITRRSDELFNSELLACPVDNTSET-----------TVLIPHR-ESVKLQDIQLFID--HLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~~~~~~~-----------~~l~~~~-~~~~~~~~~~~~~--~l~~~~~~~g~~~l~v~~l~ 408 (758)
+..+..+ .+|.+.|+..-+.. ..++.+. ....+.+|+|... +++....+++. +.||.+.
T Consensus 332 LASSg~D----~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~--LqIW~~s 404 (422)
T KOG0264|consen 332 LASSGTD----RRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNI--LQIWQMA 404 (422)
T ss_pred eEecccC----CcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCce--EEEeecc
Confidence 8777654 57777777532211 1233333 3345678887764 67777777754 5566665
No 320
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.51 E-value=0.067 Score=59.74 Aligned_cols=131 Identities=18% Similarity=0.166 Sum_probs=86.8
Q ss_pred EEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCCh-HHHHHHHcCcEEEEEecCCCCCCc----hhHHh--ccccc
Q 004368 498 QIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS-SRLSLLDRGFIFAIAQIRGGGELG----RQWYE--NGKFL 570 (758)
Q Consensus 498 ~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~G----~~~~~--~~~~~ 570 (758)
.|..-+..|.+. +.-.+..+-||+.......... ....-+.+||+++.-|- |+.+.. ..|.. .....
T Consensus 16 ~i~fev~LP~~W-----NgR~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~d 89 (474)
T PF07519_consen 16 NIRFEVWLPDNW-----NGRFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLD 89 (474)
T ss_pred eEEEEEECChhh-----ccCeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHH
Confidence 566566667654 2345555666665544332211 13455778999999994 443332 12220 01123
Q ss_pred CCcChHhHHHHHHHHHHHcCC-CCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh
Q 004368 571 KKKNTFTDFIACAEYLIKNCY-CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 634 (758)
Q Consensus 571 ~~~~~~~D~~~~~~~l~~~~~-~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~ 634 (758)
.....+.+...+.+.|++..| ..|++-...|+|-||--.+.++.++|+.|.++|+.+|..++..
T Consensus 90 fa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 90 FAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTH 154 (474)
T ss_pred HHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHH
Confidence 334556666777788887744 4679999999999999999999999999999999999887543
No 321
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.50 E-value=9.7 Score=47.36 Aligned_cols=154 Identities=12% Similarity=0.130 Sum_probs=84.4
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc---c------------CcceeEEEecCCeEEEEEeCCCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---V------------GVTASVEWAGNEALVYITMDEIL 258 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~---~------------~~~~~~~wspDg~l~y~~~~~~~ 258 (758)
+.+.+++++..| |..|... .+|+++|+.+........ . +...++++.+++..+|++...
T Consensus 571 ~gvavd~~~g~l-yVaDs~n---~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~-- 644 (1057)
T PLN02919 571 GKLAIDLLNNRL-FISDSNH---NRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTE-- 644 (1057)
T ss_pred ceEEEECCCCeE-EEEECCC---CeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCC--
Confidence 467888876654 4555443 578889987543322111 0 012457888888555665432
Q ss_pred CCceEEEEEcCCCCCCcEEEeee----------cC------CceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCce
Q 004368 259 RPDKAWLHKLEADQSNDICLYHE----------KD------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 322 (758)
Q Consensus 259 ~~~~v~~~~l~~~~~~~~~v~~~----------~~------~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~ 322 (758)
.+.|..+++.++ .+..+.. .. -..-.++.++|++..|+++.. ....|+++|..++. .
T Consensus 645 -n~~Ir~id~~~~---~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~--~~~~I~v~d~~~g~-v 717 (1057)
T PLN02919 645 -NHALREIDFVNE---TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA--GQHQIWEYNISDGV-T 717 (1057)
T ss_pred -CceEEEEecCCC---EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC--CCCeEEEEECCCCe-E
Confidence 234666665443 1211111 00 001125788997777776543 34568888887654 3
Q ss_pred EEeeccc-----cc-----------eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 323 RVLTPRV-----VG-----------VDTAASHRGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 323 ~~l~~~~-----~~-----------~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
..+.... .+ ....++++|++||+.... +.+|.++|+++
T Consensus 718 ~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~----n~~Irv~D~~t 771 (1057)
T PLN02919 718 RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE----SSSIRALDLKT 771 (1057)
T ss_pred EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC----CCeEEEEECCC
Confidence 2221110 00 112388999988876443 36788888765
No 322
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=95.47 E-value=0.17 Score=53.93 Aligned_cols=150 Identities=12% Similarity=0.139 Sum_probs=87.3
Q ss_pred EEeeEEECC-CCCEEEEEEeCCCCeEEEEEEEECCC-CceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 192 ~i~~~~~SP-DG~~lAy~~~~~G~e~~~l~v~dl~~-g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
.++.+.|.| -|.+|+ + ++-...|+||++-+ ++.++ +.-+ .+..+.|+.+| +|+-.+.|.. |.+
T Consensus 216 gvsai~~fp~~~hLlL-S----~gmD~~vklW~vy~~~~~lr-tf~gH~k~Vrd~~~s~~g~~fLS~sfD~~-----lKl 284 (503)
T KOG0282|consen 216 GVSAIQWFPKKGHLLL-S----GGMDGLVKLWNVYDDRRCLR-TFKGHRKPVRDASFNNCGTSFLSASFDRF-----LKL 284 (503)
T ss_pred ccchhhhccceeeEEE-e----cCCCceEEEEEEecCcceeh-hhhcchhhhhhhhccccCCeeeeeeccee-----eee
Confidence 577889999 666554 2 22346899999876 44444 3322 25568999999 7776666643 667
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccc-ccee-eEEeecCCEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRV-VGVD-TAASHRGNHF 343 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~-~~~~-~~~s~dg~~l 343 (758)
+++.+++ -..-|...... ..+.+.||+..+++..... .+|..+|..+++ +..-..+. ..+. ..|-++|+++
T Consensus 285 wDtETG~--~~~~f~~~~~~--~cvkf~pd~~n~fl~G~sd--~ki~~wDiRs~k-vvqeYd~hLg~i~~i~F~~~g~rF 357 (503)
T KOG0282|consen 285 WDTETGQ--VLSRFHLDKVP--TCVKFHPDNQNIFLVGGSD--KKIRQWDIRSGK-VVQEYDRHLGAILDITFVDEGRRF 357 (503)
T ss_pred eccccce--EEEEEecCCCc--eeeecCCCCCcEEEEecCC--CcEEEEeccchH-HHHHHHhhhhheeeeEEccCCceE
Confidence 7888773 23334332222 2467889997777654433 457778888776 21111111 1122 2255778766
Q ss_pred EEEEcCCCCCCcEEEEEeC
Q 004368 344 FITRRSDELFNSELLACPV 362 (758)
Q Consensus 344 ~~~s~~~~~~~~~L~~~~~ 362 (758)
+..+++. ..+++-...
T Consensus 358 issSDdk---s~riWe~~~ 373 (503)
T KOG0282|consen 358 ISSSDDK---SVRIWENRI 373 (503)
T ss_pred eeeccCc---cEEEEEcCC
Confidence 5555443 466665443
No 323
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.41 E-value=0.19 Score=47.99 Aligned_cols=109 Identities=17% Similarity=0.158 Sum_probs=63.9
Q ss_pred EEEeeccccccCCCCCEEEEecCCCccCCC-C------------C-CChHHHHHHHcCcEEEEEecCCCCCCchhHHhcc
Q 004368 502 CIVYRKNLVKLDGSDPLLLYGYGSYEICND-P------------A-FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENG 567 (758)
Q Consensus 502 ~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~-~------------~-~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~ 567 (758)
+++..++. ...+..++|++||+.-.... | + --+.+..-.+.||-|++.|.- .-+.|++.-
T Consensus 89 FiF~s~~~--lt~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N----~~~kfye~k 162 (297)
T KOG3967|consen 89 FIFMSEDA--LTNPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPN----RERKFYEKK 162 (297)
T ss_pred eEEEChhH--hcCccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCc----hhhhhhhcc
Confidence 34444443 34556789999995322111 1 0 112334556679999998864 122344321
Q ss_pred cccCC--cChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCC
Q 004368 568 KFLKK--KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD 618 (758)
Q Consensus 568 ~~~~~--~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~ 618 (758)
....+ ...++-+..+-.+++. ...++.++++.||+||++++.++.+.|+
T Consensus 163 ~np~kyirt~veh~~yvw~~~v~--pa~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 163 RNPQKYIRTPVEHAKYVWKNIVL--PAKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred cCcchhccchHHHHHHHHHHHhc--ccCcceEEEEEeccCChhHHHHHHhcCC
Confidence 11111 1334444444444443 3567999999999999999999999986
No 324
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=95.37 E-value=0.17 Score=55.49 Aligned_cols=197 Identities=12% Similarity=0.061 Sum_probs=93.0
Q ss_pred EEEeeEEECC-CCCEEEEEEeCCCCeEEEEEEEECCCCce--eecc------ccC-cceeEEEecCC-e-EEEEEeCCCC
Q 004368 191 YSVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTP--VGKP------LVG-VTASVEWAGNE-A-LVYITMDEIL 258 (758)
Q Consensus 191 ~~i~~~~~SP-DG~~lAy~~~~~G~e~~~l~v~dl~~g~~--~~~~------~~~-~~~~~~wspDg-~-l~y~~~~~~~ 258 (758)
..+..+.|.| |-.+||...+. .+|.+|.+..+.. ...+ +.+ .+.++.|.|=. . ++-.+.+
T Consensus 628 t~vtDl~WdPFD~~rLAVa~dd-----g~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd--- 699 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERLAVATDD-----GQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYD--- 699 (1012)
T ss_pred ceeeecccCCCChHHeeecccC-----ceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhcc---
Confidence 3566778888 77788876653 3456665544322 1101 111 13335665543 2 2222222
Q ss_pred CCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecc-----cccee
Q 004368 259 RPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPR-----VVGVD 333 (758)
Q Consensus 259 ~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~-----~~~~~ 333 (758)
..+.++++.+.. +..-+...... .++++|||||+.++-...+. .|.++....++ +++..+ ..+..
T Consensus 700 --~Ti~lWDl~~~~--~~~~l~gHtdq-If~~AWSpdGr~~AtVcKDg---~~rVy~Prs~e--~pv~Eg~gpvgtRgAR 769 (1012)
T KOG1445|consen 700 --STIELWDLANAK--LYSRLVGHTDQ-IFGIAWSPDGRRIATVCKDG---TLRVYEPRSRE--QPVYEGKGPVGTRGAR 769 (1012)
T ss_pred --ceeeeeehhhhh--hhheeccCcCc-eeEEEECCCCcceeeeecCc---eEEEeCCCCCC--CccccCCCCccCccee
Confidence 235666777663 33344443333 34899999999987544332 35555655543 222221 12233
Q ss_pred eEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCC---cceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 334 TAASHRGNHFFITRRSDELFNSELLACPVDNTS---ETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 334 ~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
..|.-||+.+++..-+. ....+|..++..... ....++.......+..++.+.+-|+++. .|...+..|.+-
T Consensus 770 i~wacdgr~viv~Gfdk-~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltG--KGD~~v~~yEv~ 844 (1012)
T KOG1445|consen 770 ILWACDGRIVIVVGFDK-SSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTG--KGDRFVNMYEVI 844 (1012)
T ss_pred EEEEecCcEEEEecccc-cchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEec--CCCceEEEEEec
Confidence 44777777655543322 223344444432211 0111111111222333444444444443 455566677654
No 325
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.37 E-value=3.2 Score=42.18 Aligned_cols=175 Identities=16% Similarity=0.224 Sum_probs=94.6
Q ss_pred CceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc--ceeEEEecCCeEEE
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVY 251 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~wspDg~l~y 251 (758)
+-++.+|...+... ..-+++..|+||-+.| |+....+ .+|.-++.++.-....++.+. ...++|.-+|.++.
T Consensus 71 ~y~~~i~akpi~g~--~~nvS~LTynp~~rtL-Fav~n~p---~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi 144 (316)
T COG3204 71 EYRARIDAKPILGE--TANVSSLTYNPDTRTL-FAVTNKP---AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVI 144 (316)
T ss_pred CceEEEeccccccc--cccccceeeCCCcceE-EEecCCC---ceEEEEecCCceEEEecccccCChhHeEEecCCEEEE
Confidence 34555565433322 2348899999999997 4443333 466666765433333355554 34588988886655
Q ss_pred EEeCCCCCCceEEEEEcCCCCC----Cc-EEEeeec---CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ce
Q 004368 252 ITMDEILRPDKAWLHKLEADQS----ND-ICLYHEK---DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL 322 (758)
Q Consensus 252 ~~~~~~~~~~~v~~~~l~~~~~----~~-~~v~~~~---~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~ 322 (758)
+.. |.++++.+.+..+.. +. .+.++.. +..| -+++|+|..+.+++ +..+....||.++..... ..
T Consensus 145 ~dE----R~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~Gf-EGlA~d~~~~~l~~-aKEr~P~~I~~~~~~~~~l~~ 218 (316)
T COG3204 145 VDE----RDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGF-EGLAWDPVDHRLFV-AKERNPIGIFEVTQSPSSLSV 218 (316)
T ss_pred Eeh----hcceEEEEEEcCCccEEeccceEEeccccCCCCcCc-eeeecCCCCceEEE-EEccCCcEEEEEecCCccccc
Confidence 432 334677777665421 11 1122221 3333 37899999888776 444556778887743311 11
Q ss_pred EEee-cc-c-----cce-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 323 RVLT-PR-V-----VGV-DTAASHRGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 323 ~~l~-~~-~-----~~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
.... +. . .++ ...+.+..++|++++.+. ..|..++.++
T Consensus 219 ~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ES----r~l~Evd~~G 264 (316)
T COG3204 219 HASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDES----RRLLEVDLSG 264 (316)
T ss_pred ccccCcccccceEeeccccceecCCCCcEEEEecCC----ceEEEEecCC
Confidence 1111 10 0 011 112555567788887765 3566666654
No 326
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.30 E-value=0.13 Score=52.14 Aligned_cols=46 Identities=17% Similarity=0.217 Sum_probs=39.0
Q ss_pred CCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 676 NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 676 ~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
.+| -|.+.+.+|..|++.+.+++++..++.|.+++...+. +.+|..
T Consensus 178 ~~p-~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~---~S~HV~ 223 (240)
T PF05705_consen 178 RCP-RLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFE---DSPHVA 223 (240)
T ss_pred CCC-eEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCC---CCchhh
Confidence 566 7888999999999999999999999999888777776 555643
No 327
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=95.19 E-value=2.7 Score=45.20 Aligned_cols=199 Identities=13% Similarity=0.107 Sum_probs=111.6
Q ss_pred eEEEeeEEECCCCC-EEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 190 FYSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 190 ~~~i~~~~~SPDG~-~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
+-+++++.+||..- -+|.+.+ ..+.+++..+-.+... .+.....++.|-.||+++......+ .|-..
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG----~V~vf 95 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESG----HVKVF 95 (487)
T ss_pred cCcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcC----cEEEe
Confidence 34688899999443 2344432 3455566656555442 4555666799999998876554332 25555
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceE-Eeeccccceee-EEeecCCEEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR-VLTPRVVGVDT-AASHRGNHFF 344 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~-~l~~~~~~~~~-~~s~dg~~l~ 344 (758)
++.+. .....+....... -.+.++|++..++.+.++.....+| |+++.. .+ .+....+-+.. .|+|..++++
T Consensus 96 D~k~r--~iLR~~~ah~apv-~~~~f~~~d~t~l~s~sDd~v~k~~--d~s~a~-v~~~l~~htDYVR~g~~~~~~~hiv 169 (487)
T KOG0310|consen 96 DMKSR--VILRQLYAHQAPV-HVTKFSPQDNTMLVSGSDDKVVKYW--DLSTAY-VQAELSGHTDYVRCGDISPANDHIV 169 (487)
T ss_pred ccccH--HHHHHHhhccCce-eEEEecccCCeEEEecCCCceEEEE--EcCCcE-EEEEecCCcceeEeeccccCCCeEE
Confidence 53331 1111222222111 1345889888877766655555555 555543 22 23333333333 3888888888
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCCCCCc
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEP 413 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~~g~~ 413 (758)
+....+ +.+-.+|.... ..|+..-+.+..++.+.+.+. .++..+ |-+.+.||++..+|+.
T Consensus 170 vtGsYD----g~vrl~DtR~~--~~~v~elnhg~pVe~vl~lpsgs~iasA---gGn~vkVWDl~~G~ql 230 (487)
T KOG0310|consen 170 VTGSYD----GKVRLWDTRSL--TSRVVELNHGCPVESVLALPSGSLIASA---GGNSVKVWDLTTGGQL 230 (487)
T ss_pred EecCCC----ceEEEEEeccC--CceeEEecCCCceeeEEEcCCCCEEEEc---CCCeEEEEEecCCcee
Confidence 876655 44555565442 245555555666788776654 554333 3366899999865553
No 328
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=95.17 E-value=0.061 Score=57.88 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=41.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCCeEEEEEe
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNEALVYITM 254 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg~l~y~~~ 254 (758)
.+..+.+||||++||-++.+ | .|+|+|.++.+.+.. ..-+..--+.|||||+++.+..
T Consensus 292 ~in~f~FS~DG~~LA~VSqD-G----fLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGG 351 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQD-G----FLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGG 351 (636)
T ss_pred cccceeEcCCCceEEEEecC-c----eEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecC
Confidence 78889999999999987653 3 699999988666542 1122234479999996555543
No 329
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=95.14 E-value=2.7 Score=45.25 Aligned_cols=223 Identities=12% Similarity=0.086 Sum_probs=114.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
+.+..|=.||+++| .|++...+.|+|.++...++ .+.. ......|+|++ +++-...|+. .+..+++
T Consensus 71 v~s~~fR~DG~Lla-----aGD~sG~V~vfD~k~r~iLR-~~~ah~apv~~~~f~~~d~t~l~s~sDd~----v~k~~d~ 140 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLA-----AGDESGHVKVFDMKSRVILR-QLYAHQAPVHVTKFSPQDNTMLVSGSDDK----VVKYWDL 140 (487)
T ss_pred eeEEEeecCCeEEE-----ccCCcCcEEEeccccHHHHH-HHhhccCceeEEEecccCCeEEEecCCCc----eEEEEEc
Confidence 55678889999998 46666789999976644433 2211 13446899988 6665555442 2445566
Q ss_pred CCCCCCcEEEeee-cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE-EeecCCEEEEE
Q 004368 269 EADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFIT 346 (758)
Q Consensus 269 ~~~~~~~~~v~~~-~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~ 346 (758)
.+.. + +++. ....+.-..+|+|-...|+++.+-.+.-++|-....+.. ...+ ....-++.. +-|.|..++-.
T Consensus 141 s~a~---v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~-v~el-nhg~pVe~vl~lpsgs~iasA 214 (487)
T KOG0310|consen 141 STAY---V-QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSR-VVEL-NHGCPVESVLALPSGSLIASA 214 (487)
T ss_pred CCcE---E-EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCce-eEEe-cCCCceeeEEEcCCCCEEEEc
Confidence 6542 2 3332 233444456799998899887666665555544444321 2222 222223332 44666644422
Q ss_pred EcCCCCCCcEEEEEeCCCCCccee-eecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcCCCCCccccccCCceee
Q 004368 347 RRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVE 424 (758)
Q Consensus 347 s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~ 424 (758)
+ + ..+-++|+-+++.... ...+ .-.+..+....+ ..++...-++. +.+|+... -.+ -..+.
T Consensus 215 ---g-G--n~vkVWDl~~G~qll~~~~~H--~KtVTcL~l~s~~~rLlS~sLD~~--VKVfd~t~--~Kv-----v~s~~ 277 (487)
T KOG0310|consen 215 ---G-G--NSVKVWDLTTGGQLLTSMFNH--NKTVTCLRLASDSTRLLSGSLDRH--VKVFDTTN--YKV-----VHSWK 277 (487)
T ss_pred ---C-C--CeEEEEEecCCceehhhhhcc--cceEEEEEeecCCceEeecccccc--eEEEEccc--eEE-----EEeee
Confidence 2 2 2355567654222111 1112 223344444332 22334444443 56776441 111 13445
Q ss_pred ccCcccccCCCCcccCCcEEEEEEecC
Q 004368 425 FIDPVYSIDPSESVFSSRILRFHYSSL 451 (758)
Q Consensus 425 ~p~~~~~i~~~~~~~d~~~l~~~~sS~ 451 (758)
+|.+.-+ ...++++.++++..++-
T Consensus 278 ~~~pvLs---iavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 278 YPGPVLS---IAVSPDDQTVVIGMSNG 301 (487)
T ss_pred cccceee---EEecCCCceEEEecccc
Confidence 6655333 33456777776655543
No 330
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.01 E-value=0.059 Score=54.09 Aligned_cols=96 Identities=13% Similarity=0.043 Sum_probs=56.6
Q ss_pred EEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHH-HHHHHHcCCCCCCc
Q 004368 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKEK 596 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~~ 596 (758)
.|+++|++.|.. ..|...+..+...++.|..+..+|.+.. .....+++++++. ++.+..... ...
T Consensus 2 ~lf~~p~~gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~~~----------~~~~~si~~la~~y~~~I~~~~~--~gp 67 (229)
T PF00975_consen 2 PLFCFPPAGGSA--SSYRPLARALPDDVIGVYGIEYPGRGDD----------EPPPDSIEELASRYAEAIRARQP--EGP 67 (229)
T ss_dssp EEEEESSTTCSG--GGGHHHHHHHTTTEEEEEEECSTTSCTT----------SHEESSHHHHHHHHHHHHHHHTS--SSS
T ss_pred eEEEEcCCccCH--HHHHHHHHhCCCCeEEEEEEecCCCCCC----------CCCCCCHHHHHHHHHHHhhhhCC--CCC
Confidence 567788866632 3355555555544588888988877521 1222445555553 334433321 238
Q ss_pred EEEEEeChhHHHHHHHHhh---CCCceeEEEEcC
Q 004368 597 LCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAV 627 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~---~p~~f~a~v~~~ 627 (758)
..++|+|+||.+|..++.+ .-.....+++..
T Consensus 68 ~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 68 YVLAGWSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred eeehccCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 9999999999998777764 222344555444
No 331
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=94.99 E-value=0.92 Score=44.53 Aligned_cols=185 Identities=15% Similarity=0.174 Sum_probs=99.4
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~ 267 (758)
-+...++|-|.++|. .|+..--|+|+|+...+.-+..+.+ .+..+.|.... .|+-.+.+. .|.+++
T Consensus 102 ivk~~af~~ds~~ll-----tgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~-----tVRLWD 171 (334)
T KOG0278|consen 102 IVKAVAFSQDSNYLL-----TGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK-----TVRLWD 171 (334)
T ss_pred eeeeEEecccchhhh-----ccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC-----ceEEEE
Confidence 455667777777665 2333446888888765544433333 24457887655 565443332 255566
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec--ccccee-eEEeecCCEEE
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP--RVVGVD-TAASHRGNHFF 344 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~--~~~~~~-~~~s~dg~~l~ 344 (758)
..++.. +.-++-+.+ .-+...|+||++|.+.-. +.|-.+|..+-. +|.. -.-++. .+.+|+. .+|
T Consensus 172 ~rTgt~--v~sL~~~s~--VtSlEvs~dG~ilTia~g----ssV~Fwdaksf~---~lKs~k~P~nV~SASL~P~k-~~f 239 (334)
T KOG0278|consen 172 HRTGTE--VQSLEFNSP--VTSLEVSQDGRILTIAYG----SSVKFWDAKSFG---LLKSYKMPCNVESASLHPKK-EFF 239 (334)
T ss_pred eccCcE--EEEEecCCC--CcceeeccCCCEEEEecC----ceeEEecccccc---ceeeccCccccccccccCCC-ceE
Confidence 666532 222222222 125678999999987543 335556665432 2221 122233 2377765 566
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCE-EEEEEEeCCeeEEE
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDH-LAVYEREGGLQKIT 403 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-l~~~~~~~g~~~l~ 403 (758)
+..+. .+.+++.|-.+. ...-....+....+-.+.+..+. ++...+++|.-+||
T Consensus 240 VaGge----d~~~~kfDy~Tg-eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlW 294 (334)
T KOG0278|consen 240 VAGGE----DFKVYKFDYNTG-EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLW 294 (334)
T ss_pred EecCc----ceEEEEEeccCC-ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEE
Confidence 65444 488999998763 22222222222334455555554 45566788875544
No 332
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.99 E-value=0.11 Score=56.14 Aligned_cols=116 Identities=20% Similarity=0.131 Sum_probs=77.5
Q ss_pred CCCEEEEecCCCccCCCC-CC-ChHHHHHHH-cCcEEEEEecCCCCCC---chhHHhcccccCCcChHhHHHHHHHHHHH
Q 004368 515 SDPLLLYGYGSYEICNDP-AF-NSSRLSLLD-RGFIFAIAQIRGGGEL---GRQWYENGKFLKKKNTFTDFIACAEYLIK 588 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~-~~-~~~~~~l~~-~G~~v~~~~~RG~g~~---G~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 588 (758)
..|+.|++-|-.-....| .. ...+..|+. .|-.|+....|-=|.. +..-....+...-.+.+.|+...|+.+..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 368888886521122122 11 223455655 5999999999954421 11111112233335678888888888866
Q ss_pred c-CCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCcc
Q 004368 589 N-CYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFV 630 (758)
Q Consensus 589 ~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~ 630 (758)
+ +.-|+.+...+|+||-|.|++++=..+|++..++|+.+..+
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 6 45666799999999999999999999999988888776643
No 333
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.95 E-value=0.19 Score=49.93 Aligned_cols=166 Identities=16% Similarity=0.074 Sum_probs=91.7
Q ss_pred EEEEecCCCccCCCCC--CChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 518 LLLYGYGSYEICNDPA--FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~--~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
.||..-||......|. |......|+++||+|+..-|.-+-.. +.. ....+..+..|.+.|.+.+..++.
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH---~~~------A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDH---QAI------AREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcH---HHH------HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 5666666644444443 44555788999999999988643221 111 122345677788888887655444
Q ss_pred --cEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccCCCCCCCChhh----hhccCCCCCHHHHHHHHhcCcc
Q 004368 596 --KLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTMLDPTIPLTTAE----WEEWGDPWKEEFYFYMKSYSPV 669 (758)
Q Consensus 596 --~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~~~~~~~~~~~----~~e~g~p~~~~~~~~l~~~sp~ 669 (758)
.+.-+|||+|+-+-+.+....+..-++-|+.+ |-| +-.+..+|+...- -.|| .|.-.+....+++.
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliS-FNN---~~a~~aIP~~~~l~~~l~~EF-~PsP~ET~~li~~~--- 160 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILIS-FNN---FPADEAIPLLEQLAPALRLEF-TPSPEETRRLIRES--- 160 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEe-cCC---hHHHhhCchHhhhccccccCc-cCCHHHHHHHHHHh---
Confidence 67789999999988777665543223323222 111 1112234432100 0122 23333344344431
Q ss_pred cccCCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCC
Q 004368 670 DNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKT 708 (758)
Q Consensus 670 ~~i~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~ 708 (758)
..+ +..|++-=.+|.. .|+..+.+.|+....
T Consensus 161 Y~~-----~rnLLIkF~~D~i---Dqt~~L~~~L~~r~~ 191 (250)
T PF07082_consen 161 YQV-----RRNLLIKFNDDDI---DQTDELEQILQQRFP 191 (250)
T ss_pred cCC-----ccceEEEecCCCc---cchHHHHHHHhhhcc
Confidence 122 3356666666643 599999999987643
No 334
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.94 E-value=0.06 Score=37.07 Aligned_cols=27 Identities=11% Similarity=0.118 Sum_probs=21.5
Q ss_pred eeEEEEcCCCcEEEEEecCC--cceEEEE
Q 004368 287 SLGLQASESKKFLFIASESK--ITRFVFY 313 (758)
Q Consensus 287 ~~~~~~S~Dg~~l~~~s~~~--~~~~l~~ 313 (758)
...+.|||||++|+|.+... +..+||+
T Consensus 11 ~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 11 DGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 44688999999999999887 7778874
No 335
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=94.93 E-value=0.51 Score=49.40 Aligned_cols=196 Identities=10% Similarity=0.032 Sum_probs=102.2
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-ccc-CcceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~-~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
..+..+.||+||.++. +.|.+ ..|.+|+..-..+... .-. ..+..++|||....|.+..+++ .+.+++.
T Consensus 139 s~Vr~m~ws~~g~wmi-SgD~g----G~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg----~ikiWdf 209 (464)
T KOG0284|consen 139 SPVRTMKWSHNGTWMI-SGDKG----GMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDG----TIKIWDF 209 (464)
T ss_pred ccceeEEEccCCCEEE-EcCCC----ceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCC----eEEEEec
Confidence 3678899999999975 33333 4688888765444322 111 2356689999764444544432 2444454
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s 347 (758)
-....+ .++....-. .-++.|.|... |+++.+. ++ -|-++|..++..+-.+.....-+. ..|.++|.+|+-.+
T Consensus 210 ~~~kee--~vL~GHgwd-VksvdWHP~kg-Liasgsk-Dn-lVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~s 283 (464)
T KOG0284|consen 210 RMPKEE--RVLRGHGWD-VKSVDWHPTKG-LIASGSK-DN-LVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGS 283 (464)
T ss_pred cCCchh--heeccCCCC-cceeccCCccc-eeEEccC-Cc-eeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEcc
Confidence 443222 333332211 22578999754 4443332 22 567778887652222323333232 34899997666554
Q ss_pred cCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 348 ~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
.+. -+-++|+..-.+....-.+..++.-..+.+....|+.+.-.+|. +..+.+.
T Consensus 284 kD~-----~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgs--vvh~~v~ 337 (464)
T KOG0284|consen 284 KDQ-----SCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGS--VVHWVVG 337 (464)
T ss_pred CCc-----eEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCc--eEEEecc
Confidence 432 34555664311111122244444444456666777666655665 3344443
No 336
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=94.87 E-value=1.2 Score=50.96 Aligned_cols=191 Identities=10% Similarity=0.055 Sum_probs=103.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
.|=++.||.++-+|--+.| -++++|++...+=+.. .-.+.+..++|.|-. .+|....- ..++.++.|-
T Consensus 371 DILDlSWSKn~fLLSSSMD------KTVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSL----D~KvRiWsI~ 440 (712)
T KOG0283|consen 371 DILDLSWSKNNFLLSSSMD------KTVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSL----DGKVRLWSIS 440 (712)
T ss_pred hheecccccCCeeEecccc------ccEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeeccc----ccceEEeecC
Confidence 5567889998877765554 5799999987765553 224457889999976 55444322 1246666775
Q ss_pred CCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC---ceE-Eee-------ccccceeeEEee
Q 004368 270 ADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELR-VLT-------PRVVGVDTAASH 338 (758)
Q Consensus 270 ~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~---~~~-~l~-------~~~~~~~~~~s~ 338 (758)
.. .+..+.+- ......+.++|||++.++.+-.+ .+++++..+-+ ... .+. .+.-|+++. .-
T Consensus 441 d~---~Vv~W~Dl-~~lITAvcy~PdGk~avIGt~~G---~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~-p~ 512 (712)
T KOG0283|consen 441 DK---KVVDWNDL-RDLITAVCYSPDGKGAVIGTFNG---YCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF-PG 512 (712)
T ss_pred cC---eeEeehhh-hhhheeEEeccCCceEEEEEecc---EEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec-CC
Confidence 32 33333332 23445678999999998876432 23333333322 000 000 112233332 11
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCCCCcceee--ecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVL--IPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+-+.+++.+|+. +|-.+|+.+......+ +..........|+.++++++... ++ ..+++|+++
T Consensus 513 ~~~~vLVTSnDS-----rIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s-eD--s~VYiW~~~ 576 (712)
T KOG0283|consen 513 DPDEVLVTSNDS-----RIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSAS-ED--SWVYIWKND 576 (712)
T ss_pred CCCeEEEecCCC-----ceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEee-cC--ceEEEEeCC
Confidence 223677777754 5656666321111111 11111122345667778887665 33 358899875
No 337
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.78 E-value=1 Score=50.89 Aligned_cols=193 Identities=19% Similarity=0.158 Sum_probs=100.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECC-----CCce---------eeccccCcceeEEEecCCeEEEEEe-CC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE-----TGTP---------VGKPLVGVTASVEWAGNEALVYITM-DE 256 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~-----~g~~---------~~~~~~~~~~~~~wspDg~l~y~~~-~~ 256 (758)
.+..++.+|||+..+-+. ...++.+||.+ .|.. +.+.+++-...+..||||+++.++. +.
T Consensus 456 aIWsi~~~pD~~g~vT~s-----aDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdn 530 (888)
T KOG0306|consen 456 AIWSISLSPDNKGFVTGS-----ADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDN 530 (888)
T ss_pred ceeeeeecCCCCceEEec-----CCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccC
Confidence 677889999999876332 23456555542 2222 1223455566689999996555544 32
Q ss_pred CCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE-
Q 004368 257 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA- 335 (758)
Q Consensus 257 ~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~- 335 (758)
. .+||. +++-. =-+.+|...=| ..++..|||++.|+-.+.+ .+-.+|=+|..+ -.+-+..+.+.+.+.
T Consensus 531 T---VkVyf--lDtlK-FflsLYGHkLP--V~smDIS~DSklivTgSAD-KnVKiWGLdFGD--CHKS~fAHdDSvm~V~ 599 (888)
T KOG0306|consen 531 T---VKVYF--LDTLK-FFLSLYGHKLP--VLSMDISPDSKLIVTGSAD-KNVKIWGLDFGD--CHKSFFAHDDSVMSVQ 599 (888)
T ss_pred e---EEEEE--eccee-eeeeecccccc--eeEEeccCCcCeEEeccCC-CceEEeccccch--hhhhhhcccCceeEEE
Confidence 2 23443 33331 12234433333 3356689999977654443 445677666643 123344454554433
Q ss_pred EeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 336 ~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
|-| ..+++|...++ .++-.+|.+.-...+.+-.+..++.-..+.+.|+++ +...++-. +++|...
T Consensus 600 F~P-~~~~FFt~gKD----~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~v-vs~shD~s--IRlwE~t 664 (888)
T KOG0306|consen 600 FLP-KTHLFFTCGKD----GKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFV-VSSSHDKS--IRLWERT 664 (888)
T ss_pred Ecc-cceeEEEecCc----ceEEeechhhhhhheeeccchheeeeeEEcCCCCeE-EeccCCce--eEeeecc
Confidence 667 56788887776 456666654322222233333232222333444444 34444433 5566544
No 338
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.75 E-value=0.084 Score=57.54 Aligned_cols=86 Identities=19% Similarity=0.164 Sum_probs=65.4
Q ss_pred CCCEEEEecCC-CccCCCCCCChHHHHHHH-cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHc---
Q 004368 515 SDPLLLYGYGS-YEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKN--- 589 (758)
Q Consensus 515 ~~P~vl~~hGg-~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--- 589 (758)
+.-+|+++||| |-.....+.......|+. .|.-++.+||.-..|- .-+...+++.-|.-|++++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEa-----------PFPRaleEv~fAYcW~inn~al 463 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEA-----------PFPRALEEVFFAYCWAINNCAL 463 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCC-----------CCCcHHHHHHHHHHHHhcCHHH
Confidence 45689999986 555667777777777765 6999999999876653 2345568888888898876
Q ss_pred -CCCCCCcEEEEEeChhHHHHHHH
Q 004368 590 -CYCTKEKLCIEGRSAGGLLIGAV 612 (758)
Q Consensus 590 -~~~d~~~i~i~G~S~GG~l~~~~ 612 (758)
|++ .+||++.|.|+||.+..-+
T Consensus 464 lG~T-gEriv~aGDSAGgNL~~~V 486 (880)
T KOG4388|consen 464 LGST-GERIVLAGDSAGGNLCFTV 486 (880)
T ss_pred hCcc-cceEEEeccCCCcceeehh
Confidence 554 6999999999999965433
No 339
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=94.68 E-value=0.87 Score=46.02 Aligned_cols=193 Identities=12% Similarity=0.206 Sum_probs=98.7
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC------------Cceee---c--cc-cCc--ceeEEEecCCeEEEEE
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET------------GTPVG---K--PL-VGV--TASVEWAGNEALVYIT 253 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~------------g~~~~---~--~~-~~~--~~~~~wspDg~l~y~~ 253 (758)
...++||||.++| .|+....|.|+|++- |...+ . ++ +.+ +..+.|.|-.+|+...
T Consensus 116 R~aafs~DG~lvA-----TGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~ 190 (430)
T KOG0640|consen 116 RAAAFSPDGSLVA-----TGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISG 190 (430)
T ss_pred eeeeeCCCCcEEE-----ccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEec
Confidence 4568999999998 466567899999861 11110 0 11 111 3457888887766654
Q ss_pred eCCCCCCceEEEEEcCCCCC-CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec---cc
Q 004368 254 MDEILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP---RV 329 (758)
Q Consensus 254 ~~~~~~~~~v~~~~l~~~~~-~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~---~~ 329 (758)
..+ ..|.+.++..... +.-.+|++..+ ..++++.|.|.+|++.... .-+.++|+.+- +.+.+ ..
T Consensus 191 srD----~tvKlFDfsK~saKrA~K~~qd~~~--vrsiSfHPsGefllvgTdH---p~~rlYdv~T~---QcfvsanPd~ 258 (430)
T KOG0640|consen 191 SRD----NTVKLFDFSKTSAKRAFKVFQDTEP--VRSISFHPSGEFLLVGTDH---PTLRLYDVNTY---QCFVSANPDD 258 (430)
T ss_pred cCC----CeEEEEecccHHHHHHHHHhhccce--eeeEeecCCCceEEEecCC---CceeEEeccce---eEeeecCccc
Confidence 432 2366666643321 12224443332 3467899999999885443 22445566553 22221 11
Q ss_pred ---cceee-EEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEE
Q 004368 330 ---VGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTY 405 (758)
Q Consensus 330 ---~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~ 405 (758)
+.+.. ..++.|+ +|+....+| .|-.+|--...-.+.+-.......+.+..+..+.-++..+ +-.+.+.+|
T Consensus 259 qht~ai~~V~Ys~t~~-lYvTaSkDG----~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsS-G~DS~vkLW 332 (430)
T KOG0640|consen 259 QHTGAITQVRYSSTGS-LYVTASKDG----AIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSS-GKDSTVKLW 332 (430)
T ss_pred ccccceeEEEecCCcc-EEEEeccCC----cEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeec-CCcceeeee
Confidence 11111 2566554 777777663 3444442110000111112223345555566655544433 223456778
Q ss_pred EcCC
Q 004368 406 RLPA 409 (758)
Q Consensus 406 ~l~~ 409 (758)
.+.+
T Consensus 333 Ei~t 336 (430)
T KOG0640|consen 333 EIST 336 (430)
T ss_pred eecC
Confidence 7764
No 340
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=94.67 E-value=1.9 Score=46.97 Aligned_cols=158 Identities=15% Similarity=0.146 Sum_probs=94.7
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC-cceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~ 272 (758)
..+.++|||+.+. ..+... ....+.++|-++++.......+ ...+++.+|||..+|+..... ..|...+..+..
T Consensus 119 ~~~~~~~~~~~vY-V~n~~~-~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~---~~v~vi~~~~~~ 193 (381)
T COG3391 119 VGLAVDPDGKYVY-VANAGN-GNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDD---NTVSVIDTSGNS 193 (381)
T ss_pred ceEEECCCCCEEE-EEeccc-CCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCC---CeEEEEeCCCcc
Confidence 4678999999974 444331 2468999999998887642112 235689999996556655222 236665643321
Q ss_pred CCcEEEee----ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe--eccc-cceeeEEeecCCEEEE
Q 004368 273 SNDICLYH----EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL--TPRV-VGVDTAASHRGNHFFI 345 (758)
Q Consensus 273 ~~~~~v~~----~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l--~~~~-~~~~~~~s~dg~~l~~ 345 (758)
...-. -.....-..+.+++||+++++.........+..+|..++. .... .... ....-..+|+|+.+|+
T Consensus 194 ---v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~-v~~~~~~~~~~~~~~v~~~p~g~~~yv 269 (381)
T COG3391 194 ---VVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN-VTATDLPVGSGAPRGVAVDPAGKAAYV 269 (381)
T ss_pred ---eeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCce-EEEeccccccCCCCceeECCCCCEEEE
Confidence 11000 0011111356799999998876655545688999998876 2221 1111 1122347899998888
Q ss_pred EEcCCCCCCcEEEEEeCCC
Q 004368 346 TRRSDELFNSELLACPVDN 364 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~ 364 (758)
..... ..+..+|...
T Consensus 270 ~~~~~----~~V~vid~~~ 284 (381)
T COG3391 270 ANSQG----GTVSVIDGAT 284 (381)
T ss_pred EecCC----CeEEEEeCCC
Confidence 76653 4677777654
No 341
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.60 E-value=5.5 Score=40.66 Aligned_cols=159 Identities=9% Similarity=0.004 Sum_probs=82.6
Q ss_pred ceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeC
Q 004368 238 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (758)
Q Consensus 238 ~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~ 316 (758)
..++++|+|| .++++..+ .....|+....+.. ...+.... -...++|+++|...++ ........++. +.
T Consensus 26 ~~s~AvS~dg~~~A~v~~~--~~~~~L~~~~~~~~---~~~~~~g~---~l~~PS~d~~g~~W~v-~~~~~~~~~~~-~~ 95 (253)
T PF10647_consen 26 VTSPAVSPDGSRVAAVSEG--DGGRSLYVGPAGGP---VRPVLTGG---SLTRPSWDPDGWVWTV-DDGSGGVRVVR-DS 95 (253)
T ss_pred ccceEECCCCCeEEEEEEc--CCCCEEEEEcCCCc---ceeeccCC---ccccccccCCCCEEEE-EcCCCceEEEE-ec
Confidence 4568999999 78888822 23346887766543 22332221 2346789999654444 33333333333 32
Q ss_pred CCCC-ceEEee-cccc-ce-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCC--CCCcceee-----ecCCCCceeeeEEE
Q 004368 317 SKPE-ELRVLT-PRVV-GV-DTAASHRGNHFFITRRSDELFNSELLACPVD--NTSETTVL-----IPHRESVKLQDIQL 385 (758)
Q Consensus 317 ~~~~-~~~~l~-~~~~-~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~--~~~~~~~l-----~~~~~~~~~~~~~~ 385 (758)
.++. ....+. .... .+ ...+||||.+++++...++ ..+|++.-+. +.+....+ +.......+.+++|
T Consensus 96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~--~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W 173 (253)
T PF10647_consen 96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGG--GGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAW 173 (253)
T ss_pred CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCC--CCeEEEEEEEeCCCCCcceeccceEecccccCcceeeee
Confidence 2333 122221 1111 23 3459999999999987653 3667766542 21211111 11112234567888
Q ss_pred eCC-EEEEEEEeCCeeEEEEEEcC
Q 004368 386 FID-HLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 386 ~~~-~l~~~~~~~g~~~l~v~~l~ 408 (758)
..+ .|++.....+......+..+
T Consensus 174 ~~~~~L~V~~~~~~~~~~~~v~~d 197 (253)
T PF10647_consen 174 SDDSTLVVLGRSAGGPVVRLVSVD 197 (253)
T ss_pred cCCCEEEEEeCCCCCceeEEEEcc
Confidence 764 56655555554433334444
No 342
>PLN02209 serine carboxypeptidase
Probab=94.60 E-value=0.19 Score=55.54 Aligned_cols=133 Identities=12% Similarity=0.127 Sum_probs=75.2
Q ss_pred CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCCh---------------------HHHHHHHcCcEEEEEec
Q 004368 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNS---------------------SRLSLLDRGFIFAIAQI 553 (758)
Q Consensus 495 dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~---------------------~~~~l~~~G~~v~~~~~ 553 (758)
.+..+.-|++.... . ....|+|++.-||||.+...+.-. .-..|.+. ..++.+|.
T Consensus 50 ~~~~lf~~f~es~~--~-~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDq 125 (437)
T PLN02209 50 ENVQFFYYFIKSDK--N-PQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQ 125 (437)
T ss_pred CCeEEEEEEEecCC--C-CCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecC
Confidence 35556555444332 2 245799999999999764421100 00133332 46778887
Q ss_pred CCCCCCchhHHhcccccCCcChHhHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHH----HHHhhC-----C-CceeE
Q 004368 554 RGGGELGRQWYENGKFLKKKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIG----AVLNMR-----P-DLFKA 622 (758)
Q Consensus 554 RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~----~~~~~~-----p-~~f~a 622 (758)
+-|.||...-.... ......+.+|+..+++ |+...+......+.|+|.||||.-+- .+..+. + =-+++
T Consensus 126 PvGtGfSy~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~G 204 (437)
T PLN02209 126 PVGSGFSYSKTPIE-RTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQG 204 (437)
T ss_pred CCCCCccCCCCCCC-ccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeee
Confidence 77666642111101 1111123466666554 44444444557899999999998433 332222 1 14789
Q ss_pred EEEcCCccch
Q 004368 623 AVAAVPFVDV 632 (758)
Q Consensus 623 ~v~~~~~~d~ 632 (758)
+++..|++|.
T Consensus 205 i~igng~td~ 214 (437)
T PLN02209 205 YVLGNPITHI 214 (437)
T ss_pred EEecCcccCh
Confidence 9999999885
No 343
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=94.59 E-value=1.7 Score=45.22 Aligned_cols=134 Identities=13% Similarity=0.092 Sum_probs=77.7
Q ss_pred EEEEEECCCCceeec--cc-cCcceeEEEecCC---eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEE
Q 004368 218 TVYVIDIETGTPVGK--PL-VGVTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQ 291 (758)
Q Consensus 218 ~l~v~dl~~g~~~~~--~~-~~~~~~~~wspDg---~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~ 291 (758)
+|||+|+.+-+.+.. +. ++..+-.++||.. .++|-. ..-..+|+++++-+- +.+........ -...++
T Consensus 107 ~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~---s~t~GdV~l~d~~nl--~~v~~I~aH~~-~lAala 180 (391)
T KOG2110|consen 107 SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPG---STTSGDVVLFDTINL--QPVNTINAHKG-PLAALA 180 (391)
T ss_pred cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecC---CCCCceEEEEEcccc--eeeeEEEecCC-ceeEEE
Confidence 599999999887752 22 2223445676654 566653 233456888887655 23444443332 234678
Q ss_pred EcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce---eeEEeecCCEEEEEEcCCCCCCcEEEEEeC
Q 004368 292 ASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---DTAASHRGNHFFITRRSDELFNSELLACPV 362 (758)
Q Consensus 292 ~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~---~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~ 362 (758)
+++||..|+-.+...+ -|.++...+++.+..+..+..-+ ...|++|++.|...++.+ .-++++++.
T Consensus 181 fs~~G~llATASeKGT--VIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te---TVHiFKL~~ 249 (391)
T KOG2110|consen 181 FSPDGTLLATASEKGT--VIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE---TVHIFKLEK 249 (391)
T ss_pred ECCCCCEEEEeccCce--EEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCC---eEEEEEecc
Confidence 9999998875544333 34445555554233332221111 123899999777777654 467777654
No 344
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.58 E-value=2 Score=48.46 Aligned_cols=194 Identities=11% Similarity=0.087 Sum_probs=103.3
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecC-----CeEEEEEeCCCCCCceE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGN-----EALVYITMDEILRPDKA 263 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspD-----g~l~y~~~~~~~~~~~v 263 (758)
+-.+.+..+++|+.-+.+... .-.+.|||+.+-+.+.. +......++...++ |.++|++..++ .+
T Consensus 192 ~S~vtsL~~~~d~~~~ls~~R-----Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g----~~ 262 (775)
T KOG0319|consen 192 KSAVTSLAFSEDSLELLSVGR-----DKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSG----VV 262 (775)
T ss_pred hhheeeeeeccCCceEEEecc-----CcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCc----eE
Confidence 346788999999988876654 24689999965443321 22222334566665 24667765443 23
Q ss_pred EEEEcCCCCCCcEEEeeec-CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee--eEEeecC
Q 004368 264 WLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRG 340 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~-~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg 340 (758)
...+..++. ........ .+.+.-......+++.+++++ ..+++++|.++....+.+....+.+. -++.|+.
T Consensus 263 ~~~d~es~~--~~~~~~~~~~~e~~~~~~~~~~~~~l~vta----eQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~ 336 (775)
T KOG0319|consen 263 QYWDSESGK--CVYKQRQSDSEEIDHLLAIESMSQLLLVTA----EQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEE 336 (775)
T ss_pred EEEecccch--hhhhhccCCchhhhcceeccccCceEEEEc----cceEEEEEccccEEehhhcCCchhheeeeecCCcc
Confidence 333443331 11110011 111111122345666666543 24578888876542223333222222 2478888
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEE-eCCEEEEEEEeCCeeEEEEEEcC
Q 004368 341 NHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQL-FIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 341 ~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+++++.||.. ..++| ++.+. .-.+++...+. +-+++. ..+.++.+...+.. +.+|+++
T Consensus 337 ~~laVATNs~---~lr~y--~~~~~--~c~ii~GH~e~-vlSL~~~~~g~llat~sKD~s--vilWr~~ 395 (775)
T KOG0319|consen 337 SHLAVATNSP---ELRLY--TLPTS--YCQIIPGHTEA-VLSLDVWSSGDLLATGSKDKS--VILWRLN 395 (775)
T ss_pred ceEEEEeCCC---ceEEE--ecCCC--ceEEEeCchhh-eeeeeecccCcEEEEecCCce--EEEEEec
Confidence 9999999975 46777 65542 22366554443 445553 33346666666665 5566664
No 345
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.58 E-value=5.9 Score=40.07 Aligned_cols=131 Identities=9% Similarity=0.064 Sum_probs=72.3
Q ss_pred EECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCC--eEEEEEeCCCCCCceEEEEEcCCCCCC
Q 004368 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE--ALVYITMDEILRPDKAWLHKLEADQSN 274 (758)
Q Consensus 197 ~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg--~l~y~~~~~~~~~~~v~~~~l~~~~~~ 274 (758)
..-+||++=+.+.+..|. -.....++...-+++++|-. .++|.+.+.. -.+..+..+.+ +
T Consensus 42 f~~~dgs~g~a~~~eaGk-------------~v~~~~lpaR~Hgi~~~p~~~ravafARrPGt----f~~vfD~~~~~-~ 103 (366)
T COG3490 42 FDARDGSFGAATLSEAGK-------------IVFATALPARGHGIAFHPALPRAVAFARRPGT----FAMVFDPNGAQ-E 103 (366)
T ss_pred eeccCCceeEEEEccCCc-------------eeeeeecccccCCeecCCCCcceEEEEecCCc----eEEEECCCCCc-C
Confidence 445666666665555552 11122333334458888887 5777765432 24455555443 2
Q ss_pred cEEEeeecCCceeeEEEEcCCCcEEEEEecCCcce--EEEEEeCCCCCceEEeec----cccceeeEEeecCCEEEEEE
Q 004368 275 DICLYHEKDDIYSLGLQASESKKFLFIASESKITR--FVFYLDVSKPEELRVLTP----RVVGVDTAASHRGNHFFITR 347 (758)
Q Consensus 275 ~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~--~l~~~d~~~~~~~~~l~~----~~~~~~~~~s~dg~~l~~~s 347 (758)
.+++....+-.|+-.-.+|+||++|+.+-++.+.+ -|=++|...+ .+.+-. ...-.+..|.+||+.+++.-
T Consensus 104 pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~--fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 104 PVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG--FQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred cEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc--cceecccccCCcCcceeEEecCCcEEEEeC
Confidence 44444444444554445999999999887775443 3445565532 333321 11223445899999777653
No 346
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=94.57 E-value=2.8 Score=44.82 Aligned_cols=58 Identities=10% Similarity=0.188 Sum_probs=42.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCCeEEEEEeCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITMDE 256 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg~l~y~~~~~ 256 (758)
+....-+|+|.+|+- |.+..+||+|.+.+|+.+.. +.. ...-+.||.||..++++..+
T Consensus 84 v~al~s~n~G~~l~a-----g~i~g~lYlWelssG~LL~v-~~aHYQ~ITcL~fs~dgs~iiTgskD 144 (476)
T KOG0646|consen 84 VHALASSNLGYFLLA-----GTISGNLYLWELSSGILLNV-LSAHYQSITCLKFSDDGSHIITGSKD 144 (476)
T ss_pred eeeeecCCCceEEEe-----ecccCcEEEEEeccccHHHH-HHhhccceeEEEEeCCCcEEEecCCC
Confidence 456677999999973 33556899999999998753 222 24567999999777776544
No 347
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=94.50 E-value=0.085 Score=45.55 Aligned_cols=58 Identities=29% Similarity=0.464 Sum_probs=41.2
Q ss_pred CeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHH
Q 004368 678 PHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLM 744 (758)
Q Consensus 678 P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 744 (758)
+|+||+.+++|+.+|+..++++.++|.. .+++... +.||+.......=..+. +.+||.
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~----s~lvt~~---g~gHg~~~~~s~C~~~~--v~~yl~ 92 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG----SRLVTVD---GAGHGVYAGGSPCVDKA--VDDYLL 92 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC----ceEEEEe---ccCcceecCCChHHHHH--HHHHHH
Confidence 4599999999999999999999998864 3567776 78998653222222222 456765
No 348
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=94.46 E-value=7.3 Score=40.65 Aligned_cols=187 Identities=12% Similarity=0.103 Sum_probs=95.4
Q ss_pred CEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeee
Q 004368 203 KLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE 281 (758)
Q Consensus 203 ~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~ 281 (758)
.+||+..-..+ ..+.+++.+.+...-. ..+...-.+....+ +++..-. .++|+|+|..-.--..+....
T Consensus 57 SLvaiV~~~qp---r~Lkv~~~Kk~~~ICe~~fpt~IL~VrmNr~-RLvV~Le------e~IyIydI~~MklLhTI~t~~ 126 (391)
T KOG2110|consen 57 SLVAIVSIKQP---RKLKVVHFKKKTTICEIFFPTSILAVRMNRK-RLVVCLE------ESIYIYDIKDMKLLHTIETTP 126 (391)
T ss_pred ceeEEEecCCC---ceEEEEEcccCceEEEEecCCceEEEEEccc-eEEEEEc------ccEEEEecccceeehhhhccC
Confidence 45555544333 4677777766554432 22322222333223 3333221 138999987652101111112
Q ss_pred cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEEEcCCCCCCcEEEE-
Q 004368 282 KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLA- 359 (758)
Q Consensus 282 ~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~- 359 (758)
+++.-.+.++.+.++.||++- .+.+..+|+++|+.+-.+...+..+...+.. .|+++|..|+-.+..+ .|.|
T Consensus 127 ~n~~gl~AlS~n~~n~ylAyp-~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKG-----TVIRV 200 (391)
T KOG2110|consen 127 PNPKGLCALSPNNANCYLAYP-GSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKG-----TVIRV 200 (391)
T ss_pred CCccceEeeccCCCCceEEec-CCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCc-----eEEEE
Confidence 334334455666777799885 3345678999998875523334444444443 3999999777665543 2333
Q ss_pred EeCCCCCcceeeecCC---CCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 360 CPVDNTSETTVLIPHR---ESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 360 ~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
..+.++. .+..-+ .-..+-++++..+.-++....+. ..++++.|+.
T Consensus 201 f~v~~G~---kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~T-eTVHiFKL~~ 249 (391)
T KOG2110|consen 201 FSVPEGQ---KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNT-ETVHIFKLEK 249 (391)
T ss_pred EEcCCcc---EeeeeeCCceeeEEEEEEECCCCCeEEEecCC-CeEEEEEecc
Confidence 3343311 111111 12345555666655555555444 3478888873
No 349
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=94.43 E-value=1.4 Score=46.32 Aligned_cols=135 Identities=14% Similarity=0.116 Sum_probs=80.9
Q ss_pred EEEEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCC-CChHHHHHHHcCcEEEEEecCC--CCCCch--
Q 004368 487 ERKWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-FNSSRLSLLDRGFIFAIAQIRG--GGELGR-- 561 (758)
Q Consensus 487 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~~~RG--~g~~G~-- 561 (758)
+.+++.. ++.++.+ |+.|... ....-+||++||-......++ ....+..|.++||..+.+..+. ......
T Consensus 63 e~~~L~~-~~~~fla-L~~~~~~---~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~ 137 (310)
T PF12048_consen 63 EVQWLQA-GEERFLA-LWRPANS---AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRA 137 (310)
T ss_pred hcEEeec-CCEEEEE-EEecccC---CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccC
Confidence 3444443 5566655 3555543 345779999998544333222 2345568889999999988775 110000
Q ss_pred ----hHHhccc---------------------ccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC
Q 004368 562 ----QWYENGK---------------------FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR 616 (758)
Q Consensus 562 ----~~~~~~~---------------------~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~ 616 (758)
.-..++. ......-+.-+.+++.++.+++. .+|+++|+..|++++..++...
T Consensus 138 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~ 214 (310)
T PF12048_consen 138 TEAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEK 214 (310)
T ss_pred CCCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcC
Confidence 0000000 01111233445667777777764 5699999999999999999987
Q ss_pred CC-ceeEEEEcCCc
Q 004368 617 PD-LFKAAVAAVPF 629 (758)
Q Consensus 617 p~-~f~a~v~~~~~ 629 (758)
+. ...+.|+.++.
T Consensus 215 ~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 215 PPPMPDALVLINAY 228 (310)
T ss_pred CCcccCeEEEEeCC
Confidence 64 36777776664
No 350
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=94.31 E-value=2.1 Score=46.09 Aligned_cols=122 Identities=15% Similarity=0.207 Sum_probs=81.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCc-ceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~-~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
++.-..+||--+.+.-+...+| .+.+||+.+..+.-- ..... ..++.|||-...++++. +...+++++++
T Consensus 166 svRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV---G~Dkki~~yD~ 238 (673)
T KOG4378|consen 166 SVRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV---GYDKKINIYDI 238 (673)
T ss_pred eEEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe---cccceEEEeec
Confidence 4456788999999988887776 688999987655421 11111 45689999993333332 12346999999
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeec
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTP 327 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~ 327 (758)
++....+.+.++.+ ...++++++|.+|++... ..+|+.+|+...+ ++..+..
T Consensus 239 ~s~~s~~~l~y~~P----lstvaf~~~G~~L~aG~s---~G~~i~YD~R~~k~Pv~v~sa 291 (673)
T KOG4378|consen 239 RSQASTDRLTYSHP----LSTVAFSECGTYLCAGNS---KGELIAYDMRSTKAPVAVRSA 291 (673)
T ss_pred ccccccceeeecCC----cceeeecCCceEEEeecC---CceEEEEecccCCCCceEeee
Confidence 98766677776543 236789999999877433 2478999997755 4444433
No 351
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=94.31 E-value=1.6 Score=45.84 Aligned_cols=152 Identities=11% Similarity=0.086 Sum_probs=75.5
Q ss_pred EEEeeEEECCCCCEEEEEEe-----CCC-CeEEEEEEEECCCCceeeccccC--cceeEEEecCCeEEEEEeCCCCCCce
Q 004368 191 YSVGCFQVSPDNKLVAYAED-----TKG-DEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEALVYITMDEILRPDK 262 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~-----~~G-~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~wspDg~l~y~~~~~~~~~~~ 262 (758)
.+.....+.|||++.+=... ... .+.-.||.+|..++.... .... +..+++|||||+.+|...-. ..+
T Consensus 111 ~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l-~~~~~~~~NGla~SpDg~tly~aDT~---~~~ 186 (307)
T COG3386 111 NRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRL-LDDDLTIPNGLAFSPDGKTLYVADTP---ANR 186 (307)
T ss_pred CCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEe-ecCcEEecCceEECCCCCEEEEEeCC---CCe
Confidence 44556788899887543332 111 122368888875444333 2221 35679999999544554322 235
Q ss_pred EEEEEcCC--CC-CC-c-EEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe-eccc-cceeeE
Q 004368 263 AWLHKLEA--DQ-SN-D-ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL-TPRV-VGVDTA 335 (758)
Q Consensus 263 v~~~~l~~--~~-~~-~-~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l-~~~~-~~~~~~ 335 (758)
+++..+.. +. .. . ...+.. .+..--+.....||.. .+ +...+...|-+++.++.. ...+ .+.. ...-.+
T Consensus 187 i~r~~~d~~~g~~~~~~~~~~~~~-~~G~PDG~~vDadG~l-w~-~a~~~g~~v~~~~pdG~l-~~~i~lP~~~~t~~~F 262 (307)
T COG3386 187 IHRYDLDPATGPIGGRRGFVDFDE-EPGLPDGMAVDADGNL-WV-AAVWGGGRVVRFNPDGKL-LGEIKLPVKRPTNPAF 262 (307)
T ss_pred EEEEecCcccCccCCcceEEEccC-CCCCCCceEEeCCCCE-EE-ecccCCceEEEECCCCcE-EEEEECCCCCCccceE
Confidence 77766642 11 11 1 112221 1111113345556653 22 333334567777777332 2222 2211 111223
Q ss_pred EeecCCEEEEEEcCC
Q 004368 336 ASHRGNHFFITRRSD 350 (758)
Q Consensus 336 ~s~dg~~l~~~s~~~ 350 (758)
-.++.+.||+.++..
T Consensus 263 gG~~~~~L~iTs~~~ 277 (307)
T COG3386 263 GGPDLNTLYITSARS 277 (307)
T ss_pred eCCCcCEEEEEecCC
Confidence 567788999988876
No 352
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=94.27 E-value=0.1 Score=52.04 Aligned_cols=74 Identities=19% Similarity=0.172 Sum_probs=46.7
Q ss_pred ecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCC----ceeEEEEc
Q 004368 552 QIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPD----LFKAAVAA 626 (758)
Q Consensus 552 ~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~ 626 (758)
=+||.......|.+........ .......|++|+.+.---.++.|.+.|||-||.+|..++...++ ++..++..
T Consensus 42 aFRGTd~t~~~W~ed~~~~~~~-~~~~q~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~f 119 (224)
T PF11187_consen 42 AFRGTDDTLVDWKEDFNMSFQD-ETPQQKSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSF 119 (224)
T ss_pred EEECCCCchhhHHHHHHhhcCC-CCHHHHHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEe
Confidence 3577766667787665443321 22334566777654422234579999999999999988887543 45555543
No 353
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=94.23 E-value=4.2 Score=42.49 Aligned_cols=190 Identities=17% Similarity=0.159 Sum_probs=107.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce-----------------------eec-cccC---cceeEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-----------------------VGK-PLVG---VTASVEW 243 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~-----------------------~~~-~~~~---~~~~~~w 243 (758)
..+..+...+||.+++ .|+....|.||+.++.+. .+. ++.+ ..+++.|
T Consensus 194 ~~V~sVsv~~sgtr~~-----SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w 268 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFC-----SGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW 268 (423)
T ss_pred cceeEEEecCCCCeEE-----eecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence 4677888999999987 355567888888322111 011 2232 3677999
Q ss_pred ecCCeEEEEE-eCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC--
Q 004368 244 AGNEALVYIT-MDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-- 320 (758)
Q Consensus 244 spDg~l~y~~-~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-- 320 (758)
++. ..+|.. .| +.+..+++.+++..+. +.. ..-+..++.+|..+.|+-.+. ...+.+.|..++.
T Consensus 269 ~d~-~v~yS~SwD-----HTIk~WDletg~~~~~-~~~---~ksl~~i~~~~~~~Ll~~gss---dr~irl~DPR~~~gs 335 (423)
T KOG0313|consen 269 SDA-TVIYSVSWD-----HTIKVWDLETGGLKST-LTT---NKSLNCISYSPLSKLLASGSS---DRHIRLWDPRTGDGS 335 (423)
T ss_pred cCC-CceEeeccc-----ceEEEEEeecccceee-eec---CcceeEeecccccceeeecCC---CCceeecCCCCCCCc
Confidence 884 444554 33 3477788887754332 222 223446788887766554322 2456777877655
Q ss_pred -ceEEeeccccceeeE-EeecCCEEEEEEcCCCCCCcEEEEEeCCCCCccee-eecCCCCceeeeEEEeCCEEEEEEEeC
Q 004368 321 -ELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREG 397 (758)
Q Consensus 321 -~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~ 397 (758)
....+..+...+... |+|-..+.++....+ ..+...|+......-- +..+ +..+-.+.|.+..+++....+
T Consensus 336 ~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D----~t~klWDvRS~k~plydI~~h--~DKvl~vdW~~~~~IvSGGaD 409 (423)
T KOG0313|consen 336 VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYD----NTVKLWDVRSTKAPLYDIAGH--NDKVLSVDWNEGGLIVSGGAD 409 (423)
T ss_pred eeEEeeecchhhhhheecCCCCceEEEEEecC----CeEEEEEeccCCCcceeeccC--CceEEEEeccCCceEEeccCc
Confidence 223344554444443 888777666655554 3456667655321111 3333 335667888877666655444
Q ss_pred CeeEEEEEE
Q 004368 398 GLQKITTYR 406 (758)
Q Consensus 398 g~~~l~v~~ 406 (758)
. +++++.
T Consensus 410 ~--~l~i~~ 416 (423)
T KOG0313|consen 410 N--KLRIFK 416 (423)
T ss_pred c--eEEEec
Confidence 3 455553
No 354
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.13 E-value=0.17 Score=55.83 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=74.9
Q ss_pred CeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCC-------CC--------------hHHHHHHHcCcEEEEEecC
Q 004368 496 GTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPA-------FN--------------SSRLSLLDRGFIFAIAQIR 554 (758)
Q Consensus 496 G~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~-------~~--------------~~~~~l~~~G~~v~~~~~R 554 (758)
+..+.-|++...+ . ....|+||+.-||||.+...+ +. ..-..|.+. ..++.+|.+
T Consensus 49 ~~~lfy~f~es~~--~-~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqP 124 (433)
T PLN03016 49 NVQFFYYFIKSEN--N-PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQP 124 (433)
T ss_pred CeEEEEEEEecCC--C-cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCC
Confidence 4556666554332 2 346799999999999764211 10 001233332 567788877
Q ss_pred CCCCCchhHHhcccccC-CcChHhHHHHHHH-HHHHcCCCCCCcEEEEEeChhHHHHHHHHh----hC-----C-CceeE
Q 004368 555 GGGELGRQWYENGKFLK-KKNTFTDFIACAE-YLIKNCYCTKEKLCIEGRSAGGLLIGAVLN----MR-----P-DLFKA 622 (758)
Q Consensus 555 G~g~~G~~~~~~~~~~~-~~~~~~D~~~~~~-~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~----~~-----p-~~f~a 622 (758)
-|.||... ....... ...+.+|+..++. |+...+......+.|.|.||||..+..++. .+ + =-+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 66665421 1111111 1122345655543 455554445678999999999984443332 22 1 14789
Q ss_pred EEEcCCccchh
Q 004368 623 AVAAVPFVDVL 633 (758)
Q Consensus 623 ~v~~~~~~d~~ 633 (758)
+++..|++|..
T Consensus 203 i~iGNg~t~~~ 213 (433)
T PLN03016 203 YMLGNPVTYMD 213 (433)
T ss_pred eEecCCCcCch
Confidence 99999988753
No 355
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=94.03 E-value=2.1 Score=44.42 Aligned_cols=117 Identities=16% Similarity=0.206 Sum_probs=68.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCC---eEEEEEeCC--------CC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE---ALVYITMDE--------IL 258 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg---~l~y~~~~~--------~~ 258 (758)
.+..++++-||..+|- ++...+|.+|-+++++-... ..+....-++|.|.. .+...+... ..
T Consensus 237 wvr~v~v~~DGti~As-----~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~S 311 (406)
T KOG0295|consen 237 WVRMVRVNQDGTIIAS-----CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGS 311 (406)
T ss_pred hEEEEEecCCeeEEEe-----cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeec
Confidence 4566789999999883 33356899999988843321 222234556787775 232222111 11
Q ss_pred CCceEEEEEcCCCCCCcEEEee-ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 259 RPDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 259 ~~~~v~~~~l~~~~~~~~~v~~-~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
+...+.++++.++ ..+++ .....+..+++++|.||||+-.+.+ .+ |.++|+.++.
T Consensus 312 rDktIk~wdv~tg----~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDD-kt--lrvwdl~~~~ 367 (406)
T KOG0295|consen 312 RDKTIKIWDVSTG----MCLFTLVGHDNWVRGVAFSPGGKYILSCADD-KT--LRVWDLKNLQ 367 (406)
T ss_pred ccceEEEEeccCC----eEEEEEecccceeeeeEEcCCCeEEEEEecC-Cc--EEEEEeccce
Confidence 2234566777776 23433 2345566789999999998654433 33 4455666543
No 356
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.02 E-value=0.45 Score=56.05 Aligned_cols=176 Identities=11% Similarity=0.121 Sum_probs=106.1
Q ss_pred CCceEEeecccccCCC----------CeEEEeeEEECCCCC-EEEEEEeCCCCeEEEEEEEECCCCceeeccc-----cC
Q 004368 173 PPEHLILDENVKAEGR----------GFYSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-----VG 236 (758)
Q Consensus 173 ~~~~vllD~n~~~~~~----------~~~~i~~~~~SPDG~-~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~-----~~ 236 (758)
++--+|.|++.+..+. -.-.+.+..|+|.+. .|| .|+...+|+|||+..-+. +-+. ..
T Consensus 89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLA-----SGa~~geI~iWDlnn~~t-P~~~~~~~~~~ 162 (1049)
T KOG0307|consen 89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLA-----SGADDGEILIWDLNKPET-PFTPGSQAPPS 162 (1049)
T ss_pred CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceee-----ccCCCCcEEEeccCCcCC-CCCCCCCCCcc
Confidence 4567888888762111 123566789999888 777 455567899999976221 1111 12
Q ss_pred cceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCce-eeEEEEcCCCcE-EEEEecCCcceEEEE
Q 004368 237 VTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIY-SLGLQASESKKF-LFIASESKITRFVFY 313 (758)
Q Consensus 237 ~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~S~Dg~~-l~~~s~~~~~~~l~~ 313 (758)
-+..++|...- .|+-..... + +..++||... +.++-+.+...+. ...+.|.||+.. |++.+++....-|-+
T Consensus 163 eI~~lsWNrkvqhILAS~s~s-g---~~~iWDlr~~--~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~Pviql 236 (1049)
T KOG0307|consen 163 EIKCLSWNRKVSHILASGSPS-G---RAVIWDLRKK--KPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQL 236 (1049)
T ss_pred cceEeccchhhhHHhhccCCC-C---CceeccccCC--CcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEe
Confidence 24457886554 555444332 1 2555677654 3444444433322 346789998865 455555555566667
Q ss_pred EeCCCCC-ceEEeeccccceee-EEeecCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 314 LDVSKPE-ELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 314 ~d~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
.|+.-.. +.+.++.+..|+.. .|.+.+.++++.+..+ .+++..+.++
T Consensus 237 WDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD----~~ii~wN~~t 285 (1049)
T KOG0307|consen 237 WDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKD----NRIICWNPNT 285 (1049)
T ss_pred ecccccCCchhhhcccccceeeeccCCCCchhhhcccCC----CCeeEecCCC
Confidence 7765443 45666666666554 4889888888887766 4677777665
No 357
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=93.88 E-value=2.1 Score=42.65 Aligned_cols=119 Identities=18% Similarity=0.145 Sum_probs=72.1
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC-------Ccee-eccc-cCcceeEEEecCC-eEEEEEeCCCCCC
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-------GTPV-GKPL-VGVTASVEWAGNE-ALVYITMDEILRP 260 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~-------g~~~-~~~~-~~~~~~~~wspDg-~l~y~~~~~~~~~ 260 (758)
..+....+|++|.++++..|..-+....|.++|+.. .++. .++. +.....+.|+|-+ .|++--.+
T Consensus 94 ~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~----- 168 (327)
T KOG0643|consen 94 SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHED----- 168 (327)
T ss_pred CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCC-----
Confidence 467788999999999999988766677899999873 3322 2221 2235568999999 56554322
Q ss_pred ceEEEEEcCCCCCCcEEEee-ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 261 DKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 261 ~~v~~~~l~~~~~~~~~v~~-~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
-.+-.+++.++. +++-. +....-.-++.+|+|..+.+ ++....+.. ++|..+-+
T Consensus 169 G~is~~da~~g~---~~v~s~~~h~~~Ind~q~s~d~T~Fi-T~s~Dttak--l~D~~tl~ 223 (327)
T KOG0643|consen 169 GSISIYDARTGK---ELVDSDEEHSSKINDLQFSRDRTYFI-TGSKDTTAK--LVDVRTLE 223 (327)
T ss_pred CcEEEEEcccCc---eeeechhhhccccccccccCCcceEE-ecccCccce--eeecccee
Confidence 247777777662 22211 11111223577899988754 444444444 44655533
No 358
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=93.85 E-value=0.33 Score=50.85 Aligned_cols=100 Identities=15% Similarity=0.086 Sum_probs=66.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCc-----ceeEEEecCC-eEEEEEeCCCCCCceEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV-----TASVEWAGNE-ALVYITMDEILRPDKAW 264 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~-----~~~~~wspDg-~l~y~~~~~~~~~~~v~ 264 (758)
.+.++.+|+||..|.-... ..++.++|+.+.+.... ..++. .+.+.||||| .++--+.+. .||
T Consensus 343 ~vtSl~ls~~g~~lLsssR-----Ddtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dg-----sv~ 412 (459)
T KOG0288|consen 343 RVTSLDLSMDGLELLSSSR-----DDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADG-----SVY 412 (459)
T ss_pred ceeeEeeccCCeEEeeecC-----CCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCC-----cEE
Confidence 6788899999998865432 24689999998887653 22221 4668999999 555444333 488
Q ss_pred EEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEE
Q 004368 265 LHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIA 302 (758)
Q Consensus 265 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~ 302 (758)
++.+.++.-+.++-....++. ..+++|+|.|++|+-.
T Consensus 413 iW~v~tgKlE~~l~~s~s~~a-I~s~~W~~sG~~Llsa 449 (459)
T KOG0288|consen 413 IWSVFTGKLEKVLSLSTSNAA-ITSLSWNPSGSGLLSA 449 (459)
T ss_pred EEEccCceEEEEeccCCCCcc-eEEEEEcCCCchhhcc
Confidence 889888744333332223332 3478899999998643
No 359
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=93.78 E-value=8.8 Score=39.05 Aligned_cols=195 Identities=15% Similarity=0.120 Sum_probs=91.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC-Cceeec---cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET-GTPVGK---PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~-g~~~~~---~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~ 267 (758)
+|+.++|||.-+.++.. |+...++++|++.. |..... ...+-.-.++|+.||..+|+..-+. ++.+++
T Consensus 29 sIS~l~FSP~~~~~~~A----~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk----~~k~wD 100 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAA----GSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDK----QAKLWD 100 (347)
T ss_pred chheeEeccccCceEEe----cccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCC----ceEEEE
Confidence 68889999943333322 44456789999876 444432 2333345589999995445543222 477779
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEE
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITR 347 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s 347 (758)
|.+++.. .+ ...+... -.+.|-+..-+=.+...+.+ .-|-.+|.....++..+ ...+..|..+---. ++++.
T Consensus 101 L~S~Q~~--~v-~~Hd~pv-kt~~wv~~~~~~cl~TGSWD-KTlKfWD~R~~~pv~t~--~LPeRvYa~Dv~~p-m~vVa 172 (347)
T KOG0647|consen 101 LASGQVS--QV-AAHDAPV-KTCHWVPGMNYQCLVTGSWD-KTLKFWDTRSSNPVATL--QLPERVYAADVLYP-MAVVA 172 (347)
T ss_pred ccCCCee--ee-eecccce-eEEEEecCCCcceeEecccc-cceeecccCCCCeeeee--eccceeeehhccCc-eeEEE
Confidence 9888542 22 2222221 13445554443223333322 22455666554312111 11222333222122 23332
Q ss_pred cCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC-EEEEEEEeCCeeEEEEEEcC
Q 004368 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 348 ~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~l~v~~l~ 408 (758)
..+ ..|..++|+++......+...-......++.+.| ..+.+..-+|. +.+..++
T Consensus 173 ta~----r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGr--v~iq~id 228 (347)
T KOG0647|consen 173 TAE----RHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGR--VAIQYID 228 (347)
T ss_pred ecC----CcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecce--EEEEecC
Confidence 222 3577777765322111222223344556655543 22234444454 3344454
No 360
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=93.69 E-value=13 Score=41.83 Aligned_cols=151 Identities=9% Similarity=0.063 Sum_probs=89.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecccc----CcceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV----GVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~----~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
+.++++|.+.+.||.+... | .|-+|++..+-.....+. ....+++|++.+++|-...+. .|..+++
T Consensus 28 I~slA~s~kS~~lAvsRt~-g----~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg-----~i~EwDl 97 (691)
T KOG2048|consen 28 IVSLAYSHKSNQLAVSRTD-G----NIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSG-----SITEWDL 97 (691)
T ss_pred eEEEEEeccCCceeeeccC-C----cEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCc-----eEEEEec
Confidence 5677889999999877653 3 578888877544432332 236679999666886554433 4777777
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeecccccee--eEEeecCCEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD--TAASHRGNHFFI 345 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~--~~~s~dg~~l~~ 345 (758)
-+. +....++. ...-..+++..|.+..+.+...+. -++.++...+. ....+..++.+.. ..|.++|.+++.
T Consensus 98 ~~l--k~~~~~d~-~gg~IWsiai~p~~~~l~IgcddG---vl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~ 171 (691)
T KOG2048|consen 98 HTL--KQKYNIDS-NGGAIWSIAINPENTILAIGCDDG---VLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAG 171 (691)
T ss_pred ccC--ceeEEecC-CCcceeEEEeCCccceEEeecCCc---eEEEEecCCceEEEEeecccccceEEEEEecCCccEEEe
Confidence 765 22333322 222233567788888888765543 55666655444 3334444443332 348888877764
Q ss_pred EEcCCCCCCcEEEEEeCCC
Q 004368 346 TRRSDELFNSELLACPVDN 364 (758)
Q Consensus 346 ~s~~~~~~~~~L~~~~~~~ 364 (758)
-+. .+.|...|+..
T Consensus 172 Gs~-----Dg~Iriwd~~~ 185 (691)
T KOG2048|consen 172 GSI-----DGVIRIWDVKS 185 (691)
T ss_pred ccc-----CceEEEEEcCC
Confidence 433 24455556544
No 361
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=93.65 E-value=2.3 Score=42.79 Aligned_cols=142 Identities=11% Similarity=0.152 Sum_probs=81.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee-ec-cc----cC--cceeEEEec--CC-eEEEEEeCCCCCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-GK-PL----VG--VTASVEWAG--NE-ALVYITMDEILRP 260 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-~~-~~----~~--~~~~~~wsp--Dg-~l~y~~~~~~~~~ 260 (758)
.+.-+.|-||+++||-..+ ..|.+|+++.+..+ .. .. +. ...+-+||| || .++- ..+.
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~---- 193 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT-TSDS---- 193 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE-eCCC----
Confidence 4677899999999997764 46888998876552 21 11 11 144568998 66 5544 3333
Q ss_pred ceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccceeeE-Eee
Q 004368 261 DKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDTA-ASH 338 (758)
Q Consensus 261 ~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~-~s~ 338 (758)
.++.+++.+... ..-.+........++.+.|..++++++..+.+.-++ +|....+ +++.+.+..-.+... +.|
T Consensus 194 -tl~~~D~RT~~~--~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvri--WD~R~tk~pv~el~~HsHWvW~VRfn~ 268 (370)
T KOG1007|consen 194 -TLQFWDLRTMKK--NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRI--WDTRKTKFPVQELPGHSHWVWAVRFNP 268 (370)
T ss_pred -cEEEEEccchhh--hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEE--EeccCCCccccccCCCceEEEEEEecC
Confidence 377777776522 222233333445567789999999888776665444 4665544 344443332222222 444
Q ss_pred cCCEEEEEEcC
Q 004368 339 RGNHFFITRRS 349 (758)
Q Consensus 339 dg~~l~~~s~~ 349 (758)
--+.|++....
T Consensus 269 ~hdqLiLs~~S 279 (370)
T KOG1007|consen 269 EHDQLILSGGS 279 (370)
T ss_pred ccceEEEecCC
Confidence 44555554443
No 362
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.64 E-value=0.42 Score=52.47 Aligned_cols=141 Identities=16% Similarity=0.077 Sum_probs=85.0
Q ss_pred EEeeCCCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHH---------HHHH------cCcEEEEEec
Q 004368 489 KWASASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRL---------SLLD------RGFIFAIAQI 553 (758)
Q Consensus 489 ~~~~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~---------~l~~------~G~~v~~~~~ 553 (758)
+.+.-..|..+..|++--... ....|+||+.-||||.+...+...+.- .|.. +=-.++..|.
T Consensus 49 v~v~~~~~~~LFYwf~eS~~~---P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESENN---PETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred EECCCCCCceEEEEEEEccCC---CCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 444444677888876654422 345799999999999765433222111 0110 1134677777
Q ss_pred CCCCCCchhHHhcccccCCcChHhHHHH-HHHHHHHcCCCCCCcEEEEEeChhHHH----HHHHHhhC-----C-CceeE
Q 004368 554 RGGGELGRQWYENGKFLKKKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLL----IGAVLNMR-----P-DLFKA 622 (758)
Q Consensus 554 RG~g~~G~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~~i~i~G~S~GG~l----~~~~~~~~-----p-~~f~a 622 (758)
+-|.||.-.-........-..+.+|+.. ..+|+.+.+.-..+.+.|.|.||+|.- |..+...+ | =-+++
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 7666554321111111222334456555 457888887777899999999999974 44444433 1 24799
Q ss_pred EEEcCCccch
Q 004368 623 AVAAVPFVDV 632 (758)
Q Consensus 623 ~v~~~~~~d~ 632 (758)
.++..|++|.
T Consensus 206 ~~IGNg~td~ 215 (454)
T KOG1282|consen 206 YAIGNGLTDP 215 (454)
T ss_pred EEecCcccCc
Confidence 9999999884
No 363
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=93.63 E-value=2 Score=50.15 Aligned_cols=100 Identities=16% Similarity=0.077 Sum_probs=61.8
Q ss_pred EEEeeEEECCCCCEEEEEEeC-CC---CeEEEEEEEECCCCceeeccccCcceeEEEecCC-eEEEEEeCCCCCCceEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDT-KG---DEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWL 265 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~-~G---~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~ 265 (758)
..++.+.++|+|+.++|..+. +. .....+|+.|..+ ............+.||||| .+++.. ....+..++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~spdg~~~~~~~-~~~~~~~~l~l 89 (620)
T COG1506 13 ARVSDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT--VRLLTFGGGVSELRWSPDGSVLAFVS-TDGGRVAQLYL 89 (620)
T ss_pred hcccCcccCCCCceeEEeeccccccccccccceEEEeccc--ccccccCCcccccccCCCCCEEEEEe-ccCCCcceEEE
Confidence 356778999999999999875 21 1235688877655 2222333345668999999 677766 33344667888
Q ss_pred EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEE
Q 004368 266 HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFI 301 (758)
Q Consensus 266 ~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~ 301 (758)
..++ + ....+... .....|+++|+.+++
T Consensus 90 ~~~~-g---~~~~~~~~----v~~~~~~~~g~~~~~ 117 (620)
T COG1506 90 VDVG-G---LITKTAFG----VSDARWSPDGDRIAF 117 (620)
T ss_pred EecC-C---ceeeeecc----cccceeCCCCCeEEE
Confidence 7766 3 11111111 113458888888777
No 364
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=93.54 E-value=6.1 Score=47.54 Aligned_cols=205 Identities=14% Similarity=0.128 Sum_probs=98.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCC-------CC--
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEIL-------RP-- 260 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~-------~~-- 260 (758)
.+-++.+--|+..|.+... .| +|.+.|.++....-. .+++.+..++||||. .++.++..... .+
T Consensus 70 ~i~s~~fl~d~~~i~v~~~-~G----~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~ 144 (1265)
T KOG1920|consen 70 EIVSVQFLADTNSICVITA-LG----DIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIA 144 (1265)
T ss_pred ceEEEEEecccceEEEEec-CC----cEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchh
Confidence 4555566666666655443 23 466667777654432 344446668999999 66666543210 00
Q ss_pred -ceE--------EEEEcCCCCCCcEEEeee--------------c------CCceeeEEEEcCCCcEEEEEecC--Ccce
Q 004368 261 -DKA--------WLHKLEADQSNDICLYHE--------------K------DDIYSLGLQASESKKFLFIASES--KITR 309 (758)
Q Consensus 261 -~~v--------~~~~l~~~~~~~~~v~~~--------------~------~~~~~~~~~~S~Dg~~l~~~s~~--~~~~ 309 (758)
..+ -..++|=+ +...-|.+ . -...-.+++|--||++++++... .+..
T Consensus 145 E~~L~~d~~~~sk~v~VGwG--rkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~R 222 (1265)
T KOG1920|consen 145 EKPLDADDERKSKFVNVGWG--RKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTR 222 (1265)
T ss_pred ccccccccccccccceeccc--ccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCce
Confidence 000 00111111 11111110 0 00112348899999999887643 2336
Q ss_pred EEEEEeCCCCCceEEeeccccce--eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCce-eeeEEEe
Q 004368 310 FVFYLDVSKPEELRVLTPRVVGV--DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVK-LQDIQLF 386 (758)
Q Consensus 310 ~l~~~d~~~~~~~~~l~~~~~~~--~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 386 (758)
.+-++|.+ +. +.-......+. ...|-|.|..++..-... . ..+|....-++-....-+++...+.. .+++.|.
T Consensus 223 kirV~drE-g~-Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~-s-d~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wn 298 (1265)
T KOG1920|consen 223 KIRVYDRE-GA-LNSTSEPVEGLQHSLSWKPSGSLIAAIQCKT-S-DSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWN 298 (1265)
T ss_pred eEEEeccc-ch-hhcccCcccccccceeecCCCCeEeeeeecC-C-CCcEEEEecCCccccccccCCcccccchheeeec
Confidence 77778876 33 32222222222 234888887766554433 1 23566555443211222333333333 5666665
Q ss_pred CC--EEEEEEEeCCeeEEEEEEc
Q 004368 387 ID--HLAVYEREGGLQKITTYRL 407 (758)
Q Consensus 387 ~~--~l~~~~~~~g~~~l~v~~l 407 (758)
.+ -|++........++.+|..
T Consensus 299 s~sdiLAv~~~~~e~~~v~lwt~ 321 (1265)
T KOG1920|consen 299 SNSDILAVVTSNLENSLVQLWTT 321 (1265)
T ss_pred CCCCceeeeecccccceEEEEEe
Confidence 43 3333222222333555543
No 365
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=93.46 E-value=0.2 Score=51.06 Aligned_cols=235 Identities=15% Similarity=0.206 Sum_probs=116.6
Q ss_pred eCCCCeEEEEEEEeeccccccCCCCCEEEEecCC-Cc--cCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhccc
Q 004368 492 SASDGTQIPICIVYRKNLVKLDGSDPLLLYGYGS-YE--ICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGK 568 (758)
Q Consensus 492 ~s~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg-~~--~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~ 568 (758)
++.-| .|.+.+. + +++++.|+||..|-- .+ ++....|.......+...+.++=+|.+|+.+-......
T Consensus 5 ~t~~G-~v~V~v~---G--~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~--- 75 (283)
T PF03096_consen 5 ETPYG-SVHVTVQ---G--DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPE--- 75 (283)
T ss_dssp EETTE-EEEEEEE---S--S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----T---
T ss_pred ccCce-EEEEEEE---e--cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccc---
Confidence 34445 4666543 1 233468999999962 11 11223344445555667899999999998763332221
Q ss_pred ccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCc------cchhhccCC----
Q 004368 569 FLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPF------VDVLTTMLD---- 638 (758)
Q Consensus 569 ~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~------~d~~~~~~~---- 638 (758)
.....+++++.+.+..+.+.-.+ +.+..+|--+|+++....+..+|+++-+.|+..|. .+|...-..
T Consensus 76 -~y~yPsmd~LAe~l~~Vl~~f~l--k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L 152 (283)
T PF03096_consen 76 -GYQYPSMDQLAEMLPEVLDHFGL--KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLL 152 (283)
T ss_dssp -T-----HHHHHCTHHHHHHHHT-----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH----
T ss_pred -cccccCHHHHHHHHHHHHHhCCc--cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhcccc
Confidence 22345566766666665554323 67999999999999999999999999999988764 333221000
Q ss_pred CCCCCC--hhhh---hccC------CCCCHHHH-HHHHh-cCc---------------c-cccCCCCCCeEEEeccCCCC
Q 004368 639 PTIPLT--TAEW---EEWG------DPWKEEFY-FYMKS-YSP---------------V-DNVKAQNYPHILVTAGLNDP 689 (758)
Q Consensus 639 ~~~~~~--~~~~---~e~g------~p~~~~~~-~~l~~-~sp---------------~-~~i~~~~~P~~Li~~G~~D~ 689 (758)
....++ ..+| .-|| +++.-..| +.+.+ .+| + ...+...+| +|++.|.+-+
T Consensus 153 ~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~-vLlvvG~~Sp 231 (283)
T PF03096_consen 153 YSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCP-VLLVVGDNSP 231 (283)
T ss_dssp ---CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS--EEEEEETTST
T ss_pred cccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCC-eEEEEecCCc
Confidence 001111 1111 1122 11111111 12221 222 1 222334787 8888899876
Q ss_pred CCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCC
Q 004368 690 RVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSM 749 (758)
Q Consensus 690 ~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 749 (758)
.+ .++.++..+|-..+ . -+++.. +.|=. ...++-...+..+.+|.+=+|.
T Consensus 232 ~~--~~vv~~ns~Ldp~~--t--tllkv~-dcGgl---V~eEqP~klaea~~lFlQG~G~ 281 (283)
T PF03096_consen 232 HV--DDVVEMNSKLDPTK--T--TLLKVA-DCGGL---VLEEQPGKLAEAFKLFLQGMGY 281 (283)
T ss_dssp TH--HHHHHHHHHS-CCC--E--EEEEET-T-TT----HHHH-HHHHHHHHHHHHHHTTB
T ss_pred ch--hhHHHHHhhcCccc--c--eEEEec-ccCCc---ccccCcHHHHHHHHHHHccCCc
Confidence 44 47788888885432 3 344432 55432 2334444555567777776653
No 366
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=93.42 E-value=3.6 Score=41.75 Aligned_cols=117 Identities=12% Similarity=0.085 Sum_probs=69.7
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-----cccCcceeEEEecCCeEEEEEeCCCCCCceEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PLVGVTASVEWAGNEALVYITMDEILRPDKAW 264 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-----~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~ 264 (758)
..-+.++++.|.|.+|+...+ ...++++|++|-+-..- ...+.+..+.+|+.|.+|.+...++ . +.
T Consensus 216 ~~~vrsiSfHPsGefllvgTd-----Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG--~--Ik 286 (430)
T KOG0640|consen 216 TEPVRSISFHPSGEFLLVGTD-----HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDG--A--IK 286 (430)
T ss_pred cceeeeEeecCCCceEEEecC-----CCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCC--c--EE
Confidence 446788899999999997554 56899999988654321 2233466789999998887776443 2 33
Q ss_pred EEEcCCCCCCcEEEeeec-CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 265 LHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 265 ~~~l~~~~~~~~~v~~~~-~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
+++=-++ +=+..+.+. +..-.++..++++||||+- +... +-++++.+.++.
T Consensus 287 lwDGVS~--rCv~t~~~AH~gsevcSa~Ftkn~kyiLs-SG~D--S~vkLWEi~t~R 338 (430)
T KOG0640|consen 287 LWDGVSN--RCVRTIGNAHGGSEVCSAVFTKNGKYILS-SGKD--STVKLWEISTGR 338 (430)
T ss_pred eeccccH--HHHHHHHhhcCCceeeeEEEccCCeEEee-cCCc--ceeeeeeecCCc
Confidence 3331111 111122222 2333456779999999763 3322 334455555544
No 367
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.34 E-value=0.22 Score=51.91 Aligned_cols=108 Identities=17% Similarity=0.151 Sum_probs=64.8
Q ss_pred CCCEEEEecCCCccCCCCCCChHHHHHHHcCcEE----EEEecCCCC-CCchhHHhcccccCCcChHhHHHHHHHHHHHc
Q 004368 515 SDPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIF----AIAQIRGGG-ELGRQWYENGKFLKKKNTFTDFIACAEYLIKN 589 (758)
Q Consensus 515 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v----~~~~~RG~g-~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 589 (758)
..-++|++|| |+.+....-...++..-+.|+-. +..--+|.- +|.. .++.-..+-.++...+.+|.+.
T Consensus 115 ~k~vlvFvHG-fNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~------DreS~~~Sr~aLe~~lr~La~~ 187 (377)
T COG4782 115 AKTVLVFVHG-FNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY------DRESTNYSRPALERLLRYLATD 187 (377)
T ss_pred CCeEEEEEcc-cCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc------chhhhhhhHHHHHHHHHHHHhC
Confidence 3468999999 55443322222233333444332 222223221 2211 1122234567889999999988
Q ss_pred CCCCCCcEEEEEeChhHHHHHHHHhh--------CCCceeEEEEcCCccc
Q 004368 590 CYCTKEKLCIEGRSAGGLLIGAVLNM--------RPDLFKAAVAAVPFVD 631 (758)
Q Consensus 590 ~~~d~~~i~i~G~S~GG~l~~~~~~~--------~p~~f~a~v~~~~~~d 631 (758)
.-. ++|-|+.||||.++++.++.| -+..++-+|+.+|=.|
T Consensus 188 ~~~--~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 188 KPV--KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred CCC--ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 753 899999999999998777654 1235778888888555
No 368
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=93.34 E-value=2.3 Score=41.92 Aligned_cols=118 Identities=14% Similarity=0.063 Sum_probs=63.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCC--------------
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDE-------------- 256 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~-------------- 256 (758)
.|....|-...+.|.-+.+ .-++++||..+|+.++. .++....+++.++||.|+-++...
T Consensus 145 ~Ir~v~wc~eD~~iLSSad-----d~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lK 219 (334)
T KOG0278|consen 145 GIRTVLWCHEDKCILSSAD-----DKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLK 219 (334)
T ss_pred cceeEEEeccCceEEeecc-----CCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEecccccccee
Confidence 4555555444444432222 34799999999998763 344445668889998433332211
Q ss_pred ----------------------CCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEE
Q 004368 257 ----------------------ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYL 314 (758)
Q Consensus 257 ----------------------~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~ 314 (758)
+++...+|.++..++ +++-.+......-...+.+||||..-+. .+..++-+||..
T Consensus 220 s~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tg--eEi~~~nkgh~gpVhcVrFSPdGE~yAs-GSEDGTirlWQt 296 (334)
T KOG0278|consen 220 SYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTG--EEIGSYNKGHFGPVHCVRFSPDGELYAS-GSEDGTIRLWQT 296 (334)
T ss_pred eccCccccccccccCCCceEEecCcceEEEEEeccCC--ceeeecccCCCCceEEEEECCCCceeec-cCCCceEEEEEe
Confidence 012334555555555 3333332222233345778888864322 233455667766
Q ss_pred eCC
Q 004368 315 DVS 317 (758)
Q Consensus 315 d~~ 317 (758)
...
T Consensus 297 ~~~ 299 (334)
T KOG0278|consen 297 TPG 299 (334)
T ss_pred cCC
Confidence 553
No 369
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=93.15 E-value=3.3 Score=46.82 Aligned_cols=155 Identities=12% Similarity=0.108 Sum_probs=81.1
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce-eecccc---CcceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGKPLV---GVTASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~-~~~~~~---~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
+.-+.++||++|+.|+-.. | ..|-+.|+++++. .+.... .....+.-+||+..+|+.... ..+..+
T Consensus 20 YtGG~~~~s~nG~~L~t~~---~---d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs----~llrv~ 89 (775)
T KOG0319|consen 20 YTGGPVAWSSNGQHLYTAC---G---DRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRS----QLLRVW 89 (775)
T ss_pred ecCCceeECCCCCEEEEec---C---ceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeecc----ceEEEE
Confidence 4445689999999997544 3 3588899999988 332111 225668899999444444332 235555
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE--EeecCCEEE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA--ASHRGNHFF 344 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~--~s~dg~~l~ 344 (758)
.+.++. -...+-.....-.+..+++|-| .|+-+....+ .+-++|...+.-...+. +.+|+... |.|+-.+..
T Consensus 90 ~L~tgk--~irswKa~He~Pvi~ma~~~~g-~LlAtggaD~--~v~VWdi~~~~~th~fk-G~gGvVssl~F~~~~~~~l 163 (775)
T KOG0319|consen 90 SLPTGK--LIRSWKAIHEAPVITMAFDPTG-TLLATGGADG--RVKVWDIKNGYCTHSFK-GHGGVVSSLLFHPHWNRWL 163 (775)
T ss_pred Ecccch--HhHhHhhccCCCeEEEEEcCCC-ceEEeccccc--eEEEEEeeCCEEEEEec-CCCceEEEEEeCCccchhh
Confidence 666652 2212211111122345678888 4433333333 34455665543122232 22333322 545444433
Q ss_pred EEEcCCCCCCcEEEEEeCCC
Q 004368 345 ITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~ 364 (758)
+.+. +++..+..+++..
T Consensus 164 L~sg---~~D~~v~vwnl~~ 180 (775)
T KOG0319|consen 164 LASG---ATDGTVRVWNLND 180 (775)
T ss_pred eeec---CCCceEEEEEccc
Confidence 3333 3346777788764
No 370
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=93.09 E-value=3 Score=43.91 Aligned_cols=106 Identities=13% Similarity=0.099 Sum_probs=61.8
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC--cceeEEEecCC-eEEEEEeCCCCCCc------eE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPD------KA 263 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~wspDg-~l~y~~~~~~~~~~------~v 263 (758)
+....||||+.++++.+- ...++++|+..|.......+. ...+++|.|-+ .+.-.+.++..+.. .+
T Consensus 126 iydL~Ws~d~~~l~s~s~-----dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~ 200 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGSV-----DNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI 200 (434)
T ss_pred hhhhhccCCCceeeeeec-----cceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeee
Confidence 456789999999987653 367999999999887642222 25668998887 44444433311111 11
Q ss_pred EEEE-------cCCC-CCCcEEEeee-cCCceeeEEEEcCCCcEEEEEe
Q 004368 264 WLHK-------LEAD-QSNDICLYHE-KDDIYSLGLQASESKKFLFIAS 303 (758)
Q Consensus 264 ~~~~-------l~~~-~~~~~~v~~~-~~~~~~~~~~~S~Dg~~l~~~s 303 (758)
+++. .+.. .+.-..+|.+ .-+.|+...+|||||..++.-+
T Consensus 201 ~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPa 249 (434)
T KOG1009|consen 201 KRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPA 249 (434)
T ss_pred eeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccc
Confidence 1111 1111 1112223332 2345676789999999877544
No 371
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.02 E-value=10 Score=37.64 Aligned_cols=164 Identities=15% Similarity=0.176 Sum_probs=84.1
Q ss_pred eeEEEec--CCeEEEEEeC--CCCCCceEEEEEcCCCCCC-cEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEE
Q 004368 239 ASVEWAG--NEALVYITMD--EILRPDKAWLHKLEADQSN-DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFY 313 (758)
Q Consensus 239 ~~~~wsp--Dg~l~y~~~~--~~~~~~~v~~~~l~~~~~~-~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~ 313 (758)
.++.||| +++|+..+.. .-...-+++++++..++.- ...-|+-.|. ..++.||+.-.-+++.....++-+||
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~--LfdV~Wse~~e~~~~~a~GDGSLrl~- 88 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDG--LFDVAWSENHENQVIAASGDGSLRLF- 88 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccc--eeEeeecCCCcceEEEEecCceEEEe-
Confidence 3478888 4565544321 1223446899888633221 1112333333 34789999988888877766666665
Q ss_pred EeCCCCC-ceEEeeccccceee-EEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEE
Q 004368 314 LDVSKPE-ELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLA 391 (758)
Q Consensus 314 ~d~~~~~-~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~ 391 (758)
|+.-+. +++.+......+.. .|..-.+..++.+.-+ ..-+|+..+... .......+..-+.-..+++.-..++
T Consensus 89 -d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD--~TiKLW~~~r~~--Sv~Tf~gh~~~Iy~a~~sp~~~nlf 163 (311)
T KOG0277|consen 89 -DLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWD--GTIKLWDPNRPN--SVQTFNGHNSCIYQAAFSPHIPNLF 163 (311)
T ss_pred -ccCCCCcchhHHHhhhhheEEeccccccceeEEeeccC--CceEeecCCCCc--ceEeecCCccEEEEEecCCCCCCeE
Confidence 443332 34444444333332 2555555555555433 246777655432 1121222221111122344444566
Q ss_pred EEEEeCCeeEEEEEEcCCCCC
Q 004368 392 VYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 392 ~~~~~~g~~~l~v~~l~~~g~ 412 (758)
...+.++. +.+++++..|+
T Consensus 164 as~Sgd~~--l~lwdvr~~gk 182 (311)
T KOG0277|consen 164 ASASGDGT--LRLWDVRSPGK 182 (311)
T ss_pred EEccCCce--EEEEEecCCCc
Confidence 66666665 66777776565
No 372
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=92.80 E-value=0.42 Score=54.41 Aligned_cols=57 Identities=19% Similarity=0.218 Sum_probs=43.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYIT 253 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~ 253 (758)
.+.++.+|||||||+-..- ...|++||+.+|....- .++....++.+||.|.++.+.
T Consensus 578 ritd~~FS~DgrWlisasm-----D~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~ 635 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISASM-----DSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATV 635 (910)
T ss_pred ceeeeEeCCCCcEEEEeec-----CCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEE
Confidence 6889999999999986654 25799999999988753 344445569999999443343
No 373
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=92.75 E-value=2.9 Score=46.69 Aligned_cols=54 Identities=22% Similarity=0.288 Sum_probs=41.4
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCCeEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALV 250 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg~l~ 250 (758)
+..+.++.+-|||..|....+ ..++|+|+..|..++ ++.+ ....++||.||+.|
T Consensus 12 ~hci~d~afkPDGsqL~lAAg------~rlliyD~ndG~llq-tLKgHKDtVycVAys~dGkrF 68 (1081)
T KOG1538|consen 12 EHCINDIAFKPDGTQLILAAG------SRLLVYDTSDGTLLQ-PLKGHKDTVYCVAYAKDGKRF 68 (1081)
T ss_pred ccchheeEECCCCceEEEecC------CEEEEEeCCCccccc-ccccccceEEEEEEccCCcee
Confidence 346888999999999987663 479999999988776 4433 35668999999443
No 374
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=92.52 E-value=11 Score=36.57 Aligned_cols=208 Identities=14% Similarity=0.116 Sum_probs=100.4
Q ss_pred CceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCC--Cce----eecc-ccCcceeEEEecC
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIET--GTP----VGKP-LVGVTASVEWAGN 246 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~--g~~----~~~~-~~~~~~~~~wspD 246 (758)
+..|+.--|+--. -++.-..|||+|.+||-. +..-.|.++.... ... +... -++.+..++|..|
T Consensus 77 pp~v~~kr~khhk----gsiyc~~ws~~geliatg-----sndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~ 147 (350)
T KOG0641|consen 77 PPSVLCKRNKHHK----GSIYCTAWSPCGELIATG-----SNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDD 147 (350)
T ss_pred CCeEEeeeccccC----ccEEEEEecCccCeEEec-----CCCceEEEEecccccccccCcceeeeecCCceeeeEEecC
Confidence 4467776665433 356677999999999944 3345677765532 221 1211 1233455666554
Q ss_pred C----eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCce
Q 004368 247 E----ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEEL 322 (758)
Q Consensus 247 g----~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~ 322 (758)
. .|+... +....++|..+-+.++. ..-+......+..-.+| .|-+ + .+.+.+ ..|..+|+.-....
T Consensus 148 ~~s~~~il~s~---gagdc~iy~tdc~~g~~--~~a~sghtghilalysw--n~~m-~-~sgsqd-ktirfwdlrv~~~v 217 (350)
T KOG0641|consen 148 PESGGAILASA---GAGDCKIYITDCGRGQG--FHALSGHTGHILALYSW--NGAM-F-ASGSQD-KTIRFWDLRVNSCV 217 (350)
T ss_pred CCcCceEEEec---CCCcceEEEeecCCCCc--ceeecCCcccEEEEEEe--cCcE-E-EccCCC-ceEEEEeeecccee
Confidence 3 343332 23356789888888743 22333322222211234 4433 2 233322 22334444322212
Q ss_pred EEeec-c-ccce-----e-eEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEE
Q 004368 323 RVLTP-R-VVGV-----D-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYE 394 (758)
Q Consensus 323 ~~l~~-~-~~~~-----~-~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~ 394 (758)
..+-. . ..+. . ..++|.|+.|+ .... ...-+.+|+.+.-..+...|+..++.-..|++...++ ++.
T Consensus 218 ~~l~~~~~~~glessavaav~vdpsgrll~-sg~~----dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yl-lt~ 291 (350)
T KOG0641|consen 218 NTLDNDFHDGGLESSAVAAVAVDPSGRLLA-SGHA----DSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYL-LTC 291 (350)
T ss_pred eeccCcccCCCcccceeEEEEECCCcceee-eccC----CCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEE-EEe
Confidence 22211 1 1111 1 12778777433 2222 2456667776633344477777665544455444444 344
Q ss_pred EeCCeeEEEEEEcC
Q 004368 395 REGGLQKITTYRLP 408 (758)
Q Consensus 395 ~~~g~~~l~v~~l~ 408 (758)
+.+- .+.+-++.
T Consensus 292 syd~--~ikltdlq 303 (350)
T KOG0641|consen 292 SYDM--KIKLTDLQ 303 (350)
T ss_pred cccc--eEEEeecc
Confidence 4443 35566665
No 375
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=92.47 E-value=6 Score=48.26 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=62.8
Q ss_pred eEEECCCCCEEEEEEeCCCC-eEEEEEEEECCCCceee--ccccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGD-EIYTVYVIDIETGTPVG--KPLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~-e~~~l~v~dl~~g~~~~--~~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
.++|-.||+++|.+.-.... ....|+|++-+ |+... ....+....++|.|.| -|+-+.. ..++..-++.-+-|-
T Consensus 214 ~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~-~~~~~~VvFfErNGL 291 (928)
T PF04762_consen 214 RISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQR-LPDRHDVVFFERNGL 291 (928)
T ss_pred EEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEE-cCCCcEEEEEecCCc
Confidence 45899999999988652222 36789999976 55443 2445556779999999 5554443 333322223222222
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEec
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASE 304 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~ 304 (758)
...+-.+.+ .....-...+.|++|+..|++...
T Consensus 292 rhgeF~l~~-~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 292 RHGEFTLRF-DPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred EeeeEecCC-CCCCceeeEEEECCCCCEEEEEec
Confidence 211111112 112222356889999999988664
No 376
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=92.42 E-value=0.15 Score=50.89 Aligned_cols=22 Identities=32% Similarity=0.519 Sum_probs=18.2
Q ss_pred CCcEEEEEeChhHHHHHHHHhh
Q 004368 594 KEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 594 ~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
..+|.++|||+||.++-.++..
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccceEEEecccHHHHHHHHHH
Confidence 3689999999999988766663
No 377
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=92.29 E-value=2 Score=46.39 Aligned_cols=93 Identities=17% Similarity=0.153 Sum_probs=57.5
Q ss_pred EECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc-ceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCC
Q 004368 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSN 274 (758)
Q Consensus 197 ~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~-~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~ 274 (758)
.+.|-| .||.... ...+.|+|.++...+.+...+. .+-+.+|||| .|+.-+.|. .+|++++..+..
T Consensus 414 ~fhpsg-~va~Gt~-----~G~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~-----~iyiy~Vs~~g~- 481 (626)
T KOG2106|consen 414 DFHPSG-VVAVGTA-----TGRWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHDN-----HIYIYRVSANGR- 481 (626)
T ss_pred eccCcc-eEEEeec-----cceEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCCC-----eEEEEEECCCCc-
Confidence 455555 4443332 3467889998866655533333 5668999999 666554433 488888866532
Q ss_pred cEEEeeecCCceeeEEEEcCCCcEEEE
Q 004368 275 DICLYHEKDDIYSLGLQASESKKFLFI 301 (758)
Q Consensus 275 ~~~v~~~~~~~~~~~~~~S~Dg~~l~~ 301 (758)
.......-...+...+.||+|+++|.-
T Consensus 482 ~y~r~~k~~gs~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 482 KYSRVGKCSGSPITHLDWSSDSQFLVS 508 (626)
T ss_pred EEEEeeeecCceeEEeeecCCCceEEe
Confidence 233333333355667889999998764
No 378
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=92.25 E-value=12 Score=39.34 Aligned_cols=152 Identities=8% Similarity=0.091 Sum_probs=81.3
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc--ccC---cceeEEEecCC-eEEEEEeCCCCCCceEEEEEc
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVG---VTASVEWAGNE-ALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~---~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l 268 (758)
++.||| +.+..-..|+=...|+++...+|....+. +.+ .+..+.|||.- .+|++..-+. .+.++++
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDi 287 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDG----SIRIWDI 287 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCc----eEEEEEe
Confidence 568998 23332334666678999999998876542 222 24568999987 6766654221 2555666
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC---ceEEeeccccceee-EEeecCCEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE---ELRVLTPRVVGVDT-AASHRGNHFF 344 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~---~~~~l~~~~~~~~~-~~s~dg~~l~ 344 (758)
..++.+.- ++......-.--++|+.+-.. +.+..+.++-. ++|+..-+ +...+.-...-+.. .|.|....++
T Consensus 288 Rs~~~~~~-~~~kAh~sDVNVISWnr~~~l-LasG~DdGt~~--iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~i 363 (440)
T KOG0302|consen 288 RSGPKKAA-VSTKAHNSDVNVISWNRREPL-LASGGDDGTLS--IWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVI 363 (440)
T ss_pred cCCCccce-eEeeccCCceeeEEccCCcce-eeecCCCceEE--EEEhhhccCCCcceeEEeccCCeeEEEeccccCceE
Confidence 66644333 333322221213568776653 33333344444 44554322 22222222222332 3888877777
Q ss_pred EEEcCCCCCCcEEEEEeC
Q 004368 345 ITRRSDELFNSELLACPV 362 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~ 362 (758)
.++..+ .+|...|+
T Consensus 364 aasg~D----~QitiWDl 377 (440)
T KOG0302|consen 364 AASGED----NQITIWDL 377 (440)
T ss_pred EeccCC----CcEEEEEe
Confidence 666654 34555555
No 379
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=92.24 E-value=4.7 Score=42.14 Aligned_cols=114 Identities=14% Similarity=0.076 Sum_probs=70.9
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc-cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcC
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~-~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
-.+.++.|++ .-.+|+..- .-+|.+|||.+|....... ......+..+|...++..... .+ .+.+|+-.
T Consensus 261 ~~Vs~V~w~d--~~v~yS~Sw----DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gss--dr--~irl~DPR 330 (423)
T KOG0313|consen 261 EPVSSVVWSD--ATVIYSVSW----DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSS--DR--HIRLWDPR 330 (423)
T ss_pred cceeeEEEcC--CCceEeecc----cceEEEEEeecccceeeeecCcceeEeecccccceeeecCC--CC--ceeecCCC
Confidence 3578889998 556776643 4689999999998765322 223556788888755444332 22 25555555
Q ss_pred CCCCCcEE-EeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEe
Q 004368 270 ADQSNDIC-LYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLD 315 (758)
Q Consensus 270 ~~~~~~~~-v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d 315 (758)
++...-+. .|.. ...+..++.|+|-..+++++....++..+|-+.
T Consensus 331 ~~~gs~v~~s~~g-H~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR 376 (423)
T KOG0313|consen 331 TGDGSVVSQSLIG-HKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR 376 (423)
T ss_pred CCCCceeEEeeec-chhhhhheecCCCCceEEEEEecCCeEEEEEec
Confidence 54332211 1222 233556788999999999887777766666443
No 380
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=92.18 E-value=2 Score=42.99 Aligned_cols=91 Identities=16% Similarity=0.176 Sum_probs=54.8
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHc-CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (758)
.|+|| .||-...+....+....+.+-+. |..|.+.+.--+ -...|. .+..+.+.-+.+.+... ---+
T Consensus 24 ~P~ii-~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g--~~~s~l--------~pl~~Qv~~~ce~v~~m-~~ls 91 (296)
T KOG2541|consen 24 VPVIV-WHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDG--IKDSSL--------MPLWEQVDVACEKVKQM-PELS 91 (296)
T ss_pred CCEEE-EeccCcccccchHHHHHHHHHhCCCCeeEEEEecCC--cchhhh--------ccHHHHHHHHHHHHhcc-hhcc
Confidence 56555 59865555544444444555554 888888886322 112222 12234444455555533 3346
Q ss_pred CcEEEEEeChhHHHHHHHHhhCCC
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRPD 618 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p~ 618 (758)
+-.-++|.|.||+++=+++...++
T Consensus 92 qGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCCC
Confidence 789999999999998888877654
No 381
>PF03283 PAE: Pectinacetylesterase
Probab=91.94 E-value=0.097 Score=56.13 Aligned_cols=37 Identities=24% Similarity=0.184 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHH
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVL 613 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~ 613 (758)
.-+.+++++|..+|+-++++|.+.|.|+||+-+..-+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 4578899999999999999999999999999765443
No 382
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.82 E-value=0.49 Score=48.02 Aligned_cols=85 Identities=18% Similarity=0.056 Sum_probs=51.9
Q ss_pred CEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCc
Q 004368 517 PLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEK 596 (758)
Q Consensus 517 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~ 596 (758)
|.|+++|++.|.. +.|.+....|... ..|+....+|-+... ....+++|..+..-..+.+.. -...
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~----------~~~~~l~~~a~~yv~~Ir~~Q-P~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGE----------QPFASLDDMAAAYVAAIRRVQ-PEGP 66 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCcccccc----------cccCCHHHHHHHHHHHHHHhC-CCCC
Confidence 5678889865532 2344444455444 778888888765322 223445665554322222211 2358
Q ss_pred EEEEEeChhHHHHHHHHhh
Q 004368 597 LCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 597 i~i~G~S~GG~l~~~~~~~ 615 (758)
..+.|+|+||.++..++.+
T Consensus 67 y~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred EEEEeeccccHHHHHHHHH
Confidence 9999999999999887775
No 383
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=91.79 E-value=3.4 Score=43.50 Aligned_cols=104 Identities=22% Similarity=0.282 Sum_probs=62.0
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECC--------C-----Cc-eee-ccccC---cceeEEEecCC-eEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIE--------T-----GT-PVG-KPLVG---VTASVEWAGNE-ALV 250 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~--------~-----g~-~~~-~~~~~---~~~~~~wspDg-~l~ 250 (758)
..++..+.|||+|..||=..| ..++.+|-.. + .+ .+. ..+.+ -....+|+||+ .+.
T Consensus 65 ~~aVN~vRf~p~gelLASg~D-----~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~ 139 (434)
T KOG1009|consen 65 TRAVNVVRFSPDGELLASGGD-----GGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLV 139 (434)
T ss_pred cceeEEEEEcCCcCeeeecCC-----CceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceee
Confidence 467889999999999984333 3445555443 3 11 011 11111 13347999999 565
Q ss_pred EEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCC
Q 004368 251 YITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESK 306 (758)
Q Consensus 251 y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~ 306 (758)
..+.+. .++.+++..++ -..++.+ +..+..+++|.|-++|+...+.++
T Consensus 140 s~s~dn-----s~~l~Dv~~G~--l~~~~~d-h~~yvqgvawDpl~qyv~s~s~dr 187 (434)
T KOG1009|consen 140 SGSVDN-----SVRLWDVHAGQ--LLAILDD-HEHYVQGVAWDPLNQYVASKSSDR 187 (434)
T ss_pred eeeccc-----eEEEEEeccce--eEeeccc-cccccceeecchhhhhhhhhccCc
Confidence 555543 37777888773 2233332 344555788999999887655443
No 384
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=91.74 E-value=9.4 Score=43.27 Aligned_cols=107 Identities=13% Similarity=0.216 Sum_probs=56.3
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-----eeEEeecCCEEEEEEcCCCCCCcEEEEEeCC
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-----DTAASHRGNHFFITRRSDELFNSELLACPVD 363 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-----~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~ 363 (758)
+....|..++++....+ ..|.+++.+.++ .+...+...+. ....+|.| +|+.+.-. +-.|..+|.-
T Consensus 601 Dm~Vdp~~k~v~t~cQD---rnirif~i~sgK-q~k~FKgs~~~eG~lIKv~lDPSg--iY~atScs---dktl~~~Df~ 671 (1080)
T KOG1408|consen 601 DMAVDPTSKLVVTVCQD---RNIRIFDIESGK-QVKSFKGSRDHEGDLIKVILDPSG--IYLATSCS---DKTLCFVDFV 671 (1080)
T ss_pred EeeeCCCcceEEEEecc---cceEEEeccccc-eeeeecccccCCCceEEEEECCCc--cEEEEeec---CCceEEEEec
Confidence 45566777776654433 346777888776 55555433222 12355655 45555433 2347777765
Q ss_pred CCCcceeeecCCCCceeeeEEEeCC--EEEEEEEeCCeeEEEEEEcCC
Q 004368 364 NTSETTVLIPHRESVKLQDIQLFID--HLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 364 ~~~~~~~l~~~~~~~~~~~~~~~~~--~l~~~~~~~g~~~l~v~~l~~ 409 (758)
..+-....+.+.+- +.++-+.+| +|+ ....+|. |.||.++.
T Consensus 672 sgEcvA~m~GHsE~--VTG~kF~nDCkHlI-SvsgDgC--IFvW~lp~ 714 (1080)
T KOG1408|consen 672 SGECVAQMTGHSEA--VTGVKFLNDCKHLI-SVSGDGC--IFVWKLPL 714 (1080)
T ss_pred cchhhhhhcCcchh--eeeeeecccchhhe-eecCCce--EEEEECch
Confidence 43222234445443 445555554 443 4445555 66777663
No 385
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=91.71 E-value=3 Score=43.96 Aligned_cols=124 Identities=14% Similarity=0.112 Sum_probs=73.3
Q ss_pred CCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecC---Ccee
Q 004368 213 GDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKD---DIYS 287 (758)
Q Consensus 213 G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~---~~~~ 287 (758)
|.-.-.|+.||..++..+.. +..+...++.-++|| .+.-.+.++ .+-.+++.+. +-..+|.... ..-+
T Consensus 318 gH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd-----tl~viDlRt~--eI~~~~sA~g~k~asDw 390 (459)
T KOG0288|consen 318 GHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD-----TLKVIDLRTK--EIRQTFSAEGFKCASDW 390 (459)
T ss_pred cccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCC-----ceeeeecccc--cEEEEeecccccccccc
Confidence 43345699999887776653 455567779999999 665444433 2566676655 2333443211 1112
Q ss_pred eEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEee--cccc-cee-eEEeecCCEEEEEE
Q 004368 288 LGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT--PRVV-GVD-TAASHRGNHFFITR 347 (758)
Q Consensus 288 ~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~--~~~~-~~~-~~~s~dg~~l~~~s 347 (758)
..+.+||||+|++..+.+ ..||++++.+++ ...+. .... ++. ..|++.|..++-..
T Consensus 391 trvvfSpd~~YvaAGS~d---gsv~iW~v~tgK-lE~~l~~s~s~~aI~s~~W~~sG~~Llsad 450 (459)
T KOG0288|consen 391 TRVVFSPDGSYVAAGSAD---GSVYIWSVFTGK-LEKVLSLSTSNAAITSLSWNPSGSGLLSAD 450 (459)
T ss_pred ceeEECCCCceeeeccCC---CcEEEEEccCce-EEEEeccCCCCcceEEEEEcCCCchhhccc
Confidence 246699999998765433 358888988887 33222 2222 232 34888887665443
No 386
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=91.68 E-value=7.4 Score=39.35 Aligned_cols=157 Identities=14% Similarity=0.143 Sum_probs=88.4
Q ss_pred EEeeEEECC-CCCEEEEEEeCCCCeEEEEEEEECCCCce---e-ec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEE
Q 004368 192 SVGCFQVSP-DNKLVAYAEDTKGDEIYTVYVIDIETGTP---V-GK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAW 264 (758)
Q Consensus 192 ~i~~~~~SP-DG~~lAy~~~~~G~e~~~l~v~dl~~g~~---~-~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~ 264 (758)
.+.++.|.- |-++|.-+ +- ..+.-|||+++|.. . ++ .-+.-+..++|+.+| .+|.+...++ .|.
T Consensus 152 PlTSFDWne~dp~~igtS-Si----DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDG----SvR 222 (364)
T KOG0290|consen 152 PLTSFDWNEVDPNLIGTS-SI----DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADG----SVR 222 (364)
T ss_pred cccccccccCCcceeEee-cc----cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCC----cEE
Confidence 455666654 44444332 22 25677889988733 1 22 112224559999988 5544433221 366
Q ss_pred EEEcCCCCCCcEEEeeecC-CceeeEEEEcCC-CcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccceee-EEeecC
Q 004368 265 LHKLEADQSNDICLYHEKD-DIYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVDT-AASHRG 340 (758)
Q Consensus 265 ~~~l~~~~~~~~~v~~~~~-~~~~~~~~~S~D-g~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~-~~s~dg 340 (758)
+.+|..-+ -..++|+.+. ..-.+.++|.+. -++++- -..+.++|.++|+.-+. +...|..+...+.. .|.|..
T Consensus 223 mFDLR~le-HSTIIYE~p~~~~pLlRLswnkqDpnymAT--f~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS 299 (364)
T KOG0290|consen 223 MFDLRSLE-HSTIIYEDPSPSTPLLRLSWNKQDPNYMAT--FAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHS 299 (364)
T ss_pred EEEecccc-cceEEecCCCCCCcceeeccCcCCchHHhh--hhcCCceEEEEEecCCCcceehhhcCcccccceEecCCC
Confidence 66776553 3567887765 233456778774 444432 22355789999988765 44455544443332 388876
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 341 NHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 341 ~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
...+....+ ..+....|+..
T Consensus 300 ~~hictaGD----D~qaliWDl~q 319 (364)
T KOG0290|consen 300 SSHICTAGD----DCQALIWDLQQ 319 (364)
T ss_pred CceeeecCC----cceEEEEeccc
Confidence 655444333 35677788765
No 387
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=91.68 E-value=0.83 Score=49.51 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=55.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecccc-CcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLV-GVTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~-~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
+-...|||....|+ .|+|.+...|||--+.....-... -...+++|.|| ++|.+..-.. .+
T Consensus 189 iL~~~W~~~s~lI~-----sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~nt------~R------ 250 (737)
T KOG1524|consen 189 VLSLSWSTQSNIIA-----SGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLLWSYNT------AR------ 250 (737)
T ss_pred EEEeecCcccccee-----ecCCceeEEeecccCcccccCChhccceeeeeeccc-cceeeeeeee------ee------
Confidence 34568888888887 578889999999765443332222 23677999999 5544432111 11
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEec
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASE 304 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~ 304 (758)
++.++....+.++||+||..++....
T Consensus 251 -------~~~p~~GSifnlsWS~DGTQ~a~gt~ 276 (737)
T KOG1524|consen 251 -------FSSPRVGSIFNLSWSADGTQATCGTS 276 (737)
T ss_pred -------ecCCCccceEEEEEcCCCceeecccc
Confidence 33333344457899999999876543
No 388
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=91.66 E-value=2.8 Score=44.12 Aligned_cols=193 Identities=14% Similarity=0.126 Sum_probs=105.8
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceee-ccccCc-ceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG-KPLVGV-TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~-~~~~~~-~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
-+|..+++||.....+=.++ ..+|.|||..-.+... +.-.+- ..++.|.|.-.++++..++. -|.+++-
T Consensus 181 eaIRdlafSpnDskF~t~Sd-----Dg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDn----lVKlWDp 251 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSD-----DGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDN----LVKLWDP 251 (464)
T ss_pred hhhheeccCCCCceeEEecC-----CCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCc----eeEeecC
Confidence 46888999995555442232 3479999976554432 222232 55689999876766665443 3666666
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee-eEEeecCCEEEEEE
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD-TAASHRGNHFFITR 347 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s 347 (758)
.++.. +..+. ......+.+.|+++|.||+-.+.+. .+-++|+.+-+.+.........+. ..|.|-...|+...
T Consensus 252 rSg~c--l~tlh-~HKntVl~~~f~~n~N~Llt~skD~---~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 252 RSGSC--LATLH-GHKNTVLAVKFNPNGNWLLTGSKDQ---SCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSG 325 (464)
T ss_pred CCcch--hhhhh-hccceEEEEEEcCCCCeeEEccCCc---eEEEEehhHhHHHHHhhcchhhheeeccccccccceeec
Confidence 66522 21111 2233456788999999987544332 456667764333444443333333 23777766666554
Q ss_pred cCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeC-CEEEEEEEeCCeeEEE
Q 004368 348 RSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKIT 403 (758)
Q Consensus 348 ~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~l~~~~~~~g~~~l~ 403 (758)
..+ +.|+...+.. ......++...+..+-++++.. ++|+.....+...+.+
T Consensus 326 g~D----gsvvh~~v~~-~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw 377 (464)
T KOG0284|consen 326 GSD----GSVVHWVVGL-EEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFW 377 (464)
T ss_pred cCC----CceEEEeccc-cccccCCCcccccceeeeeccccceeEeecCCCcceeee
Confidence 443 3344444321 1122245555555566666655 4665555555444433
No 389
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=91.62 E-value=7.1 Score=41.09 Aligned_cols=142 Identities=17% Similarity=0.127 Sum_probs=74.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
.++-+.|.|--.-+..+. |. .++|.+||+.||+.+-. .-++...++.|+-||.++.++..+ .+|.+++..+
T Consensus 133 rVg~V~wHPtA~NVLlsa---g~-Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckD----KkvRv~dpr~ 204 (472)
T KOG0303|consen 133 RVGLVQWHPTAPNVLLSA---GS-DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKD----KKVRVIDPRR 204 (472)
T ss_pred eEEEEeecccchhhHhhc---cC-CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeeccc----ceeEEEcCCC
Confidence 455666666554443332 22 47899999999997642 334556679999999554554432 2466666554
Q ss_pred CCCCcEEEeeec-C-CceeeEEEEcCCCcEEEEEec-CCcceEEEEEeCCCCCce---EEeecccccee-eEEeecCCEE
Q 004368 271 DQSNDICLYHEK-D-DIYSLGLQASESKKFLFIASE-SKITRFVFYLDVSKPEEL---RVLTPRVVGVD-TAASHRGNHF 343 (758)
Q Consensus 271 ~~~~~~~v~~~~-~-~~~~~~~~~S~Dg~~l~~~s~-~~~~~~l~~~d~~~~~~~---~~l~~~~~~~~-~~~s~dg~~l 343 (758)
+ .++.+.. . ..--..+-|-.+|+ |+-+.- .....++-++|.+.-+.+ ..| ....|+. .++++|.+.+
T Consensus 205 ~----~~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~el-DtSnGvl~PFyD~dt~iv 278 (472)
T KOG0303|consen 205 G----TVVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQEL-DTSNGVLLPFYDPDTSIV 278 (472)
T ss_pred C----cEeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcceeEEe-ccCCceEEeeecCCCCEE
Confidence 4 2333321 1 00111234667887 333322 223355566665543311 222 1223333 3477776655
Q ss_pred EEEE
Q 004368 344 FITR 347 (758)
Q Consensus 344 ~~~s 347 (758)
|+..
T Consensus 279 Yl~G 282 (472)
T KOG0303|consen 279 YLCG 282 (472)
T ss_pred EEEe
Confidence 5553
No 390
>PRK13613 lipoprotein LpqB; Provisional
Probab=91.47 E-value=16 Score=42.18 Aligned_cols=165 Identities=17% Similarity=0.145 Sum_probs=87.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce----eeccccC-cceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP----VGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~----~~~~~~~-~~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
.+.++.+|+||+.+|+... .+ ..+++-.+..+.. ....+.+ ....+.|.++|.++-+ +......++.+.
T Consensus 364 ~~~s~avS~~g~~~A~v~~-~~---~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g~vWtv--d~~~~~~~vl~v 437 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISA-DG---DSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRGDLWVV--DRDPADPRLLWL 437 (599)
T ss_pred CccceEEcCCCceEEEEcC-CC---cEEEEeccCCCCccccccceeeccCcccCCcCcCCCCEEEe--cCCCCCceEEEE
Confidence 4668899999999999843 22 5788877655443 1111222 2566889888854433 221112233322
Q ss_pred EcCCCCCCcEEEee-ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCC---CCC----ceEEeeccccce-eeEEe
Q 004368 267 KLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS---KPE----ELRVLTPRVVGV-DTAAS 337 (758)
Q Consensus 267 ~l~~~~~~~~~v~~-~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~---~~~----~~~~l~~~~~~~-~~~~s 337 (758)
.-+++. ...+-. .-...-...+..|+||-.+++.....+..+|++--+. ++. .++.+....... ...|.
T Consensus 438 ~~~~G~--~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~ 515 (599)
T PRK13613 438 LQGDGE--PVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWA 515 (599)
T ss_pred EcCCCc--EEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEc
Confidence 212331 211111 1112234468899999999887766555566653322 221 122333322222 23476
Q ss_pred ecCCEEEEEEcCCCCCCcEEEEEeCCCCC
Q 004368 338 HRGNHFFITRRSDELFNSELLACPVDNTS 366 (758)
Q Consensus 338 ~dg~~l~~~s~~~~~~~~~L~~~~~~~~~ 366 (758)
.++. |+++.... ..+..++++.+++..
T Consensus 516 ~~~s-L~Vlg~~~-~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 516 GDSQ-LVVLGREE-GGVQQARYVQVDGST 542 (599)
T ss_pred CCCE-EEEEeccC-CCCcceEEEecCCcC
Confidence 6554 66654333 235678888888643
No 391
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=91.35 E-value=1.3 Score=49.65 Aligned_cols=113 Identities=13% Similarity=0.126 Sum_probs=62.9
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC--cceeEEEecCC-eEEEEEeCCCCCCceEE--EE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAW--LH 266 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~wspDg-~l~y~~~~~~~~~~~v~--~~ 266 (758)
.+..++|||||+|+|-... | ....+.||+|+....+..-.+. ....++|||.+ .+.-+...... --.|| +.
T Consensus 80 ~~t~vAfS~~GryvatGEc--G-~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDM-IVnv~dWr~ 155 (1080)
T KOG1408|consen 80 PLTCVAFSQNGRYVATGEC--G-RTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDM-IVNVNDWRV 155 (1080)
T ss_pred ceeEEEEcCCCcEEEeccc--C-CCccceeeeeccccchhhhhhccccceeeeecCCCcEEEeeccccce-EEEhhhhhh
Confidence 5778899999999985543 2 2467999999987655432222 25668999999 45433322111 00122 22
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCC
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~ 318 (758)
++... .+.-......+++|.||.|.+-..+. .-.+|.++...
T Consensus 156 N~~~a--------snkiss~Vsav~fsEdgSYfvT~gnr--Hvk~wyl~~~~ 197 (1080)
T KOG1408|consen 156 NSSGA--------SNKISSVVSAVAFSEDGSYFVTSGNR--HVKLWYLQIQS 197 (1080)
T ss_pred ccccc--------ccccceeEEEEEEccCCceeeeeeee--eEEEEEeeccc
Confidence 22111 11111122346799999986544332 23456666543
No 392
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=91.27 E-value=5.8 Score=40.64 Aligned_cols=158 Identities=12% Similarity=0.109 Sum_probs=83.3
Q ss_pred CeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEEC-CCCceeec--c-------ccCcceeEEEecCC-e-EEEEEeCC
Q 004368 189 GFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDI-ETGTPVGK--P-------LVGVTASVEWAGNE-A-LVYITMDE 256 (758)
Q Consensus 189 ~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl-~~g~~~~~--~-------~~~~~~~~~wspDg-~-l~y~~~~~ 256 (758)
++...-+..|||||.+|.-.. ...|+|+|+ ..|..-+. + ..++.+.++++|-. + ++.-+...
T Consensus 157 e~taAhsL~Fs~DGeqlfaGy------krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q 230 (406)
T KOG2919|consen 157 EYTAAHSLQFSPDGEQLFAGY------KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ 230 (406)
T ss_pred hhhhheeEEecCCCCeEeecc------cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccc
Confidence 344556789999999986322 467999998 45543221 1 13456778999866 3 44333321
Q ss_pred CCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeecccc----c
Q 004368 257 ILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVV----G 331 (758)
Q Consensus 257 ~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~----~ 331 (758)
...+|..+ .. +...++.+.... ...+.|-+||..|+..+ +...+|-.+|+.... .+..|..... -
T Consensus 231 ---~~giy~~~--~~--~pl~llggh~gG-vThL~~~edGn~lfsGa--Rk~dkIl~WDiR~~~~pv~~L~rhv~~TNQR 300 (406)
T KOG2919|consen 231 ---RVGIYNDD--GR--RPLQLLGGHGGG-VTHLQWCEDGNKLFSGA--RKDDKILCWDIRYSRDPVYALERHVGDTNQR 300 (406)
T ss_pred ---eeeeEecC--CC--CceeeecccCCC-eeeEEeccCcCeecccc--cCCCeEEEEeehhccchhhhhhhhccCccce
Confidence 12244322 11 222233222222 33578999999876433 223455666765432 2222221111 1
Q ss_pred eeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004368 332 VDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (758)
Q Consensus 332 ~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~ 367 (758)
+.+..+|+|++|+-- ...+-|-++|+++.+.
T Consensus 301 I~FDld~~~~~LasG-----~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 301 ILFDLDPKGEILASG-----DTDGSVRVWDLKDLGN 331 (406)
T ss_pred EEEecCCCCceeecc-----CCCccEEEEecCCCCC
Confidence 233467777765421 2345677778776443
No 393
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=91.11 E-value=2.4 Score=46.15 Aligned_cols=58 Identities=16% Similarity=0.169 Sum_probs=37.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCC-eEEEEEeC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMD 255 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg-~l~y~~~~ 255 (758)
.+..-+|||||.-|. ++ +|...|.+|.- +|-.+.. ........++|.|++ .++|...+
T Consensus 106 A~~~gRW~~dGtgLl-t~----GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~ 166 (737)
T KOG1524|consen 106 AISSGRWSPDGAGLL-TA----GEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQGG 166 (737)
T ss_pred hhhhcccCCCCceee-ee----cCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecCC
Confidence 344568999999775 22 23457888875 4544432 222235668999999 89998653
No 394
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=90.55 E-value=0.7 Score=49.34 Aligned_cols=97 Identities=15% Similarity=0.101 Sum_probs=57.7
Q ss_pred EEEEecCCCccCCCCCCChHHHHHHHcCcE---EEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCC
Q 004368 518 LLLYGYGSYEICNDPAFNSSRLSLLDRGFI---FAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTK 594 (758)
Q Consensus 518 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 594 (758)
.++++||. +. ....|......+...|+. +..+.+.+....+.. ....+-+.+-++....... .
T Consensus 61 pivlVhG~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~ql~~~V~~~l~~~g--a 126 (336)
T COG1075 61 PIVLVHGL-GG-GYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSL----------AVRGEQLFAYVDEVLAKTG--A 126 (336)
T ss_pred eEEEEccC-cC-CcchhhhhhhhhcchHHHhcccccccccccCCCccc----------cccHHHHHHHHHHHHhhcC--C
Confidence 57778996 22 222344444455556777 666776654211111 1111233333333333322 3
Q ss_pred CcEEEEEeChhHHHHHHHHhhCC--CceeEEEEcCC
Q 004368 595 EKLCIEGRSAGGLLIGAVLNMRP--DLFKAAVAAVP 628 (758)
Q Consensus 595 ~~i~i~G~S~GG~l~~~~~~~~p--~~f~a~v~~~~ 628 (758)
.++.++|||+||.++-.++...+ .+++.++...+
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~t 162 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGT 162 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEecc
Confidence 89999999999999998888887 67888776654
No 395
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=90.54 E-value=24 Score=36.79 Aligned_cols=57 Identities=23% Similarity=0.274 Sum_probs=39.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC---cceeEEEecCCeEEEEEe
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG---VTASVEWAGNEALVYITM 254 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~---~~~~~~wspDg~l~y~~~ 254 (758)
.+..+.+-|-..++| .|+...+|.|||+++|+... ++.+ ...+++.|+---.+|...
T Consensus 153 WVr~vavdP~n~wf~-----tgs~DrtikIwDlatg~Lkl-tltGhi~~vr~vavS~rHpYlFs~g 212 (460)
T KOG0285|consen 153 WVRSVAVDPGNEWFA-----TGSADRTIKIWDLATGQLKL-TLTGHIETVRGVAVSKRHPYLFSAG 212 (460)
T ss_pred eEEEEeeCCCceeEE-----ecCCCceeEEEEcccCeEEE-eecchhheeeeeeecccCceEEEec
Confidence 566778888888876 34446789999999998765 4443 245678887763334443
No 396
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=90.49 E-value=20 Score=35.69 Aligned_cols=185 Identities=14% Similarity=0.123 Sum_probs=90.1
Q ss_pred CCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEE
Q 004368 199 SPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC 277 (758)
Q Consensus 199 SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~ 277 (758)
.+++++|... +.. ..|+.+|.++|+.+-. .+++......-..++.+++...+ ..++..++.++.. .-
T Consensus 33 ~~~~~~v~~~-~~~----~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~v~v~~~~-----~~l~~~d~~tG~~--~W 100 (238)
T PF13360_consen 33 VPDGGRVYVA-SGD----GNLYALDAKTGKVLWRFDLPGPISGAPVVDGGRVYVGTSD-----GSLYALDAKTGKV--LW 100 (238)
T ss_dssp EEETTEEEEE-ETT----SEEEEEETTTSEEEEEEECSSCGGSGEEEETTEEEEEETT-----SEEEEEETTTSCE--EE
T ss_pred EEeCCEEEEE-cCC----CEEEEEECCCCCEEEEeeccccccceeeecccccccccce-----eeeEecccCCcce--ee
Confidence 4456665444 322 4799999999987632 33332221222334467655522 1688888777632 11
Q ss_pred E-eeec--CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeeccccc---------eeeEEeecCCEEE
Q 004368 278 L-YHEK--DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVG---------VDTAASHRGNHFF 344 (758)
Q Consensus 278 v-~~~~--~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~---------~~~~~s~dg~~l~ 344 (758)
. .... ............++..+++... ...|+.+|+++++ .+..-...... ......-.++.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (238)
T PF13360_consen 101 SIYLTSSPPAGVRSSSSPAVDGDRLYVGTS---SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVY 177 (238)
T ss_dssp EEEE-SSCTCSTB--SEEEEETTEEEEEET---CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEE
T ss_pred eeccccccccccccccCceEecCEEEEEec---cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEE
Confidence 1 1111 1111112223334666666543 4568888988876 22221111110 0112222234565
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
+.+... +++.+|+.+. ...|-.+. ......+...++.+++.. +++ .+..+++.+
T Consensus 178 ~~~~~g-----~~~~~d~~tg-~~~w~~~~--~~~~~~~~~~~~~l~~~~-~~~--~l~~~d~~t 231 (238)
T PF13360_consen 178 VSSGDG-----RVVAVDLATG-EKLWSKPI--SGIYSLPSVDGGTLYVTS-SDG--RLYALDLKT 231 (238)
T ss_dssp EECCTS-----SEEEEETTTT-EEEEEECS--S-ECECEECCCTEEEEEE-TTT--EEEEEETTT
T ss_pred EEcCCC-----eEEEEECCCC-CEEEEecC--CCccCCceeeCCEEEEEe-CCC--EEEEEECCC
Confidence 554432 3667788763 33463331 112222556677777666 454 477777763
No 397
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=90.19 E-value=24 Score=36.23 Aligned_cols=138 Identities=15% Similarity=0.163 Sum_probs=70.8
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc--cCcceeEEEecCC--eEEEEEeCCCCCCceEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL--VGVTASVEWAGNE--ALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~--~~~~~~~~wspDg--~l~y~~~~~~~~~~~v~~~~ 267 (758)
++..+++ +|.++| .|+..-+|+|+|+........-+ .+......|.++- .-+....+++ ++..++
T Consensus 45 sitavAV--s~~~~a-----SGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG----~i~iw~ 113 (362)
T KOG0294|consen 45 SITALAV--SGPYVA-----SGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDG----HIIIWR 113 (362)
T ss_pred ceeEEEe--cceeEe-----ccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCC----cEEEEE
Confidence 3444444 467766 35546789999998766554322 2335556777765 2222222222 355555
Q ss_pred cCCCCCCcEEEee-ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-c-eEEeeccccceeeEEeecCCEEE
Q 004368 268 LEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-E-LRVLTPRVVGVDTAASHRGNHFF 344 (758)
Q Consensus 268 l~~~~~~~~~v~~-~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~-~~~l~~~~~~~~~~~s~dg~~l~ 344 (758)
.+.= +++-. .....-..+++..|.||. +++...... +.++||-.+. . ...|. .......|+|.|++++
T Consensus 114 ~~~W----~~~~slK~H~~~Vt~lsiHPS~KL-ALsVg~D~~--lr~WNLV~Gr~a~v~~L~--~~at~v~w~~~Gd~F~ 184 (362)
T KOG0294|consen 114 VGSW----ELLKSLKAHKGQVTDLSIHPSGKL-ALSVGGDQV--LRTWNLVRGRVAFVLNLK--NKATLVSWSPQGDHFV 184 (362)
T ss_pred cCCe----EEeeeecccccccceeEecCCCce-EEEEcCCce--eeeehhhcCccceeeccC--CcceeeEEcCCCCEEE
Confidence 5431 22211 111122345778899874 555554433 4445665554 1 11221 1122344889999888
Q ss_pred EEEcC
Q 004368 345 ITRRS 349 (758)
Q Consensus 345 ~~s~~ 349 (758)
+....
T Consensus 185 v~~~~ 189 (362)
T KOG0294|consen 185 VSGRN 189 (362)
T ss_pred EEecc
Confidence 76543
No 398
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=90.16 E-value=1.1 Score=57.65 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=61.0
Q ss_pred CCEEEEecCCCccCCCCCCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCC
Q 004368 516 DPLLLYGYGSYEICNDPAFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKE 595 (758)
Q Consensus 516 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 595 (758)
.|.++++||+.+... .|...... +..++.|+.++.+|.+.. .....+++++.+.+...+..-. ...
T Consensus 1068 ~~~l~~lh~~~g~~~--~~~~l~~~-l~~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~-~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAW--QFSVLSRY-LDPQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQ-PHG 1133 (1296)
T ss_pred CCCeEEecCCCCchH--HHHHHHHh-cCCCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhC-CCC
Confidence 366888898665432 24333333 345799999999987632 1112345555554333332211 125
Q ss_pred cEEEEEeChhHHHHHHHHhh---CCCceeEEEEcCC
Q 004368 596 KLCIEGRSAGGLLIGAVLNM---RPDLFKAAVAAVP 628 (758)
Q Consensus 596 ~i~i~G~S~GG~l~~~~~~~---~p~~f~a~v~~~~ 628 (758)
+..++|+|+||.++..++.+ +++....+++..+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 79999999999999888775 5777777765544
No 399
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=90.02 E-value=3.9 Score=45.28 Aligned_cols=180 Identities=15% Similarity=0.205 Sum_probs=76.3
Q ss_pred CceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCCeEEEEE
Q 004368 174 PEHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYIT 253 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg~l~y~~ 253 (758)
++.+.+....+.... .....++.+|+|+.++. . |+..+.|+- ....+....+....++|++.++++...
T Consensus 18 g~~~~l~~k~lg~~~--~~p~~ls~npngr~v~V--~--g~geY~iyt-----~~~~r~k~~G~g~~~vw~~~n~yAv~~ 86 (443)
T PF04053_consen 18 GERLPLSVKELGSCE--IYPQSLSHNPNGRFVLV--C--GDGEYEIYT-----ALAWRNKAFGSGLSFVWSSRNRYAVLE 86 (443)
T ss_dssp TS-B----EEEEE-S--S--SEEEE-TTSSEEEE--E--ETTEEEEEE-----TTTTEEEEEEE-SEEEE-TSSEEEEE-
T ss_pred CceeeEEeccCCCCC--cCCeeEEECCCCCEEEE--E--cCCEEEEEE-----ccCCcccccCceeEEEEecCccEEEEE
Confidence 344444444443322 23567899999999988 2 222577775 111111122334458999977755443
Q ss_pred eCCCCCCceEEE-EEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce
Q 004368 254 MDEILRPDKAWL-HKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV 332 (758)
Q Consensus 254 ~~~~~~~~~v~~-~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 332 (758)
. ...+.+ .++..... ..+ ..+ +.+.--+. |..|.+.+++ .|.++|.++++..+.+. ...+
T Consensus 87 ~-----~~~I~I~kn~~~~~~--k~i-~~~---~~~~~If~--G~LL~~~~~~----~i~~yDw~~~~~i~~i~--v~~v 147 (443)
T PF04053_consen 87 S-----SSTIKIYKNFKNEVV--KSI-KLP---FSVEKIFG--GNLLGVKSSD----FICFYDWETGKLIRRID--VSAV 147 (443)
T ss_dssp T-----TS-EEEEETTEE-TT--------S---S-EEEEE---SSSEEEEETT----EEEEE-TTT--EEEEES--S-E-
T ss_pred C-----CCeEEEEEcCccccc--eEE-cCC---cccceEEc--CcEEEEECCC----CEEEEEhhHcceeeEEe--cCCC
Confidence 2 123444 33322210 011 111 11110022 7766665433 48889998876222221 1223
Q ss_pred ee-EEeecCCEEEEEEcCCCCCCcEEEEEeCC------CCCcc-ee-eecCCCCceeeeEEEeCC
Q 004368 333 DT-AASHRGNHFFITRRSDELFNSELLACPVD------NTSET-TV-LIPHRESVKLQDIQLFID 388 (758)
Q Consensus 333 ~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~------~~~~~-~~-l~~~~~~~~~~~~~~~~~ 388 (758)
.+ .|+++|+.+++++... .-|+..+.+ ..+.. .. ++.+ -...+.+..|.++
T Consensus 148 k~V~Ws~~g~~val~t~~~----i~il~~~~~~~~~~~~~g~e~~f~~~~E-~~~~IkSg~W~~d 207 (443)
T PF04053_consen 148 KYVIWSDDGELVALVTKDS----IYILKYNLEAVAAIPEEGVEDAFELIHE-ISERIKSGCWVED 207 (443)
T ss_dssp EEEEE-TTSSEEEEE-S-S----EEEEEE-HHHHHHBTTTB-GGGEEEEEE-E-S--SEEEEETT
T ss_pred cEEEEECCCCEEEEEeCCe----EEEEEecchhcccccccCchhceEEEEE-ecceeEEEEEEcC
Confidence 33 4999999999987653 556666554 10111 11 2222 1345778889999
No 400
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.98 E-value=4.4 Score=40.16 Aligned_cols=133 Identities=16% Similarity=0.107 Sum_probs=66.4
Q ss_pred CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHH-HHHHH-cC--cEEEEEecCCCCCCchhHHhccccc
Q 004368 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSR-LSLLD-RG--FIFAIAQIRGGGELGRQWYENGKFL 570 (758)
Q Consensus 495 dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~-~~l~~-~G--~~v~~~~~RG~g~~G~~~~~~~~~~ 570 (758)
.|..+....+.|--. +.+...|.|+++-|.||. .+|...+ ..|.. .+ .-+..+-.-|+-.....-.+.....
T Consensus 9 ~gl~~si~~~~~~v~-~~~~~~~li~~IpGNPG~---~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~ 84 (301)
T KOG3975|consen 9 SGLPTSILTLKPWVT-KSGEDKPLIVWIPGNPGL---LGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHT 84 (301)
T ss_pred cCCcccceeeeeeec-cCCCCceEEEEecCCCCc---hhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccc
Confidence 344444444444433 445678999999997764 3344333 23322 22 2233333334433332111111111
Q ss_pred -CCcChHhHHHH-HHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCc---eeEEEEcCCccch
Q 004368 571 -KKKNTFTDFIA-CAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDL---FKAAVAAVPFVDV 632 (758)
Q Consensus 571 -~~~~~~~D~~~-~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~---f~a~v~~~~~~d~ 632 (758)
...-+.+|.+. -+++ +++....-.||.++|||-|+|+++.++-..-+. -||+.+..-+.+|
T Consensus 85 ~~eifsL~~QV~HKlaF-ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM 150 (301)
T KOG3975|consen 85 NEEIFSLQDQVDHKLAF-IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERM 150 (301)
T ss_pred cccccchhhHHHHHHHH-HHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHH
Confidence 11223334333 2333 333444558999999999999999988743222 3444444434443
No 401
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=89.81 E-value=1.6 Score=50.02 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=55.0
Q ss_pred eEEEEEEEECCCCceeec--cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEE
Q 004368 215 EIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQ 291 (758)
Q Consensus 215 e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~ 291 (758)
+.+.|.++|+.|.+..+. .-.+....+.||||| +|+-.+.|. .+..+++.++.--|-+.++. + ..+++
T Consensus 554 ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~-----tIr~wDlpt~~lID~~~vd~--~--~~sls 624 (910)
T KOG1539|consen 554 DDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS-----TIRTWDLPTGTLIDGLLVDS--P--CTSLS 624 (910)
T ss_pred CceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC-----cEEEEeccCcceeeeEecCC--c--ceeeE
Confidence 457899999988777663 122346779999999 665555554 37788998885545444432 2 34678
Q ss_pred EcCCCcEEEEEe
Q 004368 292 ASESKKFLFIAS 303 (758)
Q Consensus 292 ~S~Dg~~l~~~s 303 (758)
+||.|.+|+...
T Consensus 625 ~SPngD~LAT~H 636 (910)
T KOG1539|consen 625 FSPNGDFLATVH 636 (910)
T ss_pred ECCCCCEEEEEE
Confidence 999999997643
No 402
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=89.81 E-value=1.3 Score=46.37 Aligned_cols=117 Identities=20% Similarity=0.233 Sum_probs=70.5
Q ss_pred CCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHHc---C------cEEEEEecCCCCCCchhHHh
Q 004368 495 DGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR---G------FIFAIAQIRGGGELGRQWYE 565 (758)
Q Consensus 495 dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~---G------~~v~~~~~RG~g~~G~~~~~ 565 (758)
.|.+|+-.-+.|+...+..+..| ||+.||-+|+-.. |...+..|.+- | |-|++|-++|-| |.+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~P-lLl~HGwPGsv~E--FykfIPlLT~p~~hg~~~d~~FEVI~PSlPGyg-----wSd 203 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKP-LLLLHGWPGSVRE--FYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYG-----WSD 203 (469)
T ss_pred cceeEEEEEecCCccccCCcccc-eEEecCCCchHHH--HHhhhhhhcCccccCCccceeEEEeccCCCCcc-----cCc
Confidence 68888877777765412233455 5557998876432 43333344332 2 568888888643 333
Q ss_pred cccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEE
Q 004368 566 NGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 623 (758)
Q Consensus 566 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~ 623 (758)
+. ...+-+.+.-..-..+.+...|+ ++..|.|+-+|..++..++..+|+.+.+.
T Consensus 204 ~~-sk~GFn~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~Gl 257 (469)
T KOG2565|consen 204 AP-SKTGFNAAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGL 257 (469)
T ss_pred CC-ccCCccHHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHh
Confidence 22 12222322221112233455565 89999999999999999999999976554
No 403
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=89.71 E-value=0.85 Score=49.83 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=54.4
Q ss_pred CCChHHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHH
Q 004368 533 AFNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 612 (758)
Q Consensus 533 ~~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 612 (758)
.|...+..|.+.||..- .+++| .+-+|+.... .....+..+...|+.+.+.. ..+|.|+||||||+++..+
T Consensus 66 ~~~~li~~L~~~GY~~~-~~l~~---~pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRG-KDLFA---APYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccC-CEEEE---Eeechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 46677788888887631 11111 1234443322 11233456666777665543 5899999999999999999
Q ss_pred HhhCCC------ceeEEEEcCC
Q 004368 613 LNMRPD------LFKAAVAAVP 628 (758)
Q Consensus 613 ~~~~p~------~f~a~v~~~~ 628 (758)
+...+. .+++.|..++
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~ 158 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGT 158 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCC
Confidence 888753 3566666554
No 404
>KOG4328 consensus WD40 protein [Function unknown]
Probab=89.42 E-value=10 Score=40.79 Aligned_cols=196 Identities=15% Similarity=0.164 Sum_probs=102.8
Q ss_pred EEEeeEEECCCCC-EEEEEEeCCCCeEEEEEEEECCCCceeecc-----cc-CcceeEEEecCC--eEEEEEeCCCCCCc
Q 004368 191 YSVGCFQVSPDNK-LVAYAEDTKGDEIYTVYVIDIETGTPVGKP-----LV-GVTASVEWAGNE--ALVYITMDEILRPD 261 (758)
Q Consensus 191 ~~i~~~~~SPDG~-~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~-----~~-~~~~~~~wspDg--~l~y~~~~~~~~~~ 261 (758)
-.+...+|.|-.. .|+-+-|..| +|-+||+.+.+...+. .. +-++++.|+|-+ +|+-++.|..
T Consensus 187 ~Rit~l~fHPt~~~~lva~GdK~G----~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGt---- 258 (498)
T KOG4328|consen 187 RRITSLAFHPTENRKLVAVGDKGG----QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGT---- 258 (498)
T ss_pred cceEEEEecccCcceEEEEccCCC----cEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCce----
Confidence 4677889999776 5544444444 7899999643332211 11 126778999988 6776777664
Q ss_pred eEEEEEcCCCCCCcEEEeee-cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ceEEeecccccee-eEEee
Q 004368 262 KAWLHKLEADQSNDICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-ELRVLTPRVVGVD-TAASH 338 (758)
Q Consensus 262 ~v~~~~l~~~~~~~~~v~~~-~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~-~~~s~ 338 (758)
+...++.....+ .++.- .+..++.+..++.+.+.+++..+-. .-.++.....+.+ ....+.+. .+. ..+.|
T Consensus 259 -iR~~D~~~~i~e--~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G-~f~~iD~R~~~s~~~~~~lh~k--KI~sv~~NP 332 (498)
T KOG4328|consen 259 -IRLQDFEGNISE--EVLSLDTDNIWFSSLDFSAESRSVLFGDNVG-NFNVIDLRTDGSEYENLRLHKK--KITSVALNP 332 (498)
T ss_pred -eeeeeecchhhH--HHhhcCccceeeeeccccCCCccEEEeeccc-ceEEEEeecCCccchhhhhhhc--ccceeecCC
Confidence 566677665432 22222 2344555667888877777754433 3333333333332 12222222 222 23556
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCCCCc-ce-e--eecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEc
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDNTSE-TT-V--LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRL 407 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~~~~-~~-~--l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l 407 (758)
-..+++.....+ ...+|| |+..... .. . .+++...+...-|++.+..|+-+.. + ..|+||+-
T Consensus 333 ~~p~~laT~s~D--~T~kIW--D~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~-D--~~IRv~ds 398 (498)
T KOG4328|consen 333 VCPWFLATASLD--QTAKIW--DLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQ-D--NEIRVFDS 398 (498)
T ss_pred CCchheeecccC--cceeee--ehhhhcCCCCcceecccccceeeeeEEcCCCCceEeecc-C--CceEEeec
Confidence 666555554443 123344 4432111 11 1 4455544455567777777543333 3 34777765
No 405
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=89.22 E-value=27 Score=35.45 Aligned_cols=238 Identities=12% Similarity=0.108 Sum_probs=113.9
Q ss_pred EEeeEEEC--CCCC-EEEEEEe-CCCCeEEEEEEEECCCCceeec-cccCc--ceeEEEecCC-e----EEEEEeCCCCC
Q 004368 192 SVGCFQVS--PDNK-LVAYAED-TKGDEIYTVYVIDIETGTPVGK-PLVGV--TASVEWAGNE-A----LVYITMDEILR 259 (758)
Q Consensus 192 ~i~~~~~S--PDG~-~lAy~~~-~~G~e~~~l~v~dl~~g~~~~~-~~~~~--~~~~~wspDg-~----l~y~~~~~~~~ 259 (758)
.+.+..|| ||-+ +||.++- +.-+...+|.-.|.++++.+.. .++.. ..-+.|.||. . ++-++.+
T Consensus 46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D---- 121 (364)
T KOG0290|consen 46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSD---- 121 (364)
T ss_pred ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccC----
Confidence 34455666 4444 6666532 2222345666677778887765 33322 4557899996 2 3333322
Q ss_pred CceEEEEEcCCCCCC--cEEEee-ecCCce---eeEEEEcC-CCcEEEEEecCCcceEEEEEeCC-CCC-ceEEeecccc
Q 004368 260 PDKAWLHKLEADQSN--DICLYH-EKDDIY---SLGLQASE-SKKFLFIASESKITRFVFYLDVS-KPE-ELRVLTPRVV 330 (758)
Q Consensus 260 ~~~v~~~~l~~~~~~--~~~v~~-~~~~~~---~~~~~~S~-Dg~~l~~~s~~~~~~~l~~~d~~-~~~-~~~~l~~~~~ 330 (758)
.|.+++++....+ ...++. ..+..+ ..++.|.. |-++ +.+++-.++.-||-+... .+. +.+.+....+
T Consensus 122 --~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~-igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKE 198 (364)
T KOG0290|consen 122 --FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNL-IGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKE 198 (364)
T ss_pred --eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcce-eEeecccCeEEEEEEeeccccceeeEEEecCcc
Confidence 2445555543211 111221 112222 22455655 4444 444555566666654432 111 2333333333
Q ss_pred ceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCC-CceeeeEEEeCCEE-EEEEEeCCeeEEEEEEcC
Q 004368 331 GVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRE-SVKLQDIQLFIDHL-AVYEREGGLQKITTYRLP 408 (758)
Q Consensus 331 ~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~l-~~~~~~~g~~~l~v~~l~ 408 (758)
-....|+..|..++.....+ +.+...|+......+.+..... ...+..++|.+.-. ++..-.....++.+.++.
T Consensus 199 V~DIaf~~~s~~~FASvgaD----GSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR 274 (364)
T KOG0290|consen 199 VYDIAFLKGSRDVFASVGAD----GSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIR 274 (364)
T ss_pred eeEEEeccCccceEEEecCC----CcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEec
Confidence 23344777666666555554 3455667755333333433322 44566777765322 222222334556677776
Q ss_pred CCCCccccccCCceeeccCcccccCCCCcccCCcEEEEEE
Q 004368 409 AVGEPLKSLQGGKSVEFIDPVYSIDPSESVFSSRILRFHY 448 (758)
Q Consensus 409 ~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d~~~l~~~~ 448 (758)
.-..++ ..+..+..+|-+..+.+.+..-..+.
T Consensus 275 ~P~tpv--------a~L~~H~a~VNgIaWaPhS~~hicta 306 (364)
T KOG0290|consen 275 VPCTPV--------ARLRNHQASVNGIAWAPHSSSHICTA 306 (364)
T ss_pred CCCcce--------ehhhcCcccccceEecCCCCceeeec
Confidence 433322 12233344555666666655544433
No 406
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=88.83 E-value=1.1 Score=34.51 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=27.5
Q ss_pred CCceeEEEEeeCCCCeEEEEEEEeecc-ccccCCCCCEEEEecCCCccCCC
Q 004368 482 NNYFTERKWASASDGTQIPICIVYRKN-LVKLDGSDPLLLYGYGSYEICND 531 (758)
Q Consensus 482 ~~~~~~~~~~~s~dG~~i~~~l~~p~~-~~~~~~~~P~vl~~hGg~~~~~~ 531 (758)
.+|.+|+..+++.||.-+.+.=+.++. .....++.|.|++.||-.+++..
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHH
Confidence 467889999999999988776555444 11244678999999997666544
No 407
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=88.82 E-value=24 Score=42.80 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=67.8
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
.+.|--||+++|.+.-..+...-.|.|+|-+ |..-.. +..+....++|-|.| .++-+...... ..-++.-+-|-.
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd-~~IvffErNGL~ 277 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSD-SDIVFFERNGLR 277 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCC-CcEEEEecCCcc
Confidence 4689999999998765555444789999987 443322 233446679999988 55554433221 111222222221
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCC
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~ 318 (758)
..+-.+-+.. |..-...+.|..++.-|++.......+.|.++-+.+
T Consensus 278 hg~f~l~~p~-de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~N 323 (1265)
T KOG1920|consen 278 HGEFVLPFPL-DEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGN 323 (1265)
T ss_pred ccccccCCcc-cccchheeeecCCCCceeeeecccccceEEEEEecC
Confidence 1111111211 111134678999999888866555555455554443
No 408
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=88.50 E-value=13 Score=37.81 Aligned_cols=141 Identities=12% Similarity=0.107 Sum_probs=79.9
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeecc--ccCcceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKP--LVGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~--~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
.+.+.++.|.-++..+- .|.=..+|.+||+..+..+-.. -.+.+.++.-||+| .+.=.+.+.. +.++
T Consensus 174 kyqltAv~f~d~s~qv~-----sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~t-----vrvw 243 (338)
T KOG0265|consen 174 KYQLTAVGFKDTSDQVI-----SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNT-----VRVW 243 (338)
T ss_pred ceeEEEEEeccccccee-----eccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccce-----EEEE
Confidence 35666777777776653 1222457999999666554321 12235668889999 5554444432 4444
Q ss_pred EcCC--CCCCcEEEeeecCCce---eeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeecccccee--eEEeec
Q 004368 267 KLEA--DQSNDICLYHEKDDIY---SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVD--TAASHR 339 (758)
Q Consensus 267 ~l~~--~~~~~~~v~~~~~~~~---~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~d 339 (758)
++.. ....-+.+|+...-.| .+..+|||+++++.+.+.+ ..+|++|..... .....++..+.. ..|.|.
T Consensus 244 d~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~d---r~vyvwd~~~r~-~lyklpGh~gsvn~~~Fhp~ 319 (338)
T KOG0265|consen 244 DVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSAD---RFVYVWDTTSRR-ILYKLPGHYGSVNEVDFHPT 319 (338)
T ss_pred EecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccccccc---ceEEEeeccccc-EEEEcCCcceeEEEeeecCC
Confidence 4332 1122366777655443 3567899999998765544 347888876643 333334333321 236665
Q ss_pred CCEEE
Q 004368 340 GNHFF 344 (758)
Q Consensus 340 g~~l~ 344 (758)
...+.
T Consensus 320 e~iil 324 (338)
T KOG0265|consen 320 EPIIL 324 (338)
T ss_pred CcEEE
Confidence 55333
No 409
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=88.43 E-value=40 Score=36.27 Aligned_cols=144 Identities=11% Similarity=0.101 Sum_probs=75.7
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCC----ceEEeecc-ccceee-EEeecCCEEEEEEcCCCCCCcEEEEEeC
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPE----ELRVLTPR-VVGVDT-AASHRGNHFFITRRSDELFNSELLACPV 362 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~----~~~~l~~~-~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~ 362 (758)
+++|++.-..-+++......-.+|-+.....+ .++.+..+ ...++. .|.+-...++-...++ .+|...|+
T Consensus 182 glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd----~~L~iwD~ 257 (422)
T KOG0264|consen 182 GLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD----GKLMIWDT 257 (422)
T ss_pred ccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC----CeEEEEEc
Confidence 46788866665555554444444444332221 22233322 222222 2555555555554444 67888888
Q ss_pred CCC-Ccce-eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCCcccC
Q 004368 363 DNT-SETT-VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSESVFS 440 (758)
Q Consensus 363 ~~~-~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~~~~d 440 (758)
... .... .+..+..++.-..|.+.++.++.+...++. |.+|++..=.. ....+..+...|..+.+++.
T Consensus 258 R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~t--V~LwDlRnL~~--------~lh~~e~H~dev~~V~WSPh 327 (422)
T KOG0264|consen 258 RSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKT--VALWDLRNLNK--------PLHTFEGHEDEVFQVEWSPH 327 (422)
T ss_pred CCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCc--EEEeechhccc--------CceeccCCCcceEEEEeCCC
Confidence 741 1222 244455555566777788888877776664 77888762111 22334443333444556666
Q ss_pred CcEEEE
Q 004368 441 SRILRF 446 (758)
Q Consensus 441 ~~~l~~ 446 (758)
..++..
T Consensus 328 ~etvLA 333 (422)
T KOG0264|consen 328 NETVLA 333 (422)
T ss_pred CCceeE
Confidence 666543
No 410
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=88.31 E-value=0.92 Score=41.35 Aligned_cols=38 Identities=18% Similarity=0.314 Sum_probs=27.5
Q ss_pred HhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 576 FTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 576 ~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
.+.+...++.+.++.- +.+|.+.|||.||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 3456666666665543 4899999999999988766654
No 411
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=88.22 E-value=3.5 Score=45.02 Aligned_cols=54 Identities=19% Similarity=0.119 Sum_probs=32.7
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec-cccceeeE-EeecCCEEEEE
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTA-ASHRGNHFFIT 346 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~-~s~dg~~l~~~ 346 (758)
.+.+||||++|+..+.+. . |.++|.++.+ +.-+.+ -..+.... |||||++|+.-
T Consensus 295 ~f~FS~DG~~LA~VSqDG-f--LRvF~fdt~e-Llg~mkSYFGGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 295 EFAFSPDGKYLATVSQDG-F--LRIFDFDTQE-LLGVMKSYFGGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred ceeEcCCCceEEEEecCc-e--EEEeeccHHH-HHHHHHhhccceEEEEEcCCccEEEec
Confidence 356899999998866543 3 4455555544 333333 23444443 99999966543
No 412
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=88.21 E-value=10 Score=39.65 Aligned_cols=146 Identities=12% Similarity=0.159 Sum_probs=77.6
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce----eecccc-----CcceeEEEecCCeEEEEEeCCCCCCc
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP----VGKPLV-----GVTASVEWAGNEALVYITMDEILRPD 261 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~----~~~~~~-----~~~~~~~wspDg~l~y~~~~~~~~~~ 261 (758)
-.+..+.+|.+|++|| .|++.....+|+++.--. .++.+. ..+..++|.-.++++|.... ..
T Consensus 57 GCiNAlqFS~N~~~L~-----SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~----~~ 127 (609)
T KOG4227|consen 57 GCINALQFSHNDRFLA-----SGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGER----WG 127 (609)
T ss_pred cccceeeeccCCeEEe-----ecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCC----cc
Confidence 3578889999999998 455567888888764211 111111 11334677444477787543 34
Q ss_pred eEEEEEcCCCCCCcEEEeeecCCc-eeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-c--eEEeeccccceee-EE
Q 004368 262 KAWLHKLEADQSNDICLYHEKDDI-YSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-E--LRVLTPRVVGVDT-AA 336 (758)
Q Consensus 262 ~v~~~~l~~~~~~~~~v~~~~~~~-~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~--~~~l~~~~~~~~~-~~ 336 (758)
+|..|++.+.+ .+-++.+.+.+ -......+|-...+++.+. ...|.++|..... . +.++......+.. .|
T Consensus 128 ~VI~HDiEt~q--si~V~~~~~~~~~VY~m~~~P~DN~~~~~t~---~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F 202 (609)
T KOG4227|consen 128 TVIKHDIETKQ--SIYVANENNNRGDVYHMDQHPTDNTLIVVTR---AKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF 202 (609)
T ss_pred eeEeeecccce--eeeeecccCcccceeecccCCCCceEEEEec---CceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence 69999999874 34556554421 1223445664333333222 2345556665433 2 2233222222222 25
Q ss_pred eecCCEEEEEEcCC
Q 004368 337 SHRGNHFFITRRSD 350 (758)
Q Consensus 337 s~dg~~l~~~s~~~ 350 (758)
.|-.-.|+.+.+..
T Consensus 203 ~P~~P~Li~~~~~~ 216 (609)
T KOG4227|consen 203 HPETPALILVNSET 216 (609)
T ss_pred cCCCceeEEecccc
Confidence 56555566555554
No 413
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=88.15 E-value=32 Score=36.02 Aligned_cols=111 Identities=10% Similarity=-0.004 Sum_probs=63.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee-e-c-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-G-K-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-~-~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~ 267 (758)
++..+.++.-|++||=.+. ...+.+||.++-... . . .-+...+.+.+-|-| .|+-.+.|. .+..++
T Consensus 152 sv~di~~~a~Gk~l~tcSs-----Dl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~-----tik~We 221 (406)
T KOG0295|consen 152 SVFDISFDASGKYLATCSS-----DLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDN-----TIKAWE 221 (406)
T ss_pred ceeEEEEecCccEEEecCC-----ccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeeccccc-----ceeEEe
Confidence 4778889999998874433 234788887653111 1 1 112246778899998 665444333 366777
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeC
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~ 316 (758)
+.++- -+-.|... +.+.-.+..+-||..++-. +...+-.+|.+..
T Consensus 222 ~~tg~--cv~t~~~h-~ewvr~v~v~~DGti~As~-s~dqtl~vW~~~t 266 (406)
T KOG0295|consen 222 CDTGY--CVKTFPGH-SEWVRMVRVNQDGTIIASC-SNDQTLRVWVVAT 266 (406)
T ss_pred cccce--eEEeccCc-hHhEEEEEecCCeeEEEec-CCCceEEEEEecc
Confidence 77763 33344433 3355557788888654432 2233455665543
No 414
>PRK02888 nitrous-oxide reductase; Validated
Probab=87.98 E-value=28 Score=39.84 Aligned_cols=160 Identities=11% Similarity=0.100 Sum_probs=76.5
Q ss_pred EEEEcCCCcEEEEEecC-CcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCC---
Q 004368 289 GLQASESKKFLFIASES-KITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDN--- 364 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~-~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~--- 364 (758)
.+.+++||+++++++.+ .....+-.++..+.. ......- ...+ .+..+|+..++ + + .++.++|...
T Consensus 239 ~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d-~~vvfni-~~ie-a~vkdGK~~~V--~-g----n~V~VID~~t~~~ 308 (635)
T PRK02888 239 NVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD-WVVVFNI-ARIE-EAVKAGKFKTI--G-G----SKVPVVDGRKAAN 308 (635)
T ss_pred cceECCCCCEEEEeccCcccCcceeeeccccCc-eEEEEch-HHHH-HhhhCCCEEEE--C-C----CEEEEEECCcccc
Confidence 45789999999988733 333456666664433 2222211 1111 24567886665 2 1 3677788654
Q ss_pred -CCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcc-ccccCCceee-ccCcccccCCCCcccCC
Q 004368 365 -TSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPL-KSLQGGKSVE-FIDPVYSIDPSESVFSS 441 (758)
Q Consensus 365 -~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~-~~l~~~~~i~-~p~~~~~i~~~~~~~d~ 441 (758)
.......++-....---.++++++++++. ....+.+.|+++..-.... ..+.....+. -++ . -.......+|+
T Consensus 309 ~~~~v~~yIPVGKsPHGV~vSPDGkylyVa--nklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve-v-GlGPLHTaFDg 384 (635)
T PRK02888 309 AGSALTRYVPVPKNPHGVNTSPDGKYFIAN--GKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE-L-GLGPLHTAFDG 384 (635)
T ss_pred CCcceEEEEECCCCccceEECCCCCEEEEe--CCCCCcEEEEEChhhhhhhhccCCccceEEEeec-c-CCCcceEEECC
Confidence 11122234433221122445555666544 3445567888876311100 0000000010 000 0 01122223444
Q ss_pred cEEEEEEecCCCCCEEEEEECCC
Q 004368 442 RILRFHYSSLRTPPSVYDYDMDM 464 (758)
Q Consensus 442 ~~l~~~~sS~~~P~~i~~~d~~~ 464 (758)
+-- .|+|+-.-+++..+|+.+
T Consensus 385 ~G~--aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 385 RGN--AYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CCC--EEEeEeecceeEEEehHH
Confidence 432 556777777899998765
No 415
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=87.79 E-value=2.4 Score=43.29 Aligned_cols=105 Identities=21% Similarity=0.259 Sum_probs=44.8
Q ss_pred CCCCCEEEEecCCCccCCCCCCChHHHHHHHc---CcEEEEEecCCCCCCchhHHhcccccCCcChHhHH-HHHHHHHHH
Q 004368 513 DGSDPLLLYGYGSYEICNDPAFNSSRLSLLDR---GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDF-IACAEYLIK 588 (758)
Q Consensus 513 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~---G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~-~~~~~~l~~ 588 (758)
..+.|+|| .||-...+..+.-......++++ |.-|..++. |.+.. .+ ...+.. ..+.+. ..+.+-|..
T Consensus 3 ~~~~PvVi-wHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~-~D-~~~s~f----~~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 3 PSPLPVVI-WHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPS-ED-VENSFF----GNVNDQVEQVCEQLAN 74 (279)
T ss_dssp TSS--EEE-E--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHH-HH-HHHHHH----SHHHHHHHHHHHHHHH
T ss_pred CCCCcEEE-EEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcc-hh-hhhhHH----HHHHHHHHHHHHHHhh
Confidence 34567666 49854333222112233445443 766666654 22110 00 000000 112333 334444554
Q ss_pred cCCCCCCcEEEEEeChhHHHHHHHHhhCCC-ceeEEEEc
Q 004368 589 NCYCTKEKLCIEGRSAGGLLIGAVLNMRPD-LFKAAVAA 626 (758)
Q Consensus 589 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~ 626 (758)
..... +-+-++|+|.||.+.=+++.++|+ ..+-.|..
T Consensus 75 ~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISl 112 (279)
T PF02089_consen 75 DPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISL 112 (279)
T ss_dssp -GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEE
T ss_pred Chhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEe
Confidence 33332 679999999999999888888865 35555544
No 416
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=87.65 E-value=45 Score=36.46 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=91.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccC--cceeEEEecCC-eEEEEEeCCCCCCceEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~--~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~ 267 (758)
.+..+...-...+||-+++ +| +|.|..++++..... .++. ...-+.+||-. .++-+..+.+ .|-+++
T Consensus 123 tvt~v~YN~~DeyiAsvs~-gG----diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G----~VtlwD 193 (673)
T KOG4378|consen 123 TVTYVDYNNTDEYIASVSD-GG----DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKG----AVTLWD 193 (673)
T ss_pred eeEEEEecCCcceeEEecc-CC----cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCC----eEEEEe
Confidence 3445555666677775554 23 588888888765432 3332 23346788887 4554544433 366677
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEE
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITR 347 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s 347 (758)
+.+. ....-+.+....-..++.+||....|+++..- ..+|+++|........+|+-...-....|+++|-.|.+-
T Consensus 194 v~g~--sp~~~~~~~HsAP~~gicfspsne~l~vsVG~--Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~~L~aG- 268 (673)
T KOG4378|consen 194 VQGM--SPIFHASEAHSAPCRGICFSPSNEALLVSVGY--DKKINIYDIRSQASTDRLTYSHPLSTVAFSECGTYLCAG- 268 (673)
T ss_pred ccCC--CcccchhhhccCCcCcceecCCccceEEEecc--cceEEEeecccccccceeeecCCcceeeecCCceEEEee-
Confidence 7544 23333433333334467899998888876653 356888888654422333322221233488888766543
Q ss_pred cCCCCCCcEEEEEeCCC
Q 004368 348 RSDELFNSELLACPVDN 364 (758)
Q Consensus 348 ~~~~~~~~~L~~~~~~~ 364 (758)
..+++|+.+|+..
T Consensus 269 ----~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 269 ----NSKGELIAYDMRS 281 (673)
T ss_pred ----cCCceEEEEeccc
Confidence 2357899999875
No 417
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=87.59 E-value=12 Score=41.03 Aligned_cols=116 Identities=21% Similarity=0.199 Sum_probs=72.5
Q ss_pred CCCeEEEEEEEeeccccccCCCCCEEEEecCCCccCCCCCCChHHHHHHH-cCcE-EEEEecCCCCCC---chhHHhccc
Q 004368 494 SDGTQIPICIVYRKNLVKLDGSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFI-FAIAQIRGGGEL---GRQWYENGK 568 (758)
Q Consensus 494 ~dG~~i~~~l~~p~~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~-v~~~~~RG~g~~---G~~~~~~~~ 568 (758)
..+.++- +.+.|-+. +.|+.||.-| |.. ..+|.. ..++. .|.- .++-|.|--||. |.+=++
T Consensus 273 ~~reEi~-yYFnPGD~-----KPPL~VYFSG-yR~--aEGFEg--y~MMk~Lg~PfLL~~DpRleGGaFYlGs~eyE--- 338 (511)
T TIGR03712 273 SKRQEFI-YYFNPGDF-----KPPLNVYFSG-YRP--AEGFEG--YFMMKRLGAPFLLIGDPRLEGGAFYLGSDEYE--- 338 (511)
T ss_pred CCCCeeE-EecCCcCC-----CCCeEEeecc-Ccc--cCcchh--HHHHHhcCCCeEEeeccccccceeeeCcHHHH---
Confidence 3455663 34667665 4699999877 332 334543 22232 3443 566788865541 322121
Q ss_pred ccCCcChHhHHHHHHHH-HHHcCCCCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhh
Q 004368 569 FLKKKNTFTDFIACAEY-LIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLT 634 (758)
Q Consensus 569 ~~~~~~~~~D~~~~~~~-l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~ 634 (758)
.-++..|+. |...| .+.+.+.+.|.|||-+-|+..++.- .-+|+|..=|++++-.
T Consensus 339 --------~~I~~~I~~~L~~Lg-F~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~NLGt 394 (511)
T TIGR03712 339 --------QGIINVIQEKLDYLG-FDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLVNLGT 394 (511)
T ss_pred --------HHHHHHHHHHHHHhC-CCHHHeeeccccccchhhhhhcccC--CCceEEEcCcccchhh
Confidence 334555543 44445 4789999999999999998888763 1389999999998644
No 418
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=87.27 E-value=8.3 Score=42.90 Aligned_cols=85 Identities=11% Similarity=0.128 Sum_probs=55.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQ 272 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~ 272 (758)
+...++||+.++++.+... ..|.++|...+........-...-++|.|||.++.+..+.+ ++...|++-..
T Consensus 262 v~~ca~sp~E~kLvlGC~D-----gSiiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~s~qG----elQ~FD~ALsp 332 (545)
T PF11768_consen 262 VICCARSPSEDKLVLGCED-----GSIILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVGSEQG----ELQCFDMALSP 332 (545)
T ss_pred ceEEecCcccceEEEEecC-----CeEEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEEcCCc----eEEEEEeecCc
Confidence 4567899999999987652 46899998776544322222245589999998777765543 47777777665
Q ss_pred CCcEEEeeecCCce
Q 004368 273 SNDICLYHEKDDIY 286 (758)
Q Consensus 273 ~~~~~v~~~~~~~~ 286 (758)
-+-.++-++..+..
T Consensus 333 i~~qLlsEd~~P~~ 346 (545)
T PF11768_consen 333 IKMQLLSEDATPKS 346 (545)
T ss_pred cceeeccccCCCcc
Confidence 44444445444443
No 419
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.26 E-value=0.79 Score=51.29 Aligned_cols=67 Identities=10% Similarity=0.163 Sum_probs=48.8
Q ss_pred eEEEeccCCCCCCCChHHHHHHHHHHhcCCC-----CceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHH
Q 004368 679 HILVTAGLNDPRVMYSEPAKFVAKLREMKTD-----DNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMR 745 (758)
Q Consensus 679 ~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~-----~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 745 (758)
.||+.||..|+.|++..+..|++++.+.-.. .+++.|-..++.+|..+.......+.+....+|.++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 3999999999999999999999999876422 345666666799998754433334444445677764
No 420
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=87.18 E-value=22 Score=38.52 Aligned_cols=101 Identities=11% Similarity=0.093 Sum_probs=51.0
Q ss_pred ceeEEEecCCeEEEEEeCCCCCCceEEEE-EcCCCC-C--CcEEEeeecCC------ceeeEEEEcCCCcEEEEEecCCc
Q 004368 238 TASVEWAGNEALVYITMDEILRPDKAWLH-KLEADQ-S--NDICLYHEKDD------IYSLGLQASESKKFLFIASESKI 307 (758)
Q Consensus 238 ~~~~~wspDg~l~y~~~~~~~~~~~v~~~-~l~~~~-~--~~~~v~~~~~~------~~~~~~~~S~Dg~~l~~~s~~~~ 307 (758)
..+++|.+|| +|. +.. .+|++. +...+. . +.+.++..-.. ....++.|.|||+ |+++..+..
T Consensus 74 p~Gi~~~~~G-lyV-~~~-----~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G~~~ 145 (367)
T TIGR02604 74 VTGLAVAVGG-VYV-ATP-----PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHGNTL 145 (367)
T ss_pred ccceeEecCC-EEE-eCC-----CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecccCC
Confidence 3568999998 544 321 146655 332211 1 22334332111 1223578999995 566544210
Q ss_pred -----------------ceEEEEEeCCCCCceEEeeccccc-eeeEEeecCCEEEEEEc
Q 004368 308 -----------------TRFVFYLDVSKPEELRVLTPRVVG-VDTAASHRGNHFFITRR 348 (758)
Q Consensus 308 -----------------~~~l~~~d~~~~~~~~~l~~~~~~-~~~~~s~dg~~l~~~s~ 348 (758)
...++.++.++++ ...+.....+ ....|+++|+ +++.-|
T Consensus 146 ~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~-~e~~a~G~rnp~Gl~~d~~G~-l~~tdn 202 (367)
T TIGR02604 146 ASKVTRPGTSDESRQGLGGGLFRYNPDGGK-LRVVAHGFQNPYGHSVDSWGD-VFFCDN 202 (367)
T ss_pred CceeccCCCccCcccccCceEEEEecCCCe-EEEEecCcCCCccceECCCCC-EEEEcc
Confidence 1357888887765 5555443222 2234777765 444434
No 421
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=87.14 E-value=13 Score=35.92 Aligned_cols=112 Identities=23% Similarity=0.292 Sum_probs=67.7
Q ss_pred eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC--cceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 190 FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 190 ~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
.-.+.++.+-|.|++|| .|.+.....++|+.+|+..+.--+. -+..+.|||.. .++-.+.+. ++.+.
T Consensus 231 ssavaav~vdpsgrll~-----sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~-----~iklt 300 (350)
T KOG0641|consen 231 SSAVAAVAVDPSGRLLA-----SGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDM-----KIKLT 300 (350)
T ss_pred cceeEEEEECCCcceee-----eccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccc-----eEEEe
Confidence 45778889999999998 4555677888999999987642222 25668999987 444334443 46666
Q ss_pred EcCCCCCC--cEEEeee-cCCceeeEEEEcCCCcEEEEEecCCcceEEEEE
Q 004368 267 KLEADQSN--DICLYHE-KDDIYSLGLQASESKKFLFIASESKITRFVFYL 314 (758)
Q Consensus 267 ~l~~~~~~--~~~v~~~-~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~ 314 (758)
++..+-.. ...+..| +|. .+...|.|.. +-+++++...+..+|.+
T Consensus 301 dlqgdla~el~~~vv~ehkdk--~i~~rwh~~d-~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 301 DLQGDLAHELPIMVVAEHKDK--AIQCRWHPQD-FSFISSSADKTATLWAL 348 (350)
T ss_pred ecccchhhcCceEEEEeccCc--eEEEEecCcc-ceeeeccCcceEEEecc
Confidence 66544322 1223333 333 3456788864 33444444444556654
No 422
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=86.88 E-value=39 Score=34.46 Aligned_cols=98 Identities=12% Similarity=0.017 Sum_probs=64.0
Q ss_pred CCeEEEEEEEECCCCceeec-cccCcceeEEEecCC---eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceee
Q 004368 213 GDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE---ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSL 288 (758)
Q Consensus 213 G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg---~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~ 288 (758)
++-.-+|.|||..|-+...+ ..++.+.+-+|||=. .++.+..+ ..+|.+-++.++. -.-.+.+... -.+
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr----~~~VrLCDi~SGs--~sH~LsGHr~-~vl 192 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTR----DVQVRLCDIASGS--FSHTLSGHRD-GVL 192 (397)
T ss_pred ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecC----CCcEEEEeccCCc--ceeeeccccC-ceE
Confidence 45557899999988665543 556655557899976 35444433 3357777888773 2233433332 345
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCC
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVS 317 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~ 317 (758)
.+.|||...|++.+....+.-++|-+.-.
T Consensus 193 aV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 193 AVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred EEEeccCceeEEEecCCCceEEEEEeecc
Confidence 78999999999988776666666655444
No 423
>PRK13614 lipoprotein LpqB; Provisional
Probab=86.75 E-value=33 Score=39.32 Aligned_cols=161 Identities=13% Similarity=-0.003 Sum_probs=85.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC-cceeEEEecCCeEEEEEeCCCCCCceEEEEEc-C
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKL-E 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l-~ 269 (758)
.+.++.+|+||+.+|+... . ...+++... ++.... .+.+ ....+.|.++|.++ +..+.. +.+|.+.+- +
T Consensus 344 ~~~s~avS~~g~~~A~~~~---~-~~~l~~~~~-g~~~~~-~~~g~~Lt~PS~d~~g~vW-tv~~g~--~~~vv~~~~~g 414 (573)
T PRK13614 344 GPASPAESPVSQTVAFLNG---S-RTTLYTVSP-GQPARA-LTSGSTLTRPSFSPQDWVW-TAGPGG--NGRIVAYRPTG 414 (573)
T ss_pred cccceeecCCCceEEEecC---C-CcEEEEecC-CCccee-eecCCCccCCcccCCCCEE-EeeCCC--CceEEEEecCC
Confidence 4667899999999999732 2 257777665 333322 2222 24568898888444 433321 224555332 2
Q ss_pred CCCCC--c--EEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeC---CCCCceEEeeccc------cceeeEE
Q 004368 270 ADQSN--D--ICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV---SKPEELRVLTPRV------VGVDTAA 336 (758)
Q Consensus 270 ~~~~~--~--~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~---~~~~~~~~l~~~~------~~~~~~~ 336 (758)
++... . ......-+..-...+..|+||-.+++.....+..+|++.-+ .++. ++.|+... ......|
T Consensus 415 ~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~-P~~L~~~~~~~~~~~~~sl~W 493 (573)
T PRK13614 415 VAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGT-PRELTAPITLAADSDADTGAW 493 (573)
T ss_pred CcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCC-eEEccCceecccCCCcceeEE
Confidence 21100 0 11111111222446789999999988775555556666332 2332 44443221 1122347
Q ss_pred eecCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 337 SHRGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 337 s~dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
..++ .|++++... ..+..++.+.+..
T Consensus 494 ~~~~-sl~V~~~~~-~~~~~~~~v~v~~ 519 (573)
T PRK13614 494 VGDS-TVVVTKASA-TSNVVPELLSVDA 519 (573)
T ss_pred cCCC-EEEEEeccC-CCcceEEEEEeCC
Confidence 6654 477776554 2455677777743
No 424
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=86.64 E-value=39 Score=36.49 Aligned_cols=110 Identities=17% Similarity=0.265 Sum_probs=54.3
Q ss_pred eeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCC-EEEEEEcCCCCCCcEEEEEeCCCC
Q 004368 287 SLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGN-HFFITRRSDELFNSELLACPVDNT 365 (758)
Q Consensus 287 ~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~-~l~~~s~~~~~~~~~L~~~~~~~~ 365 (758)
.+.++.|+||+||+... ....|.++|.++.+..+.+..+.+.+....-..|. .+|..+.+. .+-.++++..
T Consensus 205 il~~avS~Dgkylatgg---~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr-----svkvw~~~~~ 276 (479)
T KOG0299|consen 205 ILTLAVSSDGKYLATGG---RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR-----SVKVWSIDQL 276 (479)
T ss_pred eEEEEEcCCCcEEEecC---CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC-----ceEEEehhHh
Confidence 45678999999988632 23456678888876333333333333222112232 344333221 2333333321
Q ss_pred CcceeeecCCCCceeeeEEEeC-CEEEEEEEeCCeeEEEEEEcC
Q 004368 366 SETTVLIPHRESVKLQDIQLFI-DHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 366 ~~~~~l~~~~~~~~~~~~~~~~-~~l~~~~~~~g~~~l~v~~l~ 408 (758)
+....++.++. .+.+++... .+++-+.-++.. +++|.++
T Consensus 277 s~vetlyGHqd--~v~~IdaL~reR~vtVGgrDrT--~rlwKi~ 316 (479)
T KOG0299|consen 277 SYVETLYGHQD--GVLGIDALSRERCVTVGGRDRT--VRLWKIP 316 (479)
T ss_pred HHHHHHhCCcc--ceeeechhcccceEEeccccce--eEEEecc
Confidence 12222555543 345665544 455555545554 5567775
No 425
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=86.58 E-value=1.6 Score=45.13 Aligned_cols=141 Identities=15% Similarity=0.205 Sum_probs=78.4
Q ss_pred CceEEeecccccCCCC---eEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCc-eeecccc--CcceeEEEecCC
Q 004368 174 PEHLILDENVKAEGRG---FYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-PVGKPLV--GVTASVEWAGNE 247 (758)
Q Consensus 174 ~~~vllD~n~~~~~~~---~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~-~~~~~~~--~~~~~~~wspDg 247 (758)
...+|+|..+-..-.. ...-..+.|+|. -..|+. |+|.++||.+|+..=+ ++..-.+ ...-++.|||-|
T Consensus 210 rsIvLyD~R~~~Pl~KVi~~mRTN~IswnPe--afnF~~---a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG 284 (433)
T KOG0268|consen 210 RSIVLYDLRQASPLKKVILTMRTNTICWNPE--AFNFVA---ANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTG 284 (433)
T ss_pred CceEEEecccCCccceeeeeccccceecCcc--ccceee---ccccccceehhhhhhcccchhhcccceeEEEeccCCCc
Confidence 4467777654332111 112346789993 233443 6778999999975321 1111111 235568999999
Q ss_pred -eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEee
Q 004368 248 -ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLT 326 (758)
Q Consensus 248 -~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~ 326 (758)
.|+-.+.|.. +.+..+..+... -+|....-...+.+.||-|.+||+- .++..+-+||...... .+-+++
T Consensus 285 ~EfvsgsyDks-----IRIf~~~~~~SR--diYhtkRMq~V~~Vk~S~Dskyi~S-GSdd~nvRlWka~Ase--klgv~t 354 (433)
T KOG0268|consen 285 QEFVSGSYDKS-----IRIFPVNHGHSR--DIYHTKRMQHVFCVKYSMDSKYIIS-GSDDGNVRLWKAKASE--KLGVIT 354 (433)
T ss_pred chhccccccce-----EEEeecCCCcch--hhhhHhhhheeeEEEEeccccEEEe-cCCCcceeeeecchhh--hcCCCC
Confidence 6766666553 444455444332 2443333333457899999999753 4444556778766543 233445
Q ss_pred ccc
Q 004368 327 PRV 329 (758)
Q Consensus 327 ~~~ 329 (758)
+++
T Consensus 355 ~rE 357 (433)
T KOG0268|consen 355 PRE 357 (433)
T ss_pred hhH
Confidence 443
No 426
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=86.54 E-value=24 Score=40.52 Aligned_cols=197 Identities=9% Similarity=-0.057 Sum_probs=102.6
Q ss_pred CceEEeecccccC--------CCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc--ceeEEE
Q 004368 174 PEHLILDENVKAE--------GRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV--TASVEW 243 (758)
Q Consensus 174 ~~~vllD~n~~~~--------~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~w 243 (758)
+.-++.|.|.... +| ..++..+.|++-.-.|..+-.. ...|.+||+....-......+. +..+.|
T Consensus 110 G~i~vWdlnk~~rnk~l~~f~EH-~Rs~~~ldfh~tep~iliSGSQ----Dg~vK~~DlR~~~S~~t~~~nSESiRDV~f 184 (839)
T KOG0269|consen 110 GVISVWDLNKSIRNKLLTVFNEH-ERSANKLDFHSTEPNILISGSQ----DGTVKCWDLRSKKSKSTFRSNSESIRDVKF 184 (839)
T ss_pred CcEEEEecCccccchhhhHhhhh-ccceeeeeeccCCccEEEecCC----CceEEEEeeecccccccccccchhhhceee
Confidence 4567777776211 12 2467788898888877765444 4589999998776655322222 556899
Q ss_pred ecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC--
Q 004368 244 AGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-- 320 (758)
Q Consensus 244 spDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-- 320 (758)
+|-- ..|+...+.+ -|-.++|..... -..-+.. .....+.+.|+|++.||+-. ++.....|| |..++.
T Consensus 185 sp~~~~~F~s~~dsG----~lqlWDlRqp~r-~~~k~~A-H~GpV~c~nwhPnr~~lATG-GRDK~vkiW--d~t~~~~~ 255 (839)
T KOG0269|consen 185 SPGYGNKFASIHDSG----YLQLWDLRQPDR-CEKKLTA-HNGPVLCLNWHPNREWLATG-GRDKMVKIW--DMTDSRAK 255 (839)
T ss_pred ccCCCceEEEecCCc----eEEEeeccCchh-HHHHhhc-ccCceEEEeecCCCceeeec-CCCccEEEE--eccCCCcc
Confidence 9976 4444444433 255667654311 1112222 22334567899998887643 333445555 444433
Q ss_pred ceEEeeccccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeC
Q 004368 321 ELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFI 387 (758)
Q Consensus 321 ~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 387 (758)
....+.....-...-|-|+-.+.+..+... ....|.++|+.-|=..-..+.+. ...+.++.|..
T Consensus 256 ~~~tInTiapv~rVkWRP~~~~hLAtcsmv--~dtsV~VWDvrRPYIP~~t~~eH-~~~vt~i~W~~ 319 (839)
T KOG0269|consen 256 PKHTINTIAPVGRVKWRPARSYHLATCSMV--VDTSVHVWDVRRPYIPYATFLEH-TDSVTGIAWDS 319 (839)
T ss_pred ceeEEeecceeeeeeeccCccchhhhhhcc--ccceEEEEeeccccccceeeecc-CccccceeccC
Confidence 122221111101122667655433333322 24678888876542222222222 22455666665
No 427
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=85.93 E-value=43 Score=34.06 Aligned_cols=33 Identities=36% Similarity=0.378 Sum_probs=26.2
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV 230 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~ 230 (758)
-...+||||+..|||+.+. .+|+|+|+.+.+..
T Consensus 46 WRkl~WSpD~tlLa~a~S~-----G~i~vfdl~g~~lf 78 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAEST-----GTIRVFDLMGSELF 78 (282)
T ss_pred heEEEECCCCcEEEEEcCC-----CeEEEEecccceeE
Confidence 4567999999999999873 36889999876554
No 428
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=85.86 E-value=33 Score=37.08 Aligned_cols=60 Identities=22% Similarity=0.188 Sum_probs=39.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-c-ccCcceeEEEecCC-eEEEEEeCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNE-ALVYITMDE 256 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~wspDg-~l~y~~~~~ 256 (758)
.+-..++||||++||++- -...|.|||..+.+.+.. . ..+.+.+.+|-..- .+|-.+.|.
T Consensus 204 eil~~avS~Dgkylatgg-----~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr 266 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGG-----RDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR 266 (479)
T ss_pred eeEEEEEcCCCcEEEecC-----CCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC
Confidence 455679999999999642 246788999999988764 1 22335567774333 565555443
No 429
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=85.65 E-value=9.3 Score=43.70 Aligned_cols=119 Identities=11% Similarity=0.103 Sum_probs=73.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee--eccc-cCcceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV--GKPL-VGVTASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~--~~~~-~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
++..++|||--...-++...+| .|..||+..-..- +.+. .+......|+|++.++.+.. |...+.+++.
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGG----RDK~vkiWd~ 249 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGG----RDKMVKIWDM 249 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecC----CCccEEEEec
Confidence 5778889986555545555555 5888898643321 1121 23355579999874444443 3334666677
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
++.............+ .-.+.|-|+..+.+.++..-....|+++|+..+-
T Consensus 250 t~~~~~~~~tInTiap--v~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPY 299 (839)
T KOG0269|consen 250 TDSRAKPKHTINTIAP--VGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPY 299 (839)
T ss_pred cCCCccceeEEeecce--eeeeeeccCccchhhhhhccccceEEEEeecccc
Confidence 7654433333322222 2357899999988777777677788999987654
No 430
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=85.39 E-value=1.2 Score=41.43 Aligned_cols=39 Identities=18% Similarity=0.162 Sum_probs=26.4
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCC
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 617 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p 617 (758)
..+...++....+ ....+|.++|||+||.++..++....
T Consensus 12 ~~i~~~~~~~~~~--~p~~~i~v~GHSlGg~lA~l~a~~~~ 50 (153)
T cd00741 12 NLVLPLLKSALAQ--YPDYKIHVTGHSLGGALAGLAGLDLR 50 (153)
T ss_pred HHHHHHHHHHHHH--CCCCeEEEEEcCHHHHHHHHHHHHHH
Confidence 3344444443332 24589999999999999988777654
No 431
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=85.35 E-value=46 Score=33.87 Aligned_cols=162 Identities=8% Similarity=0.060 Sum_probs=83.1
Q ss_pred CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-eeEEeecCCEEEEEEcCCCCCCcEEEEEe
Q 004368 283 DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACP 361 (758)
Q Consensus 283 ~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~ 361 (758)
...|.-++.+..|| .|+-++..-+.|.|..+|+++++ ...-.+-.... .-.+..-+++||-+|.++ ...++.|
T Consensus 43 ~~aFTQGL~~~~~g-~LyESTG~yG~S~l~~~d~~tg~-~~~~~~l~~~~FgEGit~~~d~l~qLTWk~----~~~f~yd 116 (264)
T PF05096_consen 43 PTAFTQGLEFLDDG-TLYESTGLYGQSSLRKVDLETGK-VLQSVPLPPRYFGEGITILGDKLYQLTWKE----GTGFVYD 116 (264)
T ss_dssp TT-EEEEEEEEETT-EEEEEECSTTEEEEEEEETTTSS-EEEEEE-TTT--EEEEEEETTEEEEEESSS----SEEEEEE
T ss_pred CcccCccEEecCCC-EEEEeCCCCCcEEEEEEECCCCc-EEEEEECCccccceeEEEECCEEEEEEecC----CeEEEEc
Confidence 34455567675565 46677777788999999999987 32222211111 112555688999999986 4678888
Q ss_pred CCCCCcceeeecC-CCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCcccccCCCC-ccc
Q 004368 362 VDNTSETTVLIPH-RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSIDPSE-SVF 439 (758)
Q Consensus 362 ~~~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i~~~~-~~~ 439 (758)
.++..... -++. .+. =+++.+++.|+ ..+|.++|+.++... -+.. +.+........+...| ..+
T Consensus 117 ~~tl~~~~-~~~y~~EG---WGLt~dg~~Li---~SDGS~~L~~~dP~~-f~~~------~~i~V~~~g~pv~~LNELE~ 182 (264)
T PF05096_consen 117 PNTLKKIG-TFPYPGEG---WGLTSDGKRLI---MSDGSSRLYFLDPET-FKEV------RTIQVTDNGRPVSNLNELEY 182 (264)
T ss_dssp TTTTEEEE-EEE-SSS-----EEEECSSCEE---EE-SSSEEEEE-TTT--SEE------EEEE-EETTEE---EEEEEE
T ss_pred cccceEEE-EEecCCcc---eEEEcCCCEEE---EECCccceEEECCcc-cceE------EEEEEEECCEECCCcEeEEE
Confidence 76532211 1221 111 13345566665 347888888776442 1111 2222211111111111 112
Q ss_pred CCcEEEEEEecCCCCCEEEEEECCCCcE
Q 004368 440 SSRILRFHYSSLRTPPSVYDYDMDMGIS 467 (758)
Q Consensus 440 d~~~l~~~~sS~~~P~~i~~~d~~~~~~ 467 (758)
-.+.++... =.-+.|+++|+.+|+.
T Consensus 183 i~G~IyANV---W~td~I~~Idp~tG~V 207 (264)
T PF05096_consen 183 INGKIYANV---WQTDRIVRIDPETGKV 207 (264)
T ss_dssp ETTEEEEEE---TTSSEEEEEETTT-BE
T ss_pred EcCEEEEEe---CCCCeEEEEeCCCCeE
Confidence 233444333 2457899999999984
No 432
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=85.07 E-value=8.4 Score=39.49 Aligned_cols=130 Identities=19% Similarity=0.263 Sum_probs=75.4
Q ss_pred ceEEeecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce------eeccccCcceeEEEecCC-
Q 004368 175 EHLILDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP------VGKPLVGVTASVEWAGNE- 247 (758)
Q Consensus 175 ~~vllD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~------~~~~~~~~~~~~~wspDg- 247 (758)
.-|||--|.- ...+.|||.+.++|..+ |. -.|-|.-.+..+. ...++...+..+.|.|++
T Consensus 93 tlvLlRiNrA--------At~V~WsP~enkFAVgS---ga--r~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnV 159 (361)
T KOG1523|consen 93 TLVLLRINRA--------ATCVKWSPKENKFAVGS---GA--RLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNV 159 (361)
T ss_pred ceeEEEeccc--------eeeEeecCcCceEEecc---Cc--cEEEEEEEecccceehhhhhCCccccceeeeeccCCcc
Confidence 3456655532 23579999999998654 22 2344443333221 122445556779999999
Q ss_pred eEEEEEeCCCCCCceEEEEEcCCCCCC----cEEEe-----ee-cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCC
Q 004368 248 ALVYITMDEILRPDKAWLHKLEADQSN----DICLY-----HE-KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVS 317 (758)
Q Consensus 248 ~l~y~~~~~~~~~~~v~~~~l~~~~~~----~~~v~-----~~-~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~ 317 (758)
.++-.+.|..-|-...|+..++...+. ....| +- ..+.+..++.|||+|..|.+...+. -+.+.|..
T Consensus 160 LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds---~v~~~da~ 236 (361)
T KOG1523|consen 160 LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDS---TVSFVDAA 236 (361)
T ss_pred eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCC---ceEEeecC
Confidence 666665565555555666666544321 11112 11 2244556788999999998876543 35677766
Q ss_pred CCC
Q 004368 318 KPE 320 (758)
Q Consensus 318 ~~~ 320 (758)
++.
T Consensus 237 ~p~ 239 (361)
T KOG1523|consen 237 GPS 239 (361)
T ss_pred CCc
Confidence 543
No 433
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=85.06 E-value=57 Score=34.73 Aligned_cols=117 Identities=16% Similarity=0.214 Sum_probs=59.1
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCce-eec-ccc-------CcceeEEEecC----C--eEEEEEeCC--
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTP-VGK-PLV-------GVTASVEWAGN----E--ALVYITMDE-- 256 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~-~~~-~~~-------~~~~~~~wspD----g--~l~y~~~~~-- 256 (758)
.+++|.|||+. |...+.| .|++++. .|.. ... .+. ...-++++.|+ + .++|+..+.
T Consensus 5 ~~~a~~pdG~l--~v~e~~G----~i~~~~~-~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 5 RSMAFLPDGRL--LVAERSG----RIWVVDK-DGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp EEEEEETTSCE--EEEETTT----EEEEEET-TTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred eEEEEeCCCcE--EEEeCCc----eEEEEeC-CCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 46789999976 4455566 5888883 4433 111 111 11345788885 4 344443311
Q ss_pred CCCCceEEEEEcCCCC---CCcEEEeee-cC----CceeeEEEEcCCCcEEEEEecCCc-----------ceEEEEEeCC
Q 004368 257 ILRPDKAWLHKLEADQ---SNDICLYHE-KD----DIYSLGLQASESKKFLFIASESKI-----------TRFVFYLDVS 317 (758)
Q Consensus 257 ~~~~~~v~~~~l~~~~---~~~~~v~~~-~~----~~~~~~~~~S~Dg~~l~~~s~~~~-----------~~~l~~~d~~ 317 (758)
......|.+..+..+. .....++.. +. ......+.+.||| +|+++..+.. ...|.+++.+
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d 156 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPD 156 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETT
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEeccc
Confidence 2223457766665431 112223322 21 2233457899999 7888775422 2368888876
Q ss_pred C
Q 004368 318 K 318 (758)
Q Consensus 318 ~ 318 (758)
+
T Consensus 157 G 157 (331)
T PF07995_consen 157 G 157 (331)
T ss_dssp S
T ss_pred C
Confidence 5
No 434
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=84.63 E-value=58 Score=36.34 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=22.5
Q ss_pred eeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCC
Q 004368 194 GCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETG 227 (758)
Q Consensus 194 ~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g 227 (758)
..+.+||||+||.- .|.-..+|.++|++.=
T Consensus 55 t~ik~s~DGqY~lA----tG~YKP~ikvydlanL 84 (703)
T KOG2321|consen 55 TRIKVSPDGQYLLA----TGTYKPQIKVYDLANL 84 (703)
T ss_pred ceeEecCCCcEEEE----ecccCCceEEEEcccc
Confidence 46789999999863 2444578999998763
No 435
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=84.33 E-value=7.9 Score=41.93 Aligned_cols=128 Identities=15% Similarity=0.169 Sum_probs=55.5
Q ss_pred EEEEEEECCCCceeec-ccc--C-cceeEEEe--cCCeEEEEEeCCCCCCceEEEEEc-CCCC--CCcEEEeee-c---C
Q 004368 217 YTVYVIDIETGTPVGK-PLV--G-VTASVEWA--GNEALVYITMDEILRPDKAWLHKL-EADQ--SNDICLYHE-K---D 283 (758)
Q Consensus 217 ~~l~v~dl~~g~~~~~-~~~--~-~~~~~~ws--pDg~l~y~~~~~~~~~~~v~~~~l-~~~~--~~~~~v~~~-~---~ 283 (758)
.+|++||+.+.+.++. .+. + ..-.+.|. |+..--|+... ....||+.-- ..+. .+.+.-... + .
T Consensus 222 ~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~a---Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~ 298 (461)
T PF05694_consen 222 HSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCA---LSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGW 298 (461)
T ss_dssp -EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE-----EEEEEEEE-ETTEEEEEEEEEE--EE--SS
T ss_pred CeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEe---ccceEEEEEEcCCCCeeeeEEEECCCcccCcc
Confidence 6899999999988763 332 1 22235555 44434444321 1223443322 1110 011111110 0 0
Q ss_pred ------------CceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec-ccc------------------c-
Q 004368 284 ------------DIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVV------------------G- 331 (758)
Q Consensus 284 ------------~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~-~~~------------------~- 331 (758)
+....++..|-|.|+|+++..- ..+|..+|+.++..++.+-. ... +
T Consensus 299 ~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~--~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgP 376 (461)
T PF05694_consen 299 ILPEMLKPFGAVPPLITDILISLDDRFLYVSNWL--HGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGP 376 (461)
T ss_dssp ---GGGGGG-EE------EEE-TTS-EEEEEETT--TTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S--
T ss_pred cccccccccccCCCceEeEEEccCCCEEEEEccc--CCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCC
Confidence 2344578899999999986543 34677788877653333211 000 1
Q ss_pred eeeEEeecCCEEEEEEcC
Q 004368 332 VDTAASHRGNHFFITRRS 349 (758)
Q Consensus 332 ~~~~~s~dg~~l~~~s~~ 349 (758)
.....|-||++||+.+..
T Consensus 377 qMvqlS~DGkRlYvTnSL 394 (461)
T PF05694_consen 377 QMVQLSLDGKRLYVTNSL 394 (461)
T ss_dssp --EEE-TTSSEEEEE---
T ss_pred CeEEEccCCeEEEEEeec
Confidence 112478899999988653
No 436
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=84.26 E-value=5.9 Score=41.40 Aligned_cols=127 Identities=17% Similarity=0.167 Sum_probs=72.6
Q ss_pred eecccccCCCCeEEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceee----ccccCcceeEEEecCCeEEEEEe
Q 004368 179 LDENVKAEGRGFYSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVG----KPLVGVTASVEWAGNEALVYITM 254 (758)
Q Consensus 179 lD~n~~~~~~~~~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~----~~~~~~~~~~~wspDg~l~y~~~ 254 (758)
+|.+-+.. | ..++..++|||..+-+.++.+..| .|.|||+..+.-.. .....-+.-+.|+.+-.++....
T Consensus 248 vd~~Pf~g-H-~~SVEDLqWSptE~~vfaScS~Dg----sIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~ 321 (440)
T KOG0302|consen 248 VDQRPFTG-H-TKSVEDLQWSPTEDGVFASCSCDG----SIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGG 321 (440)
T ss_pred ecCccccc-c-ccchhhhccCCccCceEEeeecCc----eEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecC
Confidence 35555542 2 357889999999999988888777 49999998874322 11122245578976654333333
Q ss_pred CCCCCCceEEEEEcCCCCC-CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeC
Q 004368 255 DEILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDV 316 (758)
Q Consensus 255 ~~~~~~~~v~~~~l~~~~~-~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~ 316 (758)
|++ - +.+++|..-+. ..+..|.-....+ .++.|+|....++..+.....--||-+.+
T Consensus 322 DdG--t--~~iwDLR~~~~~~pVA~fk~Hk~pI-tsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 322 DDG--T--LSIWDLRQFKSGQPVATFKYHKAPI-TSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred CCc--e--EEEEEhhhccCCCcceeEEeccCCe-eEEEeccccCceEEeccCCCcEEEEEeec
Confidence 322 1 23333332211 2444555443333 37899997777666555554444454433
No 437
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=83.94 E-value=66 Score=34.69 Aligned_cols=151 Identities=11% Similarity=0.109 Sum_probs=83.9
Q ss_pred EEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCC
Q 004368 241 VEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (758)
Q Consensus 241 ~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~ 319 (758)
++|.-.- .+++...- ...|.++++.++.. ...++..... .-.+.|.|-.-.++++..-. ..+-+.|+...
T Consensus 249 Ls~n~~~~nVLaSgsa----D~TV~lWD~~~g~p--~~s~~~~~k~-Vq~l~wh~~~p~~LLsGs~D--~~V~l~D~R~~ 319 (463)
T KOG0270|consen 249 LSWNRNFRNVLASGSA----DKTVKLWDVDTGKP--KSSITHHGKK-VQTLEWHPYEPSVLLSGSYD--GTVALKDCRDP 319 (463)
T ss_pred HHhccccceeEEecCC----CceEEEEEcCCCCc--ceehhhcCCc-eeEEEecCCCceEEEecccc--ceEEeeeccCc
Confidence 5565554 45555432 23588889988854 3344322222 22567888665555544332 33556666532
Q ss_pred CceEEeeccccceee-EEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCccee-eecCCCCceeeeEEEeC--CEEEEEEE
Q 004368 320 EELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFI--DHLAVYER 395 (758)
Q Consensus 320 ~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~--~~l~~~~~ 395 (758)
...-.-.+....++- .|.|.....++.+..+ +.|+.+|+..++...| +..++. .+.+++... ..++.+..
T Consensus 320 ~~s~~~wk~~g~VEkv~w~~~se~~f~~~tdd----G~v~~~D~R~~~~~vwt~~AHd~--~ISgl~~n~~~p~~l~t~s 393 (463)
T KOG0270|consen 320 SNSGKEWKFDGEVEKVAWDPHSENSFFVSTDD----GTVYYFDIRNPGKPVWTLKAHDD--EISGLSVNIQTPGLLSTAS 393 (463)
T ss_pred cccCceEEeccceEEEEecCCCceeEEEecCC----ceEEeeecCCCCCceeEEEeccC--CcceEEecCCCCcceeecc
Confidence 200011111223443 3888888777777655 5799999988777777 555554 456666654 34544544
Q ss_pred eCCeeEEEEEEcC
Q 004368 396 EGGLQKITTYRLP 408 (758)
Q Consensus 396 ~~g~~~l~v~~l~ 408 (758)
.++ .+.+|+++
T Consensus 394 ~d~--~Vklw~~~ 404 (463)
T KOG0270|consen 394 TDK--VVKLWKFD 404 (463)
T ss_pred ccc--eEEEEeec
Confidence 444 46677776
No 438
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=83.93 E-value=41 Score=34.68 Aligned_cols=68 Identities=19% Similarity=0.222 Sum_probs=44.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceEEEEEcC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKAWLHKLE 269 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~ 269 (758)
.+..+++.|.||. |.++. | ...|+.|||-.|+.-.. .+......+.|+|.| +|+....+ .|-.+.++
T Consensus 129 ~Vt~lsiHPS~KL-ALsVg--~--D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~------~i~i~q~d 197 (362)
T KOG0294|consen 129 QVTDLSIHPSGKL-ALSVG--G--DQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN------KIDIYQLD 197 (362)
T ss_pred ccceeEecCCCce-EEEEc--C--CceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc------EEEEEecc
Confidence 3788899999985 55553 3 24688999988875432 555555569999999 55544432 25455555
Q ss_pred C
Q 004368 270 A 270 (758)
Q Consensus 270 ~ 270 (758)
.
T Consensus 198 ~ 198 (362)
T KOG0294|consen 198 N 198 (362)
T ss_pred c
Confidence 4
No 439
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=83.61 E-value=13 Score=30.90 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=41.4
Q ss_pred EEEcCCCcEEEEEecC---------------CcceEEEEEeCCCCCceEEeeccccce-eeEEeecCCEEEEEEcCCCCC
Q 004368 290 LQASESKKFLFIASES---------------KITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELF 353 (758)
Q Consensus 290 ~~~S~Dg~~l~~~s~~---------------~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~ 353 (758)
+...+++..|+|+..+ ..+.+|+.+|..+++ .+.|..+..-- ...+++|++.+++.-..
T Consensus 3 ldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~-~~vl~~~L~fpNGVals~d~~~vlv~Et~---- 77 (89)
T PF03088_consen 3 LDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKE-TTVLLDGLYFPNGVALSPDESFVLVAETG---- 77 (89)
T ss_dssp EEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTE-EEEEEEEESSEEEEEE-TTSSEEEEEEGG----
T ss_pred eeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCe-EEEehhCCCccCeEEEcCCCCEEEEEecc----
Confidence 4556675566666543 234689999999986 66665442211 22389999988777543
Q ss_pred CcEEEEEeCCC
Q 004368 354 NSELLACPVDN 364 (758)
Q Consensus 354 ~~~L~~~~~~~ 364 (758)
..+|.+.-+.+
T Consensus 78 ~~Ri~rywl~G 88 (89)
T PF03088_consen 78 RYRILRYWLKG 88 (89)
T ss_dssp GTEEEEEESSS
T ss_pred CceEEEEEEeC
Confidence 47888887765
No 440
>PLN02633 palmitoyl protein thioesterase family protein
Probab=83.54 E-value=10 Score=39.36 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=58.1
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHHc-CcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLDR-GFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
.+.|+||+ ||-......++.....+.+.+. |.-+.++.+- .+ .-..| -.+..+.+..+.+.|.+....
T Consensus 24 ~~~P~Viw-HG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~ig-~~-~~~s~--------~~~~~~Qve~vce~l~~~~~l 92 (314)
T PLN02633 24 VSVPFIML-HGIGTQCSDATNANFTQLLTNLSGSPGFCLEIG-NG-VGDSW--------LMPLTQQAEIACEKVKQMKEL 92 (314)
T ss_pred CCCCeEEe-cCCCcccCCchHHHHHHHHHhCCCCceEEEEEC-CC-ccccc--------eeCHHHHHHHHHHHHhhchhh
Confidence 45787775 8854444444333333444332 6666666552 22 11111 123335555566666654433
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCC--ceeEEEEc
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVAA 626 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~ 626 (758)
++-+-++|+|.||.++=+++.++|+ ..+-.|..
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISl 127 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISL 127 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEe
Confidence 3569999999999999999998886 25555543
No 441
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=83.31 E-value=8.3 Score=46.02 Aligned_cols=199 Identities=10% Similarity=0.032 Sum_probs=104.2
Q ss_pred EEeeEEECCCCCE----EEEEEeCCCCeEEEEEEEECCC---Cceee-c----cccCcceeEEEecCC-eEEEEEeCCCC
Q 004368 192 SVGCFQVSPDNKL----VAYAEDTKGDEIYTVYVIDIET---GTPVG-K----PLVGVTASVEWAGNE-ALVYITMDEIL 258 (758)
Q Consensus 192 ~i~~~~~SPDG~~----lAy~~~~~G~e~~~l~v~dl~~---g~~~~-~----~~~~~~~~~~wspDg-~l~y~~~~~~~ 258 (758)
......|++-|.. || +|.|...|-++|.+. +.... + .-.+.+.++.|.+.. -++-...++
T Consensus 66 rF~kL~W~~~g~~~~GlIa-----GG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~-- 138 (1049)
T KOG0307|consen 66 RFNKLAWGSYGSHSHGLIA-----GGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADD-- 138 (1049)
T ss_pred cceeeeecccCCCccceee-----ccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCC--
Confidence 4456689888887 55 555666788888764 22211 1 113335558899987 354444333
Q ss_pred CCceEEEEEcCCCCCCcEEEeeec-CCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce---ee
Q 004368 259 RPDKAWLHKLEADQSNDICLYHEK-DDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV---DT 334 (758)
Q Consensus 259 ~~~~v~~~~l~~~~~~~~~v~~~~-~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~---~~ 334 (758)
.+++++++...+. ...+... .+.....++|...-.+|+.+.+..+.. .++|+...+....+....... ..
T Consensus 139 --geI~iWDlnn~~t--P~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~--~iWDlr~~~pii~ls~~~~~~~~S~l 212 (1049)
T KOG0307|consen 139 --GEILIWDLNKPET--PFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRA--VIWDLRKKKPIIKLSDTPGRMHCSVL 212 (1049)
T ss_pred --CcEEEeccCCcCC--CCCCCCCCCcccceEeccchhhhHHhhccCCCCCc--eeccccCCCcccccccCCCccceeee
Confidence 2589999875421 1111111 112223466776666666555544444 445665544233333222212 23
Q ss_pred EEeecCC-EEEEEEcCCCCCCcEEEEEeCCCCCccee-eecCCCCceeeeEEEe--CCEEEEEEEeCCeeEEEEEEcCC
Q 004368 335 AASHRGN-HFFITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLF--IDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 335 ~~s~dg~-~l~~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
.|.|++. .++..++++..+. |-..|+........ +..+.. -+..++|. +.++++..-.++. +..|+..+
T Consensus 213 ~WhP~~aTql~~As~dd~~Pv--iqlWDlR~assP~k~~~~H~~--GilslsWc~~D~~lllSsgkD~~--ii~wN~~t 285 (1049)
T KOG0307|consen 213 AWHPDHATQLLVASGDDSAPV--IQLWDLRFASSPLKILEGHQR--GILSLSWCPQDPRLLLSSGKDNR--IICWNPNT 285 (1049)
T ss_pred eeCCCCceeeeeecCCCCCce--eEeecccccCCchhhhccccc--ceeeeccCCCCchhhhcccCCCC--eeEecCCC
Confidence 4888875 4566666654444 34445443222222 323333 34466665 4478878777765 55666553
No 442
>KOG4328 consensus WD40 protein [Function unknown]
Probab=83.18 E-value=74 Score=34.52 Aligned_cols=140 Identities=13% Similarity=0.124 Sum_probs=81.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cc--cC-cceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PL--VG-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~--~~-~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
.++.+.+||...--.|+.+.+| +|+..|++++..... .. .. .++++.++.+. .++|... -+ ...++-+
T Consensus 236 ~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~-~G--~f~~iD~ 308 (498)
T KOG4328|consen 236 PVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDN-VG--NFNVIDL 308 (498)
T ss_pred cccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeec-cc--ceEEEEe
Confidence 4788899998887788888777 699999988754332 22 22 25667787777 5555432 11 3445555
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC-ce-EEeeccccce-eeEEeecCCE
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE-EL-RVLTPRVVGV-DTAASHRGNH 342 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~-~~-~~l~~~~~~~-~~~~s~dg~~ 342 (758)
+.+...-+...+... -..++++.|-..+++.+++...+-.||-+.--.++ .+ .-..+....+ ..+|||.|..
T Consensus 309 R~~~s~~~~~~lh~k----KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt 383 (498)
T KOG4328|consen 309 RTDGSEYENLRLHKK----KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT 383 (498)
T ss_pred ecCCccchhhhhhhc----ccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc
Confidence 554332222222211 22367788988888887777666666643221222 11 1112222223 3359999998
No 443
>PLN02606 palmitoyl-protein thioesterase
Probab=82.97 E-value=10 Score=39.29 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=56.7
Q ss_pred CCCCEEEEecCCCccCCCCCCChHHHHHHH-cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCC
Q 004368 514 GSDPLLLYGYGSYEICNDPAFNSSRLSLLD-RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYC 592 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 592 (758)
.+.|+|| .||-......+++......+.+ .|.-+..+.. |.+ .-..| -.+..+.+..+.+.|.+....
T Consensus 25 ~~~PvVi-wHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~~-~~~s~--------~~~~~~Qv~~vce~l~~~~~L 93 (306)
T PLN02606 25 LSVPFVL-FHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GNG-VQDSL--------FMPLRQQASIACEKIKQMKEL 93 (306)
T ss_pred CCCCEEE-ECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CCC-ccccc--------ccCHHHHHHHHHHHHhcchhh
Confidence 4577666 5995444444445444444432 3665555542 221 10011 122335555566666664433
Q ss_pred CCCcEEEEEeChhHHHHHHHHhhCCC--ceeEEEE
Q 004368 593 TKEKLCIEGRSAGGLLIGAVLNMRPD--LFKAAVA 625 (758)
Q Consensus 593 d~~~i~i~G~S~GG~l~~~~~~~~p~--~f~a~v~ 625 (758)
++-+-++|+|.||.+.=+++.++|+ -.+-.|.
T Consensus 94 -~~G~naIGfSQGglflRa~ierc~~~p~V~nlIS 127 (306)
T PLN02606 94 -SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVS 127 (306)
T ss_pred -cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEE
Confidence 3569999999999999999998876 2444443
No 444
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=82.69 E-value=29 Score=34.22 Aligned_cols=118 Identities=14% Similarity=0.144 Sum_probs=60.9
Q ss_pred EeeEEECCCCCEEEEEEeCCCCe----EEEEEEEECCCCceeec-cccCcceeEEEecCC-eEEEEEeCCCCCCceE--E
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDE----IYTVYVIDIETGTPVGK-PLVGVTASVEWAGNE-ALVYITMDEILRPDKA--W 264 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e----~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg-~l~y~~~~~~~~~~~v--~ 264 (758)
+..-.++|||++.+=+....|.+ ...||.+-+ ++++... .--++..+++|+-|- .+||+-. .++.| |
T Consensus 111 ~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDs----ln~~V~a~ 185 (310)
T KOG4499|consen 111 LNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-GHQVELIWNCVGISNGLAWDSDAKKFYYIDS----LNYEVDAY 185 (310)
T ss_pred cccCccCCCCceeeeeeccccccccccccEEEEecc-CCCceeeehhccCCccccccccCcEEEEEcc----CceEEeee
Confidence 44558899999966555554432 135666544 3443321 112345679999887 6666632 23455 5
Q ss_pred EEEcCCCCC-CcEEEeeecC-CceeeEEEEcCCCcE------EEEEecCCcceEEEEEeCCCCC
Q 004368 265 LHKLEADQS-NDICLYHEKD-DIYSLGLQASESKKF------LFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 265 ~~~l~~~~~-~~~~v~~~~~-~~~~~~~~~S~Dg~~------l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
-++..++.. ....+|.-.. ..+. +.-|||-. |++..- ....|+.+|+.+++
T Consensus 186 dyd~~tG~~snr~~i~dlrk~~~~e---~~~PDGm~ID~eG~L~Va~~--ng~~V~~~dp~tGK 244 (310)
T KOG4499|consen 186 DYDCPTGDLSNRKVIFDLRKSQPFE---SLEPDGMTIDTEGNLYVATF--NGGTVQKVDPTTGK 244 (310)
T ss_pred ecCCCcccccCcceeEEeccCCCcC---CCCCCcceEccCCcEEEEEe--cCcEEEEECCCCCc
Confidence 555666542 2233443211 1110 11233322 333322 34568899998887
No 445
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=82.03 E-value=3.5 Score=45.24 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=64.0
Q ss_pred CCCCEEEEecCCCccCCCCCC-------------Ch----HHHHHHHcCcEEEEEecCCCCCCchhHHhcccccCCcChH
Q 004368 514 GSDPLLLYGYGSYEICNDPAF-------------NS----SRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFLKKKNTF 576 (758)
Q Consensus 514 ~~~P~vl~~hGg~~~~~~~~~-------------~~----~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~ 576 (758)
.+.|++++.-||||.+....+ .+ .--.|.+++= ++.+|.+-+.||...-..+ +.......-
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ad-LvFiDqPvGTGfS~a~~~e-~~~d~~~~~ 176 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFAD-LVFIDQPVGTGFSRALGDE-KKKDFEGAG 176 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCc-eEEEecCcccCcccccccc-cccchhccc
Confidence 568999999999987643321 11 1235666543 5567766666665541111 111111222
Q ss_pred hHHHHHHHH----HHHcCCCCCCcEEEEEeChhHHHH----HHHHhh--CCC---ceeEEEEcCC-ccchh
Q 004368 577 TDFIACAEY----LIKNCYCTKEKLCIEGRSAGGLLI----GAVLNM--RPD---LFKAAVAAVP-FVDVL 633 (758)
Q Consensus 577 ~D~~~~~~~----l~~~~~~d~~~i~i~G~S~GG~l~----~~~~~~--~p~---~f~a~v~~~~-~~d~~ 633 (758)
+|+....+. +.+..- .-.+..|+|.||||+-+ ..+..+ .++ ++..+...++ .+|.+
T Consensus 177 ~D~~~~~~~f~~~fp~~~r-~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~t~Pl 246 (498)
T COG2939 177 KDVYSFLRLFFDKFPHYAR-LLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLWTDPL 246 (498)
T ss_pred hhHHHHHHHHHHHHHHHhh-hcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcccChh
Confidence 455554443 333321 12589999999999944 333343 122 3566666666 55543
No 446
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=81.73 E-value=3.8 Score=39.06 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhCC
Q 004368 578 DFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMRP 617 (758)
Q Consensus 578 D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p 617 (758)
++.+.++-|.... ....++.++|||||..+++.++.+.+
T Consensus 93 ~L~~f~~gl~a~~-~~~~~~tv~GHSYGS~v~G~A~~~~~ 131 (177)
T PF06259_consen 93 RLARFLDGLRATH-GPDAHLTVVGHSYGSTVVGLAAQQGG 131 (177)
T ss_pred HHHHHHHHhhhhc-CCCCCEEEEEecchhHHHHHHhhhCC
Confidence 3333444443333 45679999999999999999988733
No 447
>PRK13615 lipoprotein LpqB; Provisional
Probab=81.28 E-value=1.1e+02 Score=35.15 Aligned_cols=157 Identities=9% Similarity=-0.103 Sum_probs=83.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccC-cceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVG-VTASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~-~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
..++.+|+||+.+|+... . ..+++....+ .... ...+ ....+.|.++|.++ +..+.. +..+.... +++
T Consensus 336 ~~s~avS~dg~~~A~v~~-~----~~l~vg~~~~-~~~~-~~~~~~Lt~PS~d~~g~vW-tv~~g~--~~~l~~~~-~~G 404 (557)
T PRK13615 336 ADAATLSADGRQAAVRNA-S----GVWSVGDGDR-DAVL-LDTRPGLVAPSLDAQGYVW-STPASD--PRGLVAWG-PDG 404 (557)
T ss_pred cccceEcCCCceEEEEcC-C----ceEEEecCCC-ccee-eccCCccccCcCcCCCCEE-EEeCCC--ceEEEEec-CCC
Confidence 367899999999999943 1 2677776552 2222 1222 24568898888444 433332 22233322 122
Q ss_pred CCCcEEE-eeecCCceeeEEEEcCCCcEEEEEecCCcceEEEE--EeCCCCCceEEe-ec-c-----ccc-eeeEEeecC
Q 004368 272 QSNDICL-YHEKDDIYSLGLQASESKKFLFIASESKITRFVFY--LDVSKPEELRVL-TP-R-----VVG-VDTAASHRG 340 (758)
Q Consensus 272 ~~~~~~v-~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~--~d~~~~~~~~~l-~~-~-----~~~-~~~~~s~dg 340 (758)
+...+ .+-....-...+..|+||-.+++.....+..+|++ +--.++. ++.| +. . ... ....|..++
T Consensus 405 --~~~~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~-P~~L~~~p~~l~~~l~~v~sl~W~~~~ 481 (557)
T PRK13615 405 --VGHPVAVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGV-PTSLTTTPLELLASPGTPLDATWVDEL 481 (557)
T ss_pred --ceEEeeccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCc-ceEeeeccEEcccCcCcceeeEEcCCC
Confidence 11111 11111223446789999999988776555555665 2223332 3333 21 1 111 123376655
Q ss_pred CEEEEEEcCCCCCCcEEEEEeCCCC
Q 004368 341 NHFFITRRSDELFNSELLACPVDNT 365 (758)
Q Consensus 341 ~~l~~~s~~~~~~~~~L~~~~~~~~ 365 (758)
. |++++... ..+..++.+.+.++
T Consensus 482 ~-laVl~~~~-~~~~~v~~v~v~g~ 504 (557)
T PRK13615 482 D-VATLTLAP-DGERQVELHQVGGP 504 (557)
T ss_pred E-EEEEeccC-CCCceEEEEECCCc
Confidence 4 77776443 24566888888764
No 448
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=81.18 E-value=14 Score=38.26 Aligned_cols=176 Identities=16% Similarity=0.186 Sum_probs=84.3
Q ss_pred CCCeEEEEEEEECCCCceeeccccCc--ceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeeecCCceeeE
Q 004368 212 KGDEIYTVYVIDIETGTPVGKPLVGV--TASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHEKDDIYSLG 289 (758)
Q Consensus 212 ~G~e~~~l~v~dl~~g~~~~~~~~~~--~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~ 289 (758)
.|+...+|.|||+.+|+.+..-+..+ .-.+.|+. |.++-.+. ++...||...-.++.. -..++-+.... +.
T Consensus 252 sGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~n-g~mvtcSk---DrsiaVWdm~sps~it-~rrVLvGHrAa--VN 324 (499)
T KOG0281|consen 252 SGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN-GYMVTCSK---DRSIAVWDMASPTDIT-LRRVLVGHRAA--VN 324 (499)
T ss_pred ecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeC-CEEEEecC---CceeEEEeccCchHHH-HHHHHhhhhhh--ee
Confidence 46667899999999999886434333 33466743 33332222 2334455443222110 00111121111 11
Q ss_pred EEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcce
Q 004368 290 LQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT 369 (758)
Q Consensus 290 ~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~ 369 (758)
+ ..-|.|+|+-.+++ .+ |-+++..+.+-.+.+.....|+... .-.++|++....+ ..|-..|++. +.--
T Consensus 325 v-Vdfd~kyIVsASgD-RT--ikvW~~st~efvRtl~gHkRGIACl--QYr~rlvVSGSSD----ntIRlwdi~~-G~cL 393 (499)
T KOG0281|consen 325 V-VDFDDKYIVSASGD-RT--IKVWSTSTCEFVRTLNGHKRGIACL--QYRDRLVVSGSSD----NTIRLWDIEC-GACL 393 (499)
T ss_pred e-eccccceEEEecCC-ce--EEEEeccceeeehhhhcccccceeh--hccCeEEEecCCC----ceEEEEeccc-cHHH
Confidence 1 23366766543333 23 4455666665234455555555432 1133455443333 2355556654 2222
Q ss_pred eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCC
Q 004368 370 VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 370 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~ 409 (758)
.+....++ .+.-+.++.++++ ...-+|. +.||++..
T Consensus 394 RvLeGHEe-LvRciRFd~krIV-SGaYDGk--ikvWdl~a 429 (499)
T KOG0281|consen 394 RVLEGHEE-LVRCIRFDNKRIV-SGAYDGK--IKVWDLQA 429 (499)
T ss_pred HHHhchHH-hhhheeecCceee-eccccce--EEEEeccc
Confidence 23322222 3455666666665 4445665 67888874
No 449
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=80.83 E-value=1.6 Score=49.96 Aligned_cols=46 Identities=15% Similarity=0.294 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHcC----CCC---CCcEEEEEeChhHHHHHHHHhhCCCceeEE
Q 004368 577 TDFIACAEYLIKNC----YCT---KEKLCIEGRSAGGLLIGAVLNMRPDLFKAA 623 (758)
Q Consensus 577 ~D~~~~~~~l~~~~----~~d---~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~ 623 (758)
+=+.+||.++.+.. --+ |.-|+++||||||.++-++++. |...+..
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tl-kn~~~~s 209 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTL-KNEVQGS 209 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhh-hhhccch
Confidence 33566777765531 122 6779999999999998888875 5444443
No 450
>PLN02454 triacylglycerol lipase
Probab=80.08 E-value=2.8 Score=45.36 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=29.8
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
..+++.+.++.|+++.--..-.|.++|||+||.||..++.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 3467888888888764322235999999999999877764
No 451
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=79.47 E-value=17 Score=35.96 Aligned_cols=123 Identities=14% Similarity=0.059 Sum_probs=65.8
Q ss_pred EEeeEEECCC---C-----------CEEEEEEeCCCCeEEEEEEEECCCCceeec-cccC---cceeEEEecCC--eEEE
Q 004368 192 SVGCFQVSPD---N-----------KLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVG---VTASVEWAGNE--ALVY 251 (758)
Q Consensus 192 ~i~~~~~SPD---G-----------~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~---~~~~~~wspDg--~l~y 251 (758)
.+.++.|.|- | ++|+ .|+-.+.+.||+.+.++.... ++.+ -...++|.|.- ...+
T Consensus 151 GvnsVswapa~~~g~~~~~~~~~~~krlv-----SgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~ 225 (299)
T KOG1332|consen 151 GVNSVSWAPASAPGSLVDQGPAAKVKRLV-----SGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKST 225 (299)
T ss_pred ccceeeecCcCCCccccccCcccccceee-----ccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCcee
Confidence 4667788876 6 3333 244467899999988765433 3433 25668999974 3333
Q ss_pred EEeCCCCCCceEEEEEcCCCCC-CcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe
Q 004368 252 ITMDEILRPDKAWLHKLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (758)
Q Consensus 252 ~~~~~~~~~~~v~~~~l~~~~~-~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l 325 (758)
...-..++ .|+++..+...+ -...++++ -+.....++||..|..|.++..+ +.-.||.=++++ + +.++
T Consensus 226 iAS~SqDg--~viIwt~~~e~e~wk~tll~~-f~~~~w~vSWS~sGn~LaVs~Gd-Nkvtlwke~~~G-k-w~~v 294 (299)
T KOG1332|consen 226 IASCSQDG--TVIIWTKDEEYEPWKKTLLEE-FPDVVWRVSWSLSGNILAVSGGD-NKVTLWKENVDG-K-WEEV 294 (299)
T ss_pred eEEecCCC--cEEEEEecCccCccccccccc-CCcceEEEEEeccccEEEEecCC-cEEEEEEeCCCC-c-EEEc
Confidence 33222222 244444432211 12223333 22233468899999988875432 334455555543 2 5544
No 452
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=79.44 E-value=3.6 Score=40.14 Aligned_cols=58 Identities=21% Similarity=0.356 Sum_probs=42.0
Q ss_pred cChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhhC----C---CceeEEEEcCCccc
Q 004368 573 KNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNMR----P---DLFKAAVAAVPFVD 631 (758)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~----p---~~f~a~v~~~~~~d 631 (758)
...+.|+.+|.++-.++.- +-..+.|.|||.|+.+...++..+ | .+++|-+...++..
T Consensus 74 ~~ay~DV~~AF~~yL~~~n-~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYN-NGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYPVTV 138 (207)
T ss_pred HhhHHHHHHHHHHHHHhcC-CCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCccccH
Confidence 3568999999987665532 236899999999999999998864 2 24566666666543
No 453
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=78.20 E-value=87 Score=32.21 Aligned_cols=127 Identities=13% Similarity=0.082 Sum_probs=68.1
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~ 367 (758)
.+++||.-..++..++-.++-++|-+.-.+....+.......-+ ...|+.||..++....+ ..+-.+|+.+ ++
T Consensus 32 ~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~D-----k~~k~wDL~S-~Q 105 (347)
T KOG0647|consen 32 ALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCD-----KQAKLWDLAS-GQ 105 (347)
T ss_pred eeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccC-----CceEEEEccC-CC
Confidence 57899965666555555566777877654221122222222222 33499999776655443 3456678876 33
Q ss_pred ceeeecCCCCceeeeEEEeCCEE---EEEEEeCCeeEEEEEEcCCCCCccccccCCceeeccCccccc
Q 004368 368 TTVLIPHRESVKLQDIQLFIDHL---AVYEREGGLQKITTYRLPAVGEPLKSLQGGKSVEFIDPVYSI 432 (758)
Q Consensus 368 ~~~l~~~~~~~~~~~~~~~~~~l---~~~~~~~g~~~l~v~~l~~~g~~~~~l~~~~~i~~p~~~~~i 432 (758)
...+-.++. .+....|.+... +++.+-+- .|..|+.... .+ ...+.+|+..|..
T Consensus 106 ~~~v~~Hd~--pvkt~~wv~~~~~~cl~TGSWDK--TlKfWD~R~~-~p------v~t~~LPeRvYa~ 162 (347)
T KOG0647|consen 106 VSQVAAHDA--PVKTCHWVPGMNYQCLVTGSWDK--TLKFWDTRSS-NP------VATLQLPERVYAA 162 (347)
T ss_pred eeeeeeccc--ceeEEEEecCCCcceeEeccccc--ceeecccCCC-Ce------eeeeeccceeeeh
Confidence 333444443 456677766533 33333332 3667776532 11 2457788876653
No 454
>PLN02408 phospholipase A1
Probab=77.78 E-value=3.4 Score=44.08 Aligned_cols=39 Identities=18% Similarity=0.036 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
+.+.+.++.|+++..-.+.+|.|.|||.||.||..++..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 456677777776543234579999999999998776654
No 455
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=77.66 E-value=80 Score=35.12 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=54.8
Q ss_pred eeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEE----EeeecCCceeeEEEEcCCC------cEEEEEecC--C
Q 004368 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDIC----LYHEKDDIYSLGLQASESK------KFLFIASES--K 306 (758)
Q Consensus 239 ~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~----v~~~~~~~~~~~~~~S~Dg------~~l~~~s~~--~ 306 (758)
.+++|.|||+++++.... -+|++.+-++....... +.......-.++++++||- ++|+++... .
T Consensus 33 w~maflPDG~llVtER~~----G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 33 WALLWGPDNQLWVTERAT----GKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred eEEEEcCCCeEEEEEecC----CEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence 458999999887776432 24777665443211111 1111112234578888774 466665322 1
Q ss_pred -----cceEEEEEeCCCC--C--ceEEeeccc------cceeeEEeecCCEEEEEEcCC
Q 004368 307 -----ITRFVFYLDVSKP--E--ELRVLTPRV------VGVDTAASHRGNHFFITRRSD 350 (758)
Q Consensus 307 -----~~~~l~~~d~~~~--~--~~~~l~~~~------~~~~~~~s~dg~~l~~~s~~~ 350 (758)
....|.++.++.. . ..+.+.... .+....|.|||. ||+.+.+.
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD~ 166 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGEQ 166 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCc-EEEEECCC
Confidence 2456777766421 1 123332211 122334889885 88876654
No 456
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=77.49 E-value=4.1 Score=40.77 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
.++...++.+.++. ...+|.+.|||+||.++..++..
T Consensus 112 ~~~~~~~~~~~~~~--p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 112 NQVLPELKSALKQY--PDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHhhC--CCceEEEEccCHHHHHHHHHHHH
Confidence 44555555555442 34789999999999988766654
No 457
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=76.47 E-value=97 Score=31.88 Aligned_cols=106 Identities=19% Similarity=0.269 Sum_probs=64.5
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeec-cccceeeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCc
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTP-RVVGVDTAASHRGNHFFITRRSDELFNSELLACPVDNTSE 367 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~-~~~~~~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~ 367 (758)
++.++.+ ++++.. ..+-|.++|..+++.++.+.. ...+..|-|+-.|++.|+..-.+ .+..+|+.++..
T Consensus 91 Dv~vse~--yvyvad---~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadldd-----gfLivdvsdpss 160 (370)
T COG5276 91 DVRVSEE--YVYVAD---WSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDD-----GFLIVDVSDPSS 160 (370)
T ss_pred eeEeccc--EEEEEc---CCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccC-----cEEEEECCCCCC
Confidence 4555544 555543 334578899988774444432 23356666888899887765443 367788887644
Q ss_pred ceeeecC--CCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcC
Q 004368 368 TTVLIPH--RESVKLQDIQLFIDHLAVYEREGGLQKITTYRLP 408 (758)
Q Consensus 368 ~~~l~~~--~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~ 408 (758)
... ... .....-.++.+.+++-++..+.+|. .+.++.
T Consensus 161 P~l-agrya~~~~d~~~v~ISGn~AYvA~~d~GL---~ivDVS 199 (370)
T COG5276 161 PQL-AGRYALPGGDTHDVAISGNYAYVAWRDGGL---TIVDVS 199 (370)
T ss_pred cee-eeeeccCCCCceeEEEecCeEEEEEeCCCe---EEEEcc
Confidence 332 111 1112225778899999999888884 455554
No 458
>PLN02571 triacylglycerol lipase
Probab=75.67 E-value=4.1 Score=44.11 Aligned_cols=40 Identities=15% Similarity=0.085 Sum_probs=28.7
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
..+++.+.++.|+++.--..-+|.+.|||+||.||..++.
T Consensus 206 ar~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~ 245 (413)
T PLN02571 206 ARDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHH
Confidence 3467778888777653211237999999999999876665
No 459
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=75.12 E-value=46 Score=37.27 Aligned_cols=113 Identities=12% Similarity=0.199 Sum_probs=70.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccc---cCcceeEEEecCC-eEEEEEeCCCCCCceEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWLHK 267 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~---~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~ 267 (758)
.+..+.|.-+|.|||-+...+|+ ..+.|.+|.-+..+ .++ .+..-.+.|.|-. .+| ++... .|.+++
T Consensus 523 ~i~~vtWHrkGDYlatV~~~~~~--~~VliHQLSK~~sQ-~PF~kskG~vq~v~FHPs~p~lf-VaTq~-----~vRiYd 593 (733)
T KOG0650|consen 523 SIRQVTWHRKGDYLATVMPDSGN--KSVLIHQLSKRKSQ-SPFRKSKGLVQRVKFHPSKPYLF-VATQR-----SVRIYD 593 (733)
T ss_pred ccceeeeecCCceEEEeccCCCc--ceEEEEeccccccc-CchhhcCCceeEEEecCCCceEE-EEecc-----ceEEEe
Confidence 56778899999999998887774 67888888655443 233 3445557898887 554 44322 366777
Q ss_pred cCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCC
Q 004368 268 LEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKP 319 (758)
Q Consensus 268 l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~ 319 (758)
+-....-.. +. ....+..+++.+|.|.-|++.+... .+..+|++-.
T Consensus 594 L~kqelvKk-L~--tg~kwiS~msihp~GDnli~gs~d~---k~~WfDldls 639 (733)
T KOG0650|consen 594 LSKQELVKK-LL--TGSKWISSMSIHPNGDNLILGSYDK---KMCWFDLDLS 639 (733)
T ss_pred hhHHHHHHH-Hh--cCCeeeeeeeecCCCCeEEEecCCC---eeEEEEcccC
Confidence 754311111 11 1234455678899999988866542 3455566543
No 460
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=75.00 E-value=3.9 Score=46.04 Aligned_cols=75 Identities=12% Similarity=0.133 Sum_probs=50.2
Q ss_pred CChHHHHHHHcCcEEEEEecCCCCCCchhHHhccccc-CCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHH
Q 004368 534 FNSSRLSLLDRGFIFAIAQIRGGGELGRQWYENGKFL-KKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAV 612 (758)
Q Consensus 534 ~~~~~~~l~~~G~~v~~~~~RG~g~~G~~~~~~~~~~-~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~ 612 (758)
|...+..|++.||. --|++|. ..+|..+.... ....-|..+...|+.+.+.. .-++|.|+||||||.++...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gA---PYDWRls~~~le~rd~YF~rLK~lIE~ay~~n--ggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMA---AYDWRLSFQNTEVRDQTLSRLKSNIELMVATN--GGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeec---ccccccCccchhhhhHHHHHHHHHHHHHHHHc--CCCeEEEEEeCCchHHHHHH
Confidence 45677889999997 4566643 35676543222 22334566677777665532 13799999999999999987
Q ss_pred Hhh
Q 004368 613 LNM 615 (758)
Q Consensus 613 ~~~ 615 (758)
+..
T Consensus 231 L~w 233 (642)
T PLN02517 231 MKW 233 (642)
T ss_pred HHh
Confidence 764
No 461
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=74.84 E-value=1.1e+02 Score=34.71 Aligned_cols=187 Identities=14% Similarity=0.160 Sum_probs=96.5
Q ss_pred EECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-c-ccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCC
Q 004368 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-P-LVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSN 274 (758)
Q Consensus 197 ~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~-~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~ 274 (758)
.+-+--++|+- |++..+|+|++..|++.+.. . -++....++-.|--=++.++.|+- .+.+++-...-.
T Consensus 62 kfiaRknWiv~-----GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm----~iKlW~we~~wa- 131 (794)
T KOG0276|consen 62 KFIARKNWIVT-----GSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDM----TIKLWDWENEWA- 131 (794)
T ss_pred eeeeccceEEE-----ecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCcc----EEEEeeccCcee-
Confidence 34444445543 55678999999999886652 1 122345566667652223443331 233333333322
Q ss_pred cEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE-EeecCCEEEEEEcCCCCC
Q 004368 275 DICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA-ASHRGNHFFITRRSDELF 353 (758)
Q Consensus 275 ~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~ 353 (758)
-..+|++ ...+.+.+.+.|...--+.++.-..+-.||-+- .+.+-..|..+..|+.+. +-+.|+.-|+++..++
T Consensus 132 ~~qtfeG-H~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslg--s~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD-- 206 (794)
T KOG0276|consen 132 CEQTFEG-HEHYVMQVAFNPKDPNTFASASLDRTVKVWSLG--SPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD-- 206 (794)
T ss_pred eeeEEcC-cceEEEEEEecCCCccceeeeeccccEEEEEcC--CCCCceeeeccccCcceEEeccCCCcceEEecCCC--
Confidence 3345654 456788888888554434444444556666553 332233455566666554 5577888888887662
Q ss_pred CcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCC-EEEEEEEeCCeeE
Q 004368 354 NSELLACPVDNTSETTVLIPHRESVKLQDIQLFID-HLAVYEREGGLQK 401 (758)
Q Consensus 354 ~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~ 401 (758)
.-+-++|-.+..-.+.+-.+..+ +..+.+... -++++..++|.-+
T Consensus 207 -~tiKvWDyQtk~CV~TLeGHt~N--vs~v~fhp~lpiiisgsEDGTvr 252 (794)
T KOG0276|consen 207 -LTIKVWDYQTKSCVQTLEGHTNN--VSFVFFHPELPIIISGSEDGTVR 252 (794)
T ss_pred -ceEEEeecchHHHHHHhhccccc--ceEEEecCCCcEEEEecCCccEE
Confidence 33445565431111112222222 222333332 3555666776543
No 462
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=74.10 E-value=7.9 Score=41.26 Aligned_cols=76 Identities=16% Similarity=0.173 Sum_probs=52.5
Q ss_pred HHHHHHHcCcEEEEEec-CCCCCCchhHHhcccccCCcChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh
Q 004368 537 SRLSLLDRGFIFAIAQI-RGGGELGRQWYENGKFLKKKNTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM 615 (758)
Q Consensus 537 ~~~~l~~~G~~v~~~~~-RG~g~~G~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 615 (758)
....|.++|+-|+-+|- | .=|.+ ..-...-.|+...+++...+.. ..++.++|.|+|.=+.-++-++
T Consensus 279 v~~~l~~~gvpVvGvdsLR------YfW~~----rtPe~~a~Dl~r~i~~y~~~w~--~~~~~liGySfGADvlP~~~n~ 346 (456)
T COG3946 279 VAEALQKQGVPVVGVDSLR------YFWSE----RTPEQIAADLSRLIRFYARRWG--AKRVLLIGYSFGADVLPFAYNR 346 (456)
T ss_pred HHHHHHHCCCceeeeehhh------hhhcc----CCHHHHHHHHHHHHHHHHHhhC--cceEEEEeecccchhhHHHHHh
Confidence 34678889999999983 2 11211 1112345788888888777643 5899999999999998888888
Q ss_pred CCCceeEEE
Q 004368 616 RPDLFKAAV 624 (758)
Q Consensus 616 ~p~~f~a~v 624 (758)
-|..-+..|
T Consensus 347 L~~~~r~~v 355 (456)
T COG3946 347 LPPATRQRV 355 (456)
T ss_pred CCHHHHHHH
Confidence 776444333
No 463
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=73.85 E-value=1.3e+02 Score=32.86 Aligned_cols=177 Identities=16% Similarity=0.160 Sum_probs=83.8
Q ss_pred EEEEEEEECCCCceeeccccCcceeEEEecCC-e-EE--EEEeCCCCCCceEEEEEcCCCCCCc-EEEeeecCCceeeEE
Q 004368 216 IYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-A-LV--YITMDEILRPDKAWLHKLEADQSND-ICLYHEKDDIYSLGL 290 (758)
Q Consensus 216 ~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~-l~--y~~~~~~~~~~~v~~~~l~~~~~~~-~~v~~~~~~~~~~~~ 290 (758)
..++.++|+.||...- +..+..- .-+-+ . +- |+......++ .|..+.+....... ..+. |.....+
T Consensus 17 ~~~~~~~dl~TGt~~~-~ykg~~~---a~~~sl~~l~~~yllsaq~~rp-~l~vw~i~k~~~~~q~~v~----Pg~v~al 87 (476)
T KOG0646|consen 17 PINCIVWDLRTGTSLL-QYKGSYL---AQAASLTALNNEYLLSAQLKRP-LLHVWEILKKDQVVQYIVL----PGPVHAL 87 (476)
T ss_pred CcceeEEecCCCceeE-EecCccc---ccchhhhhhchhheeeecccCc-cccccccCchhhhhhhccc----ccceeee
Confidence 4578899999997654 3333211 11112 1 11 2222122233 36666665432110 1111 2223346
Q ss_pred EEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee-EEeecCCEEEEEEcCCCCCCcEEEE-EeCCCCCc-
Q 004368 291 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT-AASHRGNHFFITRRSDELFNSELLA-CPVDNTSE- 367 (758)
Q Consensus 291 ~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~-~~~~~~~~- 367 (758)
.-+|+|.||+... -...||++.+.+|.-+..+..+-..+.. .|+.||.+|+-.++++ + ..+|. +++-....
T Consensus 88 ~s~n~G~~l~ag~---i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg-~--V~vW~l~~lv~a~~~ 161 (476)
T KOG0646|consen 88 ASSNLGYFLLAGT---ISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDG-A--VLVWLLTDLVSADND 161 (476)
T ss_pred ecCCCceEEEeec---ccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCc-c--EEEEEEEeecccccC
Confidence 6789999987542 2346899999988722222233333333 3788888665444433 2 22332 22211111
Q ss_pred --cee-eecCCCCceeeeEEEeCC---EEEEEEEeCCeeEEEEEEcCC
Q 004368 368 --TTV-LIPHRESVKLQDIQLFID---HLAVYEREGGLQKITTYRLPA 409 (758)
Q Consensus 368 --~~~-l~~~~~~~~~~~~~~~~~---~l~~~~~~~g~~~l~v~~l~~ 409 (758)
... -.-.+....+.++..... ..++++..|.. +++|++..
T Consensus 162 ~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t--~k~wdlS~ 207 (476)
T KOG0646|consen 162 HSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRT--IKLWDLSL 207 (476)
T ss_pred CCccceeeeccCcceeEEEEecCCCccceEEEecCCce--EEEEEecc
Confidence 111 111233445666665432 34445555543 66777773
No 464
>PRK13613 lipoprotein LpqB; Provisional
Probab=73.80 E-value=98 Score=35.85 Aligned_cols=124 Identities=10% Similarity=0.086 Sum_probs=70.6
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec---cccC-cceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK---PLVG-VTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~---~~~~-~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
.+..|+|.++| -+|+.+.+......+++..- +|+.... -+.+ .+..+.-|+|| +++.+...... .+|+..
T Consensus 410 ~Lt~PS~d~~g--~vWtvd~~~~~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~--~~v~va 484 (599)
T PRK13613 410 RLTSPSWDGRG--DLWVVDRDPADPRLLWLLQG-DGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGR--RSLQIG 484 (599)
T ss_pred cccCCcCcCCC--CEEEecCCCCCceEEEEEcC-CCcEEEeeccccCCCEeEEEEECCCccEEEEEEecCCC--cEEEEE
Confidence 47788999998 35666543222233666653 5555432 2233 36678999999 88887654322 246654
Q ss_pred EcCCCCCCcEEEeee----cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 267 KLEADQSNDICLYHE----KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~----~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
.+-.+......+-.- ..-.-..+++|..++..+++.....+...+|++.+++..
T Consensus 485 ~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~~ 542 (599)
T PRK13613 485 RIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGST 542 (599)
T ss_pred EEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEEEEEeccCCCCcceEEEecCCcC
Confidence 443222222222110 011113478899998865555444456779999998764
No 465
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=73.21 E-value=1.1e+02 Score=31.18 Aligned_cols=111 Identities=12% Similarity=0.122 Sum_probs=59.4
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCCc-eEEe-eccccce--e---eEEee--cCCEEEEEEcCCCCCCcEEEE
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEE-LRVL-TPRVVGV--D---TAASH--RGNHFFITRRSDELFNSELLA 359 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~-~~~l-~~~~~~~--~---~~~s~--dg~~l~~~s~~~~~~~~~L~~ 359 (758)
.+.|-|++..|+-.. .++|.+++++.+.. ...+ .+...+. . ..|+| ||..+..... ..|..
T Consensus 128 cvew~Pns~klasm~----dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d------~tl~~ 197 (370)
T KOG1007|consen 128 CVEWEPNSDKLASMD----DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD------STLQF 197 (370)
T ss_pred eEEEcCCCCeeEEec----cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC------CcEEE
Confidence 467999999887543 45677788776541 1222 2221111 1 12776 5665554432 23666
Q ss_pred EeCCCCCcceeeecCCCCceeeeEEEeC--CEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 360 CPVDNTSETTVLIPHRESVKLQDIQLFI--DHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 360 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
+|+.+ ....+-+.......+.+++... .+++++.-++|. +++|+......
T Consensus 198 ~D~RT-~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgy--vriWD~R~tk~ 249 (370)
T KOG1007|consen 198 WDLRT-MKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGY--VRIWDTRKTKF 249 (370)
T ss_pred EEccc-hhhhcchhhhhcceeeeccCCCCceEEEEEcCCCcc--EEEEeccCCCc
Confidence 67654 2334444433333445555544 456666666665 77888764333
No 466
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=72.66 E-value=13 Score=35.83 Aligned_cols=71 Identities=21% Similarity=0.168 Sum_probs=41.1
Q ss_pred cCcEEEEEecCCCCCCchhHHhcccccCCcChHhHHHHH-HHHHHHcCCCCCCcEEEEEeChhHHHHHHHHhh---CCCc
Q 004368 544 RGFIFAIAQIRGGGELGRQWYENGKFLKKKNTFTDFIAC-AEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLNM---RPDL 619 (758)
Q Consensus 544 ~G~~v~~~~~RG~g~~G~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~~---~p~~ 619 (758)
..+.+..++.+|.+... .....++++... ++.+.+. ....++.++|+|+||.++...+.+ .++.
T Consensus 24 ~~~~v~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~l~~~--~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 24 GRRDVSALPLPGFGPGE----------PLPASADALVEAQAEAVLRA--AGGRPFVLVGHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred CCccEEEecCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh--cCCCCeEEEEECHHHHHHHHHHHHHHhCCCC
Confidence 46788888988875311 111233444332 2233322 224679999999999998766664 3444
Q ss_pred eeEEEEc
Q 004368 620 FKAAVAA 626 (758)
Q Consensus 620 f~a~v~~ 626 (758)
...++..
T Consensus 92 ~~~l~~~ 98 (212)
T smart00824 92 PAAVVLL 98 (212)
T ss_pred CcEEEEE
Confidence 5555544
No 467
>PLN02324 triacylglycerol lipase
Probab=72.41 E-value=5.5 Score=43.13 Aligned_cols=40 Identities=10% Similarity=0.053 Sum_probs=28.7
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
.-+.+.+.+..|+++.--..-+|.++|||.||.||..++.
T Consensus 195 areqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHH
Confidence 3456777788777753222247999999999998876664
No 468
>PLN02802 triacylglycerol lipase
Probab=71.32 E-value=5.8 Score=43.87 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 577 TDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 577 ~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
+++.+.+..|+++.--..-+|.|+|||.||.|+..++.
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~ 349 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVAD 349 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHH
Confidence 56777777777653222347999999999998876654
No 469
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=71.13 E-value=41 Score=37.43 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=61.7
Q ss_pred EEEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc---ceeEEEec--CC--eEEEEEeCCCCCCceE
Q 004368 191 YSVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV---TASVEWAG--NE--ALVYITMDEILRPDKA 263 (758)
Q Consensus 191 ~~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~---~~~~~wsp--Dg--~l~y~~~~~~~~~~~v 263 (758)
-...+..+||||+.|+-.. .+|.++|+++++.+. ++++. ...+.|.- || .-++.+.....+...+
T Consensus 145 ~~~~sl~is~D~~~l~~as-------~~ik~~~~~~kevv~-~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~ 216 (541)
T KOG4547|consen 145 PLVSSLCISPDGKILLTAS-------RQIKVLDIETKEVVI-TFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITV 216 (541)
T ss_pred CccceEEEcCCCCEEEecc-------ceEEEEEccCceEEE-EecCCCcceEEEEEEEeccccccceeeeccccccceeE
Confidence 3567889999999987443 589999999999876 44432 44456644 45 3555555555566667
Q ss_pred EEEEcCCCCCCcEEEeeecCCceeeEEEEcCCCc
Q 004368 264 WLHKLEADQSNDICLYHEKDDIYSLGLQASESKK 297 (758)
Q Consensus 264 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~ 297 (758)
|..+-.....+....+..++...+.+-....|+.
T Consensus 217 w~v~~~~kkks~~~sl~~~dipv~~ds~~~ed~~ 250 (541)
T KOG4547|consen 217 WVVEKEDKKKSLSCSLTVPDIPVTSDSGLLEDGT 250 (541)
T ss_pred EEEEcccccchhheeeccCCCCeEeccccccccc
Confidence 7766544433444556555655544433444555
No 470
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.83 E-value=1.3e+02 Score=30.95 Aligned_cols=111 Identities=14% Similarity=0.205 Sum_probs=56.1
Q ss_pred ceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCCCCCcEEEee-ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEE-
Q 004368 238 TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEADQSNDICLYH-EKDDIYSLGLQASESKKFLFIASESKITRFVFYL- 314 (758)
Q Consensus 238 ~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~-~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~- 314 (758)
.+++.|+||. ++|-+. + .+..+.-.+..++-- ....+. -.|+. .+.+.-+|++++. ..+ .+.++.+
T Consensus 88 vS~LTynp~~rtLFav~-n---~p~~iVElt~~Gdli-rtiPL~g~~DpE---~Ieyig~n~fvi~-dER--~~~l~~~~ 156 (316)
T COG3204 88 VSSLTYNPDTRTLFAVT-N---KPAAIVELTKEGDLI-RTIPLTGFSDPE---TIEYIGGNQFVIV-DER--DRALYLFT 156 (316)
T ss_pred ccceeeCCCcceEEEec-C---CCceEEEEecCCceE-EEecccccCChh---HeEEecCCEEEEE-ehh--cceEEEEE
Confidence 6779999999 555443 2 334455444432211 111111 12322 4567778877543 222 2344444
Q ss_pred -eCCCCC-ce----EEee---ccccceee-EEeecCCEEEEEEcCCCCCCcEEEEEeC
Q 004368 315 -DVSKPE-EL----RVLT---PRVVGVDT-AASHRGNHFFITRRSDELFNSELLACPV 362 (758)
Q Consensus 315 -d~~~~~-~~----~~l~---~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~~L~~~~~ 362 (758)
|.++.. .. ..|- +.-.|++- .|++.+..|++...++ + .+|+.+..
T Consensus 157 vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~--P-~~I~~~~~ 211 (316)
T COG3204 157 VDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERN--P-IGIFEVTQ 211 (316)
T ss_pred EcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccC--C-cEEEEEec
Confidence 333321 00 0111 11223343 4899999999998876 2 56777763
No 471
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=69.90 E-value=1.8e+02 Score=33.14 Aligned_cols=206 Identities=13% Similarity=0.119 Sum_probs=0.0
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec--cccCc--ceeEEEecCC-eEEEEEeCCC---------
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK--PLVGV--TASVEWAGNE-ALVYITMDEI--------- 257 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~--~~~~~--~~~~~wspDg-~l~y~~~~~~--------- 257 (758)
.+-...|-| |+....+.. |+ .++++||+++++.... -+... .-+++|.|++ -+|.+...+.
T Consensus 102 AifDl~wap-ge~~lVsas--GD--sT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 102 AIFDLKWAP-GESLLVSAS--GD--STIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred eeEeeccCC-CceeEEEcc--CC--ceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEec
Q ss_pred ------------------------------------------------------------CCCceEEEEEcCCCC-----
Q 004368 258 ------------------------------------------------------------LRPDKAWLHKLEADQ----- 272 (758)
Q Consensus 258 ------------------------------------------------------------~~~~~v~~~~l~~~~----- 272 (758)
.....+..++|....
T Consensus 177 n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ 256 (720)
T KOG0321|consen 177 NGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQ 256 (720)
T ss_pred cchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccccc
Q ss_pred ---CCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC--ceEEeeccccceeeE---EeecCCEEE
Q 004368 273 ---SNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE--ELRVLTPRVVGVDTA---ASHRGNHFF 344 (758)
Q Consensus 273 ---~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~--~~~~l~~~~~~~~~~---~s~dg~~l~ 344 (758)
..+...+......-++++....-|.+|+.+.. .+.||.+++.+-. +...+........|. .+|||..++
T Consensus 257 ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCt---D~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~ 333 (720)
T KOG0321|consen 257 EPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCT---DNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLL 333 (720)
T ss_pred CCCcccCccCcccceeeeEEEEecCCCCeEEEEec---CCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEe
Q ss_pred EEEcCCCCCCcEEEEEeCCCCCccee-eecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCC
Q 004368 345 ITRRSDELFNSELLACPVDNTSETTV-LIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGE 412 (758)
Q Consensus 345 ~~s~~~~~~~~~L~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~ 412 (758)
-.+... +.|...++.+..... +..+...+.-..+.+....-+++..+|.. +.+|++..++.
T Consensus 334 SgSsd~-----~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~--~kiW~l~~~l~ 395 (720)
T KOG0321|consen 334 SGSSDE-----QAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFR--VKIWRLSNGLE 395 (720)
T ss_pred ccCCCc-----ceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcc--eEEEeccCchh
No 472
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=69.46 E-value=1.4e+02 Score=30.64 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=43.6
Q ss_pred EEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceee---EEeecCCEEEEEEcCCCCCCcEEEEEeCC
Q 004368 289 GLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDT---AASHRGNHFFITRRSDELFNSELLACPVD 363 (758)
Q Consensus 289 ~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~---~~s~dg~~l~~~s~~~~~~~~~L~~~~~~ 363 (758)
++.++|--+.-++-. ++....-+++|..+...++.+....+-..| .+||||.+||..-|+....++-|-++|..
T Consensus 72 gi~~~p~~~ravafA-RrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 72 GIAFHPALPRAVAFA-RRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred CeecCCCCcceEEEE-ecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 455666544433322 233344577888876645555444333333 29999999998888764445556666654
No 473
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=68.99 E-value=1.7e+02 Score=31.50 Aligned_cols=130 Identities=12% Similarity=0.103 Sum_probs=63.2
Q ss_pred cCCEEEEEEcCCCCCCcEEEEEeCCCCCcceeeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCcccccc
Q 004368 339 RGNHFFITRRSDELFNSELLACPVDNTSETTVLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEPLKSLQ 418 (758)
Q Consensus 339 dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~~~~l~ 418 (758)
+++.+|+.+.. ..|+.+|.++ +...|...... ...+...++.+++.. .+| .+..++... |+.+
T Consensus 240 ~~~~vy~~~~~-----g~l~a~d~~t-G~~~W~~~~~~---~~~p~~~~~~vyv~~-~~G--~l~~~d~~t-G~~~---- 302 (377)
T TIGR03300 240 DGGQVYAVSYQ-----GRVAALDLRS-GRVLWKRDASS---YQGPAVDDNRLYVTD-ADG--VVVALDRRS-GSEL---- 302 (377)
T ss_pred ECCEEEEEEcC-----CEEEEEECCC-CcEEEeeccCC---ccCceEeCCEEEEEC-CCC--eEEEEECCC-CcEE----
Confidence 35667765543 4688889876 45566443221 224455677776654 344 366777653 4321
Q ss_pred CCceeeccCccc-ccCCCCcccCCcEEEEEEecCCCCCEEEEEECCCCcEEEEEEeeecC-CCCCCC-ceeEEEEeeCCC
Q 004368 419 GGKSVEFIDPVY-SIDPSESVFSSRILRFHYSSLRTPPSVYDYDMDMGISVLKKIETVLG-GFDTNN-YFTERKWASASD 495 (758)
Q Consensus 419 ~~~~i~~p~~~~-~i~~~~~~~d~~~l~~~~sS~~~P~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~s~d 495 (758)
.......+ ... ++...++.+++. + .-..++.+|..+++. +.+. +... .+.... +.-..+.+.+.|
T Consensus 303 ----W~~~~~~~~~~s--sp~i~g~~l~~~-~---~~G~l~~~d~~tG~~-~~~~-~~~~~~~~~sp~~~~~~l~v~~~d 370 (377)
T TIGR03300 303 ----WKNDELKYRQLT--APAVVGGYLVVG-D---FEGYLHWLSREDGSF-VARL-KTDGSGIASPPVVVGDGLLVQTRD 370 (377)
T ss_pred ----EccccccCCccc--cCEEECCEEEEE-e---CCCEEEEEECCCCCE-EEEE-EcCCCccccCCEEECCEEEEEeCC
Confidence 11111001 111 112234455432 2 235799999988873 2222 2211 122222 223456677777
Q ss_pred Ce
Q 004368 496 GT 497 (758)
Q Consensus 496 G~ 497 (758)
|.
T Consensus 371 G~ 372 (377)
T TIGR03300 371 GD 372 (377)
T ss_pred ce
Confidence 74
No 474
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=68.55 E-value=57 Score=38.13 Aligned_cols=110 Identities=15% Similarity=0.203 Sum_probs=64.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEE-CC-CCceeec-cccC---cceeEEEecCCeEEEEEeCCCCCCceEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVID-IE-TGTPVGK-PLVG---VTASVEWAGNEALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~d-l~-~g~~~~~-~~~~---~~~~~~wspDg~l~y~~~~~~~~~~~v~~~ 266 (758)
+.-.++||.|+++|-+-.+ | +|.||. .. .+.-..- .+.. -....+||+||..+|+...+ .-+.++
T Consensus 208 ~t~~~~spn~~~~Aa~d~d-G----rI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E----~VLv~W 278 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDSD-G----RILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGRE----GVLVLW 278 (792)
T ss_pred ceeEEeccccceEEEeccC-C----cEEEEeccccccccccceEEEecccccceeEEecCCceEeecccc----eEEEEE
Confidence 4567899999999866543 4 366664 33 1221111 2221 24668999999655665433 347788
Q ss_pred EcCCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCC
Q 004368 267 KLEADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSK 318 (758)
Q Consensus 267 ~l~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~ 318 (758)
.++++. .. .++.-. ....++.+|||+....+... .+.|.++.+.+
T Consensus 279 q~~T~~--kq-fLPRLg-s~I~~i~vS~ds~~~sl~~~---DNqI~li~~~d 323 (792)
T KOG1963|consen 279 QLETGK--KQ-FLPRLG-SPILHIVVSPDSDLYSLVLE---DNQIHLIKASD 323 (792)
T ss_pred eecCCC--cc-cccccC-CeeEEEEEcCCCCeEEEEec---CceEEEEeccc
Confidence 999884 22 332222 22346789999987655443 34556665543
No 475
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=68.46 E-value=48 Score=34.23 Aligned_cols=102 Identities=13% Similarity=0.186 Sum_probs=60.3
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCc-eeec-cc---cCcceeEEEecCC-eEEEEEeCCCCCCceEEEE
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGT-PVGK-PL---VGVTASVEWAGNE-ALVYITMDEILRPDKAWLH 266 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~-~~~~-~~---~~~~~~~~wspDg-~l~y~~~~~~~~~~~v~~~ 266 (758)
+...+|++|+..+|.+.. ..+|.|+...+.. .... ++ .....++.|+|.+ +|.-...|+ +.-||.
T Consensus 13 itchAwn~drt~iAv~~~-----~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~dr---nayVw~- 83 (361)
T KOG1523|consen 13 ITCHAWNSDRTQIAVSPN-----NHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDR---NAYVWT- 83 (361)
T ss_pred eeeeeecCCCceEEeccC-----CceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCC---Cccccc-
Confidence 566799999999997764 2456776666655 2221 22 2236679999999 886555443 333543
Q ss_pred EcCCCCC-CcEEEeeecCCceeeEEEEcCCCcEEEEEecC
Q 004368 267 KLEADQS-NDICLYHEKDDIYSLGLQASESKKFLFIASES 305 (758)
Q Consensus 267 ~l~~~~~-~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~ 305 (758)
...+.. +..+++-+-+.. ...+.|||.+..+++.+..
T Consensus 84 -~~~~~~WkptlvLlRiNrA-At~V~WsP~enkFAVgSga 121 (361)
T KOG1523|consen 84 -QPSGGTWKPTLVLLRINRA-ATCVKWSPKENKFAVGSGA 121 (361)
T ss_pred -cCCCCeeccceeEEEeccc-eeeEeecCcCceEEeccCc
Confidence 322211 233443333322 2357899998887775544
No 476
>PRK13614 lipoprotein LpqB; Provisional
Probab=68.45 E-value=1.3e+02 Score=34.64 Aligned_cols=124 Identities=9% Similarity=-0.009 Sum_probs=65.2
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCcee-------ec-cccCc-ceeEEEecCC-eEEEEEeCCCCCCc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPV-------GK-PLVGV-TASVEWAGNE-ALVYITMDEILRPD 261 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~-------~~-~~~~~-~~~~~wspDg-~l~y~~~~~~~~~~ 261 (758)
.+..|+|+++| -+|+.+.+.. ..-+.+.+-.+++.. .. -+.+. +..+.-|+|| +++.+...++. .
T Consensus 384 ~Lt~PS~d~~g--~vWtv~~g~~-~~vv~~~~~g~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~--~ 458 (573)
T PRK13614 384 TLTRPSFSPQD--WVWTAGPGGN-GRIVAYRPTGVAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGK--S 458 (573)
T ss_pred CccCCcccCCC--CEEEeeCCCC-ceEEEEecCCCcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCc--c
Confidence 47788999998 4466654332 122333332232211 11 12333 6778999999 88777654332 2
Q ss_pred eEEEEEcCCCCC-CcEEEeee---cCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 262 KAWLHKLEADQS-NDICLYHE---KDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 262 ~v~~~~l~~~~~-~~~~v~~~---~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
+|++..+-.+.. +...+... ....-..++.|..|+..++......+...++++.+..+.
T Consensus 459 ~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~sl~V~~~~~~~~~~~~~v~v~~g~ 521 (573)
T PRK13614 459 RVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDSTVVVTKASATSNVVPELLSVDAGQ 521 (573)
T ss_pred EEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCEEEEEeccCCCcceEEEEEeCCCC
Confidence 466543322211 21222110 001123467899998866665544555678888886554
No 477
>PLN02753 triacylglycerol lipase
Probab=67.44 E-value=8.1 Score=42.95 Aligned_cols=42 Identities=14% Similarity=0.118 Sum_probs=30.6
Q ss_pred cChHhHHHHHHHHHHHcCCCC---CCcEEEEEeChhHHHHHHHHh
Q 004368 573 KNTFTDFIACAEYLIKNCYCT---KEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 573 ~~~~~D~~~~~~~l~~~~~~d---~~~i~i~G~S~GG~l~~~~~~ 614 (758)
....+++.+.++.|+++.--+ .-+|.|+|||.||.||..++.
T Consensus 287 ~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 287 FSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred hhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 344567788888877653221 368999999999999877664
No 478
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=67.17 E-value=2.5e+02 Score=32.59 Aligned_cols=56 Identities=21% Similarity=0.285 Sum_probs=37.8
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc-ceeEEEecCC-eEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV-TASVEWAGNE-ALVYI 252 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~-~~~~~wspDg-~l~y~ 252 (758)
.+.++.|.-||.+|+..... | .|.|=.+++.+.....+++. .+.+.||+|. .++|-
T Consensus 117 vV~SmsWn~dG~kIcIvYeD-G----avIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~ 174 (1189)
T KOG2041|consen 117 VVVSMSWNLDGTKICIVYED-G----AVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFK 174 (1189)
T ss_pred EEEEEEEcCCCcEEEEEEcc-C----CEEEEeeccceecchhcchheccceeecccHHHHHhh
Confidence 56788999999999887653 3 35555666655444344443 4568999998 55554
No 479
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=67.08 E-value=22 Score=40.52 Aligned_cols=113 Identities=15% Similarity=0.145 Sum_probs=61.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCc---ceeEEEecCCeEEEEEeCCCCCCceEEEEEc
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGV---TASVEWAGNEALVYITMDEILRPDKAWLHKL 268 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~---~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l 268 (758)
.|.++.++++..+||-+ ....+|.+|||+.++.++ ++.+. ...+.|.|=+.++ ......-. +-++++
T Consensus 72 pIeSl~f~~~E~Llaag-----sasgtiK~wDleeAk~vr-tLtgh~~~~~sv~f~P~~~~~--a~gStdtd--~~iwD~ 141 (825)
T KOG0267|consen 72 PIESLTFDTSERLLAAG-----SASGTIKVWDLEEAKIVR-TLTGHLLNITSVDFHPYGEFF--ASGSTDTD--LKIWDI 141 (825)
T ss_pred cceeeecCcchhhhccc-----ccCCceeeeehhhhhhhh-hhhccccCcceeeeccceEEe--cccccccc--ceehhh
Confidence 46788999999998743 334589999999988765 33221 3347898887443 11111112 223333
Q ss_pred CCCCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCC
Q 004368 269 EADQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPE 320 (758)
Q Consensus 269 ~~~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~ 320 (758)
... .-.-.|.. .....-.+.++|||+|++.... ...+-+.|+..++
T Consensus 142 Rk~--Gc~~~~~s-~~~vv~~l~lsP~Gr~v~~g~e---d~tvki~d~~agk 187 (825)
T KOG0267|consen 142 RKK--GCSHTYKS-HTRVVDVLRLSPDGRWVASGGE---DNTVKIWDLTAGK 187 (825)
T ss_pred hcc--CceeeecC-CcceeEEEeecCCCceeeccCC---cceeeeecccccc
Confidence 211 11122322 2222223579999999864322 2334455665444
No 480
>PLN00413 triacylglycerol lipase
Probab=66.96 E-value=9.1 Score=42.08 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=27.8
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
.+..+...++.+.++. ...+|.+.|||.||.+|..++.
T Consensus 266 ayy~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 3456677777666553 2468999999999999877664
No 481
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=66.81 E-value=1.5e+02 Score=30.15 Aligned_cols=151 Identities=15% Similarity=0.193 Sum_probs=77.7
Q ss_pred eEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCc--ceeEEEecCCeEEEEEeCCCCCCceEEEEEcCCC
Q 004368 195 CFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV--TASVEWAGNEALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~--~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
++.+..||.. |- +.+.-..+.|+.+|+++|+.... .++.. ..+++-..| +|+-.+- +....+.++..+-
T Consensus 49 GL~~~~~g~L--yE-STG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTW----k~~~~f~yd~~tl 120 (264)
T PF05096_consen 49 GLEFLDDGTL--YE-STGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTW----KEGTGFVYDPNTL 120 (264)
T ss_dssp EEEEEETTEE--EE-EECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEES----SSSEEEEEETTTT
T ss_pred cEEecCCCEE--EE-eCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEe----cCCeEEEEccccc
Confidence 4455556643 22 22333379999999999998753 44442 334554443 6665553 3345778887654
Q ss_pred CCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceE--Eeeccccceee--EEeecCCEEEEEE
Q 004368 272 QSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELR--VLTPRVVGVDT--AASHRGNHFFITR 347 (758)
Q Consensus 272 ~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~--~l~~~~~~~~~--~~s~dg~~l~~~s 347 (758)
+ .+--+.-....|. .+.||+.|+++. +++.|+.+|.++-+..+ .++.....+.. ...--++.+|.-.
T Consensus 121 ~--~~~~~~y~~EGWG----Lt~dg~~Li~SD---GS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANV 191 (264)
T PF05096_consen 121 K--KIGTFPYPGEGWG----LTSDGKRLIMSD---GSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANV 191 (264)
T ss_dssp E--EEEEEE-SSS--E----EEECSSCEEEE----SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEE
T ss_pred e--EEEEEecCCcceE----EEcCCCEEEEEC---CccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEe
Confidence 2 2223332333343 347888887643 45789999987754122 22221111111 1111245566555
Q ss_pred cCCCCCCcEEEEEeCCCCC
Q 004368 348 RSDELFNSELLACPVDNTS 366 (758)
Q Consensus 348 ~~~~~~~~~L~~~~~~~~~ 366 (758)
... -.|+++|.+++.
T Consensus 192 W~t----d~I~~Idp~tG~ 206 (264)
T PF05096_consen 192 WQT----DRIVRIDPETGK 206 (264)
T ss_dssp TTS----SEEEEEETTT-B
T ss_pred CCC----CeEEEEeCCCCe
Confidence 543 478888887643
No 482
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=66.53 E-value=1.6e+02 Score=31.39 Aligned_cols=113 Identities=17% Similarity=0.177 Sum_probs=57.1
Q ss_pred EEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccce-eeEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCcce
Q 004368 291 QASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGV-DTAASHRGNHFFITRRSDELFNSELLACPVDNTSETT 369 (758)
Q Consensus 291 ~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~ 369 (758)
++-.+...+.+.....+...+.++....+. .+++..+..-. ...|++|++ +.+.+++++ .-++-+++... ....
T Consensus 114 ~~~~~~~sv~v~dkagD~~~~di~s~~~~~-~~~~lGhvSml~dVavS~D~~-~IitaDRDE--kIRvs~ypa~f-~Ies 188 (390)
T KOG3914|consen 114 SFIREDTSVLVADKAGDVYSFDILSADSGR-CEPILGHVSMLLDVAVSPDDQ-FIITADRDE--KIRVSRYPATF-VIES 188 (390)
T ss_pred eeeeccceEEEEeecCCceeeeeecccccC-cchhhhhhhhhheeeecCCCC-EEEEecCCc--eEEEEecCccc-chhh
Confidence 333444555444333333333333333232 33333332222 234899986 445556652 34444443221 2234
Q ss_pred eeecCCCCceeeeEEEeCCEEEEEEEeCCeeEEEEEEcCCCCCc
Q 004368 370 VLIPHRESVKLQDIQLFIDHLAVYEREGGLQKITTYRLPAVGEP 413 (758)
Q Consensus 370 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~l~v~~l~~~g~~ 413 (758)
+...+.+ -+..++...+++++.. .|...+++|++.. |+.
T Consensus 189 fclGH~e--FVS~isl~~~~~LlS~--sGD~tlr~Wd~~s-gk~ 227 (390)
T KOG3914|consen 189 FCLGHKE--FVSTISLTDNYLLLSG--SGDKTLRLWDITS-GKL 227 (390)
T ss_pred hccccHh--heeeeeeccCceeeec--CCCCcEEEEeccc-CCc
Confidence 4555544 3467788888775444 5666799999875 543
No 483
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=65.73 E-value=83 Score=33.35 Aligned_cols=124 Identities=15% Similarity=0.097 Sum_probs=73.9
Q ss_pred CCCCcEEEEEeChhHHHHHHHHhhCCCceeEEEEcCCccchhhccC---------CCCCCCChhhhhccCC---CCCHHH
Q 004368 592 CTKEKLCIEGRSAGGLLIGAVLNMRPDLFKAAVAAVPFVDVLTTML---------DPTIPLTTAEWEEWGD---PWKEEF 659 (758)
Q Consensus 592 ~d~~~i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~~~~d~~~~~~---------~~~~~~~~~~~~e~g~---p~~~~~ 659 (758)
..-++.+|.|.|=-|..+...+...|..++ +|.. +.|.++... ..+.|.....|-+-|- .+.+..
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDprv~a-Ivp~--v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~f 307 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPRVFA-IVPF--VYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLF 307 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcchhh-hhhh--HHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHH
Confidence 455899999999999988777777775443 3322 134443210 1122222222222221 123433
Q ss_pred HHHHHhcCccccc-----CCCCCCeEEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Q 004368 660 YFYMKSYSPVDNV-----KAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFS 725 (758)
Q Consensus 660 ~~~l~~~sp~~~i-----~~~~~P~~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 725 (758)
-+.++-.+|+... .+...| =.|+.|.+|+..++..+.-++..|-..+ .++..++..|..
T Consensus 308 kqL~~IiDPlay~~try~~RLalp-KyivnaSgDdff~pDsa~lYyd~LPG~k------aLrmvPN~~H~~ 371 (507)
T COG4287 308 KQLLEIIDPLAYRNTRYQLRLALP-KYIVNASGDDFFVPDSANLYYDDLPGEK------ALRMVPNDPHNL 371 (507)
T ss_pred HHHHHhhcHHHHhhhhhhhhcccc-ceeecccCCcccCCCccceeeccCCCce------eeeeCCCCcchh
Confidence 3344456776555 345777 6778899999999999999999886433 244456899953
No 484
>PLN02761 lipase class 3 family protein
Probab=65.61 E-value=9.4 Score=42.45 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=29.5
Q ss_pred ChHhHHHHHHHHHHHcCC---CC-CCcEEEEEeChhHHHHHHHHh
Q 004368 574 NTFTDFIACAEYLIKNCY---CT-KEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 574 ~~~~D~~~~~~~l~~~~~---~d-~~~i~i~G~S~GG~l~~~~~~ 614 (758)
..-+++.+.++.|++... -+ .-+|.|.|||.||.||..++.
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345677888888876531 12 348999999999998876654
No 485
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.60 E-value=83 Score=33.53 Aligned_cols=67 Identities=24% Similarity=0.153 Sum_probs=46.7
Q ss_pred EEEeccCCCCCCCChHHHHHHHHHHhcCCCCceEEEEecCCCCCCCCCChHHHHHHHHHHHHHHHHhcCCC
Q 004368 680 ILVTAGLNDPRVMYSEPAKFVAKLREMKTDDNILLFKCELGAGHFSKSGRFERLREAAFTYTFLMRALSML 750 (758)
Q Consensus 680 ~Li~~G~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 750 (758)
.|.+.+.+|..+|..+-+++++..++.|..++.+-+....+.+|.- .....+.. ...+|+.+..+..
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r--~~p~~y~~--~~~~Fl~~~~~~~ 294 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFR--SFPKTYLK--KCSEFLRSVISSY 294 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeec--cCcHHHHH--HHHHHHHhccccc
Confidence 4566699999999999999999999999888777776444444432 12223332 2568988876544
No 486
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=65.46 E-value=40 Score=39.27 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=41.7
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYIT 253 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~ 253 (758)
.+....||+||.+|. .|+....+.+|.++|++..-+ ++......+.|||||.++-+.
T Consensus 253 ~V~~L~fS~~G~~Ll-----SGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~ 310 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYLL-----SGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLV 310 (792)
T ss_pred ccceeEEecCCceEe-----ecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEE
Confidence 467788999999885 455567899999999885433 445556779999999444443
No 487
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=65.45 E-value=1.9e+02 Score=30.66 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=61.0
Q ss_pred eEEEecCCeEEEEEeCC--CCCCceEEEEEcCCCCCCcEEEeee-------------cCCceeeEEEEcCCCcEEEEEec
Q 004368 240 SVEWAGNEALVYITMDE--ILRPDKAWLHKLEADQSNDICLYHE-------------KDDIYSLGLQASESKKFLFIASE 304 (758)
Q Consensus 240 ~~~wspDg~l~y~~~~~--~~~~~~v~~~~l~~~~~~~~~v~~~-------------~~~~~~~~~~~S~Dg~~l~~~s~ 304 (758)
++++.+||.++...... ......|+.++...... ..+.... .+.. +-+++++|||+.|++...
T Consensus 89 gi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~G~~~-~~~~vP~~~~~~~~~~~~~~~N~G-~E~la~~~dG~~l~~~~E 166 (326)
T PF13449_consen 89 GIAVPPDGSFWISSEGGRTGGIPPRIRRFDLDGRVI-RRFPVPAAFLPDANGTSGRRNNRG-FEGLAVSPDGRTLFAAME 166 (326)
T ss_pred HeEEecCCCEEEEeCCccCCCCCCEEEEECCCCccc-ceEccccccccccCccccccCCCC-eEEEEECCCCCEEEEEEC
Confidence 57776777665554322 12235688777653221 1111111 1122 236889999997766553
Q ss_pred CC------cc-------eEEEEEeCCC-CCceEE-eec--------cccce-eeEEeecCCEEEEEEcCC---CCCCcEE
Q 004368 305 SK------IT-------RFVFYLDVSK-PEELRV-LTP--------RVVGV-DTAASHRGNHFFITRRSD---ELFNSEL 357 (758)
Q Consensus 305 ~~------~~-------~~l~~~d~~~-~~~~~~-l~~--------~~~~~-~~~~s~dg~~l~~~s~~~---~~~~~~L 357 (758)
+. .. ..|+.+|..+ +..... ..+ ...++ +..+-++++ |+++-... .....+|
T Consensus 167 ~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~-lLvLER~~~~~~~~~~ri 245 (326)
T PF13449_consen 167 SPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGR-LLVLERDFSPGTGNYKRI 245 (326)
T ss_pred ccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCc-EEEEEccCCCCccceEEE
Confidence 31 11 4677788765 211111 111 11222 223456666 55554431 1345789
Q ss_pred EEEeCCC
Q 004368 358 LACPVDN 364 (758)
Q Consensus 358 ~~~~~~~ 364 (758)
+.+++..
T Consensus 246 ~~v~l~~ 252 (326)
T PF13449_consen 246 YRVDLSD 252 (326)
T ss_pred EEEEccc
Confidence 9998754
No 488
>PLN02310 triacylglycerol lipase
Probab=64.56 E-value=10 Score=41.05 Aligned_cols=40 Identities=18% Similarity=0.127 Sum_probs=27.9
Q ss_pred hHhHHHHHHHHHHHcCC-CC-CCcEEEEEeChhHHHHHHHHh
Q 004368 575 TFTDFIACAEYLIKNCY-CT-KEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~-~d-~~~i~i~G~S~GG~l~~~~~~ 614 (758)
..+.+.+.++.|++... -+ .-+|.|+|||.||.||..++.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 44567777777765421 12 358999999999999876664
No 489
>KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only]
Probab=64.28 E-value=70 Score=34.35 Aligned_cols=102 Identities=11% Similarity=0.130 Sum_probs=61.6
Q ss_pred EEEEEEECCCCceeeccccCc------ceeEEEecCCeEEEEEeCCCCCC----ceEEEEEcCCCCCCcEEEeee--cCC
Q 004368 217 YTVYVIDIETGTPVGKPLVGV------TASVEWAGNEALVYITMDEILRP----DKAWLHKLEADQSNDICLYHE--KDD 284 (758)
Q Consensus 217 ~~l~v~dl~~g~~~~~~~~~~------~~~~~wspDg~l~y~~~~~~~~~----~~v~~~~l~~~~~~~~~v~~~--~~~ 284 (758)
.++|++|+.+.+..++.+.++ ..-++|-.. -|+|-...+.++. ++||..+|.+=.=...-+ .. +.+
T Consensus 154 kD~W~fd~~trkweql~~~g~PS~RSGHRMvawK~~-lilFGGFhd~nr~y~YyNDvy~FdLdtykW~Klep-sga~Ptp 231 (521)
T KOG1230|consen 154 KDLWLFDLKTRKWEQLEFGGGPSPRSGHRMVAWKRQ-LILFGGFHDSNRDYIYYNDVYAFDLDTYKWSKLEP-SGAGPTP 231 (521)
T ss_pred hheeeeeeccchheeeccCCCCCCCccceeEEeeee-EEEEcceecCCCceEEeeeeEEEeccceeeeeccC-CCCCCCC
Confidence 479999999998877655543 122566222 4666666555543 367787876531000001 11 344
Q ss_pred ceeeEEEEcCCCcEEEEEecC---------C--cceEEEEEeCCCCC
Q 004368 285 IYSLGLQASESKKFLFIASES---------K--ITRFVFYLDVSKPE 320 (758)
Q Consensus 285 ~~~~~~~~S~Dg~~l~~~s~~---------~--~~~~l~~~d~~~~~ 320 (758)
+..+.+..+|+|..+++..-+ + ..++.|+++.+++.
T Consensus 232 RSGcq~~vtpqg~i~vyGGYsK~~~kK~~dKG~~hsDmf~L~p~~~~ 278 (521)
T KOG1230|consen 232 RSGCQFSVTPQGGIVVYGGYSKQRVKKDVDKGTRHSDMFLLKPEDGR 278 (521)
T ss_pred CCcceEEecCCCcEEEEcchhHhhhhhhhhcCceeeeeeeecCCcCC
Confidence 445567789999988775432 1 23689999987743
No 490
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=64.03 E-value=1.4e+02 Score=31.75 Aligned_cols=118 Identities=13% Similarity=0.193 Sum_probs=60.3
Q ss_pred eeEEEecCCeEEEEEeCCCCCCceEEEEEcCCCCCCcEEEeee-----cCCceeeEEEEcCC---CcEEEEEecC-----
Q 004368 239 ASVEWAGNEALVYITMDEILRPDKAWLHKLEADQSNDICLYHE-----KDDIYSLGLQASES---KKFLFIASES----- 305 (758)
Q Consensus 239 ~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~~~~~~~~v~~~-----~~~~~~~~~~~S~D---g~~l~~~s~~----- 305 (758)
..++|.|||+++.+.. . -+|++.+..... ...+... ....-.++++++|+ ..+|++....
T Consensus 5 ~~~a~~pdG~l~v~e~-~----G~i~~~~~~g~~--~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~ 77 (331)
T PF07995_consen 5 RSMAFLPDGRLLVAER-S----GRIWVVDKDGSL--KTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDG 77 (331)
T ss_dssp EEEEEETTSCEEEEET-T----TEEEEEETTTEE--CEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSS
T ss_pred eEEEEeCCCcEEEEeC-C----ceEEEEeCCCcC--cceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCC
Confidence 4589999998866543 2 258877722221 1222221 12233467888884 3555554432
Q ss_pred -CcceEEEEEeCCCC--C--ceEEeecc-c-------cceeeEEeecCCEEEEEEcCCC---------CCCcEEEEEeCC
Q 004368 306 -KITRFVFYLDVSKP--E--ELRVLTPR-V-------VGVDTAASHRGNHFFITRRSDE---------LFNSELLACPVD 363 (758)
Q Consensus 306 -~~~~~l~~~d~~~~--~--~~~~l~~~-~-------~~~~~~~s~dg~~l~~~s~~~~---------~~~~~L~~~~~~ 363 (758)
.....|.++.++.+ . ..+.+... . .+....|.||| .||+.....+ ...++|++++.+
T Consensus 78 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~~~~~~~~~~~~~~G~ilri~~d 156 (331)
T PF07995_consen 78 GDNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDGGNDDNAQDPNSLRGKILRIDPD 156 (331)
T ss_dssp SSEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-TTTGGGGCSTTSSTTEEEEEETT
T ss_pred CCcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCCCCcccccccccccceEEEeccc
Confidence 22356666666544 1 12222211 1 11223489998 7888875431 235799999976
Q ss_pred C
Q 004368 364 N 364 (758)
Q Consensus 364 ~ 364 (758)
+
T Consensus 157 G 157 (331)
T PF07995_consen 157 G 157 (331)
T ss_dssp S
T ss_pred C
Confidence 5
No 491
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=63.18 E-value=2.9e+02 Score=31.94 Aligned_cols=192 Identities=14% Similarity=0.039 Sum_probs=88.4
Q ss_pred EECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCc---ceeEEEecCC-eEEEEEeCCCCCCceEEEEEcCCC
Q 004368 197 QVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGV---TASVEWAGNE-ALVYITMDEILRPDKAWLHKLEAD 271 (758)
Q Consensus 197 ~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~---~~~~~wspDg-~l~y~~~~~~~~~~~v~~~~l~~~ 271 (758)
+..|+.+.++-+. +|+ ...|.+..-.+++.... .+.+. +.+++|+.-+ .=+|+.....++--++|+..++++
T Consensus 152 ~~~~~~~~~lla~--Ggs-~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~ 228 (764)
T KOG1063|consen 152 AALKNNKTFLLAC--GGS-KFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDD 228 (764)
T ss_pred hhhccCCcEEEEe--cCc-ceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCC
Confidence 4455555443332 333 34454443333332222 33332 4457787655 233333333455567887777764
Q ss_pred CCC----c---------------EEEee-------ecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEe
Q 004368 272 QSN----D---------------ICLYH-------EKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVL 325 (758)
Q Consensus 272 ~~~----~---------------~~v~~-------~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l 325 (758)
..+ + .+.+. .+...+..++.|+|++..|+-.+ ...+.-+|.-|-.+|- +...
T Consensus 229 ~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSAS-aDksmiiW~pd~~tGi-Wv~~ 306 (764)
T KOG1063|consen 229 EDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSAS-ADKSMIIWKPDENTGI-WVDV 306 (764)
T ss_pred ccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecc-cCcceEEEecCCccce-EEEE
Confidence 220 0 00000 02334556789999996665433 3334455555544443 2221
Q ss_pred ec-c-----cccee-eEEeecCCEEEEEEcCCCCCCcEEEEEeCCCCCccee---eecCCCCceeeeEEEe--CCEEEEE
Q 004368 326 TP-R-----VVGVD-TAASHRGNHFFITRRSDELFNSELLACPVDNTSETTV---LIPHRESVKLQDIQLF--IDHLAVY 393 (758)
Q Consensus 326 ~~-~-----~~~~~-~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~---l~~~~~~~~~~~~~~~--~~~l~~~ 393 (758)
.. + ..|+. ..|++++..++ ..... ..+++++ +.+ ...| .+..+.-..+.++.|+ +++|+ .
T Consensus 307 vRlGe~gg~a~GF~g~lw~~n~~~ii-~~g~~--Gg~hlWk-t~d---~~~w~~~~~iSGH~~~V~dv~W~psGeflL-s 378 (764)
T KOG1063|consen 307 VRLGEVGGSAGGFWGGLWSPNSNVII-AHGRT--GGFHLWK-TKD---KTFWTQEPVISGHVDGVKDVDWDPSGEFLL-S 378 (764)
T ss_pred EEeecccccccceeeEEEcCCCCEEE-Eeccc--CcEEEEe-ccC---ccceeeccccccccccceeeeecCCCCEEE-E
Confidence 11 1 11121 23889886433 33333 2478887 222 2233 2223333346677777 56554 4
Q ss_pred EEeCCeeE
Q 004368 394 EREGGLQK 401 (758)
Q Consensus 394 ~~~~g~~~ 401 (758)
...+...+
T Consensus 379 vs~DQTTR 386 (764)
T KOG1063|consen 379 VSLDQTTR 386 (764)
T ss_pred ecccccee
Confidence 44444444
No 492
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=63.10 E-value=1.9e+02 Score=29.88 Aligned_cols=149 Identities=13% Similarity=0.101 Sum_probs=77.3
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-cccCcceeEEEecCCeEEEEEeCCCCCCceEEEEEcCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLVGVTASVEWAGNEALVYITMDEILRPDKAWLHKLEA 270 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~~~~~~~~wspDg~l~y~~~~~~~~~~~v~~~~l~~ 270 (758)
.|+++++||.+..|+.++ -+| .|.++|+.+.+.+.. ......-.-+|.++.+++....+. +|.++++.+
T Consensus 15 ~IS~v~f~~~~~~LLvss-WDg----slrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg-----~vr~~Dln~ 84 (323)
T KOG1036|consen 15 GISSVKFSPSSSDLLVSS-WDG----SLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDG-----QVRRYDLNT 84 (323)
T ss_pred ceeeEEEcCcCCcEEEEe-ccC----cEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCc-----eEEEEEecC
Confidence 478889999988887665 334 588888877654432 222223345787877776655443 588999988
Q ss_pred CCCCcEEEeeecCCceeeEEEEcCCCcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeEEeecCCEEEEEEcCC
Q 004368 271 DQSNDICLYHEKDDIYSLGLQASESKKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTAASHRGNHFFITRRSD 350 (758)
Q Consensus 271 ~~~~~~~v~~~~~~~~~~~~~~S~Dg~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~ 350 (758)
+.. + .+-. .+... ..+..++-..- +++.+-. ..|-++|..... ...+-...+--|..+-.|..|++.+..
T Consensus 85 ~~~-~-~igt-h~~~i-~ci~~~~~~~~-vIsgsWD--~~ik~wD~R~~~--~~~~~d~~kkVy~~~v~g~~LvVg~~~- 154 (323)
T KOG1036|consen 85 GNE-D-QIGT-HDEGI-RCIEYSYEVGC-VISGSWD--KTIKFWDPRNKV--VVGTFDQGKKVYCMDVSGNRLVVGTSD- 154 (323)
T ss_pred Ccc-e-eecc-CCCce-EEEEeeccCCe-EEEcccC--ccEEEEeccccc--cccccccCceEEEEeccCCEEEEeecC-
Confidence 743 2 2222 22221 23444432222 2222211 224455554311 111112222234456667777765543
Q ss_pred CCCCcEEEEEeCCC
Q 004368 351 ELFNSELLACPVDN 364 (758)
Q Consensus 351 ~~~~~~L~~~~~~~ 364 (758)
.++..+|+..
T Consensus 155 ----r~v~iyDLRn 164 (323)
T KOG1036|consen 155 ----RKVLIYDLRN 164 (323)
T ss_pred ----ceEEEEEccc
Confidence 3456666644
No 493
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=62.53 E-value=77 Score=26.39 Aligned_cols=70 Identities=16% Similarity=0.143 Sum_probs=39.5
Q ss_pred eEEECCCCCEEEEEEeC-------------CCCeEEEEEEEECCCCceeeccccC--cceeEEEecCCe-EEEEEeCCCC
Q 004368 195 CFQVSPDNKLVAYAEDT-------------KGDEIYTVYVIDIETGTPVGKPLVG--VTASVEWAGNEA-LVYITMDEIL 258 (758)
Q Consensus 195 ~~~~SPDG~~lAy~~~~-------------~G~e~~~l~v~dl~~g~~~~~~~~~--~~~~~~wspDg~-l~y~~~~~~~ 258 (758)
++.+++|+..|.|+... .+.....|..+|..+++...+ .++ ...+++.|+|+. +++... .
T Consensus 2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl-~~~L~fpNGVals~d~~~vlv~Et-~-- 77 (89)
T PF03088_consen 2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVL-LDGLYFPNGVALSPDESFVLVAET-G-- 77 (89)
T ss_dssp EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEE-EEEESSEEEEEE-TTSSEEEEEEG-G--
T ss_pred ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEe-hhCCCccCeEEEcCCCCEEEEEec-c--
Confidence 35677776667776432 133356899999999986542 222 246799999994 554432 2
Q ss_pred CCceEEEEEcC
Q 004368 259 RPDKAWLHKLE 269 (758)
Q Consensus 259 ~~~~v~~~~l~ 269 (758)
.+++.++-|.
T Consensus 78 -~~Ri~rywl~ 87 (89)
T PF03088_consen 78 -RYRILRYWLK 87 (89)
T ss_dssp -GTEEEEEESS
T ss_pred -CceEEEEEEe
Confidence 2457777664
No 494
>PRK13615 lipoprotein LpqB; Provisional
Probab=62.49 E-value=67 Score=36.72 Aligned_cols=79 Identities=18% Similarity=0.208 Sum_probs=50.1
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-----cc-cC--cceeEEEecCCeEEEEEeCCCCCCceE
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----PL-VG--VTASVEWAGNEALVYITMDEILRPDKA 263 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-----~~-~~--~~~~~~wspDg~l~y~~~~~~~~~~~v 263 (758)
.|..+++|+||.++|...+.+|.....|-.+--.++.++.+ .+ .+ ...++.|..|++|+.+..... ...++
T Consensus 418 ~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~W~~~~~laVl~~~~~-~~~~v 496 (557)
T PRK13615 418 RVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELDVATLTLAPD-GERQV 496 (557)
T ss_pred eeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEeeeccEEcccCcCcceeeEEcCCCEEEEEeccCC-CCceE
Confidence 58899999999999999887664443332232244522222 11 11 245589999998877764332 33468
Q ss_pred EEEEcCCC
Q 004368 264 WLHKLEAD 271 (758)
Q Consensus 264 ~~~~l~~~ 271 (758)
+++.++..
T Consensus 497 ~~v~v~g~ 504 (557)
T PRK13615 497 ELHQVGGP 504 (557)
T ss_pred EEEECCCc
Confidence 88888855
No 495
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=62.46 E-value=3.4e+02 Score=32.59 Aligned_cols=74 Identities=19% Similarity=0.215 Sum_probs=43.6
Q ss_pred EEcCCC-cEEEEEecCCc-ceEEEEEeCCCCCceEEeecccccee--eEEeecCCEEEEEEcCCCCCCcEEEEEeCCC
Q 004368 291 QASESK-KFLFIASESKI-TRFVFYLDVSKPEELRVLTPRVVGVD--TAASHRGNHFFITRRSDELFNSELLACPVDN 364 (758)
Q Consensus 291 ~~S~Dg-~~l~~~s~~~~-~~~l~~~d~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~~L~~~~~~~ 364 (758)
.++.|+ .++.+.....+ ...+..+....+..+..++...-.+. +.++.+.+.++|.+...+....+|+++++..
T Consensus 346 ~~~~d~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~lt~g~w~v~~i~~~~~~~~~i~f~~~~~~~~~~~ly~i~~~~ 423 (755)
T KOG2100|consen 346 VFSSDGSSYLKVDSVSDGGYNHIAYLKLSNGSEPRMLTSGNWEVTSILGYDKDSNRIYFDAYEEDPSERHLYSISLGS 423 (755)
T ss_pred eEeecCCceeEEEeeccCCEEEEEEEEcCCCCccccccccceEEEEeccccCCCceEEEEecCCCCCceEEEEEEccc
Confidence 356665 44444444434 56677776666521444444322221 1245678889998887645667899998865
No 496
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=62.01 E-value=2.3e+02 Score=31.92 Aligned_cols=159 Identities=11% Similarity=0.113 Sum_probs=80.5
Q ss_pred EEeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-----c---ccCc-----ceeEEEecCC-eEEEEEeCCC
Q 004368 192 SVGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-----P---LVGV-----TASVEWAGNE-ALVYITMDEI 257 (758)
Q Consensus 192 ~i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-----~---~~~~-----~~~~~wspDg-~l~y~~~~~~ 257 (758)
.+..+.++|-+.+||++. +...+-.||..+...... . .++. .+.+.|+.|| .+..-+...
T Consensus 177 ~lN~v~in~~hgLla~Gt-----~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G- 250 (703)
T KOG2321|consen 177 ELNVVSINEEHGLLACGT-----EDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG- 250 (703)
T ss_pred cceeeeecCccceEEecc-----cCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCC-
Confidence 466778899999998754 344566777665543310 1 1111 5668999999 776654432
Q ss_pred CCCceEEEEEcCCCCCCcEEEeeecCCceeeEEEEcCC-CcEEEEEecCCcceEEEEEeCCCCCceEEeeccccceeeE-
Q 004368 258 LRPDKAWLHKLEADQSNDICLYHEKDDIYSLGLQASES-KKFLFIASESKITRFVFYLDVSKPEELRVLTPRVVGVDTA- 335 (758)
Q Consensus 258 ~~~~~v~~~~l~~~~~~~~~v~~~~~~~~~~~~~~S~D-g~~l~~~s~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~- 335 (758)
.+++|+|.+. +..++-.....--...+.|-+. +.-.+++. +.. -+-++|-.++++...+-+. .++...
T Consensus 251 ----~v~iyDLRa~--~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~--~~kiWd~~~Gk~~asiEpt-~~lND~C 320 (703)
T KOG2321|consen 251 ----SVLIYDLRAS--KPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKR--ILKIWDECTGKPMASIEPT-SDLNDFC 320 (703)
T ss_pred ----cEEEEEcccC--CceeecccCCccceeeecccccCCCceEEec-chH--HhhhcccccCCceeecccc-CCcCcee
Confidence 5999999876 3444432222111223445332 22223322 222 2334455555522222211 112111
Q ss_pred EeecCCEEEEEEcCCCCCCcEEEEEeCCCCCccee
Q 004368 336 ASHRGNHFFITRRSDELFNSELLACPVDNTSETTV 370 (758)
Q Consensus 336 ~s~dg~~l~~~s~~~~~~~~~L~~~~~~~~~~~~~ 370 (758)
+-|+++ ++|+.+.+ +.-.-|.++.-+| ..+|
T Consensus 321 ~~p~sG-m~f~Ane~--~~m~~yyiP~LGP-aPrW 351 (703)
T KOG2321|consen 321 FVPGSG-MFFTANES--SKMHTYYIPSLGP-APRW 351 (703)
T ss_pred eecCCc-eEEEecCC--CcceeEEccccCC-Cchh
Confidence 335555 66777765 2345566654443 4566
No 497
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=61.13 E-value=2e+02 Score=32.04 Aligned_cols=108 Identities=17% Similarity=0.144 Sum_probs=56.1
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeec-ccc--------CcceeEEEecC----C--eEEEEEe---
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGK-PLV--------GVTASVEWAGN----E--ALVYITM--- 254 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~-~~~--------~~~~~~~wspD----g--~l~y~~~--- 254 (758)
-..+.|.|||+.| ++....| .|++++..++..... .++ +.--++++.|| . ..+|+..
T Consensus 32 Pw~maflPDG~ll-VtER~~G----~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~ 106 (454)
T TIGR03606 32 PWALLWGPDNQLW-VTERATG----KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYK 106 (454)
T ss_pred ceEEEEcCCCeEE-EEEecCC----EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEecc
Confidence 4567999999754 3333235 577777665543211 111 11245788877 2 3444443
Q ss_pred CCCC---CCceEEEEEcCCC---CCCcEEEeeec---CCceeeEEEEcCCCcEEEEEecCC
Q 004368 255 DEIL---RPDKAWLHKLEAD---QSNDICLYHEK---DDIYSLGLQASESKKFLFIASESK 306 (758)
Q Consensus 255 ~~~~---~~~~v~~~~l~~~---~~~~~~v~~~~---~~~~~~~~~~S~Dg~~l~~~s~~~ 306 (758)
.... ....|.+.++... ......++... ...+.-.+.+.|||+ |+++..+.
T Consensus 107 ~~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD~ 166 (454)
T TIGR03606 107 NGDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGEQ 166 (454)
T ss_pred CCCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCc-EEEEECCC
Confidence 1111 2346777776422 11223444322 112233567899996 77776654
No 498
>PLN02162 triacylglycerol lipase
Probab=60.89 E-value=13 Score=40.75 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=26.3
Q ss_pred hHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 575 TFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 575 ~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
.+..+.+.++.+.++. ...+|.+.|||.||.+|..+++
T Consensus 260 ay~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 3456666666555442 2368999999999998876544
No 499
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=60.80 E-value=1.1e+02 Score=31.75 Aligned_cols=152 Identities=14% Similarity=0.043 Sum_probs=0.0
Q ss_pred EeeEEECCCCCEEEEEEeCCCCeEEEEEEEECCCCceeeccccCcceeEEEecCC-e-----------EEEEEeCCCCC-
Q 004368 193 VGCFQVSPDNKLVAYAEDTKGDEIYTVYVIDIETGTPVGKPLVGVTASVEWAGNE-A-----------LVYITMDEILR- 259 (758)
Q Consensus 193 i~~~~~SPDG~~lAy~~~~~G~e~~~l~v~dl~~g~~~~~~~~~~~~~~~wspDg-~-----------l~y~~~~~~~~- 259 (758)
+=++.||+||.+|| +++-..+|.+|++...+... .++-... |+|++ . .|-++....+.
T Consensus 184 VLSvD~~~~gd~i~-----ScGmDhslk~W~l~~~~f~~-~lE~s~~---~~~~~t~~pfpt~~~~fp~fst~diHrnyV 254 (385)
T KOG1034|consen 184 VLSVDFSLDGDRIA-----SCGMDHSLKLWRLNVKEFKN-KLELSIT---YSPNKTTRPFPTPKTHFPDFSTTDIHRNYV 254 (385)
T ss_pred EEEEEEcCCCCeee-----ccCCcceEEEEecChhHHhh-hhhhhcc---cCCCCccCcCCccccccccccccccccchH
Q ss_pred ---------------CceEEEEEcCCCCCC---------cEEEeeecCCce----eeEEEEcCCCcEEEEEecCCcceEE
Q 004368 260 ---------------PDKAWLHKLEADQSN---------DICLYHEKDDIY----SLGLQASESKKFLFIASESKITRFV 311 (758)
Q Consensus 260 ---------------~~~v~~~~l~~~~~~---------~~~v~~~~~~~~----~~~~~~S~Dg~~l~~~s~~~~~~~l 311 (758)
.+.+..+.-|.-... ...++.+-+-.. ++.+++.+-+++|+..-.... +
T Consensus 255 DCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~---v 331 (385)
T KOG1034|consen 255 DCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGK---V 331 (385)
T ss_pred HHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCc---E
Q ss_pred EEEeCCCCC--ceEEeeccccceeeE---EeecCCEEEEEEcCCCCCCcEEEEEe
Q 004368 312 FYLDVSKPE--ELRVLTPRVVGVDTA---ASHRGNHFFITRRSDELFNSELLACP 361 (758)
Q Consensus 312 ~~~d~~~~~--~~~~l~~~~~~~~~~---~s~dg~~l~~~s~~~~~~~~~L~~~~ 361 (758)
|++||+..+ ....++....+.... +|-||..|++..+.. -++++|
T Consensus 332 ~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~-----~Vwrwd 381 (385)
T KOG1034|consen 332 YVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDG-----TVWRWD 381 (385)
T ss_pred EEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCC-----cEEEEE
No 500
>PLN02934 triacylglycerol lipase
Probab=60.65 E-value=13 Score=41.31 Aligned_cols=39 Identities=21% Similarity=0.267 Sum_probs=28.8
Q ss_pred ChHhHHHHHHHHHHHcCCCCCCcEEEEEeChhHHHHHHHHh
Q 004368 574 NTFTDFIACAEYLIKNCYCTKEKLCIEGRSAGGLLIGAVLN 614 (758)
Q Consensus 574 ~~~~D~~~~~~~l~~~~~~d~~~i~i~G~S~GG~l~~~~~~ 614 (758)
..+..+...++.+.++.- ..+|.+.|||.||.+|..++.
T Consensus 302 ~Ay~~v~~~lk~ll~~~p--~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 302 SAYYAVRSKLKSLLKEHK--NAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred hHHHHHHHHHHHHHHHCC--CCeEEEeccccHHHHHHHHHH
Confidence 344567777777776532 358999999999999876654
Done!