BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004369
(758 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/765 (66%), Positives = 612/765 (80%), Gaps = 16/765 (2%)
Query: 1 MASVPWAAAAACTL-ETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGF 59
MAS+P A E++ R+ S+S +K+ +VSYQRS QL+G SE R L F
Sbjct: 1 MASLPSVAVTRTPKSESEFRKYSASFLP-SEKSPSVSYQRS----TQLDGVSE-ARCLDF 54
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+EALS + EG KV+++ YV +LQEC+++K +S+A+ IHAHIVKTG+H+D F+MTFLVNVY
Sbjct: 55 REALSFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVY 114
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
KCG ME A+KVFD LPR NVVSWT+L++GYV +S+PELA+ VF +MLEAG YPTN TLG
Sbjct: 115 AKCGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLG 174
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
TAL+A S L S LGKQIH Y +KY+ E D S+GNSLCSLYS CGSL A+KAF RIR+K
Sbjct: 175 TALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDK 234
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWTTVI A G+NGEA GL+FF +MLSE ++PNEFTLTS S+C M SL +G Q+H
Sbjct: 235 NVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIH 294
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
SL IKLG+ SNL ++NSIMYLYLKCG + EA+KLFD M ++LVTWNAMIAGHA+MMD A
Sbjct: 295 SLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFA 354
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
KDDL+AH GTEALSIF KLN SGMKPDL+TFSS+L++CS LVALEQGEQ+HA T+KTGF
Sbjct: 355 KDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGF 414
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
LSDVVVGTALVNMY KCG IERAS+ FVEMS RTLISWTSMITG+A + QAL LFED
Sbjct: 415 LSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFED 474
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M LAGVRPN++TFVG L+ACS+AGMV EAL YF+MM+ EYKI PVMDHY CLIDMFVRLG
Sbjct: 475 MRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLG 534
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EAFDFIK+MD EPNE IWS+ IAGCR G +ELGFYAAEQLL LKPKD E+Y +LL+
Sbjct: 535 RLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLN 594
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
+++SAG+W++V+ V+ + +EEKL DWSWI IKDK+YSFK N H QS E++++L
Sbjct: 595 MYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGN 654
Query: 660 LVEKAKCFGYKQQESFELTDEE---------SASVYHSEKLAIAFGLLNTPIVSPILVVK 710
L EKAK FGY+ +ES E+TDEE ++ VYHSEKLAIAFGLLNT PI V K
Sbjct: 655 LHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTK 714
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
S +MCRDCHNFI+II+ L+AREII+RDSKRLHKF+NGHC+C DFG
Sbjct: 715 SISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDFG 759
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/766 (60%), Positives = 589/766 (76%), Gaps = 25/766 (3%)
Query: 1 MASVPWAA-AAACTLETKSRQPSSSLA-TLKDKNHTVSYQRSGSKLIQLN--GNSEPVRS 56
MASVP + AA LET R+ S+ + L DK+ +V +Q++ S LIQLN EP
Sbjct: 1 MASVPSVSLTAALKLETHPRKRHSTASFPLNDKDKSVGFQKNHS-LIQLNVVDAEEP--- 56
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
G ++++S Y LLQEC++R + A +IH HIVKTG H+D FVMTFLV
Sbjct: 57 ----------KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLV 106
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
NVY KCG ME A KVFDNLPR NV +WT+L++GYVQNS P LA+ +F+ MLEAG YP+N
Sbjct: 107 NVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNY 166
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TLG L ACSSL+SI GKQ+HAY++KY + DTS+GNSL S YS L AIKAF I
Sbjct: 167 TLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKII 226
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+EK+V+SWT+VI +C +NG+A + L FF MLS+G++PNE+TLTS+ S C ML+L +GA
Sbjct: 227 KEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGA 286
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+HSL IKLGY S++ ++NSIMYLYLKCG + EAQKLF+GM +NLVTWNAMIAGHA+MM
Sbjct: 287 QIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMM 346
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
DLA+DD++AH G+ AL++F KL SGMKPDL+TFSS+L++CS LVALEQGEQIH +K
Sbjct: 347 DLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIK 406
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+G L+DVVVGTALV+MY KCG I++AS+ F+EM +RT+ISWTSMITGFA H LS QALQL
Sbjct: 407 SGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQL 466
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
FEDM L G++PNQVTFVG L+ACS+AG+ EAL YFE+MQK+Y IKPVMDH+ CLIDM++
Sbjct: 467 FEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYL 526
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
RLG +EEAFD + KM+FEPNE IWS+ IAGCR HG +LGFYAAEQLLKLKPKD E+Y
Sbjct: 527 RLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVS 586
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
LL++ +SAGRW+DV+ V+ L +EEK+ + DWSWI IK+KVYSFKPND H QS E++K+
Sbjct: 587 LLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKL 646
Query: 657 LDELVEKAKCFGYKQQESFELTDEE-------SASVYHSEKLAIAFGLLNTPIVSPILVV 709
L+ ++ + K GY+ E E+ ++E S++V HSEKLAIAFGLLN P +PI VV
Sbjct: 647 LETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVV 706
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
KS TMCRDCHNFI+ I+ L REI++RDSK+LHKF+NG+C+C +G
Sbjct: 707 KSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGYG 752
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/763 (59%), Positives = 586/763 (76%), Gaps = 20/763 (2%)
Query: 1 MASVPWAAAAACTLETKSRQPSSSLATLK-DKNHTVSYQRSGSKLIQLNGNSEPVRSLGF 59
MAS +++A TL+ + P S ++ +K ++S+Q+S L F
Sbjct: 1 MASF-FSSAVTATLKLHPQFPKYSPSSYPPEKGQSISFQKS-----------HRFTHLDF 48
Query: 60 QEALSVLTEGPKVQTS-SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
EAL + EG + + YV LLQ+C++++S S +I+H H++KTG H +FFVM+FLVNV
Sbjct: 49 GEALLLNKEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNV 108
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCGNME+A++VF+N+PR NVV+WT+L+ G+VQNSQP+ AIHVF +ML AG+YP+ TL
Sbjct: 109 YAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTL 168
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L ACSSL+S++LG Q HAY++KY + DTSVG++LCSLYS CG L A+KAF+RIRE
Sbjct: 169 SAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIRE 228
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
KNV+SWT+ + ACG+NG V+GLR F +M+SE I+PNEFTLTS S C + SL +G QV
Sbjct: 229 KNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQV 288
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
SL IK GY SNLRVRNS++YLYLK G + EA + F+ M V++VTWNAMIAGHAQMM+L
Sbjct: 289 CSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMEL 348
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
KD+LSA G+EAL IFSKLN SGMKPDL+T SS+L++CSR++A+EQGEQIHA T+KTG
Sbjct: 349 TKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTG 408
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
FLSDV+V T+L++MY KCG IERAS+ F+EMSTRT+I+WTSMITGF+ H +S QAL +FE
Sbjct: 409 FLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFE 468
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
DM LAGVRPN VTFVG L+ACS+AGMV +AL YFE+MQK+YKIKPVMDHY C++DMFVRL
Sbjct: 469 DMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRL 528
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +E+A +FIKKM++EP+E IWS FIAGCR HGN+ELGFYA+EQLL LKPKD E+Y +LL
Sbjct: 529 GRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLL 588
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
++++SA R++DV+ V+ + EK+ + DWSWI IKDKVYSFK ND HP S+ I K L+
Sbjct: 589 NMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLE 648
Query: 659 ELVEKAKCFGYKQ------QESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
+L+ KAK GY+ + E S ++YHSEKLAI FGL N P SPI VVKST
Sbjct: 649 DLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLPNSSPIRVVKST 708
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+CRD HNFIK +++LT REIIV+DSKRLHKFVNG C+C +FG
Sbjct: 709 LICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECSCGNFG 751
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/730 (61%), Positives = 568/730 (77%), Gaps = 23/730 (3%)
Query: 35 VSYQRSGSKLIQLN--GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSN 92
V +Q++ S LIQLN EP G ++++S Y LLQEC++R +
Sbjct: 31 VGFQKNHS-LIQLNVVDAEEP-------------KLGTRIESSYYFPLLQECIDRNLATE 76
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +IH HIVKTG H+D FVMTFLVNVY KCG ME A KVFDNLPR NV +WT+L++GYVQ
Sbjct: 77 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQ 136
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
NS P LA+ +F+ MLEAG YP+N TLG L ACSSL+SI GKQ+HAY++KY + DTS+
Sbjct: 137 NSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSI 196
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
GNSL S YS L AIKAF I+EK+V+SWT+VI +C +NG+A + L FF MLS+G+
Sbjct: 197 GNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGM 256
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+PNE+TLTS+ S C ML+L +GAQ+HSL IKLGY S++ ++NSIMYLYLKCG + EAQK
Sbjct: 257 KPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQK 316
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+GM +NLVTWNAMIAGHA+MMDLA+DD++AH G+ AL++F KL SGMKPDL+TFS
Sbjct: 317 LFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFS 376
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+L++CS LVALEQGEQIH +K+G L+DVVVGTALV+MY KCG I++AS+ F+EM +R
Sbjct: 377 SVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSR 436
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
T+ISWTSMITGFA H LS QALQLFEDM L G++PNQVTFVG L+ACS+AG+ EAL YF
Sbjct: 437 TMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYF 496
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
E+MQK+Y IKPVMDH+ CLIDM++RLG +EEAFD + KM+FEPNE IWS+ IAGCR HG
Sbjct: 497 ELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGK 556
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+LGFYAAEQLLKLKPKD E+Y LL++ +SAGRW+DV+ V+ L +EEK+ + DWSWI
Sbjct: 557 SDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWIS 616
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE-------SASV 685
IK+KVYSFKPND H QS E++K+L+ ++ + K GY+ E E+ ++E S++V
Sbjct: 617 IKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIEDVEVIEKEENEERVLSSTV 676
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLAIAFGLLN P +PI VVKS TMCRDCHNFI+ I+ L REI++RDSK+LHKF+
Sbjct: 677 LHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQLHKFL 736
Query: 746 NGHCTCRDFG 755
NG+C+C +G
Sbjct: 737 NGYCSCGGYG 746
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/668 (65%), Positives = 544/668 (81%), Gaps = 9/668 (1%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
++HAH++KTG+H++FFVM+FLVNVY KCG M A+KVFDNLPR NVV WT+L++GYVQNS
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
QPE+A+ VF DMLE+G++P+N TL AL ACSSLESI LGKQ HA+++KY+ D+S+GN
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+LCSLYS GSL+S++KAF EK+V+SWTT+I ACG+NG A GLR F +ML E ++P
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N+FTLTS+ S+C T+ S +G QVHSL KLG+ SNLR+ NS++YLYLKCG +DEA+ LF
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ M + NL+TWNAMIAGHAQ MDLAKD+ SA GTEAL ++ KLN SG KPDL+T SSI
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
LT+CSRL ALEQGEQIHA T+K+GFLSDVVVGTALV+MY KCG IERA + F++MSTRTL
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISWTSMIT FA H S ALQLFEDM LAG RPNQ+TFVG LAACS+AGMV EAL YFE+
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
MQKEYKIKPVMDHY CL+DMFVRLG ++EAFD IK+MD EPNE IW + IAGCR HGN E
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LGFYAAEQLLKLKP+ E+Y +LL++++SA RWEDV++V+ L +EEK+ + DWS I IK
Sbjct: 481 LGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRISIK 540
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE---------SASV 685
+V+SFK N+ LH +AE+ +L++LV++AK GY+Q E+ E+ D+E S++V
Sbjct: 541 GEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEKAFSSAV 600
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
YHSEKLA+ FGLLNTPI +PI V+KS TMC+DCH+F+K+++S T R II++D KRLHKFV
Sbjct: 601 YHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGKRLHKFV 660
Query: 746 NGHCTCRD 753
NG C+C D
Sbjct: 661 NGQCSCAD 668
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 234/496 (47%), Gaps = 67/496 (13%)
Query: 60 QEALSVLTEGPKVQTSSYVS------LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
Q ++V G +++ S+ S L C + +S++ + HA I+K D +
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGN 120
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L ++Y K G+++ + K F +V+SWT++IS N + + + +F++ML P
Sbjct: 121 ALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEP 180
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ TL + L+ CS+++S LG Q+H+ K E + + NSL LY CG ++ A F
Sbjct: 181 NDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLF 240
Query: 234 NRIREKNVMSWTTVIGA-------CGENGEAVQ----GLRFFSKMLSEGIQPNEFTLTSI 282
NR+ KN+++W +I +N A Q L + K+ G +P+ FTL+SI
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+VC + +L G Q+H+ IK G+ S++ V +++ +Y KCG ++ A+K F MS L
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
++W +MI A+ H AL +F + +G +P+ TF +L CS
Sbjct: 361 ISWTSMITSFAR-----------HGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAG 409
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
+++ + + K + V+ LV+M+ + GR++ A V M
Sbjct: 410 MVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMD----------- 458
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
V PN+ ++ +A C N G E LG++ Q K+
Sbjct: 459 -----------------------VEPNEFIWLLLIAGCRNHG--NEELGFYAAEQL-LKL 492
Query: 522 KP-VMDHYMCLIDMFV 536
KP + Y+ L++M++
Sbjct: 493 KPRSTETYVVLLNMYI 508
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 120/241 (49%), Gaps = 11/241 (4%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+G + + +L E + + S+L C +S +H+ K G + + LV
Sbjct: 165 MGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLV 224
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ-----------NSQPELAIHVFLD 165
+Y KCG ++EA+ +F+ + N+++W ++I+G+ Q A+ ++L
Sbjct: 225 YLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLK 284
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
+ +G P TL + LT CS L ++ G+QIHA +K D VG +L +Y CGS
Sbjct: 285 LNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGS 344
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ A KAF + + ++SWT++I + +G++ L+ F M G +PN+ T + +
Sbjct: 345 IERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAA 404
Query: 286 C 286
C
Sbjct: 405 C 405
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/686 (62%), Positives = 546/686 (79%), Gaps = 7/686 (1%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
YV LLQ+C++ +S S +I+H H++KTG H +FFVM+FLVNVY KCGNME+A++VFDN+
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
R NVV+WT+L+ G+VQNSQP+ AIHVF +ML AG+YP+ TL L ACSSL+S++LG Q
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
HAY++KY + D SVG++LCSLYS CG L A+K F+RIREKNV+SWT+ + AC +NG
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
V+GLR F +M++ I+PNEFTLTS S C +LSL +G QV+SL IK GY SNLRVRNS
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++YLYLK G + EA +LF+ M ++VTWNAMIAGHAQMM+L KD+LSA + G+EAL +F
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
SKLN SGMKPDL+T SS+L++CSR++A+EQGEQIHA T+KTGFLSDV+V T+L++MY KC
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKC 429
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G IERAS+ F+EMSTRT+I+WTSMITGF+ H +S QAL +FEDM LAGVRPN VTFVG L
Sbjct: 430 GSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVL 489
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS+AGMV +AL YFE+MQK+YKIKP MDHY C++DMFVRLG +E+A +FIKKM++EP+
Sbjct: 490 SACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPS 549
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
E IWS FIAGC+ HGN+ELGFYAAEQLL LKPKD E+Y +LL++++SA R+EDV+ V+ +
Sbjct: 550 EFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRKM 609
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ----- 671
EEK+ + DWSWI IKDKVYSFK N HPQS+ I K L++L+ K K GY+
Sbjct: 610 MEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYEMLESVE 669
Query: 672 --QESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
E E S ++YHSEKLAI FGL N P SPI VVKST +CRD HNFIK +++L
Sbjct: 670 ISDEEEEEEKTSSPNIYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKYVSTLA 729
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDFG 755
REIIV+DSKRLHKF NG C+C +FG
Sbjct: 730 GREIIVKDSKRLHKFANGECSCGNFG 755
>gi|357490167|ref|XP_003615371.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355516706|gb|AES98329.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 765
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/770 (58%), Positives = 577/770 (74%), Gaps = 23/770 (2%)
Query: 1 MASVPWAAAAACTLETK-----SRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVR 55
M S+P T K + P +S DK ++S Q++ ++ + +P R
Sbjct: 1 MVSLPSVVVVGVTATLKLHPQFRKYPPTSFPI--DKGQSISLQKT-----HISTHLDPNR 53
Query: 56 SLGFQEALSVLTE-GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+L FQEA S+ E +V +S Y LLQ+C+ S S+ +IIH HIVKTGSH+D F+ +F
Sbjct: 54 NLKFQEAFSLAKESNEEVDSSFYPPLLQQCLENCSFSSTQIIHCHIVKTGSHEDPFLSSF 113
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYP 173
LV VY KCG ME AQ+VFD++ R N V+WT+L+ GYVQNS P+ AIH+F +ML + YP
Sbjct: 114 LVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYP 173
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-SLNSAIKA 232
+N TL AL AC+SL S++LG+Q+HAY++KY + DTS+GN+LCSLY+ CG L + A
Sbjct: 174 SNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTA 233
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTML 290
F RI+EK+V+SWT I ACGE GEA++G+R F +ML + +QPNE+TLTS S C +
Sbjct: 234 FRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVK 293
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L +G QVH+L KLGY SNLRVRNS++YLYLKCG + EAQ+LF GM+ VNLVTWNAMIA
Sbjct: 294 CLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIA 353
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
GHAQMM+L+KD+LSA+ G EAL++FSKLN SGMKPD +TFSS+L++CS+++ALEQGEQI
Sbjct: 354 GHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQI 413
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA T+KTGFLSDVVVG++++NMY KCG IERAS+VF+EMS RT+I WT+MITGFA H S
Sbjct: 414 HARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWS 473
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
QAL LFEDM L G+RPN VTFVG L+AC +AGMV EA YFE+MQKEYKIKPVMDHY+C
Sbjct: 474 KQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVC 533
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
L+DM VRLG ++EAFD IKKMD++ +E IWS I GC GN+ELG AAE+LL LKPKD
Sbjct: 534 LVDMLVRLGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKD 593
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
E+Y +LL+ +VSAGR++DV+ V+N+ REEK+ E DWSWI IKD+VYSF+ ND +S
Sbjct: 594 TETYKLLLNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIES 653
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTDEE-----SASVYHSEKLAIAFGLLNTPIVSP 705
+ I K L++L KAK GY+ E E +D+E S ++YHSEKLAI FGL N P SP
Sbjct: 654 S-IGKSLEDLHIKAKNLGYEMLEYVEKSDKEKEKTSSPTIYHSEKLAITFGLENLPNSSP 712
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+ VVK+T MCRD HNF+K I++LT+REIIV+DSKRLHKFVNG C+C + G
Sbjct: 713 VRVVKNTLMCRDSHNFVKYISTLTSREIIVKDSKRLHKFVNGQCSCGNIG 762
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/680 (62%), Positives = 531/680 (78%), Gaps = 2/680 (0%)
Query: 1 MASVPWAA-AAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGF 59
MAS+P + ++ LE + R+ SS + +K+ + SYQRS S QL+G+ EP++ L F
Sbjct: 1 MASLPSVSLSSTLKLEPELRKHPSSSSLPTEKSPSTSYQRS-SINTQLDGSLEPIKPLEF 59
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
EAL + E K++ S Y+ LLQEC + S+S A++IHAHI+KTG+H+D VMT LVNVY
Sbjct: 60 HEALCFIKEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVY 119
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
KCG M A+K+FD+L R NVV+WT+L++GYVQNSQP +AI VF DMLE+G P+N TLG
Sbjct: 120 AKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLG 179
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
AL ACS++ SI+LGKQ+HA+V+KY+ + D S+GN+LCSLYS GSL+S+I F I EK
Sbjct: 180 IALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEK 239
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT VI ACGENG+A GLRFF++ML E I+PNEFTLT++ S+C L+L +G VH
Sbjct: 240 NVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVH 299
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
SL IKLGY NLR+ NSIMYLYLKCG +DEAQ LF M NLVTWNAMI+GHAQ MDLA
Sbjct: 300 SLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLA 359
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
KDD SA G EALSIF +LN +G KPDL+T SS+LT+CSRL AL QGEQ+HA T+K+G+
Sbjct: 360 KDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGY 419
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
LSDVVVGTALVNMY KCG I +AS+ FVEMSTRTLISWT+MITG A H S QALQLFED
Sbjct: 420 LSDVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFED 479
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M LAGVRPNQ+TFVG LAAC ++GMV EALGYFEMMQKEY+IKPVMDHY CLI MFV+L
Sbjct: 480 MRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLR 539
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EAFD I KMDFEP+E IWS+ IAGCR G ELGFYAAEQLLKLK KD E+Y LL+
Sbjct: 540 RLDEAFDIINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLN 599
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
+++SA RW+DV+ V+ L +EEKL + +DWSWI IK+K++SFK LHP +A+++++L+E
Sbjct: 600 MYISAKRWQDVSRVRKLMKEEKLGKFNDWSWITIKEKIHSFKTTGRLHPHNAKMYELLEE 659
Query: 660 LVEKAKCFGYKQQESFELTD 679
L++KAK GY+ + E+ D
Sbjct: 660 LLDKAKGSGYQSTQHMEILD 679
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 852 bits (2201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/715 (55%), Positives = 529/715 (73%), Gaps = 8/715 (1%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G P+R+L QEA+++LTEG VQ++ YV LL CV SL A +H H+ KTG+ D
Sbjct: 53 GMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGAD 112
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV T LVN Y +CG +A+++FD +P NVV+WT+L++GY NSQP L + VF++MLE
Sbjct: 113 MFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLE 172
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G YP++ TLG L AC + + LGKQ+H Y +KY E TS+GNSLCSLY+ GSL+S
Sbjct: 173 MGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDS 232
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A++AF RI EKNV++WTT+I AC E+ E V+ GL F ML +G+ PNEFTLTS+ S+CG
Sbjct: 233 ALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCG 292
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
T L L +G QV + K+G +NL V+NS MYLYL+ G DEA +LF+ M +++TWNA
Sbjct: 293 TRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNA 352
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G+AQ+MD AKDDL A + G +AL+IF L S MKPDL+TFSSIL++CS ++ALEQG
Sbjct: 353 MISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG 412
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQIHA T+K+GFLSDVVV +ALVNMY KCG I+ A++ F+EM TRT ++WTSMI+G++ H
Sbjct: 413 EQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH 472
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+A+QLFE+M LAGVRPN++TFV L+ACS AG+V EA YF+MM+KEY I+PV+DH
Sbjct: 473 GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDH 532
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
Y C+IDMFVRLG +E+AF FIK+ FEPNE IWS +AGCR HGNMEL FYAA++LL+LK
Sbjct: 533 YGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELK 592
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
PK E+Y +LL++++S RW+DVA V+ L ++E + D SWI IKDKVY F+ ND H
Sbjct: 593 PKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTH 652
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESFELTDEES-------ASVYHSEKLAIAFGLLNT 700
PQ+ E++++L+ L+EKAK GY+ ++ EL+D E + +HSE+LA+A GLL T
Sbjct: 653 PQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQT 712
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
P + + V K+ TMCRDCH+ IK+ + L REIIVRDSKRLHKF +G C+C DFG
Sbjct: 713 PPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDFG 767
>gi|302142104|emb|CBI19307.3| unnamed protein product [Vitis vinifera]
Length = 683
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/765 (58%), Positives = 542/765 (70%), Gaps = 95/765 (12%)
Query: 1 MASVPWAAAAACTL-ETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGF 59
MAS+P A E++ R+ S+S +K+ +VSYQRS QL+G SE R L F
Sbjct: 1 MASLPSVAVTRTPKSESEFRKYSASFLP-SEKSPSVSYQRS----TQLDGVSE-ARCLDF 54
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+EALS + EG KV+++ YV +LQEC+++K
Sbjct: 55 REALSFIREGTKVESAFYVPILQECIDKKL------------------------------ 84
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
A+KVFD LPR NVVSWT+L++GYV +S+PELA+ VF +MLEAG YPTN TLG
Sbjct: 85 -------TARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLG 137
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
TAL+A S L S LGKQIH Y +KY+ E D S+GNSLCSLYS CGSL A+KAF RIR+K
Sbjct: 138 TALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDK 197
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWTTVI A G+NGEA GL+FF +MLSE ++PNEFTLTS S+C M SL +G Q+H
Sbjct: 198 NVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIH 257
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
SL IKLG+ SNL ++NSIMYLYLKCG + EA+KLFD M ++LVTWNAMIAGHA+MMD A
Sbjct: 258 SLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFA 317
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
KDDL+AH GTEALSIF KLN SGMKPDL+TFSS+L++CS LVALEQGEQ+HA T+KTGF
Sbjct: 318 KDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGF 377
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
LSDVV G QAL LFED
Sbjct: 378 LSDVVNGQP------------------------------------------QQALLLFED 395
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M LAGVRPN++TFVG L+ACS+AGMV EAL YF+MM+ EYKI PVMDHY CLIDMFVRLG
Sbjct: 396 MRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLG 455
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EAFDFIK+MD EPNE IWS+ IAGCR G +ELGFYAAEQLL LKPKD E+Y +LL+
Sbjct: 456 RLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLN 515
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
+++SAG+W++V+ V+ + +EEKL DWSWI IKDK+YSFK N H QS E++++L
Sbjct: 516 MYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGN 575
Query: 660 LVEKAKCFGYKQQESFELTDEE---------SASVYHSEKLAIAFGLLNTPIVSPILVVK 710
L EKAK FGY+ +ES E+TDEE ++ VYHSEKLAIAFGLLNT PI V K
Sbjct: 576 LHEKAKSFGYEWEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTK 635
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
S +MCRDCHNFI+II+ L+AREII+RDSKRLHKF+NGHC+C DFG
Sbjct: 636 SISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFINGHCSCGDFG 680
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/715 (55%), Positives = 527/715 (73%), Gaps = 8/715 (1%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G P+R L QEA+++LTEG VQ++ YV LL CV SL A +H H+ KTG+ D
Sbjct: 53 GMEAPLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASAD 112
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV T LVN Y +C +A+++FD +P NVV+WT+L++GY NSQP L + VF++MLE
Sbjct: 113 MFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLE 172
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G YP++ TLG L AC + + LGKQ+H Y +KY E TS+GNSLCSLY+ GSL+S
Sbjct: 173 MGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDS 232
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A++AF RI EKNV++WTT+I AC E+ E V+ G+ F ML +G+ PNEFTLTS+ S+CG
Sbjct: 233 ALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCG 292
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
T L L +G QV + K+G +NL V+NS MYLYL+ G DEA +LF+ M +++TWNA
Sbjct: 293 TRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNA 352
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G+AQ+MD AKDDL A + G +AL+IF L S MKPDL+TFSSIL++CS ++ALEQG
Sbjct: 353 MISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG 412
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQIHA T+K+GFLSDVVV +ALVNMY KCG I+ A++ F+EM TRT ++WTSMI+G++ H
Sbjct: 413 EQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH 472
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+A+QLFE+M LAGVRPN++TFV L+ACS AG+V EA YF+MM+KEY I+PV+DH
Sbjct: 473 GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDH 532
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
Y C+IDMFVRLG +E+AF FIK+ FEPNE IWS +AGCR HGNMEL FYAA++LL+LK
Sbjct: 533 YGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELK 592
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
PK E+Y +LL++++S RW+DVA V+ L ++E + D SWI IKDKVY F+ ND H
Sbjct: 593 PKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTH 652
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESFELTDEES-------ASVYHSEKLAIAFGLLNT 700
PQ+ E++++L+ L+EKAK GY+ ++ EL+D E + +HSE+LA+A GLL T
Sbjct: 653 PQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQT 712
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
P + + V K+ TMCRDCH+ IK+ + L REIIVRDSKRLHKF +G C+C DFG
Sbjct: 713 PPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDFG 767
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/773 (53%), Positives = 544/773 (70%), Gaps = 24/773 (3%)
Query: 1 MASVPWAAAAACTLETKSR---------QPSSSLATLKDKNHTVSYQRSGSKLIQLNGNS 51
MAS+P A + + T R P S+ DK + SYQ GS + NG
Sbjct: 1 MASIPSLAVSGGAVATAFRAVLAADAHKPPPGSVGF--DKGN--SYQ--GSTQVLENGRL 54
Query: 52 E-PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
E P R L QEA+++L EG VQ++ YV LL C+ SL A+ +H H+VKTG+ D F
Sbjct: 55 EAPPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIF 114
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V T LVNVY +CGN ++A+ +FD +P NVV+WT+LI+GY NSQP LA+ VF++ML+ G
Sbjct: 115 VATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLG 174
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
YP++ TLG L+AC + +I LGKQ+H Y +KY TS+GNSLC LY+ G+L S I
Sbjct: 175 RYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGI 234
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+AF RI +KNV++WTT+I AC E+ + GL F ML + PNEFTLTS+ S+CGT
Sbjct: 235 RAFKRIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTS 294
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L + +G QV K+G A+NL V+NS MYLYL+ G +EA +LF+ M +++TWNAMI
Sbjct: 295 LDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMI 354
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G AQ+MD AKDDL A + G +AL IF L S MKPDL+TFSSIL++CS ++ALEQGEQ
Sbjct: 355 SGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQ 414
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IHA T+KTGFLSDVVV +ALVNMY KCG IE A++ FVEM TRTL++WTSMI+G++ H
Sbjct: 415 IHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGR 474
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
H A+QLFEDM+LAG +PN++TFV L+ACS AG+V EA+ YF+MMQ EY I+P+MDHY
Sbjct: 475 PHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYG 534
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C+IDMFVRLG +++A+ FIK+ FEPNE IWS +AGCR HGNMEL FYAA++LL+LKPK
Sbjct: 535 CMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPK 594
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
E+Y +LL++++S GRW DVA V+ L++ E L D SWI I+DKVY FK +D HPQ
Sbjct: 595 VVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQ 654
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEE-------SASVYHSEKLAIAFGLLNTPI 702
S E++++L+ L+EKAK GY+ ++ EL D E + +HSE+LA+A GLL P
Sbjct: 655 STELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPP 714
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+ + K+ TMCRDCH+ IK + L REI+VRDSKRLHKF +G C+C DFG
Sbjct: 715 GVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDFG 767
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/773 (52%), Positives = 543/773 (70%), Gaps = 24/773 (3%)
Query: 1 MASVPWAAA--AACTLET----KSRQPSSSLATLKDKNH----TVSYQRSGSKLIQLNGN 50
MASVP A AA SR+P S + DKN+ ++ ++GS +
Sbjct: 1 MASVPSVAVPVAASGFPAAGGADSRRPPPSSVSAADKNNWNGRSIQAAQNGSTM------ 54
Query: 51 SEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
P+R L EA+++L EG VQ++ YV LL CV SL A +H H+VKTG+ D F
Sbjct: 55 EAPLRPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMF 114
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V T LVN Y +CG ++A+ +FD +P NVV+WT+LI+GY NSQ A+ VF++MLEAG
Sbjct: 115 VATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAG 174
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
YP++ TLG L ACS+ + LG Q+H Y +KY+ TS+GNSLC +Y+ GSL SA+
Sbjct: 175 RYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAM 234
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+AF + +KNV++WTT+I AC E+ + GL F ML +G+ PNEFTLTS+ S+CGT
Sbjct: 235 RAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTR 294
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L L +G QV + K+G +N+ V+NS MYLYL+ G DEA + F+ M V+++TWNAMI
Sbjct: 295 LDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMI 354
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G+AQ+M+ AKDDL A + G +AL +F L S MKPDL+TFSSIL++CS ++ALEQGEQ
Sbjct: 355 SGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQ 414
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IHA T+KTGFLSDVVV +ALVNMY KCG IE A++ FVEMS RTL++WTSMI+G++ H
Sbjct: 415 IHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGR 474
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+A+QLFEDM AGVRPN++TFV L+ACS AG+ +A YF+MM++EYKI+P++DHY
Sbjct: 475 PQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYG 534
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++DMFVRLG +++AF FI++ FEPNE IWS +AGCR HGNMEL FYAA++L++L+PK
Sbjct: 535 CMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPK 594
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
E+Y +LL++++S RW DVA V+ L ++E L D SWI IKDKVY FK ND H
Sbjct: 595 GIETYVLLLNMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHEL 654
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEE------SASV-YHSEKLAIAFGLLNTPI 702
S E++++L+ L+EKAK GY+ +S EL+D E + SV +HSE+LA+A GLL TP
Sbjct: 655 SDELYQLLENLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPP 714
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+ + V K+ TMCRDCH+ IK + L REI+VRDSKRLHKF +G C+C DFG
Sbjct: 715 GATVRVTKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDFG 767
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/773 (50%), Positives = 535/773 (69%), Gaps = 19/773 (2%)
Query: 1 MASVPWAAAAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSE---PVRSL 57
MAS+P A + + P T + SYQRS ++ ++ NG E P R L
Sbjct: 1 MASIPSLAVSGAATAVPAVVPLKPPPTSAAFDKGTSYQRSSAQALE-NGRLEHESPPRPL 59
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
QEA+ +L +G VQ++ YV LL CV L A +H H+VKTG+ D FV T LVN
Sbjct: 60 DAQEAMGMLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVN 119
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
VY +C + +A+++FD +P NVV+WT+LI+G+ NS+P LA+ VF++MLE G YP++ T
Sbjct: 120 VYMRCASSRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYT 179
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
LG L+ACS+ I LG+Q+H Y +KY + TS+GNSLC LY G L S ++AF
Sbjct: 180 LGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTP 239
Query: 238 EKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+KNV++WTT+I +C E+ + GL F ML G+ PNEFTLTS+ S+CG L + +G
Sbjct: 240 DKNVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGK 299
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
QV + K+G +NL V+NS MYLYL+ G DEA +LF+ M +++TWNAMI+G+AQ+M
Sbjct: 300 QVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIM 359
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
D AKDDL A + G +AL +F L S +KPDL+TFSSIL++CS ++ALEQGEQIHA T+K
Sbjct: 360 DSAKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIK 419
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
TG LSDVVV +ALVNMY KCG IE A++ FVEM TRT ++WTSMI+G++ H S A+QL
Sbjct: 420 TGCLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQL 479
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
FEDM+L+G RPN++TFV L+ACS AG+V EA YF+MM+ EY I+P++DHY C++DMFV
Sbjct: 480 FEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFV 539
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
RLG +++AF FIK+ FEPNE IWS +AGCR HGNMEL FYAA++LL+LKPK E+Y +
Sbjct: 540 RLGRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVL 599
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
LL++++S GRW DVA V+ L + E + D SWI I+DKVY F+ +D HPQ+ E++++
Sbjct: 600 LLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQL 659
Query: 657 LDELVEKAKCFGYKQQ--------ESFELTDEESASV------YHSEKLAIAFGLLNTPI 702
L+ L+EKAK GY+ +S E D++ A+ +HSE+LA+A GLL TP
Sbjct: 660 LENLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPP 719
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+ + V K+ TMCRDCH+ IK + L REI+VRDSKRLHKF +G C+C DFG
Sbjct: 720 GATVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDFG 772
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/715 (52%), Positives = 503/715 (70%), Gaps = 48/715 (6%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G P+R L QEA+++LTEG VQ++ YV LL
Sbjct: 53 GMEAPLRPLDVQEAMTMLTEGKAVQSAMYVPLLHRAAR---------------------- 90
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+A+++FD +P NVV+WT+L++GY NSQP L + VF++MLE
Sbjct: 91 ------------------DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLE 132
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G YP++ TLG L AC + + LGKQ+H Y +KY E TS+GNSLCSLY+ GSL+S
Sbjct: 133 MGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDS 192
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A++AF RI EKNV++WTT+I AC E+ E V+ G+ F ML +G+ PNEFTLTS+ S+CG
Sbjct: 193 ALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCG 252
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
T L L +G QV + K+G +NL V+NS MYLYL+ G DEA +LF+ M +++TWNA
Sbjct: 253 TRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNA 312
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G+AQ+MD AKDDL A + G +AL+IF L S MKPDL+TFSSIL++CS ++ALEQG
Sbjct: 313 MISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQG 372
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQIHA T+K+GFLSDVVV +ALVNMY KCG I+ A++ F+EM TRT ++WTSMI+G++ H
Sbjct: 373 EQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQH 432
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+A+QLFE+M LAGVRPN++TFV L+ACS AG+V EA YF+MM+KEY I+PV+DH
Sbjct: 433 GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDH 492
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
Y C+IDMFVRLG +E+AF FIK+ FEPNE IWS +AGCR HGNMEL FYAA++LL+LK
Sbjct: 493 YGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELK 552
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
PK E+Y +LL++++S RW+DVA V+ L ++E + D SWI IKDKVY F+ ND H
Sbjct: 553 PKGIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTH 612
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-------VYHSEKLAIAFGLLNT 700
PQ+ E++++L+ L+EKAK GY+ ++ EL+D E +HSE+LA+A GLL T
Sbjct: 613 PQATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQT 672
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
P + + V K+ TMCRDCH+ IK+ + L REIIVRDSKRLHKF +G C+C DFG
Sbjct: 673 PPGATVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDFG 727
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 199/461 (43%), Gaps = 73/461 (15%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
+ +I E LG + +L +G + S++ C R L+ + + A
Sbjct: 209 TTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSF 268
Query: 102 KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ--------- 152
K G + V + +Y + G +EA ++F+ + ++++W ++ISGY Q
Sbjct: 269 KIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDL 328
Query: 153 --NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
S+ A+ +F D+ + P T + L+ CS++ ++ G+QIHA +K D
Sbjct: 329 QARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDV 388
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
V ++L ++Y+ CG + A KAF + + ++WT++I ++G+ + ++ F +M
Sbjct: 389 VVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLA 448
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G++PNE T S+ S C YA GLV+EA
Sbjct: 449 GVRPNEITFVSLLSAC-------------------SYA----------------GLVEEA 473
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+ FD M + ++ + M+D+ G E FS + +G +P+
Sbjct: 474 EHYFDMMKKEYCI--EPVVDHYGCMIDMF-----VRLGRVE--DAFSFIKRTGFEPNEAI 524
Query: 391 FSSILTIC----SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+SS++ C + +A +++ L LK + ++ L+NMY R + +RV
Sbjct: 525 WSSLVAGCRSHGNMELAFYAADKL--LELKPKGIETYIL---LLNMYISTERWQDVARVR 579
Query: 447 VEMST--------RTLISWTSMITGFANHSLSH-QALQLFE 478
M R+ I+ + F + +H QA +L++
Sbjct: 580 KLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQ 620
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/589 (53%), Positives = 425/589 (72%), Gaps = 15/589 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+ACS+ I LG+Q+H Y +KY + TS+GNSLC LY G L S ++AF +KNV
Sbjct: 2 LSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKNV 61
Query: 242 MSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
++WTT+I +C E+ + GL F ML G+ PNEFTLTS+ S+CG L + +G QV +
Sbjct: 62 ITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQA 121
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
K+G +NL V+NS MYLYL+ G DEA +LF+ M +++TWNAMI+G+AQ+MD AK
Sbjct: 122 FCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAK 181
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
DDL A + G +AL +F L S +KPDL+TFSSIL++CS ++ALEQGEQIHA T+KTG L
Sbjct: 182 DDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCL 241
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
SDVVV +ALVNMY KCG IE A++ FVEM TRT ++WTSMI+G++ H S A+QLFEDM
Sbjct: 242 SDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDM 301
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+L+G RPN++TFV L+ACS AG+V EA YF+MM+ EY I+P++DHY C++DMFVRLG
Sbjct: 302 VLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGR 361
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+++AF FIK+ FEPNE IWS +AGCR HGNMEL FYAA++LL+LKPK E+Y +LL++
Sbjct: 362 LDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNM 421
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
++S GRW DVA V+ L + E + D SWI I+DKVY F+ +D HPQ+ E++++L+ L
Sbjct: 422 YISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLENL 481
Query: 661 VEKAKCFGYKQQ--------ESFELTDEESASV------YHSEKLAIAFGLLNTPIVSPI 706
+EKAK GY+ +S E D++ A+ +HSE+LA+A GLL TP + +
Sbjct: 482 LEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGATV 541
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
V K+ TMCRDCH+ IK + L REI+VRDSKRLHKF +G C+C DFG
Sbjct: 542 RVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDFG 590
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 219/474 (46%), Gaps = 62/474 (13%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L C + + + +H + +K G+ + L +Y K G++E + F P N
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60
Query: 140 VVSWTSLISGYVQNSQP-ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V++WT++IS ++ +L + +FLDMLE G P TL + ++ C + + LGKQ+
Sbjct: 61 VITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQ 120
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE----- 253
A+ K E + V NS LY G + A++ F + ++++W +I +
Sbjct: 121 AFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSA 180
Query: 254 ------NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
Q L+ F ++ ++P+ FT +SI SVC M++L G Q+H+ IK G
Sbjct: 181 KDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGC 240
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S++ V ++++ +Y KCG ++ A K F M VTW +MI+G++Q H
Sbjct: 241 LSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQ-----------HG 289
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+A+ +F + SG +P+ TF S+L+ CS +E+ E+ + + +V
Sbjct: 290 RSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHY 349
Query: 428 A-LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+V+M+ + GR++ A F + G
Sbjct: 350 GCMVDMFVRLGRLDDA----------------------------------FSFIKRTGFE 375
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP-VMDHYMCLIDMFVRLG 539
PN+ + +A C + G + A F + ++KP V++ Y+ L++M++ G
Sbjct: 376 PNEAIWSSLVAGCRSHGNMELA---FYAADRLLELKPKVIETYVLLLNMYISTG 426
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 208/496 (41%), Gaps = 85/496 (17%)
Query: 12 CTLETKSRQPSSSLATLK---DKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTE 68
C L KS S L K DKN +++ + +I E LG L +L
Sbjct: 37 CRLYCKSGDLESGLRAFKGTPDKN-VITW----TTMISSCAEDENYLDLGLSLFLDMLEG 91
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + S++ C R +S + + A K G + V + +Y + G +EA
Sbjct: 92 GVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEA 151
Query: 129 QKVFDNLPRINVVSWTSLISGYVQ-----------NSQPELAIHVFLDMLEAGNYPTNVT 177
++F+ + ++++W ++ISGY Q S+ A+ +F D++ + P T
Sbjct: 152 MRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELKPDLFT 211
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ L+ CS++ ++ G+QIHA +K D V ++L ++Y+ CGS+ A KAF +
Sbjct: 212 FSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMP 271
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ ++WT++I ++G + ++ F M+ G +PNE T S+ S C
Sbjct: 272 TRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSAC----------- 320
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
YA GLV+EA++ FD M N ++ + M+D
Sbjct: 321 --------SYA----------------GLVEEAERYFDMMR--NEYHIEPLVDHYGCMVD 354
Query: 358 ----LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG--EQIH 411
L + D FS + +G +P+ +SS++ C +E
Sbjct: 355 MFVRLGRLD-----------DAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADR 403
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV--------FVEMSTRTLISWTSMITG 463
L LK + V+ L+NMY GR +RV + R+ I+ +
Sbjct: 404 LLELKPKVIETYVL---LLNMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYF 460
Query: 464 FANHSLSH-QALQLFE 478
F ++H QA +L++
Sbjct: 461 FRADDMTHPQATELYQ 476
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L+ CS ++ G+Q+H ++K G + +G +L +Y K G +E R F +
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60
Query: 454 LISWTSMITGFA-NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+I+WT+MI+ A + + L LF DML GV PN+ T ++ C + +LG
Sbjct: 61 VITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLC--GARLDMSLGK- 117
Query: 513 EMMQKEYKIK-----PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
++ YK+ PV + M L ++R G +EA ++MD + + W+ I+G
Sbjct: 118 QVQAFCYKVGCEANLPVKNSTMYL---YLRKGETDEAMRLFEEMD-SSSIITWNAMISG 172
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/683 (38%), Positives = 405/683 (59%), Gaps = 16/683 (2%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
++S+++ C ++ L +H I+ G D V T L ++Y KCG++E A++VFD +P
Sbjct: 123 FLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMP 182
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ +VVSW ++I+GY QN QP A+ +F +M G P + TL + + C+ L ++ GKQ
Sbjct: 183 KRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQ 242
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH Y ++ E D V N L ++Y+ CG++N+A K F R+ ++V SW +IG N +
Sbjct: 243 IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQ 302
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L FF++M GI+PN T+ S+ C + +L G Q+H I+ G+ SN V N+
Sbjct: 303 HHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNA 362
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG V+ A KLF+ M N+V WNA+I+G++Q H EAL++F
Sbjct: 363 LVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQ-----------HGHPHEALALF 411
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ + G+KPD + S+L C+ +ALEQG+QIH T+++GF S+VVVGT LV++Y KC
Sbjct: 412 IEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKC 471
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + A ++F M + ++SWT+MI + H AL LF M G + + + F L
Sbjct: 472 GNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAIL 531
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS+AG+V + L YF+ M+ +Y + P ++HY CL+D+ R G ++EA IK M EP+
Sbjct: 532 TACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPD 591
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + CR H N+ELG AA+ L +L P + Y +L +I+ A RWEDVA ++ +
Sbjct: 592 ANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKM 651
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+E+ + + S + + V +F D HPQS +I+ +L+ L E+ + GY +
Sbjct: 652 MKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLA 711
Query: 677 LTD-EESAS----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D EE A HSEKLAI+FG++NT PI ++K+ +C DCHN K I+ + R
Sbjct: 712 LQDVEEEAKENILSSHSEKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGR 771
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EIIVRD+ R H NG C+C D+
Sbjct: 772 EIIVRDANRFHHVKNGFCSCGDY 794
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 268/520 (51%), Gaps = 49/520 (9%)
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
R N V W I GYV+N A+ ++ M G P + + + AC S ++ G++
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H ++ E D VG +L S+Y+ CGSL +A + F+R+ +++V+SW +I +NG+
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L FS+M GI+PN TL S+ VC +L+L G Q+H I+ G S++ V N
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG V+ A KLF+ M ++ +WNA+I G+ S ++ EAL+ F
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGY-----------SLNSQHHEALAFF 310
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+++ G+KP+ T S+L C+ L ALEQG+QIH +++GF S+ VVG ALVNMY KC
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC 370
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + A ++F M + +++W ++I+G++ H H+AL LF +M G++P+ V L
Sbjct: 371 GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430
Query: 497 AACSN--------------------------AGMV--YEALGYFEMMQKEYKIKPVMD-- 526
AC++ G+V Y G QK ++ P D
Sbjct: 431 PACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVV 490
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMD---FEPNEVIWSVFIAGCRRHGNMELG---FYAA 580
+ +I + G E+A KM + + + ++ + C G ++ G F
Sbjct: 491 SWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCM 550
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTRE 619
+ L PK E YA L+D+ AG ++ ++KN++ E
Sbjct: 551 KSDYGLAPK-LEHYACLVDLLGRAGHLDEANGIIKNMSLE 589
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/479 (30%), Positives = 247/479 (51%), Gaps = 25/479 (5%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N +P +L + V G K +S+ VS++ C + +L + IH + +++G D
Sbjct: 199 NGQPYEALALFSEMQV--NGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDV 256
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V+ LVN+Y KCGN+ A K+F+ +P +V SW ++I GY NSQ A+ F M
Sbjct: 257 LVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVR 316
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P ++T+ + L AC+ L ++ G+QIH Y ++ E + VGN+L ++Y+ CG++NSA
Sbjct: 317 GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSA 376
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
K F R+ +KNV++W +I ++G + L F +M ++GI+P+ F + S+ C
Sbjct: 377 YKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHF 436
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L+L G Q+H I+ G+ SN+ V ++ +Y KCG V+ AQKLF+ M ++V+W MI
Sbjct: 437 LALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMI 496
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+ H G +AL++FSK+ +G K D F++ILT CS ++QG Q
Sbjct: 497 LAYG-----------IHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545
Query: 410 -IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG---F 464
+ G + LV++ + G ++ A+ + MS + W +++
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIH 605
Query: 465 ANHSLSHQALQ-LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
N L QA + LFE + P+ + L+ +E + M KE +K
Sbjct: 606 CNIELGEQAAKHLFE------LDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVK 658
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 267/692 (38%), Positives = 420/692 (60%), Gaps = 17/692 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++VSLL+ C + ++L + +HA + + G + +V T ++++Y KCG+ME+
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VFD + NVVSWT++I+G+ Q+ + + A F M+E+G P VT + L ACSS
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+++ G+QI ++++ D V +L S+Y+ CGSL A + F +I ++NV++W +
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I A ++ + L F +L EGI+PN T TSI +VC + SL +G VH L +K G
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+L V N+++ +++ CG + A+ LF+ M +LV+WN +IAG Q H
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ-----------HG 594
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
A F + SG+KPD TF+ +L C+ AL +G ++HAL + F DV+VGT
Sbjct: 595 KNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGT 654
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
L++MY KCG IE A +VF ++ + + SWTSMITG+A H +AL+LF M GV+P
Sbjct: 655 GLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKP 714
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ +TFVGAL+AC++AG++ E L +F+ M KE+ I+P M+HY C++D+F R G + EA +F
Sbjct: 715 DWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEF 773
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I KM EP+ +W + C+ H N+EL AA++ L+L P D + +L +I+ +AG W
Sbjct: 774 IIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMW 833
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
++VA ++ + + + + SWI + KV++F +D HPQ+ EI L+ L + +
Sbjct: 834 KEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQL 893
Query: 668 GYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY + L D +E A YHSE+LAI +GLL TP ++PI++ K+ +C DCH
Sbjct: 894 GYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTAT 953
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ +T R+II RDS R H F +G C+C DF
Sbjct: 954 KFISKITKRQIIARDSNRFHHFKDGVCSCGDF 985
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/516 (33%), Positives = 288/516 (55%), Gaps = 18/516 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K ++VS+L C + +++ ++ I+K G D FV T L+N++ KCG++ +A K
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFDNLP ++V+WTS+I+G ++ + + A ++F M E G P V + L AC+ E+
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK++HA + + + + VG ++ S+Y+ CGS+ A++ F+ ++ +NV+SWT +I
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
++G + FF+KM+ GI+PN T SI C + +L+ G Q+ I+ GY S+
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
RVR +++ +Y KCG + +A ++F+ +S N+V WNAMI + Q H
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ-----------HEQYD 496
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
AL+ F L G+KP+ TF+SIL +C +LE G+ +H L +K G SD+ V ALV
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALV 556
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+M+ CG + A +F +M R L+SW ++I GF H + A F+ M +G++P+++
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF G L AC++ + E ++ + V+ LI M+ + G IE+A K
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG-TGLISMYTKCGSIEDAHQVFHK 675
Query: 551 MDFEPNEVIWSVFIAGCRRHGN----MELGFYAAEQ 582
+ + N W+ I G +HG +EL FY +Q
Sbjct: 676 LP-KKNVYSWTSMITGYAQHGRGKEALEL-FYQMQQ 709
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 283/523 (54%), Gaps = 17/523 (3%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EA+ VL + ++ +Y +LLQ C+ K+L + E I+ HI K+G D F+
Sbjct: 91 FNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNT 150
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y KCGN A+++FD++ +V SW L+ GYVQ+ E A + M++ P
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T + L AC+ ++ G++++ ++K + D VG +L +++ CG + A K F+
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ +++++WT++I +G Q F +M EG+QP++ S+ C +L
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +VH+ ++G+ + + V +I+ +Y KCG +++A ++FD + N+V+W AMIAG AQ
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
H EA F+K+ SG++P+ TF SIL CS AL++G+QI
Sbjct: 391 -----------HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++ G+ SD V TAL++MY KCG ++ A RVF ++S + +++W +MIT + H AL
Sbjct: 440 IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
F+ +L G++PN TF L C ++ + E + + + ++ + L+ M
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSL-ELGKWVHFLIMKAGLESDLHVSNALVSM 558
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
FV G + A + M + + V W+ IAG +HG ++ F
Sbjct: 559 FVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAF 600
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 177/342 (51%), Gaps = 19/342 (5%)
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+ V+ + G+ + ++ ++ S IQ T +++ +C +L G ++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++ K G ++ + N+++ +Y KCG A+++FD M ++ +WN ++ G+ Q
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ---- 188
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
H EA + ++ +KPD TF S+L C+ +++G +++ L LK G
Sbjct: 189 -------HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ +D+ VGTAL+NM+ KCG I A++VF + TR L++WTSMITG A H QA LF+
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M GV+P++V FV L AC++ + + M KE + ++ M+ +
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKC 360
Query: 539 GCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
G +E+A FD +K N V W+ IAG +HG ++ F
Sbjct: 361 GSMEDALEVFDLVKGR----NVVSWTAMIAGFAQHGRIDEAF 398
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 154/289 (53%), Gaps = 1/289 (0%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
++L EG K +S++ S+L C + SL + +H I+K G D V LV+++ CG
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG 563
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++ A+ +F+++P+ ++VSW ++I+G+VQ+ + ++A F M E+G P +T L
Sbjct: 564 DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+S E++ G+++HA + + + D VG L S+Y+ CGS+ A + F+++ +KNV S
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
WT++I ++G + L F +M EG++P+ T S C + G
Sbjct: 684 WTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK 743
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ + ++ L+ + GL++EA + M + W A++
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 530 bits (1364), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/692 (38%), Positives = 419/692 (60%), Gaps = 17/692 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++VSLL+ C + ++L + +HA + + G + +V T ++++Y KCG+ME+
Sbjct: 306 EGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMED 365
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VFD + NVVSWT++I+G+ Q+ + + A F M+E+G P VT + L ACSS
Sbjct: 366 ALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSS 425
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+++ G+QI ++++ D V +L S+Y+ CGSL A + F +I ++NV++W +
Sbjct: 426 PSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAM 485
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I A ++ + L F +L EGI+PN T TSI +VC + SL +G VH L +K G
Sbjct: 486 ITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGL 545
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+L V N+++ +++ CG + A+ LF+ M +LV+WN +IAG Q H
Sbjct: 546 ESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQ-----------HG 594
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
A F + SG+KPD TF+ +L C+ AL +G ++HAL + F DV+VGT
Sbjct: 595 KNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGT 654
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
L++MY KCG IE A +VF ++ + + SWTSMI G+A H +AL+LF M GV+P
Sbjct: 655 GLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKP 714
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ +TFVGAL+AC++AG++ E L +F+ M KE+ I+P M+HY C++D+F R G + EA +F
Sbjct: 715 DWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEF 773
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I KM EP+ +W + C+ H N+EL AA++ L+L P D + +L +I+ +AG W
Sbjct: 774 IIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMW 833
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
++VA ++ + + + + SWI + KV++F +D HPQ+ EI L+ L + +
Sbjct: 834 KEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQL 893
Query: 668 GYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY + L D +E A YHSE+LAI +GLL TP ++PI++ K+ +C DCH
Sbjct: 894 GYVPDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTAT 953
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ +T R+II RDS R H F +G C+C DF
Sbjct: 954 KFISKITKRQIIARDSNRFHHFKDGVCSCGDF 985
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/516 (33%), Positives = 289/516 (56%), Gaps = 18/516 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K ++VS+L C + +++ ++ I+K G D FV T L+N++ KCG++ +A K
Sbjct: 208 KPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATK 267
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFDNLP ++V+WTS+I+G ++ + + A ++F M E G P V + L AC+ E+
Sbjct: 268 VFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEA 327
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK++HA + + + + VG ++ S+Y+ CGS+ A++ F+ ++ +NV+SWT +I
Sbjct: 328 LEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAG 387
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
++G + FF+KM+ GI+PN T SI C + +L+ G Q+ I+ GY S+
Sbjct: 388 FAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSD 447
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
RVR +++ +Y KCG + +A ++F+ +S N+V WNAMI + Q H
Sbjct: 448 DRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQ-----------HEQYD 496
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
AL+ F L G+KP+ TF+SIL +C +LE G+ +H L +K G SD+ V ALV
Sbjct: 497 NALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALV 556
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+M+ CG + A +F +M R L+SW ++I GF H + A F+ M +G++P+++
Sbjct: 557 SMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF G L AC++ + E ++ + V+ LI M+ + G IE+A K
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVG-TGLISMYTKCGSIEDAHQVFHK 675
Query: 551 MDFEPNEVIWSVFIAGCRRHGN----MELGFYAAEQ 582
+ + N W+ IAG +HG +EL FY +Q
Sbjct: 676 LP-KKNVYSWTSMIAGYAQHGRGKEALEL-FYQMQQ 709
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 283/523 (54%), Gaps = 17/523 (3%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EA+ VL + ++ +Y +LLQ C+ K+L + E I+ HI K+G D F+
Sbjct: 91 FNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNT 150
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y KCGN A+++FD++ +V SW L+ GYVQ+ E A + M++ P
Sbjct: 151 LINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPD 210
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T + L AC+ ++ G++++ ++K + D VG +L +++ CG + A K F+
Sbjct: 211 KRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFD 270
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ +++++WT++I +G Q F +M EG+QP++ S+ C +L
Sbjct: 271 NLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +VH+ ++G+ + + V +I+ +Y KCG +++A ++FD + N+V+W AMIAG AQ
Sbjct: 331 GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQ 390
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
H EA F+K+ SG++P+ TF SIL CS AL++G+QI
Sbjct: 391 -----------HGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHI 439
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++ G+ SD V TAL++MY KCG ++ A RVF ++S + +++W +MIT + H AL
Sbjct: 440 IEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNAL 499
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
F+ +L G++PN TF L C ++ + E + + + ++ + L+ M
Sbjct: 500 ATFQALLKEGIKPNSSTFTSILNVCKSSDSL-ELGKWVHFLIMKAGLESDLHVSNALVSM 558
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
FV G + A + M + + V W+ IAG +HG ++ F
Sbjct: 559 FVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAF 600
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 178/342 (52%), Gaps = 19/342 (5%)
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+ V+ + G+ + ++ ++ S IQ T +++ +C +L G ++
Sbjct: 73 KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++ K G ++ +RN+++ +Y KCG A+++FD M ++ +WN ++ G+ Q
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ---- 188
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
H EA + ++ +KPD TF S+L C+ +++G +++ L LK G
Sbjct: 189 -------HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAG 241
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ +D+ VGTAL+NM+ KCG I A++VF + TR L++WTSMITG A H QA LF+
Sbjct: 242 WDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQ 301
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M GV+P++V FV L AC++ + + M KE + ++ M+ +
Sbjct: 302 RMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-KEVGWDTEIYVGTAILSMYTKC 360
Query: 539 GCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
G +E+A FD +K N V W+ IAG +HG ++ F
Sbjct: 361 GSMEDALEVFDLVKGR----NVVSWTAMIAGFAQHGRIDEAF 398
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 154/289 (53%), Gaps = 1/289 (0%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
++L EG K +S++ S+L C + SL + +H I+K G D V LV+++ CG
Sbjct: 504 ALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCG 563
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++ A+ +F+++P+ ++VSW ++I+G+VQ+ + ++A F M E+G P +T L
Sbjct: 564 DLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLN 623
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+S E++ G+++HA + + + D VG L S+Y+ CGS+ A + F+++ +KNV S
Sbjct: 624 ACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYS 683
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
WT++I ++G + L F +M EG++P+ T S C + G
Sbjct: 684 WTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMK 743
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ + ++ L+ + GL++EA + M + W A++
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGA 792
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 265/705 (37%), Positives = 411/705 (58%), Gaps = 20/705 (2%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EAL +L +G +V + + LLQEC +SL +HA I+K+G + ++
Sbjct: 77 LKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENT 136
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG++ +A++VFD + N+VSWT++I +V +Q A + M AG P
Sbjct: 137 LLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPD 196
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT + L A ++ E +++G+++H + K E + VG SL +Y+ CG ++ A F+
Sbjct: 197 KVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFD 256
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ EKNV++WT +I + G+ L KM + PN+ T TSI C T L+L
Sbjct: 257 KLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEH 316
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +VH I+ GY + V N+++ +Y KCG + EA+KLF + H ++VTW AM+ G+AQ
Sbjct: 317 GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQ 376
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L H+ EA+ +F ++ G+KPD TF+S LT CS L++G+ IH
Sbjct: 377 --------LGFHD---EAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL 425
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ G+ DV + +ALV+MY KCG ++ A VF +MS R +++WT+MITG A H +AL
Sbjct: 426 VHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREAL 485
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+ FE M G++P++VTF L+AC++ G+V E +F M +Y IKP+++HY C +D+
Sbjct: 486 EYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL 545
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G +EEA + I M F+P +W ++ CR H ++E G AAE +LKL P D +Y
Sbjct: 546 LGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAY 605
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
L +I+ +AGR+ED V+ + + + + SWI + KV+ F D HP++ EI+
Sbjct: 606 VALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIY 665
Query: 655 KVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVV 709
L +L E+ K GY F L D +E V HSE+LAI +GL+ TP +PI +V
Sbjct: 666 AELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTPPGTPIRIV 725
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K I+ + REII RD+ R H FV+G C+C DF
Sbjct: 726 KNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDF 770
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 187/412 (45%), Gaps = 50/412 (12%)
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+ G + L + M+ +G + + C + SL G +VH+ +K G N
Sbjct: 73 KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ N+++ +Y KCG + +A+++FDG+ N+V+W AMI + A N EA
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMI-----------EAFVAGNQNLEA 181
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ + +G KPD TF S+L + L+ G+++H K G + VGT+LV M
Sbjct: 182 YKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGM 241
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG I +A +F ++ + +++WT +I G+A AL+L E M A V PN++T+
Sbjct: 242 YAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY 301
Query: 493 VGALAACS---------------------------NAGM-VYEALGYFEMMQKEYKIKPV 524
L C+ NA + +Y G + +K + P
Sbjct: 302 TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPH 361
Query: 525 MD--HYMCLIDMFVRLGCIEEAFDFIKKMD---FEPNEVIWSVFIAGCRRHGNMELGFYA 579
D + ++ + +LG +EA D ++M +P+++ ++ + C ++ G
Sbjct: 362 RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSI 421
Query: 580 AEQLLKLKPK-DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+QL+ D + L+ ++ G +D +V N ++SE + +W
Sbjct: 422 HQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN-----QMSERNVVAW 468
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 266/709 (37%), Positives = 420/709 (59%), Gaps = 21/709 (2%)
Query: 55 RSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R F++A ++ EG + ++VSLL+ C + ++L + +HA + + G + +
Sbjct: 283 RHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIY 342
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V T L+++Y KCG+ME+A +VF+ + NVVSWT++I+G+ Q+ + E A F M+E+G
Sbjct: 343 VGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESG 402
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P VT + L ACS +++ G+QIH ++K D V +L S+Y+ CGSL A
Sbjct: 403 IEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDAR 462
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F RI ++NV++W +I A ++ + + F +L EGI+P+ T TSI +VC +
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+L +G V SL I+ G+ S+L +RN+++ +++ CG + A LF+ M +LV+WN +IA
Sbjct: 523 ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G Q H A F + SG+KPD TF+ +L C+ AL +G ++
Sbjct: 583 GFVQ-----------HGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRL 631
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HAL + DVVVGT L++MY KCG I+ A VF + + + SWTSMITG+A H
Sbjct: 632 HALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRG 691
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL+LF M GV+P+ +TFVGAL+AC++AG++ E L +FE M K++ I+P M+HY C
Sbjct: 692 KEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGC 750
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+F R G + EA +FI KM +P+ +W + C+ H ++EL A++ L+L P D
Sbjct: 751 MVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPND 810
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
Y +L +I+ +AG W++V ++ + + + + SWI + +V+ F +D HPQ
Sbjct: 811 DGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQI 870
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
EI L L + K GY + L D +E A +HSE+LAIA+GLL TP ++P
Sbjct: 871 EEIHAELGRLHMEMKKLGYVPDTRYVLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTP 930
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I++ K+ +C DCH K+I+ +T R+II RDS R H F +G C+C DF
Sbjct: 931 IVISKNLRVCGDCHTATKLISKITKRQIIARDSNRFHHFKDGVCSCGDF 979
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 284/507 (56%), Gaps = 13/507 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ +G K ++V +L C + K++ + + I+ G D FV T L+N++ KCG
Sbjct: 196 MVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGG 255
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+++A KVF+NLPR ++++WTS+I+G ++ Q + A ++F M E G P V + L A
Sbjct: 256 VDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKA 315
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ E++ GK++HA + + + + VG +L S+Y+ CGS+ A++ FN ++ +NV+SW
Sbjct: 316 CNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSW 375
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T +I ++G + FF+KM+ GI+PN T SI C +L+ G Q+H IK
Sbjct: 376 TAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK 435
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
GY ++ RVR +++ +Y KCG + +A+ +F+ +S N+V WNAMI + Q
Sbjct: 436 AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQ---------- 485
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H A++ F L G+KPD TF+SIL +C ALE G+ + +L ++ GF SD+
Sbjct: 486 -HEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLH 544
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ ALV+M+ CG + A +F +M R L+SW ++I GF H + A F+ M +G
Sbjct: 545 IRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESG 604
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+P+Q+TF G L AC++ + E ++ E + + LI M+ + G I++A
Sbjct: 605 VKPDQITFTGLLNACASPEALTEGRRLHALI-TEAALDCDVVVGTGLISMYTKCGSIDDA 663
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + N W+ I G +HG
Sbjct: 664 HLVFHNLP-KKNVYSWTSMITGYAQHG 689
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 275/520 (52%), Gaps = 23/520 (4%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
LSV + ++ +Y SLLQ C+ K+L + E IH HI + D F+ L+++Y KC
Sbjct: 93 LSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKC 152
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
GN A+++FD +P +V SW L+ GYVQ+ + E A + M++ G P T L
Sbjct: 153 GNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYML 212
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+ +++ G ++ + ++ + D VG +L +++ CG ++ A+K FN + ++++
Sbjct: 213 NACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLI 272
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+WT++I + + Q F M EG+QP++ S+ C +L G +VH+
Sbjct: 273 TWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARM 332
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++G + + V +++ +Y KCG +++A ++F+ + N+V+W AMIAG AQ
Sbjct: 333 KEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ-------- 384
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
H EA F+K+ SG++P+ TF SIL CSR AL+QG QIH +K G+++D
Sbjct: 385 ---HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITD 441
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V TAL++MY KCG + A VF +S + +++W +MIT + H A+ F+ +L
Sbjct: 442 DRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLK 501
Query: 483 AGVRPNQVTFVGALAACSNA-----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
G++P+ TF L C + G ++L + + I+ L+ MFV
Sbjct: 502 EGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNA------LVSMFVN 555
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
G + A + M E + V W+ IAG +HG + F
Sbjct: 556 CGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHGENQFAF 594
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 16/208 (7%)
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+EA+ + ++S ++ T+SS+L +C + L GE+IH + D+ + L
Sbjct: 86 SEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNML 145
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG A ++F EM + + SW ++ G+ H +A +L E M+ GV+P++
Sbjct: 146 ISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDK 205
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEA- 544
TFV L AC++A V + F ++ + D + LI+M ++ G +++A
Sbjct: 206 YTFVYMLNACADAKNVDKGGELFSLI-----LNAGWDTDLFVGTALINMHIKCGGVDDAL 260
Query: 545 --FDFIKKMDFEPNEVIWSVFIAGCRRH 570
F+ + + D + W+ I G RH
Sbjct: 261 KVFNNLPRRDL----ITWTSMITGLARH 284
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/729 (36%), Positives = 420/729 (57%), Gaps = 25/729 (3%)
Query: 40 SGSKLIQLNGNSEPVRSL----GFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLS 91
+G + ++ NS V L +EAL ++ +G +V + + LLQEC +SL
Sbjct: 5 AGFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLE 64
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
+HA I+K+G + ++ L+++Y KCG++ +A++VFD++ N+VSWT++I +V
Sbjct: 65 QGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFV 124
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
++ A + M AG P VT + L A ++ E ++LG+++H +V+ E +
Sbjct: 125 AGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPR 184
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG SL +Y+ CG ++ A F+R+ EKNV++WT +I + G+ L M
Sbjct: 185 VGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAE 244
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ PN+ T SI C T +L G +VH I+ GY L V NS++ +Y KCG ++EA+
Sbjct: 245 VAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEAR 304
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
KLF + H ++VTW AM+ G+AQ L H+ EA+++F ++ G+KPD TF
Sbjct: 305 KLFSDLPHRDVVTWTAMVTGYAQ--------LGFHD---EAINLFRRMQQQGIKPDKMTF 353
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+S+LT CS L++G++IH + G+ DV + +ALV+MY KCG ++ AS VF +MS
Sbjct: 354 TSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSE 413
Query: 452 RTLISWTSMITG-FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R +++WT++ITG A H +AL+ F+ M G++P++VTF L+AC++ G+V E
Sbjct: 414 RNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK 473
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+F M +Y IKP+++HY C +D+ R G +EEA + I M F P +W ++ CR H
Sbjct: 474 HFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVH 533
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
++E G AAE +LKL P D +Y L I+ +AGR+ED V+ + + + + SW
Sbjct: 534 SDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSW 593
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
I + KV+ F D HP+S +I+ L +L E+ K GY F L D +E
Sbjct: 594 IEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKERILF 653
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSE+LAI +GL+ TP PI +VK+ +C DCH K I+ + REII RD++R H F
Sbjct: 654 SHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFA 713
Query: 746 NGHCTCRDF 754
+G C+C DF
Sbjct: 714 DGVCSCGDF 722
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 275/729 (37%), Positives = 417/729 (57%), Gaps = 21/729 (2%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
+ + VS+ S +Q++ E V L ++ LS G K S S++ C +
Sbjct: 220 ERNVVSWNALFSCYVQIDFCGEAV-GLFYEMVLS----GIKPNEFSLSSMVNACTGLRDS 274
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
S +IIH +++K G D F LV++Y K G++ +A VF+ + + ++VSW ++I+G
Sbjct: 275 SRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGC 334
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
V + E A+ + M +G P TL +AL AC+ + LG+Q+H+ ++K E D
Sbjct: 335 VLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDL 394
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
V L +YS C L A AFN + EK++++W +I + E ++ L F +M E
Sbjct: 395 FVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKE 454
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
GI N+ TL++I + + V QVH L +K G+ S++ V NS++ Y KC V++A
Sbjct: 455 GIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDA 514
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+++F+ + +LV++ +MI +AQ + G EAL +F ++ +KPD +
Sbjct: 515 ERIFEECTIGDLVSFTSMITAYAQ-----------YGQGEEALKLFLEMQDMELKPDRFV 563
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
SS+L C+ L A EQG+Q+H LK GF+ D+ G +LVNMY KCG I+ A R F E++
Sbjct: 564 CSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT 623
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R ++SW++MI G A H QALQLF ML GV PN +T V L AC++AG+V EA
Sbjct: 624 ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKL 683
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YFE M++ + KP+ +HY C+ID+ R G I EA + + KM FE N +W + R H
Sbjct: 684 YFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIH 743
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
++ELG AAE L L+P+ ++ +L +I+ SAG+WE+VA V+ L R+ K+ + SW
Sbjct: 744 KDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSW 803
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----V 685
I +KDKVY+F D H +S EI+ LDEL + GY +L D E +
Sbjct: 804 IEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLY 863
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
+HSEKLA+AFGL+ TP +PI V K+ +C DCH K I + +REIIVRD R H F
Sbjct: 864 HHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFK 923
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 924 DGSCSCGDY 932
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 164/523 (31%), Positives = 273/523 (52%), Gaps = 25/523 (4%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++ S+L+ C K L + +H +V +G D FV LV +Y KC ++
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+++FD +P NVVSW +L S YVQ A+ +F +M+ +G P +L + + AC+ L
Sbjct: 212 KRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGL 271
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
GK IH Y++K + D N+L +Y+ G L AI F +I++ +++SW VI
Sbjct: 272 RDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVI 331
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
C + Q L +M GI PN FTL+S C M +G Q+HS +K+
Sbjct: 332 AGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDME 391
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S+L V ++ +Y KC L+++A+ F+ + +L+ WNA+I+G++Q +
Sbjct: 392 SDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE----------- 440
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EALS+F +++ G+ + T S+IL + L + Q+H L++K+GF SD+ V +
Sbjct: 441 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 500
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++ Y KC +E A R+F E + L+S+TSMIT +A + +AL+LF +M ++P+
Sbjct: 501 LIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 560
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEY----KIKPVMDHYM--CLIDMFVRLGCIE 542
+ L AC+N L FE ++ + K V+D + L++M+ + G I+
Sbjct: 561 RFVCSSLLNACAN-------LSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSID 613
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+A ++ E V WS I G +HG+ Q+LK
Sbjct: 614 DAGRAFSELT-ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK 655
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 170/579 (29%), Positives = 274/579 (47%), Gaps = 65/579 (11%)
Query: 63 LSVLTEGPKVQTS-SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
L+++ +G TS SY LL +C KSL IHAHI K+G D + L+N+Y K
Sbjct: 44 LNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK 103
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
C N A+K+ D ++VSW++LISGY QN A+ F +M G T +
Sbjct: 104 CRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSV 163
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L ACS ++ +R+GKQ+H VV E D V N+L +Y+ C + + F+ I E+NV
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223
Query: 242 MSWTTV------IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+SW + I CGE + F +M+ GI+PNEF+L+S+ + C + G
Sbjct: 224 VSWNALFSCYVQIDFCGE------AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+H IKLGY + N+++ +Y K G + +A +F+ + ++V+WNA+IAG
Sbjct: 278 KIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG---- 333
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H +AL + ++ SG+ P+++T SS L C+ + E G Q+H+ +
Sbjct: 334 -------CVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLM 386
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K SD+ V LV+MY KC +E A F + + LI+W ++I+G++ + +AL
Sbjct: 387 KMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALS 446
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE------YKIKPVMDHY- 528
LF +M G+ NQ T L + + +V+ + K Y + ++D Y
Sbjct: 447 LFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYG 506
Query: 529 -----------------------MCLIDMFVRLGCIEEAFDF---IKKMDFEPNEVIWSV 562
+I + + G EEA ++ M+ +P+ + S
Sbjct: 507 KCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSS 566
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+ C E G +LK Y +LDIF
Sbjct: 567 LLNACANLSAFEQGKQLHVHILK--------YGFVLDIF 597
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%)
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+I + ++ P ++S +L+ C +L G QIHA K+G D + L+N+Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KC A ++ E S L+SW+++I+G+A + L AL F +M L GV+ N+ TF
Sbjct: 102 SKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 494 GALAACS 500
L ACS
Sbjct: 162 SVLKACS 168
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/703 (37%), Positives = 415/703 (59%), Gaps = 22/703 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGK 121
L +L G + ++++ C N EII+ +VKTG + D V L++++ K
Sbjct: 135 LDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 194
Query: 122 -CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
G++ A KVFD +P N+V+WT +I+ + Q AI +FLDM +G P T +
Sbjct: 195 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 254
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIR 237
L+AC+ L + LGKQ+H+ V++ D VG SL +Y+ C GS++ + K F ++
Sbjct: 255 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Query: 238 EKNVMSWTTVIGACGENGEA-VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E NVMSWT +I A ++GE + + F KM+S I+PN F+ +S+ CG + G
Sbjct: 315 EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 374
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
QV+S +KLG AS V NS++ +Y + G +++A+K FD + NLV++NA++ G+A+ +
Sbjct: 375 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 434
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
EA +F+++ +G+ +TF+S+L+ + + A+ +GEQIH LK
Sbjct: 435 K-----------SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 483
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G+ S+ + AL++MY +CG IE A +VF EM R +ISWTSMITGFA H + +AL++
Sbjct: 484 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 543
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F ML G +PN++T+V L+ACS+ GM+ E +F M KE+ I P M+HY C++D+
Sbjct: 544 FHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 603
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G + EA +FI M + ++W + CR HGN ELG +AAE +L+ +P D +Y +
Sbjct: 604 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 663
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L ++ SAG+W+DV ++ +E L + SWI ++++V+ F + HPQ+ +I++
Sbjct: 664 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQE 723
Query: 657 LDELVEKAKCFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKS 711
LD+L K K GY F L D EE + HSEK+A+AFGL++T PI + K+
Sbjct: 724 LDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKN 783
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH IK I+ T REI+VRDS R H NG C+C D+
Sbjct: 784 LRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDY 826
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 276/508 (54%), Gaps = 28/508 (5%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++Y LL+ C+ ++ +++H ++++G D V+ L+++Y KCG+ E A+ +F+
Sbjct: 45 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 104
Query: 135 LP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + ++VSW++++S + NS AI FLDMLE G YP + ACS+ +
Sbjct: 105 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 164
Query: 194 GKQIHAYVVKY-QTEDDTSVGNSLCSLY-STCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+ I+ +VVK E D VG L ++ G L SA K F+++ E+N+++WT +I
Sbjct: 165 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 224
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ G A + F M G P+ FT +S+ S C + L +G Q+HS I+LG A ++
Sbjct: 225 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 284
Query: 312 RVRNSIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
V S++ +Y KC G VD+++K+F+ M N+++W A+I + Q + K
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK-------- 336
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+ +F K+ S ++P+ ++FSS+L C L GEQ+++ +K G S VG +
Sbjct: 337 --EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 394
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY + GR+E A + F + + L+S+ +++ G+A + S +A LF ++ G+ +
Sbjct: 395 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 454
Query: 489 QVTFVGALAACSNAGMVYEALGYFE-----MMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
TF L+ ++ G A+G E +++ YK + + LI M+ R G IE
Sbjct: 455 AFTFASLLSGAASIG----AMGKGEQIHGRLLKGGYKSNQCICN--ALISMYSRCGNIEA 508
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
AF +M+ + N + W+ I G +HG
Sbjct: 509 AFQVFNEME-DRNVISWTSMITGFAKHG 535
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 215/434 (49%), Gaps = 37/434 (8%)
Query: 161 HVF--LDMLEAGNYPTNVT-LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
H F LD++ N P ++T L +C + +LGK +H +++ E D+ V N+L
Sbjct: 27 HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLI 86
Query: 218 SLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
SLYS CG +A F + +++++SW+ ++ N Q + F ML G PNE
Sbjct: 87 SLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNE 146
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLK-CGLVDEAQKLF 334
+ ++ C VG ++ +K GY +++ V ++ +++K G + A K+F
Sbjct: 147 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 206
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
D M NLVTW MI AQ + A+D A+ +F + SG PD +T+SS+
Sbjct: 207 DKMPERNLVTWTLMITRFAQ-LGCARD----------AIDLFLDMELSGYVPDRFTYSSV 255
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC---GRIERASRVFVEMST 451
L+ C+ L L G+Q+H+ ++ G DV VG +LV+MY KC G ++ + +VF +M
Sbjct: 256 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 315
Query: 452 RTLISWTSMITGFANHS-LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
++SWT++IT + +A++LF M+ +RPN +F L AC N Y
Sbjct: 316 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 375
Query: 511 YFEMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVF 563
+ Y +K + C LI M+ R G +E+ AFD + FE N V ++
Sbjct: 376 VY-----SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL----FEKNLVSYNAI 426
Query: 564 IAGCRRHGNMELGF 577
+ G ++ E F
Sbjct: 427 VDGYAKNLKSEEAF 440
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A S + PDL T+S +L C R + G+ +H +++G D VV L++
Sbjct: 28 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87
Query: 432 MYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+Y KCG E A +F M + R L+SW++M++ FAN+S+ QA+ F DML G PN+
Sbjct: 88 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR-LGCIEEAFDFIK 549
F + ACSNA + + + K ++ + LIDMFV+ G + A+
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207
Query: 550 KMDFEPNEVIWSVFIA-----GCRRHG-----NMELGFYAAEQL 583
KM E N V W++ I GC R +MEL Y ++
Sbjct: 208 KMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
++L +EA + E G + ++ SLL + ++ E IH ++K G +
Sbjct: 432 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 491
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ L+++Y +CGN+E A +VF+ + NV+SWTS+I+G+ ++ A+ +F MLE G
Sbjct: 492 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 551
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P +T L+ACS + I G K ++ ++ + L G L A
Sbjct: 552 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 611
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++ N + + + W T++GAC +G G R ++M+ E +P++
Sbjct: 612 MEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMILEQ-EPDD 657
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/703 (37%), Positives = 415/703 (59%), Gaps = 22/703 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGK 121
L +L G + ++++ C N EII+ +VKTG + D V L++++ K
Sbjct: 117 LDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 176
Query: 122 -CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
G++ A KVFD +P N+V+WT +I+ + Q AI +FLDM +G P T +
Sbjct: 177 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 236
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIR 237
L+AC+ L + LGKQ+H+ V++ D VG SL +Y+ C GS++ + K F ++
Sbjct: 237 VLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Query: 238 EKNVMSWTTVIGACGENGEA-VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E NVMSWT +I A ++GE + + F KM+S I+PN F+ +S+ CG + G
Sbjct: 297 EHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGE 356
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
QV+S +KLG AS V NS++ +Y + G +++A+K FD + NLV++NA++ G+A+ +
Sbjct: 357 QVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNL 416
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
EA +F+++ +G+ +TF+S+L+ + + A+ +GEQIH LK
Sbjct: 417 K-----------SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLK 465
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G+ S+ + AL++MY +CG IE A +VF EM R +ISWTSMITGFA H + +AL++
Sbjct: 466 GGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEM 525
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F ML G +PN++T+V L+ACS+ GM+ E +F M KE+ I P M+HY C++D+
Sbjct: 526 FHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLG 585
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G + EA +FI M + ++W + CR HGN ELG +AAE +L+ +P D +Y +
Sbjct: 586 RSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYIL 645
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L ++ SAG+W+DV ++ +E L + SWI ++++V+ F + HPQ+ +I++
Sbjct: 646 LSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQE 705
Query: 657 LDELVEKAKCFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKS 711
LD+L K K GY F L D EE + HSEK+A+AFGL++T PI + K+
Sbjct: 706 LDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKN 765
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH IK I+ T REI+VRDS R H NG C+C D+
Sbjct: 766 LRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDY 808
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 276/508 (54%), Gaps = 28/508 (5%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++Y LL+ C+ ++ +++H ++++G D V+ L+++Y KCG+ E A+ +F+
Sbjct: 27 TTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEG 86
Query: 135 LP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + ++VSW++++S + NS AI FLDMLE G YP + ACS+ +
Sbjct: 87 MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWV 146
Query: 194 GKQIHAYVVKY-QTEDDTSVGNSLCSLY-STCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+ I+ +VVK E D VG L ++ G L SA K F+++ E+N+++WT +I
Sbjct: 147 GEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRF 206
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ G A + F M G P+ FT +S+ S C + L +G Q+HS I+LG A ++
Sbjct: 207 AQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDV 266
Query: 312 RVRNSIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
V S++ +Y KC G VD+++K+F+ M N+++W A+I + Q + K
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDK-------- 318
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+ +F K+ S ++P+ ++FSS+L C L GEQ+++ +K G S VG +
Sbjct: 319 --EAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNS 376
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY + GR+E A + F + + L+S+ +++ G+A + S +A LF ++ G+ +
Sbjct: 377 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 436
Query: 489 QVTFVGALAACSNAGMVYEALGYFE-----MMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
TF L+ ++ G A+G E +++ YK + + LI M+ R G IE
Sbjct: 437 AFTFASLLSGAASIG----AMGKGEQIHGRLLKGGYKSNQCICN--ALISMYSRCGNIEA 490
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
AF +M+ + N + W+ I G +HG
Sbjct: 491 AFQVFNEME-DRNVISWTSMITGFAKHG 517
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 215/434 (49%), Gaps = 37/434 (8%)
Query: 161 HVF--LDMLEAGNYPTNVT-LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
H F LD++ N P ++T L +C + +LGK +H +++ E D+ V N+L
Sbjct: 9 HAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLI 68
Query: 218 SLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
SLYS CG +A F + +++++SW+ ++ N Q + F ML G PNE
Sbjct: 69 SLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNE 128
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLK-CGLVDEAQKLF 334
+ ++ C VG ++ +K GY +++ V ++ +++K G + A K+F
Sbjct: 129 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 188
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
D M NLVTW MI AQ + A+D A+ +F + SG PD +T+SS+
Sbjct: 189 DKMPERNLVTWTLMITRFAQ-LGCARD----------AIDLFLDMELSGYVPDRFTYSSV 237
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC---GRIERASRVFVEMST 451
L+ C+ L L G+Q+H+ ++ G DV VG +LV+MY KC G ++ + +VF +M
Sbjct: 238 LSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPE 297
Query: 452 RTLISWTSMITGFANHS-LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
++SWT++IT + +A++LF M+ +RPN +F L AC N Y
Sbjct: 298 HNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQ 357
Query: 511 YFEMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVF 563
+ Y +K + C LI M+ R G +E+ AFD + FE N V ++
Sbjct: 358 VY-----SYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL----FEKNLVSYNAI 408
Query: 564 IAGCRRHGNMELGF 577
+ G ++ E F
Sbjct: 409 VDGYAKNLKSEEAF 422
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 13/224 (5%)
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A S + PDL T+S +L C R + G+ +H +++G D VV L++
Sbjct: 10 AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69
Query: 432 MYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+Y KCG E A +F M + R L+SW++M++ FAN+S+ QA+ F DML G PN+
Sbjct: 70 LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR-LGCIEEAFDFIK 549
F + ACSNA + + + K ++ + LIDMFV+ G + A+
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 189
Query: 550 KMDFEPNEVIWSVFIA-----GCRRHG-----NMELGFYAAEQL 583
KM E N V W++ I GC R +MEL Y ++
Sbjct: 190 KMP-ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 232
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
++L +EA + E G + ++ SLL + ++ E IH ++K G +
Sbjct: 414 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 473
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ L+++Y +CGN+E A +VF+ + NV+SWTS+I+G+ ++ A+ +F MLE G
Sbjct: 474 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 533
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P +T L+ACS + I G K ++ ++ + L G L A
Sbjct: 534 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 593
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++ N + + + W T++GAC +G G R ++M+ E +P++
Sbjct: 594 MEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMILEQ-EPDD 639
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 399/697 (57%), Gaps = 16/697 (2%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
++ L G + YV +L+ C+ +K L A+ +H I+K+ Q+ VM L++VY +C
Sbjct: 17 MNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIEC 76
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G ++EA+ VFD L + + SW ++I+GYV++ E A+ +F +M G P T L
Sbjct: 77 GRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIIL 136
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+SL +++ GK++HA + E D VG +L +Y CGS+N A + F+ + +++
Sbjct: 137 KACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDII 196
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT +IGA ++G + R +M EG +PN T SI + C + +L+ +VH
Sbjct: 197 SWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHA 256
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+ G ++RV +++ +Y K G +D+A+ +FD M ++V+WN MI A+
Sbjct: 257 LDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAE-------- 308
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
H G EA +F ++ + G KPD F SIL C+ ALE ++IH L +G D
Sbjct: 309 ---HGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVD 365
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V VGTALV+MY K G I+ A VF M R ++SW +MI+G A H L AL++F M
Sbjct: 366 VRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTA 425
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
GV+P++VTFV L+ACS+AG+V E + M + Y I+P + H C++D+ R G +
Sbjct: 426 HGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLM 485
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA FI M +P+E W + CR +GN+ELG A++ LKL PK+ +Y +L +I+
Sbjct: 486 EAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYA 545
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
AG+W+ V+ V+ + RE + + SWI + +K++ F D HP+ EI + D+++E
Sbjct: 546 EAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIE 605
Query: 663 KAKCFGYKQQESF-----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
K K GY + D+E HSEKLAI +GL++TP +PI V K+ +C D
Sbjct: 606 KIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCTD 665
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH K+I+ + REIIVRD+ R H F +G C+C D+
Sbjct: 666 CHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDY 702
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 211/416 (50%), Gaps = 19/416 (4%)
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
AI V ++ L+ G + L C + + KQ+H ++K + E + V N+L
Sbjct: 12 AIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLH 71
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y CG L A F+ + +K+ SW +I E+ A +R F +M EG+QPN T
Sbjct: 72 VYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGT 131
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
I C ++ +L+ G +VH+ G S++RV +++ +Y KCG ++EA+++FD +
Sbjct: 132 YMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLM 191
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+ ++++W MI +AQ G EA + ++ G KP+ T+ SIL C
Sbjct: 192 NHDIISWTVMIGAYAQ-----------SGNGKEAYRLMLQMEQEGFKPNAITYVSILNAC 240
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ AL+ +++H L G DV VGTALV MY K G I+ A VF M R ++SW
Sbjct: 241 ASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWN 300
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK- 517
MI FA H H+A LF M G +P+ + F+ L AC++AG AL + + + +
Sbjct: 301 VMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAG----ALEWVKKIHRH 356
Query: 518 --EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ ++ + L+ M+ + G I++A +M N V W+ I+G +HG
Sbjct: 357 ALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR-NVVSWNAMISGLAQHG 411
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 23/250 (9%)
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+EA+ + G+ D + + +L C + L +Q+H +K+ + V L
Sbjct: 10 SEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNL 69
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y +CGR++ A VF + ++ SW +MI G+ H + A++LF +M GV+PN
Sbjct: 70 LHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNA 129
Query: 490 VTFVGALAACSNA-----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
T++ L AC++ G A ++ + ++ L+ M+ + G I EA
Sbjct: 130 GTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTA------LLRMYGKCGSINEA 183
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLD 599
FD + D + W+V I + GN + + Q+ + KP + +Y +L+
Sbjct: 184 RRIFDNLMNHDI----ISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKP-NAITYVSILN 238
Query: 600 IFVSAG--RW 607
S G +W
Sbjct: 239 ACASEGALKW 248
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 251/709 (35%), Positives = 405/709 (57%), Gaps = 21/709 (2%)
Query: 55 RSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R LG QEA ++ T EG + ++VS+L C + +L+ +H +++ G +
Sbjct: 123 RGLG-QEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNAT 181
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+++Y KCG++ +A++VFD + + VSWT+L Y ++ + ++ + ML+ G
Sbjct: 182 VGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEG 241
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P+ +T L+AC SL ++ GKQIHA +V+ + D V +L +Y CG++ A
Sbjct: 242 VRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAR 301
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F + ++V++W T+IG ++G+ + F +ML E + P+ T +I S C
Sbjct: 302 EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L G ++H+ +K G S++R N+++ +Y K G + +A+++FD M ++V+W A++
Sbjct: 362 GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVG 421
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G+A + E+ S F K+ G++ + T+ +L CS VAL+ G++I
Sbjct: 422 GYADCGQV-----------VESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEI 470
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA +K G +D+ V AL++MY KCG +E A RV MSTR +++W ++I G A +
Sbjct: 471 HAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRG 530
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+ALQ FE M +RPN TFV ++AC +V E F M+K+Y I P HY C
Sbjct: 531 LEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYAC 590
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G + EA D I M F+P+ +W +A CR HGN+E+G AAEQ LKL+P++
Sbjct: 591 MVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQN 650
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y L I+ +AG W DVA ++ L +E + + SWI + +V+SF D HP++
Sbjct: 651 AGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRT 710
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
EI+ L+ L ++ K GY F + D +E A +HSEKLAIA+GL++TP +P
Sbjct: 711 EEIYSELEALTKQIKSLGYVPDTRFVMHDLDQEGKERAVCHHSEKLAIAYGLISTPPETP 770
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH K I+ +T REII RD+ R H F NG C+C D+
Sbjct: 771 IRVSKNLRVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDY 819
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/576 (30%), Positives = 313/576 (54%), Gaps = 32/576 (5%)
Query: 53 PVRSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
P + G+ VL +G +V + YV LLQ CV K L+ + +H HI++ G +
Sbjct: 19 PTSTDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPN 78
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+++ L+ +Y CG++ EA+++FD +VVSW +ISGY + A ++F M +
Sbjct: 79 VYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQ 138
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P T + L+ACSS ++ G+++H V++ ++ +VGN+L S+Y+ CGS+
Sbjct: 139 EGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRD 198
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F+ + ++ +SWTT+ GA E+G A + L+ + ML EG++P+ T ++ S CG+
Sbjct: 199 ARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGS 258
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +L G Q+H+ ++ + S++RV ++ +Y+KCG V +A+++F+ + + +++ WN M
Sbjct: 259 LAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTM 318
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G ++D + + EA +F ++ + PD T+ +IL+ C+R L G+
Sbjct: 319 IGG---LVDSGQLE--------EAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGK 367
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+IHA +K G +SDV G AL+NMY K G ++ A +VF M R ++SWT+++ G+A+
Sbjct: 368 EIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCG 427
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
++ F+ ML GV N++T++ L ACSN AL + + + E +
Sbjct: 428 QVVESFSTFKKMLQQGVEANKITYMCVLKACSNP----VALKWGKEIHAEVVKAGIFADL 483
Query: 529 M---CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
L+ M+ + G +E+A + M + V W+ I G ++G G A ++
Sbjct: 484 AVANALMSMYFKCGSVEDAIRVSEGMSTR-DVVTWNTLIGGLAQNGR---GLEALQKFEV 539
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+K ++ A +SA R V+NL E +
Sbjct: 540 MKSEEMRPNATTFVNVMSACR------VRNLVEEGR 569
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/689 (37%), Positives = 415/689 (60%), Gaps = 22/689 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKC-GNMEEAQKVFDN 134
+ + + C N++++S +II ++KTG + D V L++++ K G++E A KVFD
Sbjct: 45 FTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDR 104
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P NVV+WT +I+ + Q A+ +FLDM+ +G P TL ++AC+ + + LG
Sbjct: 105 MPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLG 164
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSWTTVI-GA 250
+Q H V+K + D VG SL +Y+ C GS++ A K F+R+ NVMSWT +I G
Sbjct: 165 RQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGY 224
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G + + F +M+ ++PN FT +S+ C + + +G QV++L +K+ AS
Sbjct: 225 VQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASI 284
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V NS++ +Y +CG ++ A+K FD + NLV++N ++ +A+ ++
Sbjct: 285 NCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN-----------SE 333
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA +F+++ +G + +TF+S+L+ S + A+ +GEQIH+ LK+GF S++ + AL+
Sbjct: 334 EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALI 393
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY +CG IE A +VF EM +ISWTSMITGFA H + +AL+ F ML AGV PN+V
Sbjct: 394 SMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEV 453
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
T++ L+ACS+ G++ E L +F+ M+ E+ I P M+HY C++D+ R G +EEA + +
Sbjct: 454 TYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNS 513
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M F+ + ++ F+ CR HGNM+LG +AAE +L+ P D +Y +L ++ SAG+WE+V
Sbjct: 514 MPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEV 573
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
A ++ +E L++ SWI +++KV+ F D HPQ+ EI+ LD+L K K GY
Sbjct: 574 AEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHPQAQEIYDELDQLALKIKELGYI 633
Query: 671 QQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
F L D EE Y HSEK+A+A+G ++T PI V K+ +C DCH K
Sbjct: 634 PSTDFVLHDVEEEQKEQYLFQHSEKIAVAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYF 693
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + +EI++RD+ R H F +G C+C D+
Sbjct: 694 SIVRRKEIVLRDANRFHHFKDGTCSCNDY 722
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/443 (33%), Positives = 236/443 (53%), Gaps = 27/443 (6%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++VSW++LIS Y N + AI F DMLE G YP ACS+ E+I LGK I
Sbjct: 6 DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIF 65
Query: 199 AYVVKYQT-EDDTSVGNSLCSLY-STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+++K E D VG +L ++ G L SA K F+R+ ++NV++WT +I + G
Sbjct: 66 GFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGF 125
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ + F M+ G P+ FTL+ + S C M L +G Q H L +K G ++ V S
Sbjct: 126 SRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCS 185
Query: 317 IMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT--E 371
++ +Y KC G VD+A+K+FD M N+++W A+I G+ Q +GG E
Sbjct: 186 LVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQ------------SGGCDRE 233
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ +KP+ +TFSS+L C+ L + GEQ++AL +K S VG +L++
Sbjct: 234 AIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLIS 293
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY +CG +E A + F + + L+S+ +++ +A S +A +LF ++ AG N T
Sbjct: 294 MYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFT 353
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMC--LIDMFVRLGCIEEAFDFI 548
F L+ S+ G A+G E + K + ++C LI M+ R G IE AF
Sbjct: 354 FASLLSGASSIG----AIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVF 409
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
+M + N + W+ I G +HG
Sbjct: 410 NEMG-DGNVISWTSMITGFAKHG 431
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 178/349 (51%), Gaps = 25/349 (7%)
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++++SW+ +I N +A + + F ML G PNE+ T + C ++ +G
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 298 VHSLGIKLGY-ASNLRVRNSIMYLYLKC-GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+ +K GY S++ V +++ +++K G ++ A K+FD M N+VTW MI Q
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMIT-RFQQ 122
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ ++D A+ +F + SG PD +T S +++ C+ + L G Q H L +
Sbjct: 123 LGFSRD----------AVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVM 172
Query: 416 KTGFLSDVVVGTALVNMYKKC---GRIERASRVFVEMSTRTLISWTSMITGFANH-SLSH 471
K+G DV VG +LV+MY KC G ++ A +VF M ++SWT++ITG+
Sbjct: 173 KSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDR 232
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A++LF +M+ V+PN TF L AC+N ++ + ++ K ++ + L
Sbjct: 233 EAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVK-MRLASINCVGNSL 291
Query: 532 IDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
I M+ R G +E +AFD + FE N V ++ + + N E F
Sbjct: 292 ISMYSRCGNMENARKAFDVL----FEKNLVSYNTIVNAYAKSLNSEEAF 336
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 103/207 (49%), Gaps = 6/207 (2%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+SL +EA + E G V ++ SLL + ++ E IH+ I+K+G +
Sbjct: 328 KSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLH 387
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ L+++Y +CGN+E A +VF+ + NV+SWTS+I+G+ ++ A+ F MLEAG
Sbjct: 388 ICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAG 447
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P VT L+ACS + I G K + V++ + L G L A
Sbjct: 448 VSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEA 507
Query: 230 IKAFNRIREK-NVMSWTTVIGACGENG 255
++ N + K + + T +GAC +G
Sbjct: 508 MELVNSMPFKADALVLRTFLGACRVHG 534
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 493 bits (1270), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/711 (35%), Positives = 400/711 (56%), Gaps = 20/711 (2%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G+SE + F+ + EG +Y+++L +L + +H+HI+ G D
Sbjct: 324 GHSE----IAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESD 379
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V T LV +Y KCG+ ++ ++VF+ L ++++W ++I G + E A ++ M
Sbjct: 380 LAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQR 439
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P +T L AC + ++ G++IH+ VVK D SV N+L S+Y+ CGS+
Sbjct: 440 EGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKD 499
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A FN++ K+++SWT +IG ++G + L F M G++PN T TSI + C +
Sbjct: 500 ARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSS 559
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+L G ++H I+ G A++ V N+++ +Y CG V +A+++FD M+ ++V +NAM
Sbjct: 560 PAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAM 619
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+A AHN G EAL +F +L G+KPD T+ ++L C+ +LE +
Sbjct: 620 IGGYA-----------AHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAK 668
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+IH+L LK G+LSD +G ALV+ Y KCG A VF +M R +ISW ++I G A H
Sbjct: 669 EIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHG 728
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
LQLFE M + G++P+ VTFV L+ACS+AG++ E YF M +++ I P ++HY
Sbjct: 729 RGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHY 788
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G ++E IK M F+ N IW + CR HGN+ + AAE LKL P
Sbjct: 789 GCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDP 848
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ Y L ++ +AG W+ A ++ L + +++ SWI + DK++ F D HP
Sbjct: 849 DNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHP 908
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIV 703
+S +I+ LD+L K GY + D +E+A +HSE+LAIA+GL++T
Sbjct: 909 ESEKIYAELDKLTHAMKMEGYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPG 968
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+PI + K+ +C DCH K IT + REI+ RD R H F +G C+C D+
Sbjct: 969 TPIRIFKNLRVCPDCHTATKFITKIVDREIVARDVNRFHHFKDGVCSCGDY 1019
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/564 (30%), Positives = 299/564 (53%), Gaps = 34/564 (6%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EAL +L E G + ++ + LL C + +L IH +K D V
Sbjct: 225 IEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANC 284
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++N+Y KCG++ EA++VFD + +VVSWT +I GY E+A +F M + G P
Sbjct: 285 ILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPN 344
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T L A S +++ GK +H++++ E D +VG +L +Y+ CGS + F
Sbjct: 345 RITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFE 404
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ +++++W T+IG E G + + +M EG+ PN+ T + + C +L
Sbjct: 405 KLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHW 464
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++HS +K G+ ++ V+N+++ +Y +CG + +A+ LF+ M ++++W AMI G
Sbjct: 465 GREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGG--- 521
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LAK L G EAL++F + +G+KP+ T++SIL CS AL+ G +IH
Sbjct: 522 ---LAKSGL-----GAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV 573
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++ G +D V LVNMY CG ++ A +VF M+ R ++++ +MI G+A H+L +AL
Sbjct: 574 IEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEAL 633
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----- 529
+LF+ + G++P++VT++ L AC+N+G + A KE + D Y+
Sbjct: 634 KLFDRLQEEGLKPDKVTYINMLNACANSGSLEWA--------KEIHSLVLKDGYLSDTSL 685
Query: 530 --CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLK 585
L+ + + G +A KM + N + W+ I GC +HG + L + ++
Sbjct: 686 GNALVSTYAKCGSFSDALLVFDKM-MKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEG 744
Query: 586 LKPKDCESYAMLLDIFVSAGRWED 609
+KP D ++ LL AG E+
Sbjct: 745 IKP-DIVTFVSLLSACSHAGLLEE 767
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 301/568 (52%), Gaps = 29/568 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G +V + Y+ +L+ C+ K L +H HI++ + D + + L+N+Y +CG++EE
Sbjct: 135 QGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEE 194
Query: 128 AQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A++V++ L V SW +++ GYVQ E A+ + +M + G T L++C
Sbjct: 195 ARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSC 254
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
S ++ G++IH +K + D +V N + ++Y+ CGS++ A + F+++ K+V+SWT
Sbjct: 255 KSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWT 314
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+IG + G + F KM EG+ PN T ++ + +L+ G VHS +
Sbjct: 315 IIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNA 374
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G+ S+L V +++ +Y KCG + +++F+ + + +L+ WN MI G A+
Sbjct: 375 GHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE----------- 423
Query: 366 HNGGT--EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
GG EA I+ ++ GM P+ T+ +L C AL G +IH+ +K GF+ D+
Sbjct: 424 --GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDI 481
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V AL++MY +CG I+ A +F +M + +ISWT+MI G A L +AL +F+DM A
Sbjct: 482 SVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQA 541
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKPVMDHYMC--LIDMFVRLGC 540
G++PN+VT+ L ACS+ AL + + Q+ + D ++ L++M+ G
Sbjct: 542 GLKPNRVTYTSILNACSSPA----ALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGS 597
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAEQLLKLKPKDCESYAMLL 598
+++A +M + + V ++ I G H G L + Q LKP D +Y +L
Sbjct: 598 VKDARQVFDRMT-QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKVTYINML 655
Query: 599 DIFVSAGRWEDVAVVKNLT-REEKLSET 625
+ ++G E + +L ++ LS+T
Sbjct: 656 NACANSGSLEWAKEIHSLVLKDGYLSDT 683
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 105/214 (49%), Gaps = 8/214 (3%)
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G A+ + L G + + + +L C + L G ++H ++ + D
Sbjct: 121 GKDRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVN 180
Query: 428 ALVNMYKKCGRIERASRVFVEM--STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
AL+NMY +CG IE A +V+ ++ + RT+ SW +M+ G+ + +AL+L +M G+
Sbjct: 181 ALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGL 240
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEE 543
+ T + L++C + + E+ + K + + D + C+++M+ + G I E
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGR---EIHVEAMKARLLFDVNVANCILNMYAKCGSIHE 297
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
A + KM+ + + V W++ I G G+ E+ F
Sbjct: 298 AREVFDKMETK-SVVSWTIIIGGYADCGHSEIAF 330
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 403/703 (57%), Gaps = 20/703 (2%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EA+S+ + G + S S++ C + IH +++K G D F LV
Sbjct: 94 EAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALV 153
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y K G +E+A VFD + + ++VSW ++I+G V + A+ + +M ++G P
Sbjct: 154 DMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMF 213
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL +AL AC+ + LG+Q+H+ ++K D+ +G L +YS C S++ A F +
Sbjct: 214 TLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLM 273
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E+++++W VI +N E + F M +EGI N+ TL+++ + + +
Sbjct: 274 PERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCR 333
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+H+L +K G+ + V NS++ Y KCG V++A ++F+ V+LV + +++ +AQ
Sbjct: 334 QIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQ-- 391
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
G EAL ++ ++ G+KPD + SS+L C+ L A EQG+Q+H LK
Sbjct: 392 ---------DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILK 442
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF+SD+ G +LVNMY KCG IE AS F + R ++SW++MI G A H +ALQL
Sbjct: 443 FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQL 502
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F+ ML GV PN +T V L AC++AG+V EA YF M+ + I+P+ +HY C+ID+
Sbjct: 503 FKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLG 562
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G +E A + + KM F+ N ++W + R H N++LG AAE LL L+P+ ++ +
Sbjct: 563 RAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVL 622
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L +I+ S G W+ VA V+ L ++ K+ + SW+ +KDKVY+F D H +S EI+
Sbjct: 623 LANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAK 682
Query: 657 LDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKS 711
LDEL + K GY +L D E + +HSEKLA+AFGL+ TP +PI V K+
Sbjct: 683 LDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGLIATPPGAPIRVKKN 742
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH +K I+ + +REIIVRD+ R H F G C+C ++
Sbjct: 743 LRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEY 785
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 263/518 (50%), Gaps = 13/518 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++ S+L+ C K L + +H +V TG D FV LV +Y KCG +A
Sbjct: 5 GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD +P +VVSW +L S YV + A+ +F DM+ +G P +L + + C+ L
Sbjct: 65 RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
E G++IH Y++K + D N+L +Y+ G L A F+ I + +++SW +I
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
C + + L +M G+ PN FTL+S C M +G Q+HS IK+
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S+ + ++ +Y KC +D+A+ +F M +++ WNA+I+GH+Q +
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQ-----------NEE 293
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA S+F +++ G+ + T S++L + L A QIHAL+LK+GF D V +
Sbjct: 294 DEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNS 353
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++ Y KCG +E A+RVF E L+ +TS++T +A +AL+L+ +M G++P+
Sbjct: 354 LIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPD 413
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
L AC++ YE + ++ + L++M+ + G IE+A
Sbjct: 414 SFVCSSLLNACASLS-AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAF 472
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
++ V WS I G +HG + +Q+LK+
Sbjct: 473 SRIPVR-GIVSWSAMIGGLAQHGYGKEALQLFKQMLKV 509
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 60 QEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E ++ S+V SLL C + + + +H HI+K G D F L
Sbjct: 396 EEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSL 455
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
VN+Y KCG++E+A F +P +VSW+++I G Q+ + A+ +F ML+ G P +
Sbjct: 456 VNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNH 515
Query: 176 VTLGTALTACSSLESIRLGKQ-IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+TL + L AC+ + K ++ + + E + L G L +A++ N
Sbjct: 516 ITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVN 575
Query: 235 RIR-EKNVMSWTTVIGA 250
++ + N + W ++GA
Sbjct: 576 KMPFQANALVWGALLGA 592
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 253/688 (36%), Positives = 401/688 (58%), Gaps = 17/688 (2%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
T++ ++Q K L + +HA ++ G F+ LVN+Y KCG ++ A K+F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
D +P+ N+VSWT++ISG QNS+ AI F M G PT +A+ AC+SL SI
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
+GKQ+H +K+ + VG++L +YS CG++ A K F + K+ +SWT +I
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+ GE + L F KM+ E + ++ L S CG + + + G VHS +KLG+ S++
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N++ +Y K G ++ A +F S N+V++ +I G+ + + K
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK----------- 292
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
LS+F +L G++P+ +TFSS++ C+ ALEQG Q+HA +K F D V + LV+
Sbjct: 293 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 352
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG +E+A + F E+ T I+W S+++ F H L A+++FE M+ GV+PN +T
Sbjct: 353 MYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAIT 412
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L CS+AG+V E L YF M K Y + P +HY C+ID+ R G ++EA +FI +M
Sbjct: 413 FISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
FEPN W F+ CR HG+ E+G AAE+L+KL+PK+ + +L +I+ + +WEDV
Sbjct: 473 PFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVR 532
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-K 670
V+ R+ + + +SW+ + K + F D HP+ + I++ LD L+++ K GY
Sbjct: 533 SVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVP 592
Query: 671 QQESFELTDEESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
+ +S L ++S HSE++A+AF L++ PI PI+V K+ +C DCH+ IK I+
Sbjct: 593 RTDSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFIS 652
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T R+IIVRD+ R H F +G C+C D+
Sbjct: 653 KVTGRKIIVRDNSRFHHFTDGSCSCGDY 680
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++ LSV E G + ++ SL++ C N+ +L +HA ++K +D FV + L
Sbjct: 291 EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 350
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++YGKCG +E+A + FD + ++W SL+S + Q+ + AI +F M++ G P
Sbjct: 351 VDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 410
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T + LT CS + G ++ Y + + L G L A + N
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQG 260
R+ E N W + +GAC +G+ G
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMG 497
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
M D + ++ ++ L +G+Q+HAL + G+ + LVNMY KCG ++ A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
++F M R L+SWT+MI+G + +S +A++ F M + G P Q F A+ AC++ G
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E + ++ I + L DM+ + G + +A ++M + +EV W+
Sbjct: 121 SI-EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAM 178
Query: 564 IAGCRRHGNMELGFYAAEQLL 584
I G + G E A ++++
Sbjct: 179 IDGYSKIGEFEEALLAFKKMI 199
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/636 (39%), Positives = 383/636 (60%), Gaps = 20/636 (3%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A KVFD +P N+V+WT +I+ + Q AI +FLDM +G P T + L+AC+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSW 244
L + LGKQ+H+ V++ D VG SL +Y+ C GS++ + K F ++ E NVMSW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 245 TTVIGACGENGEA-VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
T +I A ++GE + + F KM+S I+PN F+ +S+ CG + G QV+S +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
KLG AS V NS++ +Y + G +++A+K FD + NLV++NA++ G+A+ +
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK------ 237
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA +F+++ +G+ +TF+S+L+ + + A+ +GEQIH LK G+ S+
Sbjct: 238 -----SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+ AL++MY +CG IE A +VF EM R +ISWTSMITGFA H + +AL++F ML
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 352
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G +PN++T+V L+ACS+ GM+ E +F M KE+ I P M+HY C++D+ R G + E
Sbjct: 353 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 412
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A +FI M + ++W + CR HGN ELG +AAE +L+ +P D +Y +L ++ S
Sbjct: 413 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 472
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG+W+DV ++ +E L + SWI ++++V+ F + HPQ+ +I++ LD+L K
Sbjct: 473 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 532
Query: 664 AKCFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GY F L D EE + HSEK+A+AFGL++T PI + K+ +C DC
Sbjct: 533 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 592
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H IK I+ T REI+VRDS R H NG C+C D+
Sbjct: 593 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDY 628
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 190/338 (56%), Gaps = 15/338 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC---GNMEEAQKVF 132
+Y S+L C L+ + +H+ +++ G D V LV++Y KC G++++++KVF
Sbjct: 53 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 112
Query: 133 DNLPRINVVSWTSLISGYVQNSQ-PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+ +P NV+SWT++I+ Y Q+ + + AI +F M+ P + + + L AC +L
Sbjct: 113 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 172
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+Q+++Y VK VGNSL S+Y+ G + A KAF+ + EKN++S+ ++
Sbjct: 173 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 232
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+N ++ + F+++ GI + FT S+ S ++ ++ G Q+H +K GY SN
Sbjct: 233 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 292
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ N+++ +Y +CG ++ A ++F+ M N+++W +MI G A+ H T
Sbjct: 293 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK-----------HGFATR 341
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
AL +F K+ +G KP+ T+ ++L+ CS + + +G++
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 379
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 150/278 (53%), Gaps = 2/278 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S+ S+L+ C N E ++++ VK G V L+++Y + G ME+A+K FD L
Sbjct: 158 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 217
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N+VS+ +++ GY +N + E A +F ++ + G + T + L+ +S+ ++ G+
Sbjct: 218 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 277
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIH ++K + + + N+L S+YS CG++ +A + FN + ++NV+SWT++I ++G
Sbjct: 278 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 337
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVR 314
A + L F KML G +PNE T ++ S C + + G + +S+ + G +
Sbjct: 338 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 397
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
++ L + GL+ EA + + M + + W ++
Sbjct: 398 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 435
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 8/228 (3%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
++L +EA + E G + ++ SLL + ++ E IH ++K G +
Sbjct: 234 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 293
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ L+++Y +CGN+E A +VF+ + NV+SWTS+I+G+ ++ A+ +F MLE G
Sbjct: 294 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 353
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P +T L+ACS + I G K ++ ++ + L G L A
Sbjct: 354 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 413
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++ N + + + W T++GAC +G G R ++M+ E +P++
Sbjct: 414 MEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMILEQ-EPDD 459
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/636 (39%), Positives = 383/636 (60%), Gaps = 20/636 (3%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A KVFD +P N+V+WT +I+ + Q AI +FLDM +G P T + L+AC+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSW 244
L + LGKQ+H+ V++ D VG SL +Y+ C GS++ + K F ++ E NVMSW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 245 TTVIGACGENGEA-VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
T +I A ++GE + + F KM+S I+PN F+ +S+ CG + G QV+S +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
KLG AS V NS++ +Y + G +++A+K FD + NLV++NA++ G+A+ +
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLK------ 242
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA +F+++ +G+ +TF+S+L+ + + A+ +GEQIH LK G+ S+
Sbjct: 243 -----SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+ AL++MY +CG IE A +VF EM R +ISWTSMITGFA H + +AL++F ML
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLET 357
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G +PN++T+V L+ACS+ GM+ E +F M KE+ I P M+HY C++D+ R G + E
Sbjct: 358 GTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVE 417
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A +FI M + ++W + CR HGN ELG +AAE +L+ +P D +Y +L ++ S
Sbjct: 418 AMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHAS 477
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG+W+DV ++ +E L + SWI ++++V+ F + HPQ+ +I++ LD+L K
Sbjct: 478 AGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASK 537
Query: 664 AKCFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GY F L D EE + HSEK+A+AFGL++T PI + K+ +C DC
Sbjct: 538 IKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDC 597
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H IK I+ T REI+VRDS R H NG C+C D+
Sbjct: 598 HTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDY 633
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 190/338 (56%), Gaps = 15/338 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC---GNMEEAQKVF 132
+Y S+L C L+ + +H+ +++ G D V LV++Y KC G++++++KVF
Sbjct: 58 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 117
Query: 133 DNLPRINVVSWTSLISGYVQNSQ-PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+ +P NV+SWT++I+ Y Q+ + + AI +F M+ P + + + L AC +L
Sbjct: 118 EQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDP 177
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+Q+++Y VK VGNSL S+Y+ G + A KAF+ + EKN++S+ ++
Sbjct: 178 YTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGY 237
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+N ++ + F+++ GI + FT S+ S ++ ++ G Q+H +K GY SN
Sbjct: 238 AKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQ 297
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ N+++ +Y +CG ++ A ++F+ M N+++W +MI G A+ H T
Sbjct: 298 CICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAK-----------HGFATR 346
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
AL +F K+ +G KP+ T+ ++L+ CS + + +G++
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 384
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 150/278 (53%), Gaps = 2/278 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S+ S+L+ C N E ++++ VK G V L+++Y + G ME+A+K FD L
Sbjct: 163 SFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL 222
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N+VS+ +++ GY +N + E A +F ++ + G + T + L+ +S+ ++ G+
Sbjct: 223 FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGE 282
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIH ++K + + + N+L S+YS CG++ +A + FN + ++NV+SWT++I ++G
Sbjct: 283 QIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHG 342
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVR 314
A + L F KML G +PNE T ++ S C + + G + +S+ + G +
Sbjct: 343 FATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHY 402
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
++ L + GL+ EA + + M + + W ++
Sbjct: 403 ACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 440
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 9/235 (3%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
++L +EA + E G + ++ SLL + ++ E IH ++K G +
Sbjct: 239 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 298
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ L+++Y +CGN+E A +VF+ + NV+SWTS+I+G+ ++ A+ +F MLE G
Sbjct: 299 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 358
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P +T L+ACS + I G K ++ ++ + L G L A
Sbjct: 359 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 418
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKML--SEGIQPNEFTLTS 281
++ N + + + W T++GAC +G G R ++M+ E P + L S
Sbjct: 419 MEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMILEQEPDDPAAYILLS 472
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/694 (34%), Positives = 398/694 (57%), Gaps = 18/694 (2%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG K +++ LL C N + S+ ++IH I+++G + + L+N+Y +CG++
Sbjct: 479 SEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIM 538
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
EAQ VF+ +++SW S+I+G+ Q+ E A +FL+M + G P +T + L C
Sbjct: 539 EAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCK 598
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ E++ LG+QIH +++ + D ++GN+L ++Y CGSL A + F+ +R +NVMSWT
Sbjct: 599 NPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTA 658
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG + GE + F +M ++G +P + T +SI C + L G +V + + G
Sbjct: 659 MIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y + V N+++ Y K G + +A+K+FD M + ++++WN MIAG+AQ
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQ------------ 766
Query: 367 NG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG G AL ++ G+ + ++F SIL CS ALE+G+++HA +K DV V
Sbjct: 767 NGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRV 826
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
G AL++MY KCG +E A VF + + +++W +MI +A H L+ +AL F M G+
Sbjct: 827 GAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGI 886
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+P+ TF L+AC+++G+V E F ++ ++ + P ++HY CL+ + R G +EA
Sbjct: 887 KPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAE 946
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I +M F P+ +W + CR HGN+ L +AA LKL ++ Y +L +++ +AG
Sbjct: 947 TLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAG 1006
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
RW+DVA ++ + + + SWI + + ++ F D HP++AEI++ L L + +
Sbjct: 1007 RWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEME 1066
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY + L + +E++ HSE+LAIA+GLL TP +PI + K+ +C DCH
Sbjct: 1067 RAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHT 1126
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ L REII RDS R H F NG C+C DF
Sbjct: 1127 ASKFISKLVGREIIARDSNRFHTFKNGKCSCEDF 1160
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 276/506 (54%), Gaps = 19/506 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++YV L+Q C ++SL+ A+ IHA +V+ G D F+ L+N+Y KC ++ +A +VF
Sbjct: 83 AAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLK 142
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+PR +V+SW SLIS Y Q + A +F +M AG P+ +T + LTAC S + G
Sbjct: 143 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K+IH+ +++ + D V NSL ++Y C L SA + F+ I ++V+S+ T++G +
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + F +M SEGI P++ T ++ T L G ++H L + G S++RV
Sbjct: 263 AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVG 322
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++ ++++CG V A++ + + ++V +NA+IA AQ H EA
Sbjct: 323 TALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQ-----------HGHYEEAFE 371
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ ++ S G+ + T+ S+L CS AL GE IH+ + G SDV +G +L++MY
Sbjct: 372 QYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYA 431
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
+CG + RA +F M R LISW ++I G+A +A++L++ M GV+P +VTF+
Sbjct: 432 RCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLH 491
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKM 551
L+AC+N+ + E + + IK L++M+ R G I EA F+ +
Sbjct: 492 LLSACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGF 577
D + W+ IAG +HG+ E +
Sbjct: 551 DI----ISWNSMIAGHAQHGSYEAAY 572
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 281/532 (52%), Gaps = 15/532 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F++ + ++G + ++Y+S+L C K+L E+IH+HI + G D + L+++
Sbjct: 370 FEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISM 429
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y +CG++ A+++F+ +P+ +++SW ++I+GY + A+ ++ M G P VT
Sbjct: 430 YARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTF 489
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L+AC++ + GK IH +++ + + + N+L ++Y CGS+ A F R
Sbjct: 490 LHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRA 549
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++++SW ++I ++G + F +M EG++P++ T S+ C +L +G Q+
Sbjct: 550 RDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQI 609
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H L I+ G ++ + N+++ +Y++CG + +A ++F + H N+++W AMI G A D
Sbjct: 610 HMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFA---DQ 666
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+D +A +F ++ + G KP TFSSIL C L++G+++ A L +G
Sbjct: 667 GED--------RKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSG 718
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ D VG AL++ Y K G + A +VF +M R ++SW MI G+A + L ALQ
Sbjct: 719 YELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAY 778
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M GV N+ +FV L ACS+ + E + K K++ + LI M+ +
Sbjct: 779 QMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKR-KMQGDVRVGAALISMYAKC 837
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLKP 588
G +EEA + E N V W+ I +HG + L F+ +KP
Sbjct: 838 GSLEEAQEVFDNFT-EKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKP 888
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/508 (29%), Positives = 258/508 (50%), Gaps = 19/508 (3%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG +Y++LL L + IH V G + D V T L ++ +CG++
Sbjct: 277 SEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVA 336
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++ + +VV + +LI+ Q+ E A + M G T + L ACS
Sbjct: 337 GAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACS 396
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ +++ G+ IH+++ + D +GNSL S+Y+ CG L A + FN + +++++SW
Sbjct: 397 TSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNA 456
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I + + ++ + +M SEG++P T + S C + G +H ++ G
Sbjct: 457 IIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSG 516
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
SN + N++M +Y +CG + EAQ +F+G ++++WN+MIAGHAQ H
Sbjct: 517 IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQ-----------H 565
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
A +F ++ G++PD TF+S+L C ALE G QIH L +++G DV +G
Sbjct: 566 GSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLG 625
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+NMY +CG ++ A VF + R ++SWT+MI GFA+ +A +LF M G +
Sbjct: 626 NALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFK 685
Query: 487 PNQVTFVGALAACSNAGMVYEALGYF-EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
P + TF L AC ++ + E ++ Y++ + + LI + + G + +A
Sbjct: 686 PVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDAR 743
Query: 546 DFIKKMDFEPNEVI--WSVFIAGCRRHG 571
KM PN I W+ IAG ++G
Sbjct: 744 KVFDKM---PNRDIMSWNKMIAGYAQNG 768
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 210/388 (54%), Gaps = 12/388 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + EG + ++ S+L C N ++L IH I+++G D + L+N+Y +C
Sbjct: 576 LEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRC 635
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++++A +VF +L NV+SWT++I G+ + A +F M G P T + L
Sbjct: 636 GSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSIL 695
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC S + GK++ A+++ E DT VGN+L S YS GS+ A K F+++ +++M
Sbjct: 696 KACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIM 755
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +I +NG L+F +M +G+ N+F+ SI + C + +L G +VH+
Sbjct: 756 SWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEI 815
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+K ++RV +++ +Y KCG ++EAQ++FD + N+VTWNAMI +AQ
Sbjct: 816 VKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQ-------- 867
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLS 421
H ++AL F+ ++ G+KPD TF+SIL+ C+ + +G +I +L + G
Sbjct: 868 ---HGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSP 924
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEM 449
+ LV + + GR + A + +M
Sbjct: 925 TIEHYGCLVGLLGRAGRFQEAETLINQM 952
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 158/330 (47%), Gaps = 31/330 (9%)
Query: 268 LSEGIQP-----NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
LS QP N + C SL ++H+ ++ G ++ + N ++ +Y+
Sbjct: 69 LSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYV 128
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
KC V +A ++F M ++++WN++I+ +AQ K A +F ++ ++
Sbjct: 129 KCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKK-----------AFQLFEEMQTA 177
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G P T+ SILT C LE G++IH+ ++ G+ D V +L+NMY KC + A
Sbjct: 178 GFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSA 237
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+VF + R ++S+ +M+ +A + + + LF M G+ P++VT++ L A +
Sbjct: 238 RQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTP 297
Query: 503 GMVYEA-----LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
M+ E L E + + ++ L MFVR G + A ++ + +
Sbjct: 298 SMLDEGKRIHKLAVNEGLNSDIRVGTA------LATMFVRCGDVAGAKQALEAFA-DRDV 350
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
V+++ IA +HG+ E F EQ +++
Sbjct: 351 VVYNALIAALAQHGHYEEAF---EQYYQMR 377
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 252/692 (36%), Positives = 389/692 (56%), Gaps = 16/692 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +Y+S+L + +L + +H+ I+ G D V T LV +Y KCG+ ++
Sbjct: 221 EGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKD 280
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
++VF+ L ++++W ++I G + E A V+ M G P +T L AC +
Sbjct: 281 CRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVN 340
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ GK+IH+ V K D V N+L S+YS CGS+ A F+++ K+V+SWT +
Sbjct: 341 SAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAM 400
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG ++G + L + +M G++PN T TSI + C + +L G ++H ++ G
Sbjct: 401 IGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGL 460
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
A++ V N+++ +Y CG V +A+++FD M ++V +NAMI G+A AHN
Sbjct: 461 ATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYA-----------AHN 509
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EAL +F +L G+KPD T+ ++L C+ +LE +IH L K GF SD VG
Sbjct: 510 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGN 569
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV+ Y KCG AS VF +M+ R +ISW ++I G A H ALQLFE M + GV+P
Sbjct: 570 ALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKP 629
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTFV L+ACS+AG++ E YF M +++ I P ++HY C++D+ R G ++EA
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEAL 689
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
IK M F+ N IW + CR HGN+ + AAE LKL + Y L ++ +AG W
Sbjct: 690 IKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMW 749
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ A ++ L + +++ SWI++ DK++ F D HPQS +I+ LD L K
Sbjct: 750 DSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMK 809
Query: 668 GYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY + D +E+A +HSE+LAIA+GL++TP + I + K+ +C DCH
Sbjct: 810 GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTAT 869
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + REII RD R H F +G C+C D+
Sbjct: 870 KFISKIVDREIIARDVNRFHHFKDGVCSCGDY 901
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 304/559 (54%), Gaps = 24/559 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++AL +L + G ++ +S L C + +L IH ++ G D V
Sbjct: 107 IEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANC 166
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++N+Y KCG++EEA++VFD + + +VVSWT I GY + E A +F M + G P
Sbjct: 167 ILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPN 226
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T + L A SS +++ GK +H+ ++ E DT+VG +L +Y+ CGS + F
Sbjct: 227 RITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFE 286
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ +++++W T+IG E G + +++M EG+ PN+ T + + C +L
Sbjct: 287 KLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHW 346
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++HS K G+ S++ V+N+++ +Y +CG + +A+ +FD M ++++W AMI G
Sbjct: 347 GKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGG--- 403
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LAK G EAL+++ ++ +G++P+ T++SIL CS ALE G +IH
Sbjct: 404 ---LAKSGF-----GAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV 455
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++ G +D VG LVNMY CG ++ A +VF M R ++++ +MI G+A H+L +AL
Sbjct: 456 VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEAL 515
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE--YKIKPVMDHYMCLI 532
+LF+ + G++P++VT++ L AC+N+G + A +++K + V + L+
Sbjct: 516 KLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGN---ALV 572
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKD 590
+ + G +A +KM + N + W+ I G +HG + L + ++ +KP D
Sbjct: 573 STYAKCGSFSDASIVFEKMT-KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKP-D 630
Query: 591 CESYAMLLDIFVSAGRWED 609
++ LL AG E+
Sbjct: 631 IVTFVSLLSACSHAGLLEE 649
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/561 (29%), Positives = 295/561 (52%), Gaps = 28/561 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G +V +S Y+ +L+ C+ K L +H HI++ + D + + L+N+Y +CG++EE
Sbjct: 17 QGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEE 76
Query: 128 AQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A++V+ L + V SW +++ GY+Q E A+ + M + G P T+ + L++C
Sbjct: 77 ARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSC 136
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
S ++ G++IH ++ D V N + ++Y+ CGS+ A + F+++ +K+V+SWT
Sbjct: 137 KSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWT 196
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
IG + G + F KM EG+ PN T S+ + + +L+ G VHS +
Sbjct: 197 ITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNA 256
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G+ S+ V +++ +Y KCG + +++F+ + + +L+ WN MI G A+
Sbjct: 257 GHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE----------- 305
Query: 366 HNGG--TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
GG EA +++++ G+ P+ T+ +L C AL G++IH+ K GF SD+
Sbjct: 306 --GGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDI 363
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V AL++MY +CG I+ A VF +M + +ISWT+MI G A +AL ++++M A
Sbjct: 364 GVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQA 423
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMM-QKEYKIKPVMDHYM--CLIDMFVRLGC 540
GV PN+VT+ L ACS+ AL + + Q+ + D ++ L++M+ G
Sbjct: 424 GVEPNRVTYTSILNACSSPA----ALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGS 479
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAEQLLKLKPKDCESYAMLL 598
+++A +M + + V ++ I G H G L + Q LKP D +Y +L
Sbjct: 480 VKDARQVFDRM-IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKP-DKVTYINML 537
Query: 599 DIFVSAGRWEDVAVVKNLTRE 619
+ ++G E + L R+
Sbjct: 538 NACANSGSLEWAREIHTLVRK 558
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 10/211 (4%)
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ + L G + + + +L C + L G Q+H ++ + D AL+N
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 432 MYKKCGRIERASRVFVEMS--TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
MY +CG IE A +V+ ++S RT+ SW +M+ G+ + +AL+L M G+ P++
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 490 VTFVGALAACSNAGMV-YEALGYFEMMQKE--YKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
T + L++C + G + + +F+ MQ + +K C+++M+ + G IEEA +
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVA----NCILNMYAKCGSIEEARE 182
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
KM+ + + V W++ I G G E F
Sbjct: 183 VFDKME-KKSVVSWTITIGGYADCGRSETAF 212
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/680 (36%), Positives = 390/680 (57%), Gaps = 16/680 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L C + IH ++K G D F LV++Y K G +E A VF ++ +
Sbjct: 189 ILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPD 248
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSW ++I+G V + +LA+ + +M +G P TL +AL AC+++ LG+Q+H+
Sbjct: 249 VVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHS 308
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
++K D L +YS C ++ A +A++ + +K++++W +I + G+ +
Sbjct: 309 SLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLD 368
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
+ FSKM SE I N+ TL+++ ++ +++V Q+H++ IK G S+ V NS++
Sbjct: 369 AVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLD 428
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
Y KC +DEA K+F+ + +LV + +MI ++Q D G EAL ++ ++
Sbjct: 429 TYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGD-----------GEEALKLYLQM 477
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ +KPD + SS+L C+ L A EQG+Q+H +K GF+ D+ +LVNMY KCG I
Sbjct: 478 QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSI 537
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E A R F E+ R ++SW++MI G+A H +AL+LF ML GV PN +T V L AC
Sbjct: 538 EDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCAC 597
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
++AG+V E YFE M+ + IKP +HY C+ID+ R G + EA + + + FE + +
Sbjct: 598 NHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFV 657
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + R H N+ELG AA+ L L+P+ ++ +L +I+ SAG WE+VA V+ ++
Sbjct: 658 WGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKD 717
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-- 677
K+ + SWI IKDKVY+F D H +S EI+ LD+L + GY ++
Sbjct: 718 SKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLSKAGYSSIVEIDIHN 777
Query: 678 ---TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
+++E +HSEKLA+AFGL+ TP PI V K+ +C DCH F K + + +REII
Sbjct: 778 VDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREII 837
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
VRD R H F +G C+C D+
Sbjct: 838 VRDINRFHHFKDGSCSCGDY 857
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 179/593 (30%), Positives = 301/593 (50%), Gaps = 50/593 (8%)
Query: 18 SRQPS--SSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVR--SL-------GF-QEALSV 65
SR PS + L TL K Y R KL+ + + V SL GF +EAL V
Sbjct: 13 SRDPSLRNHLVTLYSKCRRFGYAR---KLVDESSELDVVSWSSLLSGYVQNGFVEEALLV 69
Query: 66 LTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
E G K ++ S+L+ C ++ L+ +H V TG D FV LV +Y K
Sbjct: 70 FNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAK 129
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG +++++++F + NVVSW +L S YVQ+ A+ +F +M+ +G P ++
Sbjct: 130 CGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISII 189
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC+ L+ LG++IH ++K + D N+L +YS G + A+ F I +V
Sbjct: 190 LNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDV 249
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW +I C + L +M G +PN FTL+S C M +G Q+HS
Sbjct: 250 VSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSS 309
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK+ S+L ++ +Y KC ++D+A++ +D M +++ WNA+I+G++Q D
Sbjct: 310 LIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGD---- 365
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+A+S+FSK+ S + + T S++L + L A++ +QIH +++K+G S
Sbjct: 366 -------HLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYS 418
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D V +L++ Y KC I+ AS++F E + L+++TSMIT ++ + +AL+L+ M
Sbjct: 419 DFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQ 478
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC-------LIDM 534
A ++P+ L AC+N L +E K+ + + +MC L++M
Sbjct: 479 DADIKPDPFICSSLLNACAN-------LSAYE-QGKQLHVHAIKFGFMCDIFASNSLVNM 530
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVI--WSVFIAGCRRHGNMELGFYAAEQLLK 585
+ + G IE+A ++ PN I WS I G +HG+ + Q+L+
Sbjct: 531 YAKCGSIEDADRAFSEI---PNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLR 580
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 252/497 (50%), Gaps = 19/497 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HAH++K G +D + LV +Y KC A+K+ D ++VVSW+SL+SGYVQN
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ VF +M G T + L ACS + +G+++H V E D V N+
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ CG L+ + + F I E+NV+SW + ++ + + F +M+ GI PN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
EF+++ I + C + +G ++H L +K+G + N+++ +Y K G ++ A +F
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
++H ++V+WNA+IAG H+ AL + ++ SG +P+++T SS L
Sbjct: 243 DIAHPDVVSWNAIIAG-----------CVLHDCNDLALMLLDEMKGSGTRPNMFTLSSAL 291
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ + E G Q+H+ +K SD+ LV+MY KC ++ A R + M + +I
Sbjct: 292 KACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDII 351
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN--AGMVYEALGYFE 513
+W ++I+G++ A+ LF M + NQ T L + ++ A V + +
Sbjct: 352 AWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTIS 411
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+ Y V++ L+D + + I+EA ++ +E + V ++ I ++G+
Sbjct: 412 IKSGIYSDFYVINS---LLDTYGKCNHIDEASKIFEERTWE-DLVAYTSMITAYSQYGDG 467
Query: 574 E--LGFYAAEQLLKLKP 588
E L Y Q +KP
Sbjct: 468 EEALKLYLQMQDADIKP 484
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 118/386 (30%), Positives = 207/386 (53%), Gaps = 31/386 (8%)
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++HA+++K+ D S+ N L +LYS C A K + E +V+SW++++ +NG
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L F++M G++ NEFT S+ C L +G +VH + + G+ S+ V N
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCGL+D++++LF G+ N+V+WNA+ + + Q +L EA+ +
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQ------SELCG-----EAVGL 170
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ SG+ P+ ++ S IL C+ L + G +IH L LK G D ALV+MY K
Sbjct: 171 FKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSK 230
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
G IE A VF +++ ++SW ++I G H + AL L ++M +G RPN T A
Sbjct: 231 AGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSA 290
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY------MCLIDMFVRLGCIEE---AFD 546
L AC+ A+G+ E+ ++ + MD + + L+DM+ + +++ A+D
Sbjct: 291 LKACA-------AMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYD 343
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ K D + W+ I+G + G+
Sbjct: 344 SMPKKDI----IAWNALISGYSQCGD 365
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 185/352 (52%), Gaps = 15/352 (4%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL +L E G + + S L+ C +H+ ++K +H D F LV+
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KC M++A++ +D++P+ ++++W +LISGY Q A+ +F M T
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTT 387
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L T L + +SL++I++ KQIH +K D V NSL Y C ++ A K F
Sbjct: 388 LSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERT 447
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++++++T++I A + G+ + L+ + +M I+P+ F +S+ + C + + G Q
Sbjct: 448 WEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQ 507
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H IK G+ ++ NS++ +Y KCG +++A + F + + +V+W+AMI G+AQ
Sbjct: 508 LHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQ--- 564
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
H G EAL +F+++ G+ P+ T S+L C+ + +G+Q
Sbjct: 565 --------HGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQ 608
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 253/695 (36%), Positives = 401/695 (57%), Gaps = 16/695 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++ G S ++L C + + +H +++K G D F L+++Y K G
Sbjct: 179 MISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGC 238
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
E A VF +P+ ++VSW ++I+G V + + +LA+ + M P+ TL +AL A
Sbjct: 239 PEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKA 298
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+++ ++LG+Q+H+ ++K E D+ VG L +YS CG L A F+ + K+V+ W
Sbjct: 299 CAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVW 358
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I G ++ + F+ M EG++ N+ TL++I + QVH++ IK
Sbjct: 359 NSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIK 418
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
GY + V NS++ Y KC L+++A K+F+ +LV + +MI ++Q
Sbjct: 419 SGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQ---------- 468
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+ G EAL ++ ++ +KPD + FSS+ C+ L A EQG+QIH LK G LSDV
Sbjct: 469 -YGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVF 527
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
G +LVNMY KCG I+ AS +F E+S R ++SW++MI G A H +ALQLF ML G
Sbjct: 528 AGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNG 587
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ PN +T V L+AC++AG+V EA +F +M+K + I P +HY C++D+ R+G ++EA
Sbjct: 588 ILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEA 647
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+K+M F+ + +W + R H N+ELG +AAE LL L+P+ ++ +L +I+ S
Sbjct: 648 MVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYAST 707
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
G W++VA V+ + + + SWI +KDKVY+F D HP+S EI+ LD+L E+
Sbjct: 708 GMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERL 767
Query: 665 KCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
GY +L D +E +HSEKLA+AFGL+ TP +PI V K+ +C DCH
Sbjct: 768 TSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCH 827
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + +REIIVRD R H F +G C+C D+
Sbjct: 828 TAFKFISKVASREIIVRDINRFHHFRDGSCSCGDY 862
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 265/557 (47%), Gaps = 72/557 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y LL + K +S+ IHA I++ G + LVN+Y KC A+K+ +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLGLLG---LRNRLVNLYSKCQCFRVARKLVIDSS 109
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDM------------------------------ 166
++VSW++LISGYVQN + E A+ + +M
Sbjct: 110 EPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQ 169
Query: 167 ----------LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+ G P +L T L AC+ LE G ++H Y++K + D N+L
Sbjct: 170 IHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANAL 229
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+Y+ G +AI F I + +++SW VI C + + L+ KM S + P+
Sbjct: 230 LDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
FTL+S C + +++G Q+HS +K+ + V ++ +Y KCGL+ +A+ +FD
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSI 394
M +++ WN++I+G++ N G EA+S+F+ + G++ + T S+I
Sbjct: 350 MPXKDVIVWNSIISGYS-------------NCGYDIEAMSLFTNMYKEGLEFNQTTLSTI 396
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L + A EQ+H +++K+G+ D V +L++ Y KC +E A++VF L
Sbjct: 397 LKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDL 456
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+++TSMIT ++ + L +AL+++ M ++P+ F AC+N L +E
Sbjct: 457 VAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACAN-------LSAYEQ 509
Query: 515 MQKEY----KIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
++ + K + D + L++M+ + G I++A ++ + V WS I G
Sbjct: 510 GKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMIGGLA 568
Query: 569 RHGNMELGFYAAEQLLK 585
+HG+ Q+LK
Sbjct: 569 QHGHGRKALQLFYQMLK 585
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 251/688 (36%), Positives = 396/688 (57%), Gaps = 17/688 (2%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
T++ ++Q K L + +HA ++ G F+ LVN+Y KCG ++ A K+F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
D +P+ N+VSWT++ISG QNS+ AI F M G PT +A+ AC+SL SI
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
+GKQ+H +K+ + VG++L +YS CG++ A K F + K+ +SWT +I
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+ GE + L F KM+ E + ++ L S CG + + + G VHS +KLG+ S++
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N++ +Y K G ++ A +F S N+V++ +I G+ + + K
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK----------- 292
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
LS+F +L G++P+ +TFSS++ C+ ALEQG Q+HA +K F D V + LV+
Sbjct: 293 GLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVD 352
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG +E A + F E+ T I+W S+++ F H L A++ FE M+ GV+PN +T
Sbjct: 353 MYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAIT 412
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L CS+AG+V E L YF M K Y + P +HY C+ID+ R G ++EA +FI +M
Sbjct: 413 FISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 472
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
FEPN W F+ CR HG+ E+G AAE+L+KL+PK+ + +L +I+ + +WEDV
Sbjct: 473 PFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVR 532
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-- 669
V+ R+ + + +SW+ + K + F D H + + I++ LD L+++ K GY
Sbjct: 533 SVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVP 592
Query: 670 -KQQESFELTD--EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
++ D +E HSE++A+AF L++ PI PI+V K+ +C DCH+ IK I+
Sbjct: 593 XTDSVPLDMDDXMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFIS 652
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T R+IIVRD+ R H F +G C+C D+
Sbjct: 653 KVTGRKIIVRDNSRFHHFTDGSCSCGDY 680
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++ LSV E G + ++ SL++ C N+ +L +HA ++K +D FV + L
Sbjct: 291 EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 350
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++YGKCG +E A + FD + ++W SL+S + Q+ + AI F M++ G P
Sbjct: 351 VDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNA 410
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T + LT CS + G ++ Y + + L G L A + N
Sbjct: 411 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 470
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQG 260
R+ E N W + +GAC +G+ G
Sbjct: 471 RMPFEPNAFGWCSFLGACRIHGDKEMG 497
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
M D + ++ ++ L +G+Q+HAL + G+ + LVNMY KCG ++ A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
++F M R L+SWT+MI+G + +S +A++ F M + G P Q F A+ AC++ G
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E + ++ I + L DM+ + G + +A ++M + +EV W+
Sbjct: 121 SI-EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAM 178
Query: 564 IAGCRRHGNMELGFYAAEQLL 584
I G + G E A ++++
Sbjct: 179 IDGYSKIGEFEEALLAFKKMI 199
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 420/713 (58%), Gaps = 25/713 (3%)
Query: 56 SLGFQEALS---VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFV 111
++GF+ L+ ++ G + + + C + +S + I ++KTG Q D V
Sbjct: 147 NMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCV 206
Query: 112 MTFLVNVYGKC-GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
L++++ K G++ A KVF+ +P N V+WT +I+ +Q AI +FLDM+ +G
Sbjct: 207 GCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSG 266
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLN 227
P TL ++AC+++E + LG+Q+H+ +++ D VG L ++Y+ C GS+
Sbjct: 267 YEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMC 326
Query: 228 SAIKAFNRIREKNVMSWTTVI-GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+A K F++I + NV SWT +I G + G + L F M+ + PN FT +S C
Sbjct: 327 AARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKAC 386
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ +LR+G QV + +KLG++S V NS++ +Y + G +D+A+K FD + NL+++N
Sbjct: 387 ANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYN 446
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+I +A+ ++ EAL +F+++ GM +TF+S+L+ + + + +
Sbjct: 447 TVIDAYAKNLN-----------SEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK 495
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
GEQIHA +K+G + V AL++MY +CG IE A +VF +M R +ISWTS+ITGFA
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H + QAL+LF ML GVRPN+VT++ L+ACS+ G+V E +F+ M E+ + P M+
Sbjct: 556 HGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRME 615
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C++D+ R G + EA FI M ++ + ++W F+ CR HGN+ELG +AA+ +++
Sbjct: 616 HYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQ 675
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P D +Y +L +++ S +W++V+ ++ +E+ L + SW+ +++KV+ F D
Sbjct: 676 EPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFYVGDTS 735
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTP 701
HP++AEI+ L L K K GY F L D +E HSEK+A+AFGL++T
Sbjct: 736 HPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTS 795
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ PI V K+ +C DCH+ IK I+ T REIIVRD+ R H +G C+C ++
Sbjct: 796 KMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEY 848
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 158/539 (29%), Positives = 274/539 (50%), Gaps = 28/539 (5%)
Query: 43 KLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK 102
+LIQ N +++ E + P +QT Y L++C+ +S ++H + +
Sbjct: 37 RLIQEINNGRLHKAISTLEHMVHQGSHPDLQT--YSLFLKKCIRTRSFDIGTLVHEKLTQ 94
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNSQPELAIH 161
+ D + L+++Y KCG E+A +F + +++SW++++S + N+ A+
Sbjct: 95 SDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLY 220
F+DM+E G YP A ACS+ E + +G I +V+K + D VG L ++
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMF 214
Query: 221 STC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
G L SA K F ++ E+N ++WT +I + G A + + F M+ G +P+ FTL
Sbjct: 215 VKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTL 274
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC---GLVDEAQKLFDG 336
+ + S C M L +G Q+HS I+ G + V ++ +Y KC G + A+K+FD
Sbjct: 275 SGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSI 394
+ N+ +W AMI G+ Q GG EAL +F + + + P+ +TFSS
Sbjct: 335 ILDHNVFSWTAMITGYVQ------------KGGYDEEALDLFRGMILTHVIPNHFTFSST 382
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L C+ L AL GEQ+ +K GF S V +L++MY + GRI+ A + F + + L
Sbjct: 383 LKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNL 442
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
IS+ ++I +A + S +AL+LF ++ G+ + TF L+ ++ G + + ++
Sbjct: 443 ISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE---QI 499
Query: 515 MQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ K ++ +C LI M+ R G IE AF + M+ + N + W+ I G +HG
Sbjct: 500 HARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 239/694 (34%), Positives = 393/694 (56%), Gaps = 18/694 (2%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG K +++ LL C N + ++ ++IH I+++G + + L+N+Y +CG++
Sbjct: 424 SEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLM 483
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
EAQ VF+ +V+SW S+I+G+ Q+ E A +F +M P N+T + L+ C
Sbjct: 484 EAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCK 543
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ E++ LGKQIH + + + D ++GN+L ++Y CGSL A F+ ++ ++VMSWT
Sbjct: 544 NPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTA 603
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG C + GE ++ + F +M +EG +P + T +SI VC + L G +V + + G
Sbjct: 604 MIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSG 663
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y + V N+++ Y K G + +A+++FD M ++V+WN +IAG+AQ
Sbjct: 664 YELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQ------------ 711
Query: 367 NG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG G A+ ++ + P+ ++F S+L CS ALE+G+++HA +K DV V
Sbjct: 712 NGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRV 771
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
G AL++MY KCG A VF + + +++W +MI +A H L+ +AL F M G+
Sbjct: 772 GAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGI 831
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+P+ TF L+AC++AG+V E F M+ EY + P ++HY CL+ + R +EA
Sbjct: 832 KPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAE 891
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I +M F P+ +W + CR HGN+ L +AA LKL ++ Y +L +++ +AG
Sbjct: 892 TLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAG 951
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
RW+DVA ++ + + + SWI + + ++ F D HP++AEI+ L L + +
Sbjct: 952 RWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEME 1011
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY L D +E++ HSE+LAIA+GL+ TP +PI + K+ +C DCH
Sbjct: 1012 EAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHT 1071
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ L REII RDS R H F NG C+C D+
Sbjct: 1072 ASKFISKLVGREIIARDSNRFHSFKNGKCSCEDY 1105
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 279/508 (54%), Gaps = 15/508 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ + ++YV+LLQ C ++ L A+ IHA +V+ D F+ L+N+Y KC ++ +A +
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF +PR +V+SW SLIS Y Q + A +F +M AG P +T + LTAC S
Sbjct: 84 VFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAE 143
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK+IH+ ++K + D V NSL S+Y CG L A + F I ++V+S+ T++G
Sbjct: 144 LENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGL 203
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ + L F +M SEGI P++ T ++ T L G ++H L ++ G S+
Sbjct: 204 YAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD 263
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+RV +++ + ++CG VD A++ F G + ++V +NA+IA AQ H
Sbjct: 264 IRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQ-----------HGHNV 312
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA + ++ S G+ + T+ SIL CS ALE G+ IH+ + G SDV +G AL+
Sbjct: 313 EAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALI 372
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY +CG + +A +F M R LISW ++I G+A +A++L++ M GV+P +V
Sbjct: 373 SMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRV 432
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+ L+AC+N+ + E + + IK L++M+ R G + EA + +
Sbjct: 433 TFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEG 491
Query: 551 MDFEPNEVI-WSVFIAGCRRHGNMELGF 577
+ +VI W+ IAG +HG+ E +
Sbjct: 492 T--QARDVISWNSMIAGHAQHGSYETAY 517
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/552 (27%), Positives = 291/552 (52%), Gaps = 22/552 (3%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F++ + ++G + ++Y+S+L C K+L ++IH+HI + G D + L+++
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM 374
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y +CG++ +A+++F +P+ +++SW ++I+GY + A+ ++ M G P VT
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTF 434
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L+AC++ + GK IH +++ + + + N+L ++Y CGSL A F +
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V+SW ++I ++G + F +M +E ++P+ T S+ S C +L +G Q+
Sbjct: 495 RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H + G ++ + N+++ +Y++CG + +A+ +F + H ++++W AMI G A D
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA---DQ 611
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+D +A+ +F ++ + G +P TFSSIL +C+ L++G+++ A L +G
Sbjct: 612 GED--------MKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSG 663
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ D VG AL++ Y K G + A VF +M +R ++SW +I G+A + L A++
Sbjct: 664 YELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAY 723
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M V PN+ +FV L ACS+ + E + K K++ + LI M+ +
Sbjct: 724 QMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKR-KLQGDVRVGAALISMYAKC 782
Query: 539 GC---IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCES 593
G +E FD I E N V W+ I +HG + LGF+ + +KP D +
Sbjct: 783 GSQGEAQEVFDNI----IEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKP-DGST 837
Query: 594 YAMLLDIFVSAG 605
+ +L AG
Sbjct: 838 FTSILSACNHAG 849
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 169/604 (27%), Positives = 297/604 (49%), Gaps = 34/604 (5%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG +Y++LL L + IH V+ G + D V T LV + +CG+++
Sbjct: 222 SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVD 281
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++ F +VV + +LI+ Q+ A + M G T + L ACS
Sbjct: 282 SAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACS 341
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ +++ GK IH+++ + D +GN+L S+Y+ CG L A + F + +++++SW
Sbjct: 342 TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNA 401
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I + + +R + +M SEG++P T + S C + G +H ++ G
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
SN + N++M +Y +CG + EAQ +F+G ++++WN+MIAGHAQ H
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ-----------H 510
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
A +F ++ + ++PD TF+S+L+ C ALE G+QIH ++G DV +G
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+NMY +CG ++ A VF + R ++SWT+MI G A+ +A++LF M G R
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 487 PNQVTFVGALAACSNAGMVYEA---LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
P + TF L C+++ + E + Y ++ Y++ + + LI + + G + +
Sbjct: 631 PVKSTFSSILKVCTSSACLDEGKKVIAY--ILNSGYELDTGVGN--ALISAYSKSGSMTD 686
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE----SYAMLLD 599
A + KM + V W+ IAG ++G LG A E +++ +D S+ LL+
Sbjct: 687 AREVFDKMPSR-DIVSWNKIIAGYAQNG---LGQTAVEFAYQMQEQDVVPNKFSFVSLLN 742
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
S E+ V + KL +R+ + S G ++ E+F D
Sbjct: 743 ACSSFSALEEGKRVHAEIVKRKLQGD-----VRVGAALISMYAKCGSQGEAQEVF---DN 794
Query: 660 LVEK 663
++EK
Sbjct: 795 IIEK 798
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/694 (35%), Positives = 402/694 (57%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG K ++ ++L ++ +H ++K+G FV +VN+Y K + +
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD++ N VSW S+I+G+V N A +F M G T T + C++
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCAN 306
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTT 246
++ + KQ+H V+K ++ D ++ +L YS C ++ A K F + +NV+SWT
Sbjct: 307 IKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTA 366
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I +NG + + F +M EG++PN FT ++I + + +Q+H+L +K
Sbjct: 367 IISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTN 422
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y ++ V ++ Y K G +EA K+F+ + ++V W+AM++G+AQM D+
Sbjct: 423 YENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEG------ 476
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
A+ IF +L G++P+ +TFSS+L C+ A +EQG+Q H+ ++K+GF + + V
Sbjct: 477 -----AVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCV 531
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+ALV MY K G IE A+ VF R L+SW SMI+G+A H ++L++FE+M +
Sbjct: 532 SSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNL 591
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ +TF+G ++AC++AG+V E YF++M K+Y I P M+HY C++D++ R G +E+A
Sbjct: 592 ELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAM 651
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
D I KM F IW +A CR H N++LG AAE+L+ L+P+D +Y +L +I+ +AG
Sbjct: 652 DLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAG 711
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
W++ A V+ L +K+ + +SWI +K+K +SF D HPQS I+ L+EL + K
Sbjct: 712 NWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLK 771
Query: 666 CFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY + L D EE V HSE+LAIAFGL+ TP +PI +VK+ +C DCH
Sbjct: 772 DAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHT 831
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK+I+ + R+I+VRDS R H F G C+C D+
Sbjct: 832 VIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDY 865
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/482 (29%), Positives = 250/482 (51%), Gaps = 27/482 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G +D V T LV++Y K ++E+ ++VFD + NVVSWTSL++GY QN
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ +F M G P T L ++ ++ G Q+H V+K + VGNS
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS 233
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ ++YS ++ A F+ + +N +SW ++I NG ++ F +M EG++
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLT 293
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ ++ +C + + Q+H IK G +L ++ ++M Y KC +D+A KLF
Sbjct: 294 QTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFC 353
Query: 336 GMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
M V N+V+W A+I+G+ Q NG T+ A+++F ++ G++P+ +T+S+
Sbjct: 354 MMHGVQNVVSWTAIISGYVQ------------NGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
ILT + + QIHAL +KT + + VGTAL + Y K G A+++F + +
Sbjct: 402 ILTANAAV----SPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKD 457
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+++W++M++G+A A+++F + GV PN+ TF L AC+ E F
Sbjct: 458 IVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFH 517
Query: 514 MMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
IK + +C L+ M+ + G IE A + K+ + + V W+ I+G +
Sbjct: 518 ----SCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKR-QVDRDLVSWNSMISGYAQ 572
Query: 570 HG 571
HG
Sbjct: 573 HG 574
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/449 (29%), Positives = 236/449 (52%), Gaps = 20/449 (4%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+Q++FD P+ + L+ + +N Q + A+++FL + +G+ +L L C
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L +GKQ+H +K +D SVG SL +Y S+ + F+ +R KNV+SWT++
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ +NG Q L+ FS+M EGI+PN FT ++ ++ G QVH++ IK G
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH-AQMMDLAKDDLSAH 366
S + V NS++ +Y K +V +A+ +FD M + N V+WN+MIAG +DL
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDL-------- 276
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA +F ++ G+K F++++ +C+ + + +Q+H +K G D+ +
Sbjct: 277 ----EAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIK 332
Query: 427 TALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
TAL+ Y KC I+ A ++F M + ++SWT++I+G+ + + +A+ LF M GV
Sbjct: 333 TALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGV 392
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
RPN T+ L A NA + + +++ Y+ P + L D + ++G EA
Sbjct: 393 RPNHFTYSTILTA--NAAVSPSQIHAL-VVKTNYENSPSVG--TALSDSYSKIGDANEAA 447
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ +D E + V WS ++G + G++E
Sbjct: 448 KIFELID-EKDIVAWSAMLSGYAQMGDIE 475
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 419/713 (58%), Gaps = 25/713 (3%)
Query: 56 SLGFQEALS---VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFV 111
++GF+ L+ ++ G + + + C + +S + I +VKTG Q D V
Sbjct: 147 NMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCV 206
Query: 112 MTFLVNVYGKC-GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
L++++ K G++ A KVF+ +P N V+WT +I+ +Q AI +FL+M+ +G
Sbjct: 207 GCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSG 266
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLN 227
P TL ++AC+++E + LG+Q+H+ +++ D VG L ++Y+ C GS+
Sbjct: 267 YEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMC 326
Query: 228 SAIKAFNRIREKNVMSWTTVI-GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+A K F++I + NV SWT +I G + G + L F M+ + PN FT +S C
Sbjct: 327 AARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKAC 386
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ +LR+G QV + +KLG++S V NS++ +Y + G +D+A+K FD + NL+++N
Sbjct: 387 ANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYN 446
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+I +A+ ++ EAL +F+++ GM +TF+S+L+ + + + +
Sbjct: 447 TVIDAYAKNLN-----------SEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGK 495
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
GEQIHA +K+G + V AL++MY +CG IE A +VF +M R +ISWTS+ITGFA
Sbjct: 496 GEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAK 555
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H + QAL+LF ML GVRPN VT++ L+ACS+ G+V E +F+ M E+ + P M+
Sbjct: 556 HGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRME 615
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C++D+ R G + EA FI M ++ + ++W F+ CR HGN+ELG +AA+ +++
Sbjct: 616 HYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQ 675
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P D +Y +L +++ S +W++V+ ++ +E+ L + SW+ +++KV+ F D
Sbjct: 676 EPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFYVGDTS 735
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTP 701
HP++AEI+ L L K K GY F L D +E HSEK+A+AFGL++T
Sbjct: 736 HPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLFQHSEKIAVAFGLISTS 795
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ PI V K+ +C DCH+ IK I+ T REIIVRD+ R H +G C+C ++
Sbjct: 796 KMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEY 848
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 159/539 (29%), Positives = 275/539 (51%), Gaps = 28/539 (5%)
Query: 43 KLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK 102
+LIQ N +++ E + P +QT Y L++C+ +S ++H + +
Sbjct: 37 RLIQEINNGRLHKAISTLEHMVHQGSHPDLQT--YSLFLKKCIRTRSFDIGTLVHEKLTQ 94
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNSQPELAIH 161
+ D + L+++Y KCG E+A +F + +++SW++++S + N+ A+
Sbjct: 95 SDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALL 154
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLY 220
F+DM+E G YP A ACS+ E + +G I +VVK + D VG L ++
Sbjct: 155 TFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMF 214
Query: 221 STC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
G L SA K F ++ E+N ++WT +I + G A + + F +M+ G +P+ FTL
Sbjct: 215 VKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTL 274
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC---GLVDEAQKLFDG 336
+ + S C M L +G Q+HS I+ G + V ++ +Y KC G + A+K+FD
Sbjct: 275 SGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQ 334
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSI 394
+ N+ +W AMI G+ Q GG EAL +F + + + P+ +TFSS
Sbjct: 335 ILDHNVFSWTAMITGYVQ------------KGGYDEEALDLFRGMILTHVIPNHFTFSST 382
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L C+ L AL GEQ+ +K GF S V +L++MY + GRI+ A + F + + L
Sbjct: 383 LKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNL 442
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
IS+ ++I +A + S +AL+LF ++ G+ + TF L+ ++ G + + ++
Sbjct: 443 ISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGE---QI 499
Query: 515 MQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ K ++ +C LI M+ R G IE AF + M+ + N + W+ I G +HG
Sbjct: 500 HARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME-DRNVISWTSIITGFAKHG 557
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/691 (37%), Positives = 389/691 (56%), Gaps = 43/691 (6%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K S S++ C + S +IIH +++K G D F LV++Y K G++ +A
Sbjct: 253 GIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADA 312
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF+ + + ++VSW ++I+G V + E A+ + LG
Sbjct: 313 ISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL---------------LG--------- 348
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ +Q+H+ ++K E D V L +YS C L A AFN + EK++++W +I
Sbjct: 349 ---QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAII 405
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ E ++ L F +M EGI N+ TL++I + + V QVH L +K G+
Sbjct: 406 SGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFH 465
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S++ V NS++ Y KC V++A+++F+ + +LV++ +MI +AQ +
Sbjct: 466 SDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQ-----------YGQ 514
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
G EAL +F ++ +KPD + SS+L C+ L A EQG+Q+H LK GF+ D+ G +
Sbjct: 515 GEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 574
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LVNMY KCG I+ A R F E++ R ++SW++MI G A H QALQLF ML GV PN
Sbjct: 575 LVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPN 634
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+T V L AC++AG+V EA YFE M++ + KP+ +HY C+ID+ R G I EA + +
Sbjct: 635 HITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELV 694
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
KM FE N +W + R H ++ELG AAE L L+P+ ++ +L +I+ SAG+WE
Sbjct: 695 NKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWE 754
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+VA V+ L R+ K+ + SWI +KDKVY+F D H +S EI+ LDEL + G
Sbjct: 755 NVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAG 814
Query: 669 YKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y +L D E + +HSEKLA+AFGL+ TP +PI V K+ +C DCH K
Sbjct: 815 YVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFK 874
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I + +REIIVRD R H F +G C+C D+
Sbjct: 875 YICKIVSREIIVRDINRFHHFKDGSCSCGDY 905
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 177/593 (29%), Positives = 286/593 (48%), Gaps = 78/593 (13%)
Query: 63 LSVLTEGPKVQTS-SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
L+++ +G TS SY LL +C KSL IHAHI K+G D + L+N+Y K
Sbjct: 44 LNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSK 103
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
C A+K+ D ++VSW++LISGY QN A+ F +M G T +
Sbjct: 104 CRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSV 163
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L ACS ++ +R+GKQ+H VV E D V N+L +Y+ C + + F+ I E+NV
Sbjct: 164 LKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNV 223
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW + + + + F +M+ GI+PNEF+L+S+ + C + G +H
Sbjct: 224 VSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGY 283
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG---------- 351
IKLGY + N+++ +Y K G + +A +F+ + ++V+WNA+IAG
Sbjct: 284 LIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQA 343
Query: 352 -----------HAQMM---------------------DLAKD-----------DLSAHNG 368
H+ +M DL +D DL A N
Sbjct: 344 LELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNA 403
Query: 369 ----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
EALS+F +++ G+ + T S+IL + L + Q+H L++K+G
Sbjct: 404 IISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSG 463
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F SD+ V +L++ Y KC +E A R+F E + L+S+TSMIT +A + +AL+LF
Sbjct: 464 FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFL 523
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY----KIKPVMDHYM--CLI 532
+M ++P++ L AC+N L FE ++ + K V+D + L+
Sbjct: 524 EMQDMELKPDRFVCSSLLNACAN-------LSAFEQGKQLHVHILKYGFVLDIFAGNSLV 576
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+M+ + G I++A ++ E V WS I G +HG+ Q+LK
Sbjct: 577 NMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLK 628
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%)
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+I + ++ P ++S +L+ C +L G QIHA K+G D + L+N+Y
Sbjct: 42 AILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLY 101
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KC A ++ E S L+SW+++I+G+A + L AL F +M L GV+ N+ TF
Sbjct: 102 SKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFS 161
Query: 494 GALAACS 500
L ACS
Sbjct: 162 SVLKACS 168
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 480 bits (1236), Expect = e-132, Method: Compositional matrix adjust.
Identities = 237/691 (34%), Positives = 398/691 (57%), Gaps = 16/691 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + +++ C + K+L +IH + K G D FV LV++Y KC +E+A
Sbjct: 25 GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA 84
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD + ++V+WT +I GY + + ++ +F M E G P V + T + AC+ L
Sbjct: 85 RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 144
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ + I Y+ + + + D +G ++ +Y+ CG + SA + F+R+ EKNV+SW+ +I
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A G +G+ + L F MLS G+ P++ TL S+ C + +L++G +H + K G
Sbjct: 205 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLD 264
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V +++ +Y KC +++A+ LFD M +LVTW MI G+A+
Sbjct: 265 LDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAEC-----------GN 313
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
E+L +F K+ G+ PD +++ C++L A+ + I + F DV++GTA
Sbjct: 314 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 373
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
+++M+ KCG +E A +F M + +ISW++MI + H +AL LF ML +G+ PN
Sbjct: 374 MIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPN 433
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++T V L ACS+AG+V E L +F +M ++Y ++ + HY C++D+ R G ++EA I
Sbjct: 434 KITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLI 493
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M E +E +W F+ CR H ++ L AA LL+L+P++ Y +L +I+ +AGRWE
Sbjct: 494 ESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWE 553
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DVA ++L + +L + W+WI + +K + F D HP+S EI+++L L K + G
Sbjct: 554 DVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVG 613
Query: 669 YKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y +F L D +E + HSEKLAIAFGL+ TP +PI ++K+ +C DCH F K
Sbjct: 614 YVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCK 673
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+++++T R IIVRD+ R H F G C+C D+
Sbjct: 674 LVSAITGRVIIVRDANRFHHFKEGACSCGDY 704
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 130/428 (30%), Positives = 228/428 (53%), Gaps = 15/428 (3%)
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
++ G+ + F +++ G P N TL + AC L+++++G+ IH V K+
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D V +L +Y C + A F++++E+++++WT +IG E G+A + L F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
KM EG+ P++ + ++ C + ++ + + + ++ + +++ +Y KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
V+ A+++FD M N+++W+AMIA + H G +AL +F + SSGM
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGY-----------HGQGRKALDLFRMMLSSGML 229
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
PD T +S+L CS L L+ G IH + K G D V ALV+MY KC IE A +
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 289
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F +M R L++WT MI G+A ++++L LF+ M GV P++V V + AC+ G +
Sbjct: 290 FDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 349
Query: 506 YEALGYFEMMQ-KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
++A + +Q K++++ ++ M IDM + GC+E A + +M+ E N + WS I
Sbjct: 350 HKARTIDDYIQRKKFQLDVILGTAM--IDMHAKCGCVESAREIFDRME-EKNVISWSAMI 406
Query: 565 AGCRRHGN 572
A HG
Sbjct: 407 AAYGYHGQ 414
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 204/385 (52%), Gaps = 12/385 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + V+++ C ++ A II +I + D + T ++++Y KCG +E
Sbjct: 125 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 184
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD + NV+SW+++I+ Y + Q A+ +F ML +G P +TL + L ACS
Sbjct: 185 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSD 244
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L+++++G+ IH V K+ + D V +L +Y C + A F+++ E+++++WT +
Sbjct: 245 LKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVM 304
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG E G A + L F KM EG+ P++ + ++ C + ++ + + +
Sbjct: 305 IGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF 364
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ + +++ ++ KCG V+ A+++FD M N+++W+AMIA + H
Sbjct: 365 QLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY-----------HG 413
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVG 426
G +AL +F + SG+ P+ T S+L CS +E+G + +L + +DV
Sbjct: 414 QGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHY 473
Query: 427 TALVNMYKKCGRIERASRVFVEMST 451
T +V++ + GR++ A ++ M+
Sbjct: 474 TCVVDLLGRAGRLDEALKLIESMTV 498
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 148/275 (53%), Gaps = 1/275 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L+ G + SLL C + K+L +IH + K G D FV LV++YGKC
Sbjct: 223 MLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE 282
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A+ +FD +P ++V+WT +I GY + ++ +F M E G P V + T + A
Sbjct: 283 IEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFA 342
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L ++ + I Y+ + + + D +G ++ +++ CG + SA + F+R+ EKNV+SW
Sbjct: 343 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 402
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I A G +G+ + L F ML GI PN+ TL S+ C + G + SL +
Sbjct: 403 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE 462
Query: 305 -LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
++++ ++ L + G +DEA KL + M+
Sbjct: 463 DYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 497
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/697 (35%), Positives = 395/697 (56%), Gaps = 18/697 (2%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ + ++ Y LLQ C L IH I+ G + FVMT ++++Y KC
Sbjct: 134 LRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC 193
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
++ A K+F+ + ++VSWT+L++GY QN + A+ + L M EAG P +VTL + L
Sbjct: 194 RQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSIL 253
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
A + ++++R+G+ IH Y + E +V N+L +Y CGS A F +R K V+
Sbjct: 254 PAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVV 313
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW T+I C +NGE+ + F KML EG P T+ + C + L G VH L
Sbjct: 314 SWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLL 373
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
KL SN+ V NS++ +Y KC VD A +F+ + N VTWNAMI G+AQ
Sbjct: 374 DKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQ-------- 424
Query: 363 LSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG EAL++F + S G+K D +T ++T + Q + IH L ++ +
Sbjct: 425 ----NGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDN 480
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V V TALV+MY KCG I+ A ++F M R +I+W +MI G+ H + + L LF +M
Sbjct: 481 NVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQ 540
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
V+PN +TF+ ++ACS++G V E L F+ MQ++Y ++P MDHY ++D+ R G +
Sbjct: 541 KGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQL 600
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
++A++FI++M +P + + C+ H N+ELG AA++L KL P + + +L +I+
Sbjct: 601 DDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIY 660
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S W+ VA V+ ++ L +T SW+ +++++++F HP+S +I+ L+ L
Sbjct: 661 ASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLG 720
Query: 662 EKAKCFGY-KQQESFELTDEESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
++ K GY +S +E+ HSE+LAIAFGLLNT + + + K+ +C D
Sbjct: 721 DEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGD 780
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH+ K I+ +T REIIVRD +R H F NG C+C D+
Sbjct: 781 CHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDY 817
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/457 (29%), Positives = 225/457 (49%), Gaps = 20/457 (4%)
Query: 10 AACTLETKSRQPSSSLATLKDKNHT--VSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLT 67
A +L K RQ ++ + H VS+ + Q NG+++ R+L Q L +
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQ-NGHAK--RAL--QLVLQMQE 239
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
G K + + VS+L + K+L IH + ++G V L+++Y KCG+
Sbjct: 240 AGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARI 299
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + VVSW ++I G QN + E A FL ML+ G PT VT+ L AC++
Sbjct: 300 ARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACAN 359
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + G +H + K + + + SV NSL S+YS C ++ A FN + + NV +W +
Sbjct: 360 LGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAM 418
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L F M S+GI+ + FTL + + R +H L ++
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+N+ V +++ +Y KCG + A+KLFD M +++TWNAMI G+ H
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYG-----------THG 527
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG- 426
G E L +F+++ +KP+ TF S+++ CS +E+G + + +L +
Sbjct: 528 VGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHY 587
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+A+V++ + G+++ A EM + IS + G
Sbjct: 588 SAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLG 624
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 183/377 (48%), Gaps = 16/377 (4%)
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QI +++K ++ + SL+ GS + A + F + K + + ++ +N
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNS 124
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
L FF +M+ + ++ + +CG L L+ G ++H L I G+ SNL V
Sbjct: 125 SLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMT 184
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
++M LY KC +D A K+F+ M H +LV+W ++AG+AQ NG AL
Sbjct: 185 AVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQ------------NGHAKRALQ 232
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ ++ +G KPD T SIL + + AL G IH ++GF S V V AL++MY
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYF 292
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG A VF M ++T++SW +MI G A + S +A F ML G P +VT +G
Sbjct: 293 KCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC+N G + +++ K K+ + LI M+ + ++ A + E
Sbjct: 353 VLLACANLGDLERGWFVHKLLDK-LKLDSNVSVMNSLISMYSKCKRVDIAASIFN--NLE 409
Query: 555 PNEVIWSVFIAGCRRHG 571
V W+ I G ++G
Sbjct: 410 KTNVTWNAMILGYAQNG 426
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 142/286 (49%), Gaps = 23/286 (8%)
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL---VTWNAMIAGHA 353
Q+ IK G+ + + ++ L+ K G EA ++F+ HV L V ++ M+ G+A
Sbjct: 65 QILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFE---HVELKLDVLYHIMLKGYA 121
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ L +AL F ++ ++ + ++ +L +C + L++G +IH L
Sbjct: 122 KNSSLG-----------DALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGL 170
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ GF S++ V TA++++Y KC +I+ A ++F M + L+SWT+++ G+A + + +A
Sbjct: 171 IITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRA 230
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSN--AGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
LQL M AG +P+ VT V L A ++ A + ++ + + V + L
Sbjct: 231 LQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTN---AL 287
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
+DM+ + G A K M V W+ I GC ++G E F
Sbjct: 288 LDMYFKCGSARIARLVFKGMR-SKTVVSWNTMIDGCAQNGESEEAF 332
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 395/690 (57%), Gaps = 19/690 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V +Y LL+ C + L + IH ++ +G + F MT +VN+Y KC + +A
Sbjct: 28 PVVYNFTY--LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAY 85
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P ++V W ++ISGY QN ++A+ + L M E G+ P ++T+ + L A +
Sbjct: 86 NMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTR 145
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+R+G +H YV++ E +V +L +YS CGS++ A F+ + + V+SW ++I
Sbjct: 146 LLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMID 205
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
++G+A + F KML EG+QP T+ C + L G VH L +L S
Sbjct: 206 GYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDS 265
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V NS++ +Y KC VD A +F + + LV+WNAMI G+AQ NG
Sbjct: 266 DVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQ------------NGC 313
Query: 370 T-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL+ F ++ S +KPD +T S++ + L Q + IH L ++ +V V TA
Sbjct: 314 VNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTA 373
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG I A ++F M+ R +I+W +MI G+ H L +++LF++M ++PN
Sbjct: 374 LVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPN 433
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+TF+ AL+ACS++G+V E L +FE M+K+Y I+P MDHY ++D+ R G + +A+DFI
Sbjct: 434 DITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFI 493
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+KM +P ++ + C+ H N++LG AA ++ KL P D + +L +I+ +A W
Sbjct: 494 QKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWG 553
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
VA V+ + + L +T S + I ++V+SF HPQS +I+ L+ LV++ + G
Sbjct: 554 KVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAG 613
Query: 669 YKQQESFELTDEESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
Y + E+ V HSEKLAIAFGLLNT +PI + K+ +C DCHN K
Sbjct: 614 YVPDTNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGTPIHIRKNLRVCGDCHNATKY 673
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REIIVRD R H F +G C+C D+
Sbjct: 674 ISLVTGREIIVRDMHRFHLFKDGVCSCGDY 703
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 201/390 (51%), Gaps = 12/390 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + + + VS+L + + L +H ++++ G V T LV++Y KCG++
Sbjct: 125 EGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSI 184
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ +FD + VVSW S+I GYVQ+ E A+ +F ML+ G PTNVT+ AL AC+
Sbjct: 185 ARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACAD 244
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + GK +H V + + + D SV NSL S+YS C ++ A F +R K ++SW +
Sbjct: 245 LGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAM 304
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L F +M S I+P+ FT+ S+ + R +H L I+
Sbjct: 305 ILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFL 364
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N+ V +++ +Y KCG + A+KLFD M+ +++TWNAMI G+ H
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYG-----------THG 413
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVG 426
G ++ +F ++ +KP+ TF L+ CS +E+G ++ G +
Sbjct: 414 LGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHY 473
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLIS 456
A+V++ + GR+ +A +M + I+
Sbjct: 474 GAMVDLLGRAGRLNQAWDFIQKMPIKPGIT 503
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 215/447 (48%), Gaps = 15/447 (3%)
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
++ GY ++S + A+ F M P L C ++ GK+IH V+
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ + ++Y+ C +N A F+R+ E++++ W T+I +NG A L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M EG +P+ T+ SI LR+G VH ++ G+ S + V +++ +Y KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
V A+ +FDGM H +V+WN+MI G+ Q D A+ IF K+ G++
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGD-----------AEGAMLIFQKMLDEGVQ 229
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P T L C+ L LE+G+ +H L + SDV V +L++MY KC R++ A+ +
Sbjct: 230 PTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADI 289
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + +TL+SW +MI G+A + ++AL F +M ++P+ T V + A + +
Sbjct: 290 FKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIP 349
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+A ++ + + K V L+DM+ + G I A M+ + + W+ I
Sbjct: 350 RQAKWIHGLVIRRFLDKNVF-VMTALVDMYAKCGAIHTARKLFDMMNAR-HVITWNAMID 407
Query: 566 GCRRHGNMELGFYAAEQLLK--LKPKD 590
G HG + +++ K +KP D
Sbjct: 408 GYGTHGLGKTSVELFKEMKKGTIKPND 434
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 20/340 (5%)
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L FFS+M + ++P + T + +CG L+ G ++H I G++ NL ++ +
Sbjct: 15 LSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNM 74
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKL 379
Y KC +++A +FD M +LV WN MI+G+AQ NG + AL + ++
Sbjct: 75 YAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQ------------NGFAKVALMLVLRM 122
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ G +PD T SIL + L G +H L+ GF S V V TALV+MY KCG +
Sbjct: 123 SEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSV 182
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
A +F M RT++SW SMI G+ + A+ +F+ ML GV+P VT +GAL AC
Sbjct: 183 SIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHAC 242
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
++ G + E + + + K+ + LI M+ + ++ A D K + V
Sbjct: 243 ADLGDL-ERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLR-NKTLVS 300
Query: 560 WSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAML 597
W+ I G ++G N L + Q +KP +S+ M+
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKP---DSFTMV 337
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 245/687 (35%), Positives = 400/687 (58%), Gaps = 23/687 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L+ C+N L AE +H + +K G D FV LVN+Y KCG M +A+ +FD + +
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 248
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC--SSLESIRLGKQI 197
VV W ++ GYVQ + A +F + +G P ++ L C + + + LGKQ+
Sbjct: 249 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQV 308
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H VK + D SV NSL ++YS G A + FN ++ +++SW ++I +C ++
Sbjct: 309 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 368
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSIS-----SVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+ + F +L EG++P+ FTL SI+ CG ++ L G Q+H+ IK G+ S+L
Sbjct: 369 EESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 428
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V + I+ +Y+KCG + A +F+ +S + V W +MI+G +D +D +A
Sbjct: 429 VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG---CVDNGNED--------QA 477
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L I+ ++ S + PD YTF++++ S + ALEQG Q+HA +K +SD VGT+LV+M
Sbjct: 478 LRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDM 537
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG IE A R+F +M+ R + W +M+ G A H + +A+ LF+ M G+ P++V+F
Sbjct: 538 YAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSF 597
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+G L+ACS+AG+ EA Y M +Y I+P ++HY CL+D R G ++EA I+ M
Sbjct: 598 IGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMP 657
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
F+ + I + CR G++E G A +L L+P D +Y +L +I+ +A RW+DV
Sbjct: 658 FKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTD 717
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
+ + + + + + +SWI +K+ ++ F +D HPQ+ I+ ++E+++ + GY
Sbjct: 718 ARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPD 777
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
F L D +E + YHSEKLAIA+GL++TP + I V+K+ +C DCHN IK I+
Sbjct: 778 TEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISK 837
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI++RD+ R H F +G C+C D+
Sbjct: 838 VFEREIVLRDANRFHHFRDGVCSCGDY 864
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/510 (30%), Positives = 272/510 (53%), Gaps = 31/510 (6%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ ++ +L + HA IV +GS D F+ L+ +Y KCG++ A++VFD P +
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 140 VVSWTSLISGYV-----QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+V+W +++ Y + + +H+F + + T +TL L C + +
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ +H Y +K E D V +L ++YS CG + A F+ +RE++V+ W ++ +
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC---GTMLSLRVGAQVHSLGIKLGYASNL 311
G + + FS+ G++P+EF++ I + C GT L +G QVH + +K G S++
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTD-DLELGKQVHGIAVKSGLDSDV 321
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ +Y K G A+++F+ M H++L++WN+MI+ AQ + E
Sbjct: 322 SVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQ-----------SSLEEE 370
Query: 372 ALSIFSKLNSSGMKPDLYTFSSIL-----TICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
++++F L G+KPD +T +SI C LV L+QG+QIHA +K GF SD+ V
Sbjct: 371 SVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVN 430
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+ +++MY KCG + A VF +S ++WTSMI+G ++ QAL+++ M + V
Sbjct: 431 SGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 490
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA 544
P++ TF + A S + + ++ K+ V D ++ L+DM+ + G IE+A
Sbjct: 491 PDEYTFATLIKASSCVTALEQGR---QLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDA 547
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ KKM+ N +W+ + G +HGN E
Sbjct: 548 YRLFKKMNVR-NIALWNAMLVGLAQHGNAE 576
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L++ +L +HA+++K D FV T LV++Y KCGN+E+A ++F +
Sbjct: 495 TFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM 554
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE-SIRLG 194
N+ W +++ G Q+ E A+++F M G P V+ L+ACS +
Sbjct: 555 NVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAY 614
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT-TVIGACGE 253
+ +H+ Y E + + L G + A K + K S ++GAC
Sbjct: 615 EYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRI 674
Query: 254 NGEAVQGLRFFSKMLS 269
G+ G R +++ +
Sbjct: 675 QGDVETGKRVAARLFA 690
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/692 (35%), Positives = 389/692 (56%), Gaps = 17/692 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + ++ LL+ C + L + IH ++ G + F MT +VN+Y KC +EE
Sbjct: 169 DGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEE 228
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A K+FD +P ++V W ++ISGY QN + A+ + L M E G P ++T+ + L A +
Sbjct: 229 AYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVAD 288
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ S+R+G+ IH Y ++ E +V +L +YS CGS+ +A F+R+ K V+SW ++
Sbjct: 289 VGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSM 348
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG+ + F KM+ E ++ T+ C + + G VH L +L
Sbjct: 349 IDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLEL 408
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S++ V NS++ +Y KC VD A ++F+ + H LV+WNAMI G+AQ N
Sbjct: 409 GSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQ------------N 456
Query: 368 GG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EA+ F K+ +KPD +T S++ + L L Q + IH L ++T +V V
Sbjct: 457 GRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVA 516
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TALV+MY KCG + A ++F M R + +W +MI G+ H L AL+LFE M ++
Sbjct: 517 TALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIK 576
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+VTF+ L+ACS++G+V E YF M+K+Y ++P MDHY ++D+ R + EA+D
Sbjct: 577 PNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWD 636
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI+KM EP ++ + CR H N+ELG AA ++ L P D + +L +I+ +A
Sbjct: 637 FIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASM 696
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W+ VA V+ ++ + +T WS + ++++V++F HPQ+ +I+ L+ L + K
Sbjct: 697 WDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKA 756
Query: 667 FGYKQQ----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY E +E HSEKLAIAF LLNT + I + K+ +C DCHN
Sbjct: 757 AGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNAT 816
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ +T REIIVRD +R H F +G C+C D+
Sbjct: 817 KYISLVTKREIIVRDMRRFHHFKDGTCSCGDY 848
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 245/512 (47%), Gaps = 27/512 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ C + K L + I+K G + + T LV+++ K G++ EA +VF +
Sbjct: 83 LLELCTSMKELHQFIPL---IIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKI 139
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+ +++ GY +NS + A+ F M G P L C +R GK+IH
Sbjct: 140 DELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHC 199
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
++ + + ++Y+ C + A K F+R+ E++++ W T+I +NG
Sbjct: 200 QLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKT 259
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L +M EG +P+ T+ SI + SLR+G +H ++ G+ S + V +++
Sbjct: 260 ALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVD 319
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG V A+ +FD M+ +V+WN+MI G+ Q D A+ IF K+
Sbjct: 320 MYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA-----------AMEIFQKM 368
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
++ T L C+ L +EQG +H L + SDV V +L++MY KC R+
Sbjct: 369 MDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRV 428
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+ A+ +F + +TL+SW +MI G+A + ++A+ F M L ++P+ T V + A
Sbjct: 429 DIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPAL 488
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEP 555
+ ++ +A ++ I+ +D + L+DM+ + G + A MD E
Sbjct: 489 AELSVLPQAKWIHGLV-----IRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMD-ER 542
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
+ W+ I G HG LG A E K+K
Sbjct: 543 HVTTWNAMIDGYGTHG---LGKAALELFEKMK 571
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/395 (31%), Positives = 197/395 (49%), Gaps = 12/395 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + EG + + + VS+L + SL IH + ++ G V T LV++Y KC
Sbjct: 265 LRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKC 324
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++ A+ +FD + VVSW S+I GYVQN P A+ +F M++ TNVT+ AL
Sbjct: 325 GSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGAL 384
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+ L + G+ +H + + + D SV NSL S+YS C ++ A + F ++ K ++
Sbjct: 385 HACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLV 444
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +I +NG + + +F KM + I+P+ FT+ S+ + L +H L
Sbjct: 445 SWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLV 504
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ N+ V +++ +Y KCG V A+KLFD M ++ TWNAMI G+
Sbjct: 505 IRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYG--------- 555
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLS 421
H G AL +F K+ +KP+ TF +L+ CS +E+G Q K G
Sbjct: 556 --THGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEP 613
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
+ A+V++ + R+ A +M IS
Sbjct: 614 AMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAIS 648
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/684 (35%), Positives = 389/684 (56%), Gaps = 17/684 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ LL+ C + L + IH ++ + F MT +VN+Y KC +++A K+FD +
Sbjct: 149 NFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRM 208
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++VSW ++I+G+ QN + A+ + L M + G P ++TL T L A + + + +GK
Sbjct: 209 PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH Y ++ ++ +L +YS CGS+ +A F+ + +K V+SW +++ +NG
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
E + + F KML EGI P T+ C + L G VH +L S++ V N
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN 388
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALS 374
S++ +Y KC VD A +F+ ++ V+WNAMI G+AQ NG +EAL+
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQ------------NGRVSEALN 436
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
FS++ S GMKPD +T S++ + L + IH L +++ ++ V TALV+MY
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A ++F +S R +I+W +MI G+ H L AL LF+ M V PN +T++
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
++ACS++G+V E L +F+ M+++Y ++P MDHY ++D+ R G I+EA+DFI+ M
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPIS 616
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P ++ + C+ H N+E+G AA++L +L P + + +L +I+ S +W VA V+
Sbjct: 617 PGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVR 676
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
++ L +T S + ++++V+SF HPQS I+ L+ELV + K GY +
Sbjct: 677 KTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTN 736
Query: 675 FELTDEESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L E+ HSEKLAIAFGLLNT + I V K+ +C DCHN K I+ +T
Sbjct: 737 LILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTG 796
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD +R H F NG C+C D+
Sbjct: 797 REIIVRDMQRFHHFKNGICSCGDY 820
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 202/381 (53%), Gaps = 12/381 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + EG + + + V++L + L + IH + ++ G + + T L ++Y KC
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKC 296
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++E A+ +FD + + VVSW S++ GYVQN +PE AI VF MLE G PT VT+ AL
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+ L + GK +H +V + D SV NSL S+YS C ++ A FN + + +
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +I +NG + L FS+M S G++P+ FT+ S+ + R +H L
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ N+ V +++ +Y KCG + A+KLFD +S +++TWNAMI G+
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG--------- 527
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLS 421
H G AL +F K+ ++P+ T+ S+++ CS +++G ++ G
Sbjct: 528 --THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 585
Query: 422 DVVVGTALVNMYKKCGRIERA 442
+ A+V++ + GRI+ A
Sbjct: 586 SMDHYGAMVDLLGRAGRIKEA 606
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 213/441 (48%), Gaps = 26/441 (5%)
Query: 163 FLDMLEAGNYPTNVTLGTA---LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
F + E + P++V A L C+S++ + QI V+K ++ L SL
Sbjct: 34 FHTLSERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSL 90
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
+S GS+N A + F I +K + T++ +N L F +M + ++P +
Sbjct: 91 FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
T + VCG L+ G ++H I +A+N+ ++ +Y KC +D+A K+FD M
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+LV+WN +IAG +Q NG +AL + ++ G +PD T ++L
Sbjct: 211 RDLVSWNTIIAGFSQ------------NGFAKKALELVLRMQDEGQRPDSITLVTVLPAA 258
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ + L G+ IH ++ GF V + TAL +MY KCG +E A +F M +T++SW
Sbjct: 259 ADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWN 318
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
SM+ G+ + +A+ +FE ML G+ P VT + AL AC++ G + E + +
Sbjct: 319 SMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL-ERGKFVHKFVDQ 377
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LG 576
+ + LI M+ + ++ A D ++ V W+ I G ++G + L
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR-THVSWNAMILGYAQNGRVSEALN 436
Query: 577 FYAAEQLLKLKPKDCESYAML 597
++ + L +KP +S+ M+
Sbjct: 437 CFSEMKSLGMKP---DSFTMV 454
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 247/668 (36%), Positives = 392/668 (58%), Gaps = 21/668 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G +D V T LV++Y K ++E+ ++VFD + NVVSWTSL++GY QN
Sbjct: 114 VHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGL 173
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ +F M G P T L ++ ++ G Q+H V+K + VGNS
Sbjct: 174 NEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNS 233
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ ++YS ++ A F+ + +N +SW ++I NG ++ F +M EG++
Sbjct: 234 MVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLT 293
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ ++ +C + + Q+H IK G +L ++ ++M Y KC +D+A KLF
Sbjct: 294 QTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFC 353
Query: 336 GMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLN-SSGMKPDLYTFS 392
M V N+V+W A+I+G+ Q NG T+ A+++F ++ G++P+ +TFS
Sbjct: 354 MMHGVQNVVSWTAIISGYVQ------------NGRTDRAMNLFCQMRREEGVEPNEFTFS 401
Query: 393 SILTICSRLVA-LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+L C+ A +EQG+Q H+ ++K+GF + + V +ALV MY K G IE A+ VF
Sbjct: 402 SVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVD 461
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R L+SW SMI+G+A H ++L++FE+M + + +TF+G ++AC++AG+V E Y
Sbjct: 462 RDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY 521
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F++M K+Y I P M+HY C++D++ R G +E+A D I KM F IW +A CR H
Sbjct: 522 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHL 581
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
N++LG AAE+L+ L+P+D +Y +L +I+ +AG W++ A V+ L +K+ + +SWI
Sbjct: 582 NVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 641
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASVY--- 686
+K+K +SF D HPQS I+ L+EL + K GY + L D EE V
Sbjct: 642 EVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQ 701
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSE+LAIAFGL+ TP +PI +VK+ +C DCH IK+I+ + R+I+VRDS R H F
Sbjct: 702 HSERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKG 761
Query: 747 GHCTCRDF 754
G C+C D+
Sbjct: 762 GSCSCGDY 769
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 250/747 (33%), Positives = 405/747 (54%), Gaps = 54/747 (7%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
GN+ P ++ E + P T ++S+L+ C N L A IH + +G D
Sbjct: 156 GNNHPAKAFDTFERMKDANIEPNRIT--FLSILKACNNYSMLEKAREIHTVVKASGMETD 213
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V T L+ +Y KCG + A ++F + NVVSWT++I Q+ + A ++ ML+
Sbjct: 214 VAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQ 273
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
AG P VT + L +C++ E++ G++IH+++ + E D V N+L ++Y C +
Sbjct: 274 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQD 333
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENG----EAV-QGLRFFSKMLSEGIQPNEFTLTSIS 283
A + F+R+ +++V+SW+ +I ++G E++ + + +M EG+ PN+ T SI
Sbjct: 334 ARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSIL 393
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI--MY---------------------- 319
C +L G Q+H+ K+G+ S+ ++ +I MY
Sbjct: 394 KACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVV 453
Query: 320 -------LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+Y+KCG + A+K+F MS N+V+WN MIAG+AQ D+AK
Sbjct: 454 AWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAK-----------V 502
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ S + G +PD T SIL C L ALE+G+ +HA +K G SD VV T+L+ M
Sbjct: 503 FELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGM 562
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG + A VF ++S R ++W +M+ G+ H + +A+ LF+ ML V PN++TF
Sbjct: 563 YSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITF 622
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
++AC AG+V E F +MQ+++++KP HY C++D+ R G ++EA +FI++M
Sbjct: 623 TAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMP 682
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
EP+ +W + C+ H N++L +AA +L+L+P + Y L +I+ AGRW+D
Sbjct: 683 CEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTK 742
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V+ + ++ L + S I I ++++F D HP+ I L+ L ++ K GY
Sbjct: 743 VRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPD 802
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
F L D +E A +HSEKLAIA+GLL TP +PI ++K+ +C DCH K I+
Sbjct: 803 MRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTPPGTPIRIMKNLRVCGDCHTATKFISK 862
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI+ RD+ R H F NG C+C DF
Sbjct: 863 IRKREIVARDANRFHYFKNGTCSCGDF 889
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 174/622 (27%), Positives = 301/622 (48%), Gaps = 78/622 (12%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EA+ +L G V +++Y +++ C + + +++H + + G D ++
Sbjct: 59 LKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNS 118
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N Y K G++ ++VF + +VV+W+S+I+ Y N+ P A F M +A P
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T + L AC++ + ++IH V E D +V +L ++YS CG ++ A + F
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQ 238
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+++E+NV+SWT +I A ++ + + + KML GI PN T S+ + C T +L
Sbjct: 239 KMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNR 298
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++HS + G +++ V N+++ +Y KC + +A++ FD MS ++++W+AMIAG+AQ
Sbjct: 299 GRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
K+ L E + ++ G+ P+ TF SIL CS ALEQG QIHA
Sbjct: 359 SGYQDKESLD------EVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI 412
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRI-------------------------------ERAS 443
K GF SD + TA+ NMY KCG I A
Sbjct: 413 SKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAE 472
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC---- 499
+VF EMSTR ++SW MI G+A + +L M + G +P++VT + L AC
Sbjct: 473 KVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALS 532
Query: 500 ------------------SNAGMVYEALGYFEMMQKEYKIKPVMDH--------YMCLID 533
S+ + +G + + + + V D + ++
Sbjct: 533 ALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLA 592
Query: 534 MFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLK 587
+ + G EA D K+M E PNE+ ++ I+ C R G ++ G F ++ ++K
Sbjct: 593 GYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMK 652
Query: 588 PKDCESYAMLLDIFVSAGRWED 609
P + Y ++D+ AGR ++
Sbjct: 653 PGK-QHYGCMVDLLGRAGRLQE 673
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 158/323 (48%), Gaps = 25/323 (7%)
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + ++ + G+ N T I C + G VH +LG A ++ +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS++ Y K G V +++F M+ ++VTW++MIA +A +N +A
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYA-----------GNNHPAKAFD 165
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F ++ + ++P+ TF SIL C+ LE+ +IH + +G +DV V TAL+ MY
Sbjct: 166 TFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYS 225
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A +F +M R ++SWT++I A H ++A +L+E ML AG+ PN VTFV
Sbjct: 226 KCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVS 285
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGCIEEA---FDFI 548
L +C+ EAL + + + + LI M+ + CI++A FD +
Sbjct: 286 LLNSCNTP----EALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRM 341
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
K D + WS IAG + G
Sbjct: 342 SKRDV----ISWSAMIAGYAQSG 360
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 243/709 (34%), Positives = 405/709 (57%), Gaps = 20/709 (2%)
Query: 55 RSLGFQEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R F +AL + EG +V + +LL+ V+ +HA + K G H D F
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAF 172
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V T L++ Y GN++ A+ VFD++ ++VSWT +++ Y +N E ++ +F M G
Sbjct: 173 VGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMG 232
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P N T+ AL +C LE+ +GK +H +K + D VG +L LY+ G + A
Sbjct: 233 YKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F + + +++ W+ +I ++ + + L F +M + PN FT S+ C + +
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
SL +G Q+HS +K G SN+ V N+IM +Y KCG ++ + KLF+ + N VTWN +I
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G+ Q+ D G A+++F+ + M+P T+SS+L + L ALE G QI
Sbjct: 413 GYVQLGD-----------GERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQI 461
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H+LT+KT + D VV +L++MY KCGRI A F +M+ R +SW +MI G++ H +S
Sbjct: 462 HSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMS 521
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL LF+ M +PN++TFVG L+ACSNAG++Y+ +FE M K+Y IKP ++HY C
Sbjct: 522 MEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTC 581
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++ + RLG +EA I ++ ++P+ ++W + C H ++LG A+ +L+++P D
Sbjct: 582 MVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHD 641
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
++ +L +++ +AGRW++VA V+ +++K+ + SW+ + V+ F D HP
Sbjct: 642 DATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDI 701
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
I +L+ L +K + GY + L D +E HSE+LA+A+GL+ TP+
Sbjct: 702 KLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCS 761
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I ++K+ +C DCH +K+I+ + REI++RD R H F +G C+C D+
Sbjct: 762 IRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDY 810
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 170/557 (30%), Positives = 283/557 (50%), Gaps = 33/557 (5%)
Query: 39 RSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECV-NRKSLSNAEIIH 97
R +KL QL R++ Q+ LS L + SY +LQ+ + N + +H
Sbjct: 8 RDSTKLSQL---LHQCRNIHHQQCLSAL------DSHSYAHMLQQIIRNGADPIAGKHLH 58
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE 157
HI+K G+ D F L+N Y + ++++A K+FD +P+ N +S+ +L GY ++ Q
Sbjct: 59 CHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFH 118
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
A+H L + + G+ T L S++ L +HA V K D VG +L
Sbjct: 119 QALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALI 178
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
YS G+++ A F+ I K+++SWT ++ EN + L+ F++M G +PN F
Sbjct: 179 DAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNF 238
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
T++ C + + VG VH +K Y +L V +++ LY K G + +AQ+LF+ M
Sbjct: 239 TISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEM 298
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
+L+ W+ MIA +AQ + EAL +F ++ + + P+ +TF+S+L
Sbjct: 299 PKTDLIPWSLMIARYAQ-----------SDRSKEALDLFLRMRQTSVVPNNFTFASVLQA 347
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ V+L+ G+QIH+ LK G S+V V A++++Y KCG IE + ++F E+ R ++W
Sbjct: 348 CASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTW 407
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
++I G+ +A+ LF ML ++P +VT+ L A ++ + L + K
Sbjct: 408 NTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIK 467
Query: 518 E-YKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG-N 572
Y V+ + LIDM+ + G I +A FD + K D EV W+ I G HG +
Sbjct: 468 TMYNKDTVVAN--SLIDMYAKCGRINDARLTFDKMNKRD----EVSWNAMICGYSMHGMS 521
Query: 573 ME-LGFYAAEQLLKLKP 588
ME L + Q KP
Sbjct: 522 MEALNLFDMMQHTDCKP 538
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 244/684 (35%), Positives = 388/684 (56%), Gaps = 17/684 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ LL+ C + L + IH ++ + F MT +VN+Y KC +++A K+FD +
Sbjct: 149 NFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRM 208
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++VSW ++I+G+ QN + A+ + L M + G P ++TL T L A + + + +GK
Sbjct: 209 PERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGK 268
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH Y ++ ++ +L +YS CGS+ +A F+ + +K V+SW +++ +NG
Sbjct: 269 SIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNG 328
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
E + + F KML EGI P T+ C + L G VH +L S++ V N
Sbjct: 329 EPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMN 388
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALS 374
S++ +Y KC VD A +F+ ++ V+WNAMI G+AQ NG +EAL+
Sbjct: 389 SLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQ------------NGRVSEALN 436
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
FS++ S GMKPD +T S++ + L + IH L +++ ++ V TALV+MY
Sbjct: 437 CFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYS 496
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A ++F +S R +I+W +MI G+ H L AL LF+ M V PN +T++
Sbjct: 497 KCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLS 556
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
++ACS++G+V E L +F+ M+++Y ++P MDHY ++D+ R G I+EA+DFI+ M
Sbjct: 557 VISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPIS 616
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P ++ C+ H N+E+G AA++L +L P + + +L +I+ S +W VA V+
Sbjct: 617 PGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVR 676
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
++ L +T S + ++++V+SF HPQS I+ L+ELV + K GY +
Sbjct: 677 KTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTN 736
Query: 675 FELTDEESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L E+ HSEKLAIAFGLLNT + I V K+ +C DCHN K I+ +T
Sbjct: 737 LILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTG 796
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD +R H F NG C+C D+
Sbjct: 797 REIIVRDMQRFHHFKNGICSCGDY 820
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 202/381 (53%), Gaps = 12/381 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + EG + + + V++L + L + IH + ++ G + + T L ++Y KC
Sbjct: 237 LRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKC 296
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++E A+ +FD + + VVSW S++ GYVQN +PE AI VF MLE G PT VT+ AL
Sbjct: 297 GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEAL 356
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+ L + GK +H +V + D SV NSL S+YS C ++ A FN + + +
Sbjct: 357 HACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHV 416
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +I +NG + L FS+M S G++P+ FT+ S+ + R +H L
Sbjct: 417 SWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLI 476
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ N+ V +++ +Y KCG + A+KLFD +S +++TWNAMI G+
Sbjct: 477 IRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYG--------- 527
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLS 421
H G AL +F K+ ++P+ T+ S+++ CS +++G ++ G
Sbjct: 528 --THGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEP 585
Query: 422 DVVVGTALVNMYKKCGRIERA 442
+ A+V++ + GRI+ A
Sbjct: 586 SMDHYGAMVDLLGRAGRIKEA 606
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 213/441 (48%), Gaps = 26/441 (5%)
Query: 163 FLDMLEAGNYPTNVTLGTA---LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
F + E + P++V A L C+S++ + QI V+K ++ L SL
Sbjct: 34 FHTLSERAHIPSHVYKHPAAVLLELCTSMKELH---QIIPLVIKNGLYNEHLFQTKLVSL 90
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
+S GS+N A + F I +K + T++ +N L F +M + ++P +
Sbjct: 91 FSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNF 150
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
T + VCG L+ G ++H I +A+N+ ++ +Y KC +D+A K+FD M
Sbjct: 151 TYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+LV+WN +IAG +Q NG +AL + ++ G +PD T ++L
Sbjct: 211 RDLVSWNTIIAGFSQ------------NGFAKKALELVLRMQDEGQRPDSITLVTVLPAA 258
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ + L G+ IH ++ GF V + TAL +MY KCG +E A +F M +T++SW
Sbjct: 259 ADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWN 318
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
SM+ G+ + +A+ +FE ML G+ P VT + AL AC++ G + E + +
Sbjct: 319 SMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDL-ERGKFVHKFVDQ 377
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LG 576
+ + LI M+ + ++ A D ++ V W+ I G ++G + L
Sbjct: 378 LNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGR-THVSWNAMILGYAQNGRVSEALN 436
Query: 577 FYAAEQLLKLKPKDCESYAML 597
++ + L +KP +S+ M+
Sbjct: 437 CFSEMKSLGMKP---DSFTMV 454
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/750 (34%), Positives = 409/750 (54%), Gaps = 81/750 (10%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA----- 128
++ Y + L+ C ++ + + +H I++T ++ + F+ L+N YGK G+++ A
Sbjct: 5 SNYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFD 64
Query: 129 --------------------------QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
Q+VFD++P +VVSW SL+SGY N ++ V
Sbjct: 65 HIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRV 124
Query: 163 FLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
+ ML+ G+ N +T T L S+ + LG+QIH + K+ + VG+ L +Y+
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYA 184
Query: 222 TCGSLNSAIKAFNRIREKNV-------------------------------MSWTTVIGA 250
G +N A + F I EKN+ +SWTT+I
Sbjct: 185 KTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITG 244
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG + + F +M EG ++FT S+ + CG L+L G Q+H+ I+ Y N
Sbjct: 245 LTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDN 304
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
+ V ++++ +Y KC V A+ +F M H N+++W AM+ G+ Q NG
Sbjct: 305 IFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQ------------NGYS 352
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ IF + + + PD +T S+++ C+ L +LE+G Q H L +G + V V AL
Sbjct: 353 EEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNAL 412
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ +Y KCG +E A ++F EM R +SWT++++G+A +++ + LFE ML G+ P+
Sbjct: 413 ITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDG 472
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VTFVG L+ACS AG+V + YFE M KE++I P+ DHY C+ID+ R G +EEA +FI
Sbjct: 473 VTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFIN 532
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
+M F P+ + W+ ++ CR +GN+E+G +AAE L KL+P++ SY +L I+ + G+W+D
Sbjct: 533 QMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDD 592
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
VA ++ RE + + SWI+ K+KV+ F +D P S +I+ L+ L K GY
Sbjct: 593 VAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESLYLKMIEEGY 652
Query: 670 KQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
SF L D E + +HSEKLAIAFGLL P I VVK+ +C DCHN K
Sbjct: 653 VPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQIRVVKNLRVCGDCHNATKY 712
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REI+VRD+ R H F +G C+C DF
Sbjct: 713 ISRITQREILVRDAVRFHLFKDGVCSCGDF 742
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 244/553 (44%), Gaps = 98/553 (17%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M + NY T AL C + K++H +++ T +T + N+L + Y G
Sbjct: 1 MSSSSNYYT-----AALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGD 55
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGE-------------------------------N 254
L +A F+ I + N+ SW T++ A + N
Sbjct: 56 LKNARNVFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGN 115
Query: 255 GEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + +R ++ ML +G + N T +++ + + +G Q+H K GY S L V
Sbjct: 116 GLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFV 175
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG---------HAQMMD--LAKDD 362
+ ++ +Y K G +++A ++F+ + N+V +N MI G Q+ D KD
Sbjct: 176 GSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS 235
Query: 363 LS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+S NG EA+ F ++ G D +TF S+LT C +AL++G+QIHA
Sbjct: 236 ISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAY 295
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
++T + ++ VG+AL++MY KC ++ A VF +M + +ISWT+M+ G+ + S +A
Sbjct: 296 IIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEA 355
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSN----------------AGMV------------ 505
+++F DM + P+ T +++C+N +G++
Sbjct: 356 VRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITL 415
Query: 506 YEALGYFEMMQKEYKIKPVMDH--YMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIW 560
Y G E + + + D + L+ + + G E + M P+ V +
Sbjct: 416 YGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTF 475
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLK---LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
++ C R G +E G++ E ++K + P + Y ++D+ AGR E+ KN
Sbjct: 476 VGVLSACSRAGLVEKGYHYFECMVKEHRITPIP-DHYTCMIDLLSRAGRLEE---AKNFI 531
Query: 618 REEKLSETDDWSW 630
+ S D W
Sbjct: 532 NQMPFS-PDAIGW 543
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 128/232 (55%), Gaps = 4/232 (1%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA+ E G + ++ S+L C +L + IHA+I++T + FV +
Sbjct: 251 FKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSA 310
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KC N++ A+ VF + NV+SWT+++ GY QN E A+ +F DM +P
Sbjct: 311 LLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPD 370
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ TLG+ +++C++L S+ G Q H + +V N+L +LY CGSL A + F+
Sbjct: 371 DFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
++ ++ +SWT ++ + G+A + + F ML+ GI P+ T + S C
Sbjct: 431 EMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSAC 482
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/704 (34%), Positives = 393/704 (55%), Gaps = 20/704 (2%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
QEA ++ T E + ++VS+L C + L+ IH +++ G D V L
Sbjct: 111 QEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNAL 170
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG++ +A++VFD + + VSWT+L Y ++ E ++ + ML+ P+
Sbjct: 171 ISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSR 230
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+T L+AC SL ++ GKQIHA++V+ + D V +L +Y CG+ A + F
Sbjct: 231 ITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFEC 290
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++V++W T+I ++G+ + F +ML EG+ P+ T T++ S C L G
Sbjct: 291 LSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARG 350
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H+ K G S++R N+++ +Y K G + +A+++FD M ++V+W ++ +A
Sbjct: 351 KEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADC 410
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ E+ + F ++ G+K + T+ +L CS VAL+ G++IHA +
Sbjct: 411 DQV-----------VESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVV 459
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K G L+D+ V AL++MY KCG +E A RVF MS R +++W ++I G + +ALQ
Sbjct: 460 KAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQ 519
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
+E M G+RPN TFV L+AC +V E F M K+Y I P HY C++D+
Sbjct: 520 RYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDIL 579
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G + EA D I + +P+ +W +A CR H N+E+G AAE LKL+P++ Y
Sbjct: 580 ARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYV 639
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
L I+ +AG W DVA ++ +E + + SWI I +V+SF D HP++ EI+
Sbjct: 640 SLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYA 699
Query: 656 VLDELVEKAKCFGYKQQESF---ELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
L+ L ++ K GY F +L DE E A +HSEKLAIA+GL++TP +PI + K
Sbjct: 700 ELETLKKQMKSLGYVPDTRFVMHDLDDEGKERAVCHHSEKLAIAYGLISTPPGTPIRISK 759
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH K I+ +T REII RD+ R H F NG C+C D+
Sbjct: 760 NLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGECSCGDY 803
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 285/508 (56%), Gaps = 19/508 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+GP+V + YV LLQ CV K L+ + +H HI++ G + ++ L+ +Y CG++ E
Sbjct: 22 KGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNE 81
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD +VVSW +ISGY + A ++F M + P T + L+ACSS
Sbjct: 82 ARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSS 141
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ G++IH V++ +DT+VGN+L S+Y+ CGS+ A + F+ + ++ +SWTT+
Sbjct: 142 PAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTL 201
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
GA E+G + L+ + ML E ++P+ T ++ S CG++ +L G Q+H+ ++ Y
Sbjct: 202 TGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEY 261
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S++RV ++ +Y+KCG +A+++F+ +S+ +++ WN MI G L
Sbjct: 262 HSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQL--------- 312
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA F ++ G+ PD T++++L+ C+R L +G++IHA K G +SDV G
Sbjct: 313 --EEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGN 370
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+NMY K G ++ A +VF M R ++SWT+++ +A+ ++ F+ ML GV+
Sbjct: 371 ALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKA 430
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYM--CLIDMFVRLGCIEEA 544
N++T++ L ACSN AL + + + E K + D + L+ M+ + G +E+A
Sbjct: 431 NKITYMCVLKACSNP----VALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDA 486
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ M + V W+ I G ++G
Sbjct: 487 IRVFEGMSMR-DVVTWNTLIGGLGQNGR 513
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ +G + L+ G + D Y + +L C + L G+Q+H L+ G +V
Sbjct: 4 TGKDGWYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNV 63
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+ L+ +Y CG + A ++F + S ++++SW MI+G+A+ L+ +A LF M
Sbjct: 64 YITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQE 123
Query: 484 GVRPNQVTFVGALAACSNAGMV-YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
+ P++ TFV L+ACS+ ++ + + +M+ + + LI M+ + G +
Sbjct: 124 RLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN--ALISMYAKCGSVR 181
Query: 543 EA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
+A FD + D EV W+ G E L Y A +++P
Sbjct: 182 DARRVFDAMASRD----EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRP 228
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 247/694 (35%), Positives = 401/694 (57%), Gaps = 29/694 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGN-MEEAQKVFDN 134
Y ++++ C N + + ++KTG + D V L++++ K N E A KVFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ +NVV+WT +I+ +Q P AI FLDM+ +G TL + +AC+ LE++ LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSWTTVIGAC 251
KQ+H++ ++ DD V SL +Y+ C GS++ K F+R+ + +VMSWT +I
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 252 GENGE-AVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+N A + + FS+M+++G ++PN FT +S CG + RVG QV K G AS
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V NS++ +++K +++AQ+ F+ +S NLV++N + G + ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF----------- 455
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+A + S++ + +TF+S+L+ + + ++ +GEQIH+ +K G + V AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG I+ ASRVF M R +ISWTSMITGFA H + + L+ F M+ GV+PN+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT+V L+ACS+ G+V E +F M +++KIKP M+HY C++D+ R G + +AF+FI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M F+ + ++W F+ CR H N ELG AA ++L+L P + +Y L +I+ AG+WE+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ +E L + SWI + DK++ F D HP + +I+ LD L+ + K GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 670 KQQESFELTDEESASVY---------HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
L E + HSEK+A+AFGL++T P+ V K+ +C DCHN
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 815
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K I++++ REI++RD R H F +G C+C D+
Sbjct: 816 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDY 849
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/639 (26%), Positives = 315/639 (49%), Gaps = 68/639 (10%)
Query: 21 PSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLT-EGPKVQTS-SYV 78
PS + +K + + +LI + N+ +R G AL ++ +G + S ++
Sbjct: 9 PSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLR--GAVSALDLMARDGIRPMDSVTFS 66
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL+ C+ + +++HA +++ D + L+++Y K G+ +A+ VF+ + R
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 139 ---NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSW+++++ Y N + AI VF++ LE G P + + ACS+ + + +G+
Sbjct: 127 GKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR 186
Query: 196 QIHAYVVKY-QTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
+++K E D VG SL ++ S +A K F+++ E NV++WT +I C +
Sbjct: 187 VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + +RFF M+ G + ++FTL+S+ S C + +L +G Q+HS I+ G + V
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304
Query: 314 RNSIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
S++ +Y KC G VD+ +K+FD M ++++W A+I G+ + +LA T
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA----------T 354
Query: 371 EALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+++FS++ + G ++P+ +TFSS C L G+Q+ K G S+ V ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++M+ K R+E A R F +S + L+S+ + + G + QA +L ++ + +
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA--- 544
TF L+ +N G + + ++ + K+ + +C LI M+ + G I+ A
Sbjct: 475 FTFASLLSGVANVGSIRKGE---QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 545 FDFIKKMD-------------------------------FEPNEVIWSVFIAGCRRHGNM 573
F+F++ + +PNEV + ++ C G +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 574 ELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + + K+KPK E YA ++D+ AG D
Sbjct: 592 SEGWRHFNSMYEDHKIKPK-MEHYACMVDLLCRAGLLTD 629
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 55 RSLGFQEALSVLTEGPK----VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+L F++A +L+E + V ++ SLL N S+ E IH+ +VK G +
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+++Y KCG+++ A +VF+ + NV+SWTS+I+G+ ++ + F M+E G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P VT L+ACS + + G + ++ ++ + + L G L A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE----FTLTSISS 284
+ N + + +V+ W T +GAC + G K+L + PNE L++I +
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQLSNIYA 688
Query: 285 VCGTM---LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
G +R + +L +K G S + V + I Y+ A +++D + +
Sbjct: 689 CAGKWEESTEMRRKMKERNL-VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/705 (33%), Positives = 404/705 (57%), Gaps = 18/705 (2%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
R+L E + + P T + SLL C + + + +H++++K G D +
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVA--SLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS 354
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KC ++E A + F NVV W ++ Y Q + +FL M G P
Sbjct: 355 LLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T + L C+SL ++ LG+QIH V+K + + V + L +Y+ G L++A
Sbjct: 415 QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQ 474
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R+RE++V+SWT +I ++ + L+ F +M ++GI+ + +S S C + +L
Sbjct: 475 RLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQ 534
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ GY+ +L + N+++ LY +CG +A F+ + + ++WNA+I+G AQ
Sbjct: 535 GQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQ 594
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S H EAL +FS++N +G++ +L+TF S ++ + ++QG+QIHA+
Sbjct: 595 ---------SGH--CEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMM 643
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+KTG+ S+ L+ +Y KCG IE A R F EM + ++SW +MITG++ H +A+
Sbjct: 644 IKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAV 703
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LFE+M G+ PN VTFVG L+ACS+ G+V E L YF M KE+ + P +HY+C++D+
Sbjct: 704 SLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDL 763
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R + A +FI++M EP+ +IW ++ C H N+E+G +AA LL+L+P+D +Y
Sbjct: 764 LGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATY 823
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ +G+W+ + + ++ + + SWI +K+ +++F D LHP + +I+
Sbjct: 824 VLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIY 883
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEES-----ASVYHSEKLAIAFGLLNTPIVSPILVV 709
+ +D+L E+A GY Q L D E + HSEKLA+AFGLL+ PI V+
Sbjct: 884 EYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVI 943
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCHN+IK ++ ++ R I+VRD+ R H F G C+C+D+
Sbjct: 944 KNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDY 988
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 285/516 (55%), Gaps = 24/516 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKS-LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
++TE S++ S+L+ C K+ E IHA I+ G V L+++Y K G
Sbjct: 102 MITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNG 161
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+++ A+ VF+ L + VSW ++ISG QN + + AI +F M ++ PT + L+
Sbjct: 162 HVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLS 221
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ +E +LG+Q+H ++VK+ +T V N+L +LYS G+L +A + F+++ ++ +S
Sbjct: 222 ACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS 281
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ ++I + G + + L+ F KM + ++P+ T+ S+ S C ++ + G Q+HS I
Sbjct: 282 YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVI 341
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K+G +S+L + S++ LY+KC ++ A + F N+V WN M+ + Q+ +L
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNL----- 396
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+E+ IF ++ G+ P+ YT+ SIL C+ L AL+ GEQIH +K+GF +V
Sbjct: 397 ------SESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNV 450
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V + L++MY K G ++ A + + ++SWT+MI G+ H L +AL+LF++M
Sbjct: 451 YVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQ 510
Query: 484 GVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
G+R + + F A++AC+ N G A Y ++ I L+ ++ R
Sbjct: 511 GIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNA------LVSLYARC 564
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
G ++A+ +K+D + N + W+ I+G + G+ E
Sbjct: 565 GRAQDAYLAFEKIDAKDN-ISWNALISGFAQSGHCE 599
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 281/544 (51%), Gaps = 21/544 (3%)
Query: 28 LKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNR 87
LKD +VS+ S L Q NG + L Q S + P V + S+L C
Sbjct: 175 LKD---SVSWVAMISGLSQ-NGREDEAILLFCQMHKSAVIPTPYV----FSSVLSACTKI 226
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
+ E +H IVK G + FV LV +Y + GN+ A+++F + R + +S+ SLI
Sbjct: 227 ELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLI 286
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
SG Q + A+ +F M P VT+ + L+AC+S+ + GKQ+H+YV+K
Sbjct: 287 SGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMS 346
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D + SL LY C + +A + F +NV+ W ++ A G+ G + F +M
Sbjct: 347 SDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQM 406
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
EG+ PN++T SI C ++ +L +G Q+H+ IK G+ N+ V + ++ +Y K G +
Sbjct: 407 QIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGEL 466
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
D A+ + + ++V+W AMIAG+ Q H+ EAL +F ++ + G++ D
Sbjct: 467 DTARGILQRLREEDVVSWTAMIAGYTQ-----------HDLFAEALKLFQEMENQGIRSD 515
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
FSS ++ C+ + AL QG+QIHA + +G+ D+ +G ALV++Y +CGR + A F
Sbjct: 516 NIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFE 575
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
++ + ISW ++I+GFA +ALQ+F M AGV N TF A++A +N + +
Sbjct: 576 KIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQ 635
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
MM K + LI ++ + G IE+A +M E N V W+ I G
Sbjct: 636 GKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGY 693
Query: 568 RRHG 571
+HG
Sbjct: 694 SQHG 697
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 255/506 (50%), Gaps = 20/506 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + +Y+ L + C N SL +A+ +HA I K+G + + + L+++Y G ++ A
Sbjct: 5 GIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNA 64
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
K+FD++P NV W +ISG + + +F M+ P T + L ACS
Sbjct: 65 IKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGG 124
Query: 189 ES-IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ ++ +QIHA ++ + V N L LYS G ++ A F R+ K+ +SW +
Sbjct: 125 KAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAM 184
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + + F +M + P + +S+ S C + ++G Q+H +K G
Sbjct: 185 ISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGL 244
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+S V N+++ LY + G + A+++F M + +++N++I+G AQ
Sbjct: 245 SSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ-----------RG 293
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
AL +F K+ MKPD T +S+L+ C+ + A +G+Q+H+ +K G SD+++
Sbjct: 294 FSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEG 353
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+L+++Y KC IE A F+ T ++ W M+ + ++ +F M + G+ P
Sbjct: 354 SLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMP 413
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEY-KIKPVMDHYMC--LIDMFVRLGCIEEA 544
NQ T+ L C++ G AL E + + K + Y+C LIDM+ + G ++ A
Sbjct: 414 NQYTYPSILRTCTSLG----ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTA 469
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRH 570
++++ E + V W+ IAG +H
Sbjct: 470 RGILQRLR-EEDVVSWTAMIAGYTQH 494
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 161/348 (46%), Gaps = 29/348 (8%)
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M GI+ N T + C SL ++H+ K G+ + + ++ +YL G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
VD A KLFD + N+ WN +I+G L A ++ L +FS + + + P
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISG-----------LLAKKLASQVLGLFSLMITENVTP 109
Query: 387 DLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
D TF+S+L CS A + EQIHA + GF S +V L+++Y K G ++ A V
Sbjct: 110 DESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLV 169
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + + +SW +MI+G + + +A+ LF M + V P F L+AC+ +
Sbjct: 170 FERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIEL- 228
Query: 506 YEALGYFEMMQKEY----KIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
F++ ++ + K + ++C L+ ++ R G + A KM + +
Sbjct: 229 ------FKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH-RRDRIS 281
Query: 560 WSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
++ I+G + G + L + QL +KP DC + A LL S G
Sbjct: 282 YNSLISGLAQRGFSDRALQLFEKMQLDCMKP-DCVTVASLLSACASVG 328
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 259/748 (34%), Positives = 416/748 (55%), Gaps = 82/748 (10%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y +LL+ C + + A+ +H+HI+KT + + F++ L++ Y K G++ A KVFD +P
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 137 RINV-------------------------------VSWTSLISGYVQNSQPELAIHVFLD 165
N+ VSW SLISGY ++ +
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 166 MLE-AGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
ML+ G++ N +T T L S ++LG+QIH +VVK+ VG+ L +YS
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 224 GSLNSAIKAFNRIREKNV-------------------------------MSWTTVIGACG 252
G ++ A K F+ + EKNV +SWT++I
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NG + F +M E +Q +++T S+ + CG +++L+ G QVH+ I+ Y N+
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
V ++++ +Y KC + A+ +F M+ N+V+W AM+ G+ Q NG E
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ------------NGYSEE 359
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ FS + G++PD +T S+++ C+ L +LE+G Q HA L +G +S + V ALV
Sbjct: 360 AVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVT 419
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG IE + R+F E+S + ++WT++++G+A +++ + LFE ML G++P++VT
Sbjct: 420 LYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVT 479
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+G L+ACS AG+V + FE M E+ I P+ DHY C+ID+F R G IEEA +FI KM
Sbjct: 480 FIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKM 539
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
F P+ + W+ ++ CR +GNM++G +AAE L++L P + SY +L ++ + G+WE+VA
Sbjct: 540 PFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVA 599
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
++ R++ L + SWI+ K++V+ F +D +P S +I+ L++L K GY
Sbjct: 600 RLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVP 659
Query: 672 QES---FELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
+ ++ D E + +HSEKLAIAFGLL P PI VVK+ +C DCHN K I+
Sbjct: 660 DMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKYIS 719
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T REI+VRD+ R H F +G C+C DF
Sbjct: 720 KITNREILVRDTARFHLFKDGTCSCGDF 747
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 153/285 (53%), Gaps = 2/285 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E ++ ++ S+L C +L + +HA+I++T + FV + LV++Y KC N++
Sbjct: 269 ENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKS 328
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + NVVSWT+++ GY QN E A+ F DM + G P + TLG+ +++C++
Sbjct: 329 AEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCAN 388
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ G Q HA + +V N+L +LY CGS+ + + FN I K+ ++WT +
Sbjct: 389 LASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTAL 448
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLG 306
+ + G+A + + F ML+ G++P++ T + S C + G Q+ S+ + G
Sbjct: 449 VSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHG 508
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIA 350
++ L+ + G ++EA+ + M + ++W +++
Sbjct: 509 IVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLS 553
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 389/690 (56%), Gaps = 19/690 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V +Y LL+ C + L + IH +VK+G D F MT L N+Y KC + EA+
Sbjct: 133 PVVYNFTY--LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEAR 190
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
KVFD +P ++VSW ++++GY QN +A+ + M E P+ +T+ + L A S+L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALR 250
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
IR+GK+IH Y ++ + ++ +L +Y+ CGSL +A F+ + E+NV+SW ++I
Sbjct: 251 LIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMID 310
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A +N + + F KML EG++P + ++ C + L G +H L ++L
Sbjct: 311 AYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDR 370
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
N+ V NS++ +Y KC VD A +F + +V+WNAMI G AQ NG
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQ------------NGR 418
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL+ FS++ + +KPD +T+ S++T + L + IH + ++ +V V TA
Sbjct: 419 PIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTA 478
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG I A +F MS R + +W +MI G+ H + AL+LFE+M +RPN
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPN 538
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+ ++ACS++G+V L F MM++ Y I+P MDHY ++D+ R G + EA+DFI
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+M +P ++ + C+ H N+ AE+L +L P+D + +L +I+ +A WE
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWE 658
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V V+ + L +T S + IK++V+SF HP S +I+ L++L+ + K G
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSKKIYAFLEKLICQIKEAG 718
Query: 669 YKQQESFELTDEESAS----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
Y + L E+ HSEKLAI+FGLLNT + I V K+ +C DCHN K
Sbjct: 719 YVPDTNLILGLEDDVKEQLLSSHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REIIVRD +R H F NG C+C D+
Sbjct: 779 ISLVTGREIIVRDMQRFHHFKNGACSCGDY 808
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 211/429 (49%), Gaps = 24/429 (5%)
Query: 167 LEAGNY-PTNVTLGTA---LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
L NY P NV A L CSSL+ +R I + K + L SL+
Sbjct: 25 LSQRNYIPANVYEHPAALLLERCSSLKELR---HILPLIFKNGLYQEHLFQTKLVSLFCR 81
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
GS++ A + F I +K + + T++ + + + L+FF +M + ++P + T +
Sbjct: 82 YGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYL 141
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
VCG LRVG ++H L +K G++ +L + +Y KC V EA+K+FD M +L
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDL 201
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WN ++AG++Q NG AL + + + +KP T S+L S L
Sbjct: 202 VSWNTIVAGYSQ------------NGMARMALEMVNLMCEENLKPSFITIVSVLPAVSAL 249
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
+ G++IH ++ GF S V + TALV+MY KCG ++ A +F M R ++SW SMI
Sbjct: 250 RLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMI 309
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ + +A+ +F+ ML GV+P V+ +GAL AC++ G + E + + E ++
Sbjct: 310 DAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDL-ERGRFIHKLSVELEL 368
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM--ELGFYA 579
+ LI M+ + ++ A K+ V W+ I G ++G L +++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTIVSWNAMILGFAQNGRPIEALNYFS 427
Query: 580 AEQLLKLKP 588
Q +KP
Sbjct: 428 QMQARTVKP 436
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG K S + L C + L IH V+ ++ V+ L+++Y KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKE 387
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A +F L +VSW ++I G+ QN +P A++ F M P T + +TA
Sbjct: 388 VDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITA 447
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ L K IH V++ + + V +L +Y+ CG++ A F+ + E++V +W
Sbjct: 448 IAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+I G +G L F +M I+PN T S+ S C
Sbjct: 508 NAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISAC 549
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 257/740 (34%), Positives = 407/740 (55%), Gaps = 81/740 (10%)
Query: 84 CVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV--- 140
C ++ + A+ +H I+K+ ++ + F+ L+N Y K GN+ A+ VFD +P+ N
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 141 ----------------------------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
VSW SLISGYV A+ + M++ G
Sbjct: 75 NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134
Query: 173 PTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
N +T T L SS + LG+QIH +VK+ VG+SL +Y+ G ++ A +
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194
Query: 232 AFNRIREKNV-------------------------------MSWTTVIGACGENGEAVQG 260
F+ ++E+NV +SWTT+I +NG +
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEA 254
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
+ F M EG+ +++T S+ + CG + +L+ G ++H+L I+ GY N+ V ++++ +
Sbjct: 255 MDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDM 314
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL 379
Y KC V A+ +F M++ N+V+W AM+ G+ Q NG EA+ +F +
Sbjct: 315 YCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQ------------NGFSEEAVRVFCDM 362
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+G++PD +T S+++ C+ L +LE+G Q H L +G +S + V AL+ +Y KCG I
Sbjct: 363 QRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSI 422
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E ++++F EMS R +SWT++++G+A +++ + LFE ML+ G++P+ VTF+ L+AC
Sbjct: 423 EDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSAC 482
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S AG+V YFE M K++ I P DHY C+ID+F R G +EEA +FI KM F P+ +
Sbjct: 483 SRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIG 542
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W+ ++ CR +GN E+G +AAE LL+L P++ Y +L I+ + G+W +VA ++ RE
Sbjct: 543 WATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMRE 602
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD 679
+ + +SWI+ K KVY F +D P S +I+ L++L K GY S L D
Sbjct: 603 KGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHD 662
Query: 680 EESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
E + +HSEKLAIAFGLL P PI VVK+ +C DCHN K I+ ++ REI+
Sbjct: 663 VEDSEKMKMLNHHSEKLAIAFGLLFIPHGLPIRVVKNLRVCGDCHNATKYISKISQREIL 722
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
VRD+ R H F +G C+C DF
Sbjct: 723 VRDAVRFHLFKDGTCSCGDF 742
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 125/219 (57%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++ S+L C ++L + IH I+++G + + FV + LV++Y KC ++
Sbjct: 264 EGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRY 323
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + NVVSWT+++ GY QN E A+ VF DM G P + TLG+ +++C++
Sbjct: 324 AEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCAN 383
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ G Q H + +V N+L +LY CGS+ + + F+ + ++ +SWT +
Sbjct: 384 LASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTAL 443
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ + G+A + + F +ML +G++P+ T ++ S C
Sbjct: 444 VSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSAC 482
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 2/175 (1%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S++ C N SL H + +G V L+ +YGKCG++E++ ++FD +
Sbjct: 376 SVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFR 435
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ VSWT+L+SGY Q + I +F ML G P VT L+ACS + G+Q
Sbjct: 436 DEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYF 495
Query: 199 AYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
++K + + + L+ G L A N++ + + W T++ +C
Sbjct: 496 ESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSC 550
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 394/690 (57%), Gaps = 19/690 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T + S+L+ C ++ + IHAH+++ G D V L+ +Y KCG++ A+
Sbjct: 196 PNVYT--FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P+ + +SW ++ISGY +N + +F M E P +T+ T +AC L+
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ RLG+ +H YVVK + D S+ NSL +YS+ G L A F+R+ K+V+SWT +I
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ + + + + M EGI P+E TL S+ S C + L +G ++H + IK G S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V NS++ +Y KC VD A ++F +S N+V+W ++I G L +N
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG-----------LRINNRS 482
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL F ++ S MKP+ T S+L+ C+R+ AL +G++IHA L+TG D + A+
Sbjct: 483 FEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY +CGR A F + + +W ++TG+A + A++LF+ ML + P++
Sbjct: 542 LDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TF+ L ACS +GMV E L YF +M+ +Y + P + HY C++D+ R G +++A+DFI+
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQ 660
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M P+ IW + CR H N+ELG AA+++ + K Y +L +++ G W+
Sbjct: 661 DMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDK 720
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V+ V++L RE LS SW+ IK KV++F D H QS EI VLD K K G+
Sbjct: 721 VSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Query: 670 KQQESFELTDEES--ASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+S ++ ES A ++ HSE+ AIAFGL+NT PI V K+ MC CHN +K I
Sbjct: 781 GNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFI 840
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+++ REI VRD + H F +G C+C D G
Sbjct: 841 STIVRREISVRDVEEYHHFKDGVCSCGDEG 870
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 289/577 (50%), Gaps = 54/577 (9%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+V+ +Y++LL+ C R++ ++ + + S + L++++ + GN+ +A
Sbjct: 94 EVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWY 153
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF + +V SW L+ GY + + A++++ ML A P T + L C+ +
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
I GK+IHA+V+++ E D VGN+L ++Y CG +++A F+++ +++ +SW +I
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
ENG ++GL FS M + P+ T+T+++S C + + R+G VH +K + +
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + NS++ +Y G ++EA+ +F M ++V+W AMIA L +H
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA-----------SLVSHKLPF 382
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+A+ + + G+ PD T S+L+ C+ + L+ G ++H + +KTG +S V+V +L+
Sbjct: 383 KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLI 442
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KC ++ A VF +S + ++SWTS+I G ++ S +AL F M ++PN V
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSV 501
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLG--------- 539
T + L+AC+ G + E+ + D ++ ++DM+VR G
Sbjct: 502 TLISVLSACARIGALMRGK---EIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF 558
Query: 540 ------------------------CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
E FD + +++ P+E+ + + C + G +
Sbjct: 559 NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTE 618
Query: 576 G---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + L P + + YA ++DI AG+ +D
Sbjct: 619 GLEYFNIMKNKYNLTP-NLKHYACVVDILGRAGQLDD 654
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 165/397 (41%), Gaps = 67/397 (16%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + VS+L C L +H +KTG V L+++Y KC ++
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VF N+ NVVSWTSLI G N++ A+ F M E+ P +VTL + L+AC+
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK-PNSVTLISVLSACAR 512
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++ GK+IHA+ ++ D + N++ +Y CG A+ FN ++K+V +W +
Sbjct: 513 IGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNIL 571
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + G+A + F KML I P+E T S+ C
Sbjct: 572 LTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS-------------------- 611
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM-------IAGHAQMMDLAK 360
K G+V E + F+ M + +T N I G A +D A
Sbjct: 612 ---------------KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
D + ++PD + ++L C +E GE + K F
Sbjct: 657 D----------------FIQDMPIRPDAAIWGALLNACRIHRNVELGE----IAAKRVFE 696
Query: 421 SD---VVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
D V L N+Y CG ++ S+V M R L
Sbjct: 697 KDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+ E K + + +S+L C +L + IHAH ++TG D F+ ++++Y +CG
Sbjct: 492 MKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRK 551
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A F N + +V +W L++GY Q Q +LA+ +F MLE +P +T + L AC
Sbjct: 552 VPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCAC 610
Query: 186 S 186
S
Sbjct: 611 S 611
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 394/690 (57%), Gaps = 19/690 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T + S+L+ C ++ + IHAH+++ G D V L+ +Y KCG++ A+
Sbjct: 196 PNVYT--FPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNAR 253
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P+ + +SW ++ISGY +N + +F M E P +T+ T +AC L+
Sbjct: 254 MLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLD 313
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ RLG+ +H YVVK + D S+ NSL +YS+ G L A F+R+ K+V+SWT +I
Sbjct: 314 NERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA 373
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ + + + + M EGI P+E TL S+ S C + L +G ++H + IK G S
Sbjct: 374 SLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVS 433
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V NS++ +Y KC VD A ++F +S N+V+W ++I G L +N
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILG-----------LRINNRS 482
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL F ++ S MKP+ T S+L+ C+R+ AL +G++IHA L+TG D + A+
Sbjct: 483 FEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAI 541
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY +CGR A F + + +W ++TG+A + A++LF+ ML + P++
Sbjct: 542 LDMYVRCGRKVPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE 600
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TF+ L ACS +GMV E L YF +M+ +Y + P + HY C++D+ R G +++A+DFI+
Sbjct: 601 ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQ 660
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M P+ IW + CR H N+ELG AA+++ + K Y +L +++ G W+
Sbjct: 661 DMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDK 720
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V+ V++L RE LS SW+ IK KV++F D H QS EI VLD K K G+
Sbjct: 721 VSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGF 780
Query: 670 KQQESFELTDEES--ASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+S ++ ES A ++ HSE+ AIAFGL+NT PI V K+ MC CHN +K I
Sbjct: 781 GNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFI 840
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+++ REI VRD + H F +G C+C D G
Sbjct: 841 STIVRREISVRDVEEYHHFKDGVCSCGDEG 870
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 289/577 (50%), Gaps = 54/577 (9%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+V+ +Y++LL+ C R++ ++ + + S + L++++ + GN+ +A
Sbjct: 94 EVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWY 153
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF + +V SW L+ GY + + A++++ ML A P T + L C+ +
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
I GK+IHA+V+++ E D VGN+L ++Y CG +++A F+++ +++ +SW +I
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
ENG ++GL FS M + P+ T+T+++S C + + R+G VH +K + +
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + NS++ +Y G ++EA+ +F M ++V+W AMIA L +H
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIA-----------SLVSHKLPF 382
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+A+ + + G+ PD T S+L+ C+ + L+ G ++H + +KTG +S V+V +L+
Sbjct: 383 KAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLI 442
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KC ++ A VF +S + ++SWTS+I G ++ S +AL F M ++PN V
Sbjct: 443 DMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQM-KESMKPNSV 501
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLG--------- 539
T + L+AC+ G + E+ + D ++ ++DM+VR G
Sbjct: 502 TLISVLSACARIGALMRGK---EIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQF 558
Query: 540 ------------------------CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
E FD + +++ P+E+ + + C + G +
Sbjct: 559 NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTE 618
Query: 576 G---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + L P + + YA ++DI AG+ +D
Sbjct: 619 GLEYFNIMKNKYNLTP-NLKHYACVVDILGRAGQLDD 654
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 165/397 (41%), Gaps = 67/397 (16%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + VS+L C L +H +KTG V L+++Y KC ++
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VF N+ NVVSWTSLI G N++ A+ F M E+ P +VTL + L+AC+
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK-PNSVTLISVLSACAR 512
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++ GK+IHA+ ++ D + N++ +Y CG A+ FN ++K+V +W +
Sbjct: 513 IGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNIL 571
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + G+A + F KML I P+E T S+ C
Sbjct: 572 LTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS-------------------- 611
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM-------IAGHAQMMDLAK 360
K G+V E + F+ M + +T N I G A +D A
Sbjct: 612 ---------------KSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAY 656
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
D + ++PD + ++L C +E GE + K F
Sbjct: 657 D----------------FIQDMPIRPDAAIWGALLNACRIHRNVELGE----IAAKRVFE 696
Query: 421 SD---VVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
D V L N+Y CG ++ S+V M R L
Sbjct: 697 KDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGL 733
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+ E K + + +S+L C +L + IHAH ++TG D F+ ++++Y +CG
Sbjct: 492 MKESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRK 551
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A F N + +V +W L++GY Q Q +LA+ +F MLE +P +T + L AC
Sbjct: 552 VPALNQF-NSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCAC 610
Query: 186 S 186
S
Sbjct: 611 S 611
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/710 (34%), Positives = 392/710 (55%), Gaps = 19/710 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
NS ++ F E + P V +Y LLQ L IH ++ G +
Sbjct: 120 NSTLRDAVRFYERMRCDEVMPVVYDFTY--LLQLSGENLDLRRGREIHGMVITNGFQSNL 177
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F MT +VN+Y KC +E+A K+F+ +P+ ++VSW ++++GY QN A+ V L M EA
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P ++TL + L A + L+++R+G+ IH Y + E +V ++ Y CGS+ SA
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F + +NV+SW T+I +NGE+ + F KML EG++P ++ C +
Sbjct: 298 RLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANL 357
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G VH L + ++ V NS++ +Y KC VD A +F + H +VTWNAMI
Sbjct: 358 GDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMI 417
Query: 350 AGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
G+AQ NG EAL++F ++ S +KPD +T S++T + L Q +
Sbjct: 418 LGYAQ------------NGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAK 465
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH L ++T +V V TAL++ + KCG I+ A ++F M R +I+W +MI G+ +
Sbjct: 466 WIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNG 525
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+AL LF +M V+PN++TF+ +AACS++G+V E + YFE M++ Y ++P MDHY
Sbjct: 526 HGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHY 585
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
++D+ R G +++A+ FI+ M +P + + CR H N+ELG A++L L P
Sbjct: 586 GAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDP 645
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
D + +L +++ SA W+ VA V+ ++ + +T S + ++++V++F HP
Sbjct: 646 DDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHP 705
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQ----ESFELTDEESASVYHSEKLAIAFGLLNTPIVS 704
QS I+ L+ L ++ K GY E +E HSE+LAIAFGLLNT +
Sbjct: 706 QSKRIYAYLETLGDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGT 765
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I + K+ +C DCH K I+ +T REIIVRD +R H F NG C+C D+
Sbjct: 766 AIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDY 815
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/574 (26%), Positives = 268/574 (46%), Gaps = 67/574 (11%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ C + K L I I+K G + + T L++++ K ++ EA +VF+ +
Sbjct: 50 LLELCTSLKELHQ---ILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKL 106
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
V + +++ GY +NS A+ + M P L +R G++IH
Sbjct: 107 DVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHG 166
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V+ + + ++ +LY+ C + A K F R+ +++++SW TV+ +NG A +
Sbjct: 167 MVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARR 226
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
++ +M G +P+ TL S+ + +LR+G +H + G+ + V +++
Sbjct: 227 AVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLD 286
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSK 378
Y KCG V A+ +F GMS N+V+WN MI G+AQ NG + EA + F K
Sbjct: 287 TYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQ------------NGESEEAFATFLK 334
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL--TLKTGFLSDVVVGTALVNMYKKC 436
+ G++P + L C+ L LE+G +H L K GF DV V +L++MY KC
Sbjct: 335 MLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF--DVSVMNSLISMYSKC 392
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
R++ A+ VF + +T+++W +MI G+A + ++AL LF +M ++P+ T V +
Sbjct: 393 KRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVI 452
Query: 497 AACSN-----------------------------------AGMVYEALGYFEMMQKEYKI 521
A ++ G + A F++MQ+ + I
Sbjct: 453 TALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVI 512
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD---FEPNEVIWSVFIAGCRRHGNMELGFY 578
+ +ID + G EA D +M +PNE+ + IA C G +E G Y
Sbjct: 513 T-----WNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMY 567
Query: 579 AAEQLLK---LKPKDCESYAMLLDIFVSAGRWED 609
E + + L+P + Y ++D+ AGR +D
Sbjct: 568 YFESMKENYGLEPT-MDHYGAMVDLLGRAGRLDD 600
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 5/291 (1%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG SE F L +L EG + S + L C N L +H + +
Sbjct: 322 NGESEE----AFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF 377
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D VM L+++Y KC ++ A VF NL VV+W ++I GY QN A+++F +M
Sbjct: 378 DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQ 437
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
P + TL + +TA + L R K IH ++ + + V +L ++ CG++
Sbjct: 438 SHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQ 497
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+A K F+ ++E++V++W +I G NG + L F++M + ++PNE T S+ + C
Sbjct: 498 TARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACS 557
Query: 288 TMLSLRVGA-QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ G S+ G + +++ L + G +D+A K M
Sbjct: 558 HSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDM 608
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/702 (34%), Positives = 391/702 (55%), Gaps = 20/702 (2%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL + E G + + SLL C + L + +H++++K G D+ L++
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG++E A +F+ R NVV W ++ Y Q S + +F M G +P T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFT 348
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L C+ I LG+QIH+ +K E D V L +YS G L+ A K +
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLE 408
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++V+SWT++I ++ + L F +M G+ P+ L S +S C + ++R G Q
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H+ GYA+++ + N+++ LY +CG +EA LF + H + +TWN +I+G Q
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSR- 527
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
L K +AL +F K+ +G K +++TF S ++ + L ++QG+Q+H +KT
Sbjct: 528 LYK----------QALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT 577
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G S+ V AL+++Y KCG IE A +F EMS R +SW ++IT + H +AL LF
Sbjct: 578 GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLF 637
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
+ M G++PN VTF+G LAACS+ G+V E L YF+ M Y + P+ DHY C++D+ R
Sbjct: 638 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGR 697
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G ++ A F+ +M N +IW ++ C+ H N+E+G AA+ LL+L+P D SY +L
Sbjct: 698 AGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLL 757
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+ + G+W + V+ + ++ + + SWI +K+ V++F D LHP S +I+K L
Sbjct: 758 SNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Query: 658 DELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
EL ++ GYKQ+ E ++ + HSEKLA+AFGL+ P P+ V+K+
Sbjct: 818 SELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNL 877
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+++K + +T REI++RD R H F +G C+C D+
Sbjct: 878 RVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSCSCGDY 919
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 158/516 (30%), Positives = 266/516 (51%), Gaps = 19/516 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C K + +IHA + K + FV L+ +Y G+ + A++VF ++
Sbjct: 149 SVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFC 208
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ V++ +LISG+ Q E A+ +F +M +G P VT+ + L AC+S+ ++ GKQ+H
Sbjct: 209 DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLH 268
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+Y++K D SL LY CG + +A FN NV+ W ++ A G+ +
Sbjct: 269 SYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLA 328
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ F +M + GI PN+FT I C + +G Q+HSL IK G+ S++ V ++
Sbjct: 329 KSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLI 388
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K G +D+A+K+ + + ++V+W +MIAG+ Q H+ EAL+ F +
Sbjct: 389 DMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQ-----------HDFCEEALATFKE 437
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+ PD +S + C+ + A+ QG QIHA +G+ +D+ + LVN+Y +CGR
Sbjct: 438 MQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGR 497
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
E A +F E+ + I+W +I+GF L QAL +F M AG + N TF+ A++A
Sbjct: 498 SEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+N + + ++ + K + + LI ++ + G IE+A +M N
Sbjct: 558 LANLADIKQGK---QVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLR-N 613
Query: 557 EVIWSVFIAGCRRHGN--MELGFYAAEQLLKLKPKD 590
EV W+ I C +HG L + + LKP D
Sbjct: 614 EVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPND 649
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 276/534 (51%), Gaps = 23/534 (4%)
Query: 36 SYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI 95
S RS +K I + N E + SL +A + + ++ LQ C R + +
Sbjct: 9 SLHRSLAKFI-VPDNPEKILSLVAAKA----SHHRALGSADLTCALQACRGRGNRWPLVL 63
Query: 96 -IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IHA V G D + L+++Y K G + +A++VF L + VSW +++SGY Q+
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ A ++ M PT L + L+AC+ + G+ IHA V K +T VGN
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +LY GS A + F + + +++ T+I + G L+ F +M G++P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ T+ S+ + C ++ L+ G Q+HS +K G + + S++ LY+KCG ++ A +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ N+V WN M+ + Q+ DLAK + IF ++ ++G+ P+ +T+ I
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAK-----------SFEIFGQMQATGIHPNQFTYPCI 352
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L C+ +E GEQIH+L++K GF SD+ V L++MY K G +++A ++ + R +
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDV 412
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SWTSMI G+ H +AL F++M GV P+ + A +AC+ + + L ++
Sbjct: 413 VSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL---QI 469
Query: 515 MQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ Y D + L++++ R G EEAF ++++ + +E+ W+ I+G
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHK-DEITWNGLISG 522
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 197/403 (48%), Gaps = 25/403 (6%)
Query: 177 TLGTALTACSSLESIR-------LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
LG+A C+ L++ R L +IHA V D +GN L LY+ G + A
Sbjct: 39 ALGSADLTCA-LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQA 97
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F + ++ +SW ++ ++G + R +S+M + P + L+S+ S C
Sbjct: 98 RQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKG 157
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
G +H+ K + S V N+++ LYL G A+++F M + VT+N +I
Sbjct: 158 KLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLI 217
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+GHAQ G AL IF ++ SG++PD T +S+L C+ + L++G+Q
Sbjct: 218 SGHAQC-----------GHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H+ LK G D + +L+++Y KCG IE A +F ++ W M+ + S
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
++ ++F M G+ PNQ T+ L C+ G + LG ++ K D Y+
Sbjct: 327 LAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI--ELGE-QIHSLSIKNGFESDMYV 383
Query: 530 --CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
LIDM+ + GC+++A ++ ++ + + V W+ IAG +H
Sbjct: 384 SGVLIDMYSKYGCLDKARKILEMLE-KRDVVSWTSMIAGYVQH 425
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+++AL V + G K +++S + N + + +H VKTG + V
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++YGKCG++E+A+ +F + N VSW ++I+ Q+ + A+ +F M + G P
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT L ACS + + G + +++ + N + Y+ + +
Sbjct: 649 DVTFIGVLAACSHVGLVEEG------LSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLD 702
Query: 235 RIRE--------KNVMSWTTVIGAC 251
R R N M W T++ AC
Sbjct: 703 RARRFVDEMPITANAMIWRTLLSAC 727
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 240/729 (32%), Positives = 397/729 (54%), Gaps = 21/729 (2%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
+ +TVS+ S ++ + S V+ G ++ G + + ++ C + L
Sbjct: 164 ERNTVSWNGLMSAYVKNDRCSHAVKVFG-----EMVWGGVQPNEFGFSCVVNACTGSRDL 218
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+HA +++TG +D F LV++Y K G++ A VF +P +VVSW + ISG
Sbjct: 219 EAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGC 278
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
V + + A+ + L M +G P TL + L AC+ + LG+QIH ++VK + D
Sbjct: 279 VLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDN 338
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
+ L +Y+ G L+ A K F+ I +++++ W +I C + + L F +M E
Sbjct: 339 YIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKE 398
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G N TL ++ ++ ++ QVH+L KLG+ S+ V N ++ Y KC ++ A
Sbjct: 399 GFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYA 458
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
++F+ +++ + +MI LS + G +A+ +F ++ G+ PD +
Sbjct: 459 YRVFEKHGSYDIIAFTSMITA-----------LSQCDHGEDAIKLFMEMLRKGLDPDPFV 507
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
SS+L C+ L A EQG+Q+HA +K F+SDV G ALV Y KCG IE A F +
Sbjct: 508 LSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP 567
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+ ++SW++MI G A H +AL +F M+ + PN +T L AC++AG+V EA
Sbjct: 568 EKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKR 627
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YF M++ + I+ +HY C+ID+ R G +++A + + M F+ N +W +A R H
Sbjct: 628 YFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+ ELG AAE+L L+P+ ++ +L + + SAG W+DVA V+ L ++ K+ + SW
Sbjct: 688 RDPELGRLAAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSW 747
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
+ +KDKV++F D HP++ +I+ LDEL + GY +L D +E
Sbjct: 748 VELKDKVHTFIVGDKSHPRARDIYAKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLS 807
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
+HSE+LA+AF L++TP +PI V K+ +CRDCH K I+ + +REII+RD R H F
Sbjct: 808 HHSERLAVAFALISTPAGAPIRVKKNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFR 867
Query: 746 NGHCTCRDF 754
+G C+CRD+
Sbjct: 868 DGACSCRDY 876
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 225/474 (47%), Gaps = 22/474 (4%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL +SL IHAH++K+G F L++ Y KC A++VFD +P
Sbjct: 10 LLTRYAATQSLLQGAHIHAHLLKSGLFAVF--RNHLLSFYSKCRLPGSARRVFDEIPDPC 67
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VSW+SL++ Y N+ P A+ F M L L C+ G Q+HA
Sbjct: 68 HVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAP--DAGFGTQLHA 124
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGEAV 258
+ D V N+L ++Y G ++ A F+ E+N +SW ++ A +N
Sbjct: 125 LAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCS 184
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
++ F +M+ G+QPNEF + + + C L G +VH++ I+ GY ++ N+++
Sbjct: 185 HAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALV 244
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K G + A +F + ++V+WNA I+G H AL + +
Sbjct: 245 DMYSKLGDIRMAAVVFGKVPETDVVSWNAFISG-----------CVLHGHDQHALELLLQ 293
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ SSG+ P+++T SSIL C+ A G QIH +K SD + LV+MY K G
Sbjct: 294 MKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGL 353
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A +VF + R L+ W ++I+G ++ + +AL LF M G N+ T L +
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
++ + + + + K+ + D ++ LID + + C+ A+ +K
Sbjct: 414 TASLEAISDTRQVHALAE---KLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEK 464
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 199/401 (49%), Gaps = 30/401 (7%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+G LT ++ +S+ G IHA+++K N L S YS C SA + F+ I
Sbjct: 6 TIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEI 63
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+ +SW++++ A N L F M S ++ NEF L + C G
Sbjct: 64 PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF--GT 120
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQM 355
Q+H+L + G ++ V N+++ +Y G VDEA+ +FD N V+WN +++ +
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY--- 177
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
K+D +H A+ +F ++ G++P+ + FS ++ C+ LE G ++HA+ +
Sbjct: 178 ---VKNDRCSH-----AVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVI 229
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+TG+ DV ALV+MY K G I A+ VF ++ ++SW + I+G H AL+
Sbjct: 230 RTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALE 289
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LID 533
L M +G+ PN T L AC+ +G M K D+Y+ L+D
Sbjct: 290 LLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFM---VKANADSDNYIAFGLVD 346
Query: 534 MFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
M+ + G +++A FD+I + D V+W+ I+GC HG
Sbjct: 347 MYAKHGLLDDAKKVFDWIPQRDL----VLWNALISGC-SHG 382
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 109/275 (39%), Gaps = 39/275 (14%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L T +LT + +L QG IHA LK+G + V L++ Y KC A RVF
Sbjct: 4 LETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSARRVFD 61
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM--- 504
E+ +SW+S++T ++N+++ AL F M VR N+ L +AG
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAGFGTQ 121
Query: 505 ----------------------VYEALGYFE---MMQKEYKIKPVMDHYMCLIDMFVRLG 539
+Y G+ + M+ E + + L+ +V+
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181
Query: 540 CIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESYA 595
A +M +PNE +S + C ++E G +++ KD +
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
L+D++ G AVV K+ ETD SW
Sbjct: 242 ALVDMYSKLGDIRMAAVVFG-----KVPETDVVSW 271
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/681 (35%), Positives = 383/681 (56%), Gaps = 16/681 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + L+ + +H++++K G D+ + L+++Y KCG + EA ++F + R
Sbjct: 249 SLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT 308
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV W ++ Y Q S + +F M+ AG P T L C+ I LG+QIH
Sbjct: 309 NVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIH 368
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+K E D V L +YS G L+ A + + K+V+SWT++I ++
Sbjct: 369 LLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCK 428
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F M GI P+ L S S C + ++R G Q+HS GY++++ + N+++
Sbjct: 429 EALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALV 488
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG EA LF+ + H + +TWN M++G AQ EAL +F K
Sbjct: 489 NLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQ-----------SGLYEEALEVFIK 537
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ +G+K +++TF S ++ + L ++QG+QIHA +KTG S+ V AL+++Y KCG
Sbjct: 538 MYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGS 597
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A F EMS R +SW ++IT + H +AL LF+ M G++PN VTF+G LAA
Sbjct: 598 IEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAA 657
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E LGYF+ M E+ I P DHY C++D+ R G ++ A F+++M N +
Sbjct: 658 CSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAM 717
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR H N+E+G AA+ LL+L+P D SY +L + + G+W V+ + +
Sbjct: 718 VWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMK 777
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF--- 675
+ + + SWI +K+ V++F D LHP + +I+K L +L ++ GY Q F
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFH 837
Query: 676 --ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
E ++ + HSEKLA+AFGL++ P P+ V+K+ +C DCH ++K + + REI
Sbjct: 838 EKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREI 897
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
++RD R H F NG+C+C DF
Sbjct: 898 VLRDVYRFHHFNNGNCSCGDF 918
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 278/549 (50%), Gaps = 27/549 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG E L Q S + P V +S +L C ++HA + K GS
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSS----VLSACTKAALFEQGRLVHAQVYKQGSCS 176
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ V L+ +Y + G++ A++VF +P + V++ +LIS + Q E A+ +F +M
Sbjct: 177 ETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMR 236
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+G P VT+ + L AC+S+ + GKQ+H+Y++K D + SL LY CG +
Sbjct: 237 LSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIV 296
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A++ F NV+ W ++ A G+ + + F +M++ G++PNEFT + C
Sbjct: 297 EALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCT 356
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ +G Q+H L IK G+ S++ V ++ +Y K G +D+A+++ + + ++V+W +
Sbjct: 357 YAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTS 416
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MIAG+ Q H EAL F + G+ PD +S ++ C+ + A+ QG
Sbjct: 417 MIAGYVQ-----------HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQG 465
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
+QIH+ +G+ +DV + ALVN+Y +CGR + A +F + + I+W M++GFA
Sbjct: 466 QQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQS 525
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
L +AL++F M AGV+ N TFV +++A +N + + + K +
Sbjct: 526 GLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEV 584
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDF----EPNEVIWSVFIAGCRRHG-NME-LGFYAAE 581
LI ++ + G IE+A KM F E N V W+ I C +HG +E L +
Sbjct: 585 ANALISLYGKCGSIEDA-----KMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQM 639
Query: 582 QLLKLKPKD 590
+ LKP D
Sbjct: 640 KQEGLKPND 648
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 266/504 (52%), Gaps = 24/504 (4%)
Query: 77 YVSLLQECVNR-KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ L+EC K +IHA + G +D L+++Y K G ++ A++VF+ L
Sbjct: 44 FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ VSW +++SGY +N E A+ ++ M +G PT L + L+AC+ G+
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA V K + +T VGN+L +LY GSL+ A + F+ + + +++ T+I + G
Sbjct: 164 LVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCG 223
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
L F +M G P+ T+ S+ + C ++ L G Q+HS +K G + + +
Sbjct: 224 NGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEG 283
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ LY+KCG++ EA ++F N+V WN M+ + Q+ DLAK + +
Sbjct: 284 SLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAK-----------SFDL 332
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ ++G++P+ +T+ +L C+ + GEQIH L++KTGF SD+ V L++MY K
Sbjct: 333 FCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSK 392
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
G +++A R+ + + ++SWTSMI G+ H +AL+ F+DM L G+ P+ + A
Sbjct: 393 YGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASA 452
Query: 496 LAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
++AC+ G + Y + I + L++++ R G +EAF +
Sbjct: 453 ISACAGIKAMRQGQQIHSRVYVSGYSADVSI------WNALVNLYARCGRSKEAFSLFEA 506
Query: 551 MDFEPNEVIWSVFIAGCRRHGNME 574
++ + +++ W+ ++G + G E
Sbjct: 507 IEHK-DKITWNGMVSGFAQSGLYE 529
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 212/401 (52%), Gaps = 21/401 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ G + +Y LL+ C ++ E IH +KTG D +V L+++Y K G
Sbjct: 336 MVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGW 395
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+++A+++ + L +VVSWTS+I+GYVQ+ + A+ F DM G +P N+ L +A++A
Sbjct: 396 LDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISA 455
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ ++++R G+QIH+ V D S+ N+L +LY+ CG A F I K+ ++W
Sbjct: 456 CAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITW 515
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++ ++G + L F KM G++ N FT S S + ++ G Q+H+ IK
Sbjct: 516 NGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIK 575
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G S V N+++ LY KCG +++A+ F MS N V+WN +I +Q
Sbjct: 576 TGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQ---------- 625
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDV 423
H G EAL +F ++ G+KP+ TF +L CS + +E+G +++ + G
Sbjct: 626 -HGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRP 684
Query: 424 VVGTALVNMYKKCGRIERASRVFVE--------MSTRTLIS 456
+V++ + G+++RA R FVE M RTL+S
Sbjct: 685 DHYACVVDILGRAGQLDRA-RKFVEEMPVSANAMVWRTLLS 724
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/750 (34%), Positives = 415/750 (55%), Gaps = 87/750 (11%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ Y LL+ C + K IH HI+K + + F++ LV+ Y K + A++VFD
Sbjct: 15 SNHYCELLKHCRDTKK------IHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFD 68
Query: 134 NLPRINVVSWTSLISGYVQNS-QPEL------------------------------AIHV 162
+P+ N+ SW +L+S Y + + PE+ ++
Sbjct: 69 QMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKA 128
Query: 163 FLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
+ ML G + N + L T L S + LG Q+H +VVK+ + VG+ L +YS
Sbjct: 129 YNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYS 188
Query: 222 TCGSLNSAIKAFNRIREKNV-------------------------------MSWTTVIGA 250
G + A +AF+ + EKNV +SWT +I
Sbjct: 189 KTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAG 248
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG + + F +M E ++ +++T S+ + CG +++L+ G QVH+ I+ Y N
Sbjct: 249 FTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDN 308
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
+ V ++++ +Y KC + A+ +F M+ N+V+W AM+ G+ Q NG
Sbjct: 309 IFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQ------------NGYS 356
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ IF + ++G++PD +T S+++ C+ L +LE+G Q H L +G +S + V AL
Sbjct: 357 EEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL 416
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V +Y KCG IE + R+F EMS +SWT++++G+A +++ L+LFE ML G +P++
Sbjct: 417 VTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDK 476
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VTF+G L+ACS AG+V + FE M KE++I P+ DHY C+ID+F R G +EEA FI
Sbjct: 477 VTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFIN 536
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
KM F P+ + W+ ++ CR H NME+G +AAE LLKL+P + SY +L I+ + G+WE+
Sbjct: 537 KMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEE 596
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
VA ++ R++ L + SWI+ K++V+ F +D +P S +I+ L++L K GY
Sbjct: 597 VANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGY 656
Query: 670 KQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
+ L D ++S + +HSEKLAIAFGL+ P PI VVK+ +C DCHN K
Sbjct: 657 VPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKY 716
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REI+VRD+ R H F +G C+C DF
Sbjct: 717 ISKITQREILVRDAARFHLFKDGRCSCGDF 746
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 152/285 (53%), Gaps = 2/285 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E ++ ++ S+L C +L + +HA+I++T + FV + LV++Y KC +++
Sbjct: 268 ENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKS 327
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + NVVSWT+++ GY QN E A+ +F DM G P + TLG+ +++C++
Sbjct: 328 AETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCAN 387
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ G Q H + +V N+L +LY CGS+ + + F+ + + +SWT +
Sbjct: 388 LASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTAL 447
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + G+A + LR F ML+ G +P++ T + S C ++ G Q+ IK
Sbjct: 448 VSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHR 507
Query: 308 ASNLRVRNSIMY-LYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIA 350
+ + M L+ + G ++EA+K + M + + W ++++
Sbjct: 508 IIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLS 552
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 153/353 (43%), Gaps = 57/353 (16%)
Query: 276 EFTLTSISS-VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+F S+S+ C + R ++H IK + + N+++ Y K + A+++F
Sbjct: 8 QFNSMSLSNHYCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVF 67
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS------------ 382
D M NL +WN +++ ++++ L + + H T + ++ L S+
Sbjct: 68 DQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVK 127
Query: 383 ---------GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ S++L + S+ + G Q+H +K GF S V VG+ LV+MY
Sbjct: 128 AYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMY 187
Query: 434 KK-------------------------------CGRIERASRVFVEMSTRTLISWTSMIT 462
K C RIE + ++F +M + ISWT+MI
Sbjct: 188 SKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIA 247
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKI 521
GF + L +A+ LF +M L + +Q TF L AC + E + +++ +Y+
Sbjct: 248 GFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQD 307
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ L+DM+ + I+ A +KM+ + N V W+ + G ++G E
Sbjct: 308 NIFVGS--ALVDMYCKCKSIKSAETVFRKMNCK-NVVSWTAMLVGYGQNGYSE 357
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/687 (36%), Positives = 398/687 (57%), Gaps = 22/687 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V +L V L E IHA ++K+ V L+N+Y K G + A+K F N P
Sbjct: 898 VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPE 957
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ESIRLG 194
++++SW ++IS Y QN+ AI F D+L G P TL + L ACS+ E LG
Sbjct: 958 LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+H Y +K +D+ V +L LYS G ++ A + + ++ SW ++ ++
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
++ + L FS M GI +E TL + G +++L+ G Q+ + IKLG+ ++L V
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS 1137
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ ++ +Y+KCG + A +LF +S + V W MI+G+ + NG + AL
Sbjct: 1138 SGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIE------------NGDEDHAL 1185
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
S++ + SG++PD YTF++++ S L ALEQG+QIHA +K + D VGT+LV+MY
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMY 1245
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG ++ A RVF +M R ++ W +M+ G A H +AL LF M G++P++VTF+
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFI 1305
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+ EA YF+ M K Y I P ++HY CL+D R G I+EA + I M F
Sbjct: 1306 GVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPF 1365
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ + ++ + CR G+ E A++LL L P D +Y +L +I+ ++ +W+DV
Sbjct: 1366 KASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDA 1425
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG-YKQQ 672
+N+ + + + + +SWI +K+KV+ F +D HPQ++ I++ +++L+++ + G Y
Sbjct: 1426 RNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPD 1485
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
F L D +E A YHSEKLAIAFGL++TP + I V+K+ +C DCH+ IK I+
Sbjct: 1486 TDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISK 1545
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
LT REI++RD+ R H F NG C+C D+
Sbjct: 1546 LTQREIVLRDANRFHHFRNGTCSCGDY 1572
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 213/472 (45%), Gaps = 56/472 (11%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA IV +G D ++ L+ +Y KCG++ A++VFD ++V+W S+++ Y Q +
Sbjct: 634 HARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADS 693
Query: 157 EL-----AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+F + E G T +TL L C +++ + +H Y VK E D
Sbjct: 694 SYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLF 753
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V +L ++Y G + A F+++ E++ + W ++ A EN + LRFFS G
Sbjct: 754 VSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSG 813
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
P+ +++ V G G+ ++N + + Y A
Sbjct: 814 FFPD---FSNLHCVIG--------------GVNSDVSNNRKRHAEQVKAY--------AM 848
Query: 332 KLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
K+F N+ WN + HA + A+ F L S + D
Sbjct: 849 KMFPFDQGSNIFAWNKKLTEFLHAGQI-------------VAAIDCFKTLLRSTIGHDSV 895
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T IL+ L+ GEQIHAL +K+ F V V +L+NMY K G + A + F+
Sbjct: 896 TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
LISW +MI+ +A ++L +A+ F D+L G++P+Q T L ACS +
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG----DEG 1011
Query: 510 GYFEMMQK--EYKIK--PVMDHYM--CLIDMFVRLGCIEEA-FDFIKKMDFE 554
YF + + Y IK + D ++ LID++ + G ++EA F K DF+
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFD 1063
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ +L++ +L + IHA++VK D FV T LV++Y KCG++++A
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDA 1254
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+VF + VV W +++ G Q+ + A+++F M G P VT L+ACS
Sbjct: 1255 YRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSH- 1313
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMS---- 243
+ + KY + G + + +C L A+ RI+E +NV++
Sbjct: 1314 ------SGLFSEAYKYFDAMFKTYGITPEIEHYSC--LVDALGRAGRIQEAENVIASMPF 1365
Query: 244 ------WTTVIGACGENGEAVQGLRFFSKMLS 269
+ ++GAC G+A R K+L+
Sbjct: 1366 KASASMYRALLGACRTKGDAETAKRVADKLLA 1397
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 249/687 (36%), Positives = 398/687 (57%), Gaps = 22/687 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V +L V L E IHA ++K+ V L+N+Y K G + A+K F N P
Sbjct: 898 VIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPE 957
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ESIRLG 194
++++SW ++IS Y QN+ AI F D+L G P TL + L ACS+ E LG
Sbjct: 958 LDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLG 1017
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+H Y +K +D+ V +L LYS G ++ A + + ++ SW ++ ++
Sbjct: 1018 SQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKS 1077
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
++ + L FS M GI +E TL + G +++L+ G Q+ + IKLG+ ++L V
Sbjct: 1078 NKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVS 1137
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ ++ +Y+KCG + A +LF +S + V W MI+G+ + NG + AL
Sbjct: 1138 SGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIE------------NGDEDHAL 1185
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
S++ + SG++PD YTF++++ S L ALEQG+QIHA +K + D VGT+LV+MY
Sbjct: 1186 SVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMY 1245
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG ++ A RVF +M R ++ W +M+ G A H +AL LF M G++P++VTF+
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFI 1305
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+ EA YF+ M K Y I P ++HY CL+D R G I+EA + I M F
Sbjct: 1306 GVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPF 1365
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ + ++ + CR G+ E A++LL L P D +Y +L +I+ ++ +W+DV
Sbjct: 1366 KASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDA 1425
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG-YKQQ 672
+N+ + + + + +SWI +K+KV+ F +D HPQ++ I++ +++L+++ + G Y
Sbjct: 1426 RNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPD 1485
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
F L D +E A YHSEKLAIAFGL++TP + I V+K+ +C DCH+ IK I+
Sbjct: 1486 TDFTLLDVEEEEKERALYYHSEKLAIAFGLISTPPSATIRVIKNLRVCGDCHSAIKCISK 1545
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
LT REI++RD+ R H F NG C+C D+
Sbjct: 1546 LTQREIVLRDANRFHHFRNGTCSCGDY 1572
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 213/472 (45%), Gaps = 56/472 (11%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA IV +G D ++ L+ +Y KCG++ A++VFD ++V+W S+++ Y Q +
Sbjct: 634 HARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQFADS 693
Query: 157 EL-----AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+F + E G T +TL L C +++ + +H Y VK E D
Sbjct: 694 SYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLF 753
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V +L ++Y G + A F+++ E++ + W ++ A EN + LRFFS G
Sbjct: 754 VSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSG 813
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
P+ +++ V G G+ ++N + + Y A
Sbjct: 814 FXPD---FSNLHCVIG--------------GVNSDVSNNRKRHAEQVKAY--------AM 848
Query: 332 KLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
K+F N+ WN + HA + A+ F L S + D
Sbjct: 849 KMFPFDQGSNIFAWNKKLTEFLHAGQI-------------VAAIDCFKTLLRSTIGHDSV 895
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T IL+ L+ GEQIHAL +K+ F V V +L+NMY K G + A + F+
Sbjct: 896 TLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINS 955
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
LISW +MI+ +A ++L +A+ F D+L G++P+Q T L ACS +
Sbjct: 956 PELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG----DEG 1011
Query: 510 GYFEMMQK--EYKIK--PVMDHYM--CLIDMFVRLGCIEEA-FDFIKKMDFE 554
YF + + Y IK + D ++ LID++ + G ++EA F K DF+
Sbjct: 1012 EYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFD 1063
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ +L++ +L + IHA++VK D FV T LV++Y KCG++++A
Sbjct: 1195 GVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDA 1254
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+VF + VV W +++ G Q+ + A+++F M G P VT L+ACS
Sbjct: 1255 YRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSH- 1313
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMS---- 243
+ + KY + G + + +C L A+ RI+E +NV++
Sbjct: 1314 ------SGLFSEAYKYFDAMFKTYGITPEIEHYSC--LVDALGRAGRIQEAENVIASMPF 1365
Query: 244 ------WTTVIGACGENGEAVQGLRFFSKMLS 269
+ ++GAC G+A R K+L+
Sbjct: 1366 KASASMYRALLGACRTKGDAETAKRVADKLLA 1397
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 388/690 (56%), Gaps = 19/690 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V +Y LL+ C + L + IH +VK+G D F MT L N+Y KC + EA+
Sbjct: 133 PVVYNFTY--LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
KVFD +P ++VSW ++++GY QN +A+ + M E P+ +T+ + L A S+L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
I +GK+IH Y ++ + ++ +L +Y+ CGSL +A + F+ + E+NV+SW ++I
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A +N + + F KML EG++P + ++ C + L G +H L ++LG
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
N+ V NS++ +Y KC VD A +F + LV+WNAMI G AQ NG
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ------------NGR 418
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL+ FS++ S +KPD +T+ S++T + L + IH + +++ +V V TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG I A +F MS R + +W +MI G+ H AL+LFE+M ++PN
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+ ++ACS++G+V L F MM++ Y I+ MDHY ++D+ R G + EA+DFI
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+M +P ++ + C+ H N+ AAE+L +L P D + +L +I+ +A WE
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V V+ + L +T S + IK++V+SF HP S +I+ L++L+ K G
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Query: 669 YKQQESFELTDE----ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
Y + L E E HSEKLAI+FGLLNT + I V K+ +C DCHN K
Sbjct: 719 YVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REI+VRD +R H F NG C+C D+
Sbjct: 779 ISLVTGREIVVRDMQRFHHFKNGACSCGDY 808
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 259/512 (50%), Gaps = 20/512 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRI 138
LL+ C + K L I + K G +Q+ F T LV+++ + G+++EA +VF+ + ++
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NV+ + +++ G+ + S + A+ F+ M P L C +R+GK+IH
Sbjct: 100 NVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+VK D L ++Y+ C +N A K F+R+ E++++SW T++ +NG A
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L M E ++P+ T+ S+ + + VG ++H ++ G+ S + + +++
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG ++ A++LFDGM N+V+WN+MI + Q + EA+ IF K
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ-----------NENPKEAMLIFQK 327
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+KP + L C+ L LE+G IH L+++ G +V V +L++MY KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A+ +F ++ +RTL+SW +MI GFA + AL F M V+P+ T+V + A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
+ + + A ++ + K V L+DM+ + G I A I M E +
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFV-TTALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
W+ I G HG + E++ K +KP
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 232/454 (51%), Gaps = 25/454 (5%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ E K + VS+L + +S + IH + +++G + T LV++Y KCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++E A+++FD + NVVSW S+I YVQN P+ A+ +F ML+ G PT+V++ AL
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ L + G+ IH V+ + + SV NSL S+Y C +++A F +++ + ++S
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +I +NG + L +FS+M S ++P+ FT S+ + + +H + +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ N+ V +++ +Y KCG + A+ +FD MS ++ TWNAMI G+
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG---------- 515
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
H G AL +F ++ +KP+ TF S+++ CS +E G + + +K + ++
Sbjct: 516 -THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM-MKENYSIEL 573
Query: 424 VVG--TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG----FANHSLSHQALQ-L 476
+ A+V++ + GR+ A ++M + ++ + G N + + +A + L
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
FE + P+ + LA A ++E +G
Sbjct: 634 FE------LNPDDGGYHVLLANIYRAASMWEKVG 661
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 212/429 (49%), Gaps = 24/429 (5%)
Query: 167 LEAGNY-PTNVTLGTA---LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
L NY P NV A L CSSL+ +R QI V K + L SL+
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
GS++ A + F I K + + T++ + + + L+FF +M + ++P + T +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
VCG LRVG ++H L +K G++ +L + +Y KC V+EA+K+FD M +L
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WN ++AG++Q NG AL + + +KP T S+L S L
Sbjct: 202 VSWNTIVAGYSQ------------NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
+ G++IH +++GF S V + TALV+MY KCG +E A ++F M R ++SW SMI
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ + +A+ +F+ ML GV+P V+ +GAL AC++ G + E + + E +
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL-ERGRFIHKLSVELGL 368
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM--ELGFYA 579
+ LI M+ + ++ A K+ V W+ I G ++G L +++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 580 AEQLLKLKP 588
+ +KP
Sbjct: 428 QMRSRTVKP 436
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 466 bits (1199), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/692 (33%), Positives = 403/692 (58%), Gaps = 20/692 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
GP ++T + SLL+ C R L+ +HA + G + T L N+Y KC +A
Sbjct: 222 GPVLRT--FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTNVTLGTALTACSS 187
++VFD +P + V+W +L++GY +N E A+ + + M E G P VTL + L AC+
Sbjct: 280 RRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACAD 339
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+++ +++HA+ V+ ++ +V ++ +Y CG+++SA K F+ ++++N +SW +
Sbjct: 340 AQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAM 399
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I ENG+A + L F +M+ EG+ + ++ + CG + L G +VH L +++G
Sbjct: 400 IKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGL 459
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
SN+ V N+++ +Y KC D A ++FD + + V+WNAMI G Q N
Sbjct: 460 ESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQ------------N 507
Query: 368 GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +E A+ +FS++ +KPD +T SI+ + + Q IH +++ DV V
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVL 567
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TAL++MY KCGR+ A +F R +I+W +MI G+ +H A++LFE+M +G
Sbjct: 568 TALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV 627
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+ TF+ L+ACS+AG+V E YF M+++Y ++P M+HY ++D+ R G + EA+
Sbjct: 628 PNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWS 687
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI+KM EP ++ + C+ H N+EL +A+++ +L+P++ + +L +I+ +A
Sbjct: 688 FIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASL 747
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W+DVA V+ ++ L +T WS +++K+++++F H Q+ +I+ L +L+E+ K
Sbjct: 748 WKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKA 807
Query: 667 FGYKQQES--FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY ++ D+ A + HSEKLAIA+GL+ T + I + K+ +C+DCHN
Sbjct: 808 VGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNAT 867
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ +T REII+RD +R H F +G C+C D+
Sbjct: 868 KLISLVTGREIIMRDIQRFHHFKDGKCSCGDY 899
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 182/342 (53%), Gaps = 11/342 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + + VS+L C + ++L +HA V+ G + V T +++VY KCG ++
Sbjct: 321 DGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDS 380
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+KVFD + N VSW ++I GY +N A+ +F M+ G T+V++ AL AC
Sbjct: 381 ARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGE 440
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + G+++H +V+ E + +V N+L ++Y C + A + F+ + K +SW +
Sbjct: 441 LGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAM 500
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I C +NG + +R FS+M E ++P+ FTL SI + +H I+L
Sbjct: 501 ILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHL 560
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ V +++ +Y KCG V A+ LF+ +++TWNAMI G+ +H
Sbjct: 561 DQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYG-----------SHG 609
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G A+ +F ++ SSG P+ TF S+L+ CS +++G++
Sbjct: 610 SGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 19/429 (4%)
Query: 159 AIHVFLDMLEA-GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
A+ F M A G+ P T + L C++ + G+ +HA + + +L
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNE 276
++Y+ C A + F+R+ ++ ++W ++ NG A + +M E G +P+
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
TL S+ C +L +VH+ ++ G+ + V +I+ +Y KCG VD A+K+FDG
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M N V+WNAMI G+A+ D TEAL++F ++ G+ + + L
Sbjct: 388 MQDRNSVSWNAMIKGYAENGD-----------ATEALALFKRMVGEGVDVTDVSVLAALH 436
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C L L++G ++H L ++ G S+V V AL+ MY KC R + A++VF E+ +T +S
Sbjct: 437 ACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVS 496
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W +MI G + S A++LF M L V+P+ T V + A ++ + + L +
Sbjct: 497 WNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALAD---ISDPLQARWIHG 553
Query: 517 KEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
++ D Y+ LIDM+ + G + A + + + W+ I G HG+ +
Sbjct: 554 YSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSAR-DRHVITWNAMIHGYGSHGSGK 612
Query: 575 LGFYAAEQL 583
+ E++
Sbjct: 613 VAVELFEEM 621
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 158/330 (47%), Gaps = 18/330 (5%)
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
F + + G P T TS+ +C L G VH+ G + ++ +Y
Sbjct: 212 FAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYA 271
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL--SIFSKLN 380
KC +A+++FD M + V WNA++AG+A+ NG EA +
Sbjct: 272 KCRRPGDARRVFDRMPARDRVAWNALVAGYAR------------NGLAEAAVGMVVRMQE 319
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G +PD T S+L C+ AL ++HA ++ GF V V TA++++Y KCG ++
Sbjct: 320 EDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVD 379
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A +VF M R +SW +MI G+A + + +AL LF+ M+ GV V+ + AL AC
Sbjct: 380 SARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACG 439
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
G + E E++ + ++ ++ LI M+ + + A ++ ++ V W
Sbjct: 440 ELGFLDEGRRVHELLVR-IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYK-TRVSW 497
Query: 561 SVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
+ I GC ++G+ E + ++ QL +KP
Sbjct: 498 NAMILGCTQNGSSEDAVRLFSRMQLENVKP 527
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 251/706 (35%), Positives = 390/706 (55%), Gaps = 23/706 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
QEA S+ + G ++Y+S+L + +L + +H H K G D V
Sbjct: 214 QEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGN 273
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+++Y KCG++++A+ VFD + +V+SW ++I G QN A +FL M + G P
Sbjct: 274 ALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVP 333
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ T + L S + K++H + V+ D VG++ +Y CGS++ A F
Sbjct: 334 DSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIF 393
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+++ +NV +W +IG + + L F +M EG P+ T +I S +L
Sbjct: 394 DKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALE 453
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+VHS I G +LRV N+++++Y KCG A+++FD M N+ TW MI+G A
Sbjct: 454 WVKEVHSYAIDAGLV-DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLA 512
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q H G EA S+F ++ G+ PD T+ SIL+ C+ ALE +++H+
Sbjct: 513 Q-----------HGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSH 561
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ G +SD+ VG ALV+MY KCG ++ A RVF +M R + SWT MI G A H A
Sbjct: 562 AVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDA 621
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L LF M L G +PN +FV L+ACS+AG+V E F + ++Y I+P M+HY C++D
Sbjct: 622 LDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVD 681
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +EEA FI M EP + W + C +GN+E+ +AA++ LKLKPK +
Sbjct: 682 LLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAST 741
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +L +I+ + G WE +V+++ + + + SWI + ++++SF D HP+S EI
Sbjct: 742 YVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEI 801
Query: 654 FKVLDELVEKAKCFGYKQQESFEL--TDE---ESASVYHSEKLAIAFGLLNTPIVSPILV 708
+ L +L+++ K GY L TD+ E A HSEKLAI +GL++TP +PI V
Sbjct: 802 YAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRV 861
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K I+ +T REI+ RD+KR H F +G C+C D+
Sbjct: 862 YKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHFKDGVCSCGDY 907
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/553 (33%), Positives = 289/553 (52%), Gaps = 25/553 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + +Y+S+L+ C + SL + IHAHI+++G D V T LVN+Y KCG++++
Sbjct: 24 EGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDD 83
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ +FD + NV+SWT +I G + + A H FL M G P + T + L A +S
Sbjct: 84 AQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANAS 143
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ K++H++ V D VGN+L +Y+ GS++ A F+ + E+++ SWT +
Sbjct: 144 AGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVM 203
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI--SSVCGTMLSLRVGAQVHSLGIKL 305
IG ++G + F +M G PN T SI +S + +L +VH K
Sbjct: 204 IGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKA 263
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G+ S+LRV N+++++Y KCG +D+A+ +FDGM ++++WNAMI G AQ
Sbjct: 264 GFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQ----------- 312
Query: 366 HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG G EA +IF K+ G PD T+ S+L A E +++H ++ G +SD+
Sbjct: 313 -NGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLR 371
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+A V+MY +CG I+ A +F +++ R + +W +MI G A +AL LF M G
Sbjct: 372 VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIE 542
P+ TFV L+A N G EAL + + + ++D + L+ M+ + G
Sbjct: 432 FFPDATTFVNILSA--NVGE--EALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTM 487
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDI 600
A M E N W+V I+G +HG F Q+L+ + P D +Y +L
Sbjct: 488 YAKQVFDDM-VERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVP-DATTYVSILSA 545
Query: 601 FVSAGRWEDVAVV 613
S G E V V
Sbjct: 546 CASTGALEWVKEV 558
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 280/537 (52%), Gaps = 31/537 (5%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F L + EG + +YVS+L + +L + +H+H V G D V LV++
Sbjct: 116 FHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHM 175
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K G++++A+ VFD + ++ SWT +I G Q+ + + A +FL M G P T
Sbjct: 176 YAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTY 235
Query: 179 -----GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+A+T+ +LE + K++H + K D VGN+L +Y+ CGS++ A F
Sbjct: 236 LSILNASAITSTGALEWV---KEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + +++V+SW +IG +NG + F KM EG P+ T S+ + + +
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+VH +++G S+LRV ++ +++Y++CG +D+AQ +FD ++ N+ TWNAMI G A
Sbjct: 353 WVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVA 412
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q G EALS+F ++ G PD TF +IL+ ALE +++H+
Sbjct: 413 Q-----------QKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSY 461
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ G L D+ VG ALV+MY KCG A +VF +M R + +WT MI+G A H H+A
Sbjct: 462 AIDAG-LVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEA 520
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF-EMMQKEYKIKPVMDHYM--C 530
LF ML G+ P+ T+V L+AC++ G AL + E+ V D +
Sbjct: 521 FSLFLQMLREGIVPDATTYVSILSACASTG----ALEWVKEVHSHAVNAGLVSDLRVGNA 576
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
L+ M+ + G +++A M E + W+V I G +HG G A + +K+K
Sbjct: 577 LVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHGR---GLDALDLFVKMK 629
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 223/425 (52%), Gaps = 19/425 (4%)
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+I GY + E A+ V+ M G P +T + L AC S S++ GK+IHA++++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D V +L ++Y CGS++ A F+++ E+NV+SWT +IG G + F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M EG PN +T SI + + +L +VHS + G A +LRV N+++++Y K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+D+A+ +FDGM ++ +W MI G AQ H G EA S+F ++ G
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQ-----------HGRGQEAFSLFLQMERGGCL 229
Query: 386 PDLYTFSSIL--TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
P+L T+ SIL + + ALE +++H K GF+SD+ VG AL++MY KCG I+ A
Sbjct: 230 PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDAR 289
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
VF M R +ISW +MI G A + H+A +F M G P+ T++ L + G
Sbjct: 290 LVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTG 349
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+E + E+ + ++ V D + + M++R G I++A K+ N W+
Sbjct: 350 -AWEWVK--EVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWN 405
Query: 562 VFIAG 566
I G
Sbjct: 406 AMIGG 410
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F L +L EG ++YVS+L C + +L + +H+H V G D V LV++
Sbjct: 521 FSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHM 580
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG++++A++VFD++ +V SWT +I G Q+ + A+ +F+ M G P +
Sbjct: 581 YAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSF 640
Query: 179 GTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF--NR 235
L+ACS + G +Q + Y E + L G L A K F N
Sbjct: 641 VAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEA-KHFILNM 699
Query: 236 IREKNVMSWTTVIGAC 251
E W ++GAC
Sbjct: 700 PIEPGDAPWGALLGAC 715
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/715 (34%), Positives = 409/715 (57%), Gaps = 24/715 (3%)
Query: 51 SEPVRSLGFQEALSVLTE-----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
S VR +++++ +TE G + ++ +L+ C+ SL++ E +H ++K G
Sbjct: 122 SAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHCWVLKMGF 178
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
D +V L+++Y + G +E A KVF ++P +V SW ++ISG+ QN A+ V
Sbjct: 179 EHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDR 238
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M VT+ + L C+ + G +H YV+K+ E D V N+L ++YS G
Sbjct: 239 MKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGR 298
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A + F+ + ++++SW ++I A +N + V L FF +ML G++P+ T+ S++S+
Sbjct: 299 LQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASI 358
Query: 286 CGTMLSLRVGAQVHSLGIKLGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
G + R+G VH ++ + ++ + N+++ +Y K G +D A+ +F+ + ++++
Sbjct: 359 FGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRDVIS 418
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN +I G+AQ LA + + A+N E +I P+ T+ SIL S + AL
Sbjct: 419 WNTLITGYAQN-GLASEAIDAYNMMEEGRTIV---------PNQGTWVSILPAYSHVGAL 468
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+QG +IH +K DV V T L++MY KCGR+E A +F E+ T + W ++I+
Sbjct: 469 QQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSL 528
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
H +ALQLF+DM GV+ + +TFV L+ACS++G+V EA F+ MQKEY+IKP
Sbjct: 529 GIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPN 588
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+ HY C++D+F R G +E+A++ + M + + IW +A CR HGN ELG +A+++LL
Sbjct: 589 LKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLL 648
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
++ ++ Y +L +I+ + G+WE V++L R+ L +T WS + + V F +
Sbjct: 649 EVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGN 708
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
HPQ AEI++ L L K K GY SF L D +E HSE+LAI FG+++
Sbjct: 709 QSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGIIS 768
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP SPI + K+ +C DCHN K I+ +T REIIVRDS R H F +G C+C D+
Sbjct: 769 TPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDY 823
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 271/512 (52%), Gaps = 32/512 (6%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+ + C N ++ A+ +HA ++ G QD ++T LV +Y G++ + F ++ R N
Sbjct: 57 VFRSCTN---INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKN 113
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLE-AGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ SW S++S YV+ + ++ ++L +G P T L AC SL G+++H
Sbjct: 114 IFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMH 170
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+V+K E D V SL LYS G++ A K F + ++V SW +I +NG
Sbjct: 171 CWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ LR +M +E ++ + T++S+ +C + G VH IK G S++ V N+++
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K G + +AQ++FDGM +LV+WN++IA + Q DD AL F +
Sbjct: 291 NMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQ-----NDD------PVTALGFFKE 339
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCG 437
+ GM+PDL T S+ +I +L G +H ++ +L D+V+G ALVNMY K G
Sbjct: 340 MLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLG 399
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG--VRPNQVTFVGA 495
I+ A VF ++ +R +ISW ++ITG+A + L+ +A+ + +M+ G + PNQ T+V
Sbjct: 400 SIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSI 458
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDF 553
L A S+ G + + + ++ + K +D ++ CLIDM+ + G +E+A ++
Sbjct: 459 LPAYSHVGALQQGM---KIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQ 515
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
E V W+ I+ HG+ E A QL K
Sbjct: 516 E-TSVPWNAIISSLGIHGHGE----KALQLFK 542
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 160/320 (50%), Gaps = 32/320 (10%)
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
++ V Q+H+L + LG A ++ + ++ LY G + + F + N+ +WN+M++
Sbjct: 63 NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVS 122
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ + +D + TE LS+ SG++PD YTF +L C ++L GE++
Sbjct: 123 AYVR-RGRYRDSMDC---VTELLSL------SGVRPDFYTFPPVLKAC---LSLADGEKM 169
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H LK GF DV V +L+++Y + G +E A +VFV+M R + SW +MI+GF +
Sbjct: 170 HCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNV 229
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM- 529
+AL++ + M V+ + VT L C+ + V + + Y IK ++ +
Sbjct: 230 AEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGV-----LVHLYVIKHGLESDVF 284
Query: 530 ---CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGN--MELGFYAAE 581
LI+M+ + G +++A FD ++ D V W+ IA ++ + LGF+
Sbjct: 285 VSNALINMYSKFGRLQDAQRVFDGMEVRDL----VSWNSIIAAYEQNDDPVTALGFFKEM 340
Query: 582 QLLKLKPKDCESYAMLLDIF 601
+ ++P D + L IF
Sbjct: 341 LFVGMRP-DLLTVVSLASIF 359
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/688 (34%), Positives = 390/688 (56%), Gaps = 17/688 (2%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
T + L+Q K L+ + +HA +++ G + F+ +N+Y KCG ++ K+F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
D + + N+VSWTS+I+G+ NS+ + A+ F M G T L + L AC+SL +I+
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
G Q+H VVK + VG++L +YS CG L+ A KAF + K+ + WT++I
Sbjct: 194 FGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFV 253
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NG+ + L + KM+++ + ++ L S S C + + G +H+ +KLG+
Sbjct: 254 KNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETF 313
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ N++ +Y K G + A +F S +++V+ A+I G+ +M + K
Sbjct: 314 IGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEK----------- 362
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
ALS F L G++P+ +TF+S++ C+ LE G Q+H +K F D V + LV+
Sbjct: 363 ALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVD 422
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG + + ++F E+ I+W +++ F+ H L A++ F M+ G++PN VT
Sbjct: 423 MYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVT 482
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
FV L CS+AGMV + L YF M+K Y + P +HY C+ID+ R G ++EA DFI M
Sbjct: 483 FVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNM 542
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
FEPN W F+ C+ HG+ME +AA++L+KL+P++ ++ +L +I+ +WEDV
Sbjct: 543 PFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQ 602
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
++ + ++ +++ +SW+ I++K + F D HPQ EI++ LD L+++ K GY
Sbjct: 603 SLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVP 662
Query: 672 QESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
Q L D +E YHSE++A+AF LL P PI+V K+ +C DCH+ +K I+
Sbjct: 663 QTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKFIS 722
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T R IIVRD R H F NG C+C D+
Sbjct: 723 KVTERNIIVRDISRFHHFSNGSCSCGDY 750
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 204/416 (49%), Gaps = 30/416 (7%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQEALS EG + S+LQ C + ++ +H +VK G + FV +
Sbjct: 157 FQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSN 216
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L ++Y KCG + +A K F+ +P + V WTS+I G+V+N + A+ ++ M+ +
Sbjct: 217 LTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFID 276
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L + L+ACS+L++ GK +HA ++K E +T +GN+L +YS G + SA F
Sbjct: 277 QHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQ 336
Query: 235 RIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ +++S T +I E + + L F + GI+PNEFT TS+ C L
Sbjct: 337 IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLE 396
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G+Q+H +K + + V ++++ +Y KCGL D + +LFD + + + + WN ++ +
Sbjct: 397 HGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFS 456
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG------ 407
Q H G A+ F+ + G+KP+ TF ++L CS +E G
Sbjct: 457 Q-----------HGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSS 505
Query: 408 -EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMI 461
E+I+ + K S ++++ + G+++ A M + W S +
Sbjct: 506 MEKIYGVVPKEEHYS------CVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFL 555
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 107/221 (48%), Gaps = 17/221 (7%)
Query: 372 ALSIFSKLNSSGMK-PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+ S L SG K D T + ++ +R L +G+Q+HA+ ++ G L + + +
Sbjct: 58 SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
N+Y KCG ++ ++F +MS R ++SWTS+ITGFA++S +AL F M + G Q
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC-------LIDMFVRLGCIEE 543
L AC++ G + + V + C L DM+ + G + +
Sbjct: 178 ALSSVLQACTSLGAI--------QFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSD 229
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
A ++M + + V+W+ I G ++G+ + A +++
Sbjct: 230 ACKAFEEMPCK-DAVLWTSMIDGFVKNGDFKKALTAYMKMV 269
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/702 (33%), Positives = 389/702 (55%), Gaps = 20/702 (2%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL + E G + + SLL C + L + +H++++K G D+ L++
Sbjct: 229 ALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLD 288
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG++E A +F+ R NVV W ++ Y Q S + +F M G +P T
Sbjct: 289 LYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFT 348
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L C+ I LG+QIH+ +K E D V L +YS L+ A K +
Sbjct: 349 YPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLE 408
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++V+SWT++I ++ + L F +M G+ P+ L S +S C + ++R G Q
Sbjct: 409 KRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ 468
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H+ GYA+++ + N+++ LY +CG +EA LF + H + +TWN +I+G Q
Sbjct: 469 IHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRL 528
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
+AL +F K++ +G K +++TF S ++ + L ++QG+Q+H +KT
Sbjct: 529 Y-----------EQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKT 577
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G S+ V AL+++Y KCG IE A +F EMS R +SW ++IT + H +AL LF
Sbjct: 578 GHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLF 637
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
+ M G++PN VTF+G LAACS+ G+V E L YF+ M Y + P+ DHY C++D+ R
Sbjct: 638 DQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGR 697
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G ++ A F+ +M N +IW ++ C+ H N+E+G AA+ LL+L+P D SY +L
Sbjct: 698 AGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLL 757
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+ + G+W + V+ + ++ + + SWI +K+ V++F D LHP S +I+K L
Sbjct: 758 SNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFL 817
Query: 658 DELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
EL ++ GYKQ+ E ++ + HSEKLA+AFGL+ P P+ V+K+
Sbjct: 818 SELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSEKLAVAFGLMTLPPCIPLRVIKNL 877
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+++K + +T REI++RD R H F +G C+C D+
Sbjct: 878 RVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSCSCGDY 919
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/544 (30%), Positives = 278/544 (51%), Gaps = 24/544 (4%)
Query: 55 RSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R LG +EA + ++ V + YV S+L C K + +IHA + K + F
Sbjct: 122 RGLG-KEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETF 180
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+ +Y G+ + A++VF ++ + V++ +LISG+ Q E A+ +F +M +G
Sbjct: 181 VGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSG 240
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P VT+ + L AC+S+ ++ GKQ+H+Y++K D SL LY CG + +A
Sbjct: 241 LRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAH 300
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
FN NV+ W ++ A G+ + + F +M + GI PN+FT I C
Sbjct: 301 DIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTG 360
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+ +G Q+HSL IK G+ S++ V ++ +Y K +D+A+K+ + + ++V+W +MIA
Sbjct: 361 QIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIA 420
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G+ Q H+ EAL+ F ++ G+ PD +S + C+ + A+ QG QI
Sbjct: 421 GYVQ-----------HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQI 469
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA +G+ +D+ + LVN+Y +CGR E A +F E+ + I+W +I+GF L
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLY 529
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM- 529
QAL +F M AG + N TF+ A++A +N + + ++ + K + +
Sbjct: 530 EQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGK---QVHGRAVKTGHTSETEVA 586
Query: 530 -CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN--MELGFYAAEQLLKL 586
LI ++ + G IE+A +M NEV W+ I C +HG L + + L
Sbjct: 587 NALISLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGL 645
Query: 587 KPKD 590
KP D
Sbjct: 646 KPND 649
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 274/534 (51%), Gaps = 23/534 (4%)
Query: 36 SYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI 95
S RS +K I + N E + SL +A + + ++ LQ C R + +
Sbjct: 9 SLHRSLAKFI-VPDNPEKILSLVAAKA----SHHRALGSADLTCALQACRGRGNRWPLVL 63
Query: 96 -IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IHA V G D + L+++Y K G + +A++VF L + VSW +++SGY Q
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ A ++ M PT L + L+AC+ + G+ IHA V K +T VGN
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +LY GS A + F + + +++ T+I + G L+ F +M G++P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ T+ S+ + C ++ L+ G Q+HS +K G + + S++ LY+KCG ++ A +F
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIF 303
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ N+V WN M+ + Q+ DLAK + IF ++ ++G+ P+ +T+ I
Sbjct: 304 NLGDRTNVVLWNLMLVAYGQISDLAK-----------SFEIFGQMQATGIHPNKFTYPCI 352
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L C+ +E GEQIH+L++K GF SD+ V L++MY K +++A ++ + R +
Sbjct: 353 LRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDV 412
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SWTSMI G+ H +AL F++M GV P+ + A +AC+ + + L ++
Sbjct: 413 VSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGL---QI 469
Query: 515 MQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ Y D + L++++ R G EEAF +++D + +E+ W+ I+G
Sbjct: 470 HARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG 522
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 195/403 (48%), Gaps = 25/403 (6%)
Query: 177 TLGTALTACSSLESIR-------LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
LG+A C+ L++ R L +IHA V D +GN L LY+ G + A
Sbjct: 39 ALGSADLTCA-LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQA 97
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F + ++ +SW ++ + G + R +S+M + P + L+S+ S C
Sbjct: 98 RQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKG 157
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
G +H+ K + S V N+++ LYL G A+++F M + VT+N +I
Sbjct: 158 KLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLI 217
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+GHAQ G AL IF ++ SG++PD T +S+L C+ + L++G+Q
Sbjct: 218 SGHAQC-----------GHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQ 266
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H+ LK G D + +L+++Y KCG IE A +F ++ W M+ + S
Sbjct: 267 LHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISD 326
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
++ ++F M G+ PN+ T+ L C+ G + LG ++ K D Y+
Sbjct: 327 LAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI--ELGE-QIHSLSIKNGFESDMYV 383
Query: 530 --CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
LIDM+ + C+++A ++ ++ + + V W+ IAG +H
Sbjct: 384 SGVLIDMYSKYRCLDKARKILEMLE-KRDVVSWTSMIAGYVQH 425
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 18/205 (8%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+++AL V + G K +++S + N + + +H VKTG + V
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++YGKCG++E+A+ +F + N VSW ++I+ Q+ + A+ +F M + G P
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPN 648
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT L ACS + + G + +++ + N + Y+ + +
Sbjct: 649 DVTFIGVLAACSHVGLVEEG------LSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLD 702
Query: 235 RIRE--------KNVMSWTTVIGAC 251
R R N M W T++ AC
Sbjct: 703 RARRFVDEMPITANAMIWRTLLSAC 727
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 235/682 (34%), Positives = 390/682 (57%), Gaps = 18/682 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + +L E +H++++K G D V L+++Y C +++ A ++F
Sbjct: 319 SLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTE 378
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV W ++ + + + +F M G P T + L C+S+ ++ LG+QIH
Sbjct: 379 NVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIH 438
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
V+K + + V + L +Y+ G L++A + E +V+SWT +I ++
Sbjct: 439 TQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFA 498
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F +ML+ GIQ + +S S C + +L G Q+H+ GY+ +L + N+++
Sbjct: 499 EALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALV 558
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFS 377
LY +CG + EA F+ + + ++WN +I+G AQ +G E AL +F+
Sbjct: 559 SLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQ------------SGYCEDALKVFA 606
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
++N + ++ +TF S ++ + + ++QG+QIHA+ +K GF SD+ V AL+ Y KCG
Sbjct: 607 QMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCG 666
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
IE A R F EM + +SW +MITG++ H ++A+ LFE M G PN VTFVG L+
Sbjct: 667 SIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLS 726
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
ACS+ G+V + LGYFE M KE+ + P HY C++D+ R G + A FI++M EP+
Sbjct: 727 ACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDA 786
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
IW ++ C H N+E+G +AA+ LL+L+P+D +Y +L +++ +G+W+ + +
Sbjct: 787 TIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMM 846
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
R + + SWI +K+ V++F D LHP + +I++ L EL +KA GY Q L
Sbjct: 847 RNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDRYSLL 906
Query: 678 TD----EESASVY-HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
D ++ +VY HSEKLAI FGLL+ PI V+K+ +C+DCH++IK ++ ++ R
Sbjct: 907 NDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKISNRA 966
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
IIVRD+ R H F G C+C+D+
Sbjct: 967 IIVRDAYRFHHFEGGICSCKDY 988
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 164/518 (31%), Positives = 286/518 (55%), Gaps = 24/518 (4%)
Query: 76 SYVSLLQECV-NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S+ S+L+ C +R + AE IHA I+ G + L+ +Y K G + A+KVFDN
Sbjct: 113 SFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDN 172
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
L + VSW ++ISG+ QN E AIH+F +M AG +PT + L+ C+ ++ +G
Sbjct: 173 LCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVG 232
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+HA V KY + +T V N+L +LYS + SA K F++++ K+ +S+ ++I +
Sbjct: 233 EQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQ 292
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + L F+KM + ++P+ T+ S+ S C + +L G Q+HS IK G +S++ V
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ LY+ C + A ++F N+V WN M+ ++ D+LS E+
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKL-----DNLS------ESFR 401
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF ++ G+ P+ +T+ SIL C+ + AL+ GEQIH +KTGF +V V + L++MY
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYA 461
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
K G+++ A + ++ ++SWT++I+G+A H+L +AL+ F++ML G++ + + F
Sbjct: 462 KHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSS 521
Query: 495 ALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
A++AC+ N G A Y ++ I L+ ++ R G I+EA+ +
Sbjct: 522 AISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA------LVSLYARCGRIKEAYLEFE 575
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
K+D + + W+ I+G + G E Q+ + K
Sbjct: 576 KID-AKDSISWNGLISGFAQSGYCEDALKVFAQMNRAK 612
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 146/499 (29%), Positives = 255/499 (51%), Gaps = 20/499 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y+ LL C+N SL + +H I+K G + + LV+VY G+++ KVF+++
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE-SIRLG 194
P +V SW +ISG+++ + +F M+E PT ++ + L ACS IR
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+QIHA ++ + + N L LY+ G + SA K F+ + K+ +SW +I +N
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQN 191
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + + F +M + GI P + +S+ S C + VG Q+H+L K G + V
Sbjct: 192 GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVC 251
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ LY + A+K+F M + V++N++I+G AQ AL
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQ-----------QGFSDGALE 300
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F+K+ +KPD T +S+L+ C+ AL +GEQ+H+ +K G SD++V AL+++Y
Sbjct: 301 LFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYV 360
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
C I+ A +F+ T ++ W M+ F ++ ++F M + G+ PNQ T+
Sbjct: 361 NCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPS 420
Query: 495 ALAACSNAGMVYEALGYFEMMQKEY-KIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKM 551
L C++ G AL E + + K + Y+C LIDM+ + G ++ A ++ +
Sbjct: 421 ILRTCTSVG----ALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Query: 552 DFEPNEVIWSVFIAGCRRH 570
E + V W+ I+G +H
Sbjct: 477 T-EDDVVSWTALISGYAQH 494
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 213/391 (54%), Gaps = 23/391 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S+L+ C + +L E IH ++KTG + +V + L+++Y K G ++ A + L
Sbjct: 417 TYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTL 476
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSWT+LISGY Q++ A+ F +ML G N+ +A++AC+ ++++ G+
Sbjct: 477 TEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGR 536
Query: 196 QIHA--YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
QIHA YV Y +D S+GN+L SLY+ CG + A F +I K+ +SW +I +
Sbjct: 537 QIHAQSYVSGYS--EDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQ 594
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+G L+ F++M ++ + FT S S + +++ G Q+H++ IK G+ S++ V
Sbjct: 595 SGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEV 654
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ Y KCG +++A++ F M N V+WNAMI G++Q H G EA+
Sbjct: 655 SNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQ-----------HGYGNEAV 703
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNM 432
++F K+ G P+ TF +L+ CS + + +G +++ + G + +V++
Sbjct: 704 NLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDL 763
Query: 433 YKKCGRIERASRVFVEMST-------RTLIS 456
+ G + RA + EM RTL+S
Sbjct: 764 ISRAGFLSRARKFIEEMPIEPDATIWRTLLS 794
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 120/232 (51%), Gaps = 4/232 (1%)
Query: 59 FQEALS----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL +L G + + S + C ++L+ IHA +G +D +
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y +CG ++EA F+ + + +SW LISG+ Q+ E A+ VF M A +
Sbjct: 557 LVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEAS 616
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T G+A++A +++ +I+ GKQIHA ++K + D V N+L + Y+ CGS+ A + F
Sbjct: 617 FFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFC 676
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ EKN +SW +I ++G + + F KM G PN T + S C
Sbjct: 677 EMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSAC 728
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 159/348 (45%), Gaps = 29/348 (8%)
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M GI N T + +C SL ++H +KLG+ + + N ++ +Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+D K+F+ M + ++ +W+ +I+G + L +FS + + P
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFME-----------KKMSNRVLDLFSCMIEENVSP 109
Query: 387 DLYTFSSILTICS-RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
+F+S+L CS + + EQIHA + G L ++ L+ +Y K G I A +V
Sbjct: 110 TEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKV 169
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + T+ +SW +MI+GF+ + +A+ LF +M AG+ P F L+ C+ +
Sbjct: 170 FDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKL- 228
Query: 506 YEALGYFEMMQK----EYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
F++ ++ +K ++ Y+C L+ ++ R+ A KM +EV
Sbjct: 229 ------FDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQ-SKDEVS 281
Query: 560 WSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
++ I+G + G + L + + LKP DC + A LL S G
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKP-DCVTVASLLSACASNG 328
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/685 (34%), Positives = 384/685 (56%), Gaps = 18/685 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+++ +L C + L + HA ++K G DF + T LV++Y K G+M+ A++VFD L
Sbjct: 164 TFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL 223
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ +V ++ +I GY ++ E A +F M + G P ++ + L CS+ E++ GK
Sbjct: 224 YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGK 283
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA + DD V +L +Y CGS+ A + F++++ ++V+SWT +I EN
Sbjct: 284 AVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENS 343
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
F+ M EGIQP+ T I + C + L + ++HS ++ G+ ++L V
Sbjct: 344 NIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDT 403
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
+++++Y KCG + +A+++FD MS ++V+W+AMI + + NG G EA
Sbjct: 404 ALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVE------------NGCGEEAFE 451
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F + + ++PD+ T+ ++L C L AL+ G +I+ +K +S + VG AL+NM
Sbjct: 452 TFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNV 511
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
K G IERA +F M R +++W MI G++ H + +AL LF+ ML RPN VTFVG
Sbjct: 512 KHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVG 571
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS AG V E +F + I P M+ Y C++D+ R G ++EA I +M +
Sbjct: 572 VLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLK 631
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN IWS +A CR +GN+++ AAE+ L +P D Y L ++ +AG WE+VA V+
Sbjct: 632 PNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVR 691
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ + + +WI ++ K+++F D HPQ+ EI+ L L+ K GY
Sbjct: 692 KVMESRGVRKEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQ 751
Query: 675 FEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L ++E A YHSEKLAIA+G+L+ P +PI + K+ +C DCH+ K I+ +T
Sbjct: 752 NVLHNVGEQEKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVT 811
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REII RD+ R H F NG C+C D+
Sbjct: 812 GREIIARDASRFHHFKNGVCSCGDY 836
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 282/532 (53%), Gaps = 18/532 (3%)
Query: 57 LGFQEALSVLTEGPK-VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+G + L L EG + + +YV L Q C+ + + + HI+++G + + + L
Sbjct: 43 VGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTL 102
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ ++ CGNM EA++ FD++ VV+W ++I+GY Q + A +F M++ P+
Sbjct: 103 IKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSI 162
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+T L ACSS ++LGK+ HA V+K D +G +L S+Y GS++ A + F+
Sbjct: 163 ITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDG 222
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ +++V ++ +IG ++G+ + + F +M EG +PN + SI C T +L G
Sbjct: 223 LYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWG 282
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
VH+ + G ++RV +++ +Y+ CG ++ A+++FD M ++V+W MI G+A+
Sbjct: 283 KAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAEN 342
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
++ +A +F+ + G++PD T+ I+ C+ L +IH+ +
Sbjct: 343 SNI-----------EDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVV 391
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF +D++V TALV+MY KCG I+ A +VF MS R ++SW++MI + + +A +
Sbjct: 392 RAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFE 451
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK--PVMDHYMCLID 533
F M V P+ VT++ L AC + G + + + K + PV + LI+
Sbjct: 452 TFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGN---ALIN 508
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
M V+ G IE A + M + + V W+V I G HGN +++LK
Sbjct: 509 MNVKHGSIERARYIFENM-VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLK 559
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 221/422 (52%), Gaps = 16/422 (3%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
FQ + EG K S++S+L C ++L+ + +HA + TG D V T L+ +
Sbjct: 248 FQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRM 307
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y CG++E A++VFD + +VVSWT +I GY +NS E A +F M E G P +T
Sbjct: 308 YMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITY 367
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ AC+S + L ++IH+ VV+ D V +L +Y+ CG++ A + F+ +
Sbjct: 368 IHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSR 427
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V+SW+ +IGA ENG + F M ++P+ T ++ + CG + +L +G ++
Sbjct: 428 RDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEI 487
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++ IK S++ V N+++ + +K G ++ A+ +F+ M ++VTWN MI G+
Sbjct: 488 YTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGY------ 541
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK-T 417
S H EAL +F ++ +P+ TF +L+ CSR +E+G + + L
Sbjct: 542 -----SLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGR 596
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG---FANHSLSHQA 473
G + + + +V++ + G ++ A + M + S W++++ + N ++ +A
Sbjct: 597 GIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERA 656
Query: 474 LQ 475
+
Sbjct: 657 AE 658
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 14/220 (6%)
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
S G A + +L D T+ + C L G+Q+ +++G ++
Sbjct: 37 SIFTGQVGANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNI 96
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
L+ ++ CG + A + F + +T+++W ++I G+A +A LF M+
Sbjct: 97 YELNTLIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDE 156
Query: 484 GVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGC 540
+ P+ +TF+ L ACS+ AG+ LG E + K+ V D + L+ M+V+ G
Sbjct: 157 AMEPSIITFLIVLDACSSPAGL---KLGK-EFHAQVIKVGFVSDFRIGTALVSMYVKGGS 212
Query: 541 IEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
++ A FD + K D ++V I G + G+ E F
Sbjct: 213 MDGARQVFDGLYKRDVST----FNVMIGGYAKSGDGEKAF 248
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/706 (33%), Positives = 396/706 (56%), Gaps = 20/706 (2%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
R+LG + + + P + + SLL C L + +H++++K G D+ +
Sbjct: 227 RALGIFDEMQLSGLSP--DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y K G++EEA ++FD+ R NVV W ++ Y Q + +F ML AG P
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L C+ I LG+QIH+ +K + D V L +YS G L+ A + +
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
I EK+V+SWT++I ++ + L F +M + GI P+ L S S C + ++
Sbjct: 405 MIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ 464
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G+Q+H+ GY++++ + N ++YLY +CG+ EA F+ + H +TWN +I+G AQ
Sbjct: 465 GSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQ 524
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
EAL +F K++ +G K +++TF S ++ + L ++QG+QIHA
Sbjct: 525 -----------SGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARV 573
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+KTG+ S+ + AL+++Y KCG IE A F EM+ R +SW ++IT + H +AL
Sbjct: 574 IKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEAL 633
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF+ M G++P+ VTFVG L ACS+ G+V E L YF+ M E+ I P DHY C++D+
Sbjct: 634 DLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDI 693
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++ A F+++M + ++W ++ C+ H N+E+G +AA+ LL+L+P D SY
Sbjct: 694 LGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASY 753
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L + + G+W ++ + ++ + + SWI +K+ V++F D LHP + +I+
Sbjct: 754 VLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIY 813
Query: 655 KVLDELVEKAKCFGYKQQESFELTDE------ESASVYHSEKLAIAFGLLNTPIVSPILV 708
L L ++ GYK QE++ L E + + HSEKLA+AFGL++ P P+ V
Sbjct: 814 NFLSHLNDRLYKIGYK-QENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRV 872
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+ +C DCH ++K + + REI++RD R H F NG C+C D+
Sbjct: 873 IKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCGDY 918
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 283/542 (52%), Gaps = 29/542 (5%)
Query: 60 QEALSVLTEGPK--VQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ + E + V + YV S+L C + +IH + K G + FV L
Sbjct: 125 EEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNAL 184
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y +C + A +VF ++ + V++ +LISG+ Q + A+ +F +M +G P +
Sbjct: 185 ISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDS 244
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT+ + L ACS++ +R GKQ+H+Y++K D + SL LY G + A++ F+
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
NV+ W ++ A G+ + + F +ML+ G++PN+FT + C + +G
Sbjct: 305 GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLG 364
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+HSL IK G+ S++ V ++ +Y K G +D+AQ++ D + ++V+W +MIAG+ Q
Sbjct: 365 EQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQ- 423
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H EAL F ++ + G+ PD +S ++ C+ + A+ QG QIHA
Sbjct: 424 ----------HEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVY 473
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+G+ +DV + LV +Y +CG + A F + + I+W +I+GFA L +AL+
Sbjct: 474 VSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALK 533
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDM 534
+F M AG + N TFV +++A +N + + + +++ Y + + + LI +
Sbjct: 534 VFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISN--ALISL 591
Query: 535 FVRLGCIEEAFDFIKKMDF----EPNEVIWSVFIAGCRRHGN--MELGFYAAEQLLKLKP 588
+ + G IE+A KMDF + NEV W+ I C +HG L + + LKP
Sbjct: 592 YGKCGSIEDA-----KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKP 646
Query: 589 KD 590
D
Sbjct: 647 SD 648
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/484 (30%), Positives = 256/484 (52%), Gaps = 23/484 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA + G + L+++Y K G + A++VF+ L + VSW +++SGY QN
Sbjct: 64 IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ ++ +M +G PT L + L+AC+ E +LG+ IH V K +T VGN+
Sbjct: 124 GEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNA 183
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L SLY C S A + F + + +++ T+I + G + L F +M G+ P+
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T+ S+ + C + LR G Q+HS +K G + + + S++ LY+K G ++EA ++FD
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
N+V WN M+ + Q+ DLAK + IF ++ ++G++P+ +T+ +L
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAK-----------SFDIFYRMLAAGVRPNKFTYPCML 352
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ + GEQIH+LT+K GF SD+ V L++MY K G +++A R+ + + ++
Sbjct: 353 RTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVV 412
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE-----ALG 510
SWTSMI G+ H +AL+ F++M G+ P+ + A++AC+ V++ A
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARV 472
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Y + I + L+ ++ R G +EAF + ++ + + W+ I+G +
Sbjct: 473 YVSGYSADVSI------WNGLVYLYARCGISKEAFSSFEAIEHKEG-ITWNGLISGFAQS 525
Query: 571 GNME 574
G E
Sbjct: 526 GLYE 529
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 210/438 (47%), Gaps = 19/438 (4%)
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC-SSLESIRLG 194
PR S+ ++G++ PE + +F V AL AC S L
Sbjct: 3 PR-GAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLV 61
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+IHA + +GN L LY+ G + A + F + ++ +SW V+ +N
Sbjct: 62 PEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQN 121
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + +R + +M G+ P + L+SI S C ++G +H K G+ S V
Sbjct: 122 GLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVG 181
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ LYL+C A ++F M + + VT+N +I+GHAQ H G AL
Sbjct: 182 NALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQ---------CGH--GDRALG 230
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF ++ SG+ PD T +S+L CS + L +G+Q+H+ LK G D ++ +L+++Y
Sbjct: 231 IFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYV 290
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
K G IE A ++F ++ W M+ + ++ +F ML AGVRPN+ T+
Sbjct: 291 KSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPC 350
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMD 552
L C++ G + LG ++ K D Y+ LIDM+ + G +++A + ++
Sbjct: 351 MLRTCTHTGEI--GLGE-QIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE 407
Query: 553 FEPNEVIWSVFIAGCRRH 570
E + V W+ IAG +H
Sbjct: 408 -EKDVVSWTSMIAGYVQH 424
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 238/685 (34%), Positives = 403/685 (58%), Gaps = 20/685 (2%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF-VMTFLVNVYGKCG-NMEEAQKVFDN 134
+ +LL+ C N + I A ++KTG V L++++ K G +++ A+ VFD
Sbjct: 148 FTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDK 207
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ N+V+WT +I+ Y Q + A+ +F +L + P TL + L+AC LE LG
Sbjct: 208 MQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLG 267
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+H++V++ D VG +L +Y+ ++ ++ K FN + NVMSWT +I ++
Sbjct: 268 KQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQS 327
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + ++ F ML + PN FT +S+ C ++ +G Q+H IKLG ++ V
Sbjct: 328 RQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVG 387
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS++ +Y + G ++ A+K F+ + NL+++N +A+ +D D+ H
Sbjct: 388 NSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALD--SDESFNH-------- 437
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
++ +G+ +T++ +L+ + + + +GEQIHAL +K+GF +++ + AL++MY
Sbjct: 438 ---EVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYS 494
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG E A +VF +M R +I+WTS+I+GFA H + +AL+LF +ML GV+PN+VT++
Sbjct: 495 KCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIA 554
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS+ G++ EA +F M + I P M+HY C++D+ R G + EA +FI M F+
Sbjct: 555 VLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFD 614
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ ++W F+ CR H N +LG +AA+++L+ +P D +Y +L +++ S GRW+DVA ++
Sbjct: 615 ADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALR 674
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+++KL + +SWI + ++V+ F D HPQ+ +I+ LDEL K K GY
Sbjct: 675 KSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTD 734
Query: 675 FELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F L D +E Y HSEK+A+A+ L++TP PI V K+ +C DCH IK I+ +T
Sbjct: 735 FVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIVT 794
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H +G C+C D+
Sbjct: 795 GREIVVRDANRFHHIKDGKCSCNDY 819
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 5/210 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y LL ++ E IHA IVK+G + + L+++Y KCGN E A +VF+++
Sbjct: 450 TYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDM 509
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
NV++WTS+ISG+ ++ A+ +F +MLE G P VT L+ACS + I
Sbjct: 510 GYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAW 569
Query: 196 QIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACG 252
+ H + Y + + C L G L AI+ N + + + + W T +G+C
Sbjct: 570 K-HFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCR 628
Query: 253 ENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+ G K+L E P + L S
Sbjct: 629 VHRNTKLGEHAAKKILEREPHDPATYILLS 658
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/698 (35%), Positives = 392/698 (56%), Gaps = 19/698 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G + +Y +L+ C ++ + IH+H G D FV T LV+ Y KCG
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ EAQ++F ++ +VV+W ++I+G + A+ + + M E G P + T+ L
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+++ GK +H Y V+ ++ VG L +Y+ C L A K F+ + +N +S
Sbjct: 219 TVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS 278
Query: 244 WTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W+ +IG + + L F +M L + + P TL S+ C + L G ++H
Sbjct: 279 WSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYI 338
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IKLG ++ + N+++ +Y KCG++D+A + FD M+ + V+++A+++G Q
Sbjct: 339 IKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQ-------- 390
Query: 363 LSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG ALSIF + SG+ PDL T +L CS L AL+ G H + GF +
Sbjct: 391 ----NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFAT 446
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D ++ AL++MY KCG+I A VF M ++SW +MI G+ H L +AL LF D+L
Sbjct: 447 DTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLL 506
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G++P+ +TF+ L++CS++G+V E +F+ M +++ I P M+H +C++D+ R G I
Sbjct: 507 ALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLI 566
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA FI+ M FEP+ IWS ++ CR H N+ELG ++++ L P+ ++ +L +I+
Sbjct: 567 DEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIY 626
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AGRW+D A ++ ++ L + SWI I V++F D H Q ++I + L+EL+
Sbjct: 627 SAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELL 686
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ K GY+ + SF D +E +YHSEKLAIAFG+LN PILV K+ +C
Sbjct: 687 VEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCG 746
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH IK +T +T REI VRD+ R H F NG C C DF
Sbjct: 747 DCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGDF 784
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 265/522 (50%), Gaps = 22/522 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++Y+ LL+ C+ KSL+ A+ IH H +K S+ D V+ L +Y C + A+++FD
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P +V+ W +I Y N + AI ++ ML G P T L ACS L +I G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+IH++ + E D V +L Y+ CG L A + F+ + ++V++W +I C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ +M EGI PN T+ + G +L G +H ++ + + + V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++ +Y KC + A+K+FD M N V+W+AMI G+ D K EAL
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVX-SDCMK----------EALE 297
Query: 375 IFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ M P T S+L C++L L +G ++H +K G + D+++G L++MY
Sbjct: 298 LFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMY 357
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A R F M+ + +S++++++G + + AL +F M L+G+ P+ T +
Sbjct: 358 AKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417
Query: 494 GALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
G L ACS+ A + + + ++ + + D +C LIDM+ + G I A + +
Sbjct: 418 GVLPACSHLAALQHGFCSHGYLIVRGF----ATDTLICNALIDMYSKCGKISFAREVFNR 473
Query: 551 MDFEPNEVIWSVFIAGCRRHG-NME-LGFYAAEQLLKLKPKD 590
MD + V W+ I G HG ME LG + L LKP D
Sbjct: 474 MD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDD 514
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 237/470 (50%), Gaps = 20/470 (4%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
Q + + EG +S+ V +L K+L + + +H + V+ V T L+++Y
Sbjct: 196 QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMY 255
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTL 178
KC + A+K+FD + N VSW+++I GYV + + A+ +F M L+ PT VTL
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTL 315
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
G+ L AC+ L + G+++H Y++K D +GN+L S+Y+ CG ++ AI+ F+ +
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNP 375
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+ +S++ ++ C +NG A L F M GI P+ T+ + C + +L+ G
Sbjct: 376 KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCS 435
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H I G+A++ + N+++ +Y KCG + A+++F+ M ++V+WNAMI G+
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG----- 490
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKT 417
H G EAL +F L + G+KPD TF +L+ CS + +G A++
Sbjct: 491 ------IHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDF 544
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQL 476
+ + +V++ + G I+ A M + W+++++ H+ ++L
Sbjct: 545 SIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA----CRIHKNIEL 600
Query: 477 FEDM--LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
E++ + + P L+ +A ++ + + QK++ +K +
Sbjct: 601 GEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 245/698 (35%), Positives = 392/698 (56%), Gaps = 19/698 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G + +Y +L+ C ++ + IH+H G D FV T LV+ Y KCG
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ EAQ++F ++ +VV+W ++I+G + A+ + + M E G P + T+ L
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+++ GK +H Y V+ ++ VG L +Y+ C L A K F+ + +N +S
Sbjct: 219 TVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVS 278
Query: 244 WTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W+ +IG + + L F +M L + + P TL S+ C + L G ++H
Sbjct: 279 WSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYI 338
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IKLG ++ + N+++ +Y KCG++D+A + FD M+ + V+++A+++G Q
Sbjct: 339 IKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQ-------- 390
Query: 363 LSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG ALSIF + SG+ PDL T +L CS L AL+ G H + GF +
Sbjct: 391 ----NGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFAT 446
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D ++ AL++MY KCG+I A VF M ++SW +MI G+ H L +AL LF D+L
Sbjct: 447 DTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLL 506
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G++P+ +TF+ L++CS++G+V E +F+ M +++ I P M+H +C++D+ R G I
Sbjct: 507 ALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLI 566
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA FI+ M FEP+ IWS ++ CR H N+ELG ++++ L P+ ++ +L +I+
Sbjct: 567 DEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIY 626
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AGRW+D A ++ ++ L + SWI I V++F D H Q ++I + L+EL+
Sbjct: 627 SAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELL 686
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ K GY+ + SF D +E +YHSEKLAIAFG+LN PILV K+ +C
Sbjct: 687 VEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCG 746
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH IK +T +T REI VRD+ R H F NG C C DF
Sbjct: 747 DCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDF 784
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 266/522 (50%), Gaps = 22/522 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++Y+ LL+ C+ KSL+ A+ IH H +K S+ D V+ L +Y C + A+++FD
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P +V+ W +I Y N + AI ++ ML G P T L ACS L +I G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+IH++ + E D V +L Y+ CG L A + F+ + ++V++W +I C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ +M EGI PN T+ + G +L G +H ++ + + + V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++ +Y KC + A+K+FD M N V+W+AMI G+ A + EAL
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV-----------ASDCMKEALE 297
Query: 375 IFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ M P T S+L C++L L +G ++H +K G + D+++G L++MY
Sbjct: 298 LFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMY 357
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A R F EM+ + +S++++++G + + AL +F M L+G+ P+ T +
Sbjct: 358 AKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTML 417
Query: 494 GALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
G L ACS+ A + + + ++ + + D +C LIDM+ + G I A + +
Sbjct: 418 GVLPACSHLAALQHGFCSHGYLIVRGF----ATDTLICNALIDMYSKCGKISFAREVFNR 473
Query: 551 MDFEPNEVIWSVFIAGCRRHG-NME-LGFYAAEQLLKLKPKD 590
MD + V W+ I G HG ME LG + L LKP D
Sbjct: 474 MD-RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDD 514
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 238/470 (50%), Gaps = 20/470 (4%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
Q + + EG +S+ V +L K+L + + +H + V+ V T L+++Y
Sbjct: 196 QLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMY 255
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTL 178
KC + A+K+FD + N VSW+++I GYV + + A+ +F M L+ PT VTL
Sbjct: 256 AKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTL 315
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
G+ L AC+ L + G+++H Y++K + D +GN+L S+Y+ CG ++ AI+ F+ +
Sbjct: 316 GSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNP 375
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+ +S++ ++ C +NG A L F M GI P+ T+ + C + +L+ G
Sbjct: 376 KDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCS 435
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H I G+A++ + N+++ +Y KCG + A+++F+ M ++V+WNAMI G+
Sbjct: 436 HGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG----- 490
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKT 417
H G EAL +F L + G+KPD TF +L+ CS + +G A++
Sbjct: 491 ------IHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDF 544
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQL 476
+ + +V++ + G I+ A M + W+++++ H+ ++L
Sbjct: 545 SIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA----CRIHKNIEL 600
Query: 477 FEDM--LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
E++ + + P L+ +A ++ + + QK++ +K +
Sbjct: 601 GEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 650
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/747 (33%), Positives = 397/747 (53%), Gaps = 54/747 (7%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
GN+ P ++ E ++ P T ++S+L+ C N L IH + G D
Sbjct: 134 GNNHPAKAFDTFERMTDANIEPNRIT--FLSILKACNNYSILEKGRKIHTIVKAMGMETD 191
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V T L+ +Y KCG + A +VF + NVVSWT++I Q+ + A ++ ML+
Sbjct: 192 VAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQ 251
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
AG P VT + L +C++ E++ G++IH+++ + E D V N+L ++Y C S+
Sbjct: 252 AGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQE 311
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENG----EAV-QGLRFFSKMLSEGIQPNEFTLTSIS 283
A + F+R+ +++V+SW+ +I ++G E++ + + +M EG+ PN+ T SI
Sbjct: 312 AREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSIL 371
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI--MY---------------------- 319
C +L G Q+H+ K+G+ + ++ +I MY
Sbjct: 372 RACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVV 431
Query: 320 -------LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+Y+KCG + A+K+F M N+V+WN MIAG+AQ D+ K
Sbjct: 432 AWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVK-----------V 480
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ S + + G +PD T +IL C L LE+G+ +HA +K G SD VV T+L+ M
Sbjct: 481 FELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGM 540
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG++ A VF +MS R ++W +M+ G+ H +A+ LF+ ML V PN++T
Sbjct: 541 YSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITL 600
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
++ACS AG+V E F MMQ+++K+ P HY C++D+ R G ++EA +FI+ M
Sbjct: 601 TAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMP 660
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
EP+ +W + C+ H N++L AA +L+L+P Y L +I+ AGRW+D
Sbjct: 661 CEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTK 720
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V+ + + L + S I I ++++F D HP+ I L+ L ++ K GY
Sbjct: 721 VRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLTKEMKEAGYTPD 780
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
F L D +E A +HSEKLAIA+GLL TP +PI ++K+ +C DCH K I+
Sbjct: 781 MRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGTPIRIMKNLRVCGDCHTATKFISK 840
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI+ RD+ R H F NG C+C DF
Sbjct: 841 IRKREIVARDANRFHYFNNGTCSCGDF 867
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/627 (27%), Positives = 298/627 (47%), Gaps = 88/627 (14%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EA+ +L G V +++Y +++ C + + +++H + + G D ++
Sbjct: 37 LREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNS 96
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N Y K ++ A++VF + +VV+W+S+I+ Y N+ P A F M +A P
Sbjct: 97 LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T + L AC++ + G++IH V E D +V +L ++YS CG ++ A + F+
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFH 216
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ E+NV+SWT +I A ++ + + + +ML GI PN T S+ + C T +L
Sbjct: 217 KMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNR 276
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++HS + G +++ V N+++ +Y KC V EA+++FD MS ++++W+AMIAG+AQ
Sbjct: 277 GRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ 336
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
K+ + E + ++ G+ P+ TF SIL C+ ALEQG QIHA
Sbjct: 337 SGYKDKESID------EVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL 390
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRI-------------------------------ERAS 443
K GF D + TA+ NMY KCG I A
Sbjct: 391 SKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAE 450
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC---- 499
+VF EM TR ++SW MI G+A + + +L M G +P++VT + L AC
Sbjct: 451 KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALA 510
Query: 500 -------------------------------SNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
S G V EA F+ M + +
Sbjct: 511 GLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVA-----W 565
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELG---FYAAEQ 582
++ + + G EA D K+M E PNE+ + I+ C R G ++ G F ++
Sbjct: 566 NAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQE 625
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWED 609
K+ P+ + Y ++D+ AGR ++
Sbjct: 626 DFKMTPRK-QHYGCMVDLLGRAGRLQE 651
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 157/323 (48%), Gaps = 25/323 (7%)
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + ++ + G+ N T + C G VH +LG ++ +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS++ Y K V A+++F M+ ++VTW++MIA +A +N +A
Sbjct: 95 NSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYA-----------GNNHPAKAFD 143
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F ++ + ++P+ TF SIL C+ LE+G +IH + G +DV V TAL+ MY
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS 203
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A VF +M+ R ++SWT++I A H ++A +L+E ML AG+ PN VTFV
Sbjct: 204 KCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVS 263
Query: 495 ALAACSNAGMVYEALGYFEMMQ---KEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFI 548
L +C+ EAL + E ++ M LI M+ + ++EA FD +
Sbjct: 264 LLNSCNTP----EALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRM 319
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
K D + WS IAG + G
Sbjct: 320 SKRDV----ISWSAMIAGYAQSG 338
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 462 bits (1190), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/779 (31%), Positives = 417/779 (53%), Gaps = 114/779 (14%)
Query: 79 SLLQECVNRKSLS-NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-------------- 123
+LLQ+ VN+ + A+++H ++K+G ++M L+NVY K G
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 124 -----------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+M+ + + FD LP+ + VSWT++I GY Q AI + +M
Sbjct: 78 RTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEM 137
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS- 225
+ G P+ TL L + ++ + GK++H+++VK + SV NSL ++Y+ CG
Sbjct: 138 MREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 226 ------------------------------LNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++ A+ F ++ E+++++W ++I + G
Sbjct: 198 MMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRG 257
Query: 256 EAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
++ L FSKML + + P+ FTL S+ S C + L +G Q+HS + G+ + V
Sbjct: 258 YDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVL 317
Query: 315 NSIMYLYLKCGLVD---------------------------------EAQKLFDGMSHVN 341
N+++ +Y +CG V+ EA+ +FD + +
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRD 377
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
+V W AMI G+ Q H EA+++F + +P+ YT +++L++ S L
Sbjct: 378 VVAWTAMIVGYEQ-----------HGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSL 426
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWTSM 460
+L G+QIH +K+G + V V AL+ MY K G I ASR F + R +SWTSM
Sbjct: 427 ASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSM 486
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I A H + +AL+LFE ML+ G+RP+ +T+VG +AC++AG+V + YF+MM+ K
Sbjct: 487 IIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDK 546
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
I P + HY C++D+F R G ++EA +FI+KM EP+ V W ++ CR + N++LG AA
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAA 606
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
E+LL L+P++ +Y+ L +++ + G+WE+ A ++ ++ ++ + +SWI +K KV++F
Sbjct: 607 ERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAF 666
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAF 695
DG+HPQ EI+ + ++ ++ K GY + L D +E +HSEKLAIAF
Sbjct: 667 GVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAF 726
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GL++TP + + ++K+ +C DCH IK I+ L REIIVRD+ R H F +G C+CRD+
Sbjct: 727 GLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 785
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 225/518 (43%), Gaps = 110/518 (21%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQ--------IHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
P ++L T L C++L + K +H V+K + N+L ++YS G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTG 63
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK------------------ 266
A K F+ + + SW TV+ A + G+ FF +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKN 123
Query: 267 -------------MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
M+ EGI+P++FTLT++ + L G +VHS +KLG N+ V
Sbjct: 124 IGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSV 183
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDL--------AKDDL 363
NS++ +Y KCG A+ +FD M ++ +WNAMIA H Q+ MDL A+ D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 364 SAHNG----------GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
N AL +FSK L S + PD +T +S+L+ C+ L L GEQIH+
Sbjct: 244 VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHS 303
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASR---------------------------- 444
+ TGF +V AL++MY +CG +E A R
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 445 -----VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+F + R +++WT+MI G+ H L +A+ LF M+ RPN T L+
Sbjct: 364 NEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVA 423
Query: 500 SNAGMVYEALGYFEMMQ----KEYKIKPVMDHYMCLIDMFVRLGCI---EEAFDFIKKMD 552
S+ +LG+ + + K +I V LI M+ + G I AFD I+
Sbjct: 424 SSLA----SLGHGKQIHGSAVKSGEIYSV-SVSNALITMYAKAGSITSASRAFDLIR--- 475
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKP 588
E + V W+ I +HG+ E E +L L+P
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 232/526 (44%), Gaps = 105/526 (19%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + + ++L + L + +H+ IVK G + V L+N+Y KCG+
Sbjct: 137 MMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 125 MEEAQKVFD-------------------------------NLPRINVVSWTSLISGYVQN 153
A+ VFD + ++V+W S+ISGY Q
Sbjct: 197 PMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQR 256
Query: 154 SQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
A+ +F ML P TL + L+AC++LE + +G+QIH+++V + V
Sbjct: 257 GYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIV 316
Query: 213 GNSLCSLYSTC---------------------------------GSLNSAIKAFNRIREK 239
N+L S+YS C G +N A F+ ++++
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDR 376
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+V++WT +I ++G + + F M+ E +PN +TL ++ SV ++ SL G Q+H
Sbjct: 377 DVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIH 436
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDL 358
+K G ++ V N+++ +Y K G + A + FD + + V+W +MI AQ
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQ---- 492
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
H EAL +F + G++PD T+ + + C+ + QG Q +
Sbjct: 493 -------HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV- 544
Query: 419 FLSDVVVGT-----ALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQ 472
D ++ T +V+++ + G ++ A +M +++W S+++
Sbjct: 545 ---DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLS---------- 591
Query: 473 ALQLFEDMLLAGVRPNQVTFV-----GALAACSNAGMVYEALGYFE 513
A ++++++ L V ++ + GA +A +N +Y A G +E
Sbjct: 592 ACRVYKNIDLGKVAAERLLLLEPENSGAYSALAN---LYSACGKWE 634
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S++ E + + + ++L + SL + + IH VK+G V L+ +Y K G
Sbjct: 403 SMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAG 462
Query: 124 NMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
++ A + FD + + VSWTS+I Q+ E A+ +F ML G P ++T
Sbjct: 463 SITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVF 522
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EK 239
+AC+ + G+Q + ++K + ++ + C L+ G L A + ++ E
Sbjct: 523 SACTHAGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 240 NVMSWTTVIGAC 251
+V++W +++ AC
Sbjct: 582 DVVTWGSLLSAC 593
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/693 (34%), Positives = 404/693 (58%), Gaps = 17/693 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +V + +LL+ V+ +HA++ K G D FV T L++ Y CGN++
Sbjct: 98 EGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDA 157
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++VFD + ++VSWT +++ Y +N E ++ +F M G P N T+ AL +C+
Sbjct: 158 ARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNG 217
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
LE+ ++GK +H +K + D VG +L LY+ G + A + F + + +++ W+ +
Sbjct: 218 LEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLM 277
Query: 248 IGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
I ++ ++ + L F +M S + PN FT S+ C +++ L +G Q+HS +K+G
Sbjct: 278 ISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVG 337
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
SN+ V N++M +Y KCG ++ + KLF G + N V WN +I G+ Q+ D
Sbjct: 338 LDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGD--------- 388
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +AL++FS + ++P T+SS+L + LVALE G QIH+LT+KT + D VV
Sbjct: 389 --GEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVA 446
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L++MY KCGRI+ A F +M + +SW ++I G++ H L +AL LF+ M + +
Sbjct: 447 NSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSK 506
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN++TFVG L+ACSNAG++ + +F+ M ++Y I+P ++HY C++ + R G +EA
Sbjct: 507 PNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVK 566
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
I ++ F+P+ ++W + C H N++LG A+++L+++P+D ++ +L +++ +A R
Sbjct: 567 LIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKR 626
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W++VA V+ +++K+ + SW+ + V+ F D HP IF +L+ L +K +
Sbjct: 627 WDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRD 686
Query: 667 FGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY S L D +E HSE+LA+AFGL+ P I ++K+ +C DCH
Sbjct: 687 AGYVPDCSVVLLDVEDDEKERLLWMHSERLALAFGLIQIPSGCSIRIIKNLRICVDCHAV 746
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK+++ + REI++RD R H F G C+C D+
Sbjct: 747 IKLVSKIVQREIVIRDINRFHHFRQGVCSCGDY 779
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 156/506 (30%), Positives = 262/506 (51%), Gaps = 24/506 (4%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ + SY ++LQ+ + + + + +H HI+K G+ D F L+N Y G +E+A K+
Sbjct: 1 MDSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKL 60
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD +P N VS+ +L G+ ++ Q + A + L + G T L S++
Sbjct: 61 FDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+HAYV K + D VG +L YS CG++++A + F+ I K+++SWT ++
Sbjct: 121 DTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACY 180
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
EN L F +M G +PN FT+++ C + + +VG VH +K+ Y +L
Sbjct: 181 AENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDL 240
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V +++ LY K G + EAQ+ F+ M +L+ W+ MI+ +AQ + E
Sbjct: 241 YVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQ-----------SDKSKE 289
Query: 372 ALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
AL +F ++ SS + P+ +TF+S+L C+ LV L G QIH+ LK G S+V V AL+
Sbjct: 290 ALELFCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALM 349
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y KCG IE + ++F + + ++W ++I G+ +AL LF +ML ++P +V
Sbjct: 350 DVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEV 409
Query: 491 TFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
T+ L A ++ G +L M K+ + LIDM+ + G I++A
Sbjct: 410 TYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVAN------SLIDMYAKCGRIDDAR 463
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHG 571
KMD + +EV W+ I G HG
Sbjct: 464 LTFDKMD-KQDEVSWNALICGYSIHG 488
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/688 (34%), Positives = 383/688 (55%), Gaps = 16/688 (2%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V SY L + C +SL++ +IH + +T + + L+ +Y CG+ + QKV
Sbjct: 85 VTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKV 144
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + N+VSW +IS Y +N + E AI +F DM +G P + + L +C +
Sbjct: 145 FDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFL 204
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGKQIH++V++ Q + +V ++C++Y CG L A F+ + +N ++WT ++
Sbjct: 205 ELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGY 264
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ + L F++M EG++ +EF + + VC + +G Q+HS +KLG S +
Sbjct: 265 TQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEV 324
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V ++ Y+KCG ++ A + F +S N V+W+A+I+G +Q L +
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL-----------ED 373
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+ IF+ L S G+ + + ++S+ C+ L G Q H +K G +S + +A+V
Sbjct: 374 CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVT 433
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCGR++ A R F + ++WT++I+G+A H + +AL F M GVRPN VT
Sbjct: 434 MYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVT 493
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G+V EA Y M ++Y +KP +DHY C+ID + R G ++EA + I +M
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRM 553
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
FEP+ + W + GC H +++LG AAE L +L P D Y +L +++ + G+WE+
Sbjct: 554 PFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAG 613
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE-----LVEKAKC 666
V+ L E +L + SWI +K +V+ F D HPQ+ I+ L+E + +
Sbjct: 614 HVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRL 673
Query: 667 FGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
+ S L+ + + HSEKLAIAFGL++T +PILV K+ CRDCH F K ++
Sbjct: 674 LNEEDDVSCSLSARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVS 733
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T R+I+VRDS R H F +G C+C D+
Sbjct: 734 MVTGRQIVVRDSTRFHHFKSGKCSCNDY 761
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/709 (34%), Positives = 394/709 (55%), Gaps = 25/709 (3%)
Query: 59 FQEA----LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQ++ L +L G ++ LL+ C + ++L +IH H G D +V T
Sbjct: 88 FQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTA 147
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRIN--VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+++Y KCG++ +AQ +F+++ + +V+W ++I+ + ++ IH M +AG
Sbjct: 148 LLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVT 207
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P + TL + L ++ GK IHAY ++ D+ + +L +Y+ C L A K
Sbjct: 208 PNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKI 267
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLS 291
FN + +KN + W+ +IG + L + ML G+ P TL ++ C +
Sbjct: 268 FNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTD 327
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L+ G ++H IK G + V NS++ +Y KCG++D A D M + V+++A+I+G
Sbjct: 328 LKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISG 387
Query: 352 HAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
Q NG E AL IF ++ SSG+ P L T ++L CS L AL+ G
Sbjct: 388 CVQ------------NGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCC 435
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H T+ GF +D + A+++MY KCG+I + +F M R +ISW +MI G+ H L
Sbjct: 436 HGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLC 495
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL LF+++ G++P+ VT + L+ACS++G+V E +F M + + IKP M HY+C
Sbjct: 496 VEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYIC 555
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA+ FI++M F PN IW +A CR H N+E+G ++++ L P+
Sbjct: 556 MVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEG 615
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
++ ++ +I+ S GRW+D A ++++ R ++ SW+ I ++ F HPQS
Sbjct: 616 TGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQS 675
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
A I K L EL+ + K GY+ SF L D +E +YHSEK+AIAFG+LNT S
Sbjct: 676 ASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQILLYHSEKVAIAFGILNTSPSSR 735
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
ILV K+ +C DCH+ IK IT LT REI VRD+ R H F +G C C+DF
Sbjct: 736 ILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHHFKDGICNCQDF 784
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 250/484 (51%), Gaps = 30/484 (6%)
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+ VFD +P+ +VV W +I Y + + +I+++L ML+ G PTN T L A
Sbjct: 57 IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVM 242
CSSL++++LG+ IH + D V +L +Y+ CG L A FN I ++++++
Sbjct: 117 CSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIV 176
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+W +I A + Q + ++M G+ PN TL SI G +L G +H+
Sbjct: 177 AWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYY 236
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ + N+ ++ +++ +Y KC L+ A+K+F+ ++ N V W+AMI G+
Sbjct: 237 IRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYV--------- 287
Query: 363 LSAHNGGTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
H+ ++AL+++ L G+ P T +++L C++L L++G+++H +K+G
Sbjct: 288 --LHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDL 345
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D VG +L++MY KCG ++ A EM + +S++++I+G + + +AL +F M
Sbjct: 346 DTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQ 405
Query: 482 LAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRL 538
+G+ P T + L ACS+ A + + + + + + D +C +IDM+ +
Sbjct: 406 SSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGF----TNDTSICNAIIDMYSKC 461
Query: 539 GCI---EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM--ELGFYAAEQLLKLKPKDCES 593
G I E FD ++ D + W+ I G HG L + Q L LKP D
Sbjct: 462 GKITISREIFDRMQNRDI----ISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTL 517
Query: 594 YAML 597
A+L
Sbjct: 518 IAVL 521
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 196/404 (48%), Gaps = 24/404 (5%)
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
++ D + L + + + A F++I + +V+ W +I +G Q +
Sbjct: 35 HRVSDSDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYL 94
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+ ML G+ P FT + C ++ +L++G +H+ LG + +L V +++++Y K
Sbjct: 95 YLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAK 154
Query: 324 CGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
CG + +AQ LF+ +SH ++V WNAMIA S H + + +++
Sbjct: 155 CGHLYQAQTLFNSISHQDRDIVAWNAMIAA-----------FSFHALHAQTIHSVAQMQQ 203
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
+G+ P+ T SIL + AL QG+ IHA ++ F +VV+ TAL++MY KC +
Sbjct: 204 AGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFY 263
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACS 500
A ++F ++ + + W++MI G+ H AL L++DML + G+ P T L AC+
Sbjct: 264 ARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACA 323
Query: 501 NAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
+ + M++ + + + LI M+ + G ++ A F+ +M + V
Sbjct: 324 QLTDLKRGKKLHCHMIKSGMDLDTTVGN--SLISMYAKCGIMDNAVGFLDEM-IAKDTVS 380
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
+S I+GC ++G YA + LL + A L+ ++
Sbjct: 381 YSAIISGCVQNG------YAEKALLIFRQMQSSGIAPYLETMIA 418
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 231/657 (35%), Positives = 388/657 (59%), Gaps = 26/657 (3%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D V L++++ K G++ ++VFD L VV WT LI+ Y Q+ + A+ +FLDML
Sbjct: 188 DVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDML 247
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---G 224
E G P TL + L+AC+ L S RLG+Q+H+ ++ E D+ V L +Y+
Sbjct: 248 ENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQ 307
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENG-EAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
SL++A + FNR+ + NVM+WT ++ + G + Q + F KML+EGI+PN T +S+
Sbjct: 308 SLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSML 367
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C + G Q+H+ +K A V N+++ +Y + G ++EA+ FD + N+V
Sbjct: 368 KACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMV 427
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+++ + G +G + + ++ + +TF S+++ + +
Sbjct: 428 SFSGNLDG---------------DGRSNTYQDY-QIERMELGISTFTFGSLISAAASVGM 471
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L +G+++HAL+LK GF SD +G +LV+MY +CG + A +VF EM+ +ISWTSMI+G
Sbjct: 472 LTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISG 531
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
A H + +AL+LF DM+ AGV+PN VT++ L+ACS+AG+V E +F MMQK + + P
Sbjct: 532 LAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIP 591
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
M+HY C++D+ R G +E+A DFI +M + + ++W + C+ H NM++G AA +
Sbjct: 592 RMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHV 651
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
++L+P+D Y +L +++ AG W+ VA +++L R++ L + SW+ + + ++ F+
Sbjct: 652 IQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAG 711
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
D HPQ+ EI+ L+ L+ + K GY S L D +E + HSEK+A+AFGL+
Sbjct: 712 DTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAFGLI 771
Query: 699 N-TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ T PI + K+ +C DCH+ +K ++ T REII+RDS R H+ +G C+C ++
Sbjct: 772 SCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEY 828
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 264/520 (50%), Gaps = 42/520 (8%)
Query: 96 IHAHIVKTGS--HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYV 151
+ H+++TGS D V L+ +Y KC + A+ VFD +P ++VSWT++ S
Sbjct: 69 LQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLS 128
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL-GKQIHAYVVKYQT-EDD 209
+N A+ +F + LE G P TL A AC + E L G + V K D
Sbjct: 129 RNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKLGFWGTD 188
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
SVG +L +++ G L + + F+ + E+ V+ WT +I ++G + + + F ML
Sbjct: 189 VSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLE 248
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC---GL 326
G QP+++TL+S+ S C + S R+G Q+HSL ++LG S+ V ++ +Y K
Sbjct: 249 NGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQS 308
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+ A+++F+ M N++ W A+++G+ Q ++D+ + + +F K+ + G++P
Sbjct: 309 LHNAREVFNRMPKHNVMAWTALLSGYVQRG--SQDN--------QVMILFCKMLNEGIRP 358
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ T+SS+L C+ L + G QIH +K+ VVG ALV+MY + G IE A F
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAF 418
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
++ + ++S++ + G S ++Q Q+ E M L G+ + TF ++A ++ GM+
Sbjct: 419 DQLYEKNMVSFSGNLDG-DGRSNTYQDYQI-ERMEL-GI--STFTFGSLISAAASVGMLT 473
Query: 507 EALGYFEM-MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+ + ++ + + + L+ M+ R G + +A +M+ + N + W+ I+
Sbjct: 474 KGQRLHALSLKAGFGSDRAIGN--SLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMIS 530
Query: 566 GCRRHGNMELGFYAAEQL--------LKLKPKDCESYAML 597
G +HG YAA L +KP D A+L
Sbjct: 531 GLAKHG------YAARALELFHDMIAAGVKPNDVTYIAVL 564
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 215/412 (52%), Gaps = 22/412 (5%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L +L G + + S+L C S + +H+ ++ G D V LV++Y K
Sbjct: 244 LDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKS 303
Query: 123 GN---MEEAQKVFDNLPRINVVSWTSLISGYVQ-NSQPELAIHVFLDMLEAGNYPTNVTL 178
N + A++VF+ +P+ NV++WT+L+SGYVQ SQ + +F ML G P ++T
Sbjct: 304 HNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITY 363
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L AC++L G+QIH + VK D VGN+L S+Y+ GS+ A AF+++ E
Sbjct: 364 SSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYE 423
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
KN++S++ G +G + + + + GI + FT S+ S ++ L G ++
Sbjct: 424 KNMVSFS---GNLDGDGRSNTYQDYQIERMELGI--STFTFGSLISAAASVGMLTKGQRL 478
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+L +K G+ S+ + NS++ +Y +CG + +A ++FD M+ N+++W +MI+G
Sbjct: 479 HALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISG------- 531
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKT 417
L+ H AL +F + ++G+KP+ T+ ++L+ CS +++G E +
Sbjct: 532 ----LAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHH 587
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHS 468
G + + +V++ + G +E A EM + + W +++ H+
Sbjct: 588 GLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHN 639
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 173/323 (53%), Gaps = 21/323 (6%)
Query: 191 IRLGKQIHAYVVKYQT--EDDTSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTT 246
I LG+ + ++++ + E D V NSL +LYS C ++ +A F+ + ++++SWT
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-GTMLSLRVGAQVHSLGIKL 305
+ NG + LR F + L EG+ PN FTL + + C + L G V L KL
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182
Query: 306 GY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G+ +++ V +++ ++ K G + +++FDG+ +V W +I +AQ S
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQ---------S 233
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
++ EA+ +F + +G +PD YT SS+L+ C+ L + G+Q+H+L L+ G SD
Sbjct: 234 GYS--DEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSC 291
Query: 425 VGTALVNMYKKCGR---IERASRVFVEMSTRTLISWTSMITGFANH-SLSHQALQLFEDM 480
V LV+MY K + A VF M +++WT++++G+ S +Q + LF M
Sbjct: 292 VSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKM 351
Query: 481 LLAGVRPNQVTFVGALAACSNAG 503
L G+RPN +T+ L AC+N G
Sbjct: 352 LNEGIRPNHITYSSMLKACANLG 374
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 40/320 (12%)
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+QP+E ++ + L Q H L ++ V NS++ LY KC V A+
Sbjct: 45 LQPSEAAALLTAAARARDIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAAR 104
Query: 332 KLFDGM--SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
+FDGM +LV+W AM + LS + EAL +F + G+ P+ +
Sbjct: 105 SVFDGMPVGLRDLVSWTAMASC-----------LSRNGAEAEALRLFGETLEEGLLPNAF 153
Query: 390 TFSSILTIC--SRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVF 446
T + C S L L G + L K GF +DV VG AL++M+ K G + RVF
Sbjct: 154 TLCAATQACFASELFHLAGG-AVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVF 212
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+ RT++ WT +IT +A S +A++LF DML G +P+Q T L+AC+
Sbjct: 213 DGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTE----- 267
Query: 507 EALGYFEMMQKEYK--IKPVMDHYMC----LIDMFVR------LGCIEEAFDFIKKMDFE 554
LG F + Q+ + ++ ++ C L+DM+ + L E F+ + K
Sbjct: 268 --LGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPK---- 321
Query: 555 PNEVIWSVFIAGCRRHGNME 574
N + W+ ++G + G+ +
Sbjct: 322 HNVMAWTALLSGYVQRGSQD 341
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 460 bits (1183), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/757 (33%), Positives = 431/757 (56%), Gaps = 28/757 (3%)
Query: 13 TLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQ-LNGNSEPVRSLGFQEALSVLTEGPK 71
TL +KS P ++ + + ++ S S +I N ++++ + L +L +G
Sbjct: 95 TLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQL-LLQDGVY 153
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF-VMTFLVNVYGK---CGNMEE 127
+ ++++ C+ + ++KTG V L++++ K ++E
Sbjct: 154 PNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLES 213
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACS 186
A+KVFD + NVV+WT +I+ Q + AI +FL+ML + Y P TL ++ C+
Sbjct: 214 ARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCA 273
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++ + LGK++H++V++ D VG SL +Y+ CG + A K F+ +RE NVMSWT
Sbjct: 274 EIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTA 333
Query: 247 VIGAC--GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
++ G G + +R FS ML +G + PN FT + + C ++ G QVH I
Sbjct: 334 LVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTI 393
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL-AKDD 362
KLG ++ V N ++ +Y K G ++ A+K FD + NLV+ + + + +L ++ D
Sbjct: 394 KLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQD 453
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
L E + S ++S +T++S+L+ + + + +GEQIHA+ +K GF +D
Sbjct: 454 LD-----REVEYVGSGVSS-------FTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTD 501
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+ V AL++MY KCG E A +VF +M +I+WTS+I GFA H + +AL+LF +ML
Sbjct: 502 LSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLE 561
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
GV+PN VT++ L+ACS+ G++ EA +F M+ + I P M+HY C++D+ R G +
Sbjct: 562 TGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLS 621
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA +FI M F+ + ++W F+ CR H N +LG +AA+ +L+ +P D +Y +L +++
Sbjct: 622 EAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYA 681
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
+ GRWEDVA ++ +++++++ SWI ++++V+ F D LHP++ +I++ LDEL
Sbjct: 682 TEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELAL 741
Query: 663 KAKCFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
K K GY F L D +E Y HSEKLA+AF L++TP PI V K+ +C D
Sbjct: 742 KIKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGD 801
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH IK I+ ++ REI+VRD+ R H +G C+C D+
Sbjct: 802 CHTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDY 838
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 270/549 (49%), Gaps = 38/549 (6%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
T K+ TSS LL++C+ K+ +++H + + D ++ L+ +Y K +
Sbjct: 47 THNNKLITSSL--LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPI 104
Query: 127 EAQKVFDNL--PRINVVSWTSLISGYVQNSQPELAIHVFLD-MLEAGNYPTNVTLGTALT 183
A +F ++ + +VVS++S+IS + N A+ +F +L+ G YP +
Sbjct: 105 TAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIR 164
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSLCSLY---STCGSLNSAIKAFNRIREK 239
AC + G + +V+K D VG L ++ + L SA K F+++REK
Sbjct: 165 ACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREK 224
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
NV++WT +I + G + + F +ML S G P+ FTLT + SVC + L +G ++
Sbjct: 225 NVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKEL 284
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HS I+ G +L V S++ +Y KCGLV EA+K+FDGM N+++W A++ G+ +
Sbjct: 285 HSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVR---- 340
Query: 359 AKDDLSAHNGG---TEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
GG EA+ +FS L G+ P+ +TFS +L C+ L + GEQ+H T
Sbjct: 341 --------GGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQT 392
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM-ITGFANHSL-SHQ 472
+K G + VG LV++Y K GR+E A + F + + L+S T + T + +L S Q
Sbjct: 393 IKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ 452
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
L + + +GV + T+ L+ + G + + M+ K + + LI
Sbjct: 453 DLDREVEYVGSGV--SSFTYASLLSGAACIGTIGKGEQIHAMVVK-IGFRTDLSVNNALI 509
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG----NMELGFYAAEQLLKLKP 588
M+ + G E A M+ + N + W+ I G +HG +EL + E +KP
Sbjct: 510 SMYSKCGNKEAALQVFNDME-DCNVITWTSIINGFAKHGFASKALELFYNMLET--GVKP 566
Query: 589 KDCESYAML 597
D A+L
Sbjct: 567 NDVTYIAVL 575
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/750 (33%), Positives = 406/750 (54%), Gaps = 81/750 (10%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ Y SLL+ C ++ + A+ +H I+KT + F+ L+ Y K GN+ A VFD
Sbjct: 5 SNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFD 64
Query: 134 NLPRINVVSWTSL-------------------------------ISGYVQNSQPELAIHV 162
++P+ N+ SW ++ ISGY A+ V
Sbjct: 65 HIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRV 124
Query: 163 FLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
+ ML+ N +T T L CS + LG+QI+ ++K+ D VG+ L +Y+
Sbjct: 125 YKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYT 184
Query: 222 TCGSLNSAIKAFNRIREKNV-------------------------------MSWTTVIGA 250
G + A + F+ + E+NV +SWT +I
Sbjct: 185 KLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG + L F +M G ++FT S+ + CG++L+L G Q+H+ I+ + N
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
+ V ++++ +Y KC + A+ +F M N+++W AM+ G+ Q NG
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQ------------NGFS 352
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ IF ++ +G++PD +T S+++ C+ L +LE+G Q H L +G +S + V AL
Sbjct: 353 EEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL 412
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ +Y KCG E + R+F EM+ R +SWT+++ G+A +++ + LFE ML G++P+
Sbjct: 413 ITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDG 472
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VTF+G L+ACS AG+V + L YFE M KE+ I P++DH C+ID+ R G +EEA +FI
Sbjct: 473 VTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFIN 532
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M P+ V W+ ++ CR HG+ME+G +AA+ L+ L+P++ SY +L ++ S G+W+
Sbjct: 533 NMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDK 592
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
VA ++ R++++ + +SWI+ K KV+ F +D P +I+ L++L K GY
Sbjct: 593 VAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLNYKMIEEGY 652
Query: 670 KQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
S L D EES + +HSEKLAIAFGL+ P PI V+K+ +C DCHN K
Sbjct: 653 VPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPPGLPIRVIKNLRVCGDCHNATKF 712
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REI+VRD+ R H F +G C+C DF
Sbjct: 713 ISKITQREILVRDAVRFHLFKDGTCSCGDF 742
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 165/317 (52%), Gaps = 11/317 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E G + ++ S+L C + +L + IHA++++T + FV + L
Sbjct: 252 REALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSAL 311
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KC +++ A+ VF +P+ NV+SWT+++ GY QN E A+ +F +M G P +
Sbjct: 312 VDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDD 371
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
TLG+ +++C++L S+ G Q H + +V N+L +LY CGS ++ + F
Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTE 431
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++ +SWT ++ + G+A + + F +ML+ G++P+ T + S C + G
Sbjct: 432 MNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKG 491
Query: 296 AQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA--- 350
Q IK G + I+ L + G ++EA+ + M H ++V W +++
Sbjct: 492 LQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCR 551
Query: 351 --GHAQMMDLAKDDLSA 365
G ++ A D L A
Sbjct: 552 VHGDMEIGKWAADSLIA 568
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 241/705 (34%), Positives = 381/705 (54%), Gaps = 22/705 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+A+ V E G + + ++ C + L +H +V+TG +D F LV
Sbjct: 188 DAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALV 247
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y K G++E A VF+ +P +VVSW + ISG V + A+ + L M +G P
Sbjct: 248 DMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVF 307
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL + L AC+ + LG+QIH ++VK + D V L +Y+ G L+ A K F+ +
Sbjct: 308 TLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFM 367
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTMLSLRV 294
++++ W +I C +G + L F +M EG+ N TL S+ + ++
Sbjct: 368 PRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICH 427
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
QVH+L K+G S+ V N ++ Y KCG +D A K+F ++++ M+
Sbjct: 428 TRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTA--- 484
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LS + G +A+ +F ++ G++PD + SS+L C+ L A EQG+Q+HA
Sbjct: 485 --------LSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHL 536
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K F SDV G ALV Y KCG IE A F + R ++SW++MI G A H +AL
Sbjct: 537 IKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRAL 596
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF ML GV PN +T L+AC++AG+V +A YFE M++ + I +HY C+ID+
Sbjct: 597 DLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDI 656
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G +E+A + + M F+ N +W + R H + ELG AAE+L L+P+ ++
Sbjct: 657 LGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTH 716
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L + + SAG W+++A V+ L ++ + + SW+ IKDKV++F D HP + +I+
Sbjct: 717 VLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIY 776
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVV 709
L EL + GY +L D + + +HSE+LA+AF L++TP +PI V
Sbjct: 777 GKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAPIRVK 836
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +CRDCH K I+ + +REII+RD R H F NG C+C D+
Sbjct: 837 KNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDY 881
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 239/485 (49%), Gaps = 23/485 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI----NVVSWTSLISGYV 151
+HA V T D FV LV VYG G ++EA+++FD + N VSW ++IS YV
Sbjct: 122 VHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYV 181
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+N Q AI VF +M+ +G P + AC+ + G+Q+H VV+ E D
Sbjct: 182 KNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVF 241
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
N+L +YS G + A F ++ +V+SW I C +G + L +M S G
Sbjct: 242 TANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSG 301
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ PN FTL+S+ C + +G Q+H +K + V ++ +Y K G +D+A+
Sbjct: 302 LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDAR 361
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDL-- 388
K+FD M +L+ WNA+I+G +H+G E LS+F ++ G+ D+
Sbjct: 362 KVFDFMPRRDLILWNALISG------------CSHDGRHGEVLSLFHRMRKEGLDLDVNR 409
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T +S+L + A+ Q+HAL K G LSD V L++ Y KCG+++ A +VF E
Sbjct: 410 TTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+ +IS T+M+T + A++LF ML G+ P+ L AC++ +
Sbjct: 470 SRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG 529
Query: 509 LG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+ ++++++ + L+ + + G IE+A D E V WS I G
Sbjct: 530 KQVHAHLIKRQFTSDVFAGN--ALVYAYAKCGSIEDA-DMAFSGLPERGIVSWSAMIGGL 586
Query: 568 RRHGN 572
+HG+
Sbjct: 587 AQHGH 591
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 228/472 (48%), Gaps = 29/472 (6%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
+SL +H+H++K+G F L+ +Y +C A+ VFD +P VSW+SL+
Sbjct: 18 RSLFAGAHLHSHLLKSGLLAGF--SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLV 75
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
+ Y N P A+ F M G P N + C+ +R G Q+HA V +
Sbjct: 76 TAYSNNGMPRDALLAFRAMRGRG-VPCNEFALPVVLKCAP--DVRFGAQVHALAVATRLV 132
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRI----REKNVMSWTTVIGACGENGEAVQGLRF 263
D V N+L ++Y G ++ A + F+ E+N +SW T+I A +N ++ +
Sbjct: 133 HDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGV 192
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F +M+ G +PNEF + + + C L G QVH ++ GY ++ N+++ +Y K
Sbjct: 193 FREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSK 252
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
G ++ A +F+ M ++V+WNA I+G H AL + ++ SSG
Sbjct: 253 LGDIEMAATVFEKMPAADVVSWNAFISG-----------CVTHGHDHRALELLLQMKSSG 301
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
+ P+++T SS+L C+ A G QIH +K D V LV+MY K G ++ A
Sbjct: 302 LVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDAR 361
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG--VRPNQVTFVGALAACSN 501
+VF M R LI W ++I+G ++ + L LF M G + N+ T L + ++
Sbjct: 362 KVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTAS 421
Query: 502 AGMVYEALGYFEMMQK-EYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
+ EA+ + + KI + D ++ LID + + G ++ A K+
Sbjct: 422 S----EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKE 469
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 212/416 (50%), Gaps = 43/416 (10%)
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T T+G+AL + S+ G +H++++K N L +LYS C ++A F
Sbjct: 3 TPETIGSALARFGTSRSLFAGAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVF 60
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ I + +SW++++ A NG L F M G+ NEF L + C +R
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CAP--DVR 117
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV----NLVTWNAMI 349
GAQVH+L + ++ V N+++ +Y G+VDEA+++FD V N V+WN MI
Sbjct: 118 FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMI 177
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+ + K+D S +A+ +F ++ SG +P+ + FS ++ C+ LE G Q
Sbjct: 178 SAY------VKNDQSG-----DAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQ 226
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H ++TG+ DV ALV+MY K G IE A+ VF +M ++SW + I+G H
Sbjct: 227 VHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGH 286
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK--EYKIKPVMDH 527
H+AL+L M +G+ PN T L AC+ AG F + ++ + +K V D
Sbjct: 287 DHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGA-------FNLGRQIHGFMVKAVADF 339
Query: 528 ----YMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCR---RHGNM 573
+ L+DM+ + G +++A FDF+ + D ++W+ I+GC RHG +
Sbjct: 340 DEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDL----ILWNALISGCSHDGRHGEV 391
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/725 (32%), Positives = 415/725 (57%), Gaps = 72/725 (9%)
Query: 102 KTGSHQDF------------FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
KTG H D F +++ Y K G +E+A +VFD +P + VSWT++I G
Sbjct: 22 KTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVG 81
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY----- 204
Y Q + E AI +F+DM++ PT TL L +C++ S +GK++H++VVK
Sbjct: 82 YNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHAC 141
Query: 205 ------------QTED--------------DTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+T D +TS N++ SL+ CG ++ A+ F + E
Sbjct: 142 VPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSE 201
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++++SW ++I C ++G + L+FFS +L + ++P+ F+L S S C + L G Q
Sbjct: 202 RDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQ 261
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD--GMSHVNLVTWNAMIAGHAQM 355
+H ++ + ++ V N+++ +Y K G V+ A+++ + G+S ++++ + A++ G+ ++
Sbjct: 262 IHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKL 321
Query: 356 MDLA---------KD-DLSA---------HNG-GTEALSIFSKLNSSGMKPDLYTFSSIL 395
D+ KD D+ A NG +A+ +F + S G +P+ +T +++L
Sbjct: 322 GDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAML 381
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTL 454
+ S + +L G+QIHA +++G VG AL MY K G I A +VF + R
Sbjct: 382 SASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDT 441
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SWTSMI A H L +A++LFE ML G++P+ +T+VG L+AC++ G+V + YF++
Sbjct: 442 VSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDL 501
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ +KI P + HY C++D+F R G ++EA+ F++ M EP+ + W ++ C+ + N++
Sbjct: 502 MKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVD 561
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AAE+LL ++P + +Y+ L +++ S G+W+D A ++ L + + + SW++I+
Sbjct: 562 LAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQIQ 621
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
+K + F DGLHPQ EI+K++D++ ++ K G+ L D ++ YHSE
Sbjct: 622 NKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVKDQILRYHSE 681
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFG+++TP + + ++K+ +C DCHN IK I+ L REIIVRD+ R H F +G C
Sbjct: 682 KLAIAFGIISTPENTTLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDATRFHHFKDGSC 741
Query: 750 TCRDF 754
+C+D+
Sbjct: 742 SCKDY 746
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/538 (26%), Positives = 252/538 (46%), Gaps = 97/538 (18%)
Query: 59 FQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F++A+ + + KV + + ++L C S + +H+ +VK G H V
Sbjct: 88 FEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANS 147
Query: 115 LVNVYGKCGNMEEAQKVFD------------------NLPRI-------------NVVSW 143
L+N+Y K G+++ A+ VFD N R+ ++VSW
Sbjct: 148 LLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSW 207
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVV 202
S+I+G Q+ A+ F +L+ + P +L +AL+AC++LE + GKQIH Y+V
Sbjct: 208 NSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIV 267
Query: 203 KYQTEDDTSVGNSLCSLYSTCGS------------------------LNSAIK------- 231
+ + +VGN+L S+Y+ G LN +K
Sbjct: 268 RTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPA 327
Query: 232 --AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
FN +++ +V++WT +I +NG + F M+SEG +PN FTL ++ S ++
Sbjct: 328 RQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSV 387
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAM 348
SL G Q+H+ I+ G A + V N++ +Y K G ++ A+K+F+ + + + V+W +M
Sbjct: 388 TSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSM 447
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I AQ H G EA+ +F ++ + G+KPD T+ +L+ C+ +EQG
Sbjct: 448 IMALAQ-----------HGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGR 496
Query: 409 QIHALTLKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITG--- 463
L + + A +V+++ + G ++ A + M +I+W S+++
Sbjct: 497 SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKV 556
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ N L+ A E +LL + PN GA +A +N VY + G ++ K K+
Sbjct: 557 YKNVDLAKVAA---ERLLL--IEPNN---SGAYSALAN---VYSSCGKWDDAAKIRKL 603
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 68/376 (18%)
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA--------- 353
+KLG ++ + N++M LY K G +A LF+ M +WN +++G+A
Sbjct: 2 VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61
Query: 354 QMMDL--AKDDLS------AHN--GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
Q+ DL +D +S +N G E A+ IF + + P +T +++L C+
Sbjct: 62 QVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATG 121
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK--------------------------- 435
+ G+++H+ +K G + V V +L+NMY K
Sbjct: 122 SRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMIS 181
Query: 436 ----CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-AGVRPNQV 490
CGR++ A F +S R ++SW SMI G H ++ALQ F +L ++P++
Sbjct: 182 LHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRF 241
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY----MCLIDMFVRLGCIEEAFD 546
+ AL+AC+N E L + + + Y ++ + D LI M+ + G +E A
Sbjct: 242 SLASALSACAN----LEKLSFGKQIHG-YIVRTMFDASGAVGNALISMYAKSGGVEIARR 296
Query: 547 FIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLK-LKPKDCESYAMLLDIFVSA 604
I++ +VI ++ + G + G++ A Q+ LK D ++ ++ +V
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDIT----PARQIFNSLKDPDVVAWTAMIVGYVQN 352
Query: 605 GRWED-VAVVKNLTRE 619
G D + V K + E
Sbjct: 353 GLNNDAIEVFKTMVSE 368
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
[Vitis vinifera]
Length = 1005
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/691 (33%), Positives = 379/691 (54%), Gaps = 19/691 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++ S VS L + IH ++ D V T L+ +Y KCG E+A++
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F L ++V+W+++I+ VQ PE A+ +F +M P VTL + L AC+ L
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++LGK IH + VK + D S G +L S+Y+ CG +A+ FNR+ +++++W ++I
Sbjct: 446 LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G+ + F K+ I P+ T+ + C + L G +H L +KLG+ S+
Sbjct: 506 YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
V+N+++ +Y KCG + A+ LF+ + VTWN +IA + Q NG
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ------------NGH 613
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+S F ++ P+ TF S+L + L A +G HA ++ GFLS+ +VG +
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 673
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY KCG+++ + ++F EM + +SW +M++G+A H +A+ LF M + V+ +
Sbjct: 674 LIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 733
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
V+FV L+AC +AG+V E F M +Y IKP ++HY C++D+ R G +E FI
Sbjct: 734 SVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 793
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K M EP+ +W + CR H N++LG A + L+KL+P++ + +L I+ +GRW
Sbjct: 794 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 853
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
D ++ + L +T SW+ +K+KV++F+ D HPQ + + + L+EK + G
Sbjct: 854 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Query: 669 YKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y S E D+E HSE+LAI F LLNTP S I +VK+ +C DCH K
Sbjct: 914 YVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTK 973
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T R IIVRD+ R H F +G C+C D+
Sbjct: 974 FISKITTRRIIVRDATRFHHFEDGICSCNDY 1004
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 261/540 (48%), Gaps = 38/540 (7%)
Query: 59 FQEALSVLTEGPKVQTSSYVS------LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
F + +E P + +S+Y + LL C K L+ IHA I+ +G + +
Sbjct: 11 FTSIATAASEFPSLSSSTYTNYLHYPRLLSSC---KHLNPLLQIHAQIIVSG-FKHHHSI 66
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T L+N+Y + A+ VFD+ P + + W S+I Y ++ Q A+ ++ M+E G
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P T L AC+ +++ G H + + E D +G L +YS G L A +
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+++ +++V++W +I ++ + + + FF M G++P+ +L ++ + ++
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
+ +H + ++S V N ++ LY KCG VD A+++FD M + V+W M+AG+
Sbjct: 247 ELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 353 AQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
AHNG E L +F K+ ++ + + S + + LE+G++IH
Sbjct: 305 ------------AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L+ SD++V T L+ MY KCG E+A ++F + R L++W+++I
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-- 529
+AL LF++M ++PN+VT + L AC++ ++ LG + +K MD +
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLL--KLG---KSIHCFTVKADMDSDLST 467
Query: 530 --CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
L+ M+ + G A +M + V W+ I G + G+ + A + KL+
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGD---PYNAIDMFYKLR 523
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 251/752 (33%), Positives = 405/752 (53%), Gaps = 84/752 (11%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYGKCGNMEEAQKVF 132
+S Y +LL R A +H I++T H +++ L+ YGK G A++VF
Sbjct: 6 SSQYAALLSAAA-RTEPHVAGALHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVF 64
Query: 133 DNLPRIN-------------------------------VVSWTSLISGYVQNSQPELAIH 161
D +P N +VS+ ++I+G+ A+
Sbjct: 65 DAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVR 124
Query: 162 VFLDMLEAGN--YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
V+L +L+A + P+ +T+ T + A S+L LGKQ H +++ + VG+ L +
Sbjct: 125 VYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDM 184
Query: 220 YSTCGSLNSAIKAFNRIREKNV-------------------------------MSWTTVI 248
Y+ + A +AF+ + KNV ++WTT++
Sbjct: 185 YAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMV 244
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG + L F +M +GI +++T SI + CG + +L G Q+H+ I+ Y
Sbjct: 245 TGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYD 304
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N+ V ++++ +Y KC + A+ +F M+ N+++W A+I G+ Q NG
Sbjct: 305 DNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQ------------NG 352
Query: 369 GTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+E A+ +FS++ G+ PD YT S+++ C+ L +LE+G Q H L L +G + + V
Sbjct: 353 CSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSN 412
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV +Y KCG IE A R+F EMS +SWT++++G+A + + + LFE ML GV+P
Sbjct: 413 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKP 472
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTF+G L+ACS AG V + YF MQK++ I P+ DHY C+ID++ R G ++EA +F
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEF 532
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
IK+M P+ + W ++ CR G+ME+G +AAE LL++ P++ SY +L + + G+W
Sbjct: 533 IKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQW 592
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+VA ++ R+ ++ + SWI+ K+KV+ F +D HP S I++ L+ L K
Sbjct: 593 NEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSKGIYEKLEWLNSKMLEE 652
Query: 668 GYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GYK S L TD+ +HSEKLAIAFGL+ P PI +VK+ +C DCHN
Sbjct: 653 GYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQEMPIRIVKNLRVCVDCHNAT 712
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ +T R+I+VRD+ R HKF +G C+C DF
Sbjct: 713 KFISKITGRDILVRDAVRFHKFSDGVCSCGDF 744
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 153/297 (51%), Gaps = 6/297 (2%)
Query: 61 EALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + +G + ++ S+L C +L + IHA+I++T + FV + LV
Sbjct: 255 EALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALV 314
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KC +++ A+ VF + N++SWT+LI GY QN E A+ VF +M G P +
Sbjct: 315 DMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDY 374
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TLG+ +++C++L S+ G Q H + +V N+L +LY CGS+ A + F+ +
Sbjct: 375 TLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEM 434
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG- 295
+ +SWT ++ + G A + + F KML++G++P+ T + S C + G
Sbjct: 435 SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGR 494
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ HS+ G ++ LY + G + EA++ M H + + W +++
Sbjct: 495 SYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 234/626 (37%), Positives = 369/626 (58%), Gaps = 17/626 (2%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P+ N+VSWT++ISG QNS+ AI F M G PT +A+ AC+SL SI +G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+H +K+ + VG++L +YS CG++ A K F + K+ +SWT +I +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
GE + L F KM+ E + ++ L S CG + + + G VHS +KLG+ S++ V
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N++ +Y K G ++ A +F S N+V++ +I G+ + + K L
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEK-----------GL 229
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
S+F +L G++P+ +TFSS++ C+ ALEQG Q+HA +K F D V + LV+MY
Sbjct: 230 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 289
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E+A + F E+ T I+W S+++ F H L A+++FE M+ GV+PN +TF+
Sbjct: 290 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 349
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L CS+AG+V E L YF M K Y + P +HY C+ID+ R G ++EA +FI +M F
Sbjct: 350 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 409
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EPN W F+ CR HG+ E+G AAE+L+KL+PK+ + +L +I+ + +WEDV V
Sbjct: 410 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 469
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-KQQ 672
+ R+ + + +SW+ + K + F D HP+ + I++ LD L+++ K GY +
Sbjct: 470 RMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRT 529
Query: 673 ESFELTDEESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
+S L ++S HSE++A+AF L++ PI PI+V K+ +C DCH+ IK I+ +
Sbjct: 530 DSVPLDMDDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKV 589
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T R+IIVRD+ R H F +G C+C D+
Sbjct: 590 TGRKIIVRDNSRFHHFTDGSCSCGDY 615
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 221/434 (50%), Gaps = 19/434 (4%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
+ + VS+ S L Q + SE +R+ + + E P ++ S ++ C + S+
Sbjct: 3 QRNLVSWTAMISGLSQNSKFSEAIRTFC---GMRICGEVP--TQFAFSSAIRACASLGSI 57
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ +H +K G + FV + L ++Y KCG M +A KVF+ +P + VSWT++I GY
Sbjct: 58 EMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGY 117
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
+ + E A+ F M++ L + L AC +L++ + G+ +H+ VVK E D
Sbjct: 118 SKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDI 177
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
VGN+L +YS G + SA F E +NV+S+T +I E + +GL F ++
Sbjct: 178 FVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRR 237
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+GI+PNEFT +S+ C +L G Q+H+ +K+ + + V + ++ +Y KCGL+++
Sbjct: 238 QGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQ 297
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A + FD + + WN++++ Q H G +A+ IF ++ G+KP+
Sbjct: 298 AIQAFDEIGDPTEIAWNSLVSVFGQ-----------HGLGKDAIKIFERMVDRGVKPNAI 346
Query: 390 TFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TF S+LT CS +E+G + +++ G + + ++++ + GR++ A
Sbjct: 347 TFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINR 406
Query: 449 MSTR-TLISWTSMI 461
M W S +
Sbjct: 407 MPFEPNAFGWCSFL 420
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 6/207 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++ LSV E G + ++ SL++ C N+ +L +HA ++K +D FV + L
Sbjct: 226 EKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSIL 285
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++YGKCG +E+A + FD + ++W SL+S + Q+ + AI +F M++ G P
Sbjct: 286 VDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNA 345
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T + LT CS + G ++ Y + + L G L A + N
Sbjct: 346 ITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFIN 405
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQG 260
R+ E N W + +GAC +G+ G
Sbjct: 406 RMPFEPNAFGWCSFLGACRIHGDKEMG 432
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/690 (32%), Positives = 383/690 (55%), Gaps = 15/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V SY L + C KSL + + H + +T + F+ ++ +Y KCG++ +A
Sbjct: 5 GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVFD + N+VSW ++IS Y +N + +F +MLE P T L + +
Sbjct: 65 RKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNP 124
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ +GKQIH++ ++ + SV ++ ++Y CG L A F ++ EKN ++WT ++
Sbjct: 125 SGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIM 184
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ + L F+KM++EG++ +E+ + + C + L G Q+H +KLG
Sbjct: 185 VGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLE 244
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V ++ Y+KC ++ A K F+ +S N V+W+A+I G+ QM +
Sbjct: 245 SEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEF---------- 294
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL F L + + + +T++SI CS L G Q HA +K+ ++ +A
Sbjct: 295 -EEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESA 353
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
++ MY +CGR++ A+RVF + ++WT++I G+A + +AL+LF M GVRPN
Sbjct: 354 MITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPN 413
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+ L ACS++G+V E Y E M Y + +DHY C++D++ R G ++EA + I
Sbjct: 414 AVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELI 473
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M F P+ + W + GC + N+E+G AAE L +L P+D Y ++ +++ S G+W+
Sbjct: 474 RSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWK 533
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL----DELVEKA 664
+ A V+ + E L + SWI +K KV+ F D HPQ+ EI+ L D ++++
Sbjct: 534 EAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEALNDSVIKEE 593
Query: 665 KCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
++ S L + + + HSE+LA+AFGL++TP +P++V K+ C+DCH+F K
Sbjct: 594 TGLLTEEDVSNSLPERKEQLLVHSERLALAFGLISTPSSAPVVVFKNLRACKDCHDFGKQ 653
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ +T REI+VRDS R H F G C+C D+
Sbjct: 654 VSLITGREIVVRDSFRFHHFKLGECSCNDY 683
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ +G+ ++ + C ++ +L G H +T + +++ MY KCG
Sbjct: 1 MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A +VF EM R L+SW ++I+ +A + + + +F +ML +PN T++G L +
Sbjct: 61 LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120
Query: 499 CSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
N +G+ + ++ ++ + +M+V+ G +E A +KM E N
Sbjct: 121 LLNPSGLEIGKQIHSHAIRSGLGSNASVN--TAISNMYVKCGWLEGAELVFEKMS-EKNA 177
Query: 558 VIWSVFIAG 566
V W+ + G
Sbjct: 178 VAWTGIMVG 186
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 231/656 (35%), Positives = 383/656 (58%), Gaps = 30/656 (4%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D V + L+++ + G++ A+KVFD L VV WT LIS YVQ E A+ +FLD L
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG--- 224
E G P T+ + ++AC+ L S+RLG Q+H+ ++ D V L +Y+
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENG-EAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
+++ A K F R+R+ +V+SWT +I ++G + + + F +ML+E I+PN T +SI
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C + G QVH+ IK A+ V N+++ +Y + G ++EA+++F+ + +++
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI 426
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+ + G +D H G + I S TF+S+++ + +
Sbjct: 427 S--CITEGRDAPLD--------HRIGRMDMGISSS-----------TFASLISAAASVGM 465
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L +G+Q+HA+TLK GF SD V +LV+MY +CG +E A R F E+ R +ISWTSMI+G
Sbjct: 466 LTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
A H + +AL LF DM+L GV+PN VT++ L+ACS+ G+V E YF MQ+++ + P
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIP 585
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
M+HY C++D+ R G ++EA +FI +M + + ++W + CR H N+E+G AA+ +
Sbjct: 586 RMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNV 645
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
++L+P+D Y +L +++ AG W++VA +++ R+ L++ SW+ +++ + F+
Sbjct: 646 IELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAG 705
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
D HP++ +I+ LD LV + K GY S L D +E + HSEK+A+AFGL+
Sbjct: 706 DTSHPRAQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLI 765
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
T PI + K+ +C DCH+ IK ++ T REII+RDS R H+ +G C+C ++
Sbjct: 766 TTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEY 821
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 258/509 (50%), Gaps = 50/509 (9%)
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLD 165
+D V L+ +Y +CG + A+ VFD + + ++VSWT++ S +N ++ + +
Sbjct: 82 RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGE 141
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT---EDDTSVGNSLCSLYST 222
MLE+G P TL AC E + + ++ D +VG++L + +
Sbjct: 142 MLESGLLPNAYTLCAVAHACFPHE-LYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLAR 200
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVI-----GACGENGEAVQGLRFFSKMLSEGIQPNEF 277
G L SA K F+ + EK V+ WT +I G C E EAV+ F L +G +P+ +
Sbjct: 201 NGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAE--EAVE---IFLDFLEDGFEPDRY 255
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL---VDEAQKLF 334
T++S+ S C + S+R+G Q+HSL +++G+AS+ V ++ +Y K + +D A K+F
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYANKVF 315
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFS 392
+ M ++++W A+I+G+ Q +G E + +F ++ + +KP+ T+S
Sbjct: 316 ERMRKNDVISWTALISGYVQ------------SGVQENKVMVLFGEMLNESIKPNHITYS 363
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
SIL C+ + + G Q+HA +K+ + VG ALV+MY + G +E A RVF ++ R
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++I S IT + L H+ ++ DM ++ TF ++A ++ GM+ +
Sbjct: 424 SMI---SCITEGRDAPLDHRIGRM--DMGIS-----SSTFASLISAAASVGMLTKGQQLH 473
Query: 513 EMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
M K D ++ L+ M+ R G +E+A ++ + N + W+ I+G +H
Sbjct: 474 AMT---LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISGLAKH 529
Query: 571 GNME--LGFYAAEQLLKLKPKDCESYAML 597
G E L + L +KP D A+L
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVL 558
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 190/367 (51%), Gaps = 30/367 (8%)
Query: 191 IRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVI 248
+RLG+ +H +++ D D V NSL +LYS CG++ SA F+ +R ++++SWT +
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT-----MLSLRVGAQVHSLGI 303
NG + L +ML G+ PN +TL +++ C ++ V VH +G+
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ +++ V ++++ + + G + A+K+FDG+ +V W +I+ + Q
Sbjct: 184 ---WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQ--------- 231
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA+ IF G +PD YT SS+++ C+ L ++ G Q+H+L L+ GF SD
Sbjct: 232 --GECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDA 289
Query: 424 VVGTALVNMYKKCG---RIERASRVFVEMSTRTLISWTSMITGFANHSLS-HQALQLFED 479
V LV+MY K ++ A++VF M +ISWT++I+G+ + ++ + LF +
Sbjct: 290 CVSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGE 349
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVR 537
ML ++PN +T+ L AC+N + + ++ K H + L+ M+
Sbjct: 350 MLNESIKPNHITYSSILKACAN---ISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAE 406
Query: 538 LGCIEEA 544
GC+EEA
Sbjct: 407 SGCMEEA 413
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 210/411 (51%), Gaps = 27/411 (6%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L L +G + + S++ C S+ +H+ ++ G D V LV++Y K
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302
Query: 123 G---NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV-FLDMLEAGNYPTNVTL 178
M+ A KVF+ + + +V+SWT+LISGYVQ+ E + V F +ML P ++T
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L AC+++ G+Q+HA+V+K +VGN+L S+Y+ G + A + FN++ E
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++++S T E +A R + GI + F S+ S ++ L G Q+
Sbjct: 423 RSMISCIT------EGRDAPLDHRI--GRMDMGISSSTF--ASLISAAASVGMLTKGQQL 472
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H++ +K G+ S+ V NS++ +Y +CG +++A + F+ + N+++W +MI+G
Sbjct: 473 HAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG------- 525
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKT 417
L+ H ALS+F + +G+KP+ T+ ++L+ CS + + +G E ++
Sbjct: 526 ----LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDH 581
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
G + + +V++ + G ++ A EM + + W +++ +H
Sbjct: 582 GLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSH 632
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 151/306 (49%), Gaps = 14/306 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L E K +Y S+L+ C N + +HAH++K+ V LV++Y + G
Sbjct: 350 MLNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGC 409
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV-FLDMLEAGNYPTNVTLGTALT 183
MEEA++VF+ L S+IS + L + +DM ++ T + ++
Sbjct: 410 MEEARRVFNQLYE------RSMISCITEGRDAPLDHRIGRMDM-----GISSSTFASLIS 458
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
A +S+ + G+Q+HA +K D V NSL S+YS CG L A ++FN ++++NV+S
Sbjct: 459 AAASVGMLTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVIS 518
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLG 302
WT++I ++G A + L F M+ G++PN+ T ++ S C + +R G + S+
Sbjct: 519 WTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQ 578
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKD 361
G + ++ L + GLV EA + + M + + W ++ ++
Sbjct: 579 RDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVG 638
Query: 362 DLSAHN 367
+++A N
Sbjct: 639 EIAAKN 644
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 252/745 (33%), Positives = 400/745 (53%), Gaps = 34/745 (4%)
Query: 44 LIQLNGNSEPVRSLGF-QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHA 98
++ N S + GF Q+ L+V E G K + +L C + + L + + IH
Sbjct: 207 VVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHG 266
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL 158
+K G ++ FV LVN+Y C + EAQ VFD +P NV++W SL S YV P+
Sbjct: 267 FALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK 326
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
++VF +M G P + + + L ACS L+ ++ GK IH + VK+ +D V +L +
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVN 386
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
LY+ C + A F+ + +NV++W ++ G +GL F +M+ G++P+ T
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ SI C + L+ G +H ++ G ++ V N+++ LY KC V EAQ +FD +
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506
Query: 339 HVNLVTWNAMIA----------GHAQMMDLAKDDLSAHN-------GGT-------EALS 374
H + +WN ++ G + +D++ A GG EA+
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF K+ + G KPD T SIL CS L G++IH + D+ ALV+MY
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + + VF M + + SW +MI H +AL LFE MLL+ V+P+ TF
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTC 686
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS++ +V E + F M +++ ++P +HY C++D++ R GC+EEA+ FI++M E
Sbjct: 687 VLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME 746
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P + W F+AGCR + N+EL +A++L ++ P +Y L +I V+A W + + ++
Sbjct: 747 PTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIR 806
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
L +E +++T SW + ++V++F D + +S +I+ LDEL K K GYK
Sbjct: 807 KLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTD 866
Query: 675 FELTD---EESAS--VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
+ L D EE A HSEKLA+AFG+LN S I V K+ +C DCHN IK ++++
Sbjct: 867 YVLHDIDQEEKAESLCNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVV 926
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
I+VRDS R H F NG+C+C+DF
Sbjct: 927 GVTIVVRDSLRFHHFKNGNCSCKDF 951
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 282/587 (48%), Gaps = 70/587 (11%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EA+ + T G K ++++ + C + + H + G D +
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ YGKC +E A++VFD+L +VV+W SL + YV P+ ++VF M
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANP 141
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+T+ + L CS L+ ++ GK+IH +VV++ +D V ++ + Y+ C + A F+
Sbjct: 142 LTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDL 201
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++V++W ++ G +GL F +M+ +G++P+ T++ I S C + L+ G
Sbjct: 202 MPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSG 261
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+H +K G N+ V N+++ LY C V EAQ +FD M H N++TWN++ + +
Sbjct: 262 KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV-- 319
Query: 356 MDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
N G + L++F ++ +G+KPD SSIL CS+L L+ G+ IH
Sbjct: 320 -----------NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGF 368
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K G + DV V TALVN+Y C + A VF M R +++W S+ + + N +
Sbjct: 369 AVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKG 428
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHY 528
L +F +M+L GV+P+ VT + L ACS+ +G V M V D +
Sbjct: 429 LNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGM--------VEDVF 480
Query: 529 MC--LIDMFVRLGCIEEA---FDFI-------------------------------KKMD 552
+C L+ ++ + C+ EA FD I + +
Sbjct: 481 VCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDE 540
Query: 553 FEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAML 597
+ +E+ WSV I GC ++ +E + + Q + KP + Y++L
Sbjct: 541 VKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSIL 587
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 195/419 (46%), Gaps = 29/419 (6%)
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
+ + P AI ++ G P AC++ KQ H + D
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDV 75
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN-GEAVQGLRFFSKMLS 269
S+GN+ Y C + A + F+ + ++V++W + + AC N G QGL F KM
Sbjct: 76 SIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNS-LSACYVNCGFPQQGLNVFRKMGL 134
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
++ N T++SI C + L+ G ++H ++ G ++ V ++ + Y KC V E
Sbjct: 135 NKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVRE 194
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPD 387
AQ +FD M H ++VTWN++ + + N G + L++F ++ G+KPD
Sbjct: 195 AQTVFDLMPHRDVVTWNSLSSCYV-------------NCGFPQKGLNVFREMVLDGVKPD 241
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T S IL+ CS L L+ G+ IH LK G + +V V ALVN+Y+ C + A VF
Sbjct: 242 PVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFD 301
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M R +I+W S+ + + N + L +F +M L GV+P+ + L ACS +
Sbjct: 302 LMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKS 361
Query: 508 ALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWS 561
K ++ D ++C L++++ C+ EA FD + N V W+
Sbjct: 362 GKTIHGFAVKHGMVE---DVFVCTALVNLYANCLCVREAQTVFDLMP----HRNVVTWN 413
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/691 (33%), Positives = 377/691 (54%), Gaps = 19/691 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++ S VS L + IH ++ D V T L+ +Y KCG E+A++
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQ 385
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F L ++V+W+++I+ VQ PE A+ +F +M P VTL + L AC+ L
Sbjct: 386 LFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSL 445
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++LGK IH + VK + D S G +L S+Y+ CG +A+ FNR+ +++++W ++I
Sbjct: 446 LKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLING 505
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G+ + F K+ I P+ T+ + C + L G +H L +KLG+ S+
Sbjct: 506 YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESD 565
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
V+N+++ +Y KCG + A+ LF+ + VTWN +IA + Q NG
Sbjct: 566 CHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ------------NGH 613
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+S F ++ P+ TF S+L + L A +G HA ++ GFLS+ +VG +
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 673
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY KCG++ + ++F EM + +SW +M++G+A H +A+ LF M + V+ +
Sbjct: 674 LIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQID 733
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
V+FV L+AC + G+V E F M +Y IKP ++HY C++D+ R G +E FI
Sbjct: 734 SVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFI 793
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K M EP+ +W + CR H N++LG A + L+KL+P++ + +L I+ +GRW
Sbjct: 794 KVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWA 853
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
D ++ + L +T SW+ +K+KV++F+ D HPQ + + + L+EK + G
Sbjct: 854 DAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIG 913
Query: 669 YKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y S E D+E HSE+LAI F LLNTP S I +VK+ +C DCH K
Sbjct: 914 YVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGSTIQIVKNLRVCADCHTTTK 973
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T R IIVRD+ R H F +G C+C D+
Sbjct: 974 FISKITTRRIIVRDATRFHHFEDGICSCNDY 1004
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 261/540 (48%), Gaps = 38/540 (7%)
Query: 59 FQEALSVLTEGPKVQTSSYVS------LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
F + +E P + +S+Y + LL C K L+ IHA I+ +G + +
Sbjct: 11 FTSIATXASEFPSLSSSTYTNYLHYPRLLSSC---KHLNPLLQIHAQIIVSG-FKHHHSI 66
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T L+N+Y + A+ VFD+ P + + W S+I Y ++ Q A+ ++ M+E G
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P T L AC+ +++ G H + + E D +G L +YS G L A +
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+++ +++V++W +I ++ + + + FF M G++P+ +L ++ + ++
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
+ +H + ++S V N ++ LY KCG VD A+++FD M + V+W M+AG+
Sbjct: 247 ELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 353 AQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
AHNG E L +F K+ ++ + + S + + LE+G++IH
Sbjct: 305 ------------AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIH 352
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L+ SD++V T L+ MY KCG E+A ++F + R L++W+++I
Sbjct: 353 GCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPE 412
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-- 529
+AL LF++M ++PN+VT + L AC++ ++ LG + +K MD +
Sbjct: 413 EALSLFQEMQNQKMKPNRVTLMSILPACADLSLL--KLG---KSIHCFTVKADMDSDLST 467
Query: 530 --CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
L+ M+ + G A +M + V W+ I G + G+ + A + KL+
Sbjct: 468 GTALVSMYAKCGFFTAALTTFNRMS-SRDIVTWNSLINGYAQIGD---PYNAIDMFYKLR 523
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 233/691 (33%), Positives = 387/691 (56%), Gaps = 36/691 (5%)
Query: 100 IVKTGSHQDFFVMTF--------------LVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
+++ G+ D + + F LV++Y KC +E+A+ +FD + ++V+WT
Sbjct: 170 LIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTV 229
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+I GY + + ++ +F M E G P V + T + AC+ L ++ + I Y+ + +
Sbjct: 230 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 289
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D +G ++ +Y+ CG + SA + F+R+ EKNV+SW+ +I A G +G+ + L F
Sbjct: 290 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFR 349
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
MLS G+ P++ TL S+ C +L QVH+ G NL V N +++ Y
Sbjct: 350 MMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYR 409
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL--------------AKDD---LSAHNG 368
+D+A LFDGM + V+W+ M+ G A++ D A+ D L
Sbjct: 410 ALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGN 469
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
E+L +F K+ G+ PD +++ C++L A+ + I + F DV++GTA
Sbjct: 470 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 529
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
+++M+ KCG +E A +F M + +ISW++MI + H +AL LF ML +G+ PN
Sbjct: 530 MIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPN 589
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++T V L ACS+AG+V E L +F +M ++Y ++ + HY C++D+ R G ++EA I
Sbjct: 590 KITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLI 649
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M E +E +W F+ CR H ++ L AA LL+L+P++ Y +L +I+ +AGRWE
Sbjct: 650 ESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWE 709
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DVA ++L + +L + W+WI + +K + F D HP+S EI+++L L K + G
Sbjct: 710 DVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVG 769
Query: 669 YKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y +F L D +E + HSEKLAIAFGL+ TP +PI ++K+ +C DCH F K
Sbjct: 770 YVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCK 829
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+++++T R IIVRD+ R H F G C+C D+
Sbjct: 830 LVSAITGRVIIVRDANRFHHFKEGACSCGDY 860
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/531 (25%), Positives = 249/531 (46%), Gaps = 67/531 (12%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++ Y+S L C N L+ +HA G ++ V L+ Y +++A
Sbjct: 78 RLNPKFYISALVNCRN---LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 134
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD + + VSW+ ++ G+ + F +++ G P N TL + AC L++
Sbjct: 135 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 194
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+++ +L +Y C + A F++++E+++++WT +IG
Sbjct: 195 LQM---------------------ALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGG 233
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
E G+A + L F KM EG+ P++ + ++ C + ++ + + + +
Sbjct: 234 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 293
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + +++ +Y KCG V+ A+++FD M N+++W+AMIA + H G
Sbjct: 294 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY-----------HGQGR 342
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+AL +F + SSGM PD T +S+L C L Q Q+HA G L +++V LV
Sbjct: 343 KALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLV 402
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA-----------------------NH 467
+ Y ++ A +F M R +SW+ M+ GFA N+
Sbjct: 403 HFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNY 462
Query: 468 SL-----SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ-KEYKI 521
+L ++++L LF+ M GV P++V V + AC+ G +++A + +Q K++++
Sbjct: 463 TLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQL 522
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++ M IDM + GC+E A + +M+ E N + WS IA HG
Sbjct: 523 DVILGTAM--IDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQ 570
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 197/413 (47%), Gaps = 40/413 (9%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + V+++ C ++ A II +I + D + T ++++Y KCG +E
Sbjct: 253 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 312
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD + NV+SW+++I+ Y + Q A+ +F ML +G P +TL + L AC +
Sbjct: 313 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACIN 372
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ +Q+HA + + V N L YS +L+ A F+ + ++ +SW+ +
Sbjct: 373 CRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVM 432
Query: 248 IGA-------------------CGEN---------GEAVQGLRFFSKMLSEGIQPNEFTL 279
+G CG G A + L F KM EG+ P++ +
Sbjct: 433 VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAM 492
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
++ C + ++ + + + ++ + +++ ++ KCG V+ A+++FD M
Sbjct: 493 VTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE 552
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
N+++W+AMIA + H G +AL +F + SG+ P+ T S+L CS
Sbjct: 553 KNVISWSAMIAAYGY-----------HGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 601
Query: 400 RLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+E+G + +L + +DV T +V++ + GR++ A ++ M+
Sbjct: 602 HAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTV 654
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 145/303 (47%), Gaps = 29/303 (9%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L+ G + SLL C+N ++L+ +HA G Q+ V LV+ Y
Sbjct: 351 MLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRA 410
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQ-----------------NSQPE---------- 157
+++A +FD + + VSW+ ++ G+ + ++P+
Sbjct: 411 LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNA 470
Query: 158 -LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
++ +F M E G P V + T + AC+ L ++ + I Y+ + + + D +G ++
Sbjct: 471 NESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAM 530
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+++ CG + SA + F+R+ EKNV+SW+ +I A G +G+ + L F ML GI PN+
Sbjct: 531 IDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNK 590
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
TL S+ C + G + SL + ++++ ++ L + G +DEA KL +
Sbjct: 591 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIE 650
Query: 336 GMS 338
M+
Sbjct: 651 SMT 653
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 251/768 (32%), Positives = 423/768 (55%), Gaps = 92/768 (11%)
Query: 79 SLLQECVNRKSLS-NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-------------- 123
+LLQ+ VN+ + A+++H ++K+G ++M L+NVY K G
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 124 -----------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+M+ + FD LP+ + VSWT++I GY Q AI V DM
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS- 225
++ G PT TL L + ++ + GK++H+++VK + SV NSL ++Y+ CG
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 226 ------------------------------LNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++ A+ F ++ E+++++W ++I + G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 256 EAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
++ L FSKML + + P+ FTL S+ S C + L +G Q+HS + G+ + V
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 315 NSIMYLYLKCGLVDEAQKLFD--GMSHVNLVTWNAMIAGHAQMMDL--AKD--------D 362
N+++ +Y +CG V+ A++L + G + + + A++ G+ ++ D+ AK+ D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 363 LSA----------HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ A H EA+++F + G +P+ YT +++L++ S L +L G+QIH
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWTSMITGFANHSLSH 471
+K+G + V V AL+ MY K G I ASR F + R +SWTSMI A H +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL+LFE ML+ G+RP+ +T+VG +AC++AG+V + YF+MM+ KI P + HY C+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+F R G ++EA +FI+KM EP+ V W ++ CR H N++LG AAE+LL L+P++
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENS 617
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+Y+ L +++ + G+WE+ A ++ ++ ++ + +SWI +K KV+ F DG HP+
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKN 677
Query: 652 EIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPI 706
EI+ + ++ ++ K GY + L D +E +HSEKLAIAFGL++TP + +
Sbjct: 678 EIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTL 737
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++K+ +C DCH IK I+ L REIIVRD+ R H F +G C+CRD+
Sbjct: 738 RIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 785
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 220/514 (42%), Gaps = 102/514 (19%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQ--------IHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
P ++L T L C++L + K +H V+K + N+L ++YS G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK------------------ 266
A K F+ + + SW TV+ A + G+ FF +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 267 -------------MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
M+ EGI+P +FTLT++ + + G +VHS +KLG N+ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDL--------AKDDL 363
NS++ +Y KCG A+ +FD M ++ +WNAMIA H Q+ MDL A+ D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 364 SAHNG----------GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
N AL IFSK L S + PD +T +S+L+ C+ L L G+QIH+
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASR---------------------------- 444
+ TGF +V AL++MY +CG +E A R
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 445 -----VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+FV + R +++WT+MI G+ H +A+ LF M+ G RPN T L+
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI---EEAFDFIKKMDFEPN 556
S+ + K +I V LI M+ + G I AFD I+ E +
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSV-SVSNALITMYAKAGNITSASRAFDLIR---CERD 479
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKP 588
V W+ I +HG+ E E +L L+P
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 228/521 (43%), Gaps = 95/521 (18%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + + ++L + + + +H+ IVK G + V L+N+Y KCG+
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 125 -------------------------------MEEAQKVFDNLPRINVVSWTSLISGYVQN 153
M+ A F+ + ++V+W S+ISG+ Q
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 154 SQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
A+ +F ML ++ P TL + L+AC++LE + +GKQIH+++V + V
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 213 GNSLCSLYSTC---------------------------------GSLNSAIKAFNRIREK 239
N+L S+YS C G +N A F ++++
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+V++WT +I ++G + + F M+ G +PN +TL ++ SV ++ SL G Q+H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDL 358
+K G ++ V N+++ +Y K G + A + FD + + V+W +MI AQ
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ---- 492
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
H EAL +F + G++PD T+ + + C+ + QG Q +
Sbjct: 493 -------HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV- 544
Query: 419 FLSDVVVGT-----ALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQ 472
D ++ T +V+++ + G ++ A +M +++W S+++ H
Sbjct: 545 ---DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
E +LL + P GA +A +N +Y A G +E
Sbjct: 602 GKVAAERLLL--LEPEN---SGAYSALAN---LYSACGKWE 634
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 255/716 (35%), Positives = 399/716 (55%), Gaps = 44/716 (6%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
N ++P S F AL VL E E V + L +H +VK G +
Sbjct: 187 NEGTQP-NSFTFAAALGVLAE--------------EGVGGRGLQ----VHTVVVKNGLDK 227
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
V L+N+Y KCGN+ +A+ +FD +VV+W S+ISGY N A+ +F M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ + + + C++L+ +R +Q+H VVKY D ++ +L YS C ++
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 228 SAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A++ F I NV+SWT +I +N + + FS+M +G++PNEFT SV
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY----SVI 403
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
T L + ++VH+ +K Y + V +++ Y+K G V+EA K+F G+ ++V W+
Sbjct: 404 LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVA-L 404
AM+AG+AQ G TEA + +F +L G+KP+ +TFSSIL +C+ A +
Sbjct: 464 AMLAGYAQ------------TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
QG+Q H +K+ S + V +AL+ MY K G IE A VF + L+SW SMI+G+
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H + +AL +F++M V+ + VTF+G AAC++AG+V E YF++M ++ KI P
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+H C++D++ R G +E+A I+ M IW +A CR H ELG AAE+++
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+KP+D +Y +L +++ +G W++ A V+ L E + + +SWI +K+K YSF D
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
HP +I+ L++L + K GY+ S+ L D +E+ HSE+LAIAFGL+
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF-VNGHCTCRDF 754
TP SP+L++K+ +C DCH IK+I + REI+VRDS R H F +G C+C DF
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 259/501 (51%), Gaps = 29/501 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G D V T LV+ Y K N ++ +KVFD + NVV+WT+LISGY +NS
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ + +F+ M G P + T AL + G Q+H VVK + V NS
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +LY CG++ A F++ K+V++W ++I NG ++ L F M ++ +
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E + S+ +C + LR Q+H +K G+ + +R ++M Y KC + +A +LF
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 336 GMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ V N+V+W AMI+G Q ++G EA+ +FS++ G++P+ +T+S I
Sbjct: 355 EIGCVGNVVSWTAMISGFLQ-----------NDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
LT + E +HA +KT + VGTAL++ Y K G++E A++VF + + +
Sbjct: 404 LTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--SNAGMVYEALGYF 512
++W++M+ G+A + A+++F ++ G++PN+ TF L C +NA M G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-----GQG 514
Query: 513 EMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+ + IK +D +C L+ M+ + G IE A + K+ E + V W+ I+G
Sbjct: 515 KQFHG-FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYA 572
Query: 569 RHGNMELGFYAAEQLLKLKPK 589
+HG +++ K K K
Sbjct: 573 QHGQAMKALDVFKEMKKRKVK 593
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 238/466 (51%), Gaps = 20/466 (4%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +FD P + S+ SL+ G+ ++ + + A +FL++ G + L ++
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L G+Q+H +K+ DD SVG SL Y + K F+ ++E+NV++WTT+
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I N + L F +M +EG QPN FT + V G QVH++ +K G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V NS++ LYLKCG V +A+ LFD ++VTWN+MI+G+A A+
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-----------ANG 274
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F + + ++ +F+S++ +C+ L L EQ+H +K GFL D + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+ Y KC + A R+F E+ ++SWT+MI+GF + +A+ LF +M GVR
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+ T+ L A ++ + + ++++ Y+ + L+D +V+LG +EEA
Sbjct: 395 PNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAK 449
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
+D + + V WS +AG + G E +L K +KP +
Sbjct: 450 VFSGID-DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 197/423 (46%), Gaps = 50/423 (11%)
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L +A F++ ++ S+ +++ +G + R F + G++ + +S+ V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
T+ G Q+H IK G+ ++ V S++ Y+K + +K+FD M N+VTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+I+G+A+ ++ E L++F ++ + G +P+ +TF++ L + +
Sbjct: 163 TTLISGYAR-----------NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+G Q+H + +K G + V +L+N+Y KCG + +A +F + +++++W SMI+G+A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY-------EALGYFEMMQKE 518
+ L +AL +F M L VR ++ +F + C+N + + Y + +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 519 YKIKPVMDHYMC--LID---MFVRLGCI-------------------EEAFDF---IKKM 551
+ ++ + C ++D +F +GC+ EEA D +K+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM-LLDIFVSAGRWEDV 610
PNE +SV + E+ Q++K + + LLD +V G+ E+
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 611 AVV 613
A V
Sbjct: 448 AKV 450
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 454 bits (1167), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/696 (34%), Positives = 383/696 (55%), Gaps = 18/696 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + +++S+L C + L+ + +HA +V G DF + T LV++Y K G+
Sbjct: 149 MVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGS 208
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
M++A++VFD L +V ++ ++ GY ++ E A +F M + G P ++ + L
Sbjct: 209 MDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDG 268
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C + E++ GK +HA + DD V SL +Y+TCGS+ A + F+ ++ ++V+SW
Sbjct: 269 CWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSW 328
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T +I ENG F+ M EGIQP+ T I + C +L ++HS
Sbjct: 329 TVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDI 388
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G+ ++L V +++++Y KCG + +A+++FD M ++V+W+AMI + +
Sbjct: 389 AGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVE---------- 438
Query: 365 AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
NG GTEA F + S ++PD T+ ++L C L AL+ G +I+ +K +S V
Sbjct: 439 --NGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHV 496
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+G AL+ M K G +ERA +F M R +I+W +MI G++ H + +AL LF+ ML
Sbjct: 497 PLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKE 556
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
RPN VTFVG L+ACS AG V E +F + + I P + Y C++D+ R G ++E
Sbjct: 557 RFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDE 616
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A IK M +P IWS + CR HGN+++ AAE+ L + P D Y L ++ +
Sbjct: 617 AELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAA 676
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG WE+VA V+ + + + +WI + KV++F D HP EI+ L L+
Sbjct: 677 AGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNA 736
Query: 664 AKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GY L D +E A YHSEKLAIA+G+L+ P +PI + K+ +C DC
Sbjct: 737 IKREGYIPITQNVLHDVGEQQKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDC 796
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H+ K I+ +T REII RD+ R H F +G C+C D+
Sbjct: 797 HSASKFISKVTGREIIARDASRFHHFKDGVCSCGDY 832
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 278/538 (51%), Gaps = 26/538 (4%)
Query: 55 RSLGFQEALSVLTEGPK-VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
R +G + L L EG + + +YV L Q C + + + + HI++ G + + +
Sbjct: 37 RRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELN 96
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+ +Y CGN+ EA+++FD++ VV+W +LI+GY Q + A +F M++ G P
Sbjct: 97 TLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEP 156
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ +T + L ACSS + GK++HA VV D +G +L S+Y GS++ A + F
Sbjct: 157 SIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVF 216
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + ++V ++ ++G ++G+ + F +M G++PN+ + SI C T +L
Sbjct: 217 DGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALA 276
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G VH+ + G ++RV S++ +Y CG ++ A+++FD M ++V+W MI G+A
Sbjct: 277 WGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYA 336
Query: 354 QMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ NG E A +F+ + G++PD T+ I+ C+ L +IH+
Sbjct: 337 E------------NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHS 384
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
GF +D++V TALV+MY KCG I+ A +VF M R ++SW++MI + + +
Sbjct: 385 QVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTE 444
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK--PVMDHYMC 530
A + F M + + P+ VT++ L AC + G + + + K + P+ +
Sbjct: 445 AFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGN---A 501
Query: 531 LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
LI M + G +E A FD + + D + W+ I G HGN Y +++LK
Sbjct: 502 LIIMNAKHGSVERARYIFDTMVRRDV----ITWNAMIGGYSLHGNAREALYLFDRMLK 555
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/735 (33%), Positives = 403/735 (54%), Gaps = 56/735 (7%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + G K + S+L + +H H+V+ + D + + LV++Y KC
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC 425
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTA 181
G +EEA +VF +L N VS+ +L++GYVQ + E A+ ++ DM E G P T T
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTL 485
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
LT C++ + G+QIHA++++ + V L +YS CG LN A + FNR+ E+N
Sbjct: 486 LTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNA 545
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW ++I +NGE + LR F +M GI+P+ F+L+S+ S C ++ + G ++H+
Sbjct: 546 YSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 605
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVD-------------------------------EA 330
++ ++ ++ +Y KCG +D +A
Sbjct: 606 IVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDA 665
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDL 388
+ LFD M N WN+++AG+A N G E+ + F ++ S ++ D+
Sbjct: 666 KNLFDQMEQRNTALWNSILAGYA-------------NKGLKKESFNHFLEMLESDIEYDV 712
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFV 447
T +I+ +CS L ALE G+Q+H+L +K GF++ VV+ TALV+MY KCG I +A VF
Sbjct: 713 LTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFD 772
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M+ + ++SW +MI+G++ H S +AL L+E+M G+ PN+VTF+ L+ACS+ G+V E
Sbjct: 773 NMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEE 832
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L F MQ++Y I+ +HY C++D+ R G +E+A +F++KM EP W + C
Sbjct: 833 GLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGAC 892
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H +M++G AA++L +L P++ Y ++ +I+ +AGRW++V ++ + + + + +
Sbjct: 893 RVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPG 952
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS--- 684
SWI I ++ F HP++ EI+ L L ++K GY SF L + +
Sbjct: 953 VSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEE 1012
Query: 685 -----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
+ HSE+LA++ GL++ P S I V K+ +C DCH K I+ +T R II RD+
Sbjct: 1013 EEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTN 1072
Query: 740 RLHKFVNGHCTCRDF 754
R H F NG C+C D+
Sbjct: 1073 RFHHFENGKCSCGDY 1087
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 264/502 (52%), Gaps = 26/502 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+++ C+ + + + + +VK G + + FV LV+ Y + G M++A D +
Sbjct: 177 TFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEI 236
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VV+W ++I+GYV+ E A +F ML+ G P N T +AL C +L S GK
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGK 296
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H+ ++ + DT VGN+L +Y+ C S +K F+ + E+N ++W ++I A + G
Sbjct: 297 QVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFG 356
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
L F +M G + N F L SI + + G ++H ++ S++ + +
Sbjct: 357 HFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGS 416
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG+V+EA ++F + N V++NA++AG+ Q EAL +
Sbjct: 417 ALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQ-----------EGKAEEALEL 465
Query: 376 FSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ + S G++PD +TF+++LT+C+ QG QIHA ++ +++V T LV+MY
Sbjct: 466 YHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYS 525
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
+CGR+ A +F M+ R SW SMI G+ + + +AL+LF+ M L G++P+ +
Sbjct: 526 ECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSS 585
Query: 495 ALAAC-----SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FD 546
L++C S G M++E ++ V L+DM+ + G ++ A +D
Sbjct: 586 MLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVV------LVDMYAKCGSMDYAWKVYD 639
Query: 547 FIKKMDFEPNEVIWSVFIAGCR 568
K D N V+ S F+ R
Sbjct: 640 QTIKKDVILNNVMVSAFVNSGR 661
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 277/562 (49%), Gaps = 25/562 (4%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---A 128
V Y SL+Q+C++ S + IH ++ G + D ++MT ++ +Y + G +++ A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+K+F+ +P N+ +W ++I Y + + ++ M +GN+ T + + AC ++
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
E + +Q+ + VVK + VG +L Y+ G ++ A+ + + I +V++W VI
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVI 248
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ + F +ML G+ P+ FT S VCG + S G QVHS I G+
Sbjct: 249 AGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFK 308
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V N+++ +Y KC + K+FD M N VTWN++I+ AQ
Sbjct: 309 GDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF---------- 358
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL +F ++ SG K + + SIL + L + +G ++H ++ SD+++G+A
Sbjct: 359 -NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRP 487
LV+MY KCG +E A +VF + R +S+ +++ G+ + +AL+L+ DM G++P
Sbjct: 418 LVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQP 477
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+Q TF L C+N + + + K ++ L+ M+ G + A +
Sbjct: 478 DQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE-LVHMYSECGRLNYAKEI 536
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVS-- 603
+M E N W+ I G +++G + L + QL +KP DC S + +L VS
Sbjct: 537 FNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP-DCFSLSSMLSSCVSLS 594
Query: 604 ---AGRWEDVAVVKNLTREEKL 622
GR +V+N EE +
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGI 616
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 99/196 (50%), Gaps = 3/196 (1%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVN 117
F L +L + + V+++ C + +L + + +H+ I+K G V+ T LV+
Sbjct: 697 FNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVD 756
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG + +A+ VFDN+ N+VSW ++ISGY ++ + A+ ++ +M + G YP VT
Sbjct: 757 MYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVT 816
Query: 178 LGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
L+ACS + G +I + + Y E + L G L A + ++
Sbjct: 817 FLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKM 876
Query: 237 R-EKNVMSWTTVIGAC 251
E V +W ++GAC
Sbjct: 877 PIEPEVSTWGALLGAC 892
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/680 (33%), Positives = 380/680 (55%), Gaps = 16/680 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
++L+ C N SL +++HA +++G D F+ LV++Y KCG + +A KVF +
Sbjct: 56 TVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNP 115
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VV+W+++I+G Q + A +F M G P TL + ++ +++ +R G+ IH
Sbjct: 116 DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIH 175
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ KY E D V N L +Y + K F + +++SW ++ ++
Sbjct: 176 GCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCG 235
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+G R F +ML EG +PN FT S+ C ++L G QVH+ IK + V +++
Sbjct: 236 RGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALV 295
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K +++A FD + + ++ +W +I+G+AQ + +A+ F +
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQT-----------DQAEKAVKYFRQ 344
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+KP+ YT +S L+ CS + LE G Q+HA+ +K G D+ VG+ALV++Y KCG
Sbjct: 345 MQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGC 404
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+E A +F + +R ++SW ++I+G++ H +AL+ F ML G+ P++ TF+G L+A
Sbjct: 405 MEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSA 464
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS G+V E F+ M K Y I P ++HY C++D+ R G E FI++M+ P +
Sbjct: 465 CSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSL 524
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW + C+ HGN++ G AA++L +++P SY +L +IF S GRW+DV ++ L
Sbjct: 525 IWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMT 584
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + SW+ + +V+ F DG HP+ EI+ LD+L + GY + L
Sbjct: 585 SRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLH 644
Query: 679 DEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
+ + YHSE+LA++F LL+T V PI + K+ +C DCH+F+K+I+ +T +EI
Sbjct: 645 NVSNKEKMEHLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEI 704
Query: 734 IVRDSKRLHKFVNGHCTCRD 753
+VRD +R H F G C+C+D
Sbjct: 705 VVRDIRRFHHFKRGTCSCQD 724
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 240/466 (51%), Gaps = 25/466 (5%)
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
ME A+++F +P N VSW +L++GY Q + + +F M E + TL T L
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C++ S+R GK +HA ++ E D +G SL +YS CG++ A+K F +IR +V++W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I + G + F M +G +PN+FTL+S+ S M LR G +H K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G+ S+ V N ++ +Y+K V++ K+F+ M++ +LV+WNA+++G +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR---- 236
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
IF ++ G KP+++TF S+L CS L+ E G+Q+HA +K D
Sbjct: 237 -------GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDF 289
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VGTALV+MY K +E A F + R + SWT +I+G+A + +A++ F M G
Sbjct: 290 VGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREG 349
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY------MCLIDMFVRL 538
++PN+ T L+ CS+ + E ++ + + H+ L+D++ +
Sbjct: 350 IKPNEYTLASCLSGCSH-------MATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKC 402
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
GC+E A K + + V W+ I+G +HG E A +L
Sbjct: 403 GCMEHAEAIFKGL-ISRDIVSWNTIISGYSQHGQGEKALEAFRMML 447
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 204/382 (53%), Gaps = 13/382 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + + SL+ N L + IH I K G D V L+ +Y K +E+
Sbjct: 146 KGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVED 205
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
KVF+ + ++VSW +L+SG+ + +F ML G P T + L +CSS
Sbjct: 206 GNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSS 265
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L GKQ+HA+++K ++DD VG +L +Y+ L A AF+R+ +++ SWT +
Sbjct: 266 LLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVI 325
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + +A + +++F +M EGI+PNE+TL S S C M +L G Q+H++ +K G+
Sbjct: 326 ISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGH 385
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ V ++++ LY KCG ++ A+ +F G+ ++V+WN +I+G++Q H
Sbjct: 386 FGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQ-----------HG 434
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVG 426
G +AL F + S G+ PD TF +L+ CS + +E+G++ +++ G +
Sbjct: 435 QGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHY 494
Query: 427 TALVNMYKKCGRIERASRVFVE 448
+V++ + G+ ++F+E
Sbjct: 495 ACMVDILGRAGKFNEV-KIFIE 515
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 175/390 (44%), Gaps = 45/390 (11%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG K +++S+L+ C + + +HAHI+K S D FV T LV++Y K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A FD L ++ SWT +ISGY Q Q E A+ F M G P TL + L+
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS + ++ G+Q+HA VK D VG++L LY CG + A F + ++++SW
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T+I ++G+ + L F MLSEGI P+E T + S C M
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFM--------------- 468
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
GLV+E +K FD MS + + N I +A M+D+
Sbjct: 469 --------------------GLVEEGKKRFDSMSKIYGI--NPSIEHYACMVDIL----- 501
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
G + IF + + P + ++L C ++ GE+ + + D
Sbjct: 502 GRAGKFNEVKIF--IEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSS 559
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L N++ GR + + M++R +
Sbjct: 560 Y-ILLSNIFASKGRWDDVRNIRALMTSRGI 588
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 244/706 (34%), Positives = 387/706 (54%), Gaps = 23/706 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
QEA S+ + G ++Y+S+L + +L +++H H + G D +
Sbjct: 403 QEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGN 462
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+++Y KCG++++A+ VFD + +V+SW +++ G QN A VFL M + G P
Sbjct: 463 ALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVP 522
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ T + L S +++ ++H + V+ D VG++ +Y CGS++ A F
Sbjct: 523 DSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLF 582
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+++ ++V +W +IG + + L F +M EG P+ T +I S +L
Sbjct: 583 DKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALE 642
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+VHS G +LRV N++++ Y KCG V A+++FD M N+ TW MI G A
Sbjct: 643 WVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLA 701
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q H G +A S F ++ G+ PD T+ SIL+ C+ ALE +++H
Sbjct: 702 Q-----------HGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNH 750
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ G +SD+ VG ALV+MY KCG I+ A VF +M R + SWT MI G A H +A
Sbjct: 751 AVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEA 810
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L F M G +PN ++V L ACS+AG+V E F M ++Y I+P M+HY C++D
Sbjct: 811 LDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVD 870
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +EEA FI M EP++ W + C +GN+E+ +AA++ LKLKPK +
Sbjct: 871 LLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSAST 930
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +L +I+ + G+WE +V+++ + + + + SWI + ++++SF D HP+S EI
Sbjct: 931 YVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEI 990
Query: 654 FKVLDELVEKAKCFGYKQQESFEL--TDE---ESASVYHSEKLAIAFGLLNTPIVSPILV 708
+ L++L+E+ K GY L TD+ E A HSEKLAI +GL++T PI V
Sbjct: 991 YAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRV 1050
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K I+ +T REI+ RD+KR H F +G C+C D+
Sbjct: 1051 YKNLRVCSDCHTATKFISKITGREIVARDAKRFHHFKDGVCSCGDY 1096
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 279/530 (52%), Gaps = 23/530 (4%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+ +G + + SYV++LQ C+ ++ + A+ +H I+K+G Q+ +V L+ VY +CG +
Sbjct: 110 VQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRL 169
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+ A++VFD L + N+ WT++I GY + E A+ V+ M + P +T + L AC
Sbjct: 170 QCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC 229
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+++ GK+IHA++++ + D V +L ++Y CGS+ A F+++ E+NV+SWT
Sbjct: 230 CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWT 289
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+IG G + F +M EG PN +T SI + + +L +VHS +
Sbjct: 290 VMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA 349
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G A +LRV N+++++Y K G +D+A+ +FDGM+ ++ +W MI G AQ
Sbjct: 350 GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQ----------- 398
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSIL--TICSRLVALEQGEQIHALTLKTGFLSDV 423
H G EA S+F ++ +G P+L T+ SIL + + ALE + +H + GF+SD+
Sbjct: 399 HGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDL 458
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+G AL++MY KCG I+ A VF M R +ISW +M+ G A + H+A +F M
Sbjct: 459 RIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQE 518
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGC 540
G+ P+ T++ L N +AL + + K ++ + I M++R G
Sbjct: 519 GLVPDSTTYLSLL----NTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGS 574
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGC--RRHGNMELGFYAAEQLLKLKP 588
I++A K+ + W+ I G +R G L + Q P
Sbjct: 575 IDDARLLFDKLSVR-HVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIP 623
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 280/548 (51%), Gaps = 49/548 (8%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F L + EG + +YVS+L + +L + +H+H V G D V LV++
Sbjct: 305 FHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHM 364
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K G++++A+ VFD + ++ SWT +I G Q+ + + A +FL M G P T
Sbjct: 365 YAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTY 424
Query: 179 -----GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+A+ + S+LE +++ +H + + D +GN+L +Y+ CGS++ A F
Sbjct: 425 LSILNASAIASTSALEWVKV---VHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVF 481
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + +++V+SW ++G +NG + F +M EG+ P+ T S+ + G+ +L
Sbjct: 482 DGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALE 541
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+VH ++ G S+ RV ++ +++Y++CG +D+A+ LFD +S ++ TWNAMI G A
Sbjct: 542 WVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAA 601
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q G EALS+F ++ G PD TF +IL+ ALE +++H+
Sbjct: 602 Q-----------QRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSH 650
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
G L D+ VG ALV+ Y KCG ++ A +VF +M R + +WT MI G A H H A
Sbjct: 651 ATDAG-LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDA 709
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---- 529
F ML G+ P+ T+V L+AC++ G AL + +K V +H +
Sbjct: 710 FSHFLQMLREGIVPDATTYVSILSACASTG----ALEW---------VKEVHNHAVSAGL 756
Query: 530 --------CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
L+ M+ + G I++A M E + W+V I G +HG G A +
Sbjct: 757 VSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQHGR---GLEALD 812
Query: 582 QLLKLKPK 589
+K+K +
Sbjct: 813 FFVKMKSE 820
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 204/392 (52%), Gaps = 13/392 (3%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F L + EG +++Y+SLL + +L +H H V+TG DF V + +++
Sbjct: 509 FTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHM 568
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y +CG++++A+ +FD L +V +W ++I G Q A+ +FL M G P T
Sbjct: 569 YIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTF 628
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L+A E++ K++H++ D VGN+L YS CG++ A + F+ + E
Sbjct: 629 INILSANVDEEALEWVKEVHSHATDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDMVE 687
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+NV +WT +IG ++G F +ML EGI P+ T SI S C + +L +V
Sbjct: 688 RNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEV 747
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+ + G S+LRV N+++++Y KCG +D+A+ +FD M ++ +W MI G AQ
Sbjct: 748 HNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQ---- 803
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKT 417
H G EAL F K+ S G KP+ Y++ ++LT CS +++G Q ++T
Sbjct: 804 -------HGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDY 856
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
G + T +V++ + G +E A + M
Sbjct: 857 GIEPTMEHYTCMVDLLGRAGLLEEAELFILNM 888
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 154/324 (47%), Gaps = 23/324 (7%)
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCG-LVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
AQV + + S ++R+S +Y G E K + LV NA + G A+
Sbjct: 36 AQVQRILVGSTLLSGRQMRHSRLYFLSISGCFKSEKHKYLPSV----LVCANASVDGAAE 91
Query: 355 MMDLAKDDLSAHN--GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
HN +A+++ G+ D +++ +IL C + + +Q+H
Sbjct: 92 ---------QTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHV 142
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+K+G ++ V L+ +Y +CGR++ A +VF ++ + + WT+MI G+A + +
Sbjct: 143 CIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAED 202
Query: 473 ALQLFEDMLLAGVRPNQVTFVGAL-AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
A+++++ M +PN++T++ L A C + + + ++Q ++ ++ L
Sbjct: 203 AMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE--TAL 260
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPK 589
++M+V+ G IE+A KM E N + W+V I G +G + F+ Q+ + P
Sbjct: 261 VNMYVKCGSIEDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIP- 318
Query: 590 DCESYAMLLDIFVSAGRWEDVAVV 613
+ +Y +L+ SAG E V V
Sbjct: 319 NSYTYVSILNANASAGALEWVKEV 342
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F L +L EG ++YVS+L C + +L + +H H V G D V LV++
Sbjct: 710 FSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHM 769
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG++++A+ VFD++ +V SWT +I G Q+ + A+ F+ M G P +
Sbjct: 770 YAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSY 829
Query: 179 GTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA-IKAFNRI 236
LTACS + G +Q + Y E + L G L A + N
Sbjct: 830 VAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMP 889
Query: 237 REKNVMSWTTVIGAC 251
E + W ++GAC
Sbjct: 890 IEPDDAPWGALLGAC 904
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/667 (35%), Positives = 384/667 (57%), Gaps = 24/667 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HA +VK G + V L+++Y + G + +A+ VFD + + V+W S+I+GYV+N Q
Sbjct: 216 VHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQ 275
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+F M AG PT++T + + +C+SL + L K + +K D V +
Sbjct: 276 DLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITA 335
Query: 216 LCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L S C ++ A+ F+ + E KNV+SWT +I C +NG Q + FS+M EG++P
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKP 395
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N FT ++I +V + +++H+ IK Y + V +++ Y+K G +A K+F
Sbjct: 396 NHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF 451
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
+ + +L+ W+AM+AG+AQ G TE A +F +L G+KP+ +TFSS
Sbjct: 452 EIIEAKDLMAWSAMLAGYAQ------------TGETEEAAKLFHQLIKEGIKPNEFTFSS 499
Query: 394 ILTIC-SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++ C S A EQG+Q HA +K + + V +ALV MY K G I+ A VF R
Sbjct: 500 VINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKER 559
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L+SW SMI+G++ H + +AL++F++M + + VTF+G + AC++AG+V + YF
Sbjct: 560 DLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYF 619
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M ++ I P M HY C+ID++ R G +E+A I +M F P +W + R H N
Sbjct: 620 NSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRN 679
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+ELG AAE+L+ L+P+D +Y +L +++ +AG W++ V+ L + K+ + +SWI
Sbjct: 680 VELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIE 739
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASV--YH 687
+K+K YSF D HP S +I+ L EL + K GY+ ++ DE+ ++ +H
Sbjct: 740 VKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHH 799
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LAIAFGL+ TP PI +VK+ +C DCHNF K+++ + R I+VRDS R H F +G
Sbjct: 800 SERLAIAFGLIATPPEIPIQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDG 859
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 860 LCSCGDY 866
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 255/496 (51%), Gaps = 27/496 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H VK G V T LV++Y K N+ + ++VFD + NVVSWTSL++GY N
Sbjct: 115 VHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGL 174
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+F M G P T+ T + A + + +G Q+HA VVK+ E+ V NS
Sbjct: 175 YGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNS 234
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L SLYS G L A F+++ ++ ++W ++I NG+ ++ F+KM G++P
Sbjct: 235 LISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPT 294
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T S+ C ++ L + + +K G+ ++ V ++M KC +D+A LF
Sbjct: 295 HMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFS 354
Query: 336 GMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSS 393
M N+V+W AMI+G Q NGG +A+++FS++ G+KP+ +T+S+
Sbjct: 355 LMEEGKNVVSWTAMISGCLQ------------NGGNDQAVNLFSQMRREGVKPNHFTYSA 402
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
ILT+ + E +HA +KT + VGTAL++ Y K G A +VF + +
Sbjct: 403 ILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKD 458
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L++W++M+ G+A + +A +LF ++ G++PN+ TF + AC++ E F
Sbjct: 459 LMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFH 518
Query: 514 MMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
Y IK +++ +C L+ M+ + G I+ A + K+ E + V W+ I+G +
Sbjct: 519 ----AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQK-ERDLVSWNSMISGYSQ 573
Query: 570 HGNMELGFYAAEQLLK 585
HG + +++ K
Sbjct: 574 HGQAKKALEVFDEMQK 589
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 240/472 (50%), Gaps = 30/472 (6%)
Query: 128 AQKVFDNLPR--INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A +FD +P + L+ Y ++ Q + A+++F+ +L + P TL C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ +LG+Q+H VK+ D SVG SL +Y ++N + F+ + E+NV+SWT
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+++ NG F +M EG+ PN +T++++ + + +G QVH++ +K
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G+ + V NS++ LY + G++ +A+ +FD M + VTWN+MIAG+ +
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVR----------- 272
Query: 366 HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG E IF+K+ +G+KP TF+S++ C+ L L + + LK+GF +D +
Sbjct: 273 -NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQI 331
Query: 425 VGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V TAL+ KC ++ A +F M + ++SWT+MI+G + + QA+ LF M
Sbjct: 332 VITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRRE 391
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GV+PN T+ L V+ + + E+++ Y+ + L+D +V+LG +
Sbjct: 392 GVKPNHFTYSAILTVHYP---VFVSEMHAEVIKTNYERSSSVG--TALLDAYVKLGNTID 446
Query: 544 A---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
A F+ I+ D + WS +AG + G E QL+K +KP +
Sbjct: 447 AVKVFEIIEAKDL----MAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNE 494
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/384 (27%), Positives = 199/384 (51%), Gaps = 18/384 (4%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++ S+++ C + + L+ +++ +K+G D V+T L+ KC M++A
Sbjct: 290 GVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDA 349
Query: 129 QKVFDNLPR-INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+F + NVVSWT++ISG +QN + A+++F M G P + T LT
Sbjct: 350 LSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYP 409
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++HA V+K E +SVG +L Y G+ A+K F I K++M+W+ +
Sbjct: 410 V----FVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAM 465
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT-MLSLRVGAQVHSLGIKLG 306
+ + GE + + F +++ EGI+PNEFT +S+ + C + + G Q H+ IK+
Sbjct: 466 LAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMR 525
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ L V ++++ +Y K G +D A ++F +LV+WN+MI+G++Q H
Sbjct: 526 LNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQ-----------H 574
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
+AL +F ++ M D TF ++T C+ +E+G++ + ++ +
Sbjct: 575 GQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKH 634
Query: 427 -TALVNMYKKCGRIERASRVFVEM 449
+ ++++Y + G +E+A + EM
Sbjct: 635 YSCMIDLYSRAGMLEKAMGIINEM 658
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/682 (35%), Positives = 381/682 (55%), Gaps = 20/682 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+LLQ N KSL+ A +HAH+ G+ ++ ++ T L Y CG+M AQ +FD +
Sbjct: 27 TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N W S+I GY N+ P A+ ++L ML G P N T L AC L +G+++
Sbjct: 87 KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA VV E+D VGNS+ S+Y G + +A F+R+ +++ SW T++ +NGEA
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS---NLRVR 314
F M +G + TL ++ S CG ++ L+VG ++H ++ G + N +
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLM 266
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NSI+ +Y C V A+KLF+G+ ++V+WN++I+G+ + D +AL
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGD-----------AFQALE 315
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ G PD T S+L C+++ AL G + + +K G++ +VVVGTAL+ MY
Sbjct: 316 LFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYA 375
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
CG + A RVF EM + L + T M+TGF H +A+ +F +ML GV P++ F
Sbjct: 376 NCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTA 435
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS++G+V E F M ++Y ++P HY CL+D+ R G ++EA+ I+ M +
Sbjct: 436 VLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLK 495
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PNE +W+ ++ CR H N++L +A++L +L P Y L +I+ + RWEDV V+
Sbjct: 496 PNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVR 555
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
L + +L + +S++ + V+ F D H QS +I+ L +L E+ K GYK S
Sbjct: 556 ALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTS 615
Query: 675 FELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L D +E HSE+LA+AF L+NT + I + K+ +C DCH IK+I+ LT
Sbjct: 616 LVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMISKLT 675
Query: 730 AREIIVRDSKRLHKFVNGHCTC 751
REII+RD R H F +G C+C
Sbjct: 676 NREIIMRDICRFHHFRDGLCSC 697
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 214/423 (50%), Gaps = 18/423 (4%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N+ P R+L L +L G K +Y +L+ C + +HA +V G +D
Sbjct: 102 NNSPSRALFLY--LKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDV 159
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V ++++Y K G++E A+ VFD + ++ SW +++SG+V+N + A VF DM
Sbjct: 160 YVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRD 219
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG---NSLCSLYSTCGSL 226
G TL L+AC + +++GK+IH YVV+ G NS+ +Y C S+
Sbjct: 220 GFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESV 279
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ A K F +R K+V+SW ++I + G+A Q L F +M+ G P+E T+ S+ + C
Sbjct: 280 SCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAAC 339
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ +LR+GA V S +K GY N+ V +++ +Y CG + A ++FD M NL
Sbjct: 340 NQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACT 399
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
M+ G H G EA+SIF ++ G+ PD F+++L+ CS +++
Sbjct: 400 VMVTG-----------FGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDE 448
Query: 407 GEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGF 464
G++I + +T + LV++ + G ++ A V M + WT++++
Sbjct: 449 GKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSAC 508
Query: 465 ANH 467
H
Sbjct: 509 RLH 511
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 379/657 (57%), Gaps = 27/657 (4%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K ++ A ++F+++P +VVSW ++S Q+ + A+ V +DM G + T
Sbjct: 238 YAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTY 297
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
++LTAC+ L S+ GKQ+HA V++ D V +++ LY+ CG A + F+ +R+
Sbjct: 298 TSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRD 357
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N +SWT +IG + G + L F++M +E + ++F L +I S C + + + Q+
Sbjct: 358 RNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQL 417
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HSL +K G+ + + NS++ +Y KCG + A+ +F M ++V+W M+ ++Q+ ++
Sbjct: 418 HSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNI 477
Query: 359 AK-----DDLSA---------------HNGGTEALSIFSK-LNSSGMKPDLYTFSSILTI 397
K D +S H + L ++S L + PD T+ ++
Sbjct: 478 GKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRG 537
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ + A + G+QI T+K G + D V A++ MY KCGRI A ++F +S + L+SW
Sbjct: 538 CADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSW 597
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+MITG++ H + QA+++F+DML G +P+ +++V L++CS++G+V E YF+M+++
Sbjct: 598 NAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKR 657
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
++ + P ++H+ C++D+ R G + EA + I +M +P +W ++ C+ HGN EL
Sbjct: 658 DHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAE 717
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AA+ L L D Y +L I+ AG+ D A V+ L R++ + + +SW+ +K+KV
Sbjct: 718 LAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKV 777
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGL 697
+ FK D HPQ I + LDEL+EK GY + ES + ++HSEKLA+AFG+
Sbjct: 778 HVFKAEDVSHPQVIAIREKLDELMEKIAQLGYVRTESLR------SEIHHSEKLAVAFGI 831
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+N P PI ++K+ +C DCH IK+I+++T RE ++RD+ R H F G C+C D+
Sbjct: 832 MNLPAWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDY 888
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 257/554 (46%), Gaps = 88/554 (15%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN-YP 173
++N Y K G++ +A+++F +PR +V SW +L+SGY Q+ + A+ F+ M +G+ P
Sbjct: 101 MMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLP 160
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T G A+ +C +L + Q+ + K+ + D V + ++ CG+++ A K F
Sbjct: 161 NAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQF 220
Query: 234 NRIR-------------------------------EKNVMSWTTVIGACGENGEAVQGLR 262
++I E++V+SW ++ A ++G A + L
Sbjct: 221 SQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALS 280
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
M + G++ + T TS + C + SL G Q+H+ I+ + V ++++ LY
Sbjct: 281 VAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYA 340
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
KCG EA+++F + N V+W +I G Q + +E+L +F+++ +
Sbjct: 341 KCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQ-----------YGCFSESLELFNQMRAE 389
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
M D + ++I++ CS + + Q+H+L+LK+G VV+ +L++MY KCG ++ A
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNA 449
Query: 443 SRVFVEMSTRTLISWTSMITGFA-------------------------------NHSLSH 471
+F M R ++SWT M+T ++ H
Sbjct: 450 ESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEE 509
Query: 472 QALQLFEDMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM- 529
L+++ ML V P+ VT+V C++ G LG ++ K+ ++D +
Sbjct: 510 DGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGA--NKLGD-QITGHTVKVGLILDTSVM 566
Query: 530 -CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+I M+ + G I EA FDF+ + D V W+ I G +HG + + +LK
Sbjct: 567 NAVITMYSKCGRISEARKIFDFLSRKDL----VSWNAMITGYSQHGMGKQAIEIFDDMLK 622
Query: 586 LKPK-DCESYAMLL 598
K D SY +L
Sbjct: 623 KGAKPDYISYVAVL 636
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 222/446 (49%), Gaps = 49/446 (10%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EALSV + G ++ +++Y S L C SL + +HA ++++ D +V + +
Sbjct: 276 REALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAM 335
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +Y KCG +EA++VF +L N VSWT LI G++Q ++ +F M
Sbjct: 336 VELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQ 395
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ CS+ + L +Q+H+ +K + NSL S+Y+ CG+L +A F+
Sbjct: 396 FALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSS 455
Query: 236 IREKNVMSWT-------------------------------TVIGACGENGEAVQGLRFF 264
+ E++++SWT ++GA ++G GL+ +
Sbjct: 456 MEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMY 515
Query: 265 SKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
S ML+E + P+ T ++ C M + ++G Q+ +K+G + V N+++ +Y K
Sbjct: 516 SAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSK 575
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EA+K+FD +S +LV+WNAMI G++Q H G +A+ IF + G
Sbjct: 576 CGRISEARKIFDFLSRKDLVSWNAMITGYSQ-----------HGMGKQAIEIFDDMLKKG 624
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCGRIERA 442
KPD ++ ++L+ CS +++G+ + + +S + + +V++ + G + A
Sbjct: 625 AKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEA 684
Query: 443 SRVFVEMSTR-TLISWTSMITGFANH 467
+ EM + T W ++++ H
Sbjct: 685 KNLIDEMPMKPTAEVWGALLSACKTH 710
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 194/425 (45%), Gaps = 26/425 (6%)
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
TE + N + + Y+ GSL+ A + F R+ ++V SW T++ ++G + + F
Sbjct: 91 TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFV 150
Query: 266 KMLSEGIQ-PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
M G PN FT CG + V Q+ L K G+ + V I+ ++++C
Sbjct: 151 SMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRC 210
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM--------------------DLAKDDLS 364
G VD A K F + + N+M+AG+A+ ++ LS
Sbjct: 211 GAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALS 270
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
EALS+ +++ G++ D T++S LT C++L +L G+Q+HA +++ D
Sbjct: 271 QSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPY 330
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +A+V +Y KCG + A RVF + R +SWT +I GF + ++L+LF M
Sbjct: 331 VASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAEL 390
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ +Q ++ CSN + A + K + V+ LI M+ + G ++ A
Sbjct: 391 MTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISN-SLISMYAKCGNLQNA 449
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
M+ E + V W+ + + GN+ A E + ++ ++ +L ++
Sbjct: 450 ESIFSSME-ERDIVSWTGMLTAYSQVGNIG---KAREFFDGMSTRNVITWNAMLGAYIQH 505
Query: 605 GRWED 609
G ED
Sbjct: 506 GAEED 510
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 151/329 (45%), Gaps = 61/329 (18%)
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG-MSHVNLVTWNAMIAGHAQMMD 357
H + +G AS + ++N++++ YL CG + +A+ L G ++ N++T N M+ G+A++
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 358 LA----------KDDLSAHN--------GGT--EALSIFSKLNSSGMK-PDLYTFSSILT 396
L+ + D+++ N G +A+ F + SG P+ +TF +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C L E Q+ L K GF D V T +V+M+ +CG ++ AS+ F ++ T+
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFC 230
Query: 457 WTSMITGFANHSLSHQALQLFE-------------------------------DMLLAGV 485
SM+ G+A AL+LFE DM GV
Sbjct: 231 RNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRGV 290
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY-KIKPVMDHYM--CLIDMFVRLGCIE 542
R + T+ +L AC+ +LG+ + + + + P +D Y+ +++++ + GC +
Sbjct: 291 RLDSTTYTSSLTACAK----LSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFK 346
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
EA + + N V W+V I G ++G
Sbjct: 347 EARRVFSSLR-DRNTVSWTVLIGGFLQYG 374
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV+L + C + + + I H VK G D VM ++ +Y KCG + EA+K+FD L
Sbjct: 530 TYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFL 589
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
R ++VSW ++I+GY Q+ + AI +F DML+ G P ++ L++CS ++ GK
Sbjct: 590 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGK 649
Query: 196 QIHAYVVKYQTEDDTSVG----NSLCSLYSTCGSLNSAIKAFNRIREKNVMS----WTTV 247
Y + + + S G + + L + G+L I+A N I E + W +
Sbjct: 650 ---FYFDMLKRDHNVSPGLEHFSCMVDLLARAGNL---IEAKNLIDEMPMKPTAEVWGAL 703
Query: 248 IGACGENG 255
+ AC +G
Sbjct: 704 LSACKTHG 711
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/657 (33%), Positives = 384/657 (58%), Gaps = 27/657 (4%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K ++ A ++FD++P +VVSW ++S Q+ + A+ + +DM G + T
Sbjct: 214 YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 273
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
++LTAC+ L S+R GKQ+HA V++ D V ++L LY+ CG A FN + +
Sbjct: 274 TSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLHD 333
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N ++WT +I ++G + + F++M +E + ++F L ++ S C + + L +G Q+
Sbjct: 334 RNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HSL +K G + V NS++ +Y KC + A+ +F M+ ++V+W +MI H+Q+ ++
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNI 453
Query: 359 AK-----DDLSA---------------HNGGTEALSIFS-KLNSSGMKPDLYTFSSILTI 397
AK D +S H + L +++ L+ ++PD T+ ++
Sbjct: 454 AKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKG 513
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ L A + G+QI T+K G + D V A++ MY KCGRI A +VF ++ + ++SW
Sbjct: 514 CADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSW 573
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+MITG++ H + QA+++F+D+L G +P+ +++V L+ CS++G+V E YF+MM++
Sbjct: 574 NAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKR 633
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
+ I P ++H+ C++D+ R G + EA D I +M +P +W ++ C+ HGN EL
Sbjct: 634 VHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAE 693
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AA+ + +L D SY ++ I+ AG+ +D A ++ L R++ + + +SW+ + +KV
Sbjct: 694 LAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKV 753
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGL 697
+ FK +D HPQ I K LDEL+EK GY + TD + ++HSEKLA+AFGL
Sbjct: 754 HVFKADDVSHPQVIAIRKKLDELMEKIARLGYVR------TDSPRSEIHHSEKLAVAFGL 807
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ P PI ++K+ +C DCH IK+I+S+T RE ++RD+ R H F G C+C D+
Sbjct: 808 MSLPAWMPIHIMKNLRICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDY 864
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 263/564 (46%), Gaps = 88/564 (15%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
+H + ++N Y K G + +A ++F +P +V SW +L+SGY Q+ Q ++ F+
Sbjct: 67 AHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFV 126
Query: 165 DMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
M +G+ P T A+ +C +L L Q+ V K+ ++DD+ V +L ++ C
Sbjct: 127 SMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRC 186
Query: 224 GSLNSAIKAFNRIR-------------------------------EKNVMSWTTVIGACG 252
G+++ A + F RI+ E++V+SW ++ A
Sbjct: 187 GTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
++G + L M S+G++ + T TS + C + SLR G Q+H+ I+ +
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPY 306
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V ++++ LY KCG EA+ +F+ + N V W +IAG Q H TE+
Sbjct: 307 VASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQ-----------HGCFTES 355
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F+++ + M D + +++++ C + L G Q+H+L LK+G + VVV +L++M
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMIT------------------------------ 462
Y KC ++ A +F M+ + ++SWTSMIT
Sbjct: 416 YAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAML 475
Query: 463 -GFANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
+ H L+++ ML VRP+ VT+V C++ G LG +++ + K
Sbjct: 476 GAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGA--NKLGD-QIIGRTVK 532
Query: 521 IKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ ++D + +I M+ + G I EA FDF+ D V W+ I G +HG +
Sbjct: 533 VGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDI----VSWNAMITGYSQHGMGKQ 588
Query: 576 GFYAAEQLLKLKPK-DCESYAMLL 598
+ +LK K D SY +L
Sbjct: 589 AIEIFDDILKRGAKPDYISYVAVL 612
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 224/446 (50%), Gaps = 49/446 (10%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ ++G ++ +++Y S L C SL + +HA +++ D +V + L
Sbjct: 252 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASAL 311
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +Y KCG +EA+ VF++L N V+WT LI+G++Q+ ++ +F M
Sbjct: 312 VELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQ 371
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C S + LG+Q+H+ +K V NSL S+Y+ C +L SA F
Sbjct: 372 FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRF 431
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ EK+++SWT++I GA ++G GLR +
Sbjct: 432 MNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMY 491
Query: 265 SKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+ MLSE ++P+ T ++ C + + ++G Q+ +K+G + V N+++ +Y K
Sbjct: 492 NVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSK 551
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EA+K+FD ++ ++V+WNAMI G++Q H G +A+ IF + G
Sbjct: 552 CGRILEARKVFDFLNVKDIVSWNAMITGYSQ-----------HGMGKQAIEIFDDILKRG 600
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCGRIERA 442
KPD ++ ++L+ CS +++G+ + + +S + + +V++ + G + A
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 443 SRVFVEMSTR-TLISWTSMITGFANH 467
+ EM + T W ++++ H
Sbjct: 661 KDLIDEMPMKPTAEVWGALLSACKIH 686
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 61/329 (18%)
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMD 357
H + +G AS + ++N++++ YL CG + +A++L ++H N++T N M+ G+ ++
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 358 LAK----------DDLSAHNGGTE----------ALSIFSKLNSSG-MKPDLYTFSSILT 396
L+ D+++ N +L F ++ SG P+ +TF+ +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE-------- 448
C L Q+ + K G D V ALV+M+ +CG ++ ASR+FV
Sbjct: 147 SCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFC 206
Query: 449 -----------------------MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
M R ++SW M++ + +AL + DM GV
Sbjct: 207 RNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY-KIKPVMDHYM--CLIDMFVRLGCIE 542
R + T+ +L AC+ +L + + + + + P +D Y+ L++++ + GC +
Sbjct: 267 RLDSTTYTSSLTACAR----LSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFK 322
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
EA + + N V W+V IAG +HG
Sbjct: 323 EAKGVFNSL-HDRNNVAWTVLIAGFLQHG 350
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV+L + C + + + I VK G D V ++ +Y KCG + EA+KVFD L
Sbjct: 506 TYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFL 565
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
++VSW ++I+GY Q+ + AI +F D+L+ G P ++ L+ CS ++ GK
Sbjct: 566 NVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGK 625
Query: 196 QIHAYVVKYQTEDDTSVG----NSLCSLYSTCGSLNSAIKAFNRIREKNVMS-WTTVIGA 250
+Y + + S G + + L G L A + + K W ++ A
Sbjct: 626 ---SYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSA 682
Query: 251 CGENG 255
C +G
Sbjct: 683 CKIHG 687
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 30/264 (11%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ ++N Y K GR+ A +F M R + SW ++++G+ +L+ F M
Sbjct: 70 NVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMH 129
Query: 482 LAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+G PN TF A+ +C G AL M+QK + + D L+DMFVR G
Sbjct: 130 RSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQK-FGSQDDSDVAAALVDMFVRCGT 188
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF---YAAEQLLKL----KPKDCES 593
++ A ++ EP ++F CR +M +G+ Y + L+L +D S
Sbjct: 189 VDLASRLFVRIK-EP-----TIF---CR--NSMLVGYVKTYGVDHALELFDSMPERDVVS 237
Query: 594 YAMLLDIFVSAGRWEDV--AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+ M++ +GR + VV ++ +L T S + ++ S + LH Q
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVI 297
Query: 652 EIFKVLD--------ELVEKAKCF 667
+D EL K CF
Sbjct: 298 RNLPCIDPYVASALVELYAKCGCF 321
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 255/772 (33%), Positives = 423/772 (54%), Gaps = 91/772 (11%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG---------- 123
+ Y S LQ + K + IHA I+K G H F+M L+N Y K G
Sbjct: 13 SDPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFD 72
Query: 124 ---------------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
+EEA +VF+ +P + VSWT++I GY Q Q E AI +
Sbjct: 73 EMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGM 132
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F +M+ PT TL L +C+++E + +G+++H++VVK+ SV NSL ++Y+
Sbjct: 133 FREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAK 192
Query: 223 CGSLNSAIKAFNRIR-------------------------------EKNVMSWTTVIGAC 251
G +A F+R++ E++V+SW +I
Sbjct: 193 SGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGY 252
Query: 252 GENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
++G + L FSKML + +P++FTL S S C + +L++G Q+H+ I+ + +
Sbjct: 253 NQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTF 312
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDL---------- 358
V N+++ +Y K G V+ AQK+ + +S+++++ + A++ G+ ++ D+
Sbjct: 313 GAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL 372
Query: 359 -AKDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+D ++ NG +A+ +F + G KP+ YT +++L++ S L +L+ G
Sbjct: 373 RVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGR 432
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
QIHA ++G S V V AL+ MY K G I A VF + R I+WTSMI A H
Sbjct: 433 QIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQH 492
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
L +AL LFE ML G++P+ +T+VG L+AC++ G+V + Y+ +MQ +KI P H
Sbjct: 493 GLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSH 552
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
Y C+ID+F R G ++EA FI+ M EP+ + W +A C+ H N+EL AAE+LL ++
Sbjct: 553 YACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIE 612
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
P++ +Y+ L +++ + G+WE+ A ++ +++ + + +SW++IK+KV+ F +DGLH
Sbjct: 613 PENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLH 672
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPI 702
PQ I++++ ++ ++ K G+ L D +E +HSEKLAIAFGL+ TP
Sbjct: 673 PQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPE 732
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + ++K+ +C DCH+ IK I+ L REIIVRD+ R H F NG C+CRD+
Sbjct: 733 NTTLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDY 784
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/668 (36%), Positives = 383/668 (57%), Gaps = 25/668 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +VK G + V L+N+Y KCGN+ +A+ +FD +VV+W S+ISGY N
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F M + + + + C++L+ +R +Q+H VVKY D ++ +
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339
Query: 216 LCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L YS C ++ A++ F NV+SWT +I +N + + FS+M +G++P
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
NEFT SV T L + ++VH+ +K Y + V +++ Y+K G VDEA K+F
Sbjct: 400 NEFTY----SVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSS 393
G+ + ++V W+AM+AG+AQ G TEA + IFS+L G+KP+ +TFSS
Sbjct: 456 SGIDNKDIVAWSAMLAGYAQA------------GETEAAIKIFSELTKGGVKPNEFTFSS 503
Query: 394 ILTICSRLVA-LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
IL +C+ A + QG+Q H +K+ S + V +AL+ MY K G IE A VF +
Sbjct: 504 ILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREK 563
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L+SW SMI+G+A H + +AL +F++M V+ + VTF+G AAC++AG+V E YF
Sbjct: 564 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYF 623
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++M ++ KI P +H C++D++ R G +E+A I M IW +A CR H
Sbjct: 624 DIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKK 683
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
ELG AAE+++ + P+D +Y +L +++ +G W++ A V+ L E + + +SWI
Sbjct: 684 TELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 743
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYH 687
+K+K Y+F D HP +I+ L++L + K GY+ S+ L D +E+ H
Sbjct: 744 VKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQH 803
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF-VN 746
SE+LAIAFGL+ TP SP+L++K+ +C DCH IK+I + REI+VRDS R H F +
Sbjct: 804 SERLAIAFGLIATPKGSPLLIIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSD 863
Query: 747 GHCTCRDF 754
G C+C DF
Sbjct: 864 GVCSCGDF 871
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/499 (29%), Positives = 257/499 (51%), Gaps = 25/499 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G D V T LV+ Y K N ++ + VFD + NVV+WT+LISGY +NS
Sbjct: 119 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSL 178
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E + +F+ M + G P + T AL + G Q+H VVK + V NS
Sbjct: 179 NEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 238
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +LY CG++ A F++ K+V++W ++I NG ++ L F M ++ +
Sbjct: 239 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLS 298
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E + SI +C + LR Q+H +K G+ + +R ++M Y KC + +A +LF
Sbjct: 299 ESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFK 358
Query: 336 GMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ N+V+W AMI+G Q ++G EA+ +FS++ G++P+ +T+S I
Sbjct: 359 ETGFLGNVVSWTAMISGFLQ-----------NDGKEEAVGLFSEMKRKGVRPNEFTYSVI 407
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
LT + E +HA +KT + VGTAL++ Y K G+++ A++VF + + +
Sbjct: 408 LTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDI 463
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
++W++M+ G+A + A+++F ++ GV+PN+ TF L C+ ++G +
Sbjct: 464 VAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCA---ATTASMGQGKQ 520
Query: 515 MQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ IK +D +C L+ M+ + G IE A + K+ E + V W+ I+G +H
Sbjct: 521 FHG-FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMISGYAQH 578
Query: 571 GNMELGFYAAEQLLKLKPK 589
G +++ K K K
Sbjct: 579 GQAMKALDVFKEMKKRKVK 597
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 235/466 (50%), Gaps = 20/466 (4%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +FD P + S+TSL+ G+ ++ + + A +FL++ G + L ++
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L G+Q+H +K+ DD SVG SL Y + F+ ++E+NV++WTT+
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I N + L F +M EG QPN FT + V G QVH++ +K G
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V NS++ LYLKCG V +A+ LFD ++VTWN+MI+G+A A+
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-----------ANG 278
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F + + ++ +F+SI+ +C+ L L EQ+H +K GF+ D + T
Sbjct: 279 LDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRT 338
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+ Y KC + A R+F E ++SWT+MI+GF + +A+ LF +M GVR
Sbjct: 339 ALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVR 398
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+ T+ L A ++ + + ++++ Y+ + L+D +V+LG ++EA
Sbjct: 399 PNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVDEAAK 453
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
+D + V WS +AG + G E +L K +KP +
Sbjct: 454 VFSGID-NKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNE 498
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 184/371 (49%), Gaps = 21/371 (5%)
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F++ +++ S+T+++ +G + R F + G++ + +S+ V T+
Sbjct: 54 FDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDE 113
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G Q+H IK G+ ++ V S++ Y+K + + +FD M N+VTW +I+G+
Sbjct: 114 LFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGY 173
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
A+ ++ E L++F ++ G +P+ +TF++ L + + +G Q+H
Sbjct: 174 AR-----------NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 222
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+ +K G + V +L+N+Y KCG + +A +F + +++++W SMI+G+A + L +
Sbjct: 223 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 282
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ-KEYKIKPVMDHYMCL 531
AL +F M L VR ++ +F + C+N + L + E + K V D +
Sbjct: 283 ALGMFYSMRLNHVRLSESSFASIIKLCAN----LKELRFTEQLHCSVVKYGFVFDQNIRT 338
Query: 532 IDMFVRLGCIE--EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLK 587
M C+ +A K+ F N V W+ I+G ++ E +G ++ + ++
Sbjct: 339 ALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVR 398
Query: 588 PKDCESYAMLL 598
P + +Y+++L
Sbjct: 399 PNEF-TYSVIL 408
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 7/199 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECV-NRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ A+ + +E G K ++ S+L C S+ + H +K+ V +
Sbjct: 480 EAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSA 539
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y K G++E A++VF ++VSW S+ISGY Q+ Q A+ VF +M +
Sbjct: 540 LLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 599
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS-LCSLYSTCGSLNSAIKAF 233
+VT AC+ + G++ +V+ T NS + LYS G L A+K
Sbjct: 600 SVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 659
Query: 234 NRIRE-KNVMSWTTVIGAC 251
+ + W T++ AC
Sbjct: 660 DNMPNLAGSTIWRTILAAC 678
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/698 (34%), Positives = 392/698 (56%), Gaps = 20/698 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ EG K + S+L+ C + + E+IH +VK G + FV+T LV++Y KC
Sbjct: 152 SMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCK 211
Query: 124 NMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+ EA+ +F L R N V WT++++GY QN A+ F M G T T
Sbjct: 212 CVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTI 271
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
LTACSS+ + G+Q+H ++VK + V ++L +Y+ CG L +A + + +V
Sbjct: 272 LTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDV 331
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW +++ +G + LR F M ++ +++T S+ + C ++ VH L
Sbjct: 332 VSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGL 389
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK G+ + V N+++ +Y K G +D A +F+ M ++++W +++ G+AQ
Sbjct: 390 IIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQ------- 442
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+N E+L IF + +G+ PD + +SIL+ C+ L LE G+Q+H +K+G
Sbjct: 443 ----NNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRW 498
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
V +LV MY KCG ++ A +FV M + +I+WT++I G+A + +L+ ++ M+
Sbjct: 499 SQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 558
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+G RP+ +TF+G L ACS+AG+V E YF+ M K Y IKP +HY C+ID+F R G +
Sbjct: 559 SSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKL 618
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA + +MD +P+ +W ++ CR H N+EL AA L +L+P + Y ML +++
Sbjct: 619 DEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMY 678
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
++ +W DVA ++ L + + + + SW+ I +V +F +D HP+ AEI+ +DE++
Sbjct: 679 SASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEII 738
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ K GY SF L D +E YHSEKLA+AFGLL P +PI + K+ +C
Sbjct: 739 LRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAPIRIFKNLRVCG 798
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ +K I+ + R II+RDS H F G C+C D+
Sbjct: 799 DCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDY 836
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 258/518 (49%), Gaps = 52/518 (10%)
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL------------ 146
H S++ + L+N K G + +A+K+FD +P+ + SW ++
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 147 -------------------ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
ISGY + A +F M G + TLG+ L CSS
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR--EKNVMSWT 245
L I+ G+ IH +VVK E + V L +Y+ C ++ A F + KN + WT
Sbjct: 175 LGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWT 234
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
++ +NG+ + + FF M ++G++ N++T +I + C ++L+ G QVH +K
Sbjct: 235 AMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKS 294
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G+ SN+ V+++++ +Y KCG + A+ + + M ++V+WN+++ G +
Sbjct: 295 GFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVR----------- 343
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
H EAL +F ++ MK D YTF S+L C +V + +H L +KTGF + +V
Sbjct: 344 HGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLV 401
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
ALV+MY K G ++ A VF +M + +ISWTS++TG+A ++ ++L++F DM + GV
Sbjct: 402 SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGV 461
Query: 486 RPNQVTFVGALAACSNAGMV-YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+Q L+AC+ ++ + + + ++ + + Y L+ M+ + GC+++A
Sbjct: 462 NPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGCLDDA 519
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAA 580
M + + + W+ I G ++G L FY A
Sbjct: 520 DAIFVSMQVK-DVITWTAIIVGYAQNGKGRNSLKFYDA 556
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 239/710 (33%), Positives = 398/710 (56%), Gaps = 20/710 (2%)
Query: 54 VRSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V+S E + + + EG ++ + ++L+ V+ + A +HA I K G +
Sbjct: 17 VQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNA 76
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV T L++ Y CG++ A++ FD + ++VSWT +++ Y +N + + ++ +F +M
Sbjct: 77 FVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMV 136
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P + T L AC LE+ +GK +H V+K E D VG L LY+ G N
Sbjct: 137 GFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDV 196
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
++ F + + +V+ W+ +I ++ ++ + + F +M + PN+FT S+ C ++
Sbjct: 197 LRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASI 256
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+L++G QVH +K+G N+ V N++M +Y KCG +D + KLF + + N VTWN MI
Sbjct: 257 ENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMI 316
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G+ Q D G +ALS++ + ++ T+SS+L C+ L A+E G Q
Sbjct: 317 VGYVQSGD-----------GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQ 365
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH+L+LKT + DVVVG AL++MY KCG I+ A VF +S R ISW +MI+G++ H L
Sbjct: 366 IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGL 425
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL+ F+ M PN++TFV L+ACSNAG++ YF+ M ++Y I+P M+HY
Sbjct: 426 VGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYT 485
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++ + R G +++A I+++ EPN +W + C H +++LG +A+Q+L++ P+
Sbjct: 486 CMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQ 545
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D ++ +L +I+ RW VA V+ + + + + SWI + V+ F D HP
Sbjct: 546 DEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPD 605
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVS 704
I +L+ L K + GY + L D E HSE+LA+AFGL+ TP
Sbjct: 606 MKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAFGLIRTPSRG 665
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I ++K+ +C DCH+ IK+I+ + R+II+RD R H F +G C+C D+
Sbjct: 666 HIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDY 715
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 230/441 (52%), Gaps = 21/441 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P N VS+ +LI GYVQ+ Q + + +F + G+ T L S+E L
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+HA + K E + VG +L Y+ CGS+NSA +AF+ I K+++SWT ++ EN
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
L+ F++M G PN FT + C + + VG VH +K Y +L V
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++ LY K G ++ ++F+ M +++ W+ MI+ +AQ N EA+
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQ-----------SNQSREAVE 229
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ + + P+ +TF+S+L C+ + L+ G+Q+H LK G +V V AL+++Y
Sbjct: 230 LFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYA 289
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCGR++ + ++F+E+ R ++W +MI G+ +AL L+++ML V+ ++VT+
Sbjct: 290 KCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSS 349
Query: 495 ALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKK 550
L AC++ A M + ++ Y V+ + LIDM+ + G I+ A FD + +
Sbjct: 350 VLRACASLAAMELGTQIHSLSLKTIYDKDVVVGN--ALIDMYAKCGSIKNARLVFDMLSE 407
Query: 551 MDFEPNEVIWSVFIAGCRRHG 571
D E+ W+ I+G HG
Sbjct: 408 RD----EISWNAMISGYSMHG 424
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/692 (33%), Positives = 391/692 (56%), Gaps = 16/692 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ + ++L+ V+ + I+H ++K G + F+ T L++ Y G +
Sbjct: 40 EGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSM 99
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++VFD + ++VSWT +I+ Y +N A+ F M AG P N T L AC
Sbjct: 100 AREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLG 159
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L++ GK +H V+K E D VG L LY+ CG + A +AF + + +V+ W+ +
Sbjct: 160 LQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFM 219
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I ++G++ + L F +M + PN+FT +S+ + SL + +H +K G
Sbjct: 220 ISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGL 279
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++++ V N++M Y KCG ++++ +LF+ +S N V+WN +I + Q+ D
Sbjct: 280 STDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGD---------- 329
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G ALS+FS + ++ T+SSIL C+ L ALE G Q+H LT KT + DV VG
Sbjct: 330 -GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN 388
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG I+ A +F + R +SW ++I G++ H L +A+++F M +P
Sbjct: 389 ALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKP 448
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+++TFVG L+ACSN G + E YF M+++Y I+P M+HY C++ + R G +++A F
Sbjct: 449 DELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKF 508
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I+ + FEP+ +IW + C H ++ELG +A+++L+L+P+D S+ +L +I+ A RW
Sbjct: 509 IEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRW 568
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+VA V+ + + + + SWI + V+ F D H I +L+ L K +
Sbjct: 569 GNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKA 628
Query: 668 GYKQQES---FELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY Q + ++ D+E + HSE+LA+AFGL+ P PI ++K+ +C DCH+ I
Sbjct: 629 GYSPQLNAVLLDVEDDEKERLLWLHSERLALAFGLVRMPAGCPIRIIKNLRICVDCHSVI 688
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ + R+IIVRD R H F NG C+C D+
Sbjct: 689 KLISKIVGRDIIVRDMNRFHHFENGSCSCADY 720
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 227/463 (49%), Gaps = 18/463 (3%)
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P N VS+ +LI GY Q+++ A +F + G+ T L S+E
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
LG+ +H V+K +T +G +L YS G ++ A + F+ I K+++SWT +I +
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
EN + L FFS+M G +PN FT + C + + G VH +K Y +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
L V ++ LY +CG D+A + F M +++ W+ MI+ AQ +G +
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQ------------SGQS 229
Query: 371 E-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
E AL IF ++ + + P+ +TFSS+L + + +L+ + IH LK G +DV V AL
Sbjct: 230 EKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNAL 289
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ Y KCG IE++ +F +S R +SW ++I + +AL LF +ML V+ +
Sbjct: 290 MACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATE 349
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT+ L AC+ + L + K + V LIDM+ + G I++A
Sbjct: 350 VTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGN-ALIDMYAKCGSIKDARFMFD 408
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+D ++V W+ I G HG LG A + +K C+
Sbjct: 409 MLDLR-DKVSWNAIICGYSMHG---LGVEAIKMFNLMKETKCK 447
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/665 (35%), Positives = 372/665 (55%), Gaps = 18/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G FV L++ Y K G + A++VF + + V++ +++ G +
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F M AG T+ T + LT + + + LG Q+HA V++ + + V NS
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L YS C L+ + F+ + E++ +S+ +I A N A LR F +M G
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
++ SV G++ + +G Q+H+ + LG AS + N+++ +Y KCG++D A+ F
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSI 394
S + ++W A+I G+ Q NG EAL +FS + +G++PD TFSSI
Sbjct: 397 NRSEKSAISWTALITGYVQ------------NGQHEEALQLFSDMRRAGLRPDRATFSSI 444
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ S L + G Q+H+ +++G+ S V G+ LV+MY KCG ++ A R F EM R
Sbjct: 445 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNS 504
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISW ++I+ +A++ + A+++FE ML G P+ VTF+ LAACS+ G+ E + YF +
Sbjct: 505 ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHL 564
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ +Y I P +HY C+ID R+GC + + +M F+ + +IW+ + CR HGN E
Sbjct: 565 MKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQE 624
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AA++L ++P D Y +L +I+ AG+WED A VK + R+ + + +SW+ IK
Sbjct: 625 LARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIK 684
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTDEE---SASVYHSE 689
K+YSF ND P EI LD L ++ GYK + + D E + YHSE
Sbjct: 685 QKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSE 744
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LAIAF L+NTP +PI ++K+ T C DCH IK+I+ + R+IIVRDS+R H F +G C
Sbjct: 745 RLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVC 804
Query: 750 TCRDF 754
+C D+
Sbjct: 805 SCGDY 809
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 116/214 (54%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
Q Y ++L + + + IHA +V G + + L+++Y KCG ++ A+ F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
N + +SWT+LI+GYVQN Q E A+ +F DM AG P T + + A SSL I
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LG+Q+H+Y+++ + G+ L +Y+ CG L+ A++ F+ + E+N +SW VI A
Sbjct: 456 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYA 515
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
GEA ++ F ML G P+ T S+ + C
Sbjct: 516 HYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 549
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 40/387 (10%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N + S YS+ G L +A F +N +WT ++ A G L F ML EG+
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ T+T++ ++ G + +H IK G +++ V N+++ Y K GL+ A+++
Sbjct: 138 PDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M + VT+NAM MM +K+ L T+AL +F+ + +G+ +TFSS
Sbjct: 193 FLEMHDKDAVTYNAM------MMGCSKEGLH-----TQALQLFAAMRRAGIPATHFTFSS 241
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
ILT+ + + L G Q+HAL L++ + +V V +L++ Y KC ++ R+F EM R
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAG----VRP--NQVTFVGALAACSNAGMVYE 507
+S+ +I +A + + L+LF +M G V P ++ G+L ++
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF----EPNEVIWSVF 563
L + ++ LIDM+ + G ++ A K +F E + + W+
Sbjct: 362 QLVLLGLASEDLLGN-------ALIDMYSKCGMLDAA-----KSNFSNRSEKSAISWTAL 409
Query: 564 IAGCRRHGNME--LGFYAAEQLLKLKP 588
I G ++G E L ++ + L+P
Sbjct: 410 ITGYVQNGQHEEALQLFSDMRRAGLRP 436
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + ++ G + +++ S+++ + + +H++++++G F + L
Sbjct: 420 EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 479
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KCG ++EA + FD +P N +SW ++IS Y + + AI +F ML G P +
Sbjct: 480 VDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDS 539
Query: 176 VTLGTALTACS 186
VT + L ACS
Sbjct: 540 VTFLSVLAACS 550
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 250/752 (33%), Positives = 398/752 (52%), Gaps = 84/752 (11%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYGKCGNMEEAQKVF 132
+S Y +LL R A +H I++T H ++ L+ YGK G A++VF
Sbjct: 6 SSQYAALLSAAA-RTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVF 64
Query: 133 DNLPRINV-------------------------------VSWTSLISGYVQNSQPELAIH 161
D P N+ VS+ ++I+G+ A+
Sbjct: 65 DATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVR 124
Query: 162 VFLDMLEAGN--YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
++ +L AG+ P+ +T+ + A S+L LG+Q H +++ + VG+ L +
Sbjct: 125 LYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGM 184
Query: 220 YSTCGSLNSAIKAFNRIREKNV-------------------------------MSWTTVI 248
Y+ G + A + F+ + KNV ++WTT++
Sbjct: 185 YAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMV 244
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG Q L FF +M +GI +++T SI + CG + +L G Q+H+ I+ Y
Sbjct: 245 TGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYD 304
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N+ V ++++ +Y KC + A+ F MS N+++W A+I G+ Q NG
Sbjct: 305 DNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQ------------NG 352
Query: 369 GTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+E A+ +FS++ G+ PD +T S+++ C+ L +LE+G Q H L L +G + + V
Sbjct: 353 CSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSN 412
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV +Y KCG IE A R+F EM +SWT+++TG+A + + + LFE ML V+P
Sbjct: 413 ALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKP 472
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTF+G L+ACS AG V + YF MQK++ I P+ DHY C+ID++ R G ++EA +F
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEF 532
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
IK+M P+ + W ++ CR G+ME+G +AAE LL++ P++ SY +L + + G W
Sbjct: 533 IKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNW 592
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
VA ++ R+ ++ + SWI+ K+KV+ F +D HP S I++ L+ L K
Sbjct: 593 NQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSKGIYEKLEWLNSKMLEE 652
Query: 668 GYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GYK S L TD+ +HSEKLAIAFGL+ P PI +VK+ +C DCHN
Sbjct: 653 GYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLMFVPHEMPIRIVKNLRVCVDCHNAT 712
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ +T R+I+VRD+ R HKF NG C+C DF
Sbjct: 713 KLISKITGRDILVRDAVRFHKFSNGVCSCGDF 744
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 147/285 (51%), Gaps = 2/285 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + ++ S+L C +L + IHA+I++T + FV + LV++Y KC +++
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKP 325
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ F + N++SWT+LI GY QN E A+ VF +M G P + TLG+ +++C++
Sbjct: 326 AETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCAN 385
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ G Q H + +V N+L +LY CGS+ A + F+ + + +SWT +
Sbjct: 386 LASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTAL 445
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLG 306
+ + G A + + F KML++ ++P+ T + S C + G + HS+ G
Sbjct: 446 VTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHG 505
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
++ LY + G + EA++ M H + + W +++
Sbjct: 506 IVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLS 550
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 150/360 (41%), Gaps = 76/360 (21%)
Query: 282 ISSVCGTMLSLRVGAQVHSLGI-------KLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+SS +LS + H+ G L + + N ++ Y K G A+++F
Sbjct: 5 LSSQYAALLSAAARTEPHAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVF 64
Query: 335 DGMSHVNLVTWNAMIA--GHAQMMD--------LAKDDLSAHN-------GG---TEALS 374
D H NL T+NA+++ HA+++D +A+ D ++N GG A+
Sbjct: 65 DATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVR 124
Query: 375 IFSKLNSSG--MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++ L +G ++P T S+++ S L G Q H L+ GF + VG+ LV M
Sbjct: 125 LYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGM 184
Query: 433 YKKCGRIERASRVFVE-------------------------------MSTRTLISWTSMI 461
Y K G I A RVF E M+ R I+WT+M+
Sbjct: 185 YAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMV 244
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
TGF + L QAL F M G+ +Q TF L AC AL E K+
Sbjct: 245 TGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACG-------ALSALE-QGKQIHA 296
Query: 522 KPVMDHY-------MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ HY L+DM+ + I+ A ++M + N + W+ I G ++G E
Sbjct: 297 YIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK-NIISWTALIVGYGQNGCSE 355
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 248/754 (32%), Positives = 407/754 (53%), Gaps = 23/754 (3%)
Query: 10 AACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEG 69
A+ +L ++RQ S N S KL + +GN + +E+ V+ +
Sbjct: 43 ASLSLSAQTRQTKSLSFANSSTNRQFSSLHEIKKLCE-SGNLKEALDFLQRESDDVVLDS 101
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
+ ++ + LLQ C RK + +H + T DF + T ++ +Y CG+ ++
Sbjct: 102 AQ-RSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDS 160
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSS 187
+ VFD L R N+ W +++S Y +N E A+ +F +++ + P N TL + AC+
Sbjct: 161 RMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAG 220
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK-AFNRIREKNVMSWTT 246
L + LG+ IH K D VGN+L ++Y CG + A+K F+ + K V SW
Sbjct: 221 LLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNA 280
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ +N + + L + +M G+ P+ FT+ S+ C M SL G ++H ++ G
Sbjct: 281 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG 340
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
A + + S++ LY+ CG AQ LFDGM H +LV+WN MIAG++Q
Sbjct: 341 LAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQ------------ 388
Query: 367 NG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG EA+++F ++ S G++P + CS+L AL G+++H LK D+ V
Sbjct: 389 NGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFV 448
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+++++MY K G I + R+F + + + SW +I G+ H +AL+LFE ML G+
Sbjct: 449 SSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 508
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+P+ TF G L ACS+AG+V + L YF M + I+P ++HY C++DM R G I++A
Sbjct: 509 KPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDAL 568
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I++M +P+ IWS ++ CR HGN+ LG A +LL+L+P+ E+Y ++ ++F +G
Sbjct: 569 RLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSG 628
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+W+DV V+ ++ L + SWI + KV++F D + P+ E+ + L K
Sbjct: 629 KWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKIS 688
Query: 666 CFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY +L +E+ + HSEKLAI+FGLLNT P+ V K+ +C DCHN
Sbjct: 689 SIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHN 748
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + R+I+VRD+KR H F +G C+C D+
Sbjct: 749 AAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDY 782
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/665 (35%), Positives = 372/665 (55%), Gaps = 18/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G FV L++ Y K G + A++VF + + V++ +++ G +
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 216
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F M AG T+ T + LT + + + LG Q+HA V++ + + V NS
Sbjct: 217 HTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNS 276
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L YS C L+ + F+ + E++ +S+ +I A N A LR F +M G
Sbjct: 277 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 336
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
++ SV G++ + +G Q+H+ + LG AS + N+++ +Y KCG++D A+ F
Sbjct: 337 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 396
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSI 394
S + ++W A+I G+ Q NG EAL +FS + +G++PD TFSSI
Sbjct: 397 NRSEKSAISWTALITGYVQ------------NGQHEEALQLFSDMRRAGLRPDRATFSSI 444
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ S L + G Q+H+ +++G+ S V G+ LV+MY KCG ++ A R F EM R
Sbjct: 445 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNS 504
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISW ++I+ +A++ + A+++FE ML G P+ VTF+ LAACS+ G+ E + YF +
Sbjct: 505 ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHL 564
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ +Y I P +HY C+ID R+GC + + +M F+ + +IW+ + CR HGN E
Sbjct: 565 MKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQE 624
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AA++L ++P D Y +L +I+ AG+WED A VK + R+ + + +SW+ IK
Sbjct: 625 LARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIK 684
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTDEE---SASVYHSE 689
K+YSF ND P EI LD L ++ GYK + + D E + YHSE
Sbjct: 685 QKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSE 744
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LAIAF L+NTP +PI ++K+ T C DCH IK+I+ + R+IIVRDS+R H F +G C
Sbjct: 745 RLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVC 804
Query: 750 TCRDF 754
+C D+
Sbjct: 805 SCGDY 809
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 116/214 (54%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
Q Y ++L + + + IHA +V G + + L+++Y KCG ++ A+ F
Sbjct: 336 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 395
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
N + +SWT+LI+GYVQN Q E A+ +F DM AG P T + + A SSL I
Sbjct: 396 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 455
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LG+Q+H+Y+++ + G+ L +Y+ CG L+ A++ F+ + E+N +SW VI A
Sbjct: 456 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYA 515
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
GEA ++ F ML G P+ T S+ + C
Sbjct: 516 HYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 549
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 186/387 (48%), Gaps = 40/387 (10%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N + S YS+ G L +A F +N +WT ++ A G L F ML EG+
Sbjct: 78 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ T+T++ ++ G + +H IK G +++ V N+++ Y K GL+ A+++
Sbjct: 138 PDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 192
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M + VT+NAM MM +K+ L T+AL +F+ + +G+ +TFSS
Sbjct: 193 FLEMHDKDAVTYNAM------MMGCSKEGLH-----TQALQLFAAMRRAGIPATHFTFSS 241
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
ILT+ + + L G Q+HAL L++ + +V V +L++ Y KC ++ R+F EM R
Sbjct: 242 ILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 301
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAG----VRP--NQVTFVGALAACSNAGMVYE 507
+S+ +I +A + + L+LF +M G V P ++ G+L ++
Sbjct: 302 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 361
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF----EPNEVIWSVF 563
L + ++ LIDM+ + G ++ A K +F E + + W+
Sbjct: 362 QLVLLGLASEDLLGN-------ALIDMYSKCGMLDAA-----KSNFSNRSEKSAISWTAL 409
Query: 564 IAGCRRHGNME--LGFYAAEQLLKLKP 588
I G ++G E L ++ + L+P
Sbjct: 410 ITGYVQNGQHEEALQLFSDMRRAGLRP 436
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 22/259 (8%)
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N+ N I+ Y G + AQ LF H N TW M+ HA A
Sbjct: 73 NIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHA-----------AAGRT 121
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
++ALS+F + G+ PD T +++L + V +H +K G + V V L
Sbjct: 122 SDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTHVFVCNTL 176
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++ Y K G + A RVF+EM + +++ +M+ G + L QALQLF M AG+
Sbjct: 177 LDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATH 236
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDF 547
TF L AGM + LG+ ++ + V++ ++ L+D + + C+++
Sbjct: 237 FTFSSILTVA--AGMAHLLLGH-QVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRL 293
Query: 548 IKKMDFEPNEVIWSVFIAG 566
+M E + V ++V IA
Sbjct: 294 FDEMP-ERDNVSYNVIIAA 311
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + ++ G + +++ S+++ + + +H++++++G F + L
Sbjct: 420 EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 479
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KCG ++EA + FD +P N +SW ++IS Y + + AI +F ML G P +
Sbjct: 480 VDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDS 539
Query: 176 VTLGTALTACS 186
VT + L ACS
Sbjct: 540 VTFLSVLAACS 550
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/792 (31%), Positives = 415/792 (52%), Gaps = 116/792 (14%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI--------------------VKTGSH 106
T P + + V LLQ + + IHA I VKTGS
Sbjct: 5 TPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSS 64
Query: 107 QDF------------FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
D F +++ + K GN++ A++VFD +P+ + VSWT++I GY
Sbjct: 65 SDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLG 124
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ A+H FL M+ +G PT T L +C++ +++ +GK++H++VVK V N
Sbjct: 125 LFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVAN 184
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKN-------------------------------VMS 243
SL ++Y+ CG A F+R+R K+ ++S
Sbjct: 185 SLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVS 244
Query: 244 WTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W ++I G ++ L FS ML S ++P++FTL S+ S C SL++G Q+H+
Sbjct: 245 WNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHI 304
Query: 303 IKLG--------------YAS-------------------NLRVRNSIMYLYLKCGLVDE 329
++ YA N+ S++ Y K G +D
Sbjct: 305 VRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDP 364
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDL 388
A+ +FD + H ++V W AMI G+AQ NG ++AL +F + G KP+
Sbjct: 365 ARAIFDSLKHRDVVAWTAMIVGYAQ------------NGLISDALVLFRLMIREGPKPNN 412
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
YT +++L++ S L +L+ G+Q+HA+ ++ +S V VG AL+ MY + G I+ A ++F
Sbjct: 413 YTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNH 472
Query: 449 M-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
+ S R ++WTSMI A H L ++A++LFE ML ++P+ +T+VG L+AC++ G+V +
Sbjct: 473 ICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQ 532
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
YF +M+ + I+P HY C+ID+ R G +EEA++FI+ M EP+ V W ++ C
Sbjct: 533 GKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSC 592
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H ++L AAE+LL + P + +Y L + + G+WED A V+ +++ + +
Sbjct: 593 RVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQG 652
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EES 682
+SW++IK+KV+ F D LHPQ I+ ++ ++ ++ K G+ + L D +E
Sbjct: 653 FSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQ 712
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
+HSEKLAIAF L+NTP + + ++K+ +C DCH+ I+ I+ L REIIVRD+ R H
Sbjct: 713 ILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFH 772
Query: 743 KFVNGHCTCRDF 754
F +G C+C+D+
Sbjct: 773 HFKDGSCSCQDY 784
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 142/577 (24%), Positives = 258/577 (44%), Gaps = 96/577 (16%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L +++ G ++ ++L C ++L + +H+ +VK G V L+N+Y KC
Sbjct: 134 LRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKC 193
Query: 123 GN-------------------------------MEEAQKVFDNLPRINVVSWTSLISGYV 151
G+ + A +FD + ++VSW S+I+GY
Sbjct: 194 GDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYC 253
Query: 152 QNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
A+ F ML++ + P TLG+ L+AC++ ES++LGKQIHA++V+ +
Sbjct: 254 HQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAG 313
Query: 211 SVGNSLCSLYSTCGS---------------------------------LNSAIKAFNRIR 237
+VGN+L S+Y+ G+ ++ A F+ ++
Sbjct: 314 AVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLK 373
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++V++WT +I +NG L F M+ EG +PN +TL ++ SV ++ SL G Q
Sbjct: 374 HRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQ 433
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMM 356
+H++ I+L S++ V N+++ +Y + G + +A+K+F+ + S+ + +TW +MI AQ
Sbjct: 434 LHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQ-- 491
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G EA+ +F K+ +KPD T+ +L+ C+ + +EQG+ L
Sbjct: 492 ---------HGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKN 542
Query: 417 TGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQAL 474
+ A ++++ + G +E A M +++W S+++ H A
Sbjct: 543 VHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAK 602
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
E +LL + PN ALA +A +E K+ +K I
Sbjct: 603 VAAEKLLL--IDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKN 660
Query: 535 FVRLGCIEEA---------------FDFIKKMDFEPN 556
V + +E+A + IKKM F P+
Sbjct: 661 KVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPD 697
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/683 (33%), Positives = 372/683 (54%), Gaps = 16/683 (2%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ ++ C +++ +HA +V+ G +D F LV++Y K G ++ A +F+ +P
Sbjct: 205 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 264
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+VVSW +LISG V N AI + L M +G P L + L AC+ + LG+Q
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 324
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH +++K + D +G L +Y+ L+ A+K F+ + ++++ W +I C G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 384
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ F + EG+ N TL ++ ++ + QVH+L K+G+ + V N
Sbjct: 385 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 444
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ Y KC + +A ++F+ S +++ +MI LS + G A+ +F
Sbjct: 445 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA-----------LSQCDHGEGAIKLF 493
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++PD + SS+L C+ L A EQG+Q+HA +K F+SD G ALV Y KC
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G IE A F + R ++SW++MI G A H +AL+LF M+ G+ PN +T L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
AC++AG+V EA YF M++ + I +HY C+ID+ R G +++A + + M F+ N
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + R H + ELG AAE+L L+P+ ++ +L + + S+G W +VA V+ L
Sbjct: 674 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 733
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
++ + + SW+ +KDKV++F D HP + EI+ LDEL + GY +
Sbjct: 734 MKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVD 793
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E +HSE+LA+AF LL+TP +PI V K+ +CRDCH K I+++ +R
Sbjct: 794 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSR 853
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EII+RD R H F +G C+C D+
Sbjct: 854 EIIIRDINRFHHFRDGTCSCGDY 876
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 239/480 (49%), Gaps = 18/480 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNS 154
+HA + TG D FV LV +YG G M++A++VFD N VSW L+S YV+N
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKND 181
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
Q AI VF +M+ +G PT + AC+ +I G+Q+HA VV+ E D N
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN 241
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +Y G ++ A F ++ + +V+SW +I C NG + + +M S G+ P
Sbjct: 242 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 301
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N F L+SI C + +G Q+H IK S+ + ++ +Y K +D+A K+F
Sbjct: 302 NVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVF 361
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSS 393
D MSH +L+ WNA+I+G +H G EA SIF L G+ + T ++
Sbjct: 362 DWMSHRDLILWNALISG------------CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAA 409
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L + L A Q+HAL K GF+ D V L++ Y KC + A RVF E S+
Sbjct: 410 VLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGD 469
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YF 512
+I+ TSMIT + A++LF +ML G+ P+ L AC++ + +
Sbjct: 470 IIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++++++ + L+ + + G IE+A + E V WS I G +HG+
Sbjct: 530 HLIKRQFMSDAFAGN--ALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH 586
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 231/455 (50%), Gaps = 28/455 (6%)
Query: 96 IHAHIVKTGSHQDFFVMTF---LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+HA+++K+G F+ + L++ Y KC A++VFD +P VSW+SL++ Y
Sbjct: 26 LHANLLKSG-----FLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N P AI F M G L L + +LG Q+HA + D V
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFV 137
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
N+L ++Y G ++ A + F+ E+N +SW ++ A +N + ++ F +M+ G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
IQP EF + + + C ++ G QVH++ +++GY ++ N+++ +Y+K G VD A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+F+ M ++V+WNA+I+G L+ H+ A+ + ++ SSG+ P+++
Sbjct: 258 VIFEKMPDSDVVSWNALISGCV---------LNGHD--HRAIELLLQMKSSGLVPNVFML 306
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
SSIL C+ A + G QIH +K SD +G LV+MY K ++ A +VF MS
Sbjct: 307 SSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSH 366
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R LI W ++I+G ++ +A +F + G+ N+ T L + ++ + A
Sbjct: 367 RDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTAS---LEAASAT 423
Query: 512 FEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
++ KI + D ++ LID + + C+ +A
Sbjct: 424 RQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 6/297 (2%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EA S+ EG V ++ ++L+ + ++ S +HA K G D V+ L
Sbjct: 386 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 445
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y KC + +A +VF+ ++++ TS+I+ Q E AI +F++ML G P
Sbjct: 446 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L + L AC+SL + GKQ+HA+++K Q D GN+L Y+ CGS+ A AF+
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRV 294
+ E+ V+SW+ +IG ++G + L F +M+ EGI PN T+TS+ C L
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+S+ G + ++ L + G +D+A +L + M N W A++
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 682
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L +G + SLL C + + + +HAH++K D F LV Y KC
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++E+A+ F +LP VVSW+++I G Q+ + A+ +F M++ G P ++T+ + L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 183 TACSSL----ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR- 237
AC+ E+ R + +TE+ S + L G L+ A++ N +
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC---MIDLLGRAGKLDDAMELVNSMPF 670
Query: 238 EKNVMSWTTVIGA 250
+ N W ++GA
Sbjct: 671 QANASVWGALLGA 683
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 39/273 (14%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T S LT + AL G +HA LK+GFL+ + L++ Y KC R A RVF E+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARRVFDEI 63
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF---------------VG 494
+SW+S++T ++N+ L A+Q F M GV N+ V
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVH 123
Query: 495 ALAACSNAG----------MVYEALGYFEMMQK---EYKIKPVMDHYMCLIDMFVRLGCI 541
A+A + G +Y G+ + ++ E + + L+ +V+
Sbjct: 124 AMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQC 183
Query: 542 EEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESYAML 597
+A +M +P E +S + C N++ G ++++ KD + L
Sbjct: 184 GDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANAL 243
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+D++V GR + +V+ EK+ ++D SW
Sbjct: 244 VDMYVKMGRVDIASVIF-----EKMPDSDVVSW 271
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/733 (32%), Positives = 398/733 (54%), Gaps = 24/733 (3%)
Query: 29 KDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRK 88
+D+N VS+ S ++ + S+ V G ++ G + + ++ C +
Sbjct: 163 RDRN-AVSWNGMMSAFVKNDRCSDAVELFG-----EMVWSGVRPNEFGFSCVVNACTGSR 216
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L +HA +V+TG +D F LV++Y K G++ A VF +P+ +VVSW + IS
Sbjct: 217 DLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFIS 276
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL--TACSSLESIRLGKQIHAYVVKYQT 206
G V + + A+ + L M +G P TL + L A + + LG+QIH +++K
Sbjct: 277 GCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACA 336
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D +G +L +Y+ G L+ A K F I K+++ W +I C G + L F +
Sbjct: 337 DSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCR 396
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M EG N TL ++ ++ ++ QVH+L K+G+ S+ V N ++ Y KC
Sbjct: 397 MRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNC 456
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+ A K+F+ S N++ + +MI LS + G +A+ +F ++ G++P
Sbjct: 457 LRYANKVFEEHSSDNIIAFTSMITA-----------LSQCDHGEDAIKLFMEMLRKGLEP 505
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D + SS+L C+ L A EQG+Q+HA +K F++DV G ALV Y KCG IE A F
Sbjct: 506 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAF 565
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+ + ++SW++MI G A H +AL +F M+ + PN +T L AC++AG+V
Sbjct: 566 SGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVD 625
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
EA GYF M++ + I +HY C+ID+ R G +++A + + M FE N +W +A
Sbjct: 626 EAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAA 685
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
R H + ELG AAE+L L+P+ ++ +L + + SAG W++VA V+ L ++ K+ +
Sbjct: 686 SRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEP 745
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-- 684
SW+ +KD+V++F D HP++ +I+ L+EL + GY +L D + +
Sbjct: 746 AMSWVELKDRVHTFIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKE 805
Query: 685 ---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
+HSE+LA+AF L++TP +PI V K+ +CRDCH K I+ + +REII+RD R
Sbjct: 806 LLLSHHSERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRF 865
Query: 742 HKFVNGHCTCRDF 754
H F +G C+C D+
Sbjct: 866 HHFSDGACSCGDY 878
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 225/474 (47%), Gaps = 24/474 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S LL +SL IHAH++K+G F L++ Y KC A++VFD
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGLLHAF--RNHLLSFYSKCRLPGSARRVFDET 63
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P VSW+SL++ Y N+ P A+ F M G L L C+ LG
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP--DAGLGV 120
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR-IREKNVMSWTTVIGACGEN 254
Q+HA V D V N+L ++Y G ++ A + F+ R++N +SW ++ A +N
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ F +M+ G++PNEF + + + C L G +VH++ ++ GY ++
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y K G + A +F + ++V+WNA I+G H AL
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISG-----------CVLHGHDQHALE 289
Query: 375 IFSKLNSSGMKPDLYTFSSIL--TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ ++ SSG+ P+++T SSIL + A G QIH +K SD +G ALV+M
Sbjct: 290 LLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDM 349
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K G ++ A +VF + + L+ W ++I+G ++ ++L LF M G N+ T
Sbjct: 350 YAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTL 409
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
L + ++ + + + + KI + D ++ LID + + C+ A
Sbjct: 410 AAVLKSTASLEAISDTTQVHALAE---KIGFLSDSHVVNGLIDSYWKCNCLRYA 460
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/683 (33%), Positives = 372/683 (54%), Gaps = 16/683 (2%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ ++ C +++ +HA +V+ G +D F LV++Y K G ++ A +F+ +P
Sbjct: 112 FSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMP 171
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+VVSW +LISG V N AI + L M +G P L + L AC+ + LG+Q
Sbjct: 172 DSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQ 231
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH +++K + D +G L +Y+ L+ A+K F+ + ++++ W +I C G
Sbjct: 232 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGR 291
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ F + EG+ N TL ++ ++ + QVH+L K+G+ + V N
Sbjct: 292 HDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG 351
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ Y KC + +A ++F+ S +++ +MI LS + G A+ +F
Sbjct: 352 LIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA-----------LSQCDHGEGAIKLF 400
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++PD + SS+L C+ L A EQG+Q+HA +K F+SD G ALV Y KC
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 460
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G IE A F + R ++SW++MI G A H +AL+LF M+ G+ PN +T L
Sbjct: 461 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
AC++AG+V EA YF M++ + I +HY C+ID+ R G +++A + + M F+ N
Sbjct: 521 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 580
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + R H + ELG AAE+L L+P+ ++ +L + + S+G W +VA V+ L
Sbjct: 581 ASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKL 640
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
++ + + SW+ +KDKV++F D HP + EI+ LDEL + GY +
Sbjct: 641 MKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVD 700
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E +HSE+LA+AF LL+TP +PI V K+ +CRDCH K I+++ +R
Sbjct: 701 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISNIVSR 760
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EII+RD R H F +G C+C D+
Sbjct: 761 EIIIRDINRFHHFRDGTCSCGDY 783
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 239/480 (49%), Gaps = 18/480 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNS 154
+HA + TG D FV LV +YG G M++A++VFD N VSW L+S YV+N
Sbjct: 29 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKND 88
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
Q AI VF +M+ +G PT + AC+ +I G+Q+HA VV+ E D N
Sbjct: 89 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTAN 148
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +Y G ++ A F ++ + +V+SW +I C NG + + +M S G+ P
Sbjct: 149 ALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVP 208
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N F L+SI C + +G Q+H IK S+ + ++ +Y K +D+A K+F
Sbjct: 209 NVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVF 268
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSS 393
D MSH +L+ WNA+I+G +H G EA SIF L G+ + T ++
Sbjct: 269 DWMSHRDLILWNALISG------------CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAA 316
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L + L A Q+HAL K GF+ D V L++ Y KC + A RVF E S+
Sbjct: 317 VLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGD 376
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YF 512
+I+ TSMIT + A++LF +ML G+ P+ L AC++ + +
Sbjct: 377 IIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 436
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++++++ + L+ + + G IE+A + E V WS I G +HG+
Sbjct: 437 HLIKRQFMSDAFAGN--ALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH 493
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 186/356 (52%), Gaps = 17/356 (4%)
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGA 250
+LG Q+HA + D V N+L ++Y G ++ A + F+ E+N +SW ++ A
Sbjct: 24 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+N + ++ F +M+ GIQP EF + + + C ++ G QVH++ +++GY +
Sbjct: 84 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ N+++ +Y+K G VD A +F+ M ++V+WNA+I+G L+ H+
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV---------LNGHD--H 192
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
A+ + ++ SSG+ P+++ SSIL C+ A + G QIH +K SD +G LV
Sbjct: 193 RAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLV 252
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY K ++ A +VF MS R LI W ++I+G ++ +A +F + G+ N+
Sbjct: 253 DMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRT 312
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
T L + ++ + A ++ KI + D ++ LID + + C+ +A
Sbjct: 313 TLAAVLKSTAS---LEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDA 365
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 170/321 (52%), Gaps = 35/321 (10%)
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M +EG+ NEF L V + ++GAQVH++ + G+ S++ V N+++ +Y G
Sbjct: 1 MRAEGVCCNEFALPV---VLKCVPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57
Query: 327 VDEAQKLFD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+D+A+++FD S N V+WN +++ + K+D +A+ +F ++ SG++
Sbjct: 58 MDDARRVFDEAGSERNAVSWNGLMSAY------VKNDQCG-----DAIQVFGEMVWSGIQ 106
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P + FS ++ C+ ++ G Q+HA+ ++ G+ DV ALV+MY K GR++ AS +
Sbjct: 107 PTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVI 166
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F +M ++SW ++I+G + H+A++L M +G+ PN L AC+ AG
Sbjct: 167 FEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA- 225
Query: 506 YEALGYFEMMQKEY----KIKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPN 556
F++ ++ + K D Y+ L+DM+ + +++A FD++ D
Sbjct: 226 ------FDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDL--- 276
Query: 557 EVIWSVFIAGCRRHGNMELGF 577
++W+ I+GC G + F
Sbjct: 277 -ILWNALISGCSHGGRHDEAF 296
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 149/297 (50%), Gaps = 6/297 (2%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EA S+ EG V ++ ++L+ + ++ S +HA K G D V+ L
Sbjct: 293 DEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGL 352
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y KC + +A +VF+ ++++ TS+I+ Q E AI +F++ML G P
Sbjct: 353 IDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 412
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L + L AC+SL + GKQ+HA+++K Q D GN+L Y+ CGS+ A AF+
Sbjct: 413 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 472
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRV 294
+ E+ V+SW+ +IG ++G + L F +M+ EGI PN T+TS+ C L
Sbjct: 473 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 532
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+S+ G + ++ L + G +D+A +L + M N W A++
Sbjct: 533 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLG 589
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 6/182 (3%)
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFA 465
G Q+HA+ + TGF SDV V ALV MY G ++ A RVF E S R +SW +++ +
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ A+Q+F +M+ +G++P + F + AC+ + + M+ + K V
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
L+DM+V++G ++ A +KM + + V W+ I+GC +G+ A E LL+
Sbjct: 146 TAN-ALVDMYVKMGRVDIASVIFEKMP-DSDVVSWNALISGCVLNGH---DHRAIELLLQ 200
Query: 586 LK 587
+K
Sbjct: 201 MK 202
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L +G + SLL C + + + +HAH++K D F LV Y KC
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 460
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++E+A+ F +LP VVSW+++I G Q+ + A+ +F M++ G P ++T+ + L
Sbjct: 461 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 520
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS-LCSLYSTCGSLNSAIKAFNRIR-EKN 240
AC+ + K+ + + D T S + L G L+ A++ N + + N
Sbjct: 521 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 580
Query: 241 VMSWTTVIGA 250
W ++GA
Sbjct: 581 ASVWGALLGA 590
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1005
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/693 (33%), Positives = 386/693 (55%), Gaps = 18/693 (2%)
Query: 69 GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
G ++ S + ++L+ C N +L +I+H+ ++ G D F+ LV++Y KCG
Sbjct: 323 GSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAG 382
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+A KVF + +VVSW+++I+ Q Q A VF M +G P TL + ++A +
Sbjct: 383 DALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAAT 442
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L + G+ IHA V KY E D +V N+L ++Y GS+ + F ++++SW
Sbjct: 443 DLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNA 502
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ +N GLR F++ML+EG PN +T SI C ++ + +G QVH+ +K
Sbjct: 503 LLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS 562
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
N V +++ +Y K +++A+ +F+ + +L W ++AG+AQ
Sbjct: 563 LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQ-----------D 611
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +A+ F ++ G+KP+ +T +S L+ CSR+ L+ G Q+H++ +K G D+ V
Sbjct: 612 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 671
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+ALV+MY KCG +E A VF + +R +SW ++I G++ H +AL+ FE ML G
Sbjct: 672 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 731
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P++VTF+G L+ACS+ G++ E +F + K Y I P ++HY C++D+ R G E
Sbjct: 732 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 791
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI++M N +IW + C+ HGN+E G AA +L +L+P+ +Y +L ++F + G
Sbjct: 792 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGM 851
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W+DV V+ L + + SW+ + +V+ F +DG HP+ EI L +L +K
Sbjct: 852 WDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMS 911
Query: 667 FGYKQQESFEL---TDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY L +D E + YHSE+LA+AF LL+T I + K+ +C DCH+F
Sbjct: 912 VGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDF 971
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K I+ +T +E++VRD H F NG C+C++F
Sbjct: 972 MKSISEITNQELVVRDINCFHHFKNGSCSCQNF 1004
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 178/581 (30%), Positives = 286/581 (49%), Gaps = 38/581 (6%)
Query: 11 ACTLETKSRQPSSSLATLKDKNHTV----SYQRSGSKLIQLN------GNSEPVRSLGFQ 60
+C L+ P+ A +N V +Q++ SKL N GN P ++ +
Sbjct: 56 SCALDAIESNPTGHWAFGDAQNLPVRLQDGFQKTPSKLSSPNRPNSTPGNKIP-ETVEKK 114
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
L K + Y +L+ C ++ L+ + IH ++K+G + D + LVNVY
Sbjct: 115 RIWRGLDFDSKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 174
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG+ A KVF +P +VVSWT+LI+G+V A+++F +M G T T
Sbjct: 175 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYAT 234
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
AL ACS + GKQ+HA +K D VG++L LY+ CG + A + F + ++N
Sbjct: 235 ALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQN 294
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW ++ + G+A + L F +M I ++FTL+++ C +LR G VHS
Sbjct: 295 AVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHS 354
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L I++G + + ++ +Y KCGL +A K+F + ++V+W+A+I
Sbjct: 355 LAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITC--------- 405
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
L EA +F ++ SG+ P+ +T +S+++ + L L GE IHA K GF
Sbjct: 406 --LDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFE 463
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
D V ALV MY K G ++ RVF + R LISW ++++GF ++ L++F M
Sbjct: 464 YDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQM 523
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY----MCLIDMFV 536
L G PN TF+ L +CS+ V LG Q +K +D L+DM+
Sbjct: 524 LAEGFNPNMYTFISILRSCSSLSDV--DLGKQVHAQ---IVKNSLDGNDFVGTALVDMYA 578
Query: 537 RLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ +E+A F+ + K D W+V +AG + G E
Sbjct: 579 KNRFLEDAETIFNRLIKRDL----FAWTVIVAGYAQDGQGE 615
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 201/442 (45%), Gaps = 65/442 (14%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG +++S+L+ C + + + +HA IVK + FV T LV++Y K
Sbjct: 523 MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRF 582
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A+ +F+ L + ++ +WT +++GY Q+ Q E A+ F+ M G P TL ++L+
Sbjct: 583 LEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG 642
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS + ++ G+Q+H+ +K D V ++L +Y+ CG + A F+ + ++ +SW
Sbjct: 643 CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSW 702
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T+I ++G+ + L+ F ML EG P+E T + S C M
Sbjct: 703 NTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHM--------------- 747
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
GL++E +K F+ +S + +T I +A M+D+
Sbjct: 748 --------------------GLIEEGKKHFNSLSKIYGIT--PTIEHYACMVDILGRAGK 785
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ--IHALTLKTGFLSD 422
H E S ++ + ++ + ++L C +E GE+ + L+ S+
Sbjct: 786 FH----EVESFIEEMK---LTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSN 838
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISWTSM---ITGFANHSLSHQAL 474
++ L NM+ G + + V MSTR + SW + + F +H SH +
Sbjct: 839 YIL---LSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKI 895
Query: 475 Q--------LFEDMLLAGVRPN 488
+ L + ++ G PN
Sbjct: 896 REIHLKLQDLHQKLMSVGYTPN 917
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/717 (34%), Positives = 403/717 (56%), Gaps = 29/717 (4%)
Query: 51 SEPVRSLGFQEALS-----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
S VR+ F+EA+ +L + ++ +L+ C ++L + IH + K G
Sbjct: 147 SAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC---QTLVDGRKIHCWVFKLGF 203
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
D FV L+++Y + G + A+ +FD++P ++ SW ++ISG +QN A+ V +
Sbjct: 204 QWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDE 263
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G +VT+ + L C+ L I IH YV+K+ E + V N+L ++Y+ G+
Sbjct: 264 MRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGN 323
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A K F ++ ++V+SW ++I A +N + V FF KM G++P+ TL S++S+
Sbjct: 324 LGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASI 383
Query: 286 CGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
+ VH ++ G+ + + N++M +Y K G++D A K+F+ + ++V+
Sbjct: 384 AAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVS 443
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLV 402
WN +I+G+ Q NG +EA+ ++ + +K + T+ SIL + +
Sbjct: 444 WNTLISGYTQ------------NGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVG 491
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
AL+QG +IH +KT DV VGT L+++Y KCGR+ A +F ++ + + W ++I+
Sbjct: 492 ALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIIS 551
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
H +AL+LF +M GV+P+ VTF+ L+ACS++G+V E +F +MQ EY IK
Sbjct: 552 CHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ-EYGIK 610
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P + HY C++D+ R G +E A+DFIK M P+ IW + CR HGN+ELG +A+++
Sbjct: 611 PSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDR 670
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
L ++ ++ Y +L +I+ + G+WE V V++L RE L +T WS I + +V F
Sbjct: 671 LFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYT 730
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL 697
+ HP+ EI+ L L K K GY SF L D +E HSE+LAIAFG+
Sbjct: 731 GNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGI 790
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++TP S I + K+ +C DCHN K I+ +T REI+VRDSKR H F NG C+C D+
Sbjct: 791 ISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDY 847
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 273/549 (49%), Gaps = 34/549 (6%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + + SL C K+L A+ +HA +V +G Q F+ LVN+Y G++ ++
Sbjct: 73 KNEEIDFNSLFDSCT--KTLL-AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRG 129
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV-TLGTALTACSSLE 189
FD + R +V +W S+IS YV+N AI F +L + + T L AC +L
Sbjct: 130 TFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLV 189
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
G++IH +V K + D V SL +YS G + A F+ + +++ SW +I
Sbjct: 190 D---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMIS 246
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+NG A Q L +M EGI + T+ SI VC + + +H IK G
Sbjct: 247 GLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEF 306
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
L V N+++ +Y K G + +AQK+F M ++V+WN++IA + Q DD
Sbjct: 307 ELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQ-----NDD------P 355
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD-VVVGTA 428
A F K+ +G++PDL T S+ +I ++ + +H ++ G+L + VV+G A
Sbjct: 356 VTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNA 415
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRP 487
+++MY K G I+ A +VF + + ++SW ++I+G+ + L+ +A++++ M ++
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKL 475
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAF 545
NQ T+V LAA ++ G + + + + K +D ++ CLID++ + G + +A
Sbjct: 476 NQGTWVSILAAYAHVGALQQGM---RIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAM 532
Query: 546 DFIKKMDFEPNEVIWSVFIA--GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI--- 600
++ E + V W+ I+ G HG L + Q +KP D ++ LL
Sbjct: 533 CLFYQVPRE-SSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKP-DHVTFISLLSACSH 590
Query: 601 --FVSAGRW 607
V G+W
Sbjct: 591 SGLVDEGKW 599
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/689 (33%), Positives = 388/689 (56%), Gaps = 16/689 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + ++L+ C N K+L ++IH+ I+K G + F+ LV++Y KCG +A
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF + + ++V W++LI+ Q Q E +I +F M P T+ + L+A ++ +
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ G+ IHA V KY E D +V N+L ++Y G ++ K + + +++++SW +
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G + L F ML EG PN +T SI C + + G QVH+ IK N
Sbjct: 491 LHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDN 550
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V +++ +Y KC +++A F+ +S +L TW +I +AQ N G
Sbjct: 551 NFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT-----------NQGE 599
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+AL+ F ++ G+KP+ +T + L+ CS L +LE G+Q+H++ K+G +SD+ VG+ALV
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG +E A +F + R I+W ++I G+A + ++AL F ML G+ P+ V
Sbjct: 660 DMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGV 719
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF G L+ACS+ G+V E +F M +++ I P +DH C++D+ R+G +E DFI+K
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQK 779
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M N +IW + + H N+ LG AA +L +L+P++ SY +L +IF + GRW+DV
Sbjct: 780 MQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDV 839
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V++L + + + SW+ +V++F +D HPQ EI LDEL + Y
Sbjct: 840 KRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYV 899
Query: 671 QQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ + L T+++ +HSE+LA+ F L++T I + K+ +CRDCH+ +K I
Sbjct: 900 PKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHI 959
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+S+T +EI+VRD +R H F NG C+C DF
Sbjct: 960 SSITNQEIVVRDVRRFHHFKNGACSCNDF 988
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 261/529 (49%), Gaps = 29/529 (5%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + Y S+L+EC +++SL A+ IH IVK + D + LVNVY KC A+
Sbjct: 109 KKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARL 168
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
V +P +VVSWT+LI G V +I++F +M G P TL T L ACS +
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMA 228
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ LGKQ+HA K D VG++L LY+ CG + A K F + E+N ++W ++
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG 288
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G+ L+ F M+ ++ NEFTLT++ C +L+ G +HSL IK GY N
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ ++ +Y KCGL +A +F + ++V W+A+I L
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC-----------LDQQGQSE 397
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
E++ +F + P+ YT S+L+ + L+ G+ IHA K GF +DV V ALV
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALV 457
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
MY K G + ++++ M R LISW + ++G + + + L +F ML G PN
Sbjct: 458 TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMY 517
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMC--LIDMFVRLGCIEE--- 543
TF+ L +CS V ++ + IK +D +++C LIDM+ + +E+
Sbjct: 518 TFISILGSCSCLFDV-----HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRR--HGNMELGFYAAEQLLKLKPKD 590
AF+ + D W+V I + G L ++ Q +KP +
Sbjct: 573 AFNRLSVRDL----FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG +++S+L C + +HAHI+K + FV T L+++Y KC
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A F+ L ++ +WT +I+ Y Q +Q E A++ F M + G P TL L+
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSG 626
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CSSL S+ G+Q+H+ V K D VG++L +Y+ CG + A F + ++ ++W
Sbjct: 627 CSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAW 686
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
T+I +NG+ + L F ML EGI P+ T T I S C
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSAC 728
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 6/212 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG K + L C + SL + +H+ + K+G D FV + LV++Y KCG MEE
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ +F+ L R + ++W ++I GY QN Q A+ F ML+ G P VT L+ACS
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EKNVMSW 244
+ GK+ H + +V + C + G + +++ +N + W
Sbjct: 731 QGLVEEGKE-HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
TV+GA + V G + +K+ +QP E
Sbjct: 790 ETVLGASKMHNNLVLGEKAANKLFE--LQPEE 819
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/695 (34%), Positives = 386/695 (55%), Gaps = 23/695 (3%)
Query: 70 PKVQTSSYVSLLQECVNR----KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
PK S V L+ +N KSL +A IH+ +V T +H + L+ +Y KCG++
Sbjct: 89 PKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSI 148
Query: 126 EEAQKVFDNLPR--INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+F+ P NVV+WT+LI+ ++++P A+ F M G YP + T L
Sbjct: 149 HHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILP 208
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ + G+QIHA + K+ +D V +L +Y+ CGS+ A F+ + +N++S
Sbjct: 209 ACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVS 268
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W ++I +N + + F ++LS G P++ +++S+ S C ++ L G QVH +
Sbjct: 269 WNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIV 326
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G + V+NS++ +Y KCGL ++A KLF G ++VTWN MI G + +
Sbjct: 327 KRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFE---- 382
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+A + F + G++PD ++SS+ + + AL QG IH+ LKTG + +
Sbjct: 383 -------QACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNS 435
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+ ++LV MY KCG + A +VF E ++ WT+MIT F H +++A++LFE+ML
Sbjct: 436 RISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNE 495
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GV P +TFV L+ACS+ G + + YF M + IKP ++HY C++D+ R+G +EE
Sbjct: 496 GVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEE 555
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A FI+ M FEP+ ++W + C +H N+E+G AE+L KL+P + +Y +L +I++
Sbjct: 556 ACRFIESMPFEPDSLVWGALLGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIR 615
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
G E+ V+ L + + SWI +K++ + F ND H ++ EI+ +L +L E
Sbjct: 616 HGMLEEADEVRRLMGINGVRKESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKEL 675
Query: 664 AKCFGYKQQESFELT----DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY + F EE + HSEKLA+AFGLL P SP+ + K+ C DCH
Sbjct: 676 IKRRGYVAETQFATNSVEGSEEQSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCH 735
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K + + REIIVRD R H+F NG C+C D+
Sbjct: 736 TVMKFASEIFQREIIVRDINRFHRFTNGSCSCMDY 770
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 172/394 (43%), Gaps = 55/394 (13%)
Query: 55 RSLG-FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
R++G F+E LS+ GP S S+L C L + +H IVK G +V
Sbjct: 284 RAIGVFREVLSL---GP--DQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKN 338
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
LV++Y KCG E+A K+F +VV+W +I G + E A F M+ G P
Sbjct: 339 SLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEP 398
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ + A +S+ ++ G IH++V+K ++ + +SL ++Y CGS+ A + F
Sbjct: 399 DEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVF 458
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+E NV+ WT +I ++G A + ++ F +ML+EG+ P T S+ S C
Sbjct: 459 RETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACS------ 512
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G +D+ K F+ M++V+ + + +A
Sbjct: 513 -----------------------------HTGKIDDGFKYFNSMANVHNI--KPGLEHYA 541
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
M+DL G E F + S +PD + ++L C + +E G ++
Sbjct: 542 CMVDLL-----GRVGRLEEACRF--IESMPFEPDSLVWGALLGACGKHANVEMGREVAER 594
Query: 414 TLKTGFLSDVVVGTALV--NMYKKCGRIERASRV 445
K L G ++ N+Y + G +E A V
Sbjct: 595 LFK---LEPDNPGNYMLLSNIYIRHGMLEEADEV 625
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 230/656 (35%), Positives = 381/656 (58%), Gaps = 30/656 (4%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D V + L+++ + G++ A+KVFD L VV WT LIS YVQ E A+ +FLD L
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG--- 224
E G P T+ + ++AC+ L S+RLG Q+H+ ++ D V L +Y+
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENG-EAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
+++ A K F R+ + +V+SWT +I ++G + + + F +ML+E I+PN T +SI
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C ++ G QVH+ IK AS V N+++ +Y + G ++EA+++F N +
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVF------NQL 420
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+MI + D D + + ++SS TF+S+++ + +
Sbjct: 421 YERSMIPCITEGRDFPLDH--------RIVRMDVGISSS-------TFASLISAAASVGM 465
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L +G+Q+HA++LK GF SD V +LV+MY +CG +E A R F E+ R +ISWTSMI+G
Sbjct: 466 LTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
A H + +AL LF DM+L GV+PN VT++ L+ACS+ G+V E YF MQ+++ + P
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIP 585
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
M+HY C++D+ R G ++EA +FI +M + + ++W + CR H N+E+G A+ +
Sbjct: 586 RMEHYACMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNV 645
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
++L+P+D Y +L +++ AG W++VA +++ R+ L++ SW+ +++ + F+
Sbjct: 646 VELEPRDPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAG 705
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
D HP++ +I+ LD LV + K GY S L D +E + HSEK+A+AFGL+
Sbjct: 706 DTSHPRAQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLI 765
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
T PI + K+ +C DCH+ IK ++ T REII+RDS R H+ +G C+C ++
Sbjct: 766 TTSAPKPIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEY 821
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 145/509 (28%), Positives = 257/509 (50%), Gaps = 50/509 (9%)
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLD 165
+D V L+ +Y +CG + A+ VFD + + ++VSWT++ S +N ++ + +
Sbjct: 82 RDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGE 141
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT---EDDTSVGNSLCSLYST 222
MLE+G P TL A AC E + + ++ D +VG++L + +
Sbjct: 142 MLESGLLPNAYTLCAAAHACFPHE-LYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLAR 200
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVI-----GACGENGEAVQGLRFFSKMLSEGIQPNEF 277
G L SA K F+ + EK V+ WT +I G C E EAV+ F L +G +P+ +
Sbjct: 201 NGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAE--EAVE---LFLDFLEDGFEPDRY 255
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL---VDEAQKLF 334
T++S+ S C + S+R+G Q+HSL +++G AS+ V ++ +Y K + +D A K+F
Sbjct: 256 TMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVF 315
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFS 392
+ M ++++W A+I+G+ Q +G E +++F ++ + +KP+ T+S
Sbjct: 316 ERMPKNDVISWTALISGYVQ------------SGVQENKVMALFGEMLNESIKPNHITYS 363
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
SIL C+ + + G Q+HA +K+ S VG ALV+MY + G +E A RVF ++ R
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++I IT + L H+ +++ V + TF ++A ++ GM+ +
Sbjct: 424 SMI---PCITEGRDFPLDHRIVRM-------DVGISSSTFASLISAAASVGMLTKGQQLH 473
Query: 513 EMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
M K D ++ L+ M+ R G +E+A ++ + N + W+ I+G +H
Sbjct: 474 AM---SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELK-DRNVISWTSMISGLAKH 529
Query: 571 GNME--LGFYAAEQLLKLKPKDCESYAML 597
G E L + L +KP D A+L
Sbjct: 530 GYAERALSLFHDMILTGVKPNDVTYIAVL 558
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 187/367 (50%), Gaps = 30/367 (8%)
Query: 191 IRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVI 248
+RLG+ +H +++ D D V NSL +LYS CG++ SA F+ +R ++++SWT +
Sbjct: 64 LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT-----MLSLRVGAQVHSLGI 303
NG L +ML G+ PN +TL + + C ++ V VH +G+
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ +++ V ++++ + + G + A+K+FDG+ +V W +I+ + Q
Sbjct: 184 ---WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQ--------- 231
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA+ +F G +PD YT SS+++ C+ L ++ G Q+H+L L+ G SD
Sbjct: 232 --GECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDA 289
Query: 424 VVGTALVNMYKKCG---RIERASRVFVEMSTRTLISWTSMITGFANHSLS-HQALQLFED 479
V LV+MY K ++ A++VF M +ISWT++I+G+ + ++ + LF +
Sbjct: 290 CVSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGE 349
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVR 537
ML ++PN +T+ L +C++ + + ++ K H + L+ M+
Sbjct: 350 MLNESIKPNHITYSSILKSCAS---ISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAE 406
Query: 538 LGCIEEA 544
GC+EEA
Sbjct: 407 SGCMEEA 413
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 164/339 (48%), Gaps = 16/339 (4%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
KN +S+ S +Q V +L F E +L E K +Y S+L+ C +
Sbjct: 320 KNDVISWTALISGYVQSGVQENKVMAL-FGE---MLNESIKPNHITYSSILKSCASISDH 375
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ +HAH++K+ V LV++Y + G MEEA++VF+ L S+I
Sbjct: 376 DSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE------RSMIPCI 429
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
+ L H + M + G ++ T + ++A +S+ + G+Q+HA +K D
Sbjct: 430 TEGRDFPLD-HRIVRM-DVG--ISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDR 485
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
V NSL S+YS CG L A ++FN ++++NV+SWT++I ++G A + L F M+
Sbjct: 486 FVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILT 545
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
G++PN+ T ++ S C + +R G + S+ G + ++ L + G+V E
Sbjct: 546 GVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKE 605
Query: 330 AQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
A + + M + + W ++ ++ +++A N
Sbjct: 606 ALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKN 644
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/665 (34%), Positives = 386/665 (58%), Gaps = 17/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H VK+G D V LVN+Y K G A++VF+++ ++++SW S+IS Q+S
Sbjct: 926 VHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSL 985
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGN 214
E ++++F+D+L G P + TL + L ACSSL + + + +QIH + +K D+ V
Sbjct: 986 EEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVAT 1045
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +YS G + A F + ++ W ++ + + L FS + G +
Sbjct: 1046 TLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKS 1105
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
++ TL + + CG ++ L G Q+H+ IK G+ S+L V + I+ +Y+KCG + A +F
Sbjct: 1106 DQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVF 1165
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ +S + V W +MI+G +D +D +AL I+ ++ S + PD YTF+++
Sbjct: 1166 NYISAPDDVAWTSMISG---CVDNGNED--------QALRIYHRMRQSRVMPDEYTFATL 1214
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ S + ALEQG Q+HA +K +SD VGT+LV+MY KCG IE A R+F +M+ R +
Sbjct: 1215 IKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNI 1274
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
W +M+ G A H + +A+ LF+ M G+ P++V+F+G L+ACS+AG+ EA Y
Sbjct: 1275 ALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHS 1334
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M +Y I+P ++HY CL+D R G ++EA I+ M F+ + I + CR G++E
Sbjct: 1335 MPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVE 1394
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
G A +L L+P D +Y +L +I+ +A RW+DV + + + + + + +SWI +K
Sbjct: 1395 TGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVK 1454
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
+ ++ F +D HPQ+ I+ ++E+++ + GY F L D +E + YHSE
Sbjct: 1455 NMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSE 1514
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIA+GL++TP + I V+K+ +C DCHN IK I+ + REI++RD+ R H F +G C
Sbjct: 1515 KLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVC 1574
Query: 750 TCRDF 754
+C D+
Sbjct: 1575 SCGDY 1579
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 227/491 (46%), Gaps = 62/491 (12%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ ++ +L + HA IV +GS D F+ L+ +Y KCG++ A++VFD P +
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 140 VVSWTSLISGYV-----QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+V+W +++ Y + + +H+F + + T +TL L C + +
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ +H Y +K E D V +L ++YS CG + A F+ +RE++V+ W ++ +
Sbjct: 747 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFT----LTSISSVC---GTMLSLRVGAQVHSLGIKLGY 307
G + + FS+ G++P+EF+ L +S V G L+ +V A Y
Sbjct: 807 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQA----------Y 856
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
A+ K L D+ +F WN L++ + N
Sbjct: 857 AA-------------KLSLSDDNPDVF---------CWNK---------KLSECLWAGDN 885
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G A+ F +N + D T +L + LE G+Q+H + +K+G SDV V
Sbjct: 886 WG--AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVAN 943
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+LVNMY K G A VF +M LISW SMI+ A SL +++ LF D+L G++P
Sbjct: 944 SLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKP 1003
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQ-KEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
+ T L ACS+ + + L + K + D ++ LID++ + G +EEA
Sbjct: 1004 DHFTLASVLRACSS---LIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEA 1060
Query: 545 -FDFIKKMDFE 554
F F K D +
Sbjct: 1061 EFLFQNKDDLD 1071
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 127/249 (51%), Gaps = 1/249 (0%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + IHAH +K G D V + ++++Y KCG+M A VF+ + + V+WTS+ISG
Sbjct: 1123 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 1182
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
V N + A+ ++ M ++ P T T + A S + ++ G+Q+HA V+K D
Sbjct: 1183 CVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD 1242
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
VG SL +Y+ CG++ A + F ++ +N+ W ++ ++G A + + F M S
Sbjct: 1243 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 1302
Query: 270 EGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
GI+P+ + I S C L+ +HS+ G + + ++ + GLV
Sbjct: 1303 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 1362
Query: 329 EAQKLFDGM 337
EA K+ + M
Sbjct: 1363 EADKVIETM 1371
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/691 (36%), Positives = 384/691 (55%), Gaps = 24/691 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG--KCGNMEEA 128
++Q + L++C ++S + IHA +++T D F + +V G++ A
Sbjct: 37 QIQLHPCLLSLEKCT---TMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYA 93
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ VF+ +P + S+I GY + P AI + M+ G P T + +C L
Sbjct: 94 RLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL 153
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
GKQ+H + K D + N+L ++YS CG L SA K F+++ K+V+SW T+I
Sbjct: 154 CE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 210
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
GA + + ++ F +M ++PNE TL ++ + C L QVH + G
Sbjct: 211 GAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIG 270
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ + +++M +Y KCG A+ LF+ M NL WN MI GH + D
Sbjct: 271 FHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDY---------- 320
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EALS+F+++ SG+K D T +S+L C+ L ALE G+ +H K DV +GTA
Sbjct: 321 -EEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTA 379
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG IE A RVF EM + +++WT++I G A +AL+LF +M ++ V+P+
Sbjct: 380 LVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPD 439
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+TFVG LAACS+AG+V E + YF M +Y I+P ++HY C++DM R G I EA D I
Sbjct: 440 AITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLI 499
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M P+ + ++ CR HGN+ + AA+QL++L PK+ +Y +L +I+ S WE
Sbjct: 500 QNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWE 559
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
++ L E + + S I + V+ F D HPQS+EI++ LD+++ + K G
Sbjct: 560 AAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAG 619
Query: 669 YKQQES---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y +S F++ ++E + HSEKLAIAFGLL+T +PI VVK+ +C DCH+ +K
Sbjct: 620 YVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMK 679
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ + REIIVRD R H F G C+CRDF
Sbjct: 680 FISEVYNREIIVRDRNRFHHFTKGSCSCRDF 710
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 45 IQLNGNSEPVRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
I +NG+ V ++EALS+ E G K + SLL C + +L + +H +I
Sbjct: 309 IMINGH---VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 365
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
K D + T LV++Y KCG++E A +VF +P +V++WT+LI G Q A+
Sbjct: 366 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKAL 425
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACS 186
+F +M + P +T L ACS
Sbjct: 426 ELFHEMQMSEVKPDAITFVGVLAACS 451
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 235/706 (33%), Positives = 394/706 (55%), Gaps = 21/706 (2%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA + + G + ++V+LL C + + + I+K G V
Sbjct: 130 FKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNT 189
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y K ++ A ++F +P I+ VS+ ++I+GY ++ E A+++F++M +G PT
Sbjct: 190 LVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPT 249
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L A L+ I LG+QIH++V+K + V N+L YS S+ A K F+
Sbjct: 250 EFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 309
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E++ +S+ +I +G+ F ++ +F ++ S+ L +
Sbjct: 310 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 369
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ I S + V NS++ +Y KCG +EA+ +F ++H + V W AMI+ + Q
Sbjct: 370 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQ 429
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
E L +F+K+ + + D TF+S+L + + +L G+Q+H+
Sbjct: 430 -----------KGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 478
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+GF+S+V G+AL+++Y KCG I+ A + F EM R ++SW +MI+ +A + + L
Sbjct: 479 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 538
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+ F++M+L+G++P+ V+F+G L+ACS++G+V E L +F M + YK+ P +HY ++DM
Sbjct: 539 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDM 598
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCES 593
R G EA + +M +P+E++WS + CR H N EL AA+QL ++ +D
Sbjct: 599 LCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAP 658
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y + +I+ +AG+WE+V+ V R+ + + +SW+ IK + + F ND HPQ EI
Sbjct: 659 YVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEI 718
Query: 654 FKVLDELVEKAKCFGYKQQESFELTDEE-----SASVYHSEKLAIAFGLLNTPIVSPILV 708
K +D L + + GYK S L +E+ + YHSE+LAIAF L++TP SPILV
Sbjct: 719 RKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILV 778
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+ C DCH IK+I+ + REI VRDS R H F +G C+C DF
Sbjct: 779 MKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDF 824
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 263/558 (47%), Gaps = 51/558 (9%)
Query: 90 LSNAEIIHA-HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L N E+ A + + H++ +++ Y K GN+ EA+K+FD + V+WT LI
Sbjct: 63 LKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIG 122
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
GY Q +Q + A +F+ M G P VT T L+ C+ E Q+ ++K +
Sbjct: 123 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDS 182
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
VGN+L Y L+ A + F + E + +S+ +I ++G + + F +M
Sbjct: 183 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQ 242
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+ G++P EFT ++ + + +G Q+HS IK + N+ V N+++ Y K V
Sbjct: 243 NSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 302
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPD 387
+A+KLFD M + V++N +I+G+A +G + A +F +L +
Sbjct: 303 DARKLFDEMPEQDGVSYNVIISGYAW------------DGKHKYAFDLFRELQFTAFDRK 350
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ F+++L+I S + E G QIHA T+ T S+++VG +LV+MY KCG+ E A +F
Sbjct: 351 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 410
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM--- 504
++ R+ + WT+MI+ + + LQLF M A V +Q TF L A ++
Sbjct: 411 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 470
Query: 505 -------------------------VYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVR 537
VY G + + ++ P + + +I + +
Sbjct: 471 GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 530
Query: 538 LGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDC 591
G E K+M +P+ V + ++ C G +E G F + Q+ KL P+
Sbjct: 531 NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRR- 589
Query: 592 ESYAMLLDIFVSAGRWED 609
E YA ++D+ +GR+ +
Sbjct: 590 EHYASVVDMLCRSGRFNE 607
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 186/432 (43%), Gaps = 58/432 (13%)
Query: 186 SSLESIRLG----KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
SSL+S +L I A +VK + DTS N + G L+ A + F ++ KN
Sbjct: 24 SSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNT 83
Query: 242 MS-------------------------------WTTVIGACGENGEAVQGLRFFSKMLSE 270
+S WT +IG + + + F +M
Sbjct: 84 VSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRC 143
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G +P+ T ++ S C QV + IKLGY S L V N+++ Y K +D A
Sbjct: 144 GTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLA 203
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+LF M ++ V++NAMI G+ +KD L +A+++F ++ +SG+KP +T
Sbjct: 204 CQLFKEMPEIDSVSYNAMITGY------SKDGLD-----EKAVNLFVEMQNSGLKPTEFT 252
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
F+++L L + G+QIH+ +KT F+ +V V AL++ Y K + A ++F EM
Sbjct: 253 FAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 312
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA-----GMV 505
+ +S+ +I+G+A A LF ++ Q F L+ SN G
Sbjct: 313 EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQ 372
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
A E + L+DM+ + G EEA + I + V W+ I+
Sbjct: 373 IHAQTIVTTADSEILVGN------SLVDMYAKCGKFEEA-EMIFTNLTHRSAVPWTAMIS 425
Query: 566 GCRRHGNMELGF 577
+ G E G
Sbjct: 426 AYVQKGFYEEGL 437
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 39/366 (10%)
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-----ASNLRVRNSIMYLYLKCGL 326
++ N T SS+ L L V + + +K G+ SN RV N +LK G
Sbjct: 13 MKKNVSTFLKSSSLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGN-----FLKNGE 67
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK--------------------DDLSAH 366
+ +A++LF+ M H N V+ N MI+G+ + +L + S
Sbjct: 68 LSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQL 127
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
N EA +F ++ G +PD TF ++L+ C+ Q Q+ +K G+ S ++VG
Sbjct: 128 NQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVG 187
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
LV+ Y K R++ A ++F EM +S+ +MITG++ L +A+ LF +M +G++
Sbjct: 188 NTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLK 247
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA 544
P + TF L C+N G+ LG ++ K V + ++ L+D + + + +A
Sbjct: 248 PTEFTFAAVL--CANIGLDDIVLGQ-QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDA 304
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF--YAAEQLLKLKPKDCESYAMLLDIFV 602
+M E + V ++V I+G G + F + Q K +A +L I
Sbjct: 305 RKLFDEMP-EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQF-PFATMLSIAS 362
Query: 603 SAGRWE 608
+ WE
Sbjct: 363 NTLDWE 368
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/682 (34%), Positives = 381/682 (55%), Gaps = 17/682 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL +S++ +H H+VK G V L++ Y K ++ A +F ++
Sbjct: 144 TLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEK 203
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ V++ +L++GY + AI++F M + G P+ T LTA ++ I G+Q+H
Sbjct: 204 DNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVH 263
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++VVK + V N+L YS + A K F + E + +S+ +I C NG
Sbjct: 264 SFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVE 323
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F ++ +F ++ S+ L+L +G Q+HS I S + V NS++
Sbjct: 324 ESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLV 383
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC EA ++F ++H + V W A+I+G+ Q H G L +F +
Sbjct: 384 DMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQK--------GLHEDG---LKLFVE 432
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ + + D T++SIL C+ L +L G+Q+H+ +++G LS+V G+ALV+MY KCG
Sbjct: 433 MHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGS 492
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
I+ A ++F EM R +SW ++I+ +A + AL+ FE M+ +G++PN V+F+ L A
Sbjct: 493 IKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCA 552
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E L YF M + YK++P +HY ++DM R G +EA + +M FEP+E+
Sbjct: 553 CSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEI 612
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+WS + CR H N EL AA+QL +K +D Y + +I+ +AG W+ V VK
Sbjct: 613 MWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKAL 672
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
RE + + +SW+ IK K + F ND HPQ+ EI + LDEL ++ + GYK + L
Sbjct: 673 RERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCAL 732
Query: 678 --TDEE---SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
DEE + YHSE++AIAF L++TP SPILV+K+ C DCH IK+I+ + RE
Sbjct: 733 HNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKVISKIVNRE 792
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
I VRDS R H F +G C+C+D+
Sbjct: 793 ITVRDSSRFHHFTDGSCSCKDY 814
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 285/602 (47%), Gaps = 67/602 (11%)
Query: 51 SEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNA-----EIIHAHIVKTGS 105
+ P R +A S++ G T + +Q + R L A E+ H +++ T +
Sbjct: 20 TSPKRHFQHVDA-SMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNT 78
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+M +L K GN+ A+ +FD++ + +VV+WT LI GY Q+++ A ++F D
Sbjct: 79 ----MIMGYL-----KSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFAD 129
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G P ++TL T L+ + ES+ Q+H +VVK + V NSL Y S
Sbjct: 130 MCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A F + EK+ +++ ++ + G + F KM G +P+EFT ++ +
Sbjct: 190 LGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTA 249
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
M + G QVHS +K + N+ V N+++ Y K + EA+KLF M V+ +++
Sbjct: 250 GIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISY 309
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
N +I A NG E+L +F +L + + F+++L+I + + L
Sbjct: 310 NVLIT------------CCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNL 357
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
E G QIH+ + T +S+V+VG +LV+MY KC + A+R+F +++ ++ + WT++I+G+
Sbjct: 358 EMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGY 417
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
L L+LF +M A + + T+ L AC+N + + + + V
Sbjct: 418 VQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNV 477
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMD-------------------------------- 552
L+DM+ + G I+EA ++M
Sbjct: 478 FSG-SALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIH 536
Query: 553 --FEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
+PN V + + C G +E G F + Q+ KL+P+ E YA ++D+ +GR+
Sbjct: 537 SGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRR-EHYASMVDMLCRSGRF 595
Query: 608 ED 609
++
Sbjct: 596 DE 597
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 216/452 (47%), Gaps = 16/452 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ ++L + + + +H+ +VK + FV L++ Y K + EA+K+F +
Sbjct: 242 TFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEM 301
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++ +S+ LI+ N + E ++ +F ++ T L+ ++ ++ +G+
Sbjct: 302 PEVDGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGR 361
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIH+ + + VGNSL +Y+ C A + F + ++ + WT +I + G
Sbjct: 362 QIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKG 421
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
GL+ F +M I + T SI C + SL +G Q+HS I+ G SN+ +
Sbjct: 422 LHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGS 481
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG + EA ++F M N V+WNA+I+ +AQ D G AL
Sbjct: 482 ALVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGD-----------GGHALRS 530
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYK 434
F ++ SG++P+ +F SIL CS +E+G Q +++T ++V+M
Sbjct: 531 FEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLC 590
Query: 435 KCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTF 492
+ GR + A ++ M I W+S++ H A++ + + + G+R + +
Sbjct: 591 RSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLR-DAAPY 649
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
V + AG ++++G + +E I+ V
Sbjct: 650 VSMSNIYAAAGE-WDSVGKVKKALRERGIRKV 680
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 97/180 (53%), Gaps = 2/180 (1%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
+++Y S+L+ C N SL+ + +H+ I+++G + F + LV++Y KCG+++EA ++F
Sbjct: 442 SATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQ 501
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+P N VSW +LIS Y QN A+ F M+ +G P +V+ + L ACS +
Sbjct: 502 EMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEE 561
Query: 194 GKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
G Q + + Y+ E S+ + G + A K R+ E + + W++++ +C
Sbjct: 562 GLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSC 621
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/744 (34%), Positives = 405/744 (54%), Gaps = 61/744 (8%)
Query: 53 PVRSLGFQEALSVLTEGPK---VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
P +L FQ T P +Q ++LL C KS N + IH+ I+KTG H
Sbjct: 13 PPPTLHFQP-----TSDPPYKLLQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQ 64
Query: 110 FVMTFLVN--VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
F ++ L+ GN+ A +F+++ + N W ++I G +S P AI ++ ML
Sbjct: 65 FALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRML 124
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL- 226
G P + T L +C+ + + + GKQIH +V+K E D V SL ++Y+ G L
Sbjct: 125 LCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELG 184
Query: 227 ------------------------------NSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+ A + F I ++ +SW +I ++G
Sbjct: 185 YAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR 244
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L FF +M + PNE T+ ++ S C SL +G V S G SNLR+ N+
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG +D+A+ LF+G+ ++++WN MI G++ M N EAL++F
Sbjct: 305 LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM-----------NSYKEALALF 353
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKK 435
K+ S ++P+ TF SIL C+ L AL+ G+ IHA K L++ + T+L++MY K
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG IE A +VF M ++L SW +MI+G A H ++ AL+LF M G P+ +TFVG
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L+ACS+AG+V F M ++Y I P + HY C+ID+ R G +EA +K M+ +P
Sbjct: 474 LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP 533
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ IW + CR HGN+ELG +AA+ L +L+P++ +Y +L +I+ +AGRW+DVA ++
Sbjct: 534 DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE---LVEKAKCFGYKQQ 672
++ + + S I + V+ F D +H QS +I+K+LDE L+EKA +
Sbjct: 594 KLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSE 653
Query: 673 ESFELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
+++ +E E + +HSEKLAIAFGL++T + I +VK+ +C +CH+ IK+I+ +
Sbjct: 654 VLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIKLISKIFN 713
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REII RD R H F +G C+C D+
Sbjct: 714 REIIARDRNRFHHFKDGSCSCMDY 737
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 186/392 (47%), Gaps = 45/392 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S PV ++ F + +L G + + ++ LL+ C + + IH H++K G D
Sbjct: 110 SSSPVGAIDFY--VRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS--------------------- 148
FV T L+N+Y + G + A+ VF + VS+T+LI+
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 149 ----------GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
GY Q+ + E A+ F +M A P T+ T L+AC+ S+ LG +
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L +YS CG L+ A F I EK+++SW +IG
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS-LGIKLGYASNLRVRNSI 317
+ L F KM ++PN+ T SI C + +L +G +H+ + K +N + S+
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y KCG ++ A+++F GM +L +WNAMI+G L+ H AL +F
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG-----------LAMHGHANMALELFR 456
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
++ G +PD TF +L+ CS +E G Q
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQ 488
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 249/710 (35%), Positives = 386/710 (54%), Gaps = 21/710 (2%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA + E G S +LL S++ +H+H++K G V
Sbjct: 179 FREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNS 238
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++ Y K ++ A ++F+++P + V++ +L++GY + AI++F M E G PT
Sbjct: 239 LLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPT 298
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T LTA L+ I G+Q+H +VVK + V N+L YS + A K F
Sbjct: 299 EFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFY 358
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E + +S+ ++ NG + L F ++ G F ++ S+ L+L +
Sbjct: 359 EMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDI 418
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+HS I S + V NS++ +Y KCG EA ++F ++ + V W AMI+ + Q
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
H G L +F ++ + + D T++SI+ C+ L +L G+Q+H+
Sbjct: 479 K--------GLHEDG---LKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHI 527
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ +G++S+V G+ALV+MY KCG I+ A ++F EM R +SW ++I+ +A + L
Sbjct: 528 IGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTL 587
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LFE+M+ +G++P+ V+ + L ACS+ G+V E L YF+ M + YK+ P +HY IDM
Sbjct: 588 RLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDM 647
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCES 593
R G +EA + +M FEP+E++WS + C H N EL AA QL +K +D
Sbjct: 648 LCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAP 707
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y + +I+ +AG W++V VK RE + + +SW+ IK K + F ND HPQ EI
Sbjct: 708 YVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREI 767
Query: 654 FKVLDELVEKAKCFGYKQQESFEL--TDEE---SASVYHSEKLAIAFGLLNTPIVSPILV 708
K LDEL EK GYK S L DEE + YHSE++AIAF L++TP SPILV
Sbjct: 768 MKKLDELEEKMVKKGYKPDSSCALHNVDEEVKVESLKYHSERIAIAFALISTPEGSPILV 827
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFGVSF 758
+K+ C DCH IK+I+ + REI VRDS R H F +G CTCRD+ V +
Sbjct: 828 MKNLRACTDCHAAIKVISKIVRREITVRDSSRFHHFRDGFCTCRDYWVQY 877
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 269/535 (50%), Gaps = 35/535 (6%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S++ G T L++ + R L+ A + + H++ F ++ Y K G
Sbjct: 91 SIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEM----PHKNIFSTNTMIMGYIKSG 146
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
N+ EA+ +FD++ + V+WT LI GY QN+Q A +F++M G P +V+L T L+
Sbjct: 147 NLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLS 206
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+ +S+ +Q+H++V+K + V NSL Y SL A + FN I E++ ++
Sbjct: 207 GFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT 266
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ ++ + G + + F KM G +P EFT +I + + + G QVH +
Sbjct: 267 FNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVV 326
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K + N+ V N+++ Y K V EA KLF M V+ +++N ++ +A
Sbjct: 327 KCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAW--------- 377
Query: 364 SAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
NG E+L +F +L +G + F+++L+I + + L+ G QIH+ T+ T +S+
Sbjct: 378 ---NGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISE 434
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
++VG +LV+MY KCG A+R+F +++ ++ + WT+MI+ + L L+LF +M
Sbjct: 435 ILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQR 494
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-------CLIDMF 535
A + + T+ + AC A + LG K+ + Y+ L+DM+
Sbjct: 495 AKIGADAATYASIVRAC--ASLASLTLG------KQLHSHIIGSGYISNVFSGSALVDMY 546
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
+ G I++A ++M N V W+ I+ ++G+ + E++++ L+P
Sbjct: 547 AKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQP 600
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/727 (33%), Positives = 393/727 (54%), Gaps = 56/727 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ-- 129
+Q ++ +LL+ C+ ++ L + +HA K+ ++ +Y KCG++ AQ
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 130 -----------------------------KVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+VFD +P+ ++VS+ +LI+ Y + A+
Sbjct: 67 FDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPAL 126
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F ++ E TL + AC + + L +Q+H +VV + SV N++ + Y
Sbjct: 127 RLFAEVRELRFGLDGFTLSGVIIACG--DDVGLVRQLHCFVVVCGYDCYASVNNAVLACY 184
Query: 221 STCGSLNSAIKAFNRIRE---KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
S G LN A + F + E ++ +SW +I ACG++ E ++ + F +M+ G++ + F
Sbjct: 185 SRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMF 244
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC-GLVDEAQKLFDG 336
T+ S+ + + L G Q H + IK G+ N V + ++ LY KC G + E +K+F+
Sbjct: 245 TMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEE 304
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
++ +LV WN MI+G +Q DL++D + F ++ +G PD +F + +
Sbjct: 305 IAAPDLVLWNTMISGFSQYEDLSED----------GIWCFREMQHNGFHPDDCSFVCVTS 354
Query: 397 ICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
CS L + G+Q+HAL +K+ + V V ALV MY KCG + A RVF M ++
Sbjct: 355 ACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMV 414
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
S SMI G+A H + ++L+LFE ML + PN +TF+ L+AC + G V E YF MM
Sbjct: 415 SLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMM 474
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
++ ++I+P +HY C+ID+ R G ++EA I+ M F P + W+ + CR+HGN+EL
Sbjct: 475 KERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVEL 534
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
AA + L+L+P + Y ML +++ SA RWE+ A VK L RE + + SWI I
Sbjct: 535 AVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDK 594
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--------KQQESFELTDEESASVYH 687
KV+ F D HP EI + E++ K K GY + E E ++E +YH
Sbjct: 595 KVHVFVAEDTSHPMIKEIHVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYH 654
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLA+AFGL++T PILVVK+ +C DCHN IK+I+++T REI VRD+ R H F G
Sbjct: 655 SEKLAVAFGLISTEEWVPILVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEG 714
Query: 748 HCTCRDF 754
HC+C D+
Sbjct: 715 HCSCGDY 721
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC-G 123
++ G KV + S+L K L H ++K+G H + V + L+++Y KC G
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PELAIHVFLDMLEAGNYPTNVTLGTAL 182
M E +KVF+ + ++V W ++ISG+ Q E I F +M G +P + +
Sbjct: 294 GMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVT 353
Query: 183 TACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ACS+L S +GKQ+HA +K + SV N+L ++YS CG+++ A + F+ + E N+
Sbjct: 354 SACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNM 413
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+S ++I ++G V+ LR F ML + I PN T ++ S C
Sbjct: 414 VSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSAC 458
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/673 (34%), Positives = 375/673 (55%), Gaps = 23/673 (3%)
Query: 93 AEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
A +HA ++ G D F LV+ Y + G + +A + FD + +V +W +++SG
Sbjct: 87 AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLC 146
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+N++ A+ +F M+ G VT+ + L C L L +H Y VK+ +D+
Sbjct: 147 RNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELF 206
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V N++ +Y G L K F+ + +++++W ++I + G+ + F M G
Sbjct: 207 VCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSG 266
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEA 330
+ P+ TL S++S + G VH ++ G+ ++ N+I+ +Y K ++ A
Sbjct: 267 VSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAA 326
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS-SGMKPDL 388
Q++FD M + V+WN +I G+ Q NG +EA+ ++ + G+KP
Sbjct: 327 QRMFDSMPVRDAVSWNTLITGYMQ------------NGLASEAIHVYDHMQKHEGLKPIQ 374
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TF S+L S L AL+QG ++HAL++KTG DV VGT ++++Y KCG+++ A +F +
Sbjct: 375 GTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQ 434
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
R+ W ++I+G H +AL LF M G+ P+ VTFV LAACS+AG+V +
Sbjct: 435 TPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQG 494
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+F MMQ Y IKP+ HY C++DMF R G +++AFDFI+ M +P+ IW + CR
Sbjct: 495 RNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACR 554
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
HGN+E+G A++ L +L PK+ Y ++ +++ G+W+ V V++L R + L +T W
Sbjct: 555 IHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGW 614
Query: 629 SWIRIKDKVYSFKPND--GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EE 681
S I +K V F + +HPQ EI + L +L+ K + GY SF L D +E
Sbjct: 615 SSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPDYSFVLQDVEEDEKE 674
Query: 682 SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
HSE+LAIAFG++NTP +P+ + K+ +C DCHN K I+ +T REIIVRDS R
Sbjct: 675 QILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISKITEREIIVRDSNRF 734
Query: 742 HKFVNGHCTCRDF 754
H F +G+C+C DF
Sbjct: 735 HHFKDGYCSCGDF 747
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/736 (33%), Positives = 417/736 (56%), Gaps = 30/736 (4%)
Query: 28 LKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLT----EGPKVQTSSYVSLLQE 83
+ D+N TVS+ LIQ G S+ +R F EA+ + + EG ++ + ++L+
Sbjct: 105 MPDRN-TVSF----VTLIQ--GYSQCLR---FSEAIGLFSRLQGEGHELNPFVFSTVLKL 154
Query: 84 CVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
V+ + +HA + K G D FV T L++ Y CG E A++VFD + ++VSW
Sbjct: 155 LVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSW 214
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
T +++ YV+N E ++ +F M G P N T + L AC LE +GK +H K
Sbjct: 215 TGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFK 274
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
++ VG L LY G ++ A++ F + + +V+ W+ +I ++ ++ + +
Sbjct: 275 TSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEM 334
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F +M + PN+FTL S+ C +++ L++G Q+H +K+G N+ V N++M +Y K
Sbjct: 335 FCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAK 394
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG ++ + +LF + V+WN +I G+ Q G +AL +F +
Sbjct: 395 CGRMENSLQLFSESPNCTDVSWNTVIVGYVQA-----------GNGEKALILFKDMLECQ 443
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
++ T+SS+L C+ + ALE G QIH+L++KT + + VVG AL++MY KCG I+ A
Sbjct: 444 VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDAR 503
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
VF + +SW +MI+G++ H L +AL+ FE ML +P++VTFVG L+ACSNAG
Sbjct: 504 LVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAG 563
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
++ YF+ M +EY I+P +HY C++ + R G +++A + ++ FEP+ ++W
Sbjct: 564 LLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRAL 623
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
++ C H ++ELG +A+++L+++P+D ++ +L +I+ +A RW +VA ++ + + +
Sbjct: 624 LSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIR 683
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES-----FELT 678
+ SWI + +V+ F D HP + I +L+ L KA+ GY S E
Sbjct: 684 KEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDVEDV 743
Query: 679 DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDS 738
D+E HSE+LA+A+GL+ TP +SP+ ++K+ +C DCH IK+I+ + R+II+RD
Sbjct: 744 DKEQRLWVHSERLALAYGLIRTPSISPLRIIKNLRICADCHAAIKLISKIVQRDIIIRDM 803
Query: 739 KRLHKFVNGHCTCRDF 754
R H F G C+C D+
Sbjct: 804 NRFHHFHEGICSCGDY 819
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 254/506 (50%), Gaps = 21/506 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P+ T Y SLLQ C+ + + +H I+K G+ D F L+N Y K ++ +A
Sbjct: 40 PEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAA 99
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
K+FD +P N VS+ +LI GY Q + AI +F + G+ T L S E
Sbjct: 100 KLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAE 159
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+LG +HA V K + D VG +L YS CG A + F+ I K+++SWT ++
Sbjct: 160 WAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVA 219
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
EN + L+ FS+M G +PN FT S+ C + VG VH K Y
Sbjct: 220 CYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE 279
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
L V ++ LY+K G VD+A ++F+ M +++ W+ MIA +AQ
Sbjct: 280 ELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQ-----------SEQS 328
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ +F ++ + P+ +T +S+L C+ LV L+ G QIH +K G +V V AL
Sbjct: 329 EEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNAL 388
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCGR+E + ++F E T +SW ++I G+ +AL LF+DML V+ +
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEA---F 545
VT+ L AC+ + + K Y V+ + LIDM+ + G I++A F
Sbjct: 449 VTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGN--ALIDMYAKCGNIKDARLVF 506
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHG 571
D +++ D +V W+ I+G HG
Sbjct: 507 DMLREHD----QVSWNAMISGYSVHG 528
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
Y + S+L C R G+ +H +K G D+ L+N Y K + A+++F E
Sbjct: 45 YIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDE 104
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M R +S+ ++I G++ +A+ LF + G N F L +A +
Sbjct: 105 MPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAE--WAK 162
Query: 509 LGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLG---CIEEAFDFIKKMDFEPNEVIWSVF 563
LG F + YK+ D ++ LID + G C + FD I+ D V W+
Sbjct: 163 LG-FSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDM----VSWTGM 217
Query: 564 IAGCRRHGNME--LGFYAAEQLLKLKPKD 590
+A + E L ++ +++ KP +
Sbjct: 218 VACYVENECFEESLKLFSRMRIVGFKPNN 246
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/761 (32%), Positives = 397/761 (52%), Gaps = 83/761 (10%)
Query: 66 LTEGPKVQTSSYVSLLQECVN---RKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGK 121
+T + Y ++L R + A +H I+KT F++ L+ Y K
Sbjct: 1 MTHAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAK 60
Query: 122 CGNMEEAQKVFDNLPRINV-------------------------------VSWTSLISGY 150
G + A++VFD +P N+ VS+ +LI+G+
Sbjct: 61 SGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGF 120
Query: 151 VQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
P ++ ++ +L E PT +TL + S+L LG +H V++
Sbjct: 121 SSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAY 180
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---------------------------- 241
VG+ L +Y+ G + A + F + K V
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD 240
Query: 242 ---MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++WTT++ +NG ++ L F +M +EG+ +++T SI + CG + +L G Q+
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI 300
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+ + Y N+ V ++++ +Y KC + A+ +F M+ N+++W AMI G+ Q
Sbjct: 301 HAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQ---- 356
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+ EA+ FS++ G+KPD +T S+++ C+ L +LE+G Q H L L +G
Sbjct: 357 -------NACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 409
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ + V ALV +Y KCG IE A R+F EMS +SWT+++TG+A + + + LFE
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFE 469
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
ML G++P+ VTF+G L+ACS AG+V + YF+ MQK++ I P+ DHY C+ID++ R
Sbjct: 470 KMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRS 529
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +EA +FIK+M P+ W+ ++ CR GNME+G +AAE LL+ P++ SY +L
Sbjct: 530 GRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLC 589
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+ + G+W +VA ++ R+ ++ + SWI+ K+KV+ F +D HP S+ I++ L+
Sbjct: 590 SMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLE 649
Query: 659 ELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
L K GYK S L D A +HSEKLAIAFGL+ P PI +VK+
Sbjct: 650 WLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN K I+ +T R+I+VRD+ R HKF +G C+C DF
Sbjct: 710 VCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDF 750
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 238/474 (50%), Gaps = 55/474 (11%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTE---GPKVQTSSYVSLL 81
A++ +++ VSY + + + P RS+ AL L E P T S + ++
Sbjct: 102 FASMPERD-AVSYN---ALITGFSSTGSPARSVQLYRAL--LREESVRPTRITLSAMIMV 155
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
++ ++L ++ +H +++ G FV + LV++Y K G + +A++VF + VV
Sbjct: 156 ASALSDRALGHS--VHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 142 -------------------------------SWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+WT++++G QN A+ VF M G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
T G+ LTAC +L ++ GKQIHAY+ + ED+ VG++L +YS C S+ A
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F R+ +N++SWT +I G+N + + +R FS+M +GI+P++FTL S+ S C +
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
SL GAQ H L + G + V N+++ LY KCG +++A +LFD MS + V+W A++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQ 409
G+AQ E + +F K+ ++G+KPD TF +L+ CSR +E+G +
Sbjct: 454 GYAQF-----------GKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMIT 462
++ G + T ++++Y + GR + A +M + W ++++
Sbjct: 503 FDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 447 bits (1150), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/683 (33%), Positives = 387/683 (56%), Gaps = 18/683 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C + IH ++K G +D FV L+ +YG+C +E A+ VFD +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSW+++I +N + ++A+ + +M P+ V + + + + ++R+GK +H
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218
Query: 199 AYVVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
AYV++ + V + L +Y+ CG L A + FN + +K V+SWT +I C +
Sbjct: 219 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+G + F +M E I PNE T+ S+ CG +L++G Q+H+ ++ G++ +L + +
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KC + A+ LFD + +++ W AM++ +AQ N +A ++F
Sbjct: 339 LVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQA-----------NCIDQAFNLF 387
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ +SG++P T S+L++C+ AL+ G+ +H+ K D ++ TALV+MY KC
Sbjct: 388 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKC 447
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I A R+F+E +R + W ++ITGFA H +AL +F +M GV+PN +TF+G L
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLL 507
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS+AG+V E FE M + + P ++HY C++D+ R G ++EA + IK M +PN
Sbjct: 508 HACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
++W +A CR H N +LG AA QLL+++P++C ++ +I+ +A RW D A V+
Sbjct: 568 TIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKT 627
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+ + + S I + V+ F D HPQ I ++L E+ K GY S
Sbjct: 628 MKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTV 687
Query: 677 L-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L ++E+A YHSEKLA+AFGL++T +PI +VK+ +C DCH K+++ + R
Sbjct: 688 LLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGR 747
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
IIVRD R H F G+C+C D+
Sbjct: 748 VIIVRDRNRFHHFREGYCSCGDY 770
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 215/422 (50%), Gaps = 21/422 (4%)
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
N + L AC + +LGK+IH +V+K + D VGN+L +Y C + A F+
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ E++V+SW+T+I + N E L +M ++P+E + S+ ++ ++R+
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 295 GAQVHSLGIKLGYASNLRV--RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G +H+ I+ ++ V +++ +Y KCG + A++LF+G++ +V+W AMIAG
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ N E +F ++ + P+ T S++ C AL+ G+Q+HA
Sbjct: 274 IR-----------SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHA 322
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L+ GF + + TALV+MY KC I A +F R ++ WT+M++ +A + Q
Sbjct: 323 YILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQ 382
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMCL 531
A LF+ M +GVRP +VT V L+ C+ AG + + KE ++ +++ L
Sbjct: 383 AFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN--TAL 440
Query: 532 IDMFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
+DM+ + G I A FI+ + + +W+ I G HG E L +A + +KP
Sbjct: 441 VDMYAKCGDINAAGRLFIEAISRDI--CMWNAIITGFAMHGYGEEALDIFAEMERQGVKP 498
Query: 589 KD 590
D
Sbjct: 499 ND 500
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 147/281 (52%), Gaps = 10/281 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ +SL+ EC +L + +HA+I++ G + T LV++YGKC ++ A+ +FD+
Sbjct: 300 TMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDST 359
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+V+ WT+++S Y Q + + A ++F M +G PT VT+ + L+ C+ ++ LGK
Sbjct: 360 QNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGK 419
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+H+Y+ K + E D + +L +Y+ CG +N+A + F +++ W +I +G
Sbjct: 420 WVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHG 479
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-----VHSLGIKLGYASN 310
+ L F++M +G++PN+ T + C + G + VH+ G+
Sbjct: 480 YGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGL----VPQ 535
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ ++ L + GL+DEA ++ M N + W A++A
Sbjct: 536 IEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVA 576
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 159/365 (43%), Gaps = 47/365 (12%)
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
F S+ CG + ++G ++H +K G ++ V N++M +Y +C V+ A+ +FD
Sbjct: 95 FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK 154
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M ++V+W+ MI LS + AL + ++N ++P S++
Sbjct: 155 MMERDVVSWSTMI-----------RSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVN 203
Query: 397 ICSRLVALEQGEQIHALTLKTGFLS--DVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ + + G+ +HA ++ V TAL++MY KCG + A ++F ++ +T+
Sbjct: 204 LFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTV 263
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY-------- 506
+SWT+MI G + + +LF M + PN++T + + C G +
Sbjct: 264 VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAY 323
Query: 507 -----------EALGYFEMMQKEYKI---KPVMDH--------YMCLIDMFVRLGCIEEA 544
A +M K I + + D + ++ + + CI++A
Sbjct: 324 ILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQA 383
Query: 545 FDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK-DCESYAMLLDI 600
F+ +M P +V ++ C G ++LG + + K + + DC L+D+
Sbjct: 384 FNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDM 443
Query: 601 FVSAG 605
+ G
Sbjct: 444 YAKCG 448
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
T G + + VSLL C +L + +H++I K D + T LV++Y KCG++
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A ++F ++ W ++I+G+ + E A+ +F +M G P ++T L ACS
Sbjct: 452 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511
Query: 187 SLESIRLGKQ-----IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-N 240
+ GK+ +H + + Q E + L G L+ A + + K N
Sbjct: 512 HAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCMVDLLGRAGLLDEAHEMIKSMPIKPN 567
Query: 241 VMSWTTVIGAC 251
+ W ++ AC
Sbjct: 568 TIVWGALVAAC 578
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/683 (33%), Positives = 372/683 (54%), Gaps = 16/683 (2%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ ++ C +++ +HA +V+ G +D F LV++Y K G ++ A +F+ +P
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+VVSW +LISG V N AI + L M +G P TL + L ACS + LG+Q
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH +++K + D +G L +Y+ L+ A K F+ + ++++ +I C G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGR 384
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L F ++ EG+ N TL ++ ++ + QVH+L +K+G+ + V N
Sbjct: 385 HDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG 444
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ Y KC + +A ++F+ S +++ +MI LS + G A+ +F
Sbjct: 445 LIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA-----------LSQCDHGEGAIKLF 493
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++PD + SS+L C+ L A EQG+Q+HA +K F+SD G ALV Y KC
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G IE A F + R ++SW++MI G A H +AL+LF M+ G+ PN +T L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
AC++AG+V EA YF M++ + I +HY C+ID+ R G +++A + + M F+ N
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
IW + R H + ELG AAE+L L+P+ ++ +L + + SAG W +VA V+ L
Sbjct: 674 ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKL 733
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
++ + + SWI +KDKV++F D HP + EI+ L EL + G+ +
Sbjct: 734 MKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVD 793
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E +HSE+LA+AF LL+TP +PI V K+ +CRDCH K I+ + +R
Sbjct: 794 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSR 853
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EII+RD R H F +G C+C D+
Sbjct: 854 EIIIRDINRFHHFRDGTCSCGDY 876
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 242/480 (50%), Gaps = 18/480 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNS 154
+HA + TG D FV LV +YG G M++A++VF+ N VSW L+S YV+N
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKND 181
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
Q AI VF +M+ +G PT + AC+ +I G+Q+HA VV+ + D N
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN 241
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +Y G ++ A F ++ + +V+SW +I C NG + + +M G+ P
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N FTL+SI C + +G Q+H IK S+ + ++ +Y K +D+A+K+F
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSS 393
D M H +L+ NA+I+G +H G EALS+F +L G+ + T ++
Sbjct: 362 DWMFHRDLILCNALISG------------CSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L + L A Q+HAL +K GF+ D V L++ Y KC + A+RVF E S+
Sbjct: 410 VLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGD 469
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YF 512
+I+ TSMIT + A++LF +ML G+ P+ L AC++ + +
Sbjct: 470 IIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++++++ + L+ + + G IE+A + E V WS I G +HG+
Sbjct: 530 HLIKRQFMSDAFAGN--ALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH 586
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 229/452 (50%), Gaps = 22/452 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HA ++K+GS F L++ Y KC A++VFD +P VSW+SL++ Y N
Sbjct: 26 LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P AI F M G L L + RLG Q+HA + D V N+
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANA 140
Query: 216 LCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L ++Y G ++ A + FN E+N +SW ++ A +N + ++ F +M+ GIQP
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
EF + + + C ++ G QVH++ +++GY ++ N+++ +Y+K G VD A +F
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ M ++V+WNA+I+G L+ H+ A+ + ++ SG+ P+++T SSI
Sbjct: 261 EKMPDSDVVSWNALISGCV---------LNGHD--HRAIELLLQMKYSGLVPNVFTLSSI 309
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L CS A + G QIH +K SD +G LV+MY K ++ A +VF M R L
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDL 369
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
I ++I+G ++ +AL LF ++ G+ N+ T L + ++ + A ++
Sbjct: 370 ILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTAS---LEAASTTRQV 426
Query: 515 MQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
KI + D ++ LID + + C+ +A
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 15/363 (4%)
Query: 47 LNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
LNG+ L Q S L P V T S S+L+ C + IH ++K +
Sbjct: 280 LNGHDHRAIELLLQMKYSGLV--PNVFTLS--SILKACSGAGAFDLGRQIHGFMIKANAD 335
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
D ++ LV++Y K +++A+KVFD + +++ +LISG + + A+ +F ++
Sbjct: 336 SDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYEL 395
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
+ G TL L + +SLE+ +Q+HA VK D V N L Y C L
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ A + F ++++ T++I A + ++ F +ML +G++P+ F L+S+ + C
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
++ + G QVH+ IK + S+ N+++Y Y KCG +++A+ F + +V+W+
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS 575
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
AMI G AQ H G AL +F ++ G+ P+ T +S+L C+ +++
Sbjct: 576 AMIGGLAQ-----------HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 407 GEQ 409
++
Sbjct: 625 AKR 627
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 6/297 (2%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EALS+ EG V ++ ++L+ + ++ S +HA VK G D V+ L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y KC + +A +VF+ ++++ TS+I+ Q E AI +F++ML G P
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L + L AC+SL + GKQ+HA+++K Q D GN+L Y+ CGS+ A AF+
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRV 294
+ E+ V+SW+ +IG ++G + L F +M+ EGI PN T+TS+ C L
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+S+ G + ++ L + G +D+A +L + M N W A++
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 115/273 (42%), Gaps = 39/273 (14%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T S LT + AL G +HA LK+G L+ L++ Y KC R A RVF E+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRVFDEI 63
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF---------------VG 494
+SW+S++T ++N+ L A+Q F M GV N+ V
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVH 123
Query: 495 ALAACSNAG---MVYEAL----GYFEMMQKEYKIKPVMD------HYMCLIDMFVRLGCI 541
A+A + G V AL G F M ++ D + L+ +V+
Sbjct: 124 AMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQC 183
Query: 542 EEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESYAML 597
+A +M +P E +S + C N+E G ++++ KD + L
Sbjct: 184 GDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANAL 243
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+D+++ GR + +V+ EK+ ++D SW
Sbjct: 244 VDMYMKMGRVDIASVIF-----EKMPDSDVVSW 271
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/693 (33%), Positives = 390/693 (56%), Gaps = 18/693 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + +++ SL+ C + +L + + +HA+ K G + + L+N+Y KC ++E
Sbjct: 366 DGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIET 425
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A F NVV W ++ Y + +F M P T + L C
Sbjct: 426 ALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 485
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + LG+QIH+ ++K + + V + L +Y+ G L++A R K+V+SWTT+
Sbjct: 486 LGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 545
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + + L F +ML GI+ +E LT+ S C + +L+ G Q+H+ G+
Sbjct: 546 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 605
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+S+L +N+++ LY KCG ++EA F+ + + WNA+++G Q S +N
Sbjct: 606 SSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQ---------SGNN 656
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F+++N G+ + +TF S + S ++QG+Q+HA+ KTG+ S+ V
Sbjct: 657 --EEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 714
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
A+++MY KCG I A + F+E+S + +SW +MI ++ H +AL F+ M+ + VRP
Sbjct: 715 AIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRP 774
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N VT VG L+ACS+ G+V + + YFE M EY + P +HY+C++DM R G + A DF
Sbjct: 775 NHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDF 834
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I +M EP+ ++W ++ C H NME+G +AA LL+L+P+D +Y +L +++ +W
Sbjct: 835 ILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKW 894
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ + + +E+ + + SWI +K+ ++SF D HP + EI + +L ++A
Sbjct: 895 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEI 954
Query: 668 GYKQQESFELTDE-----ESASVY-HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY Q+ F L E + +++ HSEKLAI+FGLL+ P PI V+K+ +C DCH++
Sbjct: 955 GYV-QDCFSLLSELQQEQKDPTIFIHSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDW 1013
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK ++ ++ REIIVRD+ R H F G C+C+D+
Sbjct: 1014 IKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1046
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/484 (30%), Positives = 258/484 (53%), Gaps = 19/484 (3%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E IHA I+ G + V L+++Y + G ++ A++VFD L + SW ++ISG +N
Sbjct: 190 EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKN 249
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
AI +F DM G PT + L+AC +ES+ +G+Q+H V+K DT V
Sbjct: 250 ECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 309
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L SLY GSL SA F+ + +++ +++ T+I + G + + F +M +G++
Sbjct: 310 NALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLE 369
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ TL S+ C + +L G Q+H+ KLG+ASN ++ +++ LY KC ++ A
Sbjct: 370 PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNY 429
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F N+V WN M+ + + DL + IF ++ + P+ YT+ S
Sbjct: 430 FLETEVENVVLWNVMLVAYGLLDDL-----------RNSFRIFRQMQIEEIVPNQYTYPS 478
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL C RL LE GEQIH+ +KT F + V + L++MY K G+++ A + + + +
Sbjct: 479 ILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 538
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SWT+MI G+ ++ +AL F ML G+R ++V A++AC AG+ +AL +
Sbjct: 539 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC--AGL--QALKEGQ 594
Query: 514 MMQKEYKIKPV---MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ + + + L+ ++ + G IEEA+ ++ + N + W+ ++G ++
Sbjct: 595 QIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDN-IAWNALVSGFQQS 653
Query: 571 GNME 574
GN E
Sbjct: 654 GNNE 657
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 247/499 (49%), Gaps = 19/499 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+L C +SL E +H ++K G D +V LV++Y G++ A+ +F N+
Sbjct: 273 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNM 332
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ + V++ +LI+G Q E A+ +F M G P + TL + + ACSS ++ G+
Sbjct: 333 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQ 392
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HAY K + + +L +LY+ C + +A+ F +NV+ W ++ A G
Sbjct: 393 QLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLD 452
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ R F +M E I PN++T SI C + L +G Q+HS IK + N V +
Sbjct: 453 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCS 512
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y K G +D A + + ++V+W MIAG+ Q +N +AL+
Sbjct: 513 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-----------YNFDDKALTT 561
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ G++ D ++ ++ C+ L AL++G+QIHA +GF SD+ ALV +Y K
Sbjct: 562 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSK 621
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG IE A F + I+W ++++GF + +AL++F M G+ N TF A
Sbjct: 622 CGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSA 681
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE- 554
+ A S + + ++ K + +I M+ + G I +A KK E
Sbjct: 682 VKAASETANMKQGKQVHAVITKT-GYDSETEVCNAIISMYAKCGSISDA----KKQFLEL 736
Query: 555 --PNEVIWSVFIAGCRRHG 571
NEV W+ I +HG
Sbjct: 737 SMKNEVSWNAMINAYSKHG 755
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/502 (29%), Positives = 244/502 (48%), Gaps = 23/502 (4%)
Query: 70 PKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
P QT + LL+ C+ SL +H+ I+K G + + L++ Y G+++ A
Sbjct: 65 PNHQTLKW--LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
KVFD +P + +W +I S +F M+ P T L AC
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 189 E-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ + +QIHA ++ T V N L LYS G ++ A + F+ + K+ SW +
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +N V+ +R F M GI P + +S+ S C + SL +G Q+H L +KLG+
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+S+ V N+++ LY G + A+ +F MS + VT+N +I G LS
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLING-----------LSQCG 351
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G +A+ +F ++ G++PD T +S++ CS L G+Q+HA T K GF S+ +
Sbjct: 352 YGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEG 411
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+N+Y KC IE A F+E ++ W M+ + + ++F M + + P
Sbjct: 412 ALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP 471
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAF 545
NQ T+ L C G + LG ++ + K ++ Y+C LIDM+ +LG ++ A+
Sbjct: 472 NQYTYPSILKTCIRLGDL--ELGE-QIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAW 528
Query: 546 DFIKKMDFEPNEVI-WSVFIAG 566
D + + F +V+ W+ IAG
Sbjct: 529 DILIR--FAGKDVVSWTTMIAG 548
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 229/476 (48%), Gaps = 53/476 (11%)
Query: 170 GNYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P + TL L C S+ G+++H+ ++K +++ + L Y G L+
Sbjct: 62 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-G 287
A+K F+ + E+ + +W +I + + F +M++E + PNE T + + C G
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ V Q+H+ I G + V N ++ LY + G VD A+++FDG+ + +W A
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G LS + EA+ +F + G+ P Y FSS+L+ C ++ +LE G
Sbjct: 242 MISG-----------LSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 290
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQ+H L LK GF SD V ALV++Y G + A +F MS R +++ ++I G +
Sbjct: 291 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQC 350
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGY------- 511
+A++LF+ M L G+ P+ T + ACS+ G ++ LG+
Sbjct: 351 GYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE 410
Query: 512 ---FEMMQKEYKIKPVMDHYM-------CLID-MFVRLGCIEE---AFDFIKKMDFE--- 554
+ K I+ +++++ L + M V G +++ +F ++M E
Sbjct: 411 GALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 470
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK----LKPKDCESYAMLLDIFVSAGR 606
PN+ + + C R G++ELG Q++K L C ++L+D++ G+
Sbjct: 471 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVC---SVLIDMYAKLGK 523
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 147/305 (48%), Gaps = 2/305 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + + C ++L + IHA +G D LV +Y KCGN
Sbjct: 565 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGN 624
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+EEA F+ + ++W +L+SG+ Q+ E A+ VF M G N T G+A+ A
Sbjct: 625 IEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKA 684
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S +++ GKQ+HA + K + +T V N++ S+Y+ CGS++ A K F + KN +SW
Sbjct: 685 ASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSW 744
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGI 303
+I A ++G + L F +M+ ++PN TL + S C + + G + S+
Sbjct: 745 NAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNT 804
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
+ G A ++ + + GL+ A+ M + + W +++ ++ +
Sbjct: 805 EYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGE 864
Query: 363 LSAHN 367
+AH+
Sbjct: 865 FAAHH 869
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/683 (33%), Positives = 372/683 (54%), Gaps = 16/683 (2%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ ++ C +++ +HA +V+ G +D F LV++Y K G ++ A +F+ +P
Sbjct: 205 FSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMP 264
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+VVSW +LISG V N AI + L M +G P TL + L ACS + LG+Q
Sbjct: 265 DSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQ 324
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH +++K + D +G L +Y+ L+ A K F+ + ++++ +I C G
Sbjct: 325 IHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGR 384
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L F ++ EG+ N TL ++ ++ + QVH+L +K+G+ + V N
Sbjct: 385 HDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNG 444
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ Y KC + +A ++F+ S +++ +MI LS + G A+ +F
Sbjct: 445 LIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA-----------LSQCDHGEGAIKLF 493
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++PD + SS+L C+ L A EQG+Q+HA +K F+SD G ALV Y KC
Sbjct: 494 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 553
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G IE A F + R ++SW++MI G A H +AL+LF M+ G+ PN +T L
Sbjct: 554 GSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVL 613
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
AC++AG+V EA YF M++ + I +HY C+ID+ R G +++A + + M F+ N
Sbjct: 614 CACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQAN 673
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
IW + R H + ELG AAE+L L+P+ ++ +L + + SAG W +VA V+ L
Sbjct: 674 ASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKL 733
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
++ + + SWI +KDKV++F D HP + EI+ L EL + G+ +
Sbjct: 734 MKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPNVDVD 793
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E +HSE+LA+AF LL+TP +PI V K+ +CRDCH K I+ + +R
Sbjct: 794 LHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISKIVSR 853
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EII+RD R H F +G C+C D+
Sbjct: 854 EIIIRDINRFHHFRDGTCSCGDY 876
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 242/480 (50%), Gaps = 18/480 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNS 154
+HA + TG D FV LV +YG G M++A++VF+ N VSW L+S YV+N
Sbjct: 122 VHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKND 181
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
Q AI VF +M+ +G PT + AC+ +I G+Q+HA VV+ + D N
Sbjct: 182 QCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTAN 241
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +Y G ++ A F ++ + +V+SW +I C NG + + +M G+ P
Sbjct: 242 ALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVP 301
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N FTL+SI C + +G Q+H IK S+ + ++ +Y K +D+A+K+F
Sbjct: 302 NVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVF 361
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSS 393
D M H +L+ NA+I+G +H G EALS+F +L G+ + T ++
Sbjct: 362 DWMFHRDLILCNALISG------------CSHGGRHDEALSLFYELRKEGLGVNRTTLAA 409
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L + L A Q+HAL +K GF+ D V L++ Y KC + A+RVF E S+
Sbjct: 410 VLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGD 469
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YF 512
+I+ TSMIT + A++LF +ML G+ P+ L AC++ + +
Sbjct: 470 IIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 529
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++++++ + L+ + + G IE+A + E V WS I G +HG+
Sbjct: 530 HLIKRQFMSDAFAGN--ALVYTYAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH 586
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 228/452 (50%), Gaps = 22/452 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HA ++K+GS F L++ Y KC A++ FD +P VSW+SL++ Y N
Sbjct: 26 LHASLLKSGSLASF--RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGL 83
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P AI F M G L L + RLG Q+HA + D V N+
Sbjct: 84 PRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANA 140
Query: 216 LCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L ++Y G ++ A + FN E+N +SW ++ A +N + ++ F +M+ GIQP
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQP 200
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
EF + + + C ++ G QVH++ +++GY ++ N+++ +Y+K G VD A +F
Sbjct: 201 TEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIF 260
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ M ++V+WNA+I+G L+ H+ A+ + ++ SG+ P+++T SSI
Sbjct: 261 EKMPDSDVVSWNALISGCV---------LNGHD--HRAIELLLQMKYSGLVPNVFTLSSI 309
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L CS A + G QIH +K SD +G LV+MY K ++ A +VF M R L
Sbjct: 310 LKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDL 369
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
I ++I+G ++ +AL LF ++ G+ N+ T L + ++ + A ++
Sbjct: 370 ILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTAS---LEAASTTRQV 426
Query: 515 MQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
KI + D ++ LID + + C+ +A
Sbjct: 427 HALAVKIGFIFDAHVVNGLIDSYWKCSCLSDA 458
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 181/363 (49%), Gaps = 15/363 (4%)
Query: 47 LNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
LNG+ L Q S L P V T S S+L+ C + IH ++K +
Sbjct: 280 LNGHDHRAIELLLQMKYSGLV--PNVFTLS--SILKACSGAGAFDLGRQIHGFMIKANAD 335
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
D ++ LV++Y K +++A+KVFD + +++ +LISG + + A+ +F ++
Sbjct: 336 SDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYEL 395
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
+ G TL L + +SLE+ +Q+HA VK D V N L Y C L
Sbjct: 396 RKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCL 455
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ A + F ++++ T++I A + ++ F +ML +G++P+ F L+S+ + C
Sbjct: 456 SDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNAC 515
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
++ + G QVH+ IK + S+ N+++Y Y KCG +++A+ F + +V+W+
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWS 575
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
AMI G AQ H G AL +F ++ G+ P+ T +S+L C+ +++
Sbjct: 576 AMIGGLAQ-----------HGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDE 624
Query: 407 GEQ 409
++
Sbjct: 625 AKR 627
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 151/297 (50%), Gaps = 6/297 (2%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EALS+ EG V ++ ++L+ + ++ S +HA VK G D V+ L
Sbjct: 386 DEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGL 445
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y KC + +A +VF+ ++++ TS+I+ Q E AI +F++ML G P
Sbjct: 446 IDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDP 505
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L + L AC+SL + GKQ+HA+++K Q D GN+L Y+ CGS+ A AF+
Sbjct: 506 FVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSS 565
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRV 294
+ E+ V+SW+ +IG ++G + L F +M+ EGI PN T+TS+ C L
Sbjct: 566 LPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+S+ G + ++ L + G +D+A +L + M N W A++
Sbjct: 626 KRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLG 682
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 114/273 (41%), Gaps = 39/273 (14%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T S LT + AL G +HA LK+G L+ L++ Y KC R A R F E+
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFR--NHLISFYSKCRRPCCARRFFDEI 63
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF---------------VG 494
+SW+S++T ++N+ L A+Q F M GV N+ V
Sbjct: 64 PDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVH 123
Query: 495 ALAACSNAG---MVYEAL----GYFEMMQKEYKIKPVMD------HYMCLIDMFVRLGCI 541
A+A + G V AL G F M ++ D + L+ +V+
Sbjct: 124 AMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQC 183
Query: 542 EEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESYAML 597
+A +M +P E +S + C N+E G ++++ KD + L
Sbjct: 184 GDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANAL 243
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+D+++ GR + +V+ EK+ ++D SW
Sbjct: 244 VDMYMKMGRVDIASVIF-----EKMPDSDVVSW 271
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/686 (34%), Positives = 391/686 (56%), Gaps = 20/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+++ +L V SL+ + +H +K G V L+N+Y K + A+ VF+N+
Sbjct: 324 TFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNM 383
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLG 194
+++SW S+I+G Q+ A+ +F+ +L G P + T+ + L A SSL E + L
Sbjct: 384 SERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLS 443
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQIH + +K D+ V +L YS + A F R ++++W ++ ++
Sbjct: 444 KQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQS 502
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + L F+ M +G + ++FTL ++ CG + ++ G QVH+ IK GY +L V
Sbjct: 503 HDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 562
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ I+ +Y+KCG + AQ FD + + V W +I+G + NG E AL
Sbjct: 563 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE------------NGEEERAL 610
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+FS++ G+ PD +T +++ S L ALEQG QIHA LK SD VGT+LV+MY
Sbjct: 611 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMY 670
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A +F + + +W +M+ G A H +ALQLF+ M G++P++VTF+
Sbjct: 671 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFI 730
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+V EA Y M ++Y IKP ++HY CL D R G ++EA + I M
Sbjct: 731 GVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSM 790
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
E + ++ +A CR G+ E G A +LL+L+P D +Y +L +++ +A +W+++ +
Sbjct: 791 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 850
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ + + K+ + +SWI +K+K++ F +D +PQ+ I+K + +++ K GY +
Sbjct: 851 RTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPET 910
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D +E A YHSEKLA+AFGLL+TP +PI V+K+ +C DCHN +K I+ +
Sbjct: 911 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYISKV 970
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI++RD+ R H+F +G C+C D+
Sbjct: 971 YDREIVLRDANRFHRFKDGICSCGDY 996
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 247/494 (50%), Gaps = 24/494 (4%)
Query: 103 TGSHQDFFVMTFLVNVYG---KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA 159
+G H + + L + G + G ++ + D ++S ++SGY+ Q
Sbjct: 247 SGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSAL 306
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
+ F+DM+E+ VT L L+S+ LG+Q+H +K + +V NSL ++
Sbjct: 307 LKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINM 366
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
Y + A FN + E++++SW +VI ++ V+ + F ++L G++P+ +T+
Sbjct: 367 YCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTM 426
Query: 280 TSISSVCGTML-SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
TS+ ++ L + Q+H IK ++ V +++ Y + + EA+ LF G +
Sbjct: 427 TSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRN 485
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+ +LV WNAM++G+ Q D G + L +F+ ++ G + D +T +++L C
Sbjct: 486 NFDLVAWNAMMSGYTQSHD-----------GHKTLELFALMHKQGERSDDFTLATVLKTC 534
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
L A+ QG+Q+HA +K+G+ D+ V + +++MY KCG + A F + ++WT
Sbjct: 535 GFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT 594
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
++I+G + +AL +F M L GV P++ T + LA S+ E ++
Sbjct: 595 TLISGCIENGEEERALHVFSQMRLMGVLPDEFT-IATLAKASSCLTALEQGR--QIHANA 651
Query: 519 YKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME-- 574
K+ D ++ L+DM+ + G I++A+ K+++ N W+ + G +HG +
Sbjct: 652 LKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKEA 710
Query: 575 LGFYAAEQLLKLKP 588
L + + L +KP
Sbjct: 711 LQLFKQMESLGIKP 724
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 216/497 (43%), Gaps = 60/497 (12%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L++ ++ L + HA I+ + + F++ L+++Y KCG++ A++VFD +P +
Sbjct: 52 FLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERD 111
Query: 140 VVSWTSLISGYVQNSQPEL-----AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+VSW S+++ Y Q+S+ + A +F + + Y + +TL L C +
Sbjct: 112 LVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCAS 171
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ H Y K + D V +L ++Y G + F + ++V+ W ++ A E
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEM 231
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL--GIKLGYASNLR 312
G + + S + G+ PNE TL +S + G QV S G S +
Sbjct: 232 GFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSE---AGQVKSFENGNDASAVSEII 288
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
RN I+ YL G K F MD+ + DL
Sbjct: 289 SRNKILSGYLHAGQYSALLKCF---------------------MDMVESDLEC------- 320
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
D TF +L RL +L G+Q+H + LK G + V +L+NM
Sbjct: 321 --------------DQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINM 366
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K +I A VF MS R LISW S+I G A L +A+ LF +L G++P+ T
Sbjct: 367 YCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTM 426
Query: 493 VGALAACSNAGMVYEALGYFEMMQ-KEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIK 549
L A S+ + E L + + K V D ++ LID + R C++EA
Sbjct: 427 TSVLKAASS---LPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFG 483
Query: 550 KMDFEPNEVIWSVFIAG 566
+ +F+ V W+ ++G
Sbjct: 484 RNNFDL--VAWNAMMSG 498
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 145/272 (53%), Gaps = 1/272 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + + ++L+ C +++ + +HA+ +K+G D +V + ++++Y KCG+M
Sbjct: 518 QGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 577
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ FD++P + V+WT+LISG ++N + E A+HVF M G P T+ T A S
Sbjct: 578 AQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSC 637
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L ++ G+QIHA +K D VG SL +Y+ CGS++ A F RI N+ +W +
Sbjct: 638 LTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 697
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLG 306
+ ++GE + L+ F +M S GI+P++ T + S C + L + S+ G
Sbjct: 698 LVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYG 757
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ + + + GLV EA+ L D MS
Sbjct: 758 IKPEIEHYSCLADALGRAGLVKEAENLIDSMS 789
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/699 (32%), Positives = 398/699 (56%), Gaps = 20/699 (2%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+S P ++T + SLL+ C R L+ +HA + G + T L N+Y K
Sbjct: 49 AMSSAGAPPVLRT--FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTNVTLGT 180
C +A++VFD +P + V+W +L++GY +N +A+ + + M E G P ++TL +
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L AC++ ++ ++ HA+ ++ E+ +V ++ Y CG + +A F+ + KN
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW +I +NG++ + L F++M+ EG+ + ++ + CG + L G +VH
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L +++G SN+ V N+++ +Y KC VD A +FD + V+WNAMI G AQ
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ------ 340
Query: 361 DDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
NG +E A+ +F+++ +KPD +T S++ + + Q IH +++
Sbjct: 341 ------NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHL 394
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV V TAL++MY KCGR+ A +F R +I+W +MI G+ +H A++LFE+
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEE 454
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G+ PN+ TF+ L+ACS+AG+V E YF M+++Y ++P M+HY ++D+ R G
Sbjct: 455 MKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAG 514
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EA+ FI+KM +P ++ + C+ H N+EL +A+++ +L P++ + +L +
Sbjct: 515 KLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLAN 574
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +A W+DVA V+ + L +T WS I++K+++++F H Q+ EI+ L +
Sbjct: 575 IYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAK 634
Query: 660 LVEKAKCFGY--KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
L+E+ K GY ++ D+ A + HSEKLAIAFGL+ T + I + K+ +C
Sbjct: 635 LIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVC 694
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHN K+I+ +T REII+RD +R H F +G C+C D+
Sbjct: 695 NDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDY 733
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 233/507 (45%), Gaps = 58/507 (11%)
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
A+ F+ M AG P T + L C++ + G+ +HA + + + +L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEF 277
+Y+ C A + F+R+ ++ ++W ++ NG A + +M EG +P+
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
TL S+ C +L + H+ I+ G + V +I+ Y KCG + A+ +FD M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILT 396
N V+WNAMI G+AQ NG + EAL++F+++ G+ + + L
Sbjct: 223 PTKNSVSWNAMIDGYAQ------------NGDSREALALFNRMVEEGVDVTDVSVLAALQ 270
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C L L++G ++H L ++ G S+V V AL+ MY KC R++ AS VF E+ RT +S
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W +MI G A + S A++LF M L V+P+ T V + A ++ + + L +
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALAD---ISDPLQARWIHG 387
Query: 517 KEYKIKPVMDHYM--CLIDMFVRLGCIE-------------------------------- 542
++ D Y+ LIDM+ + G +
Sbjct: 388 YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKA 447
Query: 543 --EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAML 597
E F+ +K + PNE + ++ C G ++ G F + ++ L+P E Y +
Sbjct: 448 AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPG-MEHYGTM 506
Query: 598 LDIFVSAGRWEDV-AVVKNLTREEKLS 623
+D+ AG+ ++ A ++ + + LS
Sbjct: 507 VDLLGRAGKLDEAWAFIQKMPMDPGLS 533
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 15/218 (6%)
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
A+ DL A AL+ F ++S+G P L TF+S+L +C+ L G +HA G
Sbjct: 36 ARSDLPA------ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARG 89
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
S+ + TAL NMY KC R A RVF M R ++W +++ G+A + L+ A+++
Sbjct: 90 IDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVV 149
Query: 479 DML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M G RP+ +T V L AC+NA + + ++ +++ ++D + +
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCK 208
Query: 538 LGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
G I A FD++ N V W+ I G ++G+
Sbjct: 209 CGDIRAARVVFDWMPT----KNSVSWNAMIDGYAQNGD 242
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/705 (33%), Positives = 399/705 (56%), Gaps = 21/705 (2%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL++ L G + ++ +L+ C L+ +H H+++ G D V+
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCG++ A+ VFD +PR + +SW ++ISGY +N + +F M E P
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPD 295
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ + ++AC +L RLG+++H YV+K + SV NSL ++S+ G + A F+
Sbjct: 296 LMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ K+++SWT +I +NG + + ++ M EG+ P+E T+ S+ S C + L
Sbjct: 356 KMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDK 415
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H + G S + V NS++ +Y KC +D+A ++F + + N+++W ++I G
Sbjct: 416 GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG--- 472
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L + EAL F ++ S +KP+ T S+L+ C+R+ AL G++IHA
Sbjct: 473 --------LRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHA 523
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
L+TG D + AL++MY +CGR+E A F + + SW ++TG+A A+
Sbjct: 524 LRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAV 582
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LF M+ + V P+++TF L ACS +GMV + L YFE M+ ++ I P + HY ++D+
Sbjct: 583 ELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL 642
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G +E+A++FIKKM +P+ IW + CR + N+ELG AA+ + ++ K Y
Sbjct: 643 LGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYY 702
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ +G+W++VA V+ + RE +L+ SW+ + +V++F D HPQ EI
Sbjct: 703 ILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEIN 762
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEES--ASVY--HSEKLAIAFGLLNTPIVSPILVVK 710
VL+ EK + G + D ++ A ++ HSE+LAIAFGL+NT +PI V K
Sbjct: 763 AVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTK 822
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+ MC +CHN +K I+ + R I VRD+++ H F +G C+C D G
Sbjct: 823 NLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEG 867
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 293/577 (50%), Gaps = 56/577 (9%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V+ +Y++LL+ C +++ S +H+++ KT + + L++++ + G++ EA V
Sbjct: 92 VEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYV 151
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + ++ SW L+ GY + + A++++ ML G P T L C L +
Sbjct: 152 FGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDL 211
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+++H +V++Y E D V N+L ++Y CG + SA F+R+ ++ +SW +I
Sbjct: 212 ARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGY 271
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
EN ++GLR F M + P+ T+TS+ S C + R+G +VH IK G+ + +
Sbjct: 272 FENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEV 331
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ ++ G DEA+ +F M +LV+W AMI+G+ + NG E
Sbjct: 332 SVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK------------NGLPE 379
Query: 372 -ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
A+ ++ + G+ PD T +S+L+ C+ L L++G +H +TG S V+V +L+
Sbjct: 380 KAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLI 439
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KC I++A VF + + +ISWTS+I G + S +AL F+ M+L+ ++PN V
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSV 498
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAF--- 545
T V L+AC+ G + + G E+ + D ++ L+DM+VR G +E A+
Sbjct: 499 TLVSVLSACARIGAL--SCGK-EIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF 555
Query: 546 ---------------------------DFIKKM---DFEPNEVIWSVFIAGCRRHGNMEL 575
+ KM D P+E+ ++ + C R G +
Sbjct: 556 NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTD 615
Query: 576 G---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + E + P + + YA ++D+ AGR ED
Sbjct: 616 GLEYFESMEHKFHIAP-NLKHYASVVDLLGRAGRLED 651
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 19/320 (5%)
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + L M + E T ++ +C + G++VHS K +R+
Sbjct: 73 GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ ++++ G + EA +F M+ +L +WN ++ G+A+ EAL+
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYF-----------DEALN 181
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
++ ++ G++PD+YTF +L C L L +G ++H ++ GF SDV V AL+ MY
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A VF M R ISW +MI+G+ + + + L+LF M V P+ +T
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301
Query: 495 ALAACSNAG---MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
++AC G + E GY +++ + + +++ LI M +GC +EA KM
Sbjct: 302 VISACEALGDERLGREVHGY--VIKTGFVAEVSVNN--SLIQMHSSVGCWDEAEMVFSKM 357
Query: 552 DFEPNEVIWSVFIAGCRRHG 571
+F+ + V W+ I+G ++G
Sbjct: 358 EFK-DLVSWTAMISGYEKNG 376
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/687 (35%), Positives = 387/687 (56%), Gaps = 24/687 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C +L + IH K G + FV L+++Y + G A+ +FD++
Sbjct: 220 TFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 276
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++ SW ++ISG +QN A+ V +M G VT+ + L C L I
Sbjct: 277 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM 336
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH YV+K+ E D V N+L ++Y+ G+L A KAF ++ +V+SW ++I A +N
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVR 314
+ V FF KM G QP+ TL S++S+ + VH ++ G+ ++ +
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
N+++ +Y K GL+D A K+F+ + ++++WN +I G+AQ NG +EA+
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQ------------NGLASEAI 504
Query: 374 SIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++ + + P+ T+ SIL + + AL+QG +IH +KT DV V T L+++
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDV 564
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCGR+ A +F ++ + ++W ++I+ H + + L+LF +ML GV+P+ VTF
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
V L+ACS++G V E F +MQ EY IKP + HY C++D+ R G +E A+DFIK M
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP 683
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+P+ IW + CR HGN+ELG +A+++L ++ K+ Y +L +I+ + G+WE V
Sbjct: 684 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDK 743
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V++L RE L +T WS I + KV F + HP+ EI++ L L K K GY
Sbjct: 744 VRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPD 803
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
SF L D +E HSE+LAIAFG+++TP SPI + K+ +C DCHN K I+
Sbjct: 804 YSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISR 863
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T REI+VRDS R H F +G C+C D+
Sbjct: 864 ITQREIVVRDSNRFHHFKDGICSCGDY 890
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 269/527 (51%), Gaps = 31/527 (5%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A+ +HA +V G Q F+ T LVN+Y G++ ++ FD +P+ +V +W S+IS YV
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194
Query: 153 NSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
N AI F +L P T L AC +L G++IH + K + +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 251
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V SL +YS G A F+ + +++ SW +I +NG A Q L +M EG
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
I+ N T+ SI VC + + +H IK G +L V N+++ +Y K G +++A+
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
K F M ++V+WN++IA + Q D ++AH F K+ +G +PDL T
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQ----NDDPVTAH-------GFFVKMQLNGFQPDLLTL 420
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEMS 450
S+ +I ++ + +H ++ G+L DVV+G A+V+MY K G ++ A +VF +
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIP 480
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ +ISW ++ITG+A + L+ +A+++++ M + PNQ T+V L A ++ G + + +
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 540
Query: 510 GYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
++ + K +D ++ CLID++ + G + +A ++ E + V W+ I+
Sbjct: 541 ---KIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCH 596
Query: 568 RRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDI-----FVSAGRW 607
HG+ E ++L +KP D ++ LL FV G+W
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKP-DHVTFVSLLSACSHSGFVEEGKW 642
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 29/428 (6%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIH 97
S LIQ NGN+ +AL VL E G K+ + VS+L C +S A +IH
Sbjct: 289 SGLIQ-NGNAA--------QALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIH 339
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE 157
+++K G D FV L+N+Y K GN+E+A+K F + +VVSW S+I+ Y QN P
Sbjct: 340 LYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPV 399
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSL 216
A F+ M G P +TL + + + + + +H ++++ +D +GN++
Sbjct: 400 TAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAV 459
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQP 274
+Y+ G L+SA K F I K+V+SW T+I +NG A + + + KM+ E I P
Sbjct: 460 VDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIP 518
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N+ T SI + +L+ G ++H IK ++ V ++ +Y KCG + +A LF
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ + VTWNA+I+ H H + L +F ++ G+KPD TF S+
Sbjct: 579 YQVPQESSVTWNAIISCHG-----------IHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 627
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ CS +E+G+ L + G + +V++ + G +E A +M +
Sbjct: 628 LSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD 687
Query: 455 IS-WTSMI 461
S W +++
Sbjct: 688 ASIWGALL 695
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/761 (32%), Positives = 397/761 (52%), Gaps = 83/761 (10%)
Query: 66 LTEGPKVQTSSYVSLLQECVN---RKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGK 121
+T + Y ++L R + A +H I+KT F++ L+ Y K
Sbjct: 1 MTHAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAK 60
Query: 122 CGNMEEAQKVFDNLPRINV-------------------------------VSWTSLISGY 150
G + A++VFD +P N+ VS+ +LI+G+
Sbjct: 61 SGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGF 120
Query: 151 VQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
P ++ ++ +L E PT +TL + S+L LG +H V++
Sbjct: 121 SSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAY 180
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---------------------------- 241
VG+ L +Y+ G + A + F + K V
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD 240
Query: 242 ---MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++WTT++ +NG ++ L F +M +EG+ +++T SI + CG + + G Q+
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQI 300
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+ + Y N+ V ++++ +Y KC + A+ +F M+ N+++W AMI G+ Q
Sbjct: 301 HAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQ---- 356
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+ EA+ FS++ G+KPD +T S+++ C+ L +LE+G Q H L L +G
Sbjct: 357 -------NACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 409
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ + V ALV +Y KCG IE A R+F EMS +SWT+++TG+A + + + LFE
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFE 469
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
ML+ G++P+ VTF+G L+ACS AG+V + YF+ MQK++ I P+ DHY C+ID++ R
Sbjct: 470 KMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRS 529
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +EA +FIK+M P+ W+ ++ CR GNME+G +AAE LL+ P++ SY +L
Sbjct: 530 GRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLC 589
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+ + G+W +VA ++ R+ ++ + SWI+ K+KV+ F +D HP S+ I++ L+
Sbjct: 590 SMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLE 649
Query: 659 ELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
L K GYK S L D A +HSEKLAIAFGL+ P PI +VK+
Sbjct: 650 WLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKNLR 709
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN K I+ +T R+I+VRD+ R HKF +G C+C DF
Sbjct: 710 VCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDF 750
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 235/474 (49%), Gaps = 55/474 (11%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTE---GPKVQTSSYVSLL 81
A++ +++ VSY + + + P RS+ AL L E P T S + ++
Sbjct: 102 FASMPERD-AVSYN---ALITGFSSTGSPARSVQLYRAL--LREESVRPTRITLSAMIMV 155
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
++ ++L ++ +H +++ G FV + LV++Y K G + +A++VF + VV
Sbjct: 156 ASALSDRALGHS--VHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 142 -------------------------------SWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+WT++++G QN A+ VF M G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
T G+ LTAC +L + GKQIHAY+ + ED+ VG++L +YS C S+ A
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F R+ +N++SWT +I G+N + + +R FS+M +GI+P++FTL S+ S C +
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
SL GAQ H L + G + V N+++ LY KCG +++A +LFD MS + V+W A++
Sbjct: 394 SLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVT 453
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQ 409
G+AQ E + +F K+ +G+KPD TF +L+ CSR +E+G +
Sbjct: 454 GYAQF-----------GKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDY 502
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMIT 462
++ + T ++++Y + GR + A +M + W ++++
Sbjct: 503 FDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLS 556
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/699 (32%), Positives = 398/699 (56%), Gaps = 20/699 (2%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+S P ++T + SLL+ C R L+ +HA + G + T L N+Y K
Sbjct: 49 AMSSAGAPPVLRT--FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTNVTLGT 180
C +A++VFD +P + V+W +L++GY +N +A+ + + M E G P ++TL +
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L AC++ ++ ++ HA+ ++ E+ +V ++ Y CG + +A F+ + KN
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW +I +NG++ + L F++M+ EG+ + ++ + CG + L G +VH
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L +++G SN+ V N+++ +Y KC VD A +FD + V+WNAMI G AQ
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ------ 340
Query: 361 DDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
NG +E A+ +F+++ +KPD +T S++ + + Q IH +++
Sbjct: 341 ------NGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHL 394
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV V TAL++MY KCGR+ A +F R +I+W +MI G+ +H A++LFE+
Sbjct: 395 DQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEE 454
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G+ PN+ TF+ L+ACS+AG+V E YF M+++Y ++P M+HY ++D+ R G
Sbjct: 455 MKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAG 514
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EA+ FI+KM +P ++ + C+ H N+EL +A+++ +L P++ + +L +
Sbjct: 515 KLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLAN 574
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +A W+DVA V+ + L +T WS I++K+++++F H Q+ EI+ L +
Sbjct: 575 IYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAK 634
Query: 660 LVEKAKCFGY--KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
L+E+ K GY ++ D+ A + HSEKLAIAFGL+ T + I + K+ +C
Sbjct: 635 LIEEIKAVGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVC 694
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHN K+I+ +T REII+RD +R H F +G C+C D+
Sbjct: 695 NDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDY 733
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/679 (34%), Positives = 379/679 (55%), Gaps = 51/679 (7%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNY 172
L++ + G + + +++F +LP+ + VS+ +L++G+ + A ++ +L EAG
Sbjct: 83 LLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVR 142
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P+ +T+ + S+L LG+Q+H +++ G+ L +Y+ G + A +
Sbjct: 143 PSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRV 202
Query: 233 FNRIREKNV-------------------------------MSWTTVIGACGENGEAVQGL 261
F+ + KNV ++WTT++ +NG + L
Sbjct: 203 FDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEAL 262
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F +M +EG+ +++T SI + CG + +L G Q+H+ + Y N+ V ++++ +Y
Sbjct: 263 DVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMY 322
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLN 380
KC V A+ +F M N+++W AMI G+ Q NG G EA+ +FS++
Sbjct: 323 SKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQ------------NGCGEEAVRVFSEMQ 370
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G+KPD +T S+++ C+ L +LE+G Q H L L +G V V ALV +Y KCG IE
Sbjct: 371 RDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A R+F EMS +SWT+++ G+A + + + LFE ML GV+P+ VTF+G L+ACS
Sbjct: 431 DAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACS 490
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+G+V + YF MQ+++ I P+ DHY C+ID++ R G +++A +FIK+M P+ W
Sbjct: 491 RSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGW 550
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ ++ CR G+ME+G +AAE LLKL P++ SY +L + S G W DVA ++ R+
Sbjct: 551 ATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDR 610
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
++ + SWI+ K+KV+ F +D HP S I++ L L K GYK S L D
Sbjct: 611 QVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEEGYKPDVSSVLHDV 670
Query: 681 ESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIV 735
A +HSEKLAIAFGL+ P PI +VK+ +C DCHN K I+ +T R+I+V
Sbjct: 671 ADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNATKFISKITGRDILV 730
Query: 736 RDSKRLHKFVNGHCTCRDF 754
RD+ R HKF NG C+C DF
Sbjct: 731 RDAVRFHKFSNGICSCGDF 749
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 209/412 (50%), Gaps = 45/412 (10%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T S V ++ + ++L +H I++ G F + LV++Y K G + +A+
Sbjct: 143 PSRITMSGVVMVASALGDRALGRQ--VHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDAR 200
Query: 130 KVFDNLPRINVV-------------------------------SWTSLISGYVQNSQPEL 158
+VFD + NVV +WT++++G QN
Sbjct: 201 RVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESE 260
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
A+ VF M G T G+ LTAC +L ++ GKQIHAY+ + ED+ VG++L
Sbjct: 261 ALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVD 320
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+YS C S+ A F R+ KN++SWT +I G+NG + +R FS+M +GI+P++FT
Sbjct: 321 MYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFT 380
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
L S+ S C + SL GAQ H L + G + V N+++ LY KCG +++A +LFD MS
Sbjct: 381 LGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS 440
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+ V+W A++ G+AQ E + +F K+ S G+KPD TF +L+ C
Sbjct: 441 FHDQVSWTALVMGYAQF-----------GKAKETIDLFEKMLSKGVKPDGVTFIGVLSAC 489
Query: 399 SRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
SR +++G H++ + T ++++Y + G +++A +M
Sbjct: 490 SRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQM 541
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 126/230 (54%), Gaps = 4/230 (1%)
Query: 61 EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL V EG + ++ S+L C +L + IHA+I +T + FV + LV
Sbjct: 260 EALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALV 319
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KC ++ A+ VF + N++SWT++I GY QN E A+ VF +M G P +
Sbjct: 320 DMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDF 379
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TLG+ +++C++L S+ G Q H + +V N+L +LY CGS+ A + F+ +
Sbjct: 380 TLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEM 439
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ +SWT ++ + G+A + + F KMLS+G++P+ T + S C
Sbjct: 440 SFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSAC 489
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 148/352 (42%), Gaps = 60/352 (17%)
Query: 296 AQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
A VH+L ++ L + S + N+++ Y GL+ A+++FD M NLVT N++++ A+
Sbjct: 30 AAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALAR 89
Query: 355 ----------MMDLAKDDLSAHNGGTEALSIFSKL------------NSSGMKPDLYTFS 392
L + D ++N S + +G++P T S
Sbjct: 90 AGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMS 149
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++ + S L G Q+H L+ GF + G+ LV+MY K G I A RVF EM +
Sbjct: 150 GVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGK 209
Query: 453 TL-------------------------------ISWTSMITGFANHSLSHQALQLFEDML 481
+ I+WT+M+TG + L +AL +F M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGC 540
GV +Q TF L AC + E + + Y+ + L+DM+ +
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGS--ALVDMYSKCRS 327
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKD 590
+ A ++M ++ N + W+ I G ++G E + ++ Q +KP D
Sbjct: 328 VRLAEAVFRRMMWK-NIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDD 378
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 12/206 (5%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ V +E G K + S++ C N SL H + +G V L
Sbjct: 360 EEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNAL 419
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +YGKCG++E+A ++FD + + VSWT+L+ GY Q + + I +F ML G P
Sbjct: 420 VTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDG 479
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS----LCSLYSTCGSLNSAIK 231
VT L+ACS + G+ +Y Q + D + + LYS G L A +
Sbjct: 480 VTFIGVLSACSRSGLVDKGR---SYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEE 536
Query: 232 AFNRI-REKNVMSWTTVIGACGENGE 256
++ R + W T++ AC G+
Sbjct: 537 FIKQMPRCPDAFGWATLLSACRLRGD 562
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/781 (31%), Positives = 403/781 (51%), Gaps = 115/781 (14%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ +LQ V K +H I+K G H ++M L+ Y K G++ A VFD +P
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 137 RINVVSWTSLISGYVQNSQPEL-------------------------------AIHVFLD 165
+ SW +LISGY + E+ AI +F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY--------------------- 204
M+ P+ T+ L++C++ +++ +G++IH++VVK
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 205 ----------QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
T + S N+L SLY G A F ++ +++++SW ++I +
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 255 GEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G ++ L FSKML+E ++P+ FTL SI S C + L +G Q+H+ ++ ++ V
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 314 RNSIMYLYLKCGLVD---------------------------------EAQKLFDGMSHV 340
N+++ +Y K G V+ A+++F+ +
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
++V W AMI G+ Q NG +AL +F + + G +P+ YT +++L++ S
Sbjct: 373 DVVAWTAMIVGYVQ------------NGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWT 458
L LE G+QIHA +K G S V AL+ MY K G I A RVF + + ++SWT
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
SMI A H L +A+ LFE ML G++P+ +T+VG L+AC++ G+V + Y+ MM +
Sbjct: 481 SMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEV 540
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
++I+P + HY C+ID++ R G ++EA+ FI+ M EP+ + W +A C+ H N +L
Sbjct: 541 HEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKV 600
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AAE+LL + P + +Y L +++ + G+WE+ A + L ++ + + SWI IK++V+
Sbjct: 601 AAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVH 660
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAI 693
+F D +HPQ EI+K++ E+ E+ K G+ L D +E YHSEKLAI
Sbjct: 661 AFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAI 720
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
AFGLLNTP + + ++K+ +C DCH+ IK I+ L REIIVRD+ R H F +G C+CRD
Sbjct: 721 AFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRD 780
Query: 754 F 754
+
Sbjct: 781 Y 781
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 195/444 (43%), Gaps = 95/444 (21%)
Query: 61 EALSVLTE---GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EAL++ ++ P ++ ++ S+L C N + L+ + IHA+I++ + V L
Sbjct: 257 EALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 116 VNVYGKC---------------------------------GNMEEAQKVFDNLPRINVVS 142
+++Y K GN++ A+++F+ L +VV+
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
WT++I GYVQN A+ +F M+ G P + TL L+ SSL + GKQIHA +
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGL 261
K SV N+L ++Y+ G++N A + F+ +K ++SWT++I A ++G + +
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAI 496
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F +MLS G++P+ T + S C
Sbjct: 497 NLFERMLSVGMKPDHITYVGVLSAC----------------------------------- 521
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
GLV++ +K ++ M+ V+ + ++ +A M+ DL G + +F + S
Sbjct: 522 THVGLVEQGRKYYNMMTEVHEI--EPTLSHYACMI-----DLYGRAGLLQEAYLF--IES 572
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV---VVGTALVNMYKKCGR 438
++PD + S+L C + + + + + L D AL N+Y CG+
Sbjct: 573 MPIEPDNIAWGSLLASCK----IHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGK 628
Query: 439 IERASRVFVEMSTRTL-----ISW 457
E A++ M R + ISW
Sbjct: 629 WENAAQTRKLMKDRGVRKEKGISW 652
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/667 (35%), Positives = 385/667 (57%), Gaps = 21/667 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L+ +++HAH++ + + T LV++Y KC ++E+A KV +V WT++ISG
Sbjct: 232 LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISG 291
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ Q+ + AI F +M +G P N T L ACSS+ ++ LGKQIH+ VV E+D
Sbjct: 292 FTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEND 351
Query: 210 TSVGNSLCSLYSTCGSL-NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
SVGNSL +Y C ++ A++AF I NV+SWT++I E+G + ++ F M
Sbjct: 352 VSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQ 411
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G++PN FTL++I CGT+ SL ++H IK +++ V N+++ Y G+VD
Sbjct: 412 GVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVD 471
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPD 387
+A + M H +++T+ ++ Q G E AL+I + +N ++ D
Sbjct: 472 DAWHVTSMMKHRDVITYTSLATRINQ------------TGNHEMALNIITHMNKDDVRMD 519
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
++ +S L+ + + +E G+Q+H ++K+G S + V LV++Y KCG I A R F+
Sbjct: 520 GFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFL 579
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
E++ +SW +I G A++ AL FEDM LAGV P+Q+T + L ACS+ G+V
Sbjct: 580 EITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDM 639
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L YF+ M++++ I+P +DHY+CL+D+ R G +EEA + I+ M F+P+ +I+ + C
Sbjct: 640 GLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGAC 699
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
+ HGN+ LG + A Q L+L P D Y +L +++ +GR E + + RE + +
Sbjct: 700 KLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPG 759
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYH 687
SW+ ++ V+ F D HPQ +I + ++ L+ + + G QE+ A +H
Sbjct: 760 QSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQGIWYQEN-------RALAHH 812
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLA+AFGL++TP +PI ++K+ +CRDCH+FI +T L REIIVRD R H F G
Sbjct: 813 SEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKG 872
Query: 748 HCTCRDF 754
C+CR +
Sbjct: 873 ECSCRGY 879
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 260/489 (53%), Gaps = 25/489 (5%)
Query: 71 KVQTSSYVSLLQECV---NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
K+ + SLL++ V N +S+ + IH+ I+K G +D F+ L+++YGKC + E
Sbjct: 9 KIPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAE 68
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD +P +V SWT L+S Y + E A+ +F ML +G YP TL TAL +CS+
Sbjct: 69 ARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSA 128
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L G + A V K + + +G++L YS CG A + F + +++SWT +
Sbjct: 129 LREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMM 188
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + E G Q L+ + +M+ G+ PNEFT + + + L L G VH+ +
Sbjct: 189 VSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAA-SSFLGLNYGKLVHAHLMMWRI 247
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
NL ++ +++ +Y KC +++A K+ ++ W A+I+G Q +
Sbjct: 248 ELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKF--------- 298
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA++ F ++ +SG+ P+ +T+S IL CS ++AL+ G+QIH+ + G +DV VG
Sbjct: 299 --REAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGN 356
Query: 428 ALVNMYKKCGR-IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+LV+MY KC IE A R F +++ +ISWTS+I GF+ H L +++++F M GVR
Sbjct: 357 SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVR 416
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIE 542
PN T L AC + + Y IK D+ + L+D + LG ++
Sbjct: 417 PNSFTLSTILGACGTIKSLTQTRKL-----HGYIIKNNADNDVVVGNALVDAYAGLGMVD 471
Query: 543 EAFDFIKKM 551
+A+ M
Sbjct: 472 DAWHVTSMM 480
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 265/533 (49%), Gaps = 27/533 (5%)
Query: 60 QEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL S+L G + + L+ C + ++ A + K+G + + + L
Sbjct: 98 EEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSAL 157
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y KCG +EA +VF+ + ++VSWT ++S +V+ A+ ++ M++ G P
Sbjct: 158 IDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNE 217
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T L A SS + GK +HA+++ ++ E + + +L +Y C S+ A+K
Sbjct: 218 FTF-VKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKL 276
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
E +V WT +I ++ + + + F +M + G+ PN FT + I + C ++L+L +G
Sbjct: 277 TLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLG 336
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKC-GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
Q+HS + G +++ V NS++ +Y+KC ++++A + F G++ N+++W ++IAG
Sbjct: 337 KQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAG--- 393
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S H E++ +F + G++P+ +T S+IL C + +L Q ++H
Sbjct: 394 --------FSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYI 445
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K +DVVVG ALV+ Y G ++ A V M R +I++TS+ T AL
Sbjct: 446 IKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMAL 505
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC---- 530
+ M VR + + L+A AG+ G Y +K + ++
Sbjct: 506 NIITHMNKDDVRMDGFSLASFLSAA--AGIPIMETG---KQLHCYSVKSGLGSWISVSNG 560
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
L+D++ + GCI +A ++ EP+ V W+ I G +G++ A E +
Sbjct: 561 LVDLYGKCGCIHDAHRSFLEIT-EPDAVSWNGLIFGLASNGHVSSALSAFEDM 612
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 111/231 (48%), Gaps = 4/231 (1%)
Query: 60 QEALSVL--TEGPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+E++ V +G V+ +S+ ++L C KSL+ +H +I+K + D V L
Sbjct: 401 EESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNAL 460
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V+ Y G +++A V + +V+++TSL + Q E+A+++ M +
Sbjct: 461 VDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDG 520
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+L + L+A + + + GKQ+H Y VK SV N L LY CG ++ A ++F
Sbjct: 521 FSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLE 580
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
I E + +SW +I NG L F M G++P++ T + C
Sbjct: 581 ITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYAC 631
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/781 (31%), Positives = 403/781 (51%), Gaps = 115/781 (14%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ +LQ V K +H I+K G H ++M L+ Y K G++ A VFD +P
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 137 RINVVSWTSLISGYVQNSQPEL-------------------------------AIHVFLD 165
+ SW +LISGY + E+ AI +F
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY--------------------- 204
M+ P+ T+ L++C++ +++ +G++IH++VVK
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 205 ----------QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
T + S N+L SLY G A F ++ +++++SW ++I +
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 255 GEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G ++ L FSKML+E ++P+ FTL SI S C + L +G Q+H+ ++ ++ V
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 314 RNSIMYLYLKCGLVD---------------------------------EAQKLFDGMSHV 340
N+++ +Y K G V+ A+++F+ +
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
++V W AMI G+ Q NG +AL +F + + G +P+ YT +++L++ S
Sbjct: 373 DVVAWTAMIVGYVQ------------NGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWT 458
L LE G+QIHA +K G S V AL+ MY K G I A RVF + + ++SWT
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWT 480
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
SMI A H L +A+ LFE ML G++P+ +T+VG L+AC++ G+V + Y+ MM +
Sbjct: 481 SMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEV 540
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
++I+P + HY C+ID++ R G ++EA+ FI+ M EP+ + W +A C+ H N +L
Sbjct: 541 HEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKV 600
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AAE+LL + P + +Y L +++ + G+WE+ A + L ++ + + SWI IK++V+
Sbjct: 601 AAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIHIKNEVH 660
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAI 693
+F D +HPQ EI+K++ E+ E+ K G+ L D +E YHSEKLAI
Sbjct: 661 AFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDLEEEVKEQILKYHSEKLAI 720
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
AFGLLNTP + + ++K+ +C DCH+ IK I+ L REIIVRD+ R H F +G C+CRD
Sbjct: 721 AFGLLNTPENTALRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKDGSCSCRD 780
Query: 754 F 754
+
Sbjct: 781 Y 781
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 194/444 (43%), Gaps = 95/444 (21%)
Query: 61 EALSVLTE---GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EAL + ++ P ++ ++ S+L C N + L+ + IHA+I++ + V L
Sbjct: 257 EALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNAL 316
Query: 116 VNVYGKC---------------------------------GNMEEAQKVFDNLPRINVVS 142
+++Y K GN++ A+++F+ L +VV+
Sbjct: 317 ISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVA 376
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
WT++I GYVQN A+ +F M+ G P + TL L+ SSL + GKQIHA +
Sbjct: 377 WTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAI 436
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGL 261
K SV N+L ++Y+ G++N A + F+ +K ++SWT++I A ++G + +
Sbjct: 437 KAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAI 496
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F +MLS G++P+ T + S C
Sbjct: 497 NLFERMLSVGMKPDHITYVGVLSAC----------------------------------- 521
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
GLV++ +K ++ M+ V+ + ++ +A M+ DL G + +F + S
Sbjct: 522 THVGLVEQGRKYYNMMTEVHEI--EPTLSHYACMI-----DLYGRAGLLQEAYLF--IES 572
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV---VVGTALVNMYKKCGR 438
++PD + S+L C + + + + + L D AL N+Y CG+
Sbjct: 573 MPIEPDNIAWGSLLASCK----IHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGK 628
Query: 439 IERASRVFVEMSTRTL-----ISW 457
E A++ M R + ISW
Sbjct: 629 WENAAQTRKLMKDRGVRKEKGISW 652
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/696 (34%), Positives = 392/696 (56%), Gaps = 20/696 (2%)
Query: 68 EGPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
G + ++V S+L+ C S + +H +VK G H D FV L+ +Y + G++
Sbjct: 116 RGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSL 175
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A+ +FD + +VVSW+++I Y ++ + A+ + DM P+ + + +
Sbjct: 176 ALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVL 235
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVG--NSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+ L ++LGK +HAYV++ + V +L +Y C +L A + F+ + + +++S
Sbjct: 236 AELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIIS 295
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
WT +I A +G+R F KML EG+ PNE T+ S+ CGT +L +G +H+ +
Sbjct: 296 WTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTL 355
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ G+ +L + + + +Y KCG V A+ +FD +L+ W+AMI+ +AQ
Sbjct: 356 RNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQ--------- 406
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+N EA IF + G++P+ T S+L IC++ +LE G+ IH+ K G D+
Sbjct: 407 --NNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
++ T+ V+MY CG I+ A R+F E + R + W +MI+GFA H AL+LFE+M
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GV PN +TF+GAL ACS++G++ E F M E+ P ++HY C++D+ R G ++E
Sbjct: 525 GVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDE 584
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A + IK M PN ++ F+A C+ H N++LG +AA+Q L L+P ++ +I+ S
Sbjct: 585 AHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYAS 644
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A RW DVA ++ ++E + + S I + ++ F D HP + ++++++DE+ EK
Sbjct: 645 ANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREK 704
Query: 664 AKCFGYKQQESFEL--TDEE---SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY S L D+E SA YHSEKLA+A+GL++T PI +VK+ +C DC
Sbjct: 705 LEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLISTAPGVPIRIVKNLRVCDDC 764
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
HN K+++ + REIIVRD R H F G C+C D+
Sbjct: 765 HNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDY 800
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 248/507 (48%), Gaps = 36/507 (7%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
+L+ + +H H +KT S+ + V + Y N + LI+
Sbjct: 55 NLNETQQLHGHFIKTSSNCSYRVPLAALESYSS-----------------NAAIHSFLIT 97
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y++N+ P A ++ M N + + L AC + S LG+++H +VVK
Sbjct: 98 SYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHG 157
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
D V N+L +YS GSL A F++I K+V+SW+T+I + +G + L M
Sbjct: 158 DVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMH 217
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA--SNLRVRNSIMYLYLKCGL 326
++P+E + SI+ V + L++G +H+ ++ G S + + +++ +Y+KC
Sbjct: 218 VMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+ A+++FDG+S ++++W AMIA + +L E + +F K+ GM P
Sbjct: 278 LAYARRVFDGLSKASIISWTAMIAAYIHCNNL-----------NEGVRLFVKMLGEGMFP 326
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ T S++ C ALE G+ +HA TL+ GF +V+ TA ++MY KCG + A VF
Sbjct: 327 NEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVF 386
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
++ L+ W++MI+ +A ++ +A +F M G+RPN+ T V L C+ AG +
Sbjct: 387 DSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLE 446
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIA 565
+ K+ IK M +DM+ G I+ A F + D + + +W+ I+
Sbjct: 447 MGKWIHSYIDKQ-GIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS--MWNAMIS 503
Query: 566 GCRRHGNMELGFYAAEQL--LKLKPKD 590
G HG+ E E++ L + P D
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPND 530
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 7/323 (2%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
K +S+ + I N +E VR + +L EG + +SL++EC +L
Sbjct: 290 KASIISWTAMIAAYIHCNNLNEGVRLF-----VKMLGEGMFPNEITMLSLVKECGTAGAL 344
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+++HA ++ G + T +++YGKCG++ A+ VFD+ +++ W+++IS Y
Sbjct: 345 ELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSY 404
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
QN+ + A +F+ M G P T+ + L C+ S+ +GK IH+Y+ K + D
Sbjct: 405 AQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDM 464
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
+ S +Y+ CG +++A + F ++++ W +I +G L F +M +
Sbjct: 465 ILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEAL 524
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
G+ PN+ T C L+ G ++ H + + G+ + ++ L + GL+DE
Sbjct: 525 GVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDE 584
Query: 330 AQKLFDGMS-HVNLVTWNAMIAG 351
A +L M N+ + + +A
Sbjct: 585 AHELIKSMPMRPNIAVFGSFLAA 607
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/694 (34%), Positives = 394/694 (56%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ S+L ++ +L + +HA VK G FV L+N+Y KCG +E+
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF+ + ++VSW +L++G N A+ +F + T T T + C++
Sbjct: 255 AKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCAN 314
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTT 246
L+ + L +Q+H+ V+K+ +V +L YS CG L A+ F+ +NV+SWT
Sbjct: 315 LKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTA 374
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I C +NG+ + FS+M + + PNEFT +++ ++L ++ AQV IK
Sbjct: 375 IISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQV----IKTN 430
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V +++ Y K G ++A +F + ++V W+AM++ HAQ D
Sbjct: 431 YQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC-------- 482
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
G T +F+K+ G+KP+ +T SS++ C+ A ++QG Q HA+++K + + V
Sbjct: 483 EGAT---YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+ALV+MY + G I+ A VF + R L+SW SMI+G+A H S +A++ F M +G+
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ + VTF+ + C++ G+V E YF+ M +++KI P M+HY C++D++ R G ++E
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I+ M F ++W + CR H N+ELG ++A++LL L+P D +Y +L +I+ +AG
Sbjct: 660 SLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAG 719
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+W++ V+ L K+ + SWI+IK+KV+SF D HP S +I+K L ++ + K
Sbjct: 720 KWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLK 779
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY SF L D +E+ V HSE+LA+AFGL+ TP +P+ +VK+ +C DCH
Sbjct: 780 QDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHM 839
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+++ + REII+RD R H F G C+C DF
Sbjct: 840 VMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDF 873
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 247/505 (48%), Gaps = 18/505 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEE 127
G V +++ +L+ C + E +H VK G + + T LV++Y KCG++ E
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+VF+ +P+ NVV+WTSL++G + +F M G +P T + L+A +S
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ LG+++HA VK+ V NSL ++Y+ CG + A FN + ++++SW T+
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTL 273
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ N ++ L+ F + + + + T ++ +C + L + Q+HS +K G+
Sbjct: 274 MAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGF 333
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
V ++ Y KCG + +A +F + N+V+W A+I+G Q D+
Sbjct: 334 HLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPL------ 387
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
A+ +FS++ + P+ +T+S++L ++ QIHA +KT + VG
Sbjct: 388 -----AVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPSVG 438
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TAL+ Y K G E A +F + + +++W++M++ A A LF M + G++
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+ T + AC+ + F + +Y+ + L+ M+ R G I+ A
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA-Q 557
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + + + V W+ I+G +HG
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHG 582
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTAL 429
E L FS G+ D T S +L C + GEQ+H L +K G +V GT+L
Sbjct: 82 EVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSL 141
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V+MY KCG + VF M + +++WTS++TG A+ + + + LF M G+ PN
Sbjct: 142 VDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNP 201
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA--- 544
TF L+A ++ G + LG + + K ++C L++M+ + G +E+A
Sbjct: 202 FTFASVLSAVASQGAL--DLGQ-RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 545 FDFIKKMDFEPNEVIWSVFIAG 566
F++++ D V W+ +AG
Sbjct: 259 FNWMETRDM----VSWNTLMAG 276
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 251/698 (35%), Positives = 399/698 (57%), Gaps = 27/698 (3%)
Query: 72 VQTSSYVSLLQE----CVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVYGKCGNME 126
+ + SYV LL V + +HAH+++TG + + + LVN+Y K G +
Sbjct: 853 INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIA 912
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+A VF+ + + VSW SLISG QN E A FL M G+ P+N TL + L++C+
Sbjct: 913 DACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCA 972
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
SL I LG+QIH +K + D SV N+L +LY+ G +K F+ + E + +SW +
Sbjct: 973 SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNS 1032
Query: 247 VIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
VIGA ++ +V Q +++F +M+ G + T +I S ++ V Q+H+L +K
Sbjct: 1033 VIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKY 1092
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLS 364
+ + + N+++ Y KCG ++E +K+F MS + V+WN+MI+G+ L K
Sbjct: 1093 CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHK---- 1148
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
A+ + + G + D +TF+++L+ C+ + LE+G ++HA ++ SDVV
Sbjct: 1149 -------AMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVV 1201
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ALV+MY KCGRI+ ASR F M R + SW SMI+G+A H +AL+LF M+L G
Sbjct: 1202 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 1261
Query: 485 VRPNQVT-FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
P+ V +G L+ACS+ G V E +F+ M + Y++ P ++H+ C++D+ R G ++E
Sbjct: 1262 QPPDHVAPLLGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDE 1321
Query: 544 AFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
DFI M +PN +IW +V A CR +G N ELG AAE LL+L+P++ +Y +L +++
Sbjct: 1322 VGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMY 1381
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S +WEDVA + +E + + SW+ +KD V+ F D LHP+ I+ L EL
Sbjct: 1382 ASGEKWEDVAKARXAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELN 1441
Query: 662 EKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + GY Q + L D E + YHSEK+A+AF L + PI ++K+ +C
Sbjct: 1442 RKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSAL-PIRIMKNLRVCG 1500
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ I+ + R+I++RDS R H F +G C+C D+
Sbjct: 1501 DCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDY 1538
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 219/429 (51%), Gaps = 30/429 (6%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +H +K G + F+ L+N+Y + G++ AQK+FD + N+V+W LISGY Q
Sbjct: 563 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 622
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC--SSLESIRLGKQIHAYVVKYQTEDDT 210
N +P+ A F DM+ AG P + G+AL AC S +LG QIH + K + D
Sbjct: 623 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682
Query: 211 SVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V N L S+Y +C S N A F+RI +N +SW ++I G+ V FS M
Sbjct: 683 VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742
Query: 270 EGI----QPNEFTLTS-ISSVCGTM-LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
EG+ +PNE+T S I++ C ++ L V Q+ + K G+ +L V ++++ + +
Sbjct: 743 EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-S 382
GL D+A+ +F+ M N+V+ N ++ G L G A +F ++
Sbjct: 803 FGLTDDAKNIFEQMGVRNVVSMNGLMVG-----------LVKQKQGEAAAKVFHEMKDLV 851
Query: 383 GMKPDLYTFSSILTICSRLVALEQ----GEQIHALTLKTGFLSD--VVVGTALVNMYKKC 436
G+ D Y +L+ S LE+ G ++HA ++TG L+D V +G LVNMY K
Sbjct: 852 GINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTG-LNDNKVAIGNGLVNMYAKS 908
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I A VF M + +SW S+I+G + S A + F M G P+ T + L
Sbjct: 909 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTL 968
Query: 497 AACSNAGMV 505
++C++ G +
Sbjct: 969 SSCASLGWI 977
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 60/438 (13%)
Query: 38 QRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI-- 95
Q S + +I +SE S + L ++ G + +++++L SLS E+
Sbjct: 1027 QVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAV---SSLSLHEVSH 1083
Query: 96 -IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQN 153
IHA ++K D + L++ YGKCG M E +K+F + + VSW S+ISGY+ N
Sbjct: 1084 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 1143
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
A+ + M++ G + T T L+AC+S+ ++ G ++HA ++ E D VG
Sbjct: 1144 ELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVG 1203
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
++L +YS CG ++ A + F + +NV SW ++I +G + L+ F++M+ +G
Sbjct: 1204 SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 1263
Query: 274 PNEFT-LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P+ L + S C + G V+E +
Sbjct: 1264 PDHVAPLLGVLSACSHV-----------------------------------GFVEEGFE 1288
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F MS V ++ + + M+DL G + + F +NS MKP++ +
Sbjct: 1289 HFKSMSEVYRLS--PRVEHFSCMVDLL-----GRAGKLDEVGDF--INSMPMKPNVLIWR 1339
Query: 393 SILTICSRLVA--LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
++L C R E G + + L+ + V L NMY + E ++ M
Sbjct: 1340 TVLGACCRANGRNTELGRRAAEMLLELE-PQNAVNYVLLANMYASGEKWEDVAKARXAMK 1398
Query: 451 TRTL-----ISWTSMITG 463
+ SW +M G
Sbjct: 1399 EAAVKKEAGCSWVTMKDG 1416
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 48/257 (18%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF S++ E+ ++H ++K GF+ ++ + L+N+Y + G + A ++F EM
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
S R L++W +I+G+ + +A F DM+ AG PN F AL AC +G L
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665
Query: 510 G-------------------------YFEMMQKEYKIKPVMDH--------YMCLIDMFV 536
G Y + + V D + +I ++
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725
Query: 537 RLGCIEEAFDFIKKMD-------FEPNEVIW-SVFIAGCRRHGNMELGFYAAEQLLKLKP 588
R G A+D M F+PNE + S+ A C +++ G EQ+L
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAAC---SSVDFGLCVLEQML---- 778
Query: 589 KDCESYAMLLDIFVSAG 605
E L D++V +
Sbjct: 779 ARVEKSGFLQDLYVGSA 795
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/703 (33%), Positives = 398/703 (56%), Gaps = 21/703 (2%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL++ L G + ++ +L+ C L+ +H H+++ G D V+
Sbjct: 176 FDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNA 235
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCG++ A+ VFD +PR + +SW ++ISGY +N + +F M E P
Sbjct: 236 LITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPD 295
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ + ++AC +L RLG+++H YV+K + SV NSL ++S+ G + A F+
Sbjct: 296 LMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFS 355
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ K+++SWT +I +NG + + ++ M EG+ P+E T+ S+ S C + L
Sbjct: 356 KMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDK 415
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H + G S + V NS++ +Y KC +D+A ++F + + N+++W ++I G
Sbjct: 416 GIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG--- 472
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L + EAL F ++ S +KP+ T S+L+ C+R+ AL G++IHA
Sbjct: 473 --------LRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHA 523
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
L+TG D + AL++MY +CGR+E A F + + SW ++TG+A A+
Sbjct: 524 LRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF-NSCEKDVASWNILLTGYAQQGKGGLAV 582
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LF M+ + V P+++TF L ACS +GMV + L YFE M+ ++ I P + HY ++D+
Sbjct: 583 ELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL 642
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G +E+A++FIKKM +P+ IW + CR + N+ELG AA+ + ++ K Y
Sbjct: 643 LGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYY 702
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ +G+W++VA V+ + RE +L+ SW+ + +V++F D HPQ EI
Sbjct: 703 ILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEIN 762
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEES--ASVY--HSEKLAIAFGLLNTPIVSPILVVK 710
VL+ EK + G + D ++ A ++ HSE+LAIAFGL+NT +PI V K
Sbjct: 763 AVLEGFYEKMEATGLSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTK 822
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
+ MC +CHN +K I+ + R I VRD+++ H F +G C+C D
Sbjct: 823 NLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 293/577 (50%), Gaps = 56/577 (9%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V+ +Y++LL+ C +++ S +H+++ KT + + L++++ + G++ EA V
Sbjct: 92 VEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYV 151
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + ++ SW L+ GY + + A++++ ML G P T L C L +
Sbjct: 152 FGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDL 211
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+++H +V++Y E D V N+L ++Y CG + SA F+R+ ++ +SW +I
Sbjct: 212 ARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGY 271
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
EN ++GLR F M + P+ T+TS+ S C + R+G +VH IK G+ + +
Sbjct: 272 FENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEV 331
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ ++ G DEA+ +F M +LV+W AMI+G+ + NG E
Sbjct: 332 SVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK------------NGLPE 379
Query: 372 -ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
A+ ++ + G+ PD T +S+L+ C+ L L++G +H +TG S V+V +L+
Sbjct: 380 KAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLI 439
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KC I++A VF + + +ISWTS+I G + S +AL F+ M+L+ ++PN V
Sbjct: 440 DMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSV 498
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAF--- 545
T V L+AC+ G + + G E+ + D ++ L+DM+VR G +E A+
Sbjct: 499 TLVSVLSACARIGAL--SCGK-EIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQF 555
Query: 546 ---------------------------DFIKKM---DFEPNEVIWSVFIAGCRRHGNMEL 575
+ KM D P+E+ ++ + C R G +
Sbjct: 556 NSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTD 615
Query: 576 G---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + E + P + + YA ++D+ AGR ED
Sbjct: 616 GLEYFESMEHKFHIAP-NLKHYASVVDLLGRAGRLED 651
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 19/320 (5%)
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + L M + E T ++ +C + G++VHS K +R+
Sbjct: 73 GDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLG 132
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ ++++ G + EA +F M+ +L +WN ++ G+A+ EAL+
Sbjct: 133 NALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYF-----------DEALN 181
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
++ ++ G++PD+YTF +L C L L +G ++H ++ GF SDV V AL+ MY
Sbjct: 182 LYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYV 241
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A VF M R ISW +MI+G+ + + + L+LF M V P+ +T
Sbjct: 242 KCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTS 301
Query: 495 ALAACSNAG---MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
++AC G + E GY +++ + + +++ LI M +GC +EA KM
Sbjct: 302 VISACEALGDERLGREVHGY--VIKTGFVAEVSVNN--SLIQMHSSVGCWDEAEMVFSKM 357
Query: 552 DFEPNEVIWSVFIAGCRRHG 571
+F+ + V W+ I+G ++G
Sbjct: 358 EFK-DLVSWTAMISGYEKNG 376
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 228/691 (32%), Positives = 383/691 (55%), Gaps = 22/691 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V SY L + C +SLS+ ++H + + + ++ +Y +CG++E+A
Sbjct: 76 GVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDA 135
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
K+FD + +N VS T++IS Y + + A+ +F MLE+G+ P + T L + +
Sbjct: 136 DKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNP 195
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ +G+QIHA+V++ + S+ + ++Y CG L A + F+++ K ++WT ++
Sbjct: 196 RALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLM 255
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G A L+ F +++EG++ + F + + C ++ LR G Q+H+ KLG
Sbjct: 256 VGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLE 315
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V ++ Y+KC + A + F + N V+W+A+I+G+ QM
Sbjct: 316 CEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQF---------- 365
Query: 369 GTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ F L S + + + +T++SI CS L G Q+HA +K + +
Sbjct: 366 -EEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES 424
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+ MY KCG ++ A VF M +++WT+ I+G A + + +AL+LFE M+ G++P
Sbjct: 425 ALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKP 484
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N VTF+ L ACS+AG+V + Y + M ++Y + P +DHY C+ID++ R G ++EA F
Sbjct: 485 NSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRF 544
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
+K M FEP+ + W F++GC H N+ELG A E+L +L P+D Y + +++ AG+W
Sbjct: 545 MKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKW 604
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
E+ A V L E L + SWI+ K K++ F D HPQS EI++ L E
Sbjct: 605 EEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQSQEIYEKLKEFD------ 658
Query: 668 GYKQQESFE--LTDEESASVYHSEKLAIAFGLL--NTPIVSPILVVKSTTMCRDCHNFIK 723
G+ + + F+ +T+ + HSE+LAIAFGL+ N +PI V K+ C DCH F K
Sbjct: 659 GFMEGDMFQCSMTERREQLLDHSERLAIAFGLISVNGNARAPIKVFKNLRACPDCHEFAK 718
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ +T EI++RDS+R H F G C+C D+
Sbjct: 719 HVSLVTGHEIVIRDSRRFHHFKEGKCSCNDY 749
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 211/406 (51%), Gaps = 14/406 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G K +S Y +LL+ VN ++L IHAH+++ G + + T +VN+Y KCG
Sbjct: 173 MLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGW 232
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ A++VFD + V+WT L+ GY Q + A+ +F+D++ G + L A
Sbjct: 233 LVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKA 292
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SLE +R GKQIHA V K E + SVG L Y C S SA +AF IRE N +SW
Sbjct: 293 CASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSW 352
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ +I + + + ++ F + S+ + N FT TSI C + +G QVH+ I
Sbjct: 353 SAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAI 412
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K + ++++ +Y KCG +D+A ++F+ M + ++V W A I+GHA
Sbjct: 413 KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAY--------- 463
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSD 422
+ +EAL +F K+ S GMKP+ TF ++LT CS +EQG+ + + K
Sbjct: 464 --YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPT 521
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ ++++Y + G ++ A R M +SW ++G H
Sbjct: 522 IDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTH 567
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ ++TEG + + + +L+ C + + L + IHA + K G + V T LV+ Y KC
Sbjct: 272 VDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKC 331
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTA 181
+ E A + F + N VSW+++ISGY Q SQ E A+ F + N T +
Sbjct: 332 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSI 391
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
ACS L +G Q+HA +K ++L ++YS CG L+ A + F + ++
Sbjct: 392 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDI 451
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHS 300
++WT I G A + LR F KM+S G++PN T ++ + C + G + +
Sbjct: 452 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDT 511
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ K A + + ++ +Y + GL+DEA + M + ++W ++G
Sbjct: 512 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSG 563
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
Q+ +L LS H EA F +++ +G+ LY++ + C L +L G +H
Sbjct: 45 QGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLH 104
Query: 412 ALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
++ G + V++ ++ MY +CG +E A ++F EMS +S T+MI+ +A L
Sbjct: 105 N-RMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLL 163
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+A+ LF ML +G +P + L + N
Sbjct: 164 DKAVGLFSRMLESGDKPPSSMYTTLLKSLVN 194
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/728 (33%), Positives = 397/728 (54%), Gaps = 58/728 (7%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV--NVYGKC 122
VL E P ++ LL +C +S+ + IHAHI+KTG H F ++ L+ + +
Sbjct: 26 VLQEHPSLK------LLSKC---QSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRS 76
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++ A +F+++ N+ W S+I G + P LA+ F+ M+ +G P + T L
Sbjct: 77 GDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLL 136
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN-------- 234
+C+ L S GKQIHA+V+K D + SL ++Y+ G +N+A F+
Sbjct: 137 KSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAI 196
Query: 235 ----------------RIRE-------KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
R R+ K+V+SW +I + G + + L F M
Sbjct: 197 SFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKAN 256
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ PNE T+ S+ S C +L +G + S G SNL++ N+++ +Y KCG + A+
Sbjct: 257 VPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAR 316
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+LFD M ++++WN MI G+ M EAL++F ++ +SG++P TF
Sbjct: 317 ELFDDMLERDVISWNVMIGGYTHMCSY-----------KEALALFREMLASGVEPTEITF 365
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
SIL C+ L A++ G+ IHA K + T+L+++Y KCG I A +VF M
Sbjct: 366 LSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKI 425
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
++L SW +MI G A H + +A +LF M G+ PN++TFVG L+AC +AG+V +
Sbjct: 426 KSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQF 485
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F M ++YKI P HY C+ID+ R G EEA ++ M+ +P+ IW + CR HG
Sbjct: 486 FSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHG 545
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
+ELG AE+L +L+P + +Y +L +I+ AG+W+DVA ++ + + + + I
Sbjct: 546 RVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTI 605
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVY 686
+ + V+ F D +HPQS +I+++L+E+ E+ K FG+ S L D +E A +
Sbjct: 606 EVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSH 665
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLAIAFGL++T +PI ++K+ +CR+CH+ K+I+ + REII RD R H F +
Sbjct: 666 HSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKD 725
Query: 747 GHCTCRDF 754
G C+C D+
Sbjct: 726 GSCSCNDY 733
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 7/230 (3%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL++ E G + +++S+L C + ++ + IHA+I K + + T
Sbjct: 343 YKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS 402
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCGN+ A++VFD + ++ SW ++I G + Q + A +F M G P
Sbjct: 403 LIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPN 462
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T L+AC + LG+Q + +V+ Y+ + + L G A
Sbjct: 463 EITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLL 522
Query: 234 NRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+ K + W +++GAC ++G G ++ E P + L S
Sbjct: 523 QNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLS 572
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/694 (34%), Positives = 394/694 (56%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ S+L ++ +L + +HA VK G FV L+N+Y KCG +E+
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF+ + ++VSW +L++G N A+ +F + T T T + C++
Sbjct: 255 AKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCAN 314
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTT 246
L+ + L +Q+H+ V+K+ +V +L YS CG L A+ F+ +NV+SWT
Sbjct: 315 LKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTA 374
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I C +NG+ + FS+M + + PNEFT +++ ++L ++ AQV IK
Sbjct: 375 IISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQV----IKTN 430
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V +++ Y K G ++A +F + ++V W+AM++ HAQ D
Sbjct: 431 YQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDC-------- 482
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
G T +F+K+ G+KP+ +T SS++ C+ A ++QG Q HA+++K + + V
Sbjct: 483 EGAT---YLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICV 539
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+ALV+MY + G I+ A VF + R L+SW SMI+G+A H S +A++ F M +G+
Sbjct: 540 SSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGI 599
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ + VTF+ + C++ G+V E YF+ M +++KI P M+HY C++D++ R G ++E
Sbjct: 600 QMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETM 659
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I+ M F ++W + CR H N+ELG ++A++LL L+P D +Y +L +I+ +AG
Sbjct: 660 SLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAG 719
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+W++ V+ L K+ + SWI+IK+KV+SF D HP S +I+K L ++ + K
Sbjct: 720 KWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLK 779
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY SF L D +E+ V HSE+LA+AFGL+ TP +P+ +VK+ +C DCH
Sbjct: 780 QDGYSPNTSFVLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHM 839
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+++ + REII+RD R H F G C+C DF
Sbjct: 840 VMKMVSMIEDREIIMRDCSRFHHFNGGACSCGDF 873
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 247/505 (48%), Gaps = 18/505 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEE 127
G V +++ +L+ C + E +H VK G + + T LV++Y KCG++ E
Sbjct: 94 GVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCE 153
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+VF+ +P+ NVV+WTSL++G + +F M G +P T + L+A +S
Sbjct: 154 GIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVAS 213
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ LG+++HA VK+ V NSL ++Y+ CG + A FN + ++++SW T+
Sbjct: 214 QGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTL 273
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ N ++ L+ F + + + + T ++ +C + L + Q+HS +K G+
Sbjct: 274 MAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGF 333
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
V ++ Y KCG + +A +F + N+V+W A+I+G Q D+
Sbjct: 334 HLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPL------ 387
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
A+ +FS++ + P+ +T+S++L ++ QIHA +KT + VG
Sbjct: 388 -----AVVLFSRMREDRVMPNEFTYSAMLKASLSILP----PQIHAQVIKTNYQHIPFVG 438
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TAL+ Y K G E A +F + + +++W++M++ A A LF M + G++
Sbjct: 439 TALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIK 498
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+ T + AC+ + F + +Y+ + L+ M+ R G I+ A
Sbjct: 499 PNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA-Q 557
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + + + V W+ I+G +HG
Sbjct: 558 IVFERQTDRDLVSWNSMISGYAQHG 582
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 13/202 (6%)
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTAL 429
E L FS G+ D T S +L C + GEQ+H L +K G +V GT+L
Sbjct: 82 EVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSL 141
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V+MY KCG + VF M + +++WTS++TG A+ + + + LF M G+ PN
Sbjct: 142 VDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNP 201
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA--- 544
TF L+A ++ G + LG + + K ++C L++M+ + G +E+A
Sbjct: 202 FTFASVLSAVASQGAL--DLGQ-RVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 545 FDFIKKMDFEPNEVIWSVFIAG 566
F++++ D V W+ +AG
Sbjct: 259 FNWMETRDM----VSWNTLMAG 276
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/657 (32%), Positives = 381/657 (57%), Gaps = 27/657 (4%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K ++ A ++F ++P +VVSW +IS ++ + A+ + +DM G P + T
Sbjct: 235 YAKSHGVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTY 294
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
++LTAC+ L S+ GKQ+H V++ D V +++ LY+ CG A + F+ +R+
Sbjct: 295 TSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRD 354
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N +SWT +IG + G + + F++M +E + ++F L ++ S C + + +G+Q+
Sbjct: 355 RNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQL 414
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HSL +K G+ + V NS++ +Y KCG + A+ +F+ M+ ++V+W MI ++Q+ ++
Sbjct: 415 HSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNI 474
Query: 359 AK-----DDLSA---------------HNGGTEALSIFSK-LNSSGMKPDLYTFSSILTI 397
AK DD+S H + L ++S L + PD T+ ++
Sbjct: 475 AKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRG 534
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ + A + G+QI T+K G + D V A++ MY KCGRI A + F +S + L+SW
Sbjct: 535 CADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSW 594
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+MITG++ H + QA+++F+D+L G +P+ +++V L+ CS++G+V E YF+MM++
Sbjct: 595 NAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKR 654
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
++ I P ++H+ C++D+ R G + EA + I +M +P +W ++ C+ HGN +L
Sbjct: 655 DHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAE 714
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AA+ L L Y +L ++ AG+ +D A V+ L R++ + ++ +SW+ + ++V
Sbjct: 715 LAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRV 774
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGL 697
+ FK D HPQ I + LDEL+EK GY + ES + ++HSEKLA+AFG+
Sbjct: 775 HVFKAEDVSHPQVIAIREKLDELMEKIAHLGYVRTES------PRSEIHHSEKLAVAFGI 828
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ P PI ++K+ +C DCH IK+I+++T RE ++RD R H F G C+C D+
Sbjct: 829 MSLPAWMPIHIMKNLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCMDY 885
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/599 (24%), Positives = 266/599 (44%), Gaps = 119/599 (19%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTG----------------------------- 104
T + L+ C R +L+ A +H+ ++ G
Sbjct: 25 TQALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLR 84
Query: 105 ---SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
+ + ++N Y K G++ +A ++F +P +V SW +++SGY Q+ Q A+
Sbjct: 85 DEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALD 144
Query: 162 VFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F+ M + G+ P T G + +C +L + Q+ + K+ ++DD V +L +
Sbjct: 145 IFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDML 204
Query: 221 STCGSLNSAIKAFNRIR-------------------------------EKNVMSWTTVIG 249
CG+++ A K F+RI+ E++V+SW VI
Sbjct: 205 VRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVIS 264
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A ++G + L M +G++P+ T TS + C + SL G Q+H I+
Sbjct: 265 ALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHI 324
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V ++++ LY KCG EA+++F + N V+W +I G Q +
Sbjct: 325 DPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQ-----------YGCF 373
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+E++ +F+++ + M D + +++++ C + + G Q+H+L LK+G VVV +L
Sbjct: 374 SESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSL 433
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA------------------------ 465
++MY KCG ++ A +F M+ R ++SWT MIT ++
Sbjct: 434 ISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWN 493
Query: 466 -------NHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
H L+++ DML V P+ VT+V C++ G LG +++
Sbjct: 494 AMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGA--NKLGD-QIIGH 550
Query: 518 EYKIKPVMDHYM--CLIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
K+ ++D + +I M+ + G I E AFDF+ + D V W+ I G +HG
Sbjct: 551 TVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDL----VSWNAMITGYSQHG 605
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 219/446 (49%), Gaps = 49/446 (10%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ + G + +++Y S L C SL + +H +++ H D +V + +
Sbjct: 273 REALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAM 332
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +Y KCG +EA++VF +L N VSWT LI G++Q ++ +F M
Sbjct: 333 VELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQ 392
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C + I LG Q+H+ +K V NSL S+Y+ CG+L +A FN
Sbjct: 393 FALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNF 452
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ E++++SWT +I GA ++G GL+ +
Sbjct: 453 MAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEEDGLKMY 512
Query: 265 SKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
S ML+E + P+ T ++ C + + ++G Q+ +K+G + V N+++ +Y K
Sbjct: 513 SDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSK 572
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EA+K FD +S +LV+WNAMI G++Q H G +A+ IF + + G
Sbjct: 573 CGRISEARKAFDFLSRKDLVSWNAMITGYSQ-----------HGMGKQAIEIFDDILNKG 621
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCGRIERA 442
KPD ++ ++L+ CS +E+G+ + + +S + + +V++ + G + A
Sbjct: 622 AKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEA 681
Query: 443 SRVFVEMSTR-TLISWTSMITGFANH 467
+ EM + T W ++++ H
Sbjct: 682 KNLIDEMPMKPTAEVWGALLSACKTH 707
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 195/428 (45%), Gaps = 32/428 (7%)
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
TE + N + + Y+ GSL+ A++ F R+ ++V SW T++ ++G+ + L F
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 266 KMLSEGIQ-PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
M G PN FT + CG + V Q+ L K + V+ +++ + ++C
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRC 207
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--------------------MMDLAKDDLS 364
G +D A K F + + ++ N+M+ G+A+ ++ LS
Sbjct: 208 GAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISALS 267
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
EAL + ++ G++PD T++S LT C+RL +LE G+Q+H ++ D
Sbjct: 268 KSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPY 327
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +A+V +Y KCG + A RVF + R +SWT +I GF + ++++LF M
Sbjct: 328 VASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAEL 387
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ +Q ++ C N + + K + V+ LI M+ + G ++ A
Sbjct: 388 MAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN-SLISMYAKCGNLQNA 446
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
F+F+ + D V W+ I + GN+ A E + ++ ++ +L +
Sbjct: 447 ELIFNFMAERDI----VSWTGMITAYSQVGNIA---KAREFFDDMSTRNVITWNAMLGAY 499
Query: 602 VSAGRWED 609
+ G ED
Sbjct: 500 IQHGAEED 507
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 41/317 (12%)
Query: 5 PWAAAAACTLETKS---RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQE 61
P+ A+A L K ++ ++L+D+N +VS+ +Q SE V
Sbjct: 326 PYVASAMVELYAKCGCFKEAKRVFSSLRDRN-SVSWTVLIGGFLQYGCFSESVELFNQMR 384
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A E V + +L+ C N + +H+ +K+G + V L+++Y K
Sbjct: 385 A-----ELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAK 439
Query: 122 CGNME-------------------------------EAQKVFDNLPRINVVSWTSLISGY 150
CGN++ +A++ FD++ NV++W +++ Y
Sbjct: 440 CGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAY 499
Query: 151 VQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+Q+ E + ++ DML E P VT T C+ + + +LG QI + VK D
Sbjct: 500 IQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILD 559
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
TSV N++ ++YS CG ++ A KAF+ + K+++SW +I ++G Q + F +L+
Sbjct: 560 TSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILN 619
Query: 270 EGIQPNEFTLTSISSVC 286
+G +P+ + ++ S C
Sbjct: 620 KGAKPDYISYVAVLSGC 636
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV+L + C + + + I H VK G D V+ ++ +Y KCG + EA+K FD L
Sbjct: 527 TYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFL 586
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
R ++VSW ++I+GY Q+ + AI +F D+L G P ++ L+ CS + GK
Sbjct: 587 SRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGK 646
Query: 196 QIHAYVVKYQTEDDTSVG-NSLCSLYSTCGSLNSAIKAFNRIREKNVMS----WTTVIGA 250
Y + + + S G + G I+A N I E + W ++ A
Sbjct: 647 ---FYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSA 703
Query: 251 CGENG 255
C +G
Sbjct: 704 CKTHG 708
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 120/340 (35%), Gaps = 54/340 (15%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS------- 443
+ L C AL +H+ + G S V + L++ Y CG + A
Sbjct: 28 LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 444 -------------------------RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+F M TR + SW ++++G+ AL +F
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIFV 147
Query: 479 DMLLAGVR-PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M G PN TF + +C G AL ++ K + + D L+DM VR
Sbjct: 148 SMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSK-FDSQDDPDVQTALVDMLVR 206
Query: 538 LGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
G ++ A F IK P + + + G + ++ +A E + +D S+
Sbjct: 207 CGAMDFASKQFSRIKN----PTIICRNSMLVGYAKSHGVD---HALEIFKSMPERDVVSW 259
Query: 595 AMLLDIFVSAGRWEDV--AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
M++ +GR + VV + + T S + ++ S + LH Q
Sbjct: 260 NMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIR 319
Query: 653 IFKVLD--------ELVEKAKCFGYKQQESFELTDEESAS 684
+D EL K CF ++ L D S S
Sbjct: 320 NLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVS 359
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 247/718 (34%), Positives = 409/718 (56%), Gaps = 29/718 (4%)
Query: 54 VRSLGFQEALSVLTE---GPKVQTSSYVSLLQECVNRKSLSNAEI----IHAHIVKTGS- 105
VR +EA+ + E ++ +SY+ +L L N + +HA ++++G
Sbjct: 361 VRQKRGEEAVELFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLL 420
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+ + L+N+Y KCG + +A VF + + V+W S+I+G QN Q A+ F +
Sbjct: 421 NAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQE 480
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M YP+N T+ +AL++C+SL I +G+Q+H +K + D SV N+L +LY CG
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY 540
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEA-VQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ KAF+ + + + +SW ++IGA ++ + ++ + F M+ G PN T +I +
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILA 600
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLV 343
++ +G Q+H+L +K A++ + N+++ Y KCG + + +F MS + V
Sbjct: 601 AVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEV 660
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WN+MI+G+ L K A+ + + G + D +TF+++L+ C+ +
Sbjct: 661 SWNSMISGYIHNELLPK-----------AMDMVWFMMQKGQRLDGFTFATVLSACATVAT 709
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
LE+G ++H +++ SD+V+G+ALV+MY KCGRI+ ASR F M R L SW SMI+G
Sbjct: 710 LERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISG 769
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+A H ++L LF M L G P+ VTFVG L+ACS+AG+V E +F+ M + Y + P
Sbjct: 770 YARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAP 829
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAE 581
M+H+ C++D+ R+G + + DF+ +M +PN +IW +V A CR +G N LG AAE
Sbjct: 830 RMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAE 889
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
LL+++P + +Y +L +++ S G+W+DVA + R+ + + SW+ +KD V+ F
Sbjct: 890 MLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFV 949
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFG 696
D HP+ I++ L EL K + GY + F L D E S YHSEK+A+AF
Sbjct: 950 AGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLEGESKEELLSYHSEKIAVAF- 1008
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+L P PI ++K+ +C DCH+ K I+ + R+I++RDS R H F NG C+C DF
Sbjct: 1009 VLTRPSKMPIRILKNLRVCGDCHSAFKYISQIVERQIVLRDSNRFHHFENGKCSCGDF 1066
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 226/429 (52%), Gaps = 28/429 (6%)
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
+AE +H + K G D F+ L+N+Y + G++ +KVFD +P N+VSW+ LISGY
Sbjct: 91 DAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYT 150
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL--ESIRLGKQIHAYVVKYQTEDD 209
+N P A +F M+ G P + G+ + AC ++ G QIH + K Q +D
Sbjct: 151 RNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVND 210
Query: 210 TSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM- 267
+ N L S+Y G ++ A +AF+ I +N++S ++I + G+AV FS M
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270
Query: 268 ---LSEGIQPNEFTLTS-ISSVCGTMLS-LRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
+ +G++PNE+T S IS+ C S L + Q+ + K G+ +L V ++++ +
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFA 330
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NS 381
K G + A+ +F MS+ N+V+ N +I G L G EA+ +F ++ +S
Sbjct: 331 KAGSIGYAKNIFQKMSYRNVVSLNGLIIG-----------LVRQKRGEEAVELFMEMKDS 379
Query: 382 SGMKPDLYTFSSILTICSRLVALE----QGEQIHALTLKTGFL-SDVVVGTALVNMYKKC 436
+ P+ Y ILT LE +G ++HA +++G L + + +G L+NMY KC
Sbjct: 380 VELNPNSYMI--ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I A VF M + ++W SMITG + +A++ F++M + P+ T + AL
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISAL 497
Query: 497 AACSNAGMV 505
++C++ G +
Sbjct: 498 SSCASLGWI 506
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 246/727 (33%), Positives = 393/727 (54%), Gaps = 56/727 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ-- 129
+Q ++ +LL+ C+ ++ L +I+HA K+ ++ +Y KCG++ AQ
Sbjct: 7 LQLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTS 66
Query: 130 -----------------------------KVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+VFD +P+ ++VS+ +LI+ Y + +
Sbjct: 67 FHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTL 126
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F ++ E TL +TAC + + L +Q+H +VV + SV N++ + Y
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACG--DDVGLVRQLHCFVVVCGHDCYASVNNAVLACY 184
Query: 221 STCGSLNSAIKAFNRIRE---KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
S G L+ A + F + E ++ +SW +I ACG++ E ++ + F +M+ G++ + F
Sbjct: 185 SRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMF 244
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC-GLVDEAQKLFDG 336
T+ S+ + + L G Q H + IK G+ N V + ++ LY KC G + E +K+F+
Sbjct: 245 TMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEE 304
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
++ +LV WN MI+G + DL++D L F ++ +G +PD +F + +
Sbjct: 305 ITAPDLVLWNTMISGFSLYEDLSED----------GLWCFREMQRNGFRPDDCSFVCVTS 354
Query: 397 ICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
CS L + G+Q+HAL +K+ + V V ALV MY KCG + A RVF M +
Sbjct: 355 ACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTV 414
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
S SMI G+A H + ++L+LFE ML + PN +TF+ L+AC + G V E YF MM
Sbjct: 415 SLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMM 474
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
++ + I+P +HY C+ID+ R G ++EA I+ M F P + W+ + CR+HGN+EL
Sbjct: 475 KERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVEL 534
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
AA + L+L+P + Y ML +++ SA RWE+ A VK L RE + + SWI I
Sbjct: 535 AVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDK 594
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--------KQQESFELTDEESASVYH 687
KV+ F D HP EI + ++++K K GY + E E + E +YH
Sbjct: 595 KVHVFVAEDTSHPMIKEIHVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYH 654
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLA+AFGL++T PILVVK+ +C DCHN +K+I++LT REI VRD+ R H F G
Sbjct: 655 SEKLAVAFGLISTEEGVPILVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEG 714
Query: 748 HCTCRDF 754
HC+CRD+
Sbjct: 715 HCSCRDY 721
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 3/225 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC-G 123
++ G KV + S+L K L H ++K+G H + V + L+++Y KC G
Sbjct: 234 MVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAG 293
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGY-VQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
+M E +KVF+ + ++V W ++ISG+ + E + F +M G P + +
Sbjct: 294 SMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVT 353
Query: 183 TACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ACS+L S LGKQ+HA +K + SV N+L ++YS CG+++ A + F+ + E N
Sbjct: 354 SACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNT 413
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+S ++I ++G V+ LR F ML + I PN T ++ S C
Sbjct: 414 VSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSAC 458
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/686 (33%), Positives = 386/686 (56%), Gaps = 16/686 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + ++L+ C N K+L ++IH+ I+K G + F+ LV++Y KCG +A
Sbjct: 311 KCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIG 370
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF + + ++V W++LI+ Q Q E +I +F M P T+ + L+A ++ +
Sbjct: 371 VFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGN 430
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ G+ IHA V KY E D +V N+L ++Y G ++ K + + +++++SW +
Sbjct: 431 LQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSG 490
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G + L F ML EG PN +T SI C + + G QVH+ IK N
Sbjct: 491 LHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDN 550
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V +++ +Y KC +++A F+ +S +L TW +I +AQ N G
Sbjct: 551 NFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT-----------NQGE 599
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+AL+ F ++ G+KP+ +T + L+ CS L +LE G+Q+H++ K+G +SD+ VG+ALV
Sbjct: 600 KALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALV 659
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG +E A +F + R I+W ++I G+A + ++AL F ML G+ P+ V
Sbjct: 660 DMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGV 719
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF G L+ACS+ G+V E +F M +++ I P +DH C++D+ R+G +E DFI+K
Sbjct: 720 TFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQK 779
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M N +IW + + H N+ LG AA +L +L+P++ SY +L +IF + GRW+DV
Sbjct: 780 MQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDV 839
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V++L + + + SW+ +V++F +D HPQ EI LDEL + Y
Sbjct: 840 KRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYV 899
Query: 671 QQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ + L T+++ +HSE+LA+ F L++T I + K+ +CRDCH+ +K I
Sbjct: 900 PKTEYVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHI 959
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTC 751
+S+T +EI+VRD +R H F NG C+C
Sbjct: 960 SSITNQEIVVRDVRRFHHFKNGACSC 985
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 261/529 (49%), Gaps = 29/529 (5%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + Y S+L+EC +++SL A+ IH IVK + D + LVNVY KC A+
Sbjct: 109 KKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARL 168
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
V +P +VVSWT+LI G V +I++F +M G P TL T L ACS +
Sbjct: 169 VLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMA 228
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ LGKQ+HA K D VG++L LY+ CG + A K F + E+N ++W ++
Sbjct: 229 LDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNG 288
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G+ L+ F M+ ++ NEFTLT++ C +L+ G +HSL IK GY N
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ ++ +Y KCGL +A +F + ++V W+A+I L
Sbjct: 349 EFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITC-----------LDQQGQSE 397
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
E++ +F + P+ YT S+L+ + L+ G+ IHA K GF +DV V ALV
Sbjct: 398 ESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALV 457
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
MY K G + ++++ M R LISW + ++G + + + L +F ML G PN
Sbjct: 458 TMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMY 517
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMC--LIDMFVRLGCIEE--- 543
TF+ L +CS V ++ + IK +D +++C LIDM+ + +E+
Sbjct: 518 TFISILGSCSCLFDV-----HYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADV 572
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRR--HGNMELGFYAAEQLLKLKPKD 590
AF+ + D W+V I + G L ++ Q +KP +
Sbjct: 573 AFNRLSVRDL----FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNE 617
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 118/222 (53%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG +++S+L C + +HAHI+K + FV T L+++Y KC
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A F+ L ++ +WT +I+ Y Q +Q E A++ F M + G P TL L+
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSG 626
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CSSL S+ G+Q+H+ V K D VG++L +Y+ CG + A F + ++ ++W
Sbjct: 627 CSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAW 686
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
T+I +NG+ + L F ML EGI P+ T T I S C
Sbjct: 687 NTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSAC 728
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 6/212 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG K + L C + SL + +H+ + K+G D FV + LV++Y KCG MEE
Sbjct: 611 EGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEE 670
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ +F+ L R + ++W ++I GY QN Q A+ F ML+ G P VT L+ACS
Sbjct: 671 AEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSH 730
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EKNVMSW 244
+ GK+ H + +V + C + G + +++ +N + W
Sbjct: 731 QGLVEEGKE-HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIW 789
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
TV+GA + V G + +K+ +QP E
Sbjct: 790 ETVLGASKMHNNLVLGEKAANKLFE--LQPEE 819
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 238/685 (34%), Positives = 365/685 (53%), Gaps = 54/685 (7%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++Y+ LL+ C+ KSL+ A+ IH H +K S+ D V+ L +Y C + A+++FD
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P +V+ W +I Y N + AI ++ ML G P T L ACS L +I G
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+IH++ + E D V +L Y+ CG L A + F+ + ++V++W +I C
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ +M EGI PN T+ + C +L
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLY----------------------- 225
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
A+K+FD M N V+W+AMI G+ A + EAL
Sbjct: 226 ---------------ARKIFDVMGVRNEVSWSAMIGGYV-----------ASDCMKEALD 259
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF + SG+ PDL T +L CS L AL+ G H + GF +D ++ AL++MY
Sbjct: 260 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 319
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG+I A VF M ++SW +MI G+ H L +AL LF D+L G++P+ +TF+
Sbjct: 320 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 379
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L++CS++G+V E +F+ M +++ I P M+H +C++D+ R G I+EA FI+ M FE
Sbjct: 380 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 439
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ IWS ++ CR H N+ELG ++++ L P+ ++ +L +I+ +AGRW+D A ++
Sbjct: 440 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 499
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
++ L + SWI I V++F D H Q ++I + L+EL+ + K GY+ + S
Sbjct: 500 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 559
Query: 675 FELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F D +E +YHSEKLAIAFG+LN PILV K+ +C DCH IK +T +T
Sbjct: 560 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLIT 619
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REI VRD+ R H F NG C C DF
Sbjct: 620 KREITVRDANRFHHFKNGTCNCGDF 644
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 206/465 (44%), Gaps = 57/465 (12%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G + +Y +L+ C ++ + IH+H G D FV T LV+ Y KCG
Sbjct: 99 SMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCG 158
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ EAQ++F ++ +VV+W ++I+G + A+ + + M E G P + T+ L
Sbjct: 159 ILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLP 218
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C C LY A K F+ + +N +S
Sbjct: 219 TCQ------------------------------CLLY--------ARKIFDVMGVRNEVS 240
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W+ +IG + + L F M GI P+ T+ + C + +L+ G H I
Sbjct: 241 WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 300
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
G+A++ + N+++ +Y KCG + A+++F+ M ++V+WNAMI G+
Sbjct: 301 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYG---------- 350
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSD 422
H G EAL +F L + G+KPD TF +L+ CS + +G A++ +
Sbjct: 351 -IHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 409
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDM- 480
+ +V++ + G I+ A M + W+++++ H+ ++L E++
Sbjct: 410 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSA----CRIHKNIELGEEVS 465
Query: 481 -LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
+ + P L+ +A ++ + + QK++ +K +
Sbjct: 466 KKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 510
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/669 (35%), Positives = 386/669 (57%), Gaps = 22/669 (3%)
Query: 96 IHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+H + ++TG + V L+N+Y KCG+++ A+ VF + + VSW S+I+G QN
Sbjct: 124 VHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNK 183
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E A+ + M + G P+N L +AL++C+SL I LG+Q H +K + D SV N
Sbjct: 184 CFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSN 243
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV-QGLRFFSKMLSEGIQ 273
+L +LY+ L K F+ + E++ +SW TVIGA ++G +V + + F +M+ G
Sbjct: 244 TLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWS 303
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN T ++ + ++ + ++ Q+H+L +K + + N+++ Y K G ++ +++
Sbjct: 304 PNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEI 363
Query: 334 FDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F MS + V+WN+MI+G+ L K A+ + + G + D +TF+
Sbjct: 364 FSRMSERRDEVSWNSMISGYIHNELLCK-----------AMDLVWLMMQRGQRLDCFTFA 412
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++L+ C+ + LE G ++HA ++ SDVV+G+ALV+MY KCGRI+ ASR F M R
Sbjct: 413 TVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L SW SMI+G+A H AL+LF M L+G P+ +TFVG L+ACS+ G+V E YF
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYF 532
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG 571
+ M + Y + P ++HY C++D+ R G +++ +FI KM +PN +IW +V A CR +G
Sbjct: 533 KSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNG 592
Query: 572 -NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
ELG AAE L + P++ +Y +L +++ S G+WED+A + RE + + SW
Sbjct: 593 RKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSW 652
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
+ +KD V+ F D HP+ I+ L EL +K + GY Q F L D +E
Sbjct: 653 VTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLS 712
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
YHSEKLA+AF L + PI ++K+ +C DCH+ K I+ + R I++RDS R H F
Sbjct: 713 YHSEKLAVAFVLTRNSGL-PIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFE 771
Query: 746 NGHCTCRDF 754
+G C+CRD+
Sbjct: 772 DGKCSCRDY 780
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 245/489 (50%), Gaps = 25/489 (5%)
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
+A + H +++K G D F+ L+NVY + G+ A+K+FD +P N V+W LISGY
Sbjct: 18 DANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYT 77
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTED-D 209
QN PE A V +M+ G P G+A+ AC S+ R G+Q+H Y ++ D
Sbjct: 78 QNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK 137
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
+VGN L ++Y+ CG ++ A F + +K+ +SW ++I +N ++ ++ M
Sbjct: 138 VAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRK 197
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
G+ P+ F L S S C ++ + +G Q H GIKLG ++ V N+++ LY + + E
Sbjct: 198 TGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAE 257
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
QK+F M + V+WN +I LA S +EA+ +F ++ +G P+
Sbjct: 258 CQKVFSWMLERDQVSWNTVIGA------LADSGASV----SEAIEVFLEMMRAGWSPNRV 307
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF ++L S L + QIHAL LK D + AL+ Y K G +E +F M
Sbjct: 308 TFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRM 367
Query: 450 S-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA-----G 503
S R +SW SMI+G+ ++ L +A+ L M+ G R + TF L+AC+ G
Sbjct: 368 SERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECG 427
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
M A ++ + I L+DM+ + G I+ A F M N W+
Sbjct: 428 MEVHACAIRACLESDVVIGSA------LVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSM 480
Query: 564 IAGCRRHGN 572
I+G RHG+
Sbjct: 481 ISGYARHGH 489
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 201/389 (51%), Gaps = 17/389 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+S L C + + + H +K G D V L+ +Y + + E QKVF +
Sbjct: 208 ISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLE 267
Query: 138 INVVSWTSLISGYVQNSQPEL--AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ VSW ++I G + +S + AI VFL+M+ AG P VT L SSL + +L
Sbjct: 268 RDQVSWNTVI-GALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSH 326
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVIGACGEN 254
QIHA ++KY +DD ++ N+L + Y G + + + F+R+ E ++ +SW ++I N
Sbjct: 327 QIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHN 386
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + M+ G + + FT ++ S C T+ +L G +VH+ I+ S++ +
Sbjct: 387 ELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIRACLESDVVIG 446
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++++ +Y KCG +D A + F+ M NL +WN+MI+G+A+ H G AL
Sbjct: 447 SALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYAR-----------HGHGDNALR 495
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMY 433
+F+++ SG PD TF +L+ CS + +++G E ++T G + V + +V++
Sbjct: 496 LFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLL 555
Query: 434 KKCGRIERASRVFVEMSTR-TLISWTSMI 461
+ G +++ +M + ++ W +++
Sbjct: 556 GRAGELDKIENFINKMPIKPNILIWRTVL 584
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 172/409 (42%), Gaps = 53/409 (12%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ G ++++LL + + + IHA I+K D + L+ YGK
Sbjct: 295 LEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKS 354
Query: 123 GNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G ME +++F + R + VSW S+ISGY+ N A+ + M++ G T T
Sbjct: 355 GEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATV 414
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+++ ++ G ++HA ++ E D +G++L +YS CG ++ A + FN + +N+
Sbjct: 415 LSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNL 474
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW ++I +G LR F++M G P+ T + S C +
Sbjct: 475 YSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHI------------ 522
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
GLVDE + F M+ V + + ++ M+DL
Sbjct: 523 -----------------------GLVDEGFEYFKSMTEVYGLV--PRVEHYSCMVDLL-- 555
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA--LEQGEQIHALTLKTGF 419
G + + F +N +KP++ + ++L C R E G + +
Sbjct: 556 ---GRAGELDKIENF--INKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMD- 609
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISWTSMITG 463
+ V L NMY G+ E +R M + SW +M G
Sbjct: 610 PQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDG 658
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Cucumis sativus]
Length = 1037
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/682 (33%), Positives = 387/682 (56%), Gaps = 18/682 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + +L +H+H +K G D + L+++Y KC ++E A K F
Sbjct: 367 SLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETE 426
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
N+V W ++ Y Q + +F M G P T + L C+SL ++ LG+QIH
Sbjct: 427 NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+V+K + + V + L +Y+ G L A++ R+ E +V+SWT +I ++
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F +M GIQ + S S C + +LR G Q+H+ G+ ++L + N+++
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG + EA F+ + N ++WN++++G AQ EAL +F +
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYF-----------EEALQVFVR 655
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + + +++T+ S ++ + L ++QG+QIH++ LKTG+ S+ V +L+++Y K G
Sbjct: 656 MLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGS 715
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
I A R F +MS R +ISW +MITG++ H +AL+LFE+M + G+ PN VTFVG L+A
Sbjct: 716 ISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSA 775
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E L YFE M K + + P +HY+C++D+ R G ++ A ++IK+M + +
Sbjct: 776 CSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAM 835
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW ++ C H N+E+G AA LL+L+P+D +Y ++ +I+ + +W + L +
Sbjct: 836 IWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMK 895
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + + SWI +K+ V++F D LHP + +I++ + L + GY Q+SF L
Sbjct: 896 DRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYV-QDSFSLL 954
Query: 679 DE------ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
+E + + HSEKLAIAFGLL+ PI V+K+ +C DCHN+IK ++ ++ R
Sbjct: 955 NESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRS 1014
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
IIVRD+ R H F G C+C+DF
Sbjct: 1015 IIVRDAHRFHHFDGGVCSCKDF 1036
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 280/531 (52%), Gaps = 24/531 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L EG ++ +L+ CV + + + +H+ G V L+++Y K G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+E A+KVF+ + ++V+W ++ISG QN E AI +F DM + +PT L + L+
Sbjct: 210 YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
A + ++ LG+Q+H V+K+ +T V N L +LYS L SA + F+ + ++ +S
Sbjct: 270 ASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ ++I + G + + L F+KM + ++P+ T+ S+ S C ++ +L G Q+HS I
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G ++++ + S++ LY KC V+ A K F N+V WN M+ + Q+ D+L
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQL-----DNL 444
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
S ++ IF ++ GM P+ +T+ SIL C+ L AL GEQIH +KTGF +V
Sbjct: 445 S------DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 498
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V + L++MY K G++ A R+ + ++SWT+MI G+ H + +ALQLFE+M
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYR 558
Query: 484 GVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
G++ + + F A++AC+ G A Y + I LI ++ R
Sbjct: 559 GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNA------LISLYARC 612
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
G I+EA+ +K+ + N + W+ ++G + G E ++L+ + +
Sbjct: 613 GRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 254/525 (48%), Gaps = 23/525 (4%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G S+ ++ + F E G + +Y+ LL+ C+ SL +H I K+G +
Sbjct: 38 GKSKRIQLMNFME-----ERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
++ LV+ Y + G+ A KVFD +V SW +I +V +F ML
Sbjct: 93 PLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 169 AGNYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P T L AC + + KQ+H+ Y + V N L LYS G +
Sbjct: 153 EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
SA K FN I K++++W +I +NG + + F M + I P + L+S+ S
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ +G Q+H L IK G+ S V N ++ LY + + A+++F M+ + V++N+
Sbjct: 273 KIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+I+G Q AL +F+K+ +KPD T +S+L+ C+ + AL +G
Sbjct: 333 LISGLVQ-----------QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
Q+H+ +K G +D+++ +L+++Y KC +E A + F+ T ++ W M+ +
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQL 441
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+ ++F M + G+ PNQ T+ L C++ G +Y LG ++ K ++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY--LGE-QIHTHVIKTGFQLNV 498
Query: 528 YMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Y+C LIDM+ + G + A ++++ E + V W+ IAG +H
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 217/403 (53%), Gaps = 31/403 (7%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +Y S+L+ C + +L E IH H++KTG + +V + L+++Y K G +
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A ++ LP +VVSWT++I+GYVQ+ A+ +F +M G N+ +A++AC+
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++R G+QIHA D S+ N+L SLY+ CG + A AF +I +KN +SW ++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ ++G + L+ F +ML + N FT S S ++ +++ G Q+HS+ +K GY
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY 696
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S V NS++ LY K G + +A + F+ MS N+++WNAMI G++Q H
Sbjct: 697 DSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ-----------HG 745
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-------QIHALTLKTGFL 420
G EAL +F ++ G+ P+ TF +L+ CS + +++G +IH L K+
Sbjct: 746 CGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHY 805
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMST-------RTLIS 456
+V++ + G+++RA EM RTL+S
Sbjct: 806 ------VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EAL V L +V +Y S + + ++ + IH+ ++KTG + V
Sbjct: 646 FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y K G++ +A + F+++ NV+SW ++I+GY Q+ A+ +F +M G P
Sbjct: 706 LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT L+ACS + ++ G + + ++ D + G +A
Sbjct: 766 HVTFVGVLSACSHIGLVKEG--LDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAME 823
Query: 235 RIRE----KNVMSWTTVIGAC 251
I+E + M W T++ AC
Sbjct: 824 YIKEMPIPADAMIWRTLLSAC 844
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
L G ++ + + + + G++ + + +L C +L + ++H K+GF +
Sbjct: 33 LHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
++ +LV+ Y + G A +VF E S R++ SW MI F + Q LF ML
Sbjct: 93 PLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE-----YKIKPVMDHYMCLIDMFVR 537
G+ PN TF G L AC + A Y + + + P++ + LID++ +
Sbjct: 153 EGITPNGYTFAGVLKACVGGDI---AFNYVKQVHSRTFYYGFDSSPLVAN--LLIDLYSK 207
Query: 538 LGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G IE A F+ I D V W I+G ++G
Sbjct: 208 NGYIESAKKVFNCICMKDI----VTWVAMISGLSQNG 240
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/693 (32%), Positives = 387/693 (55%), Gaps = 18/693 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + +++ SL+ C +L + +HA+ K G + + L+N+Y KC ++E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A F NVV W ++ Y + +F M P T + L C
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + LG+QIH+ ++K + + V + L +Y+ G L++A R K+V+SWTT+
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + + L F +ML GI+ +E LT+ S C + +L+ G Q+H+ G+
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+S+L +N+++ LY +CG ++E+ F+ + + WNA+++G Q S +N
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ---------SGNN 673
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F ++N G+ + +TF S + S ++QG+Q+HA+ KTG+ S+ V
Sbjct: 674 --EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG I A + F+E+ST+ +SW ++I ++ H +AL F+ M+ + VRP
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N VT VG L+ACS+ G+V + + YFE M EY + P +HY+C++DM R G + A +F
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I++M +P+ ++W ++ C H NME+G +AA LL+L+P+D +Y +L +++ + +W
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 911
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ + + +E+ + + SWI +K+ ++SF D HP + EI + +L ++A
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Query: 668 GYKQQESFELTDE------ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY Q+ F L +E + HSEKLAI+FGLL+ P PI V+K+ +C DCH +
Sbjct: 972 GY-VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAW 1030
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK ++ ++ REIIVRD+ R H F G C+C+D+
Sbjct: 1031 IKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 256/484 (52%), Gaps = 19/484 (3%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E IHA I+ G V L+++Y + G ++ A++VFD L + SW ++ISG +N
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
AI +F DM G PT + L+AC +ES+ +G+Q+H V+K DT V
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L SLY G+L SA F+ + +++ +++ T+I + G + + F +M +G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ TL S+ C +L G Q+H+ KLG+ASN ++ +++ LY KC ++ A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F N+V WN M+ + + DL + IF ++ + P+ YT+ S
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDL-----------RNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL C RL LE GEQIH+ +KT F + V + L++MY K G+++ A + + + +
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SWT+MI G+ ++ +AL F ML G+R ++V A++AC AG+ +AL +
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC--AGL--QALKEGQ 611
Query: 514 MMQKEYKIKPV---MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ + + + L+ ++ R G IEE++ ++ + N + W+ ++G ++
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQS 670
Query: 571 GNME 574
GN E
Sbjct: 671 GNNE 674
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 248/499 (49%), Gaps = 19/499 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+L C +SL E +H ++K G D +V LV++Y GN+ A+ +F N+
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ + V++ +LI+G Q E A+ +F M G P + TL + + ACS+ ++ G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HAY K + + +L +LY+ C + +A+ F +NV+ W ++ A G
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ R F +M E I PN++T SI C + L +G Q+HS IK + N V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y K G +D A + + ++V+W MIAG+ Q +N +AL+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-----------YNFDDKALTT 578
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ G++ D ++ ++ C+ L AL++G+QIHA +GF SD+ ALV +Y +
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG+IE + F + I+W ++++GF + +AL++F M G+ N TF A
Sbjct: 639 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE- 554
+ A S + + ++ K + LI M+ + G I +A +K E
Sbjct: 699 VKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA----EKQFLEV 753
Query: 555 --PNEVIWSVFIAGCRRHG 571
NEV W+ I +HG
Sbjct: 754 STKNEVSWNAIINAYSKHG 772
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 250/515 (48%), Gaps = 23/515 (4%)
Query: 59 FQEAL--SVLTEGPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFL 115
FQE SV G + + LL+ C+ SL +H+ I+K G + + L
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ Y G++ A KVFD +P + +W +I + +F+ M+ P
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 176 VTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L AC + + +QIHA ++ D T V N L LYS G ++ A + F+
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+R K+ SW +I +N + +R F M GI P + +S+ S C + SL +
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H L +KLG++S+ V N+++ LY G + A+ +F MS + VT+N +I G
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING--- 363
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LS G +A+ +F +++ G++PD T +S++ CS L +G+Q+HA T
Sbjct: 364 --------LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K GF S+ + AL+N+Y KC IE A F+E ++ W M+ + +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LI 532
++F M + + PNQ T+ L C G + LG ++ + K ++ Y+C LI
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGE-QIHSQIIKTNFQLNAYVCSVLI 532
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAG 566
DM+ +LG ++ A+D + + F +V+ W+ IAG
Sbjct: 533 DMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAG 565
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 227/476 (47%), Gaps = 53/476 (11%)
Query: 170 GNYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P + TL L C S+ G+++H+ ++K + + + L Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-G 287
A K F+ + E+ + +W +I + F +M+SE + PNE T + + C G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ V Q+H+ + G + V N ++ LY + G VD A+++FDG+ + +W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G L+K++ A EA+ +F + G+ P Y FSS+L+ C ++ +LE G
Sbjct: 259 MISG------LSKNECEA-----EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQ+H L LK GF SD V ALV++Y G + A +F MS R +++ ++I G +
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGY------- 511
+A++LF+ M L G+ P+ T + ACS G ++ LG+
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 512 ---FEMMQKEYKIKPVMDHYM-------CLID-MFVRLGCIEE---AFDFIKKMDFE--- 554
+ K I+ +D+++ L + M V G +++ +F ++M E
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK----LKPKDCESYAMLLDIFVSAGR 606
PN+ + + C R G++ELG Q++K L C ++L+D++ G+
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC---SVLIDMYAKLGK 540
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + + C ++L + IHA +G D LV +Y +CG
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+EE+ F+ + ++W +L+SG+ Q+ E A+ VF+ M G N T G+A+ A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S +++ GKQ+HA + K + +T V N+L S+Y+ CGS++ A K F + KN +SW
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGI 303
+I A ++G + L F +M+ ++PN TL + S C + + G A S+
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
+ G + ++ + + GL+ A++ M + + W +++ ++ +
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 363 LSAHN 367
+AH+
Sbjct: 882 FAAHH 886
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 23/327 (7%)
Query: 269 SEGIQPNEFTLTSISSVC-GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ GI+PN TL + C T SL G ++HS +KLG SN + + YL G +
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
A K+FD M + TWN MI +L++ N E +F ++ S + P+
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIK-----------ELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 388 LYTFSSILTIC-SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
TFS +L C VA + EQIHA L G VV L+++Y + G ++ A RVF
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+ + SW +MI+G + + +A++LF DM + G+ P F L+AC
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI---- 301
Query: 507 EALGYFEMMQK-EYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E+L E + K+ D Y+C L+ ++ LG + A M + + V ++
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTL 360
Query: 564 IAGCRR--HGNMELGFYAAEQLLKLKP 588
I G + +G + + L L+P
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEP 387
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/682 (33%), Positives = 387/682 (56%), Gaps = 18/682 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + +L +H+H +K G D + L+++Y KC ++E A K F
Sbjct: 367 SLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETE 426
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
N+V W ++ Y Q + +F M G P T + L C+SL ++ LG+QIH
Sbjct: 427 NIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH 486
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+V+K + + V + L +Y+ G L A++ R+ E +V+SWT +I ++
Sbjct: 487 THVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFS 546
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F +M GIQ + S S C + +LR G Q+H+ G+ ++L + N+++
Sbjct: 547 EALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALI 606
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG + EA F+ + N ++WN++++G AQ EAL +F +
Sbjct: 607 SLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYF-----------EEALQVFVR 655
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + + +++T+ S ++ + L ++QG+QIH++ LKTG+ S+ V +L+++Y K G
Sbjct: 656 MLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGS 715
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
I A R F +MS R +ISW +MITG++ H +AL+LFE+M + G+ PN VTFVG L+A
Sbjct: 716 ISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSA 775
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E L YFE M K + + P +HY+C++D+ R G ++ A ++IK+M + +
Sbjct: 776 CSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAM 835
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW ++ C H N+E+G AA LL+L+P+D +Y ++ +I+ + +W + L +
Sbjct: 836 IWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMK 895
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + + SWI +K+ V++F D LHP + +I++ + L + GY Q+SF L
Sbjct: 896 DXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYV-QDSFSLL 954
Query: 679 DE------ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
+E + + HSEKLAIAFGLL+ PI V+K+ +C DCHN+IK ++ ++ R
Sbjct: 955 NESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKISNRS 1014
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
IIVRD+ R H F G C+C+DF
Sbjct: 1015 IIVRDAHRFHHFDGGVCSCKDF 1036
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 280/531 (52%), Gaps = 24/531 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L EG ++ +L+ CV + + + +H+ G V L+++Y K G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+E A+KVF+ + ++V+W ++ISG QN E AI +F DM + +PT L + L+
Sbjct: 210 YIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLS 269
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
A + ++ LG+Q+H V+K+ +T V N L +LYS L SA + F+ + ++ +S
Sbjct: 270 ASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVS 329
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ ++I + G + + L F+KM + ++P+ T+ S+ S C ++ +L G Q+HS I
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G ++++ + S++ LY KC V+ A K F N+V WN M+ + Q+ D+L
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQL-----DNL 444
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
S ++ IF ++ GM P+ +T+ SIL C+ L AL GEQIH +KTGF +V
Sbjct: 445 S------DSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNV 498
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V + L++MY K G++ A R+ + ++SWT+MI G+ H + +ALQLFE+M
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYR 558
Query: 484 GVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
G++ + + F A++AC+ G A Y + I LI ++ R
Sbjct: 559 GIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNA------LISLYARC 612
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
G I+EA+ +K+ + N + W+ ++G + G E ++L+ + +
Sbjct: 613 GRIQEAYLAFEKIG-DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAE 662
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 254/525 (48%), Gaps = 23/525 (4%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G S+ ++ + F E G + +Y+ LL+ C+ SL +H I K+G +
Sbjct: 38 GKSKRIQLMNFME-----ERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
++ LV+ Y + G+ A KVFD +V SW +I +V +F ML
Sbjct: 93 PLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 169 AGNYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P T L AC + + KQ+H+ Y + V N L LYS G +
Sbjct: 153 EGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIE 212
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
SA K FN I K++++W +I +NG + + F M + I P + L+S+ S
Sbjct: 213 SAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSAST 272
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ +G Q+H L IK G+ S V N ++ LY + + A+++F M+ + V++N+
Sbjct: 273 KIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNS 332
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+I+G Q AL +F+K+ +KPD T +S+L+ C+ + AL +G
Sbjct: 333 LISGLVQ-----------QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
Q+H+ +K G +D+++ +L+++Y KC +E A + F+ T ++ W M+ +
Sbjct: 382 MQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQL 441
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+ ++F M + G+ PNQ T+ L C++ G +Y LG ++ K ++
Sbjct: 442 DNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALY--LGE-QIHTHVIKTGFQLNV 498
Query: 528 YMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Y+C LIDM+ + G + A ++++ E + V W+ IAG +H
Sbjct: 499 YVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 217/403 (53%), Gaps = 31/403 (7%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +Y S+L+ C + +L E IH H++KTG + +V + L+++Y K G +
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLAL 516
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A ++ LP +VVSWT++I+GYVQ+ A+ +F +M G N+ +A++AC+
Sbjct: 517 ALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAG 576
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++R G+QIHA D S+ N+L SLY+ CG + A AF +I +KN +SW ++
Sbjct: 577 IRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSL 636
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ ++G + L+ F +ML + N FT S S ++ +++ G Q+HS+ +K GY
Sbjct: 637 VSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY 696
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S V NS++ LY K G + +A + F+ MS N+++WNAMI G++Q H
Sbjct: 697 DSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQ-----------HG 745
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-------QIHALTLKTGFL 420
G EAL +F ++ G+ P+ TF +L+ CS + +++G +IH L K+
Sbjct: 746 CGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHY 805
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMST-------RTLIS 456
+V++ + G+++RA EM RTL+S
Sbjct: 806 ------VCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLS 842
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
L G ++ + + + + G++ + + +L C +L + ++H K+GF +
Sbjct: 33 LHMEQGKSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
++ +LV+ Y + G A +VF E S R++ SW MI F + Q LF ML
Sbjct: 93 PLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLA 152
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE-----YKIKPVMDHYMCLIDMFVR 537
G+ PN TF G L AC + A Y + + + P++ + LID++ +
Sbjct: 153 EGITPNGYTFAGVLKACVGGDI---AFNYVKQVHSRTFYYGFDSSPLVAN--LLIDLYSK 207
Query: 538 LGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G IE A F+ I D V W I+G ++G
Sbjct: 208 NGYIESAKKVFNCICMKDI----VTWVAMISGLSQNG 240
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EAL V L +V +Y S + + ++ + IH+ ++KTG + V
Sbjct: 646 FEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNS 705
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y K G++ +A + F+++ NV+SW ++I+GY Q+ A+ +F +M G P
Sbjct: 706 LISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPN 765
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT L+ACS + ++ G + + ++ D + G +A
Sbjct: 766 HVTFVGVLSACSHIGLVKEG--LDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAME 823
Query: 235 RIRE----KNVMSWTTVIGAC 251
I+E + M W T++ AC
Sbjct: 824 YIKEMPIPADAMIWRTLLSAC 844
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/693 (32%), Positives = 387/693 (55%), Gaps = 18/693 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + +++ SL+ C +L + +HA+ K G + + L+N+Y KC ++E
Sbjct: 343 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 402
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A F NVV W ++ Y + +F M P T + L C
Sbjct: 403 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 462
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + LG+QIH+ ++K + + V + L +Y+ G L++A R K+V+SWTT+
Sbjct: 463 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 522
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + + L F +ML GI+ +E LT+ S C + +L+ G Q+H+ G+
Sbjct: 523 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 582
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+S+L +N+++ LY +CG ++E+ F+ + + WNA+++G Q S +N
Sbjct: 583 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ---------SGNN 633
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F ++N G+ + +TF S + S ++QG+Q+HA+ KTG+ S+ V
Sbjct: 634 --EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 691
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG I A + F+E+ST+ +SW ++I ++ H +AL F+ M+ + VRP
Sbjct: 692 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 751
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N VT VG L+ACS+ G+V + + YFE M EY + P +HY+C++DM R G + A +F
Sbjct: 752 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 811
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I++M +P+ ++W ++ C H NME+G +AA LL+L+P+D +Y +L +++ + +W
Sbjct: 812 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 871
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ + + +E+ + + SWI +K+ ++SF D HP + EI + +L ++A
Sbjct: 872 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 931
Query: 668 GYKQQESFELTDE------ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY Q+ F L +E + HSEKLAI+FGLL+ P PI V+K+ +C DCH +
Sbjct: 932 GYV-QDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAW 990
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK ++ ++ REIIVRD+ R H F G C+C+D+
Sbjct: 991 IKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1023
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 256/484 (52%), Gaps = 19/484 (3%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E IHA I+ G V L+++Y + G ++ A++VFD L + SW ++ISG +N
Sbjct: 167 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 226
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
AI +F DM G PT + L+AC +ES+ +G+Q+H V+K DT V
Sbjct: 227 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 286
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L SLY G+L SA F+ + +++ +++ T+I + G + + F +M +G++
Sbjct: 287 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 346
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ TL S+ C +L G Q+H+ KLG+ASN ++ +++ LY KC ++ A
Sbjct: 347 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F N+V WN M+ + + DL + IF ++ + P+ YT+ S
Sbjct: 407 FLETEVENVVLWNVMLVAYGLLDDL-----------RNSFRIFRQMQIEEIVPNQYTYPS 455
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL C RL LE GEQIH+ +KT F + V + L++MY K G+++ A + + + +
Sbjct: 456 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 515
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SWT+MI G+ ++ +AL F ML G+R ++V A++AC AG+ +AL +
Sbjct: 516 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC--AGL--QALKEGQ 571
Query: 514 MMQKEYKIKPV---MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ + + + L+ ++ R G IEE++ ++ + N + W+ ++G ++
Sbjct: 572 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQS 630
Query: 571 GNME 574
GN E
Sbjct: 631 GNNE 634
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 248/499 (49%), Gaps = 19/499 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+L C +SL E +H ++K G D +V LV++Y GN+ A+ +F N+
Sbjct: 250 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 309
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ + V++ +LI+G Q E A+ +F M G P + TL + + ACS+ ++ G+
Sbjct: 310 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 369
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HAY K + + +L +LY+ C + +A+ F +NV+ W ++ A G
Sbjct: 370 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 429
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ R F +M E I PN++T SI C + L +G Q+HS IK + N V +
Sbjct: 430 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 489
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y K G +D A + + ++V+W MIAG+ Q +N +AL+
Sbjct: 490 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-----------YNFDDKALTT 538
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ G++ D ++ ++ C+ L AL++G+QIHA +GF SD+ ALV +Y +
Sbjct: 539 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 598
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG+IE + F + I+W ++++GF + +AL++F M G+ N TF A
Sbjct: 599 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 658
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE- 554
+ A S + + ++ K + LI M+ + G I +A +K E
Sbjct: 659 VKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA----EKQFLEV 713
Query: 555 --PNEVIWSVFIAGCRRHG 571
NEV W+ I +HG
Sbjct: 714 STKNEVSWNAIINAYSKHG 732
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 250/515 (48%), Gaps = 23/515 (4%)
Query: 59 FQEAL--SVLTEGPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFL 115
FQE SV G + + LL+ C+ SL +H+ I+K G + + L
Sbjct: 27 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 86
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ Y G++ A KVFD +P + +W +I + +F+ M+ P
Sbjct: 87 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 146
Query: 176 VTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L AC + + +QIHA ++ D T V N L LYS G ++ A + F+
Sbjct: 147 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 206
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+R K+ SW +I +N + +R F M GI P + +S+ S C + SL +
Sbjct: 207 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 266
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H L +KLG++S+ V N+++ LY G + A+ +F MS + VT+N +I G
Sbjct: 267 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING--- 323
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LS G +A+ +F +++ G++PD T +S++ CS L +G+Q+HA T
Sbjct: 324 --------LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 375
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K GF S+ + AL+N+Y KC IE A F+E ++ W M+ + +
Sbjct: 376 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 435
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LI 532
++F M + + PNQ T+ L C G + LG ++ + K ++ Y+C LI
Sbjct: 436 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGE-QIHSQIIKTNFQLNAYVCSVLI 492
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAG 566
DM+ +LG ++ A+D + + F +V+ W+ IAG
Sbjct: 493 DMYAKLGKLDTAWDILIR--FAGKDVVSWTTMIAG 525
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 228/476 (47%), Gaps = 53/476 (11%)
Query: 170 GNYPTNVTLGTALTAC-SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P + TL L C + S+ G+++H+ ++K + + + L Y G L
Sbjct: 39 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 98
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-G 287
A K F+ + E+ + +W +I + F +M+SE + PNE T + + C G
Sbjct: 99 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 158
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ V Q+H+ + G + V N ++ LY + G VD A+++FDG+ + +W A
Sbjct: 159 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 218
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G L+K++ A EA+ +F + G+ P Y FSS+L+ C ++ +LE G
Sbjct: 219 MISG------LSKNECEA-----EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 267
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQ+H L LK GF SD V ALV++Y G + A +F MS R +++ ++I G +
Sbjct: 268 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 327
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGY------- 511
+A++LF+ M L G+ P+ T + ACS G ++ LG+
Sbjct: 328 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 387
Query: 512 ---FEMMQKEYKIKPVMDHYM-------CLID-MFVRLGCIEE---AFDFIKKMDFE--- 554
+ K I+ +D+++ L + M V G +++ +F ++M E
Sbjct: 388 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 447
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK----LKPKDCESYAMLLDIFVSAGR 606
PN+ + + C R G++ELG Q++K L C ++L+D++ G+
Sbjct: 448 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC---SVLIDMYAKLGK 500
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + + C ++L + IHA +G D LV +Y +CG
Sbjct: 542 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 601
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+EE+ F+ + ++W +L+SG+ Q+ E A+ VF+ M G N T G+A+ A
Sbjct: 602 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 661
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S +++ GKQ+HA + K + +T V N+L S+Y+ CGS++ A K F + KN +SW
Sbjct: 662 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 721
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGI 303
+I A ++G + L F +M+ ++PN TL + S C + + G A S+
Sbjct: 722 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 781
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
+ G + ++ + + GL+ A++ M + + W +++ ++ +
Sbjct: 782 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 841
Query: 363 LSAHN 367
+AH+
Sbjct: 842 FAAHH 846
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 23/327 (7%)
Query: 269 SEGIQPNEFTLTSISSVC-GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ GI+PN TL + C T SL G ++HS +KLG SN + + YL G +
Sbjct: 37 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 96
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
A K+FD M + TWN MI +L++ N E +F ++ S + P+
Sbjct: 97 YGAFKVFDEMPERTIFTWNKMIK-----------ELASRNLIGEVFGLFVRMVSENVTPN 145
Query: 388 LYTFSSILTIC-SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
TFS +L C VA + EQIHA L G VV L+++Y + G ++ A RVF
Sbjct: 146 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 205
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+ + SW +MI+G + + +A++LF DM + G+ P F L+AC
Sbjct: 206 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI---- 261
Query: 507 EALGYFEMMQK-EYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E+L E + K+ D Y+C L+ ++ LG + A M + + V ++
Sbjct: 262 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTL 320
Query: 564 IAGCRR--HGNMELGFYAAEQLLKLKP 588
I G + +G + + L L+P
Sbjct: 321 INGLSQCGYGEKAMELFKRMHLDGLEP 347
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/664 (35%), Positives = 373/664 (56%), Gaps = 17/664 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH + K G V+ L+ Y K G ++ A K+FD L +VVSW S+ISG V N
Sbjct: 575 IHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGF 634
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ F+ ML TL ++ AC+++ S+ LG+ +H VK + N+
Sbjct: 635 SHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNT 694
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +YS CG+LN AI+AF ++ +K V+SWT++I A G +R F +M S+G+ P+
Sbjct: 695 LLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPD 754
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+++TS+ C SL G VH+ K A L V N++M +Y KCG ++EA +F
Sbjct: 755 VYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFS 814
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
+ ++V+WN MI G++ K+ L EAL +F+++ +PD T + +L
Sbjct: 815 QIPVKDIVSWNTMIGGYS------KNSLP-----NEALKLFAEMQKES-RPDGITMACLL 862
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C L ALE G IH L+ G+ S++ V AL++MY KCG + A +F + + LI
Sbjct: 863 PACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLI 922
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
+WT MI+G H L ++A+ F+ M +AG++P+++TF L ACS++G++ E G+F M
Sbjct: 923 TWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSM 982
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
E ++P ++HY C++D+ R G + +A++ I+ M +P+ IW + GCR H ++EL
Sbjct: 983 ISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVEL 1042
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
AE + +L+P + Y +L +I+ A +WE+V ++ + L ++ SWI ++
Sbjct: 1043 AEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQG 1102
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT-----DEESASVYHSEK 690
K +F D HPQ+ IF +L+ L K K G+ + + L ++E A HSEK
Sbjct: 1103 KFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEKEVALCGHSEK 1162
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LA+AFG+LN P I V K+ +C DCH K ++ T REII+RDS R H F +G C+
Sbjct: 1163 LAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNRFHHFKDGFCS 1222
Query: 751 CRDF 754
CRDF
Sbjct: 1223 CRDF 1226
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 275/532 (51%), Gaps = 25/532 (4%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+++ ++ ++Y S+LQ C K L +++H+ I G + + LV +Y CG +
Sbjct: 443 MSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGAL 502
Query: 126 EEAQKVFDNLPRIN-VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
E +++FD++ N V W ++S Y + +I++F M + G + T L
Sbjct: 503 REGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKC 562
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
++L + K+IH V K +V NSL + Y G ++SA K F+ + +++V+SW
Sbjct: 563 FATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSW 622
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I C NG + L FF +ML + + TL + + C + SL +G +H G+K
Sbjct: 623 NSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVK 682
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
++ + N+++ +Y KCG +++A + F+ M +V+W ++IA + + + DD
Sbjct: 683 ACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVR--EGLYDD-- 738
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
A+ +F ++ S G+ PD+Y+ +S+L C+ +L++G +H K +
Sbjct: 739 -------AIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLP 791
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V AL++MY KCG +E A VF ++ + ++SW +MI G++ +SL ++AL+LF +M
Sbjct: 792 VSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKES 851
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFE-MMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
RP+ +T L AC + + G +++ Y + + + LIDM+V+ G +
Sbjct: 852 -RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVAN--ALIDMYVKCGSLVH 908
Query: 544 A---FDFIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAEQLLKLKPKD 590
A FD I + D + W+V I+GC H GN + + ++ +KP +
Sbjct: 909 ARLLFDMIPEKDL----ITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDE 956
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 183/336 (54%), Gaps = 12/336 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V ++ V+ + C N SLS +H VK ++ L+++Y KCGN+ +A +
Sbjct: 652 VDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQA 711
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F+ + + VVSWTSLI+ YV+ + AI +F +M G P ++ + L AC+ S+
Sbjct: 712 FEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSL 771
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+ +H Y+ K V N+L +Y+ CGS+ A F++I K+++SW T+IG
Sbjct: 772 DKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGY 831
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+N + L+ F++M E +P+ T+ + CG++ +L +G +H ++ GY+S L
Sbjct: 832 SKNSLPNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSEL 890
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N+++ +Y+KCG + A+ LFD + +L+TW MI+G H G E
Sbjct: 891 HVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISG-----------CGMHGLGNE 939
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
A++ F K+ +G+KPD TF+SIL CS L +G
Sbjct: 940 AIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEG 975
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/668 (33%), Positives = 375/668 (56%), Gaps = 49/668 (7%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K ++ A ++FD++P +VVSW ++S Q+ + A+ + +DM G + T
Sbjct: 234 YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 293
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
++LTAC+ L S+R GKQ+HA V++ D V ++L LY+ G A FN + +
Sbjct: 294 TSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 353
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N ++WT +I + G + + F++M +E + ++F L ++ S C + + L +G Q+
Sbjct: 354 RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 413
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKC-------------------------------GLV 327
HSL +K G + V NS++ +Y KC G V
Sbjct: 414 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 473
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS-KLNSSGMKP 386
+A++ FDGMS N++TWNAM+ + Q H + L ++ L+ ++P
Sbjct: 474 AKAREFFDGMSEKNVITWNAMLGAYIQ-----------HGAEEDGLRMYKVMLSEEYVRP 522
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D T+ ++ C+ L A + G+QI T+K G + D V A++ MY KCGRI A +VF
Sbjct: 523 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 582
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
++ + ++SW +MITG++ H + QA+++F+D+L G +P+ +++V L+ CS++G+V
Sbjct: 583 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 642
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E YF+MM++ + I P ++H+ C++D+ R G + EA D I M +P +W ++
Sbjct: 643 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 702
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
C+ HGN EL AA+ + +L D SY ++ I+ AG+ +D A ++ L R++ + +
Sbjct: 703 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 762
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVY 686
+SW+ + +KV+ FK +D HPQ I K LDEL+EK GY + TD + ++
Sbjct: 763 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR------TDSTRSEIH 816
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLA+AFGL+ P PI ++K+ +C DCH IK+I+++T RE ++RD+ R H F
Sbjct: 817 HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNG 876
Query: 747 GHCTCRDF 754
G C+C D+
Sbjct: 877 GSCSCGDY 884
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 268/564 (47%), Gaps = 88/564 (15%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
+H + ++N Y K G + +A ++F +P +V SW +L+SGY Q+ Q +++ FL
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 146
Query: 165 DMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
M +G+ +P TL A+ +C +L L Q+ A V K+ ++DD+ V +L ++ C
Sbjct: 147 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 206
Query: 224 GSLNSAIKAFNRIR-------------------------------EKNVMSWTTVIGACG 252
G+++ A + F RI+ E++V+SW ++ A
Sbjct: 207 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 266
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
++G + L M S+G++ + T TS + C + SLR G Q+H+ I+ +
Sbjct: 267 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 326
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V ++++ LY K G EA+ +F+ + N V W +I+G Q + TE+
Sbjct: 327 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ-----------YGCFTES 375
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F+++ + M D + +++++ C + L G Q+H+L LK+G + VVV +L++M
Sbjct: 376 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 435
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFA--------------------------- 465
Y KC ++ A +F M+ + ++SWTSMIT ++
Sbjct: 436 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 495
Query: 466 ----NHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
H L++++ ML VRP+ VT+V C++ G LG +++ + K
Sbjct: 496 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGA--NKLGD-QIIGRTVK 552
Query: 521 IKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ ++D + +I M+ + G I EA FDF+ D V W+ I G +HG +
Sbjct: 553 VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDI----VSWNAMITGYSQHGMGKQ 608
Query: 576 GFYAAEQLLKLKPK-DCESYAMLL 598
+ +LK K D SY +L
Sbjct: 609 AIEIFDDILKRGAKPDYISYVAVL 632
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 197/385 (51%), Gaps = 47/385 (12%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ ++G ++ +++Y S L C SL + +HA +++ H D +V + L
Sbjct: 272 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 331
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +Y K G +EA+ VF++L N V+WT LISG++Q ++ +F M
Sbjct: 332 VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 391
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C S + LG+Q+H+ +K V NSL S+Y+ C +L SA F
Sbjct: 392 FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRF 451
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ EK+++SWT++I GA ++G GLR +
Sbjct: 452 MNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMY 511
Query: 265 SKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
MLSE ++P+ T ++ C + + ++G Q+ +K+G + V N+++ +Y K
Sbjct: 512 KVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSK 571
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EA+K+FD ++ ++V+WNAMI G++Q H G +A+ IF + G
Sbjct: 572 CGRILEARKVFDFLNVKDIVSWNAMITGYSQ-----------HGMGKQAIEIFDDILKRG 620
Query: 384 MKPDLYTFSSILTICSRLVALEQGE 408
KPD ++ ++L+ CS +++G+
Sbjct: 621 AKPDYISYVAVLSGCSHSGLVQEGK 645
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 41/317 (12%)
Query: 5 PWAAAAACTLETKS---RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQE 61
P+ A+A L KS ++ +L D+N+ V++ S +Q +E V
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNN-VAWTVLISGFLQYGCFTESVELFNQMR 383
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A E + + +L+ C +R L +H+ +K+G Q V L+++Y K
Sbjct: 384 A-----ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 438
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA---------GNY 172
C N++ A+ +F + ++VSWTS+I+ Y Q A F M E G Y
Sbjct: 439 CDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAY 498
Query: 173 -----------------------PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
P VT T C+ L + +LG QI VK D
Sbjct: 499 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 558
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
TSV N++ ++YS CG + A K F+ + K+++SW +I ++G Q + F +L
Sbjct: 559 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 618
Query: 270 EGIQPNEFTLTSISSVC 286
G +P+ + ++ S C
Sbjct: 619 RGAKPDYISYVAVLSGC 635
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 148/329 (44%), Gaps = 61/329 (18%)
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMD 357
H + +G AS + ++N++++ YL CG + +A++L ++H N++T N M+ G+A++
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 358 LAK----------DDLSAHNGGTE----------ALSIFSKLNSSGMK-PDLYTFSSILT 396
L+ D+++ N +L F ++ SG P+ +T + +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE-------- 448
C L Q+ A+ K D V ALV+M+ +CG ++ ASR+FV
Sbjct: 167 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 226
Query: 449 -----------------------MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
M R ++SW M++ + +AL + DM GV
Sbjct: 227 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 286
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY-KIKPVMDHYM--CLIDMFVRLGCIE 542
R + T+ +L AC+ +L + + + + + P +D Y+ L++++ + GC +
Sbjct: 287 RLDSTTYTSSLTACAR----LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFK 342
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
EA + + N V W+V I+G ++G
Sbjct: 343 EAKGVFNSL-HDRNNVAWTVLISGFLQYG 370
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 16/257 (6%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ ++N Y K GR+ A +F M R + SW ++++G+ +L+ F M
Sbjct: 90 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 149
Query: 482 LAGVR-PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+G PN T A+ +C G AL M+QK + + + L+DMFVR G
Sbjct: 150 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQK-FDSQDDSEVAAALVDMFVRCGA 208
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++ A ++ EP + +AG + ++ +A E + +D S+ M++
Sbjct: 209 VDLASRLFVRIK-EPTMFCRNSMLAGYVKTYGVD---HALELFDSMPERDVVSWNMMVSA 264
Query: 601 FVSAGRWEDV--AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+GR + VV ++ +L T S + ++ S + LH Q +D
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 324
Query: 659 --------ELVEKAKCF 667
EL K+ CF
Sbjct: 325 PYVASALVELYAKSGCF 341
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/705 (33%), Positives = 396/705 (56%), Gaps = 24/705 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + +E G T ++ + LQ C + + IHA I+K+G D +V LV
Sbjct: 143 EALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALV 202
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y + G M EA +F NL ++V+W S+++G++QN A+ F D+ A P V
Sbjct: 203 AMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQV 262
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
++ + + A L + GK+IHAY +K + + VGN+L +Y+ C ++ +AF+ +
Sbjct: 263 SIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLM 322
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
K+++SWTT +N +Q L ++ EG+ + + SI C + L
Sbjct: 323 AHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIK 382
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H I+ G S+ ++N+I+ +Y +CG++D A ++F+ + ++V+W +MI+ +
Sbjct: 383 EIHGYTIR-GGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYV--- 438
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG +AL +FS + +G++PD T SIL+ L L++G++IH +
Sbjct: 439 ---------HNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFII 489
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF+ + + LV+MY +CG +E A ++F R LI WT+MI+ + H A++
Sbjct: 490 RKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVE 549
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF M + P+ +TF+ L ACS++G+V E + E+M+ EY+++P +HY CL+D+
Sbjct: 550 LFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLL 609
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R C+EEA+ +K M EP +W + CR H N E+G AAE+LL+L + +Y
Sbjct: 610 GRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYV 669
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ ++F + GRW+DV V+ + L++ SWI + +K+++F D LHP+ +I++
Sbjct: 670 LVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQ 729
Query: 656 VLDELVEKAKC-FGYKQQESFEL----TDEESASVY-HSEKLAIAFGLLNTPIVSPILVV 709
L ++ EK K GY Q F L +E+ +Y HSE+LAIA+GLL T +PI V
Sbjct: 730 KLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVT 789
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH+F +++ RE+IVRD+ R H F +G C+C DF
Sbjct: 790 KNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSCGDF 834
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/523 (29%), Positives = 274/523 (52%), Gaps = 20/523 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ LL+ C + L IH +K G FV+ LV +Y KC ++ A
Sbjct: 53 GVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGA 112
Query: 129 QKVFDNL-PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+K+FD + R +VVSW S+IS Y N A+ +F +ML+AG T AL AC
Sbjct: 113 RKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACED 172
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
I+LG QIHA ++K D V N+L ++Y G + A F + K++++W ++
Sbjct: 173 SSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSM 232
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ +NG + L FF + + ++P++ ++ SI G + L G ++H+ IK G+
Sbjct: 233 LTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGF 292
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
SN+ V N+++ +Y KC + + FD M+H +L++W AG+AQ +
Sbjct: 293 DSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQ-----------NK 341
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+AL + +L GM D SIL C L L + ++IH T++ G LSD V+
Sbjct: 342 CYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGG-LSDPVLQN 400
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++++Y +CG I+ A R+F + + ++SWTSMI+ + ++ L+++AL++F M G+ P
Sbjct: 401 TIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEP 460
Query: 488 NQVTFVGALAA-CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
+ VT V L+A CS + + + +++K + ++ + + L+DM+ R G +E+A+
Sbjct: 461 DYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVEDAYK 518
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
I N ++W+ I+ HG G A E +++K +
Sbjct: 519 -IFTCTKNRNLILWTAMISAYGMHG---YGEAAVELFMRMKDE 557
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 246/479 (51%), Gaps = 27/479 (5%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKCG++ +A+ +FD + ++ +W +++ GYV N + A+ ++ +M G + T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L AC +E + G +IH +KY + V NSL +LY+ C +N A K F+R+
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 238 EKN-VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+N V+SW ++I A NG + L FS+ML G+ N +T + C +++G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+H+ +K G ++ V N+++ +Y++ G + EA +F + ++VTWN+M+ G Q
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ-- 238
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
NG +EAL F L ++ +KPD + SI+ RL L G++IHA +
Sbjct: 239 ----------NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAI 288
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K GF S+++VG L++MY KC + R F M+ + LISWT+ G+A + QAL+
Sbjct: 289 KNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALE 348
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSN---AGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
L + + G+ + L AC G + E GY + PV+ + +I
Sbjct: 349 LLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGY---TIRGGLSDPVLQN--TII 403
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH---GNMELGFYAAEQLLKLKP 588
D++ G I+ A + ++ + + V W+ I+ C H N L +++ + L+P
Sbjct: 404 DVYGECGIIDYAVRIFESIECK-DVVSWTSMIS-CYVHNGLANKALEVFSSMKETGLEP 460
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/668 (33%), Positives = 375/668 (56%), Gaps = 49/668 (7%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K ++ A ++FD++P +VVSW ++S Q+ + A+ + +DM G + T
Sbjct: 214 YVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY 273
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
++LTAC+ L S+R GKQ+HA V++ D V ++L LY+ G A FN + +
Sbjct: 274 TSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHD 333
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N ++WT +I + G + + F++M +E + ++F L ++ S C + + L +G Q+
Sbjct: 334 RNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQL 393
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKC-------------------------------GLV 327
HSL +K G + V NS++ +Y KC G V
Sbjct: 394 HSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNV 453
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS-KLNSSGMKP 386
+A++ FDGMS N++TWNAM+ + Q H + L ++ L+ ++P
Sbjct: 454 AKAREFFDGMSEKNVITWNAMLGAYIQ-----------HGAEEDGLRMYKVMLSEEYVRP 502
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D T+ ++ C+ L A + G+QI T+K G + D V A++ MY KCGRI A +VF
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 562
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
++ + ++SW +MITG++ H + QA+++F+D+L G +P+ +++V L+ CS++G+V
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E YF+MM++ + I P ++H+ C++D+ R G + EA D I M +P +W ++
Sbjct: 623 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 682
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
C+ HGN EL AA+ + +L D SY ++ I+ AG+ +D A ++ L R++ + +
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVY 686
+SW+ + +KV+ FK +D HPQ I K LDEL+EK GY + TD + ++
Sbjct: 743 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYVR------TDSTRSEIH 796
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLA+AFGL+ P PI ++K+ +C DCH IK+I+++T RE ++RD+ R H F
Sbjct: 797 HSEKLAVAFGLMTLPTWMPIHIMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNG 856
Query: 747 GHCTCRDF 754
G C+C D+
Sbjct: 857 GSCSCGDY 864
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 268/564 (47%), Gaps = 88/564 (15%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
+H + ++N Y K G + +A ++F +P +V SW +L+SGY Q+ Q +++ FL
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFL 126
Query: 165 DMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
M +G+ +P TL A+ +C +L L Q+ A V K+ ++DD+ V +L ++ C
Sbjct: 127 SMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRC 186
Query: 224 GSLNSAIKAFNRIR-------------------------------EKNVMSWTTVIGACG 252
G+++ A + F RI+ E++V+SW ++ A
Sbjct: 187 GAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALS 246
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
++G + L M S+G++ + T TS + C + SLR G Q+H+ I+ +
Sbjct: 247 QSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPY 306
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V ++++ LY K G EA+ +F+ + N V W +I+G Q + TE+
Sbjct: 307 VASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ-----------YGCFTES 355
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F+++ + M D + +++++ C + L G Q+H+L LK+G + VVV +L++M
Sbjct: 356 VELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISM 415
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFA--------------------------- 465
Y KC ++ A +F M+ + ++SWTSMIT ++
Sbjct: 416 YAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAML 475
Query: 466 ----NHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
H L++++ ML VRP+ VT+V C++ G LG +++ + K
Sbjct: 476 GAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGA--NKLGD-QIIGRTVK 532
Query: 521 IKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ ++D + +I M+ + G I EA FDF+ D V W+ I G +HG +
Sbjct: 533 VGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDI----VSWNAMITGYSQHGMGKQ 588
Query: 576 GFYAAEQLLKLKPK-DCESYAMLL 598
+ +LK K D SY +L
Sbjct: 589 AIEIFDDILKRGAKPDYISYVAVL 612
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 197/385 (51%), Gaps = 47/385 (12%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ ++G ++ +++Y S L C SL + +HA +++ H D +V + L
Sbjct: 252 REALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASAL 311
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +Y K G +EA+ VF++L N V+WT LISG++Q ++ +F M
Sbjct: 312 VELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQ 371
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C S + LG+Q+H+ +K V NSL S+Y+ C +L SA F
Sbjct: 372 FALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRF 431
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ EK+++SWT++I GA ++G GLR +
Sbjct: 432 MNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMY 491
Query: 265 SKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
MLSE ++P+ T ++ C + + ++G Q+ +K+G + V N+++ +Y K
Sbjct: 492 KVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSK 551
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EA+K+FD ++ ++V+WNAMI G++Q H G +A+ IF + G
Sbjct: 552 CGRILEARKVFDFLNVKDIVSWNAMITGYSQ-----------HGMGKQAIEIFDDILKRG 600
Query: 384 MKPDLYTFSSILTICSRLVALEQGE 408
KPD ++ ++L+ CS +++G+
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGK 625
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 41/317 (12%)
Query: 5 PWAAAAACTLETKS---RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQE 61
P+ A+A L KS ++ +L D+N+ V++ S +Q +E V
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNN-VAWTVLISGFLQYGCFTESVELFNQMR 363
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A E + + +L+ C +R L +H+ +K+G Q V L+++Y K
Sbjct: 364 A-----ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAK 418
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA---------GNY 172
C N++ A+ +F + ++VSWTS+I+ Y Q A F M E G Y
Sbjct: 419 CDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAY 478
Query: 173 -----------------------PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
P VT T C+ L + +LG QI VK D
Sbjct: 479 IQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIID 538
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
TSV N++ ++YS CG + A K F+ + K+++SW +I ++G Q + F +L
Sbjct: 539 TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILK 598
Query: 270 EGIQPNEFTLTSISSVC 286
G +P+ + ++ S C
Sbjct: 599 RGAKPDYISYVAVLSGC 615
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 148/329 (44%), Gaps = 61/329 (18%)
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMD 357
H + +G AS + ++N++++ YL CG + +A++L ++H N++T N M+ G+A++
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 358 LAK----------DDLSAHNGGTE----------ALSIFSKLNSSGMK-PDLYTFSSILT 396
L+ D+++ N +L F ++ SG P+ +T + +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE-------- 448
C L Q+ A+ K D V ALV+M+ +CG ++ ASR+FV
Sbjct: 147 SCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFC 206
Query: 449 -----------------------MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
M R ++SW M++ + +AL + DM GV
Sbjct: 207 RNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGV 266
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY-KIKPVMDHYM--CLIDMFVRLGCIE 542
R + T+ +L AC+ +L + + + + + P +D Y+ L++++ + GC +
Sbjct: 267 RLDSTTYTSSLTACAR----LSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFK 322
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
EA + + N V W+V I+G ++G
Sbjct: 323 EAKGVFNSL-HDRNNVAWTVLISGFLQYG 350
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 16/257 (6%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ ++N Y K GR+ A +F M R + SW ++++G+ +L+ F M
Sbjct: 70 NVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMH 129
Query: 482 LAGVR-PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+G PN T A+ +C G AL M+QK + + + L+DMFVR G
Sbjct: 130 RSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQK-FDSQDDSEVAAALVDMFVRCGA 188
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++ A ++ EP + +AG + ++ +A E + +D S+ M++
Sbjct: 189 VDLASRLFVRIK-EPTMFCRNSMLAGYVKTYGVD---HALELFDSMPERDVVSWNMMVSA 244
Query: 601 FVSAGRWEDV--AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+GR + VV ++ +L T S + ++ S + LH Q +D
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 304
Query: 659 --------ELVEKAKCF 667
EL K+ CF
Sbjct: 305 PYVASALVELYAKSGCF 321
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/687 (35%), Positives = 386/687 (56%), Gaps = 24/687 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C +L + IH K G + FV L+++Y + G A+ +FD++
Sbjct: 220 TFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 276
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++ SW ++ISG +QN A+ V +M G VT+ + L C L I
Sbjct: 277 PFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAM 336
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH YV+K+ E D V N+L ++Y+ G+L A KAF ++ +V+SW ++I A +N
Sbjct: 337 LIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQND 396
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVR 314
+ V FF KM G QP+ TL S++S+ + VH ++ G+ ++ +
Sbjct: 397 DPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIG 456
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
N+++ +Y K GL+D A K+F+ + ++++WN +I G+AQ NG +EA+
Sbjct: 457 NAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQ------------NGLASEAI 504
Query: 374 SIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++ + + P+ T+ SIL + + AL+QG +IH +KT DV V T L+++
Sbjct: 505 EVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDV 564
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCGR+ A +F ++ + ++W ++I+ H + + L+LF +ML GV+P+ VTF
Sbjct: 565 YGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTF 624
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
V L+ACS++G V E F +MQ EY IKP + HY C++D+ R G +E A+ FIK M
Sbjct: 625 VSLLSACSHSGFVEEGKWCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMP 683
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+P+ IW + CR HGN+ELG +A+++L ++ K+ Y +L +I+ + G+WE V
Sbjct: 684 LQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDK 743
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V++L RE L +T WS I + KV F + HP+ EI++ L L K K GY
Sbjct: 744 VRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPD 803
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
SF L D +E HSE+LAIAFG+++TP SPI + K+ +C DCHN K I+
Sbjct: 804 YSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISR 863
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T REI+VRDS R H F +G C+C D+
Sbjct: 864 ITQREIVVRDSNRFHHFKDGICSCGDY 890
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 268/527 (50%), Gaps = 31/527 (5%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A+ +HA +V G Q F+ T LVN+Y G++ ++ FD +P+ +V +W S+IS YV
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194
Query: 153 NSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
N AI F +L P T L AC +L G++IH + K + +
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVF 251
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V SL +YS G A F+ + +++ SW +I +NG A Q L +M EG
Sbjct: 252 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
I+ N T+ SI VC + + +H IK G +L V N+++ +Y K G +++A+
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
K F M ++V+WN++IA + Q D ++AH F K+ +G +PDL T
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQ----NDDPVTAH-------GFFVKMQLNGFQPDLLTL 420
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEMS 450
S+ +I ++ + +H ++ G+L DVV+G A+V+MY K G ++ A +VF +
Sbjct: 421 VSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIL 480
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ +ISW ++ITG+A + L+ +A+++++ M + PNQ T+V L A ++ G + + +
Sbjct: 481 VKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGM 540
Query: 510 GYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+ + K +D ++ CLID++ + G + +A ++ E + V W+ I+
Sbjct: 541 ---RIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-SSVTWNAIISCH 596
Query: 568 RRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDI-----FVSAGRW 607
HG+ E ++L +KP D ++ LL FV G+W
Sbjct: 597 GIHGHAEKTLKLFGEMLDEGVKP-DHVTFVSLLSACSHSGFVEEGKW 642
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 213/428 (49%), Gaps = 29/428 (6%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIH 97
S LIQ NGN+ +AL VL E G K+ + VS+L C +S A +IH
Sbjct: 289 SGLIQ-NGNAA--------QALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIH 339
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE 157
+++K G D FV L+N+Y K GN+E+A+K F + +VVSW S+I+ Y QN P
Sbjct: 340 LYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPV 399
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSL 216
A F+ M G P +TL + + + + + +H ++++ +D +GN++
Sbjct: 400 TAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAV 459
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQP 274
+Y+ G L+SA K F I K+V+SW T+I +NG A + + + KM+ E I P
Sbjct: 460 VDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVY-KMMEECKEIIP 518
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N+ T SI + +L+ G ++H IK ++ V ++ +Y KCG + +A LF
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ + VTWNA+I+ H H + L +F ++ G+KPD TF S+
Sbjct: 579 YQVPQESSVTWNAIISCHG-----------IHGHAEKTLKLFGEMLDEGVKPDHVTFVSL 627
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ CS +E+G+ L + G + +V++ + G +E A +M +
Sbjct: 628 LSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPD 687
Query: 455 IS-WTSMI 461
S W +++
Sbjct: 688 ASIWGALL 695
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/686 (35%), Positives = 388/686 (56%), Gaps = 22/686 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+ + N+KSL+ + +H HI+K+GS FF L++ Y KC + EA+K+FD +P
Sbjct: 4 YTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSFFGHK-LIDGYIKCSVITEARKLFDEMP 62
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++V+W S+IS +V + + AI ++ +ML G P T A S + R G++
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 197 IHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
H V E D V + +Y+ G + A F+R+ +K+V+ +T +I + G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRG 182
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L F M+ I+PNE+TL S+ CG + L G +H L +K G S + +
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQT 242
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALS 374
S++ +Y KC +V+++ K+F+ +++ + VTW + I G Q NG E ALS
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQ------------NGREEIALS 290
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ + P+ +TFSSIL CS L LE GEQIHA+T+K G + V AL+++Y
Sbjct: 291 MFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYG 350
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG +E+A VF ++ ++S +MI +A + H+AL+LFE M G +PN VTF+
Sbjct: 351 KCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFIS 410
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC+NAG+V E F +++ + I+ DHY C+ID+ R EEA I++
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-N 469
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ + W + C+ HG +E+ +++L P+D ++ +L +I+ SAG+W++V +K
Sbjct: 470 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMK 529
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ R+ +L +T SW+ I +V++F D HP++ EI ++L EL+EK GY
Sbjct: 530 SAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTK 589
Query: 675 FELTDEE-----SASVYHSEKLAIAFGLLNT-PIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D E SA YHSEKLAIAF L T + I + K+ +C DCH++IK ++ L
Sbjct: 590 FVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLL 649
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T R+II RD+KR H F G C+C+D+
Sbjct: 650 TGRDIIARDAKRFHHFKGGICSCKDY 675
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 7/233 (3%)
Query: 62 ALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
ALS+ E + S ++ S+L C + L E IHA VK G + +V L++
Sbjct: 288 ALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIH 347
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKCGN+E+A+ VF++L ++VVS ++I Y QN A+ +F M + G+ P VT
Sbjct: 348 LYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVT 407
Query: 178 LGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ L AC++ + G QI + + + E + L A
Sbjct: 408 FISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEG 467
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP--NEFTLTSISSVCG 287
+ +V+ W T++ AC +GE +F KML + + LT+I + G
Sbjct: 468 KNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAG 520
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/669 (35%), Positives = 386/669 (57%), Gaps = 22/669 (3%)
Query: 96 IHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+HA++ ++G + LVN+YGKC ++ A VF +P + VSW S+ISG N
Sbjct: 477 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 536
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ E A+ F M G P+N ++ + L++CSSL + LG+QIH K+ + D SV N
Sbjct: 537 RFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSN 596
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE-NGEAVQGLRFFSKMLSEGIQ 273
+L +LY+ S+N K F ++ E + +SW + IGA + +Q L++F +M+ G +
Sbjct: 597 ALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWR 656
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN T +I + + L +G Q+H+L +K A + + N+++ Y KC +++ + +
Sbjct: 657 PNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEII 716
Query: 334 FDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F MS + V+WN+MI+G+ L K A+ + + G K D +TF+
Sbjct: 717 FSRMSERRDEVSWNSMISGYLHSGILHK-----------AMDLVWPMMQRGQKLDGFTFA 765
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++L+ C+ + LE+G ++HA ++ SDVVVG+ALV+MY KCG+I+ ASR F M R
Sbjct: 766 TVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVR 825
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+ SW SMI+G+A H +AL++F M G P+ VTFVG L+ACS+ G+V E +F
Sbjct: 826 NIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHF 885
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG 571
+ M + Y + P ++H+ C++D+ R G +++ DFIK M +PN +IW +V A CR +G
Sbjct: 886 KSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANG 945
Query: 572 -NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
N ELG AA+ L++L+P++ +Y +L ++ + G WEDV + R+ + + SW
Sbjct: 946 RNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSW 1005
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV----- 685
+ +KD V+ F D HP+ +I++ L EL+ K + GY + + L D E +
Sbjct: 1006 VNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLS 1065
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
YHSEKLAIAF L + PI ++K+ +C DCH K I+ + R+II+RDS R H F
Sbjct: 1066 YHSEKLAIAFVLTRKSEL-PIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFG 1124
Query: 746 NGHCTCRDF 754
G C+C D+
Sbjct: 1125 GGMCSCGDY 1133
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 234/435 (53%), Gaps = 38/435 (8%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
SL +A +H + KTG D F L+N+Y + GN+ A+K+FD +P+ N+VSW+ LIS
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGKQIHAYVVKYQT 206
GY QN P+ A +F ++ +G P + +G+AL AC S I+LG QIHA++ K
Sbjct: 215 GYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPC 274
Query: 207 EDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D + N L S+YS C GS++ A + F+ I+ +N ++W ++I G+AV + FS
Sbjct: 275 VSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFS 334
Query: 266 KMLSEGIQ----PNEFTLTSISSV------CGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
M EG++ PNE+TL S+ + CG +L ++ ++ K G+ +L V +
Sbjct: 335 VMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIE----KSGFLRDLYVGS 390
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ + + GL+D A+ +F M N VT N ++ G L+ + G EA +
Sbjct: 391 ALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVG-----------LARQHQGEEAAKV 439
Query: 376 FSKL------NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTA 428
F ++ NS + L TF+ + +G+++HA ++G + + + +G A
Sbjct: 440 FKEMKDLVEINSESLVVLLSTFTEFSNLKE---GKRKGQEVHAYLFRSGLVDARISIGNA 496
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LVNMY KC I+ A VF M ++ +SW SMI+G ++ +A+ F M G+ P+
Sbjct: 497 LVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPS 556
Query: 489 QVTFVGALAACSNAG 503
+ + L++CS+ G
Sbjct: 557 NFSVISTLSSCSSLG 571
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 148/339 (43%), Gaps = 45/339 (13%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ G + +++++L + L IHA I+K D + L+ YGKC
Sbjct: 648 LEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKC 707
Query: 123 GNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
ME+ + +F + R + VSW S+ISGY+ + A+ + M++ G T T
Sbjct: 708 EQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATV 767
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+S+ ++ G ++HA V+ E D VG++L +Y+ CG ++ A + F + +N+
Sbjct: 768 LSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 827
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW ++I +G + L+ F++M G P+ T + S C +
Sbjct: 828 YSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHV------------ 875
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
GLVDE K F M V ++ I + M+DL
Sbjct: 876 -----------------------GLVDEGYKHFKSMGEVYGLS--PRIEHFSCMVDLL-- 908
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
G + + F K + M P++ + ++L C R
Sbjct: 909 ---GRAGDVKKIEDFIK--TMPMDPNILIWRTVLGACCR 942
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 158/323 (48%), Gaps = 28/323 (8%)
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
SL +H K G+ ++ N+++ +Y++ G + A+KLFD M NLV+W+ +I+
Sbjct: 155 SLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLIS 214
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL--VALEQGE 408
G+ Q + EA S+F + SSG+ P+ + S L C + ++ G
Sbjct: 215 GYTQ-----------NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGM 263
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKC-GRIERASRVFVEMSTRTLISWTSMITGFANH 467
QIHA K +SD+++ L++MY C G I+ A RVF E+ R ++W S+I+ +
Sbjct: 264 QIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRR 323
Query: 468 SLSHQALQLFEDMLLAGV----RPNQVTFVGAL-AACS--NAGMVYEALGYFEMMQKEYK 520
+ A +LF M + GV RPN+ T + AACS + G+V +M+ + K
Sbjct: 324 GDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLE----QMLTRIEK 379
Query: 521 IKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
+ D Y+ L++ F R G ++ A K+M ++ N V + + G R E
Sbjct: 380 SGFLRDLYVGSALVNGFARYGLMDCAKMIFKQM-YDRNAVTMNGLMVGLARQHQGEEAAK 438
Query: 579 AAEQLLKLKPKDCESYAMLLDIF 601
+++ L + ES +LL F
Sbjct: 439 VFKEMKDLVEINSESLVVLLSTF 461
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 6/214 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ G K+ ++ ++L C + +L +HA V+ D V + LV++Y KCG
Sbjct: 752 MMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGK 811
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A + F+ +P N+ SW S+ISGY ++ + A+ +F M + G P +VT L+A
Sbjct: 812 IDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSA 871
Query: 185 CSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNV 241
CS + + G K + Y + + L G + I+ F + + N+
Sbjct: 872 CSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKK-IEDFIKTMPMDPNI 930
Query: 242 MSWTTVIGACGE-NGEAVQGLRFFSKMLSEGIQP 274
+ W TV+GAC NG + + +KML E ++P
Sbjct: 931 LIWRTVLGACCRANGRNTELGQRAAKMLIE-LEP 963
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/697 (33%), Positives = 383/697 (54%), Gaps = 18/697 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG K +++++L V+ +L + IH+ + ++ D FV T LVN Y KCG+
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A+KVFD +P +V +W S+IS Y + + A +F M G VT + L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C + E+++ GK + + + E D VG +L ++Y+ C S +A + F R+++KN+++W
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I A ++G + LR+F M EGI PN T S+ + T L +++H L +
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240
Query: 305 LGYASNLRVRNSIMYLYLKC--GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
G + N+++ +Y +C G +D A+ + M + WN +I G+
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGY---------- 290
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
+ H EAL + +L + D TF S+L C+ +L +G+ IH+ ++ G SD
Sbjct: 291 -TLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD 349
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V+V AL NMY KCG +E A R+F M R+ +SW M+ +A H S + L+L M
Sbjct: 350 VIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQ 409
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
GV+ N +TFV L++CS+AG++ E YF + + I+ +HY CL+D+ R G ++
Sbjct: 410 EGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQ 469
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA +I KM EP V W+ + CR H +++ G AA +LL+L P + + +L +I+
Sbjct: 470 EAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYS 529
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
G W++ A ++ ++ + S I++K+KV+ F+ D HP++AEI+ ++EL
Sbjct: 530 ERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCF 589
Query: 663 KAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
+ GY L D +ES YHSEKLAIAFGL++TP S + + K+ +C D
Sbjct: 590 AMREAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCED 649
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH K I+ +T REI+VRD+ R H F +G C+C+D+
Sbjct: 650 CHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDY 686
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/686 (33%), Positives = 376/686 (54%), Gaps = 22/686 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ C +HA V G D + L+++YGKC ++ A VFD + N
Sbjct: 10 LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERN 69
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWT+L+ GY+Q + ++ + +M +G P T T+L AC +L + G QIH
Sbjct: 70 VVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHG 129
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
VK E + VGN+ +YS CG + A + FN++ +N++SW +I G +
Sbjct: 130 MCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRK 189
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR--VRNSI 317
L F +M +G P+EFT TS CG + ++R G Q+H+ I G+ ++R + ++I
Sbjct: 190 SLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAI 249
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ LY KCG + EAQK+FD + NL++W+A+I G AQ +L EA+ +F
Sbjct: 250 VDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNL-----------LEAMDLFR 298
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+L S D + S ++ + + L +EQG+Q+H LK D+ V ++++MY KCG
Sbjct: 299 QLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCG 358
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
E A R+F EM R ++SWT MITG+ H L +A+ LF M L G+ ++V ++ L+
Sbjct: 359 LTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLS 418
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
ACS++G++ E+ YF + +++KP ++HY C++D+ R G ++EA + I+ M +PNE
Sbjct: 419 ACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNE 478
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
IW ++ CR HGN+E+G E L ++ + +Y M+ +I+ AG W++ V+ L
Sbjct: 479 GIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLV 538
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK-CFGYKQQESFE 676
+ + L + SW+ I +++ F D HP + +I ++L E+ + K GY F
Sbjct: 539 KAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFA 598
Query: 677 LTDEESASV-----YHSEKLAIAFGLLNTPIVSP---ILVVKSTTMCRDCHNFIKIITSL 728
L D E S HSEKLAI L+ + I V K+ +C DCH FIK ++ +
Sbjct: 599 LHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKI 658
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +VRD+ R H+F +G C+C D+
Sbjct: 659 LKKVFVVRDANRFHRFEDGLCSCGDY 684
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 199/403 (49%), Gaps = 29/403 (7%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L L CS G Q+HA V D + N L +Y C ++ A F+R+
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
E+NV+SWT ++ + G A L +M G++PNEFT ++ CG + + G Q
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H + +K G+ V N+ + +Y KCG + A+++F+ M NLV+WNAMIAGH
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGH----- 181
Query: 358 LAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G G ++L +F ++ G PD +TF+S L C L A+ G QIHA +
Sbjct: 182 -------THEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLIT 234
Query: 417 TGFLSDV--VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
GF + ++ +A+V++Y KCG + A +VF + + LISW+++I GFA +A+
Sbjct: 235 RGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAM 294
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY----KIKPVMDHYMC 530
LF + V+ V G V+ L E ++ + K+ +D +
Sbjct: 295 DLFRQL------RESVSNVDGFVLSIMMG-VFADLALVEQGKQMHCYILKVPSGLDISVA 347
Query: 531 --LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+IDM+++ G EEA +M N V W+V I G +HG
Sbjct: 348 NSIIDMYLKCGLTEEAERLFSEMQVR-NVVSWTVMITGYGKHG 389
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 177/344 (51%), Gaps = 17/344 (4%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
+L++L E G K ++ + L+ C + N IH VK+G V ++
Sbjct: 89 SLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATID 148
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG + A++VF+ +P N+VSW ++I+G+ ++ +F M G P T
Sbjct: 149 MYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFT 208
Query: 178 LGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ L AC +L +IR G QIHA ++ + + +++ LY+ CG L A K F+R
Sbjct: 209 FTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDR 268
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I +KN++SW+ +I + G ++ + F ++ + F L+ + V + + G
Sbjct: 269 IEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQG 328
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H +K+ ++ V NSI+ +YLKCGL +EA++LF M N+V+W MI G+ +
Sbjct: 329 KQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGK- 387
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
H G +A+ +F+++ G++ D + ++L+ CS
Sbjct: 388 ----------HGLGEKAIHLFNRMQLDGIELDEVAYLALLSACS 421
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/694 (32%), Positives = 373/694 (53%), Gaps = 17/694 (2%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG +Y++LL L + IH V+ G + D V T LV + +CG+++
Sbjct: 222 SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVD 281
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++ F + +VV + +LI+ Q+ A + M G T + L ACS
Sbjct: 282 SAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACS 341
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ +++ GK IH+++ + D +GN+L S+Y+ CG L A + F + +++++SW
Sbjct: 342 TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNA 401
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I + + +R + +M SEG++P T + S C + G +H ++ G
Sbjct: 402 IIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSG 461
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
SN + N++M +Y +CG + EAQ +F+G ++++WN+MIAGHAQ H
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQ-----------H 510
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
A +F ++ + ++PD TF+S+L+ C ALE G+QIH ++G DV +G
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+NMY +CG ++ A VF + R ++SWT+MI G A+ +A++LF M G R
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 487 -PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
P+ TF L+AC++AG+V E F M+ EY + P ++HY CL+ + R +EA
Sbjct: 631 PPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAE 690
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I +M F P+ +W + CR HGN+ L +AA LKL ++ Y +L +++ +AG
Sbjct: 691 TLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAG 750
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
RW+DVA ++ + + + SWI + + ++ F D HP++AEI+ L L + +
Sbjct: 751 RWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEME 810
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY L D +E++ HSE+LAIA+GL+ TP +PI + K+ +C DCH
Sbjct: 811 EAGYFPDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHT 870
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ L REII RDS R H F NG C+C D+
Sbjct: 871 ASKFISKLVGREIIARDSNRFHSFKNGKCSCEDY 904
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/504 (33%), Positives = 279/504 (55%), Gaps = 15/504 (2%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++YV+LLQ C ++ L A+ IHA +V+ G D F+ L+N+Y KC ++ +A +VF
Sbjct: 28 ATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKE 87
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+PR +V+SW SLIS Y Q + A +F +M AG P +T + LTAC S + G
Sbjct: 88 MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K+IH+ ++K + D V NSL S+Y CG L A + F I ++V+S+ T++G +
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ L F +M SEGI P++ T ++ T L G ++H L ++ G S++RV
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ + ++CG VD A++ F G++ ++V +NA+IA AQ H EA
Sbjct: 268 TALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQ-----------HGHNVEAFE 316
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ ++ S G+ + T+ SIL CS ALE G+ IH+ + G SDV +G AL++MY
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
+CG + +A +F M R LISW ++I G+A +A++L++ M GV+P +VTF+
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+AC+N+ + E + + IK L++M+ R G + EA + + +
Sbjct: 437 LLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGT--Q 493
Query: 555 PNEVI-WSVFIAGCRRHGNMELGF 577
+VI W+ IAG +HG+ E +
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAY 517
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 212/393 (53%), Gaps = 13/393 (3%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F++ + ++G + ++Y+S+L C K+L ++IH+HI + G D + L+++
Sbjct: 315 FEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISM 374
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y +CG++ +A+++F +P+ +++SW ++I+GY + A+ ++ M G P VT
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTF 434
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L+AC++ + GK IH +++ + + + N+L ++Y CGSL A F +
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V+SW ++I ++G + F +M +E ++P+ T S+ S C +L +G Q+
Sbjct: 495 RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H + G ++ + N+++ +Y++CG + +A+ +F + H ++++W AMI G A D
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCA---DQ 611
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMK-PDLYTFSSILTICSRLVALEQGEQI-HALTLK 416
+D +A+ +F ++ + G + PD TF+SIL+ C+ + +G QI ++ +
Sbjct: 612 GED--------MKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESE 663
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
G L + LV + + R + A + +M
Sbjct: 664 YGVLPTIEHYGCLVGLLGRARRFQEAETLINQM 696
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 29/251 (11%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D T+ ++L C+R L + ++IHA ++ G D+ + L+NMY KC + A +VF
Sbjct: 26 DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC-SNAGMV 505
EM R +ISW S+I+ +A +A QLFE+M AG PN++T++ L AC S A +
Sbjct: 86 KEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELE 145
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+ ++++ Y+ P + + L+ M+ + G + A + P +V+
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQVFAGIS--PRDVVSY---- 197
Query: 566 GCRRHGNMELGFYAAEQLLK-------------LKPKDCESYAMLLDIFVSAGRWEDVAV 612
N LG YA + +K + P D +Y LLD F + ++
Sbjct: 198 ------NTMLGLYAQKAYVKECLGLFGQMSSEGISP-DKVTYINLLDAFTTPSMLDEGKR 250
Query: 613 VKNLTREEKLS 623
+ LT EE L+
Sbjct: 251 IHKLTVEEGLN 261
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 243/748 (32%), Positives = 397/748 (53%), Gaps = 78/748 (10%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG------------- 120
++ Y + +++C+ + + ++IH +I++T H + F+ +V+ Y
Sbjct: 3 SNYYSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFD 62
Query: 121 ------------------KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
K G++ E ++ F+ LP + V+W LI GY + A+
Sbjct: 63 GIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 122
Query: 163 FLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
+ M+ + + T VTL T L SS + LGKQIH V+K E VG+ L +YS
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYS 182
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIG---ACG-------------------------- 252
G ++ A K F + ++N + + T++G ACG
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGL 242
Query: 253 -ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG + + F +M EG++ +++ S+ CG + ++ G Q+H+ I+ ++
Sbjct: 243 AQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHI 302
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V ++++ +Y KC + A+ +FD M N+V+W AM+ G+ Q E
Sbjct: 303 YVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-----------GRAGE 351
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ IF + SG+ PD YT ++ C+ + +LE+G Q H + G + + V +LV
Sbjct: 352 AVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVT 411
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG I+ ++R+F EM+ R +SWT+M++ +A + +A+QLF+ M+ G++P+ VT
Sbjct: 412 LYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVT 471
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
G ++ACS AG+V + YFE+M EY I P HY C+ID+F R G IEEA FI M
Sbjct: 472 LTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGM 531
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
F P+ + W+ ++ CR GN+E+G +AAE L++L P Y +L I+ S G+W+ VA
Sbjct: 532 PFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDCVA 591
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
++ +E+ + + SWI+ K K++SF +D P S +I+ L+EL +K GYK
Sbjct: 592 QLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKP 651
Query: 672 QESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
SF D EE+ + HSE+LAIAFGL+ P PI V K+ +C DCHN K I+
Sbjct: 652 DTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLPIRVGKNLRVCVDCHNATKHIS 711
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
S+T REI+VRD+ R H+F +G C+C DF
Sbjct: 712 SVTGREILVRDAVRFHRFKDGTCSCGDF 739
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 155/285 (54%), Gaps = 2/285 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG K+ + S+L C ++++ IHA I++T +V + L+++Y KC +
Sbjct: 261 EGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHY 320
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD + + NVVSWT+++ GY Q + A+ +FLDM +G P + TLG A++AC++
Sbjct: 321 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACAN 380
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ S+ G Q H + +V NSL +LY CG ++ + + FN + ++ +SWT +
Sbjct: 381 ISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAM 440
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-KLG 306
+ A + G AV+ ++ F KM+ G++P+ TLT + S C + G + L I + G
Sbjct: 441 VSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYG 500
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ + ++ L+ + G ++EA +GM + + W +++
Sbjct: 501 IVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLS 545
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 353/597 (59%), Gaps = 18/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD++ G+ P L C+ L ++ G+ IHA++ EDD + N + ++Y+
Sbjct: 93 LDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAK 152
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGSL A F+++ K+++SWT +I ++G+A + L F KML G QPNEFTL+S+
Sbjct: 153 CGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL 212
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
GT S G Q+H+ +K GY N+ V +S++ +Y + + EA+ +F+ ++ N+
Sbjct: 213 LKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNV 272
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+IAGHA+ + G + +F ++ G +P +T+SS+ T C+
Sbjct: 273 VSWNALIAGHARKGE-----------GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSG 321
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+LEQG+ +HA +K+G +G L++MY K G I+ A +VF + + ++SW S+I+
Sbjct: 322 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIIS 381
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G+A H L +ALQLFE ML A V+PN++TF+ L ACS++G++ E YFE+M+K +KI+
Sbjct: 382 GYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIE 440
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
+ H++ ++D+ R G + EA FI++M +P +W + CR H NM+LG YAAEQ
Sbjct: 441 AQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQ 500
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D + +L +I+ SAGR D A V+ + +E + + SW+ I+++V+ F
Sbjct: 501 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 560
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGL 697
ND HP EI ++ +++ K K GY S L D E YHSEKLA+AF +
Sbjct: 561 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 620
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L TP I + K+ +C DCH+ K + + REIIVRD+ R H F++G C+CRD+
Sbjct: 621 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDY 677
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 12/386 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y +L +C + L IHAHI + D ++ F++N+Y KCG++EEAQ +FD +P
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++VSWT LISGY Q+ Q A+ +F ML G P TL + L A + S G+Q
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+HA+ +KY + + VG+SL +Y+ + A FN + KNV+SW +I GE
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGE 287
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+R F +ML +G +P FT +S+ + C + SL G VH+ IK G + N+
Sbjct: 288 GEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 347
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G + +A+K+F + ++V+WN++I+G+AQ H G EAL +F
Sbjct: 348 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ-----------HGLGAEALQLF 396
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ + ++P+ TF S+LT CS L++G+ L K + V +V++ +
Sbjct: 397 EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRA 456
Query: 437 GRIERASRVFVEMSTR-TLISWTSMI 461
GR+ A++ EM + T W +++
Sbjct: 457 GRLNEANKFIEEMPIKPTAAVWGALL 482
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L +L +G + +Y S+ C + SL + +HAH++K+G ++ L+++Y K
Sbjct: 296 LQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKS 355
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++++A+KVF L + ++VSW S+ISGY Q+ A+ +F ML+A P +T + L
Sbjct: 356 GSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVL 415
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
TACS + G+ + K++ E + ++ L G LN A K + K
Sbjct: 416 TACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTA 475
Query: 243 S-WTTVIGAC 251
+ W ++G+C
Sbjct: 476 AVWGALLGSC 485
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L + +N ++P+ +S +L C+ L L+QG IHA + F D+V+ ++NM
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG +E A +F +M T+ ++SWT +I+G++ + +AL LF ML G +PN+ T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
L A S G +Y + L+DM+ R + EA +
Sbjct: 210 SSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 553 FEPNEVIWSVFIAGCRRHGNME 574
+ N V W+ IAG R G E
Sbjct: 269 AK-NVVSWNALIAGHARKGEGE 289
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/686 (33%), Positives = 390/686 (56%), Gaps = 19/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y+ +L + L + IH +V+ G Q V +N+Y K G++ A+++F +
Sbjct: 299 TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQM 358
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE-SIRLG 194
++++SW ++ISG ++ E ++ +F+D+L +G P T+ + L ACSSLE S +G
Sbjct: 359 KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVG 418
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+H +K D+ V +L +YS G + A F+ ++ SW ++ +
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVS 478
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ LR FS M G + ++ T + + G ++ L+ G Q+H++ IK+ + +L V
Sbjct: 479 DNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVI 538
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ I+ +YLKCG + A+K+F+ + + V W +I+G NG E AL
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISG------------CVENGEEEQAL 586
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ ++ +G++PD YTF++++ CS L ALEQG+QIHA +K D V T+LV+MY
Sbjct: 587 FTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMY 646
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE A +F M+TR++ W +MI G A H + +AL F +M GV P++VTF+
Sbjct: 647 AKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFI 706
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+ +A F+ MQK Y ++P ++HY CL+D R G I+EA + M F
Sbjct: 707 GVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPF 766
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
E + ++ + CR G+ E G AE+L + P D +Y +L +I+ +A +WE+
Sbjct: 767 EASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSA 826
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+N+ + + + +SWI +K+KV+ F D H ++ I+ ++ ++++ K GY
Sbjct: 827 RNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYVPDT 886
Query: 674 SFELT-----DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D+ESA YHSEKLAIA+GL+ TP + + V+K+ +C DCHN IK I+++
Sbjct: 887 EFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISNV 946
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI++RD+ R H F +G C+C D+
Sbjct: 947 FQREIVLRDANRFHHFRSGICSCGDY 972
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 246/457 (53%), Gaps = 22/457 (4%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A K+F +V W +S Y+Q + A+ F DM+++ ++T L+ +S
Sbjct: 250 ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVAS 309
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + LGKQIH VV++ + SV NS ++Y GS+N A + F +++E +++SW TV
Sbjct: 310 LNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTV 369
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM-LSLRVGAQVHSLGIKLG 306
I C +G LR F +L G+ P++FT+TS+ C ++ S VG QVH+ +K G
Sbjct: 370 ISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAG 429
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ V +++ +Y K G ++EA+ LF +L +WNAM+ G +
Sbjct: 430 IVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHG-----------FTVS 478
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
+ EAL +FS ++ G K D TF++ LV L+QG+QIHA+ +K F D+ V
Sbjct: 479 DNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVI 538
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+ +++MY KCG ++ A +VF ++ + ++WT++I+G + QAL + M LAGV+
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQ 598
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYM--CLIDMFVRLGCIEE 543
P++ TF + ACS + AL + + K+ D ++ L+DM+ + G IE+
Sbjct: 599 PDEYTFATLVKACS----LLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIED 654
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFY 578
A+ ++M+ + +W+ I G +HGN E L F+
Sbjct: 655 AYGLFRRMNTR-SVALWNAMIVGLAQHGNAEEALNFF 690
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 237/519 (45%), Gaps = 69/519 (13%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L + C+ S S +E + + VK G D FV LVN+Y K + EA+ +FD +P +
Sbjct: 128 LFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRD 187
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI-RLGKQIH 198
VV W ++ YV+ + + +F +G P V++ T L R +Q+
Sbjct: 188 VVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVR 247
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AY K DD S +V W + + + GE
Sbjct: 248 AYATKLFVCDDDS----------------------------DVTVWNKTLSSYLQAGEGW 279
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F M+ + + T I SV ++ L +G Q+H ++ G+ + V NS +
Sbjct: 280 EAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAI 339
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFS 377
+Y+K G V+ A+++F M V+L++WN +I+G A +G E +L +F
Sbjct: 340 NMYVKAGSVNYARRMFGQMKEVDLISWNTVISG------------CARSGLEECSLRLFI 387
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQ----GEQIHALTLKTGFLSDVVVGTALVNMY 433
L SG+ PD +T +S+L CS +LE+ G Q+H LK G + D V TAL+++Y
Sbjct: 388 DLLRSGLLPDQFTITSVLRACS---SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVY 444
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
K G++E A +F L SW +M+ GF +AL+LF M G + +Q+TF
Sbjct: 445 SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA 504
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMD----HYMC-----LIDMFVRLGCIEEA 544
A +A G +Q+ +I V+ HY ++DM+++ G ++ A
Sbjct: 505 NAA----------KAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSA 554
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
++ P++V W+ I+GC +G E + Q+
Sbjct: 555 RKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTYHQM 592
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 223/486 (45%), Gaps = 52/486 (10%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P + S+L+ + L + HA IV +G + D +V L+ +Y KCG++ A+
Sbjct: 9 PSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSAR 68
Query: 130 KVFDNLPRIN--VVSWTSLISGYVQNSQ------PELAIHVFLDMLEAGNYPTNVTLGTA 181
K+FD P+ + +V++ ++++ Y + A H+F + ++ T TL
Sbjct: 69 KLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPL 128
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
C S + + Y VK + D V +L ++Y+ + A F+R+ ++V
Sbjct: 129 FKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDV 188
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W ++ A E G + L FS G++P+ C ++ ++ +G +
Sbjct: 189 VLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPD----------CVSVRTILMG-----V 233
Query: 302 GIKLGYASNL-RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
G K + L +VR A KLF ++ WN ++ + Q +
Sbjct: 234 GKKTVFERELEQVRAY-------------ATKLFVCDDDSDVTVWNKTLSSYLQAGE--- 277
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
G EA+ F + S + D T+ IL++ + L LE G+QIH ++ G+
Sbjct: 278 --------GWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWD 329
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
V V + +NMY K G + A R+F +M LISW ++I+G A L +L+LF D+
Sbjct: 330 QFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDL 389
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRL 538
L +G+ P+Q T L ACS+ Y +G ++ K V+D ++ LID++ +
Sbjct: 390 LRSGLLPDQFTITSVLRACSSLEESY-CVGR-QVHTCALKAGIVLDSFVSTALIDVYSKG 447
Query: 539 GCIEEA 544
G +EEA
Sbjct: 448 GKMEEA 453
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 169/394 (42%), Gaps = 62/394 (15%)
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGA 250
LGK+ HA +V D V N+L ++Y+ CGSL SA K F+ +++++++ ++ A
Sbjct: 31 LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 251 CGENGE------AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
GE + F + + TL+ + +C S + +K
Sbjct: 91 YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVK 150
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+G ++ V +++ +Y K + EA+ LFD M ++V WN M+ + +M
Sbjct: 151 IGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEM--------- 201
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDV 423
G E L +FS + SG++PD + +IL + E+ EQ+ A
Sbjct: 202 --GAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAY---------- 249
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
A+++FV + W ++ + +A+ F DM+ +
Sbjct: 250 ------------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKS 291
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK--IKPVMDHYMCL----IDMFVR 537
V + +T++ L+ V +L + E+ ++ + ++ D ++ + I+M+V+
Sbjct: 292 RVPCDSLTYIVILS-------VVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVK 344
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G + A +M E + + W+ I+GC R G
Sbjct: 345 AGSVNYARRMFGQMK-EVDLISWNTVISGCARSG 377
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/716 (32%), Positives = 385/716 (53%), Gaps = 38/716 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y S+LQ+C +L +HA +V G F+ + L+ VY + G +E+A+++FD +
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 72
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
NV SWT+++ Y E I +F M+ G P + ACS L++ R+GK
Sbjct: 73 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 132
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
++ Y++ E ++ V S+ ++ CG ++ A + F I K+V W ++ GE
Sbjct: 133 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 192
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRN 315
+ L F KM+ EG++PN T+ S S C + LR G ++H IK+ S+L V N
Sbjct: 193 FKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGN 252
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA--GHAQMMD---------------- 357
S++ Y KC V+ A++ F + +LV+WNAM+A G Q D
Sbjct: 253 SLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACS 312
Query: 358 ----LAKDDLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
L+ D+ N AL + ++N S ++ + T S L CS+L A
Sbjct: 313 VFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAA 372
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L QG++IH ++ G + + +L++MY +CG I+++ R+F M R L+SW MI+
Sbjct: 373 LRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISV 432
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+ H A+ LF+ G++PN +TF L+ACS++G++ E YF+MM+ EY + P
Sbjct: 433 YGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDP 492
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
++ Y C++D+ R G E +FI+KM FEPN +W + CR H N +L YAA L
Sbjct: 493 AVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 552
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
+L+P+ +Y ++ +I+ +AGRWED A ++ L +E +++ SWI +K K++SF
Sbjct: 553 FELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 612
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
D HP +I ++ L K GY +F L D +E + HSEK+A+AFGL+
Sbjct: 613 DTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLI 672
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T +P+ ++K+ +C DCH+ K I+ + R+II+RD+ R H FV+G C+C D+
Sbjct: 673 STTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDY 728
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 206/421 (48%), Gaps = 58/421 (13%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + + + + C K+ + ++ +++ G + V +++++ KCG
Sbjct: 102 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 161
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
M+ A++ F+ + +V W ++SGY + + A++VF M+ G P ++T+ +A++A
Sbjct: 162 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSA 221
Query: 185 CSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIRE----- 238
C++L +R G++IH Y +K + D D VGNSL Y+ C S+ A + F I++
Sbjct: 222 CTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVS 281
Query: 239 --------------------------------------KNVMSWTTVIGACGENGEAVQG 260
++V+ W ++I AC ++G +V
Sbjct: 282 WNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNA 341
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L +M ++ N T+ S C + +LR G ++H I+ G + + NS++ +
Sbjct: 342 LDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 401
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y +CG + +++++FD M +LV+WN MI+ + H G +A+++F +
Sbjct: 402 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM-----------HGFGMDAVNLFQQFR 450
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG--TALVNMYKKCGR 438
+ G+KP+ TF+++L+ CS +E+G + + +KT + D V +V++ + G+
Sbjct: 451 TMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRAGQ 509
Query: 439 I 439
Sbjct: 510 F 510
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL +L E +V T + VS L C +L + IH I++ G F++ L++
Sbjct: 341 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 400
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YG+CG++++++++FD +P+ ++VSW +IS Y + A+++F G P ++T
Sbjct: 401 MYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHIT 460
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNR 235
L+ACS I G + + ++K + D +V C L S G N ++ +
Sbjct: 461 FTNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEK 519
Query: 236 IR-EKNVMSWTTVIGAC 251
+ E N W +++GAC
Sbjct: 520 MPFEPNAAVWGSLLGAC 536
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 266/786 (33%), Positives = 402/786 (51%), Gaps = 105/786 (13%)
Query: 74 TSSYVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ Y + LQ+C N S S A +HAH++ +G +++ L++VY K ++ A +
Sbjct: 13 ANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHL 72
Query: 132 FDNLPRINVVSWTSLI---------------------------------SGYVQNSQPEL 158
FD + + ++V+ T+LI +GY N+
Sbjct: 73 FDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFG 132
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
AI +F D+L G P N T + L A + + E + +QIH VVK + TSV N+L
Sbjct: 133 AIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALL 192
Query: 218 SLYSTCGS---------LNSAIKAFNRIREKNVMSWTTVIGACGENGEA----------- 257
S++ C S + +A K F+ + E++ +SWTT+I NGE
Sbjct: 193 SVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMT 252
Query: 258 --------------------VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++ L F KM GIQ +EFT TS+ S C G Q
Sbjct: 253 EKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQ 312
Query: 298 VHSLGIKL----GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH- 352
VH+ ++ +L V N++ LY KCG VDEA+++F+ M +LV+WNA+++G+
Sbjct: 313 VHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYV 372
Query: 353 -AQMMDLAKDDLS-----------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSS 393
A +D AK A NG G E+L +F+++ S G +P Y F+
Sbjct: 373 NAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAG 432
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+ C+ L AL G Q+HA ++ GF S + G AL+ MY KCG +E A +F+ M
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLD 492
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+SW +MI H QAL+LFE ML + P+++TF+ L+ CS+AG+V E YF+
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFK 552
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M Y I P DHY +ID+ R G EA D I+ M EP IW +AGCR HGNM
Sbjct: 553 SMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNM 612
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+LG AAE+L +L P+ +Y +L +++ + GRW+DVA V+ L R++ + + SWI +
Sbjct: 613 DLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEV 672
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHS 688
++KV+ F +D +HP+ ++ L+EL K + GY F L D ES HS
Sbjct: 673 ENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHS 732
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLA+ FGLL P+ + + V K+ +C DCHN K ++ + REI+VRD KR H F NG
Sbjct: 733 EKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGE 792
Query: 749 CTCRDF 754
C+C ++
Sbjct: 793 CSCGNY 798
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG + ++ + C +L + +HA +V+ G L+ +Y KCG +E
Sbjct: 420 SEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVE 479
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A +F +P ++ VSW ++I+ Q+ A+ +F ML+ P +T T L+ CS
Sbjct: 480 AAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS 539
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
HA +V E+ S+ LY C
Sbjct: 540 -----------HAGLV----EEGHRYFKSMSGLYGIC 561
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/683 (33%), Positives = 375/683 (54%), Gaps = 34/683 (4%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V SY L + C +SL++ +IH + +T + + L+ +Y CG+ + QKV
Sbjct: 85 VTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKV 144
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + N+VSW +IS Y +N + E AI +F DM +G P + + L +C +
Sbjct: 145 FDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFL 204
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGKQ+H++V++ Q + +V ++C++Y CG L A F+ + +N ++WT ++
Sbjct: 205 ELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGY 264
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ + L F++M EG++ +EF + + VC + +G Q+HS +KLG S +
Sbjct: 265 TQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEV 324
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V ++ Y+KCG ++ A + F +S N V+W+A+I+G +Q L +
Sbjct: 325 SVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRL-----------ED 373
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+ IF+ L S G+ + + ++S+ C+ L G Q H +K G +S + +A+V
Sbjct: 374 CIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVT 433
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCGR++ A R F + ++WT++I+G+A H + +AL F M GVRPN VT
Sbjct: 434 MYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVT 493
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G+V EA Y M ++Y +KP +DHY C+ID + R G + EA + I +M
Sbjct: 494 FIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRM 553
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
FEP+ + W + GC H +++LG AAE L +L P D Y +L +++ + G+WE+
Sbjct: 554 PFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAG 613
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
V+ L E +L + SWI +K +V+ +P ++L+E +
Sbjct: 614 HVRKLMAERELKKEVSCSWISVKGQVH--RP-----------VRLLNE----------ED 650
Query: 672 QESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
S L + + HSEKLAIAFGL++T +PILV K+ CRDCH F K ++ +T R
Sbjct: 651 DVSCSLPARKEQLLDHSEKLAIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGR 710
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
+I+VRDS R H F +G C+C D+
Sbjct: 711 QIVVRDSTRFHHFKSGKCSCNDY 733
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/714 (33%), Positives = 406/714 (56%), Gaps = 32/714 (4%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+SE +R +L +L+ G + ++ S+L+ C N +++ IH +K G D
Sbjct: 133 SSEVIRCF----SLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDV 185
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V L+++Y + G + A+ +FD +P ++ SW ++ISGY Q+ + A+ D L A
Sbjct: 186 YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL-TLSDGLRA 244
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
+ T V+L L+AC+ G IH+Y +K+ E + V N L LY+ GSL
Sbjct: 245 MDSVTVVSL---LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDC 301
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
K F+R+ ++++SW ++I A N + ++ + F +M IQP+ TL S++S+ +
Sbjct: 302 QKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQL 361
Query: 290 LSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+R V ++ G + ++ + N+++ +Y K GLVD A+ +F+ + + ++++WN +
Sbjct: 362 GEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTI 421
Query: 349 IAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSG--MKPDLYTFSSILTICSRLVALE 405
I+G+AQ NG +EA+ +++ + G + + T+ S+L CS+ AL
Sbjct: 422 ISGYAQ------------NGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALR 469
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG ++H LK G DV VGT+L +MY KCGR++ A +F ++ + W ++I
Sbjct: 470 QGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHG 529
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H +A+ LF++ML GV+P+ +TFV L+ACS++G+V E FEMMQ +Y I P +
Sbjct: 530 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSL 589
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY C++D++ R G +E A +FIK M +P+ IW ++ CR HGN++LG A+E L +
Sbjct: 590 KHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 649
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
++P+ + +L +++ SAG+WE V ++++T + L +T WS + + +KV F +
Sbjct: 650 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQ 709
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNT 700
HP E+++ L L EK K GY F L D +E + HSE+LA+AF L+ T
Sbjct: 710 THPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALITT 769
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P + I + K+ +C DCH+ K I+ +T REIIVRDS R H F NG C+C D+
Sbjct: 770 PAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDY 823
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 270/543 (49%), Gaps = 41/543 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+L + C N L +A+ +HA +V + + Q+ + LVN+Y GN+ A+ FD++
Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNR 115
Query: 139 NVVSWTSLISGYVQNSQPELAIHVF-LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+V +W +ISGY + I F L ML +G P T + L AC ++ G +I
Sbjct: 116 DVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKI 172
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H +K+ D V SL LY G++ +A F+ + +++ SW +I ++G A
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNA 232
Query: 258 VQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L LS+G++ + T+ S+ S C G +HS IK G S L V N
Sbjct: 233 KEAL-----TLSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ LY + G + + QK+FD M +L++WN++I + +L + L A+ +F
Sbjct: 288 LIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAY----ELNEQPL-------RAILLF 336
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKK 435
++ S ++PD T S+ +I S+L + + TL+ G FL D+ +G A+V MY K
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG--VRPNQVTFV 493
G ++ A VF + + +ISW ++I+G+A + + +A++++ M G + NQ T+V
Sbjct: 397 LGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWV 456
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKM 551
L ACS AG + + + ++ + K +D ++ L DM+ + G +++A ++
Sbjct: 457 SVLPACSQAGALRQGM---KLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI 513
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDI-----FVSA 604
N V W+ IA HG+ E +++L +KP D ++ LL V
Sbjct: 514 P-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLVDE 571
Query: 605 GRW 607
G W
Sbjct: 572 GEW 574
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/694 (33%), Positives = 396/694 (57%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + + +++ N+ +++ IHA +VK G + V L+++ K G + +
Sbjct: 197 EGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRD 256
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFDN+ + VSW S+I+G+V N Q A F +M AG PT+ T + + +C+S
Sbjct: 257 ARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCAS 316
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTT 246
L+ + L + +H +K + +V +L + C ++ A F+ + ++V+SWT
Sbjct: 317 LKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTA 376
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I +NG+ Q + FS M EG++PN FT ++I +V + + A+V IK
Sbjct: 377 MISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISEIHAEV----IKTN 432
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y + V +++ ++K G + +A K+F+ + +++ W+AM+AG+AQ +
Sbjct: 433 YEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETE------- 485
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
EA IF +L G+KP+ +TF SI+ C+ A +EQG+Q HA +K + + V
Sbjct: 486 ----EAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCV 541
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
++LV +Y K G IE A +F R L+SW SMI+G+A H + +AL++FE+M +
Sbjct: 542 SSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNL 601
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ +TF+G ++AC++AG+V + YF +M ++ I P M+HY C+ID++ R G + +A
Sbjct: 602 EVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAM 661
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
D I M F P +W + +A R H N+ELG AAE+++ L+P+ +Y +L +I+ +AG
Sbjct: 662 DIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIYAAAG 721
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
W + V+ L + ++ + +SWI +K+K YSF D HP S I+ L EL + +
Sbjct: 722 NWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHIYSKLSELNTRLR 781
Query: 666 CFGYKQQESF---ELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ ++ ++ DE+ ++ +HSE+LAIAFGL+ T P+ +VK+ +C DCH+
Sbjct: 782 DVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIPLQIVKNLRVCGDCHS 841
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
FIK+++ + R I+VRDS R H F G C+C D+
Sbjct: 842 FIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDY 875
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 269/536 (50%), Gaps = 31/536 (5%)
Query: 60 QEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
QEAL S+ G + + +L C + + E +H VK G V L
Sbjct: 84 QEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSL 143
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y K GN+ + ++VFD + +VVSW SL++GY N + +F M G P
Sbjct: 144 VDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDY 203
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ T + A ++ ++ +G QIHA VVK E + V NSL S+ S G L A F+
Sbjct: 204 YTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDN 263
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ K+ +SW ++I NG+ ++ F+ M G +P T S+ C ++ L +
Sbjct: 264 MENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLV 323
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQ 354
+H +K G ++N V ++M KC +D+A LF M V ++V+W AMI+G+ Q
Sbjct: 324 RVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQ 383
Query: 355 MMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG T +A+++FS + G+KP+ +T+S+ILT+ + E IHA
Sbjct: 384 ------------NGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFISE----IHAE 427
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+KT + VGTAL++ + K G I A +VF + T+ +I+W++M+ G+A + +A
Sbjct: 428 VIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEA 487
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--- 530
++F + G++PN+ TF + AC+ E F Y IK +++ +C
Sbjct: 488 AKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFH----AYAIKLRLNNALCVSS 543
Query: 531 -LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
L+ ++ + G IE A + K+ E + V W+ I+G +HG + E++ K
Sbjct: 544 SLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQHGQAKKALEVFEEMQK 598
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 244/469 (52%), Gaps = 26/469 (5%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ++FD P ++ L+ Y + Q + A+H+F+ + +G P + T+ L+ C+
Sbjct: 55 AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ +G+Q+H VK SVGNSL +Y+ G++ + F+ + +++V+SW ++
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ N Q F M EG +P+ +T++++ + ++ +G Q+H+L +KLG+
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V NS++ + K G++ +A+ +FD M + + V+WN+MIAGH + DL
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHV----INGQDL---- 286
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA F+ + +G KP TF+S++ C+ L L +H TLK+G ++ V T
Sbjct: 287 ---EAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343
Query: 428 ALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+ KC I+ A +F M ++++SWT+MI+G+ + + QA+ LF M GV+
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVK 403
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
PN T+ L +A + E + E+++ Y+ + L+D FV++G I +A
Sbjct: 404 PNHFTYSTILTV-QHAVFISEI--HAEVIKTNYEKSSSVG--TALLDAFVKIGNISDAVK 458
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
F+ I+ D + WS +AG + G E QL + +KP +
Sbjct: 459 VFELIETKDV----IAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNE 503
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/693 (34%), Positives = 387/693 (55%), Gaps = 25/693 (3%)
Query: 72 VQTSSY-VSLLQECV-NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
V+ +Y +S + +C+ S+ + E++H + K G V L+ Y K ++A
Sbjct: 192 VRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAI 251
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VFD +P +V+SW S+ISG N + AI +F+ M G + TL + L AC+ L
Sbjct: 252 LVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELH 311
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ LG+ +H Y VK TS+ N L +YS C S K F + +KNV+SWT +I
Sbjct: 312 LLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMIT 371
Query: 250 ACGENG--EAVQGLRFFSKMLSEGIQPNEFTLTS-ISSVCGTMLSLRVGAQVHSLGIKLG 306
+ G + V GL F +M EG +P+ F +TS + + G L L+ G VH I+ G
Sbjct: 372 SYTRAGLYDKVAGL--FQEMGLEGTRPDIFAITSALHAFAGNEL-LKHGKSVHGYAIRNG 428
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
L V N++M +Y+KCG ++EA+ +FDG+ ++++WN +I G+ S +
Sbjct: 429 MEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGY-----------SRN 477
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
N EA S+F+++ ++P+ T + IL + L +LE+G ++HA L+ G+L D V
Sbjct: 478 NLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVA 536
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL++MY KCG + A R+F +S + LISWT M+ G+ H A+ LFE M ++G+
Sbjct: 537 NALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIA 596
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ +F L ACS++G+ E +F+ M+KE+KI+P + HY C++D+ + G ++EA++
Sbjct: 597 PDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYE 656
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI M EP+ IW + GCR H N++L AE++ +L+P++ Y +L +I+ A R
Sbjct: 657 FIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAER 716
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
WE V +KN L E SWI K KV+ F ++ HPQ I + L+E+ ++ +
Sbjct: 717 WEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQE 776
Query: 667 FGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
G+ ++ + L ++A HS KLA+AFG+LN I V K++ +C CH
Sbjct: 777 EGHDPKKKYALMGADNAVHGEALCGHSSKLAVAFGVLNLSEGRLIRVTKNSRVCSHCHEA 836
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + +REII+RDS R H F G C+CR +
Sbjct: 837 AKFISKMCSREIILRDSNRFHHFEQGRCSCRGY 869
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 152/539 (28%), Positives = 262/539 (48%), Gaps = 31/539 (5%)
Query: 55 RSLGFQEALSVL-TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS----HQDF 109
RS +EAL +L ++G V SY ++LQ C +SL + H +V+ S D
Sbjct: 73 RSGDLEEALGLLGSDG--VDDRSYGAVLQLCSEVRSLEGGKRAH-FLVRASSLGRDGMDN 129
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+ LV +Y KCG++E A++VFD +P++ +V WT+L+SGY + + +F M
Sbjct: 130 VLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHC 189
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P T+ L + L SI G+ +H + K +VGN+L + Y+
Sbjct: 190 CGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKD 249
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
AI F+ + ++V+SW ++I C NG + + F +M EG + + TL S+ C
Sbjct: 250 AILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAE 309
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ L +G VH +K G+ S + N ++ +Y C K+F M N+V+W AM
Sbjct: 310 LHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAM 369
Query: 349 IAGH--AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
I + A + D + +F ++ G +PD++ +S L + L+
Sbjct: 370 ITSYTRAGLYD-------------KVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKH 416
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G+ +H ++ G + V AL+ MY KCG +E A +F + ++ +ISW ++I G++
Sbjct: 417 GKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSR 476
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
++L+++A LF +MLL +RPN VT L A ++ + EM + + D
Sbjct: 477 NNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGR---EMHAYALRRGYLED 532
Query: 527 HYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
++ LIDM+V+ G + A ++ N + W++ +AG HG EQ+
Sbjct: 533 DFVANALIDMYVKCGALLLARRLFDRLS-NKNLISWTIMVAGYGMHGRGRDAIALFEQM 590
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 181/332 (54%), Gaps = 12/332 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ +++ +S+L C L ++H + VKTG + L+++Y C +
Sbjct: 291 EGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRS 350
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
K+F N+ + NVVSWT++I+ Y + + +F +M G P + +AL A +
Sbjct: 351 TNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAG 410
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
E ++ GK +H Y ++ E +V N+L +Y CG++ A F+ + K+++SW T+
Sbjct: 411 NELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTL 470
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG N A + F++ML + ++PN T+T I ++ SL G ++H+ ++ GY
Sbjct: 471 IGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGY 529
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V N+++ +Y+KCG + A++LFD +S+ NL++W M+AG+ H
Sbjct: 530 LEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGM-----------HG 578
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
G +A+++F ++ SG+ PD +FS+IL CS
Sbjct: 579 RGRDAIALFEQMRVSGIAPDAASFSAILYACS 610
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Glycine max]
Length = 1047
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/681 (33%), Positives = 383/681 (56%), Gaps = 16/681 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + +L + H++ +K G D + L+++Y KC +++ A + F +
Sbjct: 377 SLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE 436
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV W ++ Y + +F M G P T + L CSSL ++ LG+QIH
Sbjct: 437 NVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIH 496
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
V+K + + V + L +Y+ G L+ A+K F R++EK+V+SWT +I ++ +
Sbjct: 497 TQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFA 556
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F +M +GI + S S C + +L G Q+H+ GY+ +L V N+++
Sbjct: 557 EALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALV 616
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG V +A FD + + ++WN++I+G AQ S H EALS+FS+
Sbjct: 617 SLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQ---------SGH--CEEALSLFSQ 665
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ +G + + +TF ++ + + ++ G+QIHA+ +KTG S+ V L+ +Y KCG
Sbjct: 666 MSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGN 725
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
I+ A R F EM + ISW +M+TG++ H +AL LFEDM GV PN VTFVG L+A
Sbjct: 726 IDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSA 785
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E + YF+ M++ + + P +HY C++D+ R G + A F+++M +P+ +
Sbjct: 786 CSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAM 845
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+ ++ C H N+++G +AA LL+L+PKD +Y +L +++ G+W + + +
Sbjct: 846 VCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMK 905
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + + SWI + + V++F D HP +I++ L +L E A GY Q + L
Sbjct: 906 DRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLN 965
Query: 679 DEE-----SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
D E + HSEKLAIAFGLL+ +PI V K+ +C DCHN+IK ++ ++ R I
Sbjct: 966 DAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVI 1025
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
+VRDS R H F G C+C+D+
Sbjct: 1026 VVRDSYRFHHFKGGICSCKDY 1046
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/514 (30%), Positives = 278/514 (54%), Gaps = 20/514 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L E K +Y +L+ C E IHA + G FV L+++Y K G
Sbjct: 160 MLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNG 219
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ A+KVFD L + + VSW +++SG Q+ E A+ +F M +G YPT + L+
Sbjct: 220 FLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLS 279
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ +E ++G+Q+H V+K +T V N+L +LYS G+ A + FN + +++ +S
Sbjct: 280 ACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVS 339
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ ++I + G + + L F KM + ++P+ T+ S+ S C ++ +L VG Q HS I
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G +S++ + +++ LY+KC + A + F N+V WN M+ + + +L
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNL----- 454
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
E+ IF+++ G++P+ +T+ SIL CS L A++ GEQIH LKTGF +V
Sbjct: 455 ------NESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNV 508
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V + L++MY K G+++ A ++F + + ++SWT+MI G+A H +AL LF++M
Sbjct: 509 YVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQ 568
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGC 540
G+ + + F A++AC AG+ +AL + + + + D L+ ++ R G
Sbjct: 569 GIHSDNIGFASAISAC--AGI--QALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGK 624
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ +A+ K+ F + + W+ I+G + G+ E
Sbjct: 625 VRDAYFAFDKI-FSKDNISWNSLISGFAQSGHCE 657
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/508 (31%), Positives = 263/508 (51%), Gaps = 26/508 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ S+L C + E +H ++K G + +V LV +Y + GN A++VF+ +
Sbjct: 274 FSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAML 333
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ + VS+ SLISG Q + A+ +F M P VT+ + L+ACSS+ ++ +GKQ
Sbjct: 334 QRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQ 393
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
H+Y +K D + +L LY C + +A + F +NV+ W ++ A G
Sbjct: 394 FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDN 453
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ + F++M EGI+PN+FT SI C ++ ++ +G Q+H+ +K G+ N+ V +
Sbjct: 454 LNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSV 513
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G +D A K+F + ++V+W AMIAG+AQ H EAL++F
Sbjct: 514 LIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQ-----------HEKFAEALNLF 562
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G+ D F+S ++ C+ + AL QG+QIHA +G+ D+ VG ALV++Y +C
Sbjct: 563 KEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARC 622
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF---- 492
G++ A F ++ ++ ISW S+I+GFA +AL LF M AG N TF
Sbjct: 623 GKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAV 682
Query: 493 -VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
A A G A+ E ++ V LI ++ + G I++A +M
Sbjct: 683 SAAANVANVKLGKQIHAMIIKTGHDSETEVSNV------LITLYAKCGNIDDAERQFFEM 736
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYA 579
E NE+ W+ + G +HG+ GF A
Sbjct: 737 P-EKNEISWNAMLTGYSQHGH---GFKA 760
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 253/507 (49%), Gaps = 20/507 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
G + + +Y+ LL C++ S+ +H I+K G + + L+++Y G+++
Sbjct: 62 RGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDG 121
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VFD +P + W ++ +V + +F ML+ P T L C
Sbjct: 122 AVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG 181
Query: 188 LE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ ++IHA + + E+ V N L LY G LNSA K F+ +++++ +SW
Sbjct: 182 GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVA 241
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ ++G + + F +M + G+ P + +S+ S C + +VG Q+H L +K G
Sbjct: 242 MLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG 301
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
++ V N+++ LY + G A+++F+ M + V++N++I+G LS
Sbjct: 302 FSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISG-----------LSQQ 350
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
+AL +F K+ +KPD T +S+L+ CS + AL G+Q H+ +K G SD+++
Sbjct: 351 GYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILE 410
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+++Y KC I+ A F+ T ++ W M+ + +++ ++F M + G+
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 487 PNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
PNQ T+ L CS+ V LG + ++++ ++ + LIDM+ +LG ++
Sbjct: 471 PNQFTYPSILRTCSSLRAV--DLGEQIHTQVLKTGFQFNVYVSS--VLIDMYAKLGKLDH 526
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRH 570
A +++ E + V W+ IAG +H
Sbjct: 527 ALKIFRRLK-EKDVVSWTAMIAGYAQH 552
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/426 (28%), Positives = 207/426 (48%), Gaps = 22/426 (5%)
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
T+L Y + I+ M E G + T L C S G ++H ++K
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ + L LY G L+ A+ F+ + + + W V+ A + L
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTM-LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
F +ML E ++P+E T + CG + ++H+ I GY ++L V N ++ LY
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYF 216
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
K G ++ A+K+FDG+ + V+W AM++G LS EA+ +F ++++S
Sbjct: 217 KNGFLNSAKKVFDGLQKRDSVSWVAMLSG-----------LSQSGCEEEAVLLFCQMHTS 265
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G+ P Y FSS+L+ C+++ + GEQ+H L LK GF + V ALV +Y + G A
Sbjct: 266 GVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPA 325
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+VF M R +S+ S+I+G + S +AL+LF+ M L ++P+ VT L+ACS+
Sbjct: 326 EQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSV 385
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
G + + Y IK M + L+D++V+ I+ A +F + E N V
Sbjct: 386 GALLVGKQF-----HSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE-NVV 439
Query: 559 IWSVFI 564
+W+V +
Sbjct: 440 LWNVML 445
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
S G ++ + G++ + T+ +L C G ++H LK GF ++V
Sbjct: 44 SNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEV 103
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V+ L+++Y G ++ A VF EM R L W ++ F ++ + L LF ML
Sbjct: 104 VLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQE 163
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCI 541
V+P++ T+ G L C + + + + + + ++C LID++ + G +
Sbjct: 164 KVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSL--FVCNPLIDLYFKNGFL 221
Query: 542 EEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
A FD ++K D V W ++G + G E
Sbjct: 222 NSAKKVFDGLQKRD----SVSWVAMLSGLSQSGCEE 253
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/694 (35%), Positives = 376/694 (54%), Gaps = 19/694 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ V++L C + IH VK G +D V LV++Y KCG + E
Sbjct: 128 EGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTE 187
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACS 186
AQ +FD R N VSW ++I G A ++F +M + N VT+ L AC
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ +R K++H Y +++ + D V N + Y+ CG L A + F + K V SW
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG C +NG+ + L + +M G+ P+ FT+ S+ + SLR G +VH ++ G
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ + S++ LY+ CG A+ LFDGM + V+WNAMI+G++Q
Sbjct: 368 LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQ------------ 415
Query: 367 NGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG E AL +F KL S G +P S+L CS+ AL G++ H LK + DV V
Sbjct: 416 NGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFV 475
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+ ++MY K G I+ + VF + + L SW ++I + H ++++LFE M G
Sbjct: 476 ACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQ 535
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
P+ TF+G L CS+AG+V E L YF MQ + I+P ++HY C++DM R G +++A
Sbjct: 536 MPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDAL 595
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ +M +P+ +WS ++ CR G +E+G AE+LL+L+PK+ E+Y L +++ +G
Sbjct: 596 RLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSG 655
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
RW+DV V+ + ++ L + SWI + KV+SF D L PQS E+ +L +K
Sbjct: 656 RWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMC 715
Query: 666 CFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GYK S L D +E + HSEKLAI FGLLNT + + + K+ +C DCHN
Sbjct: 716 KIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHN 775
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K ++ +T REII+RD+KR H F +G C+C D+
Sbjct: 776 ASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDY 809
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 274/548 (50%), Gaps = 37/548 (6%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +++ C E+IH ++K G D FV L+ +YGK G ++ A KVF +
Sbjct: 33 TFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYM 92
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACSSLESIRL 193
P N+VSW S+ISG+ +N + + ++M+ E G P TL T L C+ +++
Sbjct: 93 PVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQM 152
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G +IH VK +D V NSL +YS CG L A F++ KN +SW T+IG
Sbjct: 153 GIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCT 212
Query: 254 NGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G + F +M + E I+ NE T+ +I C + LR ++H I+ G+ +
Sbjct: 213 KGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDEL 272
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V N + Y KCG++ A+++F M + +WNA+I G AQ D K A
Sbjct: 273 VANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRK-----------A 321
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L+++ ++ SG+ PD +T S+L + L +L G+++H L+ G D +G +L+++
Sbjct: 322 LNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSL 381
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y CG A +F M ++ +SW +MI+G++ + L AL LF ++ G +P+ +
Sbjct: 382 YIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAV 441
Query: 493 VGALAACSNAGMVYEALGYFEMMQKE---YKIKPVM--DHYMCL--IDMFVRLGCIEEA- 544
V L ACS + + KE Y +K ++ D ++ IDM+ + GCI+E+
Sbjct: 442 VSVLGACSQQSAL--------RLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESR 493
Query: 545 --FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL-KPKDCESYAMLLDIF 601
FD +K D W+ IA HG+ E E++ K+ + D ++ +L +
Sbjct: 494 SVFDGLKNKDLAS----WNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVC 549
Query: 602 VSAGRWED 609
AG E+
Sbjct: 550 SHAGLVEE 557
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 211/405 (52%), Gaps = 25/405 (6%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+ E +V + +++L C+ L + + +H + ++ G D V V Y KCG +
Sbjct: 228 MQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGML 287
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A++VF ++ V SW +LI G QN P A+++++ M +G P T+G+ L A
Sbjct: 288 ICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLAS 347
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ L+S+R GK++H +V+++ E D+ +G SL SLY CG +SA F+ + EK+ +SW
Sbjct: 348 AHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWN 407
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I +NG L F K++S+G QP++ + S+ C +LR+G + H +K
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKA 467
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
++ V S + +Y K G + E++ +FDG+ + +L +WNA+IA +
Sbjct: 468 LLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYG-----------V 516
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-------EQIHALTLKTG 418
H G E++ +F ++ G PD +TF ILT+CS +E+G + H + K
Sbjct: 517 HGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLE 576
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
+ +++M + GR++ A R+ EM + W+S+++
Sbjct: 577 HYA------CVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLS 615
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 212/421 (50%), Gaps = 25/421 (5%)
Query: 159 AIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
AI +F+ ++ + N T + AC+ LG+ IH V+K D VGN+L
Sbjct: 14 AIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALI 73
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS--EGIQPN 275
++Y G +++A+K F+ + +N++SW ++I ENG + +M++ EG+ P+
Sbjct: 74 AMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPD 133
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
TL ++ VC + +++G ++H L +KLG + ++RV NS++ +Y KCG + EAQ LFD
Sbjct: 134 IATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFD 193
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL----YTF 391
+ N V+WN MI G L EA ++F ++ M+ D+ T
Sbjct: 194 KNNRKNAVSWNTMIGG-----------LCTKGYIFEAFNLFREMQ---MQEDIEVNEVTV 239
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+IL C + L +++H +++ GF D +V V Y KCG + A RVF M T
Sbjct: 240 LNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET 299
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALG 510
+T+ SW ++I G A + +AL L+ M +G+ P+ T L A ++ + Y
Sbjct: 300 KTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ +++ +I + + L+ +++ G A M+ E + V W+ I+G ++
Sbjct: 360 HGFVLRHGLEIDSFIG--ISLLSLYIHCGESSSARLLFDGME-EKSSVSWNAMISGYSQN 416
Query: 571 G 571
G
Sbjct: 417 G 417
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 370 TEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
++A+ +F KL + D +TF ++ C+ + GE IH + +K G L DV VG A
Sbjct: 12 SDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNA 71
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA--GVR 486
L+ MY K G ++ A +VF M R L+SW S+I+GF+ + S + +M+ G+
Sbjct: 72 LIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLL 131
Query: 487 PNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
P+ T V L C+ G+ L + ++ ++ L+DM+ + G +
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNN------SLVDMYSKCGYL 185
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAG 566
EA K + N V W+ I G
Sbjct: 186 TEAQMLFDKNN-RKNAVSWNTMIGG 209
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 111/274 (40%), Gaps = 44/274 (16%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++++G + + VS+L C + +L + H + +K +D FV +++Y K G
Sbjct: 429 LVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGC 488
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++E++ VFD L ++ SW ++I+ Y + E +I +F M + G P T LT
Sbjct: 489 IKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTV 548
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-----EK 239
CS HA G + +K FN ++ E
Sbjct: 549 CS-----------HA------------------------GLVEEGLKYFNEMQNFHGIEP 573
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ + V+ G G LR +M QP+ +S+ S C L +G V
Sbjct: 574 KLEHYACVMDMLGRAGRLDDALRLVHEMPE---QPDSRVWSSLLSFCRNFGELEIGQIVA 630
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
++L N+ S+ LY G D+ +++
Sbjct: 631 EKLLEL-EPKNVENYVSLSNLYAGSGRWDDVRRV 663
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/703 (33%), Positives = 387/703 (55%), Gaps = 21/703 (2%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL + L G K ++ +L+ C +L IH H+++ G D V+
Sbjct: 188 FDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNA 247
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCG++ A+ VFD +P + +SW ++ISGY +N + +F M++ P
Sbjct: 248 LITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPD 307
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ + +TAC L RLG+QIH YV++ + D S+ NSL +YS+ G + A F+
Sbjct: 308 LMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFS 367
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R ++++SWT +I + L + M +EGI P+E T+ + S C + +L +
Sbjct: 368 RTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDM 427
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H + + G S V NS++ +Y KC +D+A ++F N+V+W ++I G
Sbjct: 428 GMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILG--- 484
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L +N EAL F ++ +KP+ T +L+ C+R+ AL G++IHA
Sbjct: 485 --------LRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHA 535
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
L+TG D + A+++MY +CGR+E A + F + + SW ++TG+A A
Sbjct: 536 LRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHAT 594
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LF+ M+ + V PN+VTF+ L ACS +GMV E L YF M+ +Y I P + HY C++D+
Sbjct: 595 ELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDL 654
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G +EEA++FI+KM +P+ +W + CR H ++ELG AAE + + Y
Sbjct: 655 LGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYY 714
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ G+W+ VA V+ + R+ L SW+ +K V++F +D HPQ EI
Sbjct: 715 ILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEIN 774
Query: 655 KVLDELVEKAKCFGYKQQES--FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVK 710
+L+ +K K G + ES ++ + A ++ HSE+LAI FGL+N+ PI V K
Sbjct: 775 ALLERFYKKMKEAGVEGPESSHMDIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTK 834
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
+ MC+ CHN +K I+ REI VRD+++ H F G C+C D
Sbjct: 835 NLYMCQSCHNIVKFISREVRREISVRDAEQFHHFKGGICSCTD 877
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/517 (27%), Positives = 267/517 (51%), Gaps = 22/517 (4%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V+ +YV+L++ C +++ +++++ + SH + L++++ + GN+ +A V
Sbjct: 104 VEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYV 163
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + + N+ SW L+ GY + + A+ ++ ML G P T L C + ++
Sbjct: 164 FGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNL 223
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G++IH +V++Y E D V N+L ++Y CG +N+A F+++ ++ +SW +I
Sbjct: 224 VRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGY 283
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
ENG ++GLR F M+ + P+ T+TS+ + C + R+G Q+H ++ + +
Sbjct: 284 FENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDP 343
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ NS++ +Y GL++EA+ +F +LV+W AMI+G+ + K
Sbjct: 344 SIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK----------- 392
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL + + + G+ PD T + +L+ CS L L+ G +H + + G +S +V +L++
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLID 452
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KC I++A +F + ++SWTS+I G ++ +AL F +M + ++PN VT
Sbjct: 453 MYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVT 511
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIK 549
V L+AC+ G + E+ + D +M ++DM+VR G +E A+
Sbjct: 512 LVCVLSACARIGALTCGK---EIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFF 568
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+D E W++ + G G G +A E ++
Sbjct: 569 SVDHEVTS--WNILLTGYAERGK---GAHATELFQRM 600
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/673 (35%), Positives = 378/673 (56%), Gaps = 22/673 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNV--YGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
+S + IHA +++TG D F + +V + G+++ A+ VF +P + S+I
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
G + + A+ + +M+ G P T + +C + GKQIH + K
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFA 117
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
DT N+L ++YS CG L SA K F+++ +K V+SW T+IG + + + +R F +M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 268 L-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
+ SE ++PNE TL ++ + C L + ++H + G+ ++ + +M +Y KCG
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
V A+ LFD NL +WN MI GH + + EAL +F ++ + G+K
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVE-----------DSNYEEALLLFREMQTKGIKG 286
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D T +S+L C+ L ALE G+ +HA K DV +GTALV+MY KCG IE A +VF
Sbjct: 287 DKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVF 346
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
EM + +++WT++I G A + ALQ F++M + GV+P+ +TFVG LAACS+AG V
Sbjct: 347 HEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVD 406
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E + +F M Y I+P ++HY L+D+ R G I EA + IK M P++ + +
Sbjct: 407 EGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGA 466
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR HGN+E AA+QLL++ P +Y +L +I+ S+ +WE+ + L E + +
Sbjct: 467 CRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPP 526
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESA 683
S I + V+ F D H QS+EI ++L++++ K K GY +S F++ +EE
Sbjct: 527 GCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKE 586
Query: 684 S--VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
+ HSEKLAIAFGLL+T + +PI VVK+ +C DCH+ K+I+ L REIIVRD R
Sbjct: 587 TELSLHSEKLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRF 646
Query: 742 HKFVNGHCTCRDF 754
H F +G C+CR F
Sbjct: 647 HHFKDGTCSCRGF 659
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/396 (27%), Positives = 193/396 (48%), Gaps = 20/396 (5%)
Query: 60 QEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
QEAL ++ +G ++ SL + C N S + IH H K G D + L
Sbjct: 70 QEALLFYQEMMVQGLIPDRYTFPSLFKSCRNS---SEGKQIHCHSTKLGFASDTYAQNTL 126
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PT 174
+N+Y CG + A+KVFD + VVSW ++I + Q QP A+ +F M+++ N P
Sbjct: 127 MNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPN 186
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VTL LTAC+ + + K+IH Y+ ++ + L +Y CG + A F+
Sbjct: 187 EVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFD 246
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ +EKN+ SW +I E+ + L F +M ++GI+ ++ T+ S+ C + +L +
Sbjct: 247 KAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALEL 306
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H+ K ++ + +++ +Y KCG ++ A ++F M +++TW A+I G
Sbjct: 307 GKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILG--- 363
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHAL 413
L+ AL F +++ G+KPD TF +L CS +++G +++
Sbjct: 364 --------LAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ G + LV++ + GRI A + M
Sbjct: 416 SDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM 451
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/696 (34%), Positives = 384/696 (55%), Gaps = 18/696 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G K + ++ S+L+ + +H I K G + V+ L++ Y
Sbjct: 242 MLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRK 301
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ AQK+FD L +V+SW S+ISGYV+N + I +F+ ML G T+ A
Sbjct: 302 VRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVA 361
Query: 185 CSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C+++ ++ LGK +H+Y +K T D + N+L +YS CG LNSAI+ F R+ EK V+S
Sbjct: 362 CANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVS 421
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
WT++I G + ++ F +M S G+ P+ + +TSI + C +L+ G VH
Sbjct: 422 WTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIR 481
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ +N V N++ +Y KCG + +A +F M ++++WN MI G+ K+ L
Sbjct: 482 ENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYT------KNSL 535
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EAL++F+++ KPD T + IL C+ L AL++G +IH L+ G+ D
Sbjct: 536 P-----NEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDK 589
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V A+V+MY KCG + A +F + + L+SWT MI G+ H +A+ F M +
Sbjct: 590 YVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMT 649
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+ P++V+F+ L ACS++G++ E F +M+KE +I+P ++HY C++D+ R G + +
Sbjct: 650 GIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVK 709
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A FIK M +P+ IW + GCR H +++L AE++ +L+P++ Y +L +I+
Sbjct: 710 AHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAE 769
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A +WE+V ++ + L + SWI IK K+ F D PQ+ +I +L L K
Sbjct: 770 AEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSK 829
Query: 664 AKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GY + ++ L ++E A HSEKLA+AFG+LN P I V K+ +C DC
Sbjct: 830 MKEEGYSPKTAYALLNADEREKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDC 889
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K ++ +REII+RDS R H F +G C+CR +
Sbjct: 890 HEMAKFMSKSASREIILRDSSRFHHFKDGSCSCRGY 925
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 151/505 (29%), Positives = 256/505 (50%), Gaps = 31/505 (6%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S+LQ C RKS+ + + + I +G D + LV +Y KCG+++E + VFD L
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ W +IS Y + +I++F MLE G P + T + L +++ + G+
Sbjct: 212 SESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGR 271
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H + K +V NSL S Y + A K F+ + +++V+SW ++I +NG
Sbjct: 272 QVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNG 331
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVR 314
+G+ F KML G+ + T+ ++ C + +L +G +HS IK +R
Sbjct: 332 LDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFN 391
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y KCG ++ A ++F+ M +V+W +MI G+ ++ LS A+
Sbjct: 392 NTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGY------VREGLS-----DGAIK 440
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ S G+ PD+Y +SIL C+ L+ G+ +H + ++ V AL +MY
Sbjct: 441 LFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYA 500
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG ++ A VF M + +ISW +MI G+ +SL ++AL LF +M +P+ T
Sbjct: 501 KCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVAC 559
Query: 495 ALAACSNAGMV---YEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA---FD 546
L AC++ + E GY ++ Y D Y+ ++DM+V+ G + A FD
Sbjct: 560 ILPACASLAALDKGREIHGY--ALRNGYS----EDKYVTNAVVDMYVKCGLLVLARSLFD 613
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHG 571
I D V W+V IAG HG
Sbjct: 614 MIPNKDL----VSWTVMIAGYGMHG 634
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 225/413 (54%), Gaps = 15/413 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS-HQDFFVMTFLV 116
G + + +L G + ++ V++ C N +L +++H++ +K + ++ L+
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG++ A +VF+ + VVSWTS+I+GYV+ + AI +F +M G P
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + L AC+ +++ GK +H Y+ + E ++ V N+L +Y+ CGS+ A F+ +
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++K+V+SW T+IG +N + L F++M E +P+ T+ I C ++ +L G
Sbjct: 516 KKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGR 574
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H ++ GY+ + V N+++ +Y+KCGL+ A+ LFD + + +LV+W MIAG+
Sbjct: 575 EIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGM-- 632
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G+EA++ F+++ +G++PD +F SIL CS L++G +I + K
Sbjct: 633 ---------HGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKK 683
Query: 417 TGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
+ + A +V++ + G + +A + M + + W +++ G H
Sbjct: 684 ECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIH 736
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
DL + SIL +C+ ++ G ++ ++ +G + D ++G LV MY KCG ++ VF
Sbjct: 149 DLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVF 208
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
++S + W MI+ ++ +++ LF+ ML G++PN TF L + V
Sbjct: 209 DKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVE 268
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFV-------RLGCIEEAFDFIKKMDFEPNEVI 559
E ++ K + Y +++ + ++ C ++ FD + D +
Sbjct: 269 EGRQVHGLI-----CKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDV----IS 319
Query: 560 WSVFIAGCRRHG 571
W+ I+G ++G
Sbjct: 320 WNSMISGYVKNG 331
>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
Length = 706
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 234/699 (33%), Positives = 380/699 (54%), Gaps = 21/699 (3%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+ L + V ++Q C +L+ IH I + G D +V LV +YGK
Sbjct: 22 AIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGK 81
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG++EEA+ VF+ P NV SWT LI+ Q+ + + A+ +F +ML+ G P +V+ A
Sbjct: 82 CGSLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAA 141
Query: 182 LTACSS-LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
+ ACS+ E + G+ +HA + +Y +D SL S+YS CGSL ++K F + E N
Sbjct: 142 INACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELN 201
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW +I A E+ ++ LR KM EGI+ T ++ S L+ +H
Sbjct: 202 AVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHD 261
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
++ G+ + V N I+ +Y KCG + +A+ +F MS +++ WN MIA ++Q
Sbjct: 262 CILRTGFDQD--VVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQ------ 313
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H +EAL + + G+ PD YT+ S++ C+ L +E G+Q+H F
Sbjct: 314 -----HGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAF- 367
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ +LVNMY KCG ++ A +F + + + ++W +MI +A HS QA +LF M
Sbjct: 368 QVTELANSLVNMYGKCGILDVARSIF-DKTAKGSVTWNAMIGAYAQHSHEQQAFELFLLM 426
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
L G P+ +TF+ L+AC+NAG+ EA YF MQ+++ ++P HY C+++ + G
Sbjct: 427 RLDGEEPSYITFMSVLSACANAGLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGR 486
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ +A I+ M FEP+ + W+ F+A CR HG+M+ G +AA+ +++ P+ Y L I
Sbjct: 487 LSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARI 546
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
AG +++ + ++ L + + + S I++ VY F D +P+S EIF L L
Sbjct: 547 HADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRL 606
Query: 661 VEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
++ K GY + D E+ HSE+LAIAFG+++T +P+ ++K+ +C
Sbjct: 607 DKEMKRAGYDPDMTHVAHDVEAGQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVC 666
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH K+ + +T REIIVRDS R H F NG C+C+DF
Sbjct: 667 GDCHAMTKLTSKITRREIIVRDSNRFHHFKNGSCSCKDF 705
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/775 (30%), Positives = 407/775 (52%), Gaps = 97/775 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTG-------------------------------- 104
Y LLQ C + S IHAH VK G
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 105 -----SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA 159
+ ++ F L+++Y K G + +A VF +P + VSWT +I G ++ + A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
+ FLDM+ G P+ TL L++C+++E+ +G+++H +VVK V NS+ +
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391
Query: 220 YSTCGSLNSAIKAFNRIR-------------------------------EKNVMSWTTVI 248
Y CG +A F R++ E++++SW T+I
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451
Query: 249 GACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+NG L+FFS+MLS ++P+ FT+TS+ S C + L++G Q+HS ++ G
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGM 511
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMD-------- 357
+ ++ N+++ Y K G V+ A+++ D ++ +N++++ A++ G+ ++ D
Sbjct: 512 PCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIF 571
Query: 358 --LAKDDLSA--------HNGGT--EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+ D+ A H G EA+ +F + G +P+ +T +++L+ C+ L L+
Sbjct: 572 DIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLD 631
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGF 464
G+QIH +++ V V A++ +Y + G + A RVF ++ R I+WTSMI
Sbjct: 632 YGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAM 691
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H L QA+ LFE+M+ GV+P+ +T+VG L+AC++AG V + Y+E MQ E+ I P
Sbjct: 692 AQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQ 751
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
M HY C++D+ R G + EA +FI++M P+ V+W +A CR N +L AA +LL
Sbjct: 752 MSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLL 811
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+ P + +Y+ L +++ + GRW D A + L +++ + + +SW ++ KV+ F +D
Sbjct: 812 SIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADD 871
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
LHPQ I++ E+ E+ K G+ + L D +E HSEKLAIAFGL++
Sbjct: 872 VLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLIS 931
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP + + ++K+ +C DCH IK I+ REIIVRD+ R H F +G+C+C+D+
Sbjct: 932 TPEKTTLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDY 986
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/540 (22%), Positives = 242/540 (44%), Gaps = 91/540 (16%)
Query: 55 RSLGFQEA----LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
RS F +A L +++EG + ++L C ++ +H +VK G
Sbjct: 324 RSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVP 383
Query: 111 VMTFLVNVYGKCGNMEEAQKV-------------------------------FDNLPRIN 139
V ++ +YGKCG+ E A+ V F+N+ +
Sbjct: 384 VANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERS 443
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIH 198
+VSW ++I+GY QN +A+ F ML A + P T+ + L+AC++L +++GKQ+H
Sbjct: 444 IVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMH 503
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK--------------------------- 231
+Y+++ + + N+L S Y+ GS+ +A +
Sbjct: 504 SYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGD 563
Query: 232 ------AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
F+ + ++V++WT +I +NG+ + + F M+ G +PN TL ++ S
Sbjct: 564 TKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSA 623
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
C ++ L G Q+H I+ ++ V N+I+ +Y + G V A+++FD + +T
Sbjct: 624 CASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT 683
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
W +MI AQ H G +A+ +F ++ G+KPD T+ +L+ C+ +
Sbjct: 684 WTSMIVAMAQ-----------HGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFV 732
Query: 405 EQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMIT 462
++G++ + + + G + + +V+++ + G + A M + W S++
Sbjct: 733 DKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLA 792
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+ A +L LL+ + P+ GA +A +N VY A G + + +K++
Sbjct: 793 ACRVRKNADLA-ELAAGKLLS-IDPHN---SGAYSALAN---VYSACGRWNDAARIWKLR 844
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/665 (33%), Positives = 374/665 (56%), Gaps = 17/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +VK G + + L+ +Y + G E+A+ VF + +++SW S+++ YVQ+ +
Sbjct: 1070 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 1129
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ + ++L+ G +VT +AL ACS+ E + K +HA ++ D VGN+
Sbjct: 1130 CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 1189
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L ++Y G + A K + + + ++W +IG EN E + ++ + + +GI N
Sbjct: 1190 LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 1249
Query: 276 EFTLTSISSVCGTMLSL-RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
T+ S+ C L + G +H+ + G+ S+ V+NS++ +Y KCG ++ + +F
Sbjct: 1250 YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 1309
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
DG+ + + +TWNAM+A +A H G EAL IF ++ + G+ D ++FS
Sbjct: 1310 DGLGNKSPITWNAMVAANAH-----------HGCGEEALKIFGEMRNVGVNLDQFSFSGG 1358
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L + L LE+G+Q+H L +K GF SD+ V A ++MY KCG + ++ + R+
Sbjct: 1359 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 1418
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SW +I+ FA H +A + F +ML G +P+ VTFV L+AC++ G+V E L Y++
Sbjct: 1419 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDS 1478
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M +E+ + P ++H +C+ID+ R G + A FIK+M PN++ W +A CR HGN+E
Sbjct: 1479 MTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLE 1538
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AE LL+L P D +Y + ++ ++G+WEDV ++ + + SW+++K
Sbjct: 1539 LARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLK 1598
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSE 689
DKV+SF + HPQ++ I L EL++ K GY SF L D +E Y HSE
Sbjct: 1599 DKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSE 1658
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LA+AFGL+NTP S + + K+ +C DCH+ K ++ + R+I++RD R H F G C
Sbjct: 1659 RLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKC 1718
Query: 750 TCRDF 754
+C D+
Sbjct: 1719 SCGDY 1723
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 201/601 (33%), Positives = 313/601 (52%), Gaps = 17/601 (2%)
Query: 61 EALSVLTEGP-KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
EAL +L+ P ++ S Y+ +LQ C+++K+ +IH H++ G D + T L+ Y
Sbjct: 16 EALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFY 75
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
K G++ A+ VFD +P +VVSWT+++SGY QN + E A +F DM G T G
Sbjct: 76 VKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYG 135
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+AL AC+SL + +G Q+ + K + ++ V ++L +S CG + A F + E+
Sbjct: 136 SALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMER 195
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+V+SW +IG G A F ML G+ P+ +TL S+ L + Q+H
Sbjct: 196 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIH 255
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ +LGY S V ++ Y K G + A+ L GM +L + A+I G+A
Sbjct: 256 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA------ 309
Query: 360 KDDLSAHNG--GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
H G +AL +F ++N + D S+L IC+ L + G QIHA LK
Sbjct: 310 ------HEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKY 363
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
DV +G AL++MY K G IE A R F EM + +ISWTS+I+G+A H H A+ L+
Sbjct: 364 QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLY 423
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
+ M G +PN VTF+ L ACS+ G+ E F M +Y IKP +HY C++D+F R
Sbjct: 424 KKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFAR 483
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G +EEA++ + K+D + N +W + +G M LG AA L ++P++ +Y +L
Sbjct: 484 QGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVL 543
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
I+ +AG W+D ++ L E + +S+ + K S H S F +L
Sbjct: 544 ASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQATKK--SIPLLQVQHGVSRRDFNIL 601
Query: 658 D 658
D
Sbjct: 602 D 602
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 269/529 (50%), Gaps = 29/529 (5%)
Query: 54 VRSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQD 108
VR ++EA+ + + G V+ + ++ SL+ C +++ +H +VKTG D
Sbjct: 821 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 880
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+V T LV+ YG G + AQK+F+ +P NVVSWTSL+ GY + P ++V+ M +
Sbjct: 881 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 940
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G T T ++C LE LG Q+ ++++Y ED SV NSL S++S+ S+
Sbjct: 941 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 1000
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F+ + E +++SW +I A +G + LR F M + N TL+S+ SVC +
Sbjct: 1001 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 1060
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +L+ G +H L +KLG SN+ + N+++ LY + G ++A+ +F M+ +L++WN+M
Sbjct: 1061 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 1120
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+A + Q D +G L I ++L G + TF+S L CS L + +
Sbjct: 1121 MACYVQ-------DGKCLDG----LKILAELLQMGKVMNHVTFASALAACSNPECLIESK 1169
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+HAL + GF ++VG ALV MY K G + A +V M ++W ++I G A +
Sbjct: 1170 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 1229
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACS------NAGMVYEALGYFEMMQKEYKIK 522
++A++ ++ + G+ N +T V L ACS GM A + + +K
Sbjct: 1230 EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVK 1289
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI M+ + G + + ++I + + W+ +A HG
Sbjct: 1290 N------SLITMYAKCGDLNSS-NYIFDGLGNKSPITWNAMVAANAHHG 1331
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 243/478 (50%), Gaps = 20/478 (4%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+ +HA + + F L+N+Y K GN+E A+ VFD + N SW++++SGYV+
Sbjct: 763 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTS 211
E A+ +F M G P + + +TACS S G Q+H +VVK D
Sbjct: 823 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG +L Y + G + +A K F + + NV+SWT+++ ++G + L + +M EG
Sbjct: 883 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ N+ T +++S CG + +G QV I+ G+ ++ V NS++ ++ V+EA
Sbjct: 943 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 1002
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+FD M+ ++++WNAMI+ +A H E+L F + + + T
Sbjct: 1003 YVFDHMNECDIISWNAMISAYAH-----------HGLCRESLRCFHWMRHLHNETNSTTL 1051
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
SS+L++CS + L+ G IH L +K G S+V + L+ +Y + GR E A VF M+
Sbjct: 1052 SSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 1111
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R LISW SM+ + L++ ++L G N VTF ALAACSN + E+
Sbjct: 1112 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES--- 1168
Query: 512 FEMMQKEYKIKPVMDHYM---CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+++ + D + L+ M+ +LG + EA ++ M +P+ V W+ I G
Sbjct: 1169 -KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 215/428 (50%), Gaps = 18/428 (4%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ L +L E G + ++ S L C N + L ++I+HA I+ G H V LV
Sbjct: 1132 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 1191
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+YGK G M EA+KV +P+ + V+W +LI G+ +N +P A+ + + E G +
Sbjct: 1192 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 1251
Query: 177 TLGTALTACSSLES-IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ + L ACS+ + ++ G IHA++V E D V NSL ++Y+ CG LNS+ F+
Sbjct: 1252 TMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDG 1311
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ K+ ++W ++ A +G + L+ F +M + G+ ++F+ + + + L G
Sbjct: 1312 LGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG 1371
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H L IKLG+ S+L V N+ M +Y KCG + + K+ + + ++WN +I+ A+
Sbjct: 1372 QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR- 1430
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH-ALT 414
H +A F ++ G KPD TF S+L+ C+ +++G + ++T
Sbjct: 1431 ----------HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMT 1480
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQA 473
+ G + ++++ + GR+ A EM ++W S++ H A
Sbjct: 1481 REFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA 1540
Query: 474 LQLFEDML 481
+ E +L
Sbjct: 1541 RKTAEHLL 1548
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 30/302 (9%)
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
F L S + M G +H+ I + N+++ +Y K G ++ A+ +FD
Sbjct: 749 FPLKGFSEITSQM----AGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDE 804
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M H N +W+ M++G+ ++ EA+ +F ++ G++P+ + +S++T
Sbjct: 805 MRHRNEASWSTMLSGYVRVGLY-----------EEAVGLFCQMWGLGVEPNGFMVASLIT 853
Query: 397 ICSRLVAL-EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
CSR + ++G Q+H +KTG L DV VGTALV+ Y G + A ++F EM ++
Sbjct: 854 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 913
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS---NAGMVYEALGYF 512
SWTS++ G+++ + L +++ M GV NQ TF ++C + + Y+ LG+
Sbjct: 914 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 973
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRR 569
+Y + + LI MF +EEA FD + + D + W+ I+
Sbjct: 974 ----IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI----ISWNAMISAYAH 1025
Query: 570 HG 571
HG
Sbjct: 1026 HG 1027
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
S + + G+ +HA + + L+NMY K G IE A VF EM R SW+
Sbjct: 755 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
+M++G+ L +A+ LF M GV PN + ACS +G Y A F++
Sbjct: 815 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSG--YMADEGFQVHGFV 872
Query: 519 YKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
K + D Y+ L+ + +G + A ++M + N V W+ + G GN
Sbjct: 873 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 927
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/712 (33%), Positives = 381/712 (53%), Gaps = 33/712 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT--FLVNVYGKCGNMEEAQK 130
+ S ++SL++ CV+ + L H H+++TG+ D + + F + ++E A+K
Sbjct: 29 ERSRHISLIERCVSLRQLKQT---HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLE 189
VFD +P+ N +W +LI Y P L+I FLDM+ E+ YP T + A + +
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
S+ LG+ +H VK D V NSL Y +CG L+SA K F I+EK+V+SW ++I
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ G + L F KM SE ++ + T+ + S C + +L G QV S +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD----------LA 359
NL + N+++ +Y KCG +++A++LFD M + VTW M+ G+A D +
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 360 KDDLSAHNG----------GTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGE 408
+ D+ A N EAL +F +L MK + T S L+ C+++ ALE G
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH+ K G + V +AL++MY KCG +E++ VF + R + W++MI G A H
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
++A+ +F M A V+PN VTF ACS+ G+V EA F M+ Y I P HY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G +E+A FI+ M P+ +W + C+ H N+ L A +LL+L+P
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEP 565
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
++ ++ +L +I+ G+WE+V+ ++ R L + S I I ++ F D HP
Sbjct: 566 RNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQES--FELTDEESASV----YHSEKLAIAFGLLNTPI 702
S +++ L E++EK K GY+ + S ++ +EE HSEKLAI +GL++T
Sbjct: 626 MSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 685
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V+K+ +C DCH+ K+I+ L REIIVRD R H F NG C+C DF
Sbjct: 686 PKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDF 737
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 186/400 (46%), Gaps = 52/400 (13%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQEC 84
T+K+K+ VS+ + +Q P ++L + + +E K + V +L C
Sbjct: 189 FTTIKEKD-VVSWNSMINGFVQ---KGSPDKALELFKKME--SEDVKASHVTMVGVLSAC 242
Query: 85 VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD----------- 133
++L + ++I + + + + ++++Y KCG++E+A+++FD
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 134 --------------------NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
++P+ ++V+W +LIS Y QN +P A+ VF ++ N
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Query: 174 TN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
N +TL + L+AC+ + ++ LG+ IH+Y+ K+ + V ++L +YS CG L + +
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLS 291
FN + +++V W+ +IG +G + + F KM ++PN T T++ C T L
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ H + G + I+ + + G +++A K + M + W A++
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 351 G---HAQMMDLAKD------DLSAHNGGTEAL--SIFSKL 379
HA ++LA+ +L N G L +I++KL
Sbjct: 543 ACKIHAN-LNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/698 (33%), Positives = 384/698 (55%), Gaps = 28/698 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P+ ++ +L+ C L +A +H H + G H D FV T LV+VY KC + A
Sbjct: 125 PQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAA 184
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VF +P +VV+W ++++GY + + I L +++ + P TL L +
Sbjct: 185 TVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHG 243
Query: 190 SIRLGKQIHAYVVK----YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ G+ +HAY V+ + +D VG +L +Y+ CG L A + F + +N ++W+
Sbjct: 244 ALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWS 303
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV---CGTMLSLRVGAQVHSLG 302
++G G ++ F ML++G+ + TS++S C + L +G Q+H+L
Sbjct: 304 ALVGGFVLCGRMLEAFSLFKDMLAQGL--CFLSPTSVASALRACANLSDLCLGKQLHALL 361
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
K G ++L NS++ +Y K GL+D+A LFD M + V+++A+++G+ Q
Sbjct: 362 AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQ-------- 413
Query: 363 LSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG EA +F K+ + ++PD+ T S++ CS L AL+ G+ H + G S
Sbjct: 414 ----NGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIAS 469
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ + AL++MY KCGRI+ + ++F M R ++SW +MI G+ H L +A LF DM
Sbjct: 470 ETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMK 529
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
P+ VTF+ ++ACS++G+V E +F MM +Y I P M+HY+ ++D+ R G +
Sbjct: 530 HQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFL 589
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA+ FI+ M + + +W + CR H N++LG + + +L P+ ++ +L +IF
Sbjct: 590 DEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIF 649
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AGR+++ A V+ + +E+ ++ SWI I +++F D H QS+EI++ LD ++
Sbjct: 650 SAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNIL 709
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
GY+ SF L D +E A +YHSEKLAIAFG+L I V K+ +C
Sbjct: 710 VDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCG 769
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH IK +T + R IIVRD+ R H F NG C+C DF
Sbjct: 770 DCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDF 807
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 230/494 (46%), Gaps = 34/494 (6%)
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG++ A+ +FD +P + + +LI Y P N T
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L ACS+L +R + +H + + D V +L +Y+ C S A F R+ ++V
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W ++ +G+ + ++ + PN TL ++ + +L G VH+
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAY 254
Query: 302 GIKL----GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
++ + + V +++ +Y KCG + A ++F+ M+ N VTW+A++ G
Sbjct: 255 SVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSG---MKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ EA S+F + + G + P + +S L C+ L L G+Q+HAL
Sbjct: 315 M-----------LEAFSLFKDMLAQGLCFLSPT--SVASALRACANLSDLCLGKQLHALL 361
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K+G +D+ G +L++MY K G I++A+ +F +M + +S++++++G+ + + +A
Sbjct: 362 AKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAF 421
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
++F M V+P+ T V + ACS+ A + + G+ ++ + + + + LID
Sbjct: 422 RVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICN--ALID 479
Query: 534 MFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
M+ + G I+ + FD + D V W+ IAG HG LG A L +K +
Sbjct: 480 MYAKCGRIDLSRQIFDVMPARDI----VSWNTMIAGYGIHG---LGKEATALFLDMKHQA 532
Query: 591 CESYAMLLDIFVSA 604
CE + +SA
Sbjct: 533 CEPDDVTFICLISA 546
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 241/707 (34%), Positives = 388/707 (54%), Gaps = 25/707 (3%)
Query: 59 FQEALSVLTEGPKVQTSS---YVSLLQECVNRKSLSNAEII-HAHIVKTGSHQDFFVMTF 114
F+E+LS+ + ++ + +S L +C+ S + ++ H +IVK G V
Sbjct: 398 FEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNA 457
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++ Y K + +A VF+ +PR + +SW S+ISG N AI +F+ M G
Sbjct: 458 LISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELD 517
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VTL + L AC+ G+ +H Y VK +TS+ N+L +YS C S + F
Sbjct: 518 SVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFR 577
Query: 235 RIREKNVMSWTTVIGACGENG--EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
+ +KNV+SWT +I + G + V GL +M+ +GI+P+ F +TS SL
Sbjct: 578 SMGQKNVVSWTAMITSYMRAGLFDKVAGL--LQEMVLDGIRPDVFAVTSALHAFAGDESL 635
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
+ G VH I+ G L V N++M +Y+KC V+EA+ +FD +++ ++++WN +I G+
Sbjct: 636 KQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGY 695
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
++ +N E+ S+FS + +P+ T + IL + + +LE+G +IHA
Sbjct: 696 SR-----------NNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHA 743
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L+ GFL D ALV+MY KCG + A +F ++ + LISWT MI G+ H
Sbjct: 744 YALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKH 803
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
A+ LFE M +G+ P+ +F L AC ++G+ E +F+ MQKEYKI+P + HY C++
Sbjct: 804 AIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIV 863
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
D+ R G ++EA +FI+ M EP+ IW + GCR H N++L A+++ KL+P++
Sbjct: 864 DLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTG 923
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
Y +L +I+ A RWE V +KN L E +SWI ++ KV+ F ++ HP
Sbjct: 924 YYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHPDWNR 983
Query: 653 IFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPIL 707
I + LD++ + + G+ ++ + L + A HS KLA+AFG+LN P PI
Sbjct: 984 IAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEGRPIR 1043
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
V K++ +C CH K I+ + REII+RDS R H+F G C+CR +
Sbjct: 1044 VTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/523 (26%), Positives = 246/523 (47%), Gaps = 39/523 (7%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG----------SHQDFFVMTFLV 116
++G ++ + + +S+L C + +H + VK+G D + + LV
Sbjct: 298 SQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLV 357
Query: 117 NVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+Y KCG+M A++VFD + + NV W ++ GY + + E ++ +F+ M E G P
Sbjct: 358 FMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDE 417
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ L + L R G H Y+VK +V N+L S Y+ + A+ FNR
Sbjct: 418 HAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNR 477
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++ +SW +VI C NG + + F +M ++G + + TL S+ C G
Sbjct: 478 MPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAG 537
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH--A 353
VH +K G + N+++ +Y C ++F M N+V+W AMI + A
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ D + + ++ G++PD++ +S L + +L+QG+ +H
Sbjct: 598 GLFD-------------KVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGY 644
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
T++ G + V AL+ MY KC +E A +F ++ + +ISW ++I G++ ++ +++
Sbjct: 645 TIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNES 704
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CL 531
LF DMLL RPN VT L A ++ + E+ + + D Y L
Sbjct: 705 FSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGR---EIHAYALRRGFLEDSYASNAL 760
Query: 532 IDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+DM+V+ G + A FD + K N + W++ IAG HG
Sbjct: 761 VDMYVKCGALLVARVLFDRLTK----KNLISWTIMIAGYGMHG 799
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/459 (29%), Positives = 223/459 (48%), Gaps = 30/459 (6%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI-----VKTGSHQDFFVMTFLV 116
AL +L V SY ++Q C +SL A+ HA I TG + + LV
Sbjct: 85 ALRLLGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGG-KGSVLGKRLV 143
Query: 117 NVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
Y KCG++ EA+ VFD +P +V WTSL+S Y + + A+ +F M G P
Sbjct: 144 LAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPD 203
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ L SSL S+ G+ IH + K +V N+L ++YS CG + A + F+
Sbjct: 204 AHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFD 263
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++ +SW ++IG C NG + FSKM S+G + + T+ S+ C + +
Sbjct: 264 SMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLI 323
Query: 295 GAQVHSLGIKLGYASNLRVRNS----------IMYLYLKCGLVDEAQKLFDGMSHV-NLV 343
G VH +K G L S ++++Y+KCG + A+++FD MS N+
Sbjct: 324 GKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVH 383
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
WN ++ G+A++ + E+LS+F +++ G+ PD + S +L + L
Sbjct: 384 VWNLIMGGYAKVGEF-----------EESLSLFVQMHELGIAPDEHAISCLLKCITCLSC 432
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
G H +K GF + V AL++ Y K I A VF M + ISW S+I+G
Sbjct: 433 ARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISG 492
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+++ L+ +A++LF M G + VT + L AC+ +
Sbjct: 493 CSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 150/332 (45%), Gaps = 40/332 (12%)
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM-----YLYLKCGLVDEAQKLFDG 336
+ +CG SL + H+L I+ A+ + S++ YLKCG + EA+ +FDG
Sbjct: 103 VVQLCGEERSLEAAKRAHAL-IRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDG 161
Query: 337 M--SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
M ++ W ++++ +A+ D EA+S+F ++ G+ PD + S +
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAGDF-----------QEAVSLFRQMQCCGVSPDAHAVSCV 210
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L S L +L +GE IH L K G V AL+ +Y +CGR+E A+RVF M R
Sbjct: 211 LKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDA 270
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISW SMI G ++ A+ LF M G + VT + L AC AG+ Y +G
Sbjct: 271 ISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC--AGLGYGLIG---K 325
Query: 515 MQKEYKIKP----VMDHYMCLID----------MFVRLGCIEEAFDFIKKMDFEPNEVIW 560
Y +K +D ID M+V+ G + A M + N +W
Sbjct: 326 AVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVW 385
Query: 561 SVFIAGCRRHGNME--LGFYAAEQLLKLKPKD 590
++ + G + G E L + L + P +
Sbjct: 386 NLIMGGYAKVGEFEESLSLFVQMHELGIAPDE 417
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 231/686 (33%), Positives = 386/686 (56%), Gaps = 20/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+++ +L V SL+ + +H +K G V L+N+Y K A+ VFDN+
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLG 194
+++SW S+I+G QN A+ +F+ +L G P T+ + L A SSL E + L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+H + +K D+ V +L YS + A F R ++++W ++ ++
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + L+ F+ M +G + ++FTL ++ CG + ++ G QVH+ IK GY +L V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ I+ +Y+KCG + AQ FD + + V W MI+G + NG E A
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE------------NGEEERAF 603
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+FS++ G+ PD +T +++ S L ALEQG QIHA LK +D VGT+LV+MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A +F + + +W +M+ G A H + LQLF+ M G++P++VTF+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+V EA + M +Y IKP ++HY CL D R G +++A + I+ M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
E + ++ +A CR G+ E G A +LL+L+P D +Y +L +++ +A +W+++ +
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ + + K+ + +SWI +K+K++ F +D + Q+ I++ + +++ K GY +
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET 903
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D +E A YHSEKLA+AFGLL+TP +PI V+K+ +C DCHN +K I +
Sbjct: 904 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKV 963
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI++RD+ R H+F +G C+C D+
Sbjct: 964 YNREIVLRDANRFHRFKDGICSCGDY 989
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 227/447 (50%), Gaps = 21/447 (4%)
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
+S Y+ + Q + F DM+E+ VT L ++S+ LG+Q+H +K
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ +V NSL ++Y A F+ + E++++SW +VI +NG V+ + F +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 267 MLSEGIQPNEFTLTSISSVCGTML-SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+L G++P+++T+TS+ ++ L + QVH IK+ S+ V +++ Y +
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+ EA+ LF+ + +LV WNAM+AG+ Q D G + L +F+ ++ G +
Sbjct: 467 CMKEAEILFE-RHNFDLVAWNAMMAGYTQSHD-----------GHKTLKLFALMHKQGER 514
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
D +T +++ C L A+ QG+Q+HA +K+G+ D+ V + +++MY KCG + A
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + ++WT+MI+G + +A +F M L GV P++ T + LA S+
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT-IATLAKASSCLTA 633
Query: 506 YEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E ++ K+ D ++ L+DM+ + G I++A+ K+++ N W+
Sbjct: 634 LEQGR--QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAM 690
Query: 564 IAGCRRHGNME--LGFYAAEQLLKLKP 588
+ G +HG + L + + L +KP
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKP 717
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 219/501 (43%), Gaps = 62/501 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ L+ + L + HA I+ + + F++ L+++Y KCG++ A++VFD +P
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 137 RINVVSWTSLISGYVQNSQ-----PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
++VSW S+++ Y Q+S+ + A +F + + Y + +TL L C +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ H Y K + D V +L ++Y G + F + ++V+ W ++ A
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL--GIKLGYAS 309
E G + + S S G+ PNE TL ++ + G QV S G S
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVS 278
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ RN + YL H+G
Sbjct: 279 EIIFRNKGLSEYL-------------------------------------------HSGQ 295
Query: 370 TEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
A L F+ + S ++ D TF +L ++ +L G+Q+H + LK G + V +
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+NMY K + A VF MS R LISW S+I G A + L +A+ LF +L G++P+
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQ-KEYKIKPVMDHYM--CLIDMFVRLGCIEEAF 545
Q T L A S+ + E L + + KI V D ++ LID + R C++EA
Sbjct: 416 QYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 546 DFIKKMDFEPNEVIWSVFIAG 566
++ +F+ V W+ +AG
Sbjct: 473 ILFERHNFDL--VAWNAMMAG 491
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 144/272 (52%), Gaps = 1/272 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + + ++ + C +++ + +HA+ +K+G D +V + ++++Y KCG+M
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ FD++P + V+WT++ISG ++N + E A HVF M G P T+ T A S
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L ++ G+QIHA +K +D VG SL +Y+ CGS++ A F RI N+ +W +
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLG 306
+ ++GE + L+ F +M S GI+P++ T + S C + L + S+ G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ + + + GLV +A+ L + MS
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/694 (34%), Positives = 390/694 (56%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ S+L ++ ++ +HA VK G FV L+N+Y KCG +EE
Sbjct: 195 EGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEE 254
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + ++VSW +L++G + N A+ +F D + + T T + C++
Sbjct: 255 AKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCAN 314
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTT 246
L+ + L +Q+H+ V+K+ D +V ++ YS CG L+ A F + +NV+SWT
Sbjct: 315 LKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTA 374
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG C +N + FS+M + ++PNEFT +++ + +L ++ AQ+ IK
Sbjct: 375 MIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQI----IKTN 430
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V +++ Y K G +EA +F + H ++V W+AM++ ++Q D
Sbjct: 431 YQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDC-------- 482
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
+G T ++F K++ GMKP+ +T SS + C+ A ++QG Q HA+++K + + V
Sbjct: 483 DGAT---NVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICV 539
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
G+ALV MY + G I+ A VF + R L+SW SMI+G+A H S +AL F M G+
Sbjct: 540 GSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ TF+ + C++AG+V E YF+ M ++ I P M+HY C++D++ R G ++E
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETM 659
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ I+ M F ++W + CR H N+ELG AA++LL L+P D +Y +L +I+ +AG
Sbjct: 660 NLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAG 719
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
RW++ V+ L +K+ + SWI+IK+KV+SF D HP S +I+ L + + K
Sbjct: 720 RWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLK 779
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY S L D +E+ V HSE+LA+AFGL+ TP +P+ +VK+ +C DCH
Sbjct: 780 QEGYCPNTSVVLHDIAEEQKETMLVMHSERLALAFGLIATPPRTPLQIVKNLRVCGDCHM 839
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+++ + REII+RD R H F G C+C DF
Sbjct: 840 VMKMVSLIEDREIIMRDCSRFHHFNAGACSCGDF 873
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 260/503 (51%), Gaps = 18/503 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQ 129
+VQ ++ +L+ C + E +H VK G + V T LV++Y KCG +E+ +
Sbjct: 96 RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGR 155
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VF+ +P+ NVV+WTSL++GYVQ + +F M G +P T + L+A +S
Sbjct: 156 VVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQG 215
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ LG+++HA VK+ V NSL ++YS CG + A F ++ ++++SW T++
Sbjct: 216 AVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMA 275
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
N ++ L+ F + + ++ T +++ +C + L + Q+HS +K G+ S
Sbjct: 276 GLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHS 335
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V +IM Y KCG +D+A +F M N+V+W AMI G Q D+
Sbjct: 336 DGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPL-------- 387
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
A ++FS++ +KP+ +T+S++LT ++ QIHA +KT + VGTA
Sbjct: 388 ---AAALFSRMREDNVKPNEFTYSTVLTASIPILL----PQIHAQIIKTNYQHAPSVGTA 440
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+ Y K G E A +F + + +++W++M++ ++ A +F M + G++PN
Sbjct: 441 LLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPN 500
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+ T A+ AC++ + F + +Y+ + + L+ M+ R G I+ A +
Sbjct: 501 EFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSA-RIV 559
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
+ + + V W+ I+G +HG
Sbjct: 560 FERQTDRDLVSWNSMISGYAQHG 582
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/597 (36%), Positives = 353/597 (59%), Gaps = 19/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD++ G+ P L C+ L ++ G+ IHA++ EDD + N + ++Y+
Sbjct: 93 LDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAK 152
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGSL A F+++ K+++SWT +I ++G+A + L F KML G QPNEFTL+S+
Sbjct: 153 CGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSL 212
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
GT S G Q+H+ +K GY N+ V +S++ +Y + + EA+ +F+ ++ N+
Sbjct: 213 LKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNV 272
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+IAGHA+ + G + +F ++ G +P +T+SS+L C+
Sbjct: 273 VSWNALIAGHARKGE-----------GEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSG 320
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+LEQG+ +HA +K+G +G L++MY K G I+ A +VF + + ++SW S+I+
Sbjct: 321 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIIS 380
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G+A H L +ALQLFE ML A V+PN++TF+ L ACS++G++ E YFE+M+K +KI+
Sbjct: 381 GYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKK-HKIE 439
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
+ H++ ++D+ R G + EA FI++M +P +W + CR H NM+LG YAAEQ
Sbjct: 440 AQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQ 499
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D + +L +I+ SAGR D A V+ + +E + + SW+ I+++V+ F
Sbjct: 500 IFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVA 559
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGL 697
ND HP EI ++ +++ K K GY S L D E YHSEKLA+AF +
Sbjct: 560 NDDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAV 619
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L TP I + K+ +C DCH+ K + + REIIVRD+ R H F++G C+CRD+
Sbjct: 620 LKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDY 676
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 208/386 (53%), Gaps = 13/386 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y +L +C + L IHAHI + D ++ F++N+Y KCG++EEAQ +FD +P
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++VSWT LISGY Q+ Q A+ +F ML G P TL + L A + S G+Q
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQ 227
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+HA+ +KY + + VG+SL +Y+ + A FN + KNV+SW +I GE
Sbjct: 228 LHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGE 287
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+R F +ML +G +P FT +S+ + C + SL G VH+ IK G + N+
Sbjct: 288 GEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNT 346
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G + +A+K+F + ++V+WN++I+G+AQ H G EAL +F
Sbjct: 347 LIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQ-----------HGLGAEALQLF 395
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ + ++P+ TF S+LT CS L++G+ L K + V +V++ +
Sbjct: 396 EQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRA 455
Query: 437 GRIERASRVFVEMSTR-TLISWTSMI 461
GR+ A++ EM + T W +++
Sbjct: 456 GRLNEANKFIEEMPIKPTAAVWGALL 481
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 117/249 (46%), Gaps = 9/249 (3%)
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L + +N ++P+ +S +L C+ L L+QG IHA + F D+V+ ++NM
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG +E A +F +M T+ ++SWT +I+G++ + +AL LF ML G +PN+ T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
L A S G +Y + L+DM+ R + EA +
Sbjct: 210 SSLLKA-SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDIFVSA----GR 606
+ N V W+ IAG R G E Q+L+ +P +Y+ +L S G+
Sbjct: 269 AK-NVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHF-TYSSVLACASSGSLEQGK 326
Query: 607 WEDVAVVKN 615
W V+K+
Sbjct: 327 WVHAHVIKS 335
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/591 (37%), Positives = 344/591 (58%), Gaps = 19/591 (3%)
Query: 164 LDMLEAGNYPTNVTLGTAL-TACSSLESIRLGKQIHAYVVKYQTEDDTSV-GNSLCSLYS 221
LD+++ G+ + L + L C+ L + G+ +HA++V D+ V N + ++Y+
Sbjct: 75 LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
CG L+ A + F+ + K++++WT +I +N L F +ML G QPN FTL+S
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSS 194
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ G+ L G Q+H+ +K GY S++ V ++++ +Y +CG +D AQ FDGM +
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WNA+I+GHA+ + G AL + K+ +P +T+SS+L+ C+ +
Sbjct: 255 EVSWNALISGHARKGE-----------GEHALHLLWKMQRKNFQPTHFTYSSVLSACASI 303
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
ALEQG+ +HA +K+G +G L++MY K G I+ A RVF + ++SW +M+
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
TG A H L + L FE ML G+ PN+++F+ L ACS++G++ E L YFE+M+K YK+
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKV 422
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
+P + HY+ +D+ R+G ++ A FI++M EP +W + CR H NMELG YAAE
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAE 482
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
+ +L P D +L +I+ SAGRW DVA V+ + +E + + SW+ I++ V+ F
Sbjct: 483 RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFV 542
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFG 696
ND HP+ EI +E+ K K GY S L + E YHSEKLA+AF
Sbjct: 543 ANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFA 602
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
LLNTP SPI + K+ +C DCH IK ++ + REIIVRD+ R H+F +G
Sbjct: 603 LLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 212/403 (52%), Gaps = 14/403 (3%)
Query: 62 ALSVLTEGPKVQTSS-YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVY 119
AL ++ G V + Y LL+EC + I+HAH+V + + V+ +VN+Y
Sbjct: 74 ALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMY 133
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
KCG +++A+++FD +P ++V+WT+LI+G+ QN++P A+ +F ML G P + TL
Sbjct: 134 AKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLS 193
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L A S + G Q+HA+ +KY + VG++L +Y+ CG +++A AF+ + K
Sbjct: 194 SLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +SW +I GE L KM + QP FT +S+ S C ++ +L G VH
Sbjct: 254 SEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVH 313
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK G + N+++ +Y K G +D+A+++FD + ++V+WN M+ G AQ
Sbjct: 314 AHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ----- 368
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
H G E L F ++ G++P+ +F +LT CS L++G L K
Sbjct: 369 ------HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKV 422
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMI 461
DV V++ + G ++RA R EM T W +++
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 41/302 (13%)
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD- 422
S +GGT L + + PD +S +L C+RL +EQG +HA + + FL +
Sbjct: 64 SQSDGGT-GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+V+ +VNMY KCG ++ A R+F EM T+ +++WT++I GF+ ++ AL LF ML
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 483 AGVRPNQVTFVGAL-AACSNAGM---------------------------VYEALGYFEM 514
G +PN T L A+ S G+ +Y G+ +
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 515 MQKEYKIKPVMDH--YMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRR 569
Q + P + LI R G E A + KM +F+P +S ++ C
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACAS 302
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYA-MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
G +E G + ++K K LLD++ AG +D V ++L + D
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVF-----DRLVKPDVV 357
Query: 629 SW 630
SW
Sbjct: 358 SW 359
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 381/670 (56%), Gaps = 27/670 (4%)
Query: 95 IIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
++ ++KTG D V L++++ + G++ AQ+VFD L V WT LI+ YVQ
Sbjct: 165 VVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA 224
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+ +FL ML+ G P ++ + ++AC+ L S+RLG+Q+H+ ++ D+ V
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284
Query: 214 NSLCSLYSTCG---SLNSAIKAFNRIREKNVMSWTTVIGACGENG-EAVQGLRFFSKMLS 269
L +Y+ S+ A K F + NVMSWT +I ++G + + F +ML+
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
E I+PN T +++ C + G Q+H+ +K A V N+++ +Y + G ++E
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE 404
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A+K FD + N+++ ++ D + N S SK+ +
Sbjct: 405 ARKAFDQLYETNILS-------------MSPDVETERNNA----SCSSKIEGMDDGVSTF 447
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF+S+L+ + + L +G+++HAL++K GF SD + +LV+MY +CG +E A R F EM
Sbjct: 448 TFASLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEM 507
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ISWTS+I+G A H + QAL +F DM+LAGV+PN VT++ L+ACS+ G+V E
Sbjct: 508 KDHNVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGK 567
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+F MQK++ + P M+HY C++D+ R G +EEA FI +M + + ++W ++ CR
Sbjct: 568 EHFRSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRT 627
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+GN E+G AA ++ L+P+D Y +L +++ AG W++VA +++L R++ LS+ S
Sbjct: 628 YGNTEIGEIAANHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLS 687
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESAS 684
W+ + + ++ F+ D HP + +I+ L L+ + K GY S L D +E
Sbjct: 688 WMDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYL 747
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
+ HSEK+A+AFGL+ T P+ + K+ +C DCH+ IK I+ T REII+RDS R H+
Sbjct: 748 LQHSEKIAVAFGLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRM 807
Query: 745 VNGHCTCRDF 754
+G C+C ++
Sbjct: 808 KDGICSCGEY 817
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 141/504 (27%), Positives = 260/504 (51%), Gaps = 38/504 (7%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDM 166
D V L+ +Y KCG +E A++VFD + + ++VSWT++ S +N ++ + +M
Sbjct: 75 DAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEM 134
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRL-GKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCG 224
LE G P TL A AC E RL G + +V+K D SVG +L +++ G
Sbjct: 135 LELGLRPNAFTLCAAARACFPQELFRLAGGVVLGFVLKTGFWGTDVSVGCALIDMFARNG 194
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L +A + F+ + E+ + WT +I + G A + + F ML +G +P+ ++++S+ S
Sbjct: 195 DLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPDGYSMSSMIS 254
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL---VDEAQKLFDGMSHVN 341
C + S+R+G Q+HS+ ++LG S+ V ++ +Y K + ++ A+K+F M N
Sbjct: 255 ACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHN 314
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFSSILTICS 399
+++W A+I+G+ Q +G E +++F ++ + ++P+ T+S++L C+
Sbjct: 315 VMSWTALISGYVQ------------SGVQENNVMALFREMLNESIRPNHITYSNLLKACA 362
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L + G QIHA LKT VVG ALV+MY + G +E A + F ++ ++S +
Sbjct: 363 NLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSP 422
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM-MQKE 518
+ N++ ++ +D GV + TF L+A ++ G++ + + M+
Sbjct: 423 DVETERNNASCSSKIEGMDD----GV--STFTFASLLSAAASVGLLTKGQKLHALSMKAG 476
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHG--NM 573
++ + + L+ M+ R G +E+ AFD +K + N + W+ I+G +HG
Sbjct: 477 FRSDQGISN--SLVSMYARCGYLEDACRAFDEMK----DHNVISWTSIISGLAKHGYAKQ 530
Query: 574 ELGFYAAEQLLKLKPKDCESYAML 597
L + L +KP D A+L
Sbjct: 531 ALSMFHDMILAGVKPNDVTYIAVL 554
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 200/392 (51%), Gaps = 39/392 (9%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRI-REK 239
LT+ + +RLG+ +H +++ + D D V NSL ++YS CG++ +A + F+++ +
Sbjct: 47 LTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVR 106
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV-GAQV 298
+++SWT + NG + LR +ML G++PN FTL + + C R+ G V
Sbjct: 107 DLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGVV 166
Query: 299 HSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+K G+ +++ V +++ ++ + G + AQ++FDG+ V W +I + Q
Sbjct: 167 LGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQA-- 224
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
++ + +F + G +PD Y+ SS+++ C+ L ++ G+Q+H++ L+
Sbjct: 225 ---------GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRL 275
Query: 418 GFLSDVVVGTALVNMYKKCG---RIERASRVFVEMSTRTLISWTSMITGFANHSLS-HQA 473
G +SD V LV+MY K +E A +VF M ++SWT++I+G+ + +
Sbjct: 276 GLVSDSCVSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNV 335
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ LF +ML +RPN +T+ L AC+N +G A + +K + H
Sbjct: 336 MALFREMLNESIRPNHITYSNLLKACANLSDQDSGRQIHA----------HVLKTSIAHV 385
Query: 529 ----MCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
L+ M+ GC+EEA ++ +E N
Sbjct: 386 NVVGNALVSMYAESGCMEEARKAFDQL-YETN 416
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEM- 449
+ +LT +R L G +H L++ L +D VV +L+ MY KCG +E A RVF +M
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R L+SWT+M + A + ++L+L +ML G+RPN T A AC + A
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163
Query: 510 GYFEMMQKEYKIKPVMDHYMC-LIDMFVRLG---CIEEAFDFIKKMDFEPNEVIWSVFI- 564
G + C LIDMF R G + FD + E V+W++ I
Sbjct: 164 GVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGL----IERTSVVWTLLIT 219
Query: 565 ----AGC 567
AGC
Sbjct: 220 RYVQAGC 226
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/686 (34%), Positives = 391/686 (56%), Gaps = 22/686 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+ + + KSL+ +H +++K+G F L++ Y KCG++ EA+K+FD LP
Sbjct: 4 YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFLGHK-LIDGYIKCGSLAEARKLFDELP 62
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++V+W S+IS ++ + + + A+ + +ML G P T A S L IR G++
Sbjct: 63 SRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQR 122
Query: 197 IHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
H V E D V ++L +Y+ + A F R+ EK+V+ +T +I ++G
Sbjct: 123 AHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHG 182
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L+ F M++ G++PNE+TL I CG + L G +H L +K G S + +
Sbjct: 183 LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQT 242
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALS 374
S++ +Y +C +++++ K+F+ + + N VTW + + G Q NG E A+S
Sbjct: 243 SLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQ------------NGREEVAVS 290
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF ++ + P+ +T SSIL CS L LE GEQIHA+T+K G + G AL+N+Y
Sbjct: 291 IFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYG 350
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG +++A VF ++ +++ SMI +A + H+AL+LFE + G+ PN VTF+
Sbjct: 351 KCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFIS 410
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC+NAG+V E F ++ + I+ +DH+ C+ID+ R +EEA I+++
Sbjct: 411 ILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-N 469
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ V+W + C+ HG +E+ ++L+L P D ++ +L +++ SAG+W V +K
Sbjct: 470 PDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMK 529
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ R+ KL ++ SW+ + +V++F D HP+S EIF++L L++K K GY
Sbjct: 530 STIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTR 589
Query: 675 FELT--DEE---SASVYHSEKLAIAFGLLNT-PIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L DEE S+ YHSEKLAIA+ L T + I + K+ +C DCH++IK ++ L
Sbjct: 590 FVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLL 649
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T R+II RDSKR H F G C+C+D+
Sbjct: 650 TGRDIIARDSKRFHHFKGGLCSCKDY 675
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 164/327 (50%), Gaps = 15/327 (4%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + + G K + +L C N L N ++IH +VK+G T L+
Sbjct: 186 EALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLL 245
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y +C +E++ KVF+ L N V+WTS + G VQN + E+A+ +F +M+ P
Sbjct: 246 TMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPF 305
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL + L ACSSL + +G+QIHA +K + + G +L +LY CG+++ A F+ +
Sbjct: 306 TLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVL 365
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E +V++ ++I A +NG + L F ++ + G+ PN T SI C + G
Sbjct: 366 TELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGC 425
Query: 297 QVHSLGIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM-----I 349
Q+ + I+ + L + + ++ L + ++EA L + + + ++V W + I
Sbjct: 426 QIFA-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKI 484
Query: 350 AGHAQMMDLAKD---DLSAHNGGTEAL 373
G +M + +L+ +GGT L
Sbjct: 485 HGEVEMAEKVMSKILELAPGDGGTHIL 511
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/686 (34%), Positives = 386/686 (56%), Gaps = 19/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++V +L L + IH +V++G Q V L+N+Y K G++ A+ VF +
Sbjct: 908 TFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQM 967
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES-IRLG 194
+++VSW ++ISG + E ++ +F+D+L G P T+ + L ACSSL L
Sbjct: 968 NEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLA 1027
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
QIHA +K D+ V +L +YS G + A F ++ SW ++ +
Sbjct: 1028 TQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVS 1087
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + LR + M G + N+ TL + + G ++ L+ G Q+ ++ +K G+ +L V
Sbjct: 1088 GDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVI 1147
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ ++ +YLKCG ++ A+++F+ + + V W MI+G + NG E AL
Sbjct: 1148 SGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVE------------NGQEEHAL 1195
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ + S ++PD YTF++++ CS L ALEQG QIHA T+K D V T+LV+MY
Sbjct: 1196 FTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMY 1255
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE A +F +T + SW +MI G A H + +ALQ FE+M GV P++VTF+
Sbjct: 1256 AKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFI 1315
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+V EA F MQK Y I+P ++HY CL+D R G I EA I M F
Sbjct: 1316 GVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPF 1375
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
E + ++ + CR + E G AE+LL L+P D +Y +L +++ +A +WE+VA
Sbjct: 1376 EASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASA 1435
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+N+ R+ + + +SW+ +K+KV+ F D H ++ I+ ++ ++++ + GY
Sbjct: 1436 RNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYLPDT 1495
Query: 674 SFELT-----DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D+E + YHSEKLAIA+GL+ TP + + V+K+ +C DCHN IK I+ +
Sbjct: 1496 DFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHNAIKYISKV 1555
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
RE+++RD+ R H F +G C+C D+
Sbjct: 1556 FEREVVLRDANRFHHFRSGVCSCGDY 1581
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 232/488 (47%), Gaps = 53/488 (10%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ S+L+ + L + HA I+ +G H D F+ L+ +Y KCG++ A+K+FD P
Sbjct: 629 WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688
Query: 137 RI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
++V+W +++S + ++ H+F + + T TL C S
Sbjct: 689 DTSRDLVTWNAILSAHADKARD--GFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ +H Y VK + D V +L ++Y+ G + A F+ + ++V+ W ++ A +
Sbjct: 747 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT 806
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT---MLSLRVGAQVHSLGIKLGYASNL 311
G + L FS+ G++P++ TL +++ V + +L ++ Q+ + G KL
Sbjct: 807 GLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEWQL-KQLKAYGTKL------ 859
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT- 370
MY G +++ WN ++ Q G T
Sbjct: 860 -----FMYDDDDDG--------------SDVIAWNKTLSWFLQ------------RGETW 888
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA+ F + +S + D TF +L++ + L LE G+QIH + +++G V VG L+
Sbjct: 889 EAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLI 948
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
NMY K G + RA VF +M+ L+SW +MI+G A L ++ +F D+L G+ P+Q
Sbjct: 949 NMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQF 1008
Query: 491 TFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA-FD 546
T L ACS+ G + A ++ K V+D ++ LID++ + G +EEA F
Sbjct: 1009 TVASVLRACSSLGGGCHLAT---QIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFL 1065
Query: 547 FIKKMDFE 554
F+ + F+
Sbjct: 1066 FVNQDGFD 1073
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/708 (33%), Positives = 391/708 (55%), Gaps = 30/708 (4%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EALS+ G + T ++VS LQ C + IHA I+K+ D +V L+
Sbjct: 234 EALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALI 293
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y CG ME+A++VF ++ + VSW +L+SG VQN AI+ F DM ++G P V
Sbjct: 294 AMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQV 353
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
++ + A ++ G ++HAY +K+ + + +GNSL +Y C + AF +
Sbjct: 354 SVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYM 413
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EK+++SWTT+I +N + L K+ E + + + SI C + S ++
Sbjct: 414 PEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIK 473
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H +K G A ++ ++N+I+ +Y + LVD A+ +F+ ++ ++V+W +MI
Sbjct: 474 EIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMIT------ 526
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG EAL +F+ L + ++PDL T S+L + L +L++G++IH +
Sbjct: 527 ------CCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLI 580
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF + ++ +LV+MY +CG +E A +F + R LI WTSMI H A+
Sbjct: 581 RKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAID 640
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF M V P+ +TF+ L ACS++G+V E +FE+M+ EYK++P +HY CL+D+
Sbjct: 641 LFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLL 700
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R +EEA+ F++ M EP+ +W + CR H N +LG AA++LL+L ++ +Y
Sbjct: 701 ARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYV 760
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ + F + GRW DV V+++ + KL + SWI +++K+++F D HPQ I+
Sbjct: 761 LVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYL 820
Query: 656 VLDE----LVEKAKCFGYKQQESFELTD----EESASVY-HSEKLAIAFGLLNTPIVSPI 706
L + L EK GY+ Q D E++ +Y HSE+LA+ +GLL T + +
Sbjct: 821 KLAQFTKLLKEKG---GYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCL 877
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ K+ +C DCH F KI + ++ R ++VRD+ R H F G C+C DF
Sbjct: 878 RITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDF 925
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 149/525 (28%), Positives = 268/525 (51%), Gaps = 32/525 (6%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ EA+ + E G + ++ +L+ C K IH VK G FV
Sbjct: 129 YVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNA 188
Query: 115 LVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+ +Y KCG++ A+ +FD+ + + + VSW S+IS +V + A+ +F M E G
Sbjct: 189 LIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVE 248
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
T +AL AC I++G+ IHA ++K D V N+L ++Y+ CG + A +
Sbjct: 249 SNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERV 308
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F + K+ +SW T++ +N + F M G +P++ ++ ++ + G +L
Sbjct: 309 FKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANL 368
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G +VH+ IK G SN+ + NS++ +Y KC V F+ M +L++W +IAG+
Sbjct: 369 LAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGY 428
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
AQ + +AL++ K+ M D SIL CS L + + ++IH
Sbjct: 429 AQ-----------NECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHG 477
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
LK G L+D+++ A+VN+Y + ++ A VF ++++ ++SWTSMIT ++ L+ +
Sbjct: 478 YVLKGG-LADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIE 536
Query: 473 ALQLFEDMLLAGVRPNQVTFVGAL---AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
AL+LF ++ + P+ +T V L AA S+ E G+ +++K + ++ ++ +
Sbjct: 537 ALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGF--LIRKGFFLEGLIAN-- 592
Query: 530 CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
L+DM+ R G +E A F+++K+ D ++W+ I HG
Sbjct: 593 SLVDMYARCGTMENARNIFNYVKQRDL----ILWTSMINANGMHG 633
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 209/417 (50%), Gaps = 31/417 (7%)
Query: 161 HVFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCS 218
H F D L +P AL C+S +++ G+Q+HA+ +K Q D +
Sbjct: 31 HFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVH 90
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y CGS A+K F+++ E+ + +W +IGAC G V+ + + +M G+ + FT
Sbjct: 91 MYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFT 150
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG-- 336
+ CG R+G ++H + +K GY + V N+++ +Y KCG + A+ LFD
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M + V+WN++I+ H EALS+F ++ G++ + YTF S L
Sbjct: 211 MEKDDPVSWNSIISAHV-----------GEGESLEALSLFRRMQEVGVESNTYTFVSALQ 259
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C ++ G IHA+ LK+ +DV V AL+ MY CG++E A RVF M + +S
Sbjct: 260 ACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVS 319
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W ++++G + + A+ F+DM +G +P+QV+ + +AA + + M
Sbjct: 320 WNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAG-----MEV 374
Query: 517 KEYKIKPVMDHYM----CLIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAG 566
Y IK +D M LIDM+ + C++ AF+++ + D + W+ IAG
Sbjct: 375 HAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDL----ISWTTIIAG 427
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/459 (28%), Positives = 234/459 (50%), Gaps = 19/459 (4%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVN 117
F + L T P Q +Y L+ C + K+L + +HAH +KT ++ D F+ T V+
Sbjct: 33 FTDPLPTTTRFPLQQ--AYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVH 90
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKCG+ +A KVFD + + +W ++I V + AI ++ +M G T
Sbjct: 91 MYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFT 150
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR-- 235
L AC + + RLG +IH VK V N+L ++Y+ CG L A F+
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ + + +SW ++I A GE+++ L F +M G++ N +T S C +++G
Sbjct: 211 MEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG 270
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+H++ +K + +++ V N+++ +Y CG +++A+++F M + V+WN +++G Q
Sbjct: 271 RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQ- 329
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+D+ ++A++ F + SG KPD + +++ R L G ++HA +
Sbjct: 330 -----NDMY-----SDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAI 379
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K G S++ +G +L++MY KC ++ F M + LISWT++I G+A + AL
Sbjct: 380 KHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALN 439
Query: 476 LFEDMLLAGVRPNQVTFVGALAACS---NAGMVYEALGY 511
L + L + + + L ACS + ++ E GY
Sbjct: 440 LLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGY 478
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/666 (33%), Positives = 383/666 (57%), Gaps = 27/666 (4%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F ++ Y K ++ A + F+++ +VVSW +I+ Q+ + A+ + ++M
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G + T ++LTAC+ L S+ GKQ+HA V++ + D V ++L LY+ CGS A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ FN ++++N +SWT +IG + + + F++M +E + ++F L ++ S C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+ L +G Q+HSL +K G+ + V NS++ LY KCG + A+ +F MS ++V+W +MI
Sbjct: 385 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 444
Query: 350 AGHAQMMDLAK-----DDLSAHNGGT---------------EALSIFSK-LNSSGMKPDL 388
++Q+ ++ K D + N T + L ++S L+ + PD
Sbjct: 445 TAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 504
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T+ ++ C+ + A + G+QI T+K G + +V V A + MY KCGRI A ++F
Sbjct: 505 VTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDL 564
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
++ + ++SW +MITG++ H + QA + F+DML G +P+ +++V L+ CS++G+V E
Sbjct: 565 LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG 624
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
YF+MM + + I P ++H+ C++D+ R G + EA D I KM +P +W ++ C+
Sbjct: 625 KLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 684
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
HGN EL AA+ + +L D SY +L I+ AG+ +D A V+ L R++ + + +
Sbjct: 685 IHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGY 744
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYHS 688
SW+ +++KV+ FK +D HPQ I LDEL+EK GY + ES + ++HS
Sbjct: 745 SWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYVRTES------PRSEIHHS 798
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLA+AFG+++ P PI ++K+ +C DCH IK+I+S+T RE ++RD R H F +G
Sbjct: 799 EKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGS 858
Query: 749 CTCRDF 754
C+C D+
Sbjct: 859 CSCGDY 864
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 142/599 (23%), Positives = 256/599 (42%), Gaps = 119/599 (19%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG---------- 123
T + L+ C +R +L+ A +H +V G F+ L++ Y CG
Sbjct: 4 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLR 63
Query: 124 ----------------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
++ +A+++FD +PR +V SW +L+SGY Q + +
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLE 123
Query: 162 VFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
F+ M +G+ P T + +C +L L Q+ K+ D V +L ++
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMF 183
Query: 221 STCG-------------------------------SLNSAIKAFNRIREKNVMSWTTVIG 249
CG ++ AI+ F + E++V+SW +I
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A ++G + L +M +G++ + T TS + C + SL G Q+H+ I+
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQI 303
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V ++++ LY KCG EA+++F+ + N V+W +I G Q +K
Sbjct: 304 DPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK--------- 354
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
++ +F+++ + M D + +++++ C + L G Q+H+L LK+G +VV +L
Sbjct: 355 --SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA------------------------ 465
+++Y KCG ++ A VF MS R ++SWTSMIT ++
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWN 472
Query: 466 -------NHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
H L+++ ML V P+ VT+V C++ G LG +++
Sbjct: 473 AMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA--NKLGD-QIIGH 529
Query: 518 EYKIKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
K +++ + I M+ + G I EA FD + D V W+ I G +HG
Sbjct: 530 TVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV----VSWNAMITGYSQHG 584
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 220/446 (49%), Gaps = 49/446 (10%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ E G ++ +++Y S L C SL + +HA ++++ D +V + L
Sbjct: 252 REALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 311
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG+ +EA++VF++L N VSWT LI G +Q ++ +F M
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C + + LG+Q+H+ +K V NSL SLY+ CG L +A F+
Sbjct: 372 FALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSS 431
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ E++++SWT++I GA ++G GL+ +
Sbjct: 432 MSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMY 491
Query: 265 SKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
S MLS+ + P+ T ++ C + + ++G Q+ +K G N+ V N+ + +Y K
Sbjct: 492 SAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 551
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EAQKLFD ++ ++V+WNAMI G++Q H G +A F + S G
Sbjct: 552 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQ-----------HGMGKQAAKTFDDMLSKG 600
Query: 384 MKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
KPD ++ ++L+ CS +++G+ +T G + + +V++ + G + A
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 443 SRVFVEMSTR-TLISWTSMITGFANH 467
+ +M + T W ++++ H
Sbjct: 661 KDLIDKMPMKPTAEVWGALLSACKIH 686
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 215/473 (45%), Gaps = 33/473 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL A +C +L R + + A + E + N + + Y+ GSL+ A + F+R+
Sbjct: 44 TLLHAYFSCGALSDAR--RLLRADI----KEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTSISSVCGTMLSLRVG 295
++V SW T++ + + GL F M G PN FT + CG + +
Sbjct: 98 PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+ L K + + V +++ ++++CG VD A +LF + + N+M+AG+A++
Sbjct: 158 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 217
Query: 356 M----------DLAKDD----------LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
D+A+ D LS EAL + +++ G++ D T++S L
Sbjct: 218 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 277
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
T C+RL +L G+Q+HA +++ D V +AL+ +Y KCG + A RVF + R +
Sbjct: 278 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 337
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWT +I G + ++++LF M + +Q ++ C N + +
Sbjct: 338 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
K + ++ LI ++ + G ++ A +F+ E + V W+ I + GN+
Sbjct: 398 LKSGHNRAIVVSN-SLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI-- 453
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
A E + ++ ++ +L ++ G ED + + +K T DW
Sbjct: 454 -IKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK-DVTPDW 504
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 160/327 (48%), Gaps = 20/327 (6%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V ++S +SL +C + L NAE + + + S +D T ++ Y + GN+ +A++
Sbjct: 407 VVSNSLISLYAKCGD---LQNAEFVFSSM----SERDIVSWTSMITAYSQIGNIIKAREF 459
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLES 190
FD + N ++W +++ Y+Q+ E + ++ ML + P VT T C+ + +
Sbjct: 460 FDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGA 519
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+LG QI + VK + SV N+ ++YS CG ++ A K F+ + K+V+SW +I
Sbjct: 520 NKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITG 579
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL-GYAS 309
++G Q + F MLS+G +P+ + ++ S C ++ G + ++ G +
Sbjct: 580 YSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISP 639
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAM-----IAGHAQMMDLAKD-- 361
L + ++ L + G + EA+ L D M W A+ I G+ ++ +LA
Sbjct: 640 GLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHV 699
Query: 362 -DLSAHNGGTEALSIFSKLNSSGMKPD 387
+L + + G+ L +K+ S K D
Sbjct: 700 FELDSPDSGSYML--LAKIYSDAGKSD 724
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 248/734 (33%), Positives = 408/734 (55%), Gaps = 34/734 (4%)
Query: 54 VRSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQD 108
VR ++EA+ + + G V+ + ++ SL+ C +++ +H +VKTG D
Sbjct: 350 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 409
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+V T LV+ YG G + AQK+F+ +P NVVSWTSL+ GY + P ++V+ M +
Sbjct: 410 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 469
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G T T ++C LE LG Q+ ++++Y ED SV NSL S++S+ S+
Sbjct: 470 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 529
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F+ + E +++SW +I A +G + LR F M + N TL+S+ SVC +
Sbjct: 530 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 589
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +L+ G +H L +KLG SN+ + N+++ LY + G ++A+ +F M+ +L++WN+M
Sbjct: 590 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 649
Query: 349 IAGH-------------AQMMDLAKDDLSAHN---GG-------TEALSIFSKLNSSGMK 385
+A + A+++ + K D N GG EA+ + + G+
Sbjct: 650 MACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIP 709
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
+ T S L + L LE+G+Q+H L +K GF SD+ V A ++MY KCG + ++
Sbjct: 710 ANYITMVS-LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKM 768
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
+ R+ +SW +I+ FA H +A + F +ML G +P+ VTFV L+AC++ G+V
Sbjct: 769 LPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLV 828
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
E L Y++ M +E+ + P ++H +C+ID+ R G + A FIK+M PN++ W +A
Sbjct: 829 DEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLA 888
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
CR HGN+EL AE LL+L P D +Y + ++ ++G+WEDV ++ + +
Sbjct: 889 ACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQ 948
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESAS 684
SW+++KDKV+SF + HPQ++ I L EL++ K GY SF L D +E
Sbjct: 949 PACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQK 1008
Query: 685 VY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
Y HSE+LA+AFGL+NTP S + + K+ +C DCH+ K ++ + R+I++RD R
Sbjct: 1009 EYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYR 1068
Query: 741 LHKFVNGHCTCRDF 754
H F G C+C D+
Sbjct: 1069 FHHFSGGKCSCGDY 1082
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 153/588 (26%), Positives = 264/588 (44%), Gaps = 124/588 (21%)
Query: 61 EALSVLTEGP-KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
EAL +L+ P ++ S Y+ +LQ C+++K+ +IH H++ G D + T L+ Y
Sbjct: 16 EALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFY 75
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
K G++ A+ VFD +P +VVSWT+++SGY QN + E A +F DM G
Sbjct: 76 VKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCG--------- 126
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
++L +S CG + A F + E+
Sbjct: 127 ------------------------------VKANHALVDFHSKCGKMEDASYLFGTMMER 156
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+V+SW +IG G A F ML G+ P+ +TL S+ L + Q+H
Sbjct: 157 DVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIH 216
Query: 300 SLGIKLGYAS----------------------NLR------------------------- 312
+ +LGY S +LR
Sbjct: 217 GIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYT 276
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----MMDLAK---DDLSA 365
+ N+++ +Y K G +++A++ FD M N+++W ++I+G+A+ M A+ D++
Sbjct: 277 MGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRH 336
Query: 366 HNGGT---------------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL-EQGEQ 409
N + EA+ +F ++ G++P+ + +S++T CSR + ++G Q
Sbjct: 337 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 396
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H +KTG L DV VGTALV+ Y G + A ++F EM ++SWTS++ G+++
Sbjct: 397 VHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 456
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACS---NAGMVYEALGYFEMMQKEYKIKPVMD 526
+ L +++ M GV NQ TF ++C + + Y+ LG+ +Y + +
Sbjct: 457 PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI----IQYGFEDSVS 512
Query: 527 HYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI MF +EEA FD + + D + W+ I+ HG
Sbjct: 513 VANSLISMFSSFSSVEEACYVFDHMNECDI----ISWNAMISAYAHHG 556
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 157/607 (25%), Positives = 278/607 (45%), Gaps = 90/607 (14%)
Query: 87 RKSLSNAEIIHAHIVKTG-SHQDFFVM-TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWT 144
RK + ++ + + TG +H+ + M L+++Y K G +E+A++ FD + NV+SWT
Sbjct: 251 RKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWT 310
Query: 145 SLI---------------------------------SGYVQNSQPELAIHVFLDMLEAGN 171
SLI SGYV+ E A+ +F M G
Sbjct: 311 SLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGV 370
Query: 172 YPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P + + +TACS S G Q+H +VVK D VG +L Y + G + +A
Sbjct: 371 EPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQ 430
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
K F + + NV+SWT+++ ++G + L + +M EG+ N+ T +++S CG +
Sbjct: 431 KLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLE 490
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+G QV I+ G+ ++ V NS++ ++ V+EA +FD M+ ++++WNAMI+
Sbjct: 491 DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 550
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+A H E+L F + + + T SS+L++CS + L+ G I
Sbjct: 551 AYAH-----------HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGI 599
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H L +K G S+V + L+ +Y + GR E A VF M+ R LISW SM+ +
Sbjct: 600 HGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKC 659
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
L++ ++L G +P++VT+ + + EA+ ++++++ K + +Y+
Sbjct: 660 LDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIRE----KGIPANYIT 714
Query: 531 LIDMF--VRLGCIEEA---FDFIKKMDFEPN----------------------------- 556
++ + L +EE + K+ FE +
Sbjct: 715 MVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPIN 774
Query: 557 --EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK-DCESYAMLLDIFVSAGRW-EDVAV 612
+ W++ I+ RHG + ++LKL PK D ++ LL G E +A
Sbjct: 775 RSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAY 834
Query: 613 VKNLTRE 619
++TRE
Sbjct: 835 YDSMTRE 841
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 176/473 (37%), Gaps = 135/473 (28%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C ++ + G IH +++ D + L Y G + +A F+ + E++V
Sbjct: 37 LQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSV 96
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT ++ +NG + FS M G++ N
Sbjct: 97 VSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKAN-------------------------- 130
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
++++ + KCG +++A LF M ++V+WNAMI G+A + A D
Sbjct: 131 -------------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA-VQGFADD 176
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ +F + G+ PD YT S+L + L QIH + + G+ S
Sbjct: 177 ----------SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGS 226
Query: 422 -DVV----------------------------------------------VGTALVNMYK 434
D+V +G AL++MY
Sbjct: 227 YDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYA 286
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH----------------------- 471
K G IE A R F EM + +ISWTS+I+G+A H H
Sbjct: 287 KSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTML 346
Query: 472 ----------QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+A+ LF M GV PN + ACS +G Y A F++ K
Sbjct: 347 SGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSG--YMADEGFQVHGFVVKT 404
Query: 522 KPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ D Y+ L+ + +G + A ++M + N V W+ + G GN
Sbjct: 405 GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 456
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 100/375 (26%)
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
I +C + + G +H+ I G+ S+L + ++ Y+K G V A+ +FDGM +
Sbjct: 36 ILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERS 95
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+V+W AM++G++Q NG E A +FS + G+K +
Sbjct: 96 VVSWTAMVSGYSQ------------NGRFEKAFVLFSDMRHCGVKAN------------- 130
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
ALV+ + KCG++E AS +F M R ++SW +M
Sbjct: 131 --------------------------HALVDFHSKCGKMEDASYLFGTMMERDVVSWNAM 164
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGY 511
I G+A + + +F ML G+ P+ T L A + G + A LGY
Sbjct: 165 IGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 224
Query: 512 FE---------------------------MMQKE----------YKIKPVMDHYMCLIDM 534
M++K+ Y + + LIDM
Sbjct: 225 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDM 284
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
+ + G IE+A +M+ E N + W+ I+G +HG + +A +++ ++ S+
Sbjct: 285 YAKSGEIEDAKRAFDEME-EKNVISWTSLISGYAKHGYGHMA-HARYVFDEMRHRNEASW 342
Query: 595 AMLLDIFVSAGRWED 609
+ +L +V G +E+
Sbjct: 343 STMLSGYVRVGLYEE 357
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/709 (33%), Positives = 391/709 (55%), Gaps = 27/709 (3%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P ++ + ++S+ E PK +L++C K++ + IHAH++KT V
Sbjct: 9 PAKTPTAKTSISLFPENPKTL------ILEQC---KTIRDLNEIHAHLIKTRLLLKPKVA 59
Query: 113 TFLVNVYGKC--GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
L+ +M+ A +F + + ++ +I G+ P AI +F +M E
Sbjct: 60 ENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENS 119
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P T L CS L+++ G+QIHA ++K V N+L +Y+ CG + A
Sbjct: 120 VQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVAR 179
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F+ + E+NV +W ++ ++G + ++ F +ML I+ +E TL S+ + CG +
Sbjct: 180 RVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLA 239
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L +G ++ + G N + S++ +Y KCG VD A++LFD M ++V W+AMI+
Sbjct: 240 DLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMIS 299
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G++Q + EAL +F ++ + + P+ T SIL+ C+ L ALE G+ +
Sbjct: 300 GYSQA-----------SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWV 348
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H K V +GTAL++ Y KCG +E + VF +M + ++SWT +I G A++
Sbjct: 349 HFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQG 408
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL+ F ML V PN VTF+G L+ACS+AG+V E F M +++ I+P ++HY C
Sbjct: 409 KKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGC 468
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G IEEAF FIK M +PN VIW +A C+ H N+E+G + +QL+ L+P
Sbjct: 469 MVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTH 528
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
Y +L +I+ S GRWED V+ +E+ + +T S I + ++ F D +H QS
Sbjct: 529 SGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQS 588
Query: 651 AEIFKVLDELVEKAKCFGY-----KQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSP 705
EI+ +++++++ K GY + + E D+ES+ +HSEKLAIAFGL+ +P +
Sbjct: 589 EEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTT 648
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I + K+ +C DCHN K+++ + REI+VRD R H F G C+C D+
Sbjct: 649 IRITKNLRVCTDCHNATKLVSKVFNREIVVRDRTRFHHFKEGSCSCNDY 697
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/684 (34%), Positives = 370/684 (54%), Gaps = 49/684 (7%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ F L+ Y K G + E + F+ LP + V+W LI GY + A+ + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 168 E--AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
+ N T VTL T L SS + LGKQIH V+K E VG+ L +Y+ G
Sbjct: 131 RDFSANL-TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 226 LNSAIKAFN------------------------------RIREKNVMSWTTVIGACGENG 255
++ A K F R EK+ +SW +I +NG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
A + + F +M +G++ +++ S+ CG + ++ G Q+H+ I+ + ++ V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KC + A+ +FD M N+V+W AM+ G+ Q EA+ I
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-----------GRAEEAVKI 358
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F + SG+ PD YT ++ C+ + +LE+G Q H + +G + V V +LV +Y K
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG I+ ++R+F EM+ R +SWT+M++ +A + + +QLF+ M+ G++P+ VT G
Sbjct: 419 CGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
++ACS AG+V + YF++M EY I P + HY C+ID+F R G +EEA FI M F P
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 538
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ + W+ ++ CR GN+E+G +AAE L++L P Y +L I+ S G+W+ VA ++
Sbjct: 539 DAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF 675
RE+ + + SWI+ K K++SF +D P +I+ L+EL K GYK SF
Sbjct: 599 GMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSF 658
Query: 676 ELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
D EE+ V YHSE+LAIAFGL+ P PI V K+ +C DCHN K I+S+T
Sbjct: 659 VHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTG 718
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H+F +G C+C DF
Sbjct: 719 REILVRDAVRFHRFKDGTCSCGDF 742
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 157/285 (55%), Gaps = 2/285 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G K+ + S+L C +++ + IHA I++T +V + L+++Y KC +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD + + NVVSWT+++ GY Q + E A+ +FLDM +G P + TLG A++AC++
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ S+ G Q H + +V NSL +LY CG ++ + + FN + ++ +SWT +
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-KLG 306
+ A + G AV+ ++ F KM+ G++P+ TLT + S C + G + L + G
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIA 350
++ + ++ L+ + G ++EA + +GM + + W +++
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/667 (33%), Positives = 384/667 (57%), Gaps = 27/667 (4%)
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
F ++ Y K ++ A + F+++ +VVSW +I+ Q+ + A+ + ++M
Sbjct: 194 IFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHR 253
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G + T ++LTAC+ L S+ GKQ+HA V++ + D V ++L LY+ CGS
Sbjct: 254 KGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKE 313
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + FN ++++N +SWT +IG + + + F++M +E + ++F L ++ S C
Sbjct: 314 AKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFN 373
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ L +G Q+HSL +K G+ + V NS++ LY KCG + A+ +F MS ++V+W +M
Sbjct: 374 RMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSM 433
Query: 349 IAGHAQMMDLAK-----DDLSAHNGGT---------------EALSIFSK-LNSSGMKPD 387
I ++Q+ ++ K D ++ N T + L ++S L+ + PD
Sbjct: 434 ITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPD 493
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T+ ++ C+ + A + G+QI T+K G + +V V A + MY KCGRI A ++F
Sbjct: 494 WVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFD 553
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
++ + ++SW +MITG++ H + QA + F+DML G +P+ +++V L+ CS++G+V E
Sbjct: 554 LLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQE 613
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
YF+MM + + I P ++H+ C++D+ R G + EA D I KM +P +W ++ C
Sbjct: 614 GKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSAC 673
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
+ HGN EL AA+ + +L D SY +L I+ AG+ +D A V+ L R++ + +
Sbjct: 674 KIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPG 733
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYH 687
+SW+ +++KV+ FK +D HPQ I +DEL+EK GY + ES + ++H
Sbjct: 734 YSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTES------PRSEIHH 787
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLA+AFG+++ P PI ++K+ +C DCH IK+I+S+T RE ++RD R H F +G
Sbjct: 788 SEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSG 847
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 848 SCSCGDY 854
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 220/446 (49%), Gaps = 49/446 (10%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ E G ++ +++Y S L C SL + +HA ++++ D +V + L
Sbjct: 242 REALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 301
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG+ +EA++VF++L N VSWT LI G +Q ++ +F M
Sbjct: 302 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 361
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C + + LG+Q+H+ +K V NSL SLY+ CG L +A F+
Sbjct: 362 FALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSS 421
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ E++++SWT++I GA ++G GL+ +
Sbjct: 422 MSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMY 481
Query: 265 SKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
S MLS+ + P+ T ++ C + + ++G Q+ +K G N+ V N+ + +Y K
Sbjct: 482 SAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 541
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EAQKLFD ++ ++V+WNAMI G++Q H G +A F + S G
Sbjct: 542 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQ-----------HGMGKQAAKTFDDMLSKG 590
Query: 384 MKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
KPD ++ ++L+ CS +++G+ +T G + + +V++ + G + A
Sbjct: 591 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 650
Query: 443 SRVFVEMSTR-TLISWTSMITGFANH 467
+ +M + T W ++++ H
Sbjct: 651 KDLIDKMPMKPTAEVWGALLSACKIH 676
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/578 (23%), Positives = 243/578 (42%), Gaps = 95/578 (16%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T + L+ C +R +L+ A +H +V G F+ L++ Y CG + +A+
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 130 KVFD-NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL------GTAL 182
++ ++ NV++ +++GY + A +F M N + +
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG------------------ 224
+C +L L Q+ K+ D V +L ++ CG
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 195
Query: 225 -------------SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
++ AI+ F + E++V+SW +I A ++G + L +M +G
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
++ + T TS + C + SL G Q+H+ I+ + V ++++ LY KCG EA+
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 315
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
++F+ + N V+W +I G Q +K ++ +F+++ + M D +
Sbjct: 316 RVFNSLQDRNSVSWTVLIGGSLQYECFSK-----------SVELFNQMRAELMAIDQFAL 364
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+++++ C + L G Q+H+L LK+G +VV +L+++Y KCG ++ A VF MS
Sbjct: 365 ATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSE 424
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R ++SWTSMIT ++ +A + F+ M N +T+ L A G + L
Sbjct: 425 RDIVSWTSMITAYSQIGNIIKAREFFDGM----ATRNAITWNAMLGAYIQHGAEEDGLKM 480
Query: 512 FEMMQKEYKIKPVMDHYMCL-----------------------------------IDMFV 536
+ M + + P Y+ L I M+
Sbjct: 481 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 540
Query: 537 RLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ G I EA FD + D V W+ I G +HG
Sbjct: 541 KCGRISEAQKLFDLLNGKDV----VSWNAMITGYSQHG 574
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 213/485 (43%), Gaps = 35/485 (7%)
Query: 173 PTNVT--LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P VT L AL +C S ++ + +H +V + N+L Y +CG+L+ A
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 231 KAFN-RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV---- 285
+ I+E NV++ ++ + G F +M + ++ S
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSW 135
Query: 286 --CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
CG + + Q+ L K + + V +++ ++++CG VD A +LF + +
Sbjct: 136 MSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIF 195
Query: 344 TWNAMIAGHAQMM----------DLAKDD----------LSAHNGGTEALSIFSKLNSSG 383
N+M+AG+A++ D+A+ D LS EAL + +++ G
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKG 255
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
++ D T++S LT C+RL +L G+Q+HA +++ D V +AL+ +Y KCG + A
Sbjct: 256 VRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK 315
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
RVF + R +SWT +I G + ++++LF M + +Q ++ C N
Sbjct: 316 RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRM 375
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ + K + ++ LI ++ + G ++ A +F+ E + V W+
Sbjct: 376 DLCLGRQLHSLCLKSGHNRAIVVSN-SLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSM 433
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
I + GN+ A E + ++ ++ +L ++ G ED + + +K
Sbjct: 434 ITAYSQIGNI---IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK-D 489
Query: 624 ETDDW 628
T DW
Sbjct: 490 VTPDW 494
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/666 (33%), Positives = 384/666 (57%), Gaps = 27/666 (4%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F ++ Y K ++ A + F+++ +VVSW +I+ Q+ + A+ + ++M
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G + T ++LTAC+ L S+ GKQ+HA V++ + D V ++L LY+ CGS A
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ FN ++++N +SWT +IG + + + F++M +E + ++F L ++ S C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNR 384
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+ L +G Q+HSL +K G+ + V NS++ LY KCG + A+ +F MS ++V+W +MI
Sbjct: 385 MDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMI 444
Query: 350 AGHAQMMDLAK-----DDLSAHNGGT---------------EALSIFSK-LNSSGMKPDL 388
++Q+ ++ K D ++ N T + L ++S L+ + PD
Sbjct: 445 TAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDW 504
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T+ ++ C+ + A + G+QI T+K G + +V V A + MY KCGRI A ++F
Sbjct: 505 VTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDL 564
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
++ + ++SW +MITG++ H + QA + F+DML G +P+ +++V L+ CS++G+V E
Sbjct: 565 LNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEG 624
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
YF+MM + + I P ++H+ C++D+ R G + EA D I KM +P +W ++ C+
Sbjct: 625 KLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACK 684
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
HGN EL AA+ + +L D SY +L I+ AG+ +D A V+ L R++ + + +
Sbjct: 685 IHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGY 744
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYHS 688
SW+ +++KV+ FK +D HPQ I +DEL+EK GY + ES + ++HS
Sbjct: 745 SWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYVRTES------PRSEIHHS 798
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLA+AFG+++ P PI ++K+ +C DCH IK+I+S+T RE ++RD R H F +G
Sbjct: 799 EKLAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGS 858
Query: 749 CTCRDF 754
C+C D+
Sbjct: 859 CSCGDY 864
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 141/600 (23%), Positives = 251/600 (41%), Gaps = 121/600 (20%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG---------- 123
T + L+ C +R +L+ A +H +V G F+ L++ Y CG
Sbjct: 4 TQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLR 63
Query: 124 ----------------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
++ +A+++FD +PR +V SW +L+SGY Q + +
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLE 123
Query: 162 VFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
F+ M +G+ P T + +C +L L Q+ K+ D V +L ++
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMF 183
Query: 221 STCG-------------------------------SLNSAIKAFNRIREKNVMSWTTVIG 249
CG ++ AI+ F + E++V+SW +I
Sbjct: 184 VRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIA 243
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A ++G + L +M +G++ + T TS + C + SL G Q+H+ I+
Sbjct: 244 ALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQI 303
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V ++++ LY KCG EA+++F+ + N V+W +I G Q +K
Sbjct: 304 DPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK--------- 354
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
++ +F+++ + M D + +++++ C + L G Q+H+L LK+G +VV +L
Sbjct: 355 --SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y KCG ++ A VF MS R ++SWTSMIT ++ +A + F+ M N
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGM----ATRNA 468
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL------------------ 531
+T+ L A G + L + M + + P Y+ L
Sbjct: 469 ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIG 528
Query: 532 -----------------IDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
I M+ + G I EA FD + D V W+ I G +HG
Sbjct: 529 HTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDV----VSWNAMITGYSQHG 584
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 220/446 (49%), Gaps = 49/446 (10%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL ++ E G ++ +++Y S L C SL + +HA ++++ D +V + L
Sbjct: 252 REALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASAL 311
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG+ +EA++VF++L N VSWT LI G +Q ++ +F M
Sbjct: 312 IELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQ 371
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
L T ++ C + + LG+Q+H+ +K V NSL SLY+ CG L +A F+
Sbjct: 372 FALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSS 431
Query: 236 IREKNVMSWTTVI-------------------------------GACGENGEAVQGLRFF 264
+ E++++SWT++I GA ++G GL+ +
Sbjct: 432 MSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMY 491
Query: 265 SKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
S MLS+ + P+ T ++ C + + ++G Q+ +K G N+ V N+ + +Y K
Sbjct: 492 SAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSK 551
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG + EAQKLFD ++ ++V+WNAMI G++Q H G +A F + S G
Sbjct: 552 CGRISEAQKLFDLLNGKDVVSWNAMITGYSQ-----------HGMGKQAAKTFDDMLSKG 600
Query: 384 MKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
KPD ++ ++L+ CS +++G+ +T G + + +V++ + G + A
Sbjct: 601 AKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEA 660
Query: 443 SRVFVEMSTR-TLISWTSMITGFANH 467
+ +M + T W ++++ H
Sbjct: 661 KDLIDKMPMKPTAEVWGALLSACKIH 686
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 215/473 (45%), Gaps = 33/473 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL A +C +L R + + A + E + N + + Y+ GSL+ A + F+R+
Sbjct: 44 TLLHAYLSCGALSDAR--RLLRADI----KEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTSISSVCGTMLSLRVG 295
++V SW T++ + + GL F M G PN FT + CG + +
Sbjct: 98 PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELA 157
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+ L K + + V +++ ++++CG VD A +LF + + N+M+AG+A++
Sbjct: 158 PQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKL 217
Query: 356 M----------DLAKDD----------LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
D+A+ D LS EAL + +++ G++ D T++S L
Sbjct: 218 YGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSL 277
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
T C+RL +L G+Q+HA +++ D V +AL+ +Y KCG + A RVF + R +
Sbjct: 278 TACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSV 337
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWT +I G + ++++LF M + +Q ++ C N + +
Sbjct: 338 SWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLC 397
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
K + ++ LI ++ + G ++ A +F+ E + V W+ I + GN+
Sbjct: 398 LKSGHNRAIVVSN-SLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI-- 453
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
A E + ++ ++ +L ++ G ED + + +K T DW
Sbjct: 454 -IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQK-DVTPDW 504
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/712 (32%), Positives = 390/712 (54%), Gaps = 21/712 (2%)
Query: 51 SEPVRSLGFQEALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
SE + F+E++S+ + K+ ++ +L+ + + +H +++K G
Sbjct: 168 SEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFG 227
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+ V+ L+ Y K G +E A +FD L +VVSW S+I+G V N + +F+ M
Sbjct: 228 SNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 287
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
L G TL + L AC+++ ++ LG+ +H + VK ++ N+L +YS CG+L
Sbjct: 288 LILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 347
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
N A + F ++ + ++SWT++I A G + F +M S+G++P+ +T+TSI C
Sbjct: 348 NGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 407
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
SL G VHS IK G SNL V N+++ +Y KCG V+EA+ +F + ++V+WN
Sbjct: 408 ACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 467
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
MI G++Q + EAL +F + KPD T + +L C+ L AL++
Sbjct: 468 TMIGGYSQNLL-----------PNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDK 515
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G +IH L+ G+ SD+ V ALV+MY KCG + A +F + + LISWT MI G+
Sbjct: 516 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGM 575
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H ++A+ F +M +AG+ P++ +F L ACS++G++ E +F M+ E ++P ++
Sbjct: 576 HGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLE 635
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C++D+ R+G + +A+ FI+ M +P+ IW V ++GCR H +++L AE + +L
Sbjct: 636 HYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFEL 695
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P + Y +L +++ A +WE+V ++ ++ + SWI + K F +
Sbjct: 696 EPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSK 755
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE-----ESASVYHSEKLAIAFGLLNTP 701
HPQ+ +I +L +L + + Y + L +E E HSEK A+AFG+LN P
Sbjct: 756 HPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLP 815
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
+ V K+ +C DCH K ++ T EI++RDS R H F +G C+CRD
Sbjct: 816 PGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRD 867
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 292/564 (51%), Gaps = 45/564 (7%)
Query: 59 FQEALSVLTEGPKVQT--SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ A+ +LT+ + +SY S+LQ C +KSL + + +H+ I+ G D + LV
Sbjct: 77 LRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLV 136
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y CG++ + +K+FD + V W L+S Y + ++ +F M + G
Sbjct: 137 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 196
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L ++L ++ K++H YV+K +T+V NSL + Y G + SA F+ +
Sbjct: 197 TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 256
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E +V+SW ++I C NG + GL F +ML G++ + TL S+ C + +L +G
Sbjct: 257 SEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGR 316
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H G+K ++ + N+++ +Y KCG ++ A ++F M +V+W ++IA +
Sbjct: 317 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAY---- 372
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
++ L ++A+ +F ++ S G++PD+YT +SI+ C+ +L++G +H+ +K
Sbjct: 373 --VREGLY-----SDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 425
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G S++ V AL+NMY KCG +E A VF ++ + ++SW +MI G++ + L ++AL+L
Sbjct: 426 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALEL 485
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGYFEMMQKEYKIKPVMDH 527
F DM +P+ +T L AC+ + + GYF + H
Sbjct: 486 FLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL-----------H 533
Query: 528 YMC-LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAE 581
C L+DM+ + G + A FD I K D + W+V IAG H GN + +
Sbjct: 534 VACALVDMYAKCGLLVLAQLLFDMIPKKDL----ISWTVMIAGYGMHGFGNEAISTFNEM 589
Query: 582 QLLKLKPKDCESYAMLLDIFVSAG 605
++ ++P D S++ +L+ +G
Sbjct: 590 RIAGIEP-DESSFSAILNACSHSG 612
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/686 (34%), Positives = 386/686 (56%), Gaps = 19/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++V +L L + IH ++++G Q V L+N+Y K G++ A+ VF +
Sbjct: 937 TFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQM 996
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES-IRLG 194
++++SW ++ISG + E ++ +F+ +L P T+ + L ACSSLE L
Sbjct: 997 NEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLA 1056
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
QIHA +K D+ V +L +YS G + A F ++ SW ++ +
Sbjct: 1057 TQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVS 1116
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + LR + M G + ++ TL + + G ++ L+ G Q+H++ +K G+ +L V
Sbjct: 1117 GDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVT 1176
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ ++ +YLKCG ++ A+++F + + V W MI+G + NG E AL
Sbjct: 1177 SGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVE------------NGQEEHAL 1224
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ ++ S ++PD YTF++++ CS L ALEQG QIHA +K D V T+LV+MY
Sbjct: 1225 FTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMY 1284
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE A +F +TR + SW +MI G A H + +ALQ F+ M GV P++VTF+
Sbjct: 1285 AKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFI 1344
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+V EA F MQK Y I+P ++HY CL+D R G IEEA I M F
Sbjct: 1345 GVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPF 1404
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
E + ++ + CR + E G AE+LL L+P D +Y +L +++ +A +WE+VA
Sbjct: 1405 EASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASA 1464
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+N+ R+ + + +SW+ +K+KV+ F D H ++ I+ ++ ++++ + GY
Sbjct: 1465 RNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIREEGYVPDT 1524
Query: 674 SFELT-----DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D+E + YHSEKLAIA+GL+ TP + + V+K+ +C DCH+ IK I+ +
Sbjct: 1525 DFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHSAIKYISKV 1584
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI++RD+ R H F NG C+C D+
Sbjct: 1585 FKREIVLRDANRFHHFRNGICSCGDY 1610
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/560 (26%), Positives = 262/560 (46%), Gaps = 71/560 (12%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+V+ W +S ++Q + A+ F+DM+ + +T LT + L + LGKQIH
Sbjct: 899 DVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIH 958
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
V++ + SVGN L ++Y GS++ A F ++ E +++SW T+I C +G
Sbjct: 959 GIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEE 1018
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTML-SLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ F +L + + P++FT+ S+ C ++ + Q+H+ +K G + V ++
Sbjct: 1019 CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTAL 1078
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y K G ++EA+ LF +L +WNA++ G+ D K AL ++
Sbjct: 1079 IDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPK-----------ALRLYI 1127
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ SG + D T + LV L+QG+QIHA+ +K GF D+ V + +++MY KCG
Sbjct: 1128 LMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCG 1187
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
+E A RVF E+ + ++WT+MI+G + AL + M L+ V+P++ TF +
Sbjct: 1188 EMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVK 1247
Query: 498 ACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFE 554
ACS + AL + K+ D ++ L+DM+ + G IE+A K+ +
Sbjct: 1248 ACS----LLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTR 1303
Query: 555 PNEVIWSVFIAGCRRHGNMELG-------------------------------------- 576
W+ I G +HGN +
Sbjct: 1304 -RIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYEN 1362
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTREEKLS-----------E 624
FY+ ++ ++P + E Y+ L+D AGR E+ V+ ++ E S +
Sbjct: 1363 FYSMQKNYGIEP-EIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQ 1421
Query: 625 TDDWSWIRIKDKVYSFKPND 644
D + R+ +K+ + +P+D
Sbjct: 1422 VDRETGKRVAEKLLALEPSD 1441
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 225/483 (46%), Gaps = 48/483 (9%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L++ + LS + HA I+ +G H D FV L+ +Y KCG++ A+K+FD P
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 139 N--VVSWTSLISGYVQNS-QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N +V+W +++S ++ + H+F + + T TL C S +
Sbjct: 721 NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+H Y VK + D V +L ++Y+ G + A F+ + ++V+ W ++ A +
Sbjct: 781 SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + FS+ G +P++ TL ++S V ++ + L YA+ L
Sbjct: 841 LEYEAMLLFSEFHRTGFRPDDVTLRTLSRV------VKCKKNILELKQFKAYATKL---- 890
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++Y G +++ WN ++ Q + EA+
Sbjct: 891 ---FMYDDDG--------------SDVIVWNKALSRFLQRGE-----------AWEAVDC 922
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F + +S + D TF +LT+ + L LE G+QIH + +++G V VG L+NMY K
Sbjct: 923 FVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVK 982
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
G + RA VF +M+ LISW +MI+G L ++ +F +L + P+Q T
Sbjct: 983 AGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASV 1042
Query: 496 LAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA-FDFIKKM 551
L ACS+ G Y A ++ K V+D ++ LID++ + G +EEA F F+ +
Sbjct: 1043 LRACSSLEGGYYLAT---QIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQD 1099
Query: 552 DFE 554
F+
Sbjct: 1100 GFD 1102
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 174/393 (44%), Gaps = 61/393 (15%)
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN--VMSWTTVI 248
+ LGK+ HA ++ D V N+L ++Y+ CGSL+SA K F+ + N +++W ++
Sbjct: 672 LSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAIL 731
Query: 249 GACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
A + + G F + + TL + +C S +H +K+G
Sbjct: 732 SALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGL 791
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ V +++ +Y K GL+ EA+ LFDGM+ ++V WN M+ + +D +
Sbjct: 792 QWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAY---VDTCLE------ 842
Query: 368 GGTEALSIFSKLNSSGMKPD---LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
EA+ +FS+ + +G +PD L T S ++ ++ L+Q +
Sbjct: 843 --YEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFK---------------A 885
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
T L MY G +I W ++ F + +A+ F DM+ +
Sbjct: 886 YATKLF-MYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSR 930
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI--KPVMDHYM----CLIDMFVRL 538
V + +TFV L V L E+ ++ + I + +D + CLI+M+V+
Sbjct: 931 VACDGLTFVVMLT-------VVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKA 983
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G + A +M+ E + + W+ I+GC G
Sbjct: 984 GSVSRARSVFGQMN-EVDLISWNTMISGCTLSG 1015
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/704 (33%), Positives = 398/704 (56%), Gaps = 24/704 (3%)
Query: 61 EALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + E K T ++V+ LQ C + + IHA ++K+ + + FV L+
Sbjct: 301 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 360
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y + G M EA +F N+ + +SW S++SG+VQN A+ + +M +AG P V
Sbjct: 361 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 420
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + + A + + G QIHAY +K + D VGNSL +Y+ S+ F+++
Sbjct: 421 AVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 480
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+K+V+SWTT+I +NG + L F ++ EGI + ++SI C + +
Sbjct: 481 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 540
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++HS I+ G S+L ++N I+ +Y +CG VD A ++F+ + ++V+W +MI+ +
Sbjct: 541 EIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV--- 596
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG EAL +F + +G++PD + SIL+ + L AL++G++IH +
Sbjct: 597 ---------HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 647
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF+ + + + LV+MY +CG +E++ VF + + L+ WTSMI + H A+
Sbjct: 648 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAID 707
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF M + P+ + FV L ACS++G++ E + E M+ EY+++P +HY+CL+D+
Sbjct: 708 LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLL 767
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R +EEA+ F+K M+ EP +W + C+ H N ELG AA++LL++ P++ +Y
Sbjct: 768 GRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYV 827
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ +++ + RW+DV V+ + L + SWI + +KV++F D HPQS EI+
Sbjct: 828 LVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYS 887
Query: 656 VLDELVEK-AKCFGYKQQESFEL----TDEESASVY-HSEKLAIAFGLLNTPIVSPILVV 709
L ++ EK AK GY Q F L +E+ +Y HSE+LAIA+G+L TP + + +
Sbjct: 888 KLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRIT 947
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
K+ +C DCHNF K+I+ RE+++RD+ R H F G C+C D
Sbjct: 948 KNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGD 991
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 233/433 (53%), Gaps = 15/433 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+Y S+L+ C ++K+LS + +HAH++ + + F+ T LV +YGKCG + +A+K+FD
Sbjct: 116 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 175
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P + +W ++I YV N +P ++ ++ +M +G T L AC L+ R G
Sbjct: 176 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCG 235
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIGACGE 253
++H +K V NS+ +Y+ C LN A + F+R+ EK +V+SW ++I A
Sbjct: 236 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 295
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG++++ LR F +M + PN +T + C ++ G +H+ +K Y N+ V
Sbjct: 296 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 355
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEA 372
N+++ +Y + G + EA +F M + ++WN+M++G Q NG EA
Sbjct: 356 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ------------NGLYHEA 403
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L + ++ +G KPDL SI+ +R G QIHA +K G SD+ VG +LV+M
Sbjct: 404 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDM 463
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K ++ +F +M + ++SWT++I G A + +AL+LF ++ L G+ + +
Sbjct: 464 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 523
Query: 493 VGALAACSNAGMV 505
L ACS ++
Sbjct: 524 SSILLACSGLKLI 536
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 276/530 (52%), Gaps = 31/530 (5%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N EP+ SL + V G + ++ +L+ C K +H +K G
Sbjct: 194 NGEPLGSLELYREMRV--SGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIV 251
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV +V +Y KC ++ A+++FD +P + +VVSW S+IS Y N Q A+ +F +M +
Sbjct: 252 FVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK 311
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
A P T AL AC I+ G IHA V+K + V N+L ++Y+ G +
Sbjct: 312 ASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGE 371
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F + + + +SW +++ +NG + L+F+ +M G +P+ + SI +
Sbjct: 372 AANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASAR 431
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ G Q+H+ +K G S+L+V NS++ +Y K + +FD M ++V+W +
Sbjct: 432 SGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTI 491
Query: 349 IAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
IAGHAQ NG + AL +F ++ G+ D+ SSIL CS L +
Sbjct: 492 IAGHAQ------------NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 539
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
++IH+ ++ G LSD+V+ +V++Y +CG ++ A+R+F + + ++SWTSMI+ + ++
Sbjct: 540 KEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 598
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV---YEALGYFEMMQKEYKIKPV 524
L+++AL+LF M GV P+ ++ V L+A ++ + E G+ +++K + ++
Sbjct: 599 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGF--LIRKGFVLEGS 656
Query: 525 MDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ L+DM+ R G +E++ F+FI+ D V+W+ I HG
Sbjct: 657 LAS--TLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMINAYGMHG 700
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/704 (33%), Positives = 397/704 (56%), Gaps = 24/704 (3%)
Query: 61 EALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + E K T ++V+ LQ C + + IHA ++K+ + + FV L+
Sbjct: 265 EALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALI 324
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y + G M EA +F N+ + +SW S++SG+VQN A+ + +M +AG P V
Sbjct: 325 AMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLV 384
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + + A + + G QIHAY +K + D VGNSL +Y+ S+ F+++
Sbjct: 385 AVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKM 444
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+K+V+SWTT+I +NG + L F ++ EGI + ++SI C + +
Sbjct: 445 PDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVK 504
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++HS I+ G S+L ++N I+ +Y +CG VD A ++F+ + ++V+W +MI+ +
Sbjct: 505 EIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYV--- 560
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG EAL +F + +G++PD + SIL+ + L AL++G++IH +
Sbjct: 561 ---------HNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLI 611
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF+ + + + LV+MY +CG +E++ VF + + L+ WTSMI + H A+
Sbjct: 612 RKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAID 671
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF M + P+ + FV L ACS++G++ E + E M+ EY+++P +HY CL+D+
Sbjct: 672 LFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLL 731
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R +EEA+ F+K M+ EP +W + C+ H N ELG AA++LL++ P++ +Y
Sbjct: 732 GRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYV 791
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ +++ + RW+DV V+ + L + SWI + +KV++F D HPQS EI+
Sbjct: 792 LVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYS 851
Query: 656 VLDELVEK-AKCFGYKQQESFEL----TDEESASVY-HSEKLAIAFGLLNTPIVSPILVV 709
L ++ EK AK GY Q F L +E+ +Y HSE+LAIA+G+L TP + + +
Sbjct: 852 KLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGASLRIT 911
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
K+ +C DCHNF K+I+ RE+++RD+ R H F G C+C D
Sbjct: 912 KNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVCSCGD 955
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 233/433 (53%), Gaps = 15/433 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+Y S+L+ C ++K+LS + +HAH++ + + F+ T LV +YGKCG + +A+K+FD
Sbjct: 80 AYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDG 139
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P + +W ++I YV N +P ++ ++ +M +G T L AC L+ R G
Sbjct: 140 MPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYG 199
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIGACGE 253
++H +K V NS+ +Y+ C LN A + F+R+ EK +V+SW ++I A
Sbjct: 200 AEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSS 259
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG++++ LR F +M + PN +T + C ++ G +H+ +K Y N+ V
Sbjct: 260 NGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFV 319
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEA 372
N+++ +Y + G + EA +F M + ++WN+M++G Q NG EA
Sbjct: 320 ANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ------------NGLYHEA 367
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L + ++ +G KPDL SI+ +R G QIHA +K G SD+ VG +LV+M
Sbjct: 368 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDM 427
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K ++ +F +M + ++SWT++I G A + +AL+LF ++ L G+ + +
Sbjct: 428 YAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMI 487
Query: 493 VGALAACSNAGMV 505
L ACS ++
Sbjct: 488 SSILLACSGLKLI 500
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 276/530 (52%), Gaps = 31/530 (5%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N EP+ SL + V G + ++ +L+ C K +H +K G
Sbjct: 158 NGEPLGSLELYREMRV--SGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIV 215
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV +V +Y KC ++ A+++FD +P + +VVSW S+IS Y N Q A+ +F +M +
Sbjct: 216 FVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQK 275
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
A P T AL AC I+ G IHA V+K + V N+L ++Y+ G +
Sbjct: 276 ASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGE 335
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F + + + +SW +++ +NG + L+F+ +M G +P+ + SI +
Sbjct: 336 AANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASAR 395
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ G Q+H+ +K G S+L+V NS++ +Y K + +FD M ++V+W +
Sbjct: 396 SGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTI 455
Query: 349 IAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
IAGHAQ NG + AL +F ++ G+ D+ SSIL CS L +
Sbjct: 456 IAGHAQ------------NGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSV 503
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
++IH+ ++ G LSD+V+ +V++Y +CG ++ A+R+F + + ++SWTSMI+ + ++
Sbjct: 504 KEIHSYIIRKG-LSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHN 562
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV---YEALGYFEMMQKEYKIKPV 524
L+++AL+LF M GV P+ ++ V L+A ++ + E G+ +++K + ++
Sbjct: 563 GLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGF--LIRKGFVLEGS 620
Query: 525 MDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ L+DM+ R G +E++ F+FI+ D V+W+ I HG
Sbjct: 621 LAS--TLVDMYARCGTLEKSRNVFNFIRNKDL----VLWTSMINAYGMHG 664
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 234/729 (32%), Positives = 398/729 (54%), Gaps = 60/729 (8%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN---MEEA 128
++ S + LL+ C KS IHA + G H F ++ L++ + G+ ++ +
Sbjct: 7 LENPSSLCLLESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHS 63
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG-NYPTNVTLGTALTACSS 187
+ +F + N+ W ++I GY ++ P AI +++ M+ G P N T L +C+
Sbjct: 64 RLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCAR 123
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ G ++H++++K+ E D V N+L LYS G+LN A F+ ++++S+ T+
Sbjct: 124 LSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTM 183
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK--L 305
I E + L F +M + GI P+EFT ++ SVC + VG Q+H+ K
Sbjct: 184 IKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLR 243
Query: 306 GYASNLRVRNSIMYLYLKCGL--------------------------------VDEAQKL 333
SN+ ++++I+ +Y KCGL ++ A+KL
Sbjct: 244 SIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKL 303
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F+ M ++++W AMI+G++Q +EAL +F ++ + G+KPD T +
Sbjct: 304 FNHMHERDVISWTAMISGYSQAGQC-----------SEALELFKEMEALGIKPDEVTLVA 352
Query: 394 ILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRIERASRVF--VEMS 450
+L+ C+RL A + G++++ ++ G F + ++ A+++MY KCG I+ A +F V +
Sbjct: 353 VLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKN 412
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+T + SMI G A H L A+ +F +++ G++P++VTFVG L AC ++G++ E
Sbjct: 413 MKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKK 472
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
FE M Y IKP M+HY C++D+ R GC+EEA+D ++KM FE N VIW ++ CR H
Sbjct: 473 LFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTH 532
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
GN+++G A ++LL+++ + Y +L +I A +WE+ V+ + + + + WS+
Sbjct: 533 GNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSY 592
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY---KQQESFELTDEESASV-- 685
I + ++ F +D HPQ EI +L ++ + K GY Q F++ +EE SV
Sbjct: 593 IELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDIDEEEKESVVS 652
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
YHSEKLA+AFGL+ I +VK+ +C DCH K+++ + REI VRD+ R H F
Sbjct: 653 YHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITVRDTMRFHHFR 712
Query: 746 NGHCTCRDF 754
NG C+C DF
Sbjct: 713 NGSCSCMDF 721
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 162/341 (47%), Gaps = 29/341 (8%)
Query: 277 FTLTSISSVC--GTMLSLRVGAQVHSLGIKLGYASNL----RVRNSIMYLYLKCGLVDEA 330
F L + SS+C + S + G Q+H+ I G + R+ + L K GL D +
Sbjct: 5 FLLENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGL-DHS 63
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM-KPDLY 389
+ LF + NL WN MI G+ S + EA+ ++ + + G+ P+ +
Sbjct: 64 RLLFSQIDCPNLFMWNTMIRGY-----------SRSDNPREAIVLYMSMIAKGIAPPNNF 112
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF +L C+RL +LE G ++H+ +K GF SD+ V AL+++Y G + A +F E
Sbjct: 113 TFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDES 172
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R L+S+ +MI G+A + AL LF +M +G+ P++ TFV + CS ++ E
Sbjct: 173 LVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCS---VLNEPN 229
Query: 510 GYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
++ + YK +D + L +DM+ + G I A M + WS +
Sbjct: 230 VGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVC 289
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
G R G + + A + + +D S+ ++ + AG+
Sbjct: 290 GYARCGEINV---ARKLFNHMHERDVISWTAMISGYSQAGQ 327
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/662 (33%), Positives = 372/662 (56%), Gaps = 17/662 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +VK G + + L+ +Y + G E+A+ VF + +++SW S+++ YVQ+ +
Sbjct: 420 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 479
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ + ++L+ G +VT +AL ACS+ E + K +HA ++ D VGN+
Sbjct: 480 CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNA 539
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L ++Y G + A K + + + ++W +IG EN E + ++ + + +GI N
Sbjct: 540 LVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPAN 599
Query: 276 EFTLTSISSVCGTMLSL-RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
T+ S+ C L + G +H+ + G+ S+ V+NS++ +Y KCG ++ + +F
Sbjct: 600 YITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIF 659
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
DG+ + + +TWNAM+A +A H G EAL IF ++ + G+ D ++FS
Sbjct: 660 DGLGNKSPITWNAMVAANAH-----------HGCGEEALKIFGEMRNVGVNLDQFSFSGG 708
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L + L LE+G+Q+H L +K GF SD+ V A ++MY KCG + ++ + R+
Sbjct: 709 LAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSR 768
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SW +I+ FA H +A + F +ML G +P+ VTFV L+AC++ G+V E L Y++
Sbjct: 769 LSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDS 828
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M +E+ + P ++H +C+ID+ R G + A FIK+M PN++ W +A CR HGN+E
Sbjct: 829 MTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLE 888
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AE LL+L P D +Y + ++ ++G+WEDV ++ + + SW+++K
Sbjct: 889 LARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLK 948
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSE 689
DKV+SF + HPQ++ I L EL++ K GY SF L D +E Y HSE
Sbjct: 949 DKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSE 1008
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LA+AFGL+NTP S + + K+ +C DCH+ K ++ + R+I++RD R H F G C
Sbjct: 1009 RLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKC 1068
Query: 750 TC 751
+C
Sbjct: 1069 SC 1070
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 157/529 (29%), Positives = 269/529 (50%), Gaps = 29/529 (5%)
Query: 54 VRSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQD 108
VR ++EA+ + + G V+ + ++ SL+ C +++ +H +VKTG D
Sbjct: 171 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGD 230
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+V T LV+ YG G + AQK+F+ +P NVVSWTSL+ GY + P ++V+ M +
Sbjct: 231 VYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQ 290
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G T T ++C LE LG Q+ ++++Y ED SV NSL S++S+ S+
Sbjct: 291 EGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEE 350
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F+ + E +++SW +I A +G + LR F M + N TL+S+ SVC +
Sbjct: 351 ACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSS 410
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +L+ G +H L +KLG SN+ + N+++ LY + G ++A+ +F M+ +L++WN+M
Sbjct: 411 VDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSM 470
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+A + Q D +G L I ++L G + TF+S L CS L + +
Sbjct: 471 MACYVQ-------DGKCLDG----LKILAELLQMGKVMNHVTFASALAACSNPECLIESK 519
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+HAL + GF ++VG ALV MY K G + A +V M ++W ++I G A +
Sbjct: 520 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 579
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACS------NAGMVYEALGYFEMMQKEYKIK 522
++A++ ++ + G+ N +T V L ACS GM A + + +K
Sbjct: 580 EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVK 639
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI M+ + G + + ++I + + W+ +A HG
Sbjct: 640 N------SLITMYAKCGDLNSS-NYIFDGLGNKSPITWNAMVAANAHHG 681
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 243/478 (50%), Gaps = 20/478 (4%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+ +HA + + F L+N+Y K GN+E A+ VFD + N SW++++SGYV+
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTS 211
E A+ +F M G P + + +TACS S G Q+H +VVK D
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG +L Y + G + +A K F + + NV+SWT+++ ++G + L + +M EG
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 292
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ N+ T +++S CG + +G QV I+ G+ ++ V NS++ ++ V+EA
Sbjct: 293 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 352
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+FD M+ ++++WNAMI+ +A H E+L F + + + T
Sbjct: 353 YVFDHMNECDIISWNAMISAYAH-----------HGLCRESLRCFHWMRHLHNETNSTTL 401
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
SS+L++CS + L+ G IH L +K G S+V + L+ +Y + GR E A VF M+
Sbjct: 402 SSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE 461
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R LISW SM+ + L++ ++L G N VTF ALAACSN + E+
Sbjct: 462 RDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIES--- 518
Query: 512 FEMMQKEYKIKPVMDHYM---CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+++ + D + L+ M+ +LG + EA ++ M +P+ V W+ I G
Sbjct: 519 -KIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 574
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 215/428 (50%), Gaps = 18/428 (4%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ L +L E G + ++ S L C N + L ++I+HA I+ G H V LV
Sbjct: 482 DGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALV 541
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+YGK G M EA+KV +P+ + V+W +LI G+ +N +P A+ + + E G +
Sbjct: 542 TMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYI 601
Query: 177 TLGTALTACSSLES-IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ + L ACS+ + ++ G IHA++V E D V NSL ++Y+ CG LNS+ F+
Sbjct: 602 TMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDG 661
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ K+ ++W ++ A +G + L+ F +M + G+ ++F+ + + + L G
Sbjct: 662 LGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEG 721
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H L IKLG+ S+L V N+ M +Y KCG + + K+ + + ++WN +I+ A+
Sbjct: 722 QQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR- 780
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH-ALT 414
H +A F ++ G KPD TF S+L+ C+ +++G + ++T
Sbjct: 781 ----------HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMT 830
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQA 473
+ G + ++++ + GR+ A EM ++W S++ H A
Sbjct: 831 REFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA 890
Query: 474 LQLFEDML 481
+ E +L
Sbjct: 891 RKTAEHLL 898
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 30/302 (9%)
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
F L S + M G +H+ I + N+++ +Y K G ++ A+ +FD
Sbjct: 99 FPLKGFSEITSQM----AGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDE 154
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M H N +W+ M++G+ ++ EA+ +F ++ G++P+ + +S++T
Sbjct: 155 MRHRNEASWSTMLSGYVRVGLY-----------EEAVGLFCQMWGLGVEPNGFMVASLIT 203
Query: 397 ICSRLVAL-EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
CSR + ++G Q+H +KTG L DV VGTALV+ Y G + A ++F EM ++
Sbjct: 204 ACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVV 263
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS---NAGMVYEALGYF 512
SWTS++ G+++ + L +++ M GV NQ TF ++C + + Y+ LG+
Sbjct: 264 SWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHI 323
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRR 569
+Y + + LI MF +EEA FD + + D + W+ I+
Sbjct: 324 ----IQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI----ISWNAMISAYAH 375
Query: 570 HG 571
HG
Sbjct: 376 HG 377
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
S + + G+ +HA + + L+NMY K G IE A VF EM R SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
+M++G+ L +A+ LF M GV PN + ACS +G Y A F++
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSG--YMADEGFQVHGFV 222
Query: 519 YKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
K + D Y+ L+ + +G + A ++M + N V W+ + G GN
Sbjct: 223 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDSGN 277
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/667 (34%), Positives = 377/667 (56%), Gaps = 31/667 (4%)
Query: 101 VKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA 159
+KTG D V L++++ + G++ A+KVF+ L VV WT +I+ YVQ A
Sbjct: 174 IKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKA 233
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
+ +FL MLE G P T+ + ++AC+ S LG+Q+H+ V++ DT V L +
Sbjct: 234 VELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDM 293
Query: 220 YSTCG---SLNSAIKAFNRIREKNVMSWTTVIGA---CGENGEAVQGLRFFSKMLSEGIQ 273
Y+ S+ A K F R+ NVMSWT +I CG G+ + +ML+E I+
Sbjct: 294 YTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCG--GQENNAVELLCEMLNESIE 351
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN T +S+ C + G Q+H+ +K + V N+++ +Y + G ++EA+K
Sbjct: 352 PNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKA 411
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD + NL++ ++ I G S S++ S + +TF+S
Sbjct: 412 FDQLYERNLLSTSSDIG----------------ETGRSNASWSSQIESMDVGVSTFTFAS 455
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM-STR 452
+L+ + + +G+Q+HAL++KTGF SD + +LV+MY +CG ++ A R F EM
Sbjct: 456 LLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDH 515
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+ISWTS+I+ A H + +AL LF DM+L+GV+PN VT++ L+ACS+ G+V E YF
Sbjct: 516 NVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYF 575
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
MQK++++ P M+HY C++D+ R G ++EA +FI +M + + ++W + CR + N
Sbjct: 576 RSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYEN 635
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+E+G AA ++ L+P+D Y +L +++ G W++VA +++L R LS+ SW+
Sbjct: 636 IEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMH 695
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYH 687
+ + ++ F+ D HP++ EI+ L L+ + K GY S L D +E + H
Sbjct: 696 VGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQH 755
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEK+A+AFGL+ T PI + K+ +C DCH+ IK I+ T REII+RDS R H+ +G
Sbjct: 756 SEKIAVAFGLITTLPTKPIRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDG 815
Query: 748 HCTCRDF 754
C+C ++
Sbjct: 816 KCSCGEY 822
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 256/507 (50%), Gaps = 42/507 (8%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDM 166
D V L+ +Y KCG++ A++VFD + + ++VSWT++ +N + A+ + +M
Sbjct: 78 DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137
Query: 167 LEAGNYPTNVTLGTALTACSSLESIR-LGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCG 224
LE+G P TL A AC E R G + + +K D SVG +L +++ G
Sbjct: 138 LESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNG 197
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L +A K FN + E+ V+ WT +I + G A + + F ML +G +P+ +T++S+ S
Sbjct: 198 DLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVS 257
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL---VDEAQKLFDGMSHVN 341
C S +G Q+HSL ++LG S+ V ++ +Y K + ++ A+K+F M N
Sbjct: 258 ACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHN 317
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFSSILTICS 399
+++W A+I+G+ Q GG E A+ + ++ + ++P+ T+SS+L C+
Sbjct: 318 VMSWTALISGYVQC------------GGQENNAVELLCEMLNESIEPNHLTYSSLLKACA 365
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L + G QIHA +KT + VVG ALV+MY + G +E A + F ++ R L+S +S
Sbjct: 366 NLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSS 425
Query: 460 MI--TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE-----ALGYF 512
I TG +N S S Q E M V + TF L+A + G+ + AL
Sbjct: 426 DIGETGRSNASWSSQ----IESM---DVGVSTFTFASLLSAAATVGLPTKGQQLHALSIK 478
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ + I L+ M+ R G +++A +M+ + N + W+ I+ +HG+
Sbjct: 479 TGFESDKGISN------SLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGH 532
Query: 573 ME--LGFYAAEQLLKLKPKDCESYAML 597
E L + L +KP D A+L
Sbjct: 533 AERALSLFHDMILSGVKPNDVTYIAVL 559
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 182/362 (50%), Gaps = 24/362 (6%)
Query: 193 LGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVIGA 250
LG+ +H ++ + D D V NSL ++YS CG + +A + F+ +R ++++SWT +
Sbjct: 61 LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLGY-A 308
NG + L +ML G++PN FTL + + C R G V IK G+
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+++ V +++ ++ + G + A+K+F+G+ +V W MI + Q G
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQ-------------G 227
Query: 369 GT--EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +A+ +F + G +PD YT SS+++ C+ + G+Q+H+L L+ G +SD V
Sbjct: 228 GCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVS 287
Query: 427 TALVNMYKKC---GRIERASRVFVEMSTRTLISWTSMITGFAN-HSLSHQALQLFEDMLL 482
LV+MY K +E A +VF M T ++SWT++I+G+ + A++L +ML
Sbjct: 288 CGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLN 347
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
+ PN +T+ L AC+N + K I V L+ M+ GC+E
Sbjct: 348 ESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKT-SIGNVNVVGNALVSMYAESGCME 406
Query: 543 EA 544
EA
Sbjct: 407 EA 408
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 8/289 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L E + +Y SLL+ C N + IHA ++KT V LV++Y + G
Sbjct: 345 MLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGC 404
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
MEEA+K FD L N++S +S I G S + + + ++ G + T + L+A
Sbjct: 405 MEEARKAFDQLYERNLLSTSSDI-GETGRSNASWSSQI--ESMDVG--VSTFTFASLLSA 459
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMS 243
+++ G+Q+HA +K E D + NSL S+YS CG L+ A +AF+ + + NV+S
Sbjct: 460 AATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVIS 519
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLG 302
WT++I A ++G A + L F M+ G++PN+ T ++ S C + ++ G + S+
Sbjct: 520 WTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQ 579
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ ++ L + GLV EA + + M + + W ++
Sbjct: 580 KDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALVWKTLLG 628
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 407 GEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGF 464
G +H L T L +D +V +L+ MY KCG + A RVF M R L+SWT+M
Sbjct: 62 GRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCL 121
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
+ +AL L +ML +G+RPN T A AC + + G +
Sbjct: 122 TRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGT 181
Query: 525 MDHYMC-LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
C LIDMF R G + A + E V+W++ I
Sbjct: 182 DVSVGCALIDMFARNGDLVAARKVFNGL-VERTVVVWTLMI 221
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/760 (33%), Positives = 401/760 (52%), Gaps = 77/760 (10%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+LGF + L P T +V L+ C SL + +HA + G + F+ +
Sbjct: 111 TLGFYCQMQRLGWLPDHYTFPFV--LKACGEIPSLRHGASVHAIVCANGLGSNVFICNSI 168
Query: 116 VNVYGKCGNMEEAQKVFDN-LPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
V +YG+CG +++A ++FD L R ++VSW S+++ YVQ Q A+ + M GN+
Sbjct: 169 VAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRM---GNH 225
Query: 173 ------PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
P +TL L AC+S+ +++ GKQ+H + V+ DD VGN+L S+Y+ C +
Sbjct: 226 YSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKM 285
Query: 227 NSAIKAFNRIREKNVMSW-----------------------------------TTVIGAC 251
N A K F I++K+V+SW + VI
Sbjct: 286 NEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGY 345
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK----LGY 307
+ G + L F +M G++PN TL S+ S C ++ +L G Q H+ IK L +
Sbjct: 346 AQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNW 405
Query: 308 ---ASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDLAKDD 362
+L V N ++ +Y KC A+ +FD + N+VTW MI G+AQ
Sbjct: 406 NDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQ-------- 457
Query: 363 LSAHNGGTEALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H +AL +F+++ + +KP+ +T S L C+RL L G Q+HA L+
Sbjct: 458 ---HGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENE 514
Query: 421 SDVV-VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
S+V+ VG L++MY K G I+ A VF M R ++SWTS++TG+ H +AL LF+
Sbjct: 515 SEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G + +TF+ L ACS++GMV + + YF M K + I P +HY C++D+ R G
Sbjct: 575 MQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAG 634
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+ EA + IK M EP V+W ++ R H N+ELG YAA +L +L ++ SY +L +
Sbjct: 635 RLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLLSN 694
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ +A RW+DVA +++L + + + SWI+ K +F D HP+S +I+ +L +
Sbjct: 695 LYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLD 754
Query: 660 LVEKAKCFGYKQQESFEL---TDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L+++ K GY Q SF L DEE + HSEKLA+A+G+L T PI + K+ +
Sbjct: 755 LIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRI 814
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH+ + I+ + EI++RDS R H F G C+CR +
Sbjct: 815 CGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSY 854
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 278/569 (48%), Gaps = 58/569 (10%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S T P T +SLL++C K+L NA++ H I G + F ++ V Y +CG
Sbjct: 22 STFTTSPP--TIPLISLLRQC---KTLINAKLAHQQIFVHGFTEMF---SYAVGAYIECG 73
Query: 124 NMEEAQKVFDNL--PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
EA + L V W +LI V+ + + + M G P + T
Sbjct: 74 ASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFV 133
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-- 239
L AC + S+R G +HA V + + NS+ ++Y CG+L+ A + F+ + E+
Sbjct: 134 LKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKI 193
Query: 240 -NVMSWTTVIGACGENGEAVQGLRFFSKM---LSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+++SW +++ A + G++ LR +M S ++P+ TL +I C ++ +L+ G
Sbjct: 194 EDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHG 253
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ- 354
QVH ++ G ++ V N+++ +Y KC ++EA K+F+G+ ++V+WNAM+ G++Q
Sbjct: 254 KQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQI 313
Query: 355 -----------MM---DLAKDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTF 391
MM D+ D ++ A G G EAL +F ++ G++P++ T
Sbjct: 314 GSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTL 373
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGF-------LSDVVVGTALVNMYKKCGRIERASR 444
+S+L+ C+ + AL G+Q HA +K D++V L++MY KC A
Sbjct: 374 ASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARS 433
Query: 445 VF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDML--LAGVRPNQVTFVGALAACS 500
+F +E + +++WT MI G+A H ++ AL+LF + ++PN T AL AC+
Sbjct: 434 IFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACA 493
Query: 501 NAG---MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
G + + Y + E ++ V + CLIDM+ + G I+ A M N
Sbjct: 494 RLGELRLGRQLHAYALRNENESEVLYVGN---CLIDMYSKSGDIDAARAVFDNMKLR-NV 549
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
V W+ + G HG E + +Q+ KL
Sbjct: 550 VSWTSLMTGYGMHGRGEEALHLFDQMQKL 578
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/693 (31%), Positives = 388/693 (55%), Gaps = 20/693 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
GP ++T + +LL+ C R L+ +HA + G + T L N+Y KC +A
Sbjct: 13 GPVLRT--FTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADA 70
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACS 186
++VFD +P + V+W ++++GY +N P A+ + M E G P +VTL + L AC+
Sbjct: 71 RRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACA 130
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++ +++HA+ ++ ++ +V ++ Y CG++ +A F+ + +N +SW
Sbjct: 131 DARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNA 190
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I +NG A + + F +M+ EG+ + ++ + CG + L +VH L +++G
Sbjct: 191 MIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVG 250
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL-VTWNAMIAGHAQMMDLAKDDLSA 365
+SN+ V N+++ Y KC D A ++F+ + + ++WNAMI G Q
Sbjct: 251 LSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQ----------- 299
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
+ +A +F+++ ++PD +T S++ + + Q IH +++ DV V
Sbjct: 300 NECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYV 359
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
TAL++MY KCGR+ A R+F R +I+W +MI G+ +H A++LFE+M G
Sbjct: 360 LTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGS 419
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
PN+ TF+ LAACS+AG+V E YF M+K+Y ++P M+HY ++D+ R G ++EA+
Sbjct: 420 LPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAW 479
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
FIK M EP ++ + C+ H N+EL +A+ + +L P++ + +L +I+ +A
Sbjct: 480 SFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANAS 539
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
W+DVA V+ ++ L +T WS I++K++V++F H + +I+ L +L+E+ K
Sbjct: 540 MWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIK 599
Query: 666 CFGYKQQES--FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY ++ D+ A + HSEKLAIA+GL+ T + I + K+ +C DCHN
Sbjct: 600 DMGYVPDTDSIHDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNA 659
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ LT REII+RD +R H F +G C+C D+
Sbjct: 660 TKLISLLTGREIIMRDIQRFHHFKDGKCSCGDY 692
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 6/292 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NGN+ +L ++ ++ EG V +S ++ LQ C L +H +V+ G
Sbjct: 198 NGNATEAMALFWR----MVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSS 253
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+ V L+ Y KC + A +VF+ L + +SW ++I G+ QN PE A +F M
Sbjct: 254 NVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARM 313
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
P + TL + + A + + + IH Y +++Q + D V +L +YS CG +
Sbjct: 314 QLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRV 373
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ A + F+ R+++V++W +I G +G + F +M G PNE T S+ + C
Sbjct: 374 SIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAAC 433
Query: 287 GTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ G + S+ G + +++ L + G +DEA M
Sbjct: 434 SHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM 485
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E + + + VS++ + A IH + ++ QD +V+T L+++Y KCG +
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD+ +V++W ++I GY + + A+ +F +M G+ P T + L ACS
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435
Query: 188 LESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSA---IKAFNRIREKNVMS 243
+ G++ A + K Y E ++ L G L+ A IK N E +
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIK--NMPIEPGISV 493
Query: 244 WTTVIGAC 251
+ ++GAC
Sbjct: 494 YGAMLGAC 501
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/682 (33%), Positives = 385/682 (56%), Gaps = 19/682 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ CV SL + + +H + K G D FV LV++Y + G ++ A KVF ++
Sbjct: 126 TFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM 182
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P +V SW ++ISG+ QN A+ V M G +T+ + L C+ + + G
Sbjct: 183 PVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH +V+K+ + D V N+L ++YS G L A F+++ ++++SW ++I A +N
Sbjct: 243 LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNN 302
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS-NLRVR 314
+ LRFF M GI+P+ T+ S++S+ + R+ + I+ + ++ +
Sbjct: 303 DPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG 362
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y K G ++ A +FD + + ++WN ++ G+ Q LA + + A+N E
Sbjct: 363 NALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQN-GLASEAIDAYNMMEECRD 421
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
P+ T+ SI+ S + AL+QG +IHA +K DV V T L+++Y
Sbjct: 422 TI---------PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYG 472
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCGR+E A +F E+ T + W ++I H +ALQLF+DML V+ + +TFV
Sbjct: 473 KCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVS 532
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS++G+V E F++MQKEY IKP + HY C++D+ R G +E+A++ ++ M +
Sbjct: 533 LLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQ 592
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ IW ++ C+ +GN ELG A+++LL++ ++ Y +L +I+ + +WE V V+
Sbjct: 593 PDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVR 652
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+L R+ L +T WS + + K F + HP+ EI+K L L K K GY S
Sbjct: 653 SLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYS 712
Query: 675 F---ELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F ++ ++E + HSE+LAIAFG+++TP SPI + K+ +C DCHN K I+ ++
Sbjct: 713 FVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRIS 772
Query: 730 AREIIVRDSKRLHKFVNGHCTC 751
REI+VRDS R H F +G C+C
Sbjct: 773 EREIVVRDSNRFHHFKDGICSC 794
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 158/521 (30%), Positives = 260/521 (49%), Gaps = 33/521 (6%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ + + +L CVN ++ + +HA ++ G Q+ + T L+N+Y G++ ++ F
Sbjct: 21 KDADFNALFNSCVN---VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTF 77
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELA---IHVFLDMLEAGNY-PTNVTLGTALTACSSL 188
D + + N+ SW S+IS YV+ + A ++ M G+ P T L AC SL
Sbjct: 78 DYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL 137
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
GK++H V K EDD V SL LYS G L+ A K F + K+V SW +I
Sbjct: 138 VD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG A L ++M EG++ + T+ SI VC + G +H +K G
Sbjct: 195 SGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S++ V N+++ +Y K G + +AQ +FD M +LV+WN++IA + Q +N
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ-----------NND 303
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGT 427
+ AL F + G++PDL T S+ +I S+L I ++ +L DVV+G
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVR 486
ALVNMY K G + A VF ++ + ISW +++TG+ + L+ +A+ + M
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI 423
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA 544
PNQ T+V + A S+ G + + + ++ K K +D ++ CLID++ + G +E+A
Sbjct: 424 PNQGTWVSIIPAYSHVGALQQGM---KIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
++ + V W+ IA HG E A QL K
Sbjct: 481 MSLFYEIPRD-TSVPWNAIIASLGIHGRGE----EALQLFK 516
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 206/410 (50%), Gaps = 19/410 (4%)
Query: 62 ALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL VL EG K+ T + S+L C + N +IH H++K G D FV L+N
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G +++AQ VFD + ++VSW S+I+ Y QN+ P A+ F M G P +T
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + + S L R+ + I +V++ + D D +GN+L ++Y+ G +N A F+++
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVG 295
K+ +SW T++ +NG A + + ++ M PN+ T SI + +L+ G
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H+ IK ++ V ++ LY KCG +++A LF + V WNA+IA
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS---- 501
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
L H G EAL +F + + +K D TF S+L+ CS +++G++ +
Sbjct: 502 -------LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ 554
Query: 416 KT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG 463
K G + +V++ + G +E+A + M + S W ++++
Sbjct: 555 KEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 17/308 (5%)
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H+L + G + N+ + ++ LY+ G + ++ FD + N+ +WN++I+ + +
Sbjct: 40 KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H +FS ++PD YTF IL C V+L G+++H K
Sbjct: 100 KY-------HEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFK 149
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF DV V +LV++Y + G ++ A +VFV+M + + SW +MI+GF + + AL +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEA-LGYFEMMQKEYKIKPVMDHYMCLIDMF 535
M GV+ + +T L C+ + V L + +++ + + LI+M+
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN--ALINMY 267
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN--MELGFYAAEQLLKLKPKDCES 593
+ G +++A +M+ + V W+ IA ++ + L F+ QL ++P D +
Sbjct: 268 SKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DLLT 325
Query: 594 YAMLLDIF 601
L IF
Sbjct: 326 VVSLTSIF 333
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 236/691 (34%), Positives = 376/691 (54%), Gaps = 20/691 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+V + S L+ C + I + V+ G ++ FV + +++ K G + EAQ+
Sbjct: 127 EVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQR 186
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P +VV W S+I GYVQ ++A +F +M +G P+ +T+ + + AC + +
Sbjct: 187 VFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGN 246
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++LGK +H YV+ +D V S +YS G + SA F ++ +N++SW +I
Sbjct: 247 LKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISG 306
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
C NG + F +++ + T+ S+ C SL G +H I+ + SN
Sbjct: 307 CVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESN 365
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
L + +I+ LY KCG + +A +F+ M N++TW AM+ G AQ NG
Sbjct: 366 LILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQ------------NGHA 413
Query: 371 E-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
E AL +F+++ G+ + TF S++ C+ L +L++G IH + GF D+V TAL
Sbjct: 414 EDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTAL 473
Query: 430 VNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
V+MY KCG+I A R+F S ++ ++ W SMITG+ H +QA+ ++ M+ G++PN
Sbjct: 474 VDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPN 533
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
Q TF+ L+ACS++ +V + + F M++++ I+P+ HY CL+D+ R G EEA I
Sbjct: 534 QTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALI 593
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+KM F+P + ++GCR H N+ LG +++LL L + Y ML +I+ A RW+
Sbjct: 594 EKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWD 653
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V ++ L R L +T +S + + V++F D HP EI+ L+ L + G
Sbjct: 654 KVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSG 713
Query: 669 YKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y S L D +E V HSE+LAIAFGLL TP S I + K+ +C DCH K
Sbjct: 714 YVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTK 773
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ + REIIVRD+ R H F NG C+C D+
Sbjct: 774 YISKIVKREIIVRDANRFHHFSNGECSCGDY 804
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/526 (27%), Positives = 262/526 (49%), Gaps = 21/526 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+++SLL+E + K+L + HA I+ D FV T LV Y ++E A+ VFD
Sbjct: 33 NFLSLLRE--SSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQF 90
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ + +++ GY+Q+ + + +F M + + AL AC+S +G
Sbjct: 91 FQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGM 150
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+I + V+ E + VG+S+ S G + A + F+ + K+V+ W ++IG + G
Sbjct: 151 EIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAG 210
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ F +M GI+P+ T+TS+ CG + +L++G +H + LG +++ V
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLT 270
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S + +Y K G ++ A+ +F M NLV+WNAMI+G ++ L E+ +
Sbjct: 271 SFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISG------CVRNGLVG-----ESFDL 319
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F +L S DL T S+L CS+ +L G+ +H +++ F S++++ TA+V++Y K
Sbjct: 320 FHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSK 378
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG +++A+ VF M R +I+WT+M+ G A + + AL+LF M G+ N VTFV
Sbjct: 379 CGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSL 438
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMDF 553
+ +C++ G + + +++ D + L+DM+ + G I A
Sbjct: 439 VHSCAHLGSLKRGRSIHGHL---FRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSI 495
Query: 554 EPNEVIWSVFIAGCRRHGN--MELGFYAAEQLLKLKPKDCESYAML 597
+ V+W+ I G HG+ +G Y LKP ++L
Sbjct: 496 SKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLL 541
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 202/395 (51%), Gaps = 14/395 (3%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ FQ + G K + SL+Q C +L + +H +++ G D V+T V
Sbjct: 214 VAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFV 273
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y K G++E A+ VF +P N+VSW ++ISG V+N + +F ++ +
Sbjct: 274 DMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLT 333
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ + L CS S+ GK +H ++ E + + ++ LYS CGSL A FNR+
Sbjct: 334 TIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNRM 392
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+++NV++WT ++ +NG A LR F++M EGI N T S+ C + SL+ G
Sbjct: 393 KDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGR 452
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD-GMSHVNLVTWNAMIAGHAQM 355
+H +LG+A ++ +++ +Y KCG ++ A+++F G ++V WN+MI G+
Sbjct: 453 SIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGM- 511
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H G +A+ I+ K+ G+KP+ TF S+L+ CS +EQG +
Sbjct: 512 ----------HGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSME 561
Query: 416 KTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEM 449
+ + + A LV++ + GR E A + +M
Sbjct: 562 RDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKM 596
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/602 (36%), Positives = 360/602 (59%), Gaps = 19/602 (3%)
Query: 159 AIHVFLDMLEAGNYPTNVTL-GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
+HV LD+++ G+ + TL T L C+ L ++ GK +H +V+ + D + NSL
Sbjct: 58 GLHV-LDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLL 116
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
+Y+ CGSL A + F+ + ++++SWT++I +N A L F +MLS+G +PNEF
Sbjct: 117 FMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEF 176
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
TL+S+ CG M S G Q+H+ K G SN+ V +S++ +Y +CG + EA +FD +
Sbjct: 177 TLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKL 236
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
N V+WNA+IAG+A+ + G EAL++F ++ G +P +T+S++L+
Sbjct: 237 GCKNEVSWNALIAGYARKGE-----------GEEALALFVRMQREGYRPTEFTYSALLSS 285
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
CS + LEQG+ +HA +K+ VG L++MY K G I A +VF ++ ++S
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSC 345
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
SM+ G+A H L +A Q F++M+ G+ PN +TF+ L ACS+A ++ E YF +M+K
Sbjct: 346 NSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK 405
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
Y I+P + HY ++D+ R G +++A FI++M EP IW + + H N E+G
Sbjct: 406 -YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGA 464
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
YAA+++ +L P ++ +L +I+ SAGRWEDVA V+ + ++ + + SW+ +++ V
Sbjct: 465 YAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSV 524
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLA 692
+ F ND HPQ +I K+ ++L +K K GY S L D++ + YHSEKLA
Sbjct: 525 HVFVANDVAHPQKEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLA 584
Query: 693 IAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
++F LLNTP S I ++K+ +C DCH+ IK ++ + REIIVRD+ R H F +G C+C
Sbjct: 585 LSFALLNTPPGSTIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCG 644
Query: 753 DF 754
D+
Sbjct: 645 DY 646
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 205/392 (52%), Gaps = 12/392 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y +LL+ C L +++H H++ + D + L+ +Y +CG++E A+++FD +P
Sbjct: 77 YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMP 136
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++VSWTS+I+GY QN + A+ +F ML G P TL + + C + S G+Q
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQ 196
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IHA KY + VG+SL +Y+ CG L A+ F+++ KN +SW +I GE
Sbjct: 197 IHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGE 256
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L F +M EG +P EFT +++ S C +M L G +H+ +K V N+
Sbjct: 257 GEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNT 316
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++++Y K G + +A+K+FD + V++V+ N+M+ G+AQ H G EA F
Sbjct: 317 LLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQ-----------HGLGKEAAQQF 365
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++P+ TF S+LT CS L++G+ L K V +V++ +
Sbjct: 366 DEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRA 425
Query: 437 GRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
G +++A EM ++ W +++ H
Sbjct: 426 GLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 205/414 (49%), Gaps = 42/414 (10%)
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV--IGACGENGEAVQGLR 262
Q E +SV SL + S C + +F R+ + + ++ + + + GL
Sbjct: 4 QCERSSSVLKSLLQIVSPC---KRDLGSFRRLWQHSESTFCVIDDRNLLRPSLNSKTGLH 60
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
+ ++P+ ++ C + L+ G VH + + +L ++NS++++Y
Sbjct: 61 VLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYA 120
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
+CG ++ A++LFD M H ++V+W +MI G+AQ ++ ++AL +F ++ S
Sbjct: 121 RCGSLEGARRLFDEMPHRDMVSWTSMITGYAQ-----------NDRASDALLLFPRMLSD 169
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G +P+ +T SS++ C + + G QIHA K G S+V VG++LV+MY +CG + A
Sbjct: 170 GAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEA 229
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
VF ++ + +SW ++I G+A +AL LF M G RP + T+ L++CS+
Sbjct: 230 MLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSM 289
Query: 503 GMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEV 558
G + + + +M+ K+ + + L+ M+ + G I +A FD + K+D V
Sbjct: 290 GCLEQGKWLHAHLMKSSQKLVGYVGN--TLLHMYAKSGSIRDAEKVFDKLVKVDV----V 343
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQL-----LKLKPKDCE--------SYAMLLD 599
+ + G +HG LG AA+Q ++P D S+A LLD
Sbjct: 344 SCNSMLIGYAQHG---LGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLD 394
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 149/288 (51%), Gaps = 1/288 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L++G + + SL++ C S + IHA K G H + FV + LV++Y +CG
Sbjct: 166 MLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGY 225
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ EA VFD L N VSW +LI+GY + + E A+ +F+ M G PT T L++
Sbjct: 226 LGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSS 285
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CSS+ + GK +HA+++K + VGN+L +Y+ GS+ A K F+++ + +V+S
Sbjct: 286 CSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSC 345
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+++ ++G + + F +M+ GI+PN+ T S+ + C L G L K
Sbjct: 346 NSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRK 405
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ +I+ L + GL+D+A+ + M + W A++
Sbjct: 406 YNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGA 453
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/731 (33%), Positives = 386/731 (52%), Gaps = 34/731 (4%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
V S+ Q S L + +S + +C + K L +HA +++TG D F +
Sbjct: 6 VPSISLQN-FSTLNNNLLFRNHQILSTIDKCSSSKQLKE---VHARMLRTGLFFDPFSAS 61
Query: 114 --FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE-AG 170
F + ++ A+ +FD +P+ N+ +W +LI Y +S P + +FLD+L+
Sbjct: 62 KLFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCE 121
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+ P T + A S L++ R+G +H +K D + NSL Y CG L+ A
Sbjct: 122 DLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAE 181
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F I K+V+SW ++I A + L F KM E + PN T+ + S C L
Sbjct: 182 RLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKL 241
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L G V S + G +L + N+++ +Y KCG VD+AQKLFD M ++ +W M+
Sbjct: 242 DLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLD 301
Query: 351 GHAQMMD----------LAKDDLSAHN----------GGTEALSIFSKLNSSGM-KPDLY 389
G+A+M D + +++A N EAL+IF++L S + KPD
Sbjct: 302 GYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEV 361
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T S L+ C++L A++ G IH + G + + + ++LV+MY KCG +E+A VF +
Sbjct: 362 TLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSV 421
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R + W++MI G H A+ LF +M A V+PN VTF L ACS+AG+V E
Sbjct: 422 EERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGR 481
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+F M+ Y + P M HY C++D+ R G +EEA + I +M P+ +W + C
Sbjct: 482 VFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSL 541
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H N+ELG A++QLLKL+P++ + +L +I+ GRWE V+ ++ L R+ +L + S
Sbjct: 542 HMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCS 601
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTDE----ESA 683
I V+ F D HP S+ I+ L+E+ K K GY+ +S +L +E E A
Sbjct: 602 SIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQA 661
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
HSEKLAIAFGL+ PI VVK+ +C DCH F K+++ + R+I++RD R H
Sbjct: 662 LSLHSEKLAIAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHH 721
Query: 744 FVNGHCTCRDF 754
F +GHC+C D+
Sbjct: 722 FRDGHCSCMDY 732
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/775 (31%), Positives = 411/775 (53%), Gaps = 97/775 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK----CGNMEEAQKVF 132
Y LLQ C + IHA VK G ++ L++ YG+ G + +A+++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 133 DNLP--RINVVSWTSLISGYVQNSQ-----------PEL--------------------A 159
D +P R NV +W SL+S + ++ + PE A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
I LDM G PT TL L++C+ ++ +G+++H++VVK V NS+ ++
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 220 YSTCGSLNSAIKAFNRIR-------------------------------EKNVMSWTTVI 248
Y CG +A F R+ +++++SW +I
Sbjct: 209 YGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMI 268
Query: 249 GACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+NG + L+ FS+ML E + P+EFT+TS+ S C + ++R+G QVH+ ++
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDL--AKD-- 361
A N +V N+++ Y K G V+ A+++ D + +N++++ A++ G+ ++ D+ A++
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 362 ------DLSA---------HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
D+ A NG EA+ +F + + G +P+ YT +++L++C+ L L+
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGF 464
G+QIH +++ V A++ MY + G A R+F ++ R I+WTSMI
Sbjct: 449 YGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 508
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H +A+ LFE+ML AGV P+++T+VG L+ACS+AG V E Y++ ++ E++I P
Sbjct: 509 AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 568
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
M HY C++D+ R G EA +FI++M EP+ + W ++ CR H N EL AAE+LL
Sbjct: 569 MSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL 628
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+ P + +Y+ + +++ + GRW D A + +E+ + + +SW I+ K++ F +D
Sbjct: 629 SIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYK---QQESFELTDE--ESASVYHSEKLAIAFGLLN 699
+HPQ ++ + + E+ K G+ Q ++ DE E HSEKLAIAFGL++
Sbjct: 689 VVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIS 748
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP + + V+K+ +C DCH IK I+ +T REIIVRD+ R H F +G C+C+D+
Sbjct: 749 TPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDY 803
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/540 (23%), Positives = 244/540 (45%), Gaps = 91/540 (16%)
Query: 55 RSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ F EA+ L +G + ++L C ++ + +H+ +VK G
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 111 VMTFLVNVYGKCGN-------------------------------MEEAQKVFDNLPRIN 139
V ++N+YGKCG+ M+ A+ +F+++P +
Sbjct: 201 VANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRS 260
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VSW ++I+GY QN A+ +F ML E+ P T+ + L+AC++L ++R+GKQ+H
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGS--------------------------------- 225
AY+++ + ++ V N+L S Y+ GS
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ SA + F + ++V++WT +I +NG + + F M++ G +PN +TL ++ SV
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
C ++ L G Q+H I+ + V N+I+ +Y + G A+++FD + +T
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
W +MI AQ H G EA+ +F ++ +G++PD T+ +L+ CS +
Sbjct: 501 WTSMIVALAQ-----------HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 405 EQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMIT 462
+G++ + + + ++ +V++ + G A M I+W S+++
Sbjct: 550 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 609
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
H + A E +L + PN GA +A +N VY A G + + +K +
Sbjct: 610 ACRVHKNAELAELAAEKLL--SIDPNN---SGAYSAIAN---VYSACGRWSDAARIWKAR 661
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 247/730 (33%), Positives = 396/730 (54%), Gaps = 27/730 (3%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQEC 84
L+ +KD VS+ S L++ E F+ + ++ G ++V LL
Sbjct: 174 LSLVKDGGDVVSWTTMLSSLVENGKWGE-----AFEIYVKMIESGVYPNEFTFVKLLGAV 228
Query: 85 VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWT 144
+ LS +++HAH++ G+ + + T +V++Y KC M +A KV + P +V WT
Sbjct: 229 SSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWT 288
Query: 145 SLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
+LISG+ QN Q AI VF DM +G P N T + L A SS+ S+ LG+Q H+ V+
Sbjct: 289 TLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIV 348
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNS-AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
EDD +GN+L +Y C + + A+K F I NVM WT++I E +
Sbjct: 349 GLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQL 407
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F++M + G++PN FT+++I C SL +H IK ++ V N+++ Y
Sbjct: 408 FAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAG 467
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
G++DEA + M+ + +T+ + A Q H+G AL + + + G
Sbjct: 468 VGMIDEAWSVIGTMNLRDSITYTCLAARLNQ---------KGHHG--MALKVLIHMCNDG 516
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
+K D ++ +S L+ + L +E G+Q+H ++K+GF V +LV++Y KCG I A+
Sbjct: 517 IKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDAN 576
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
R F ++S SW +I+GF+ + L AL F+DM LAGV+P+ +T + ++ACS+ G
Sbjct: 577 RAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGG 636
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
++ L YF MQKEY I P +DHYMCL+D+ R G +EEA I+KM F+P+ +I
Sbjct: 637 LLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTL 696
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
+ C HGN+ LG A + L+L P D Y +L +++ +AG + + L RE L
Sbjct: 697 LNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLR 756
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESA 683
+ W+ I+ +V+ F + ++ EI + L+ L+ + + Y+ QE+ +
Sbjct: 757 RSPGQCWMEIRSRVHHFSAGEKINED--EITEKLEFLITEFRNRRYQYQENED------- 807
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
YH E+LA+AFG+LN P SPI + K++ +C CH FI + T + REII+RD KR H
Sbjct: 808 KFYHPEQLAVAFGVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREIIMRDRKRFHF 867
Query: 744 FVNGHCTCRD 753
F +G C+CRD
Sbjct: 868 FKDGQCSCRD 877
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 256/494 (51%), Gaps = 25/494 (5%)
Query: 86 NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
N SL IH+ I+K G D ++ L+++Y K + A+ +FD +P +VVSWT+
Sbjct: 26 NSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTT 85
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
++S + + A+ +F M+ +G YP TL +AL +C +L G QIH VK
Sbjct: 86 ILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLG 145
Query: 206 TEDDTSVGNSLCSLYSTCGSLN-SAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRF 263
E + VG SL Y+ CG + A K + +++ +V+SWTT++ + ENG+ +
Sbjct: 146 LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEI 205
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+ KM+ G+ PNEFT + + L L G +H+ I G NL ++ +++ +Y K
Sbjct: 206 YVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYSK 265
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
C + +A K+ + ++ W +I+G Q + + EA+S+F + SG
Sbjct: 266 CRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQV-----------REAISVFRDMELSG 314
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI-ERA 442
+ P+ +T+SS+L S +++L+ GEQ H+ + G D+ +G ALV+MY KC I A
Sbjct: 315 LLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNA 374
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+VF E+++ ++ WTS+I GFA L + QLF +M AGVRPN T L ACS
Sbjct: 375 VKVFREITSPNVMCWTSLIAGFAEKRLE-DSFQLFAEMQAAGVRPNSFTMSAILGACSKT 433
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
+ MM + IK +D + L+D + +G I+EA+ I M+ + +
Sbjct: 434 RSLVPT-----MMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLR-DSI 487
Query: 559 IWSVFIAGCRRHGN 572
++ A + G+
Sbjct: 488 TYTCLAARLNQKGH 501
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/570 (26%), Positives = 262/570 (45%), Gaps = 52/570 (9%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME-EAQKVFDNLPR 137
S L+ C IH VK G + FV T LV Y KCG EA K+ +
Sbjct: 120 SALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKD 179
Query: 138 -INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+VVSWT+++S V+N + A +++ M+E+G YP T L A SS + GK
Sbjct: 180 GGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKL 239
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+HA+++ + E + + ++ +YS C + AIK N E +V WTT+I +N +
Sbjct: 240 LHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQ 299
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ + F M G+ PN FT +S+ + ++LSL +G Q HS I +G +L + N+
Sbjct: 300 VREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNA 359
Query: 317 IMYLYLKCG-LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y+KC + A K+F ++ N++ W ++IAG A+ ++ +
Sbjct: 360 LVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAE------------KRLEDSFQL 407
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F+++ ++G++P+ +T S+IL CS+ +L +H +KT D+ V ALV+ Y
Sbjct: 408 FAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAG 467
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
G I+ A V M+ R I++T + AL++ M G++ ++ +
Sbjct: 468 VGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASF 527
Query: 496 LAACSNAGM----------------------------VYEALGYFEMMQKEYK--IKPVM 525
L+A + G +Y G + +K +P
Sbjct: 528 LSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDA 587
Query: 526 DHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYA 579
+ LI F G I A FD ++ +P+ + I+ C G +ELG F++
Sbjct: 588 FSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHS 647
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++ + PK + Y L+D+ GR E+
Sbjct: 648 MQKEYHITPK-LDHYMCLVDLLGRGGRLEE 676
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/681 (34%), Positives = 373/681 (54%), Gaps = 25/681 (3%)
Query: 87 RKSLSNAEI--IHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
R + SNA +HA ++ G F LV+ Y + G + EA KVFD + +V +W
Sbjct: 78 RAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAW 137
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
+++SG +N++ A+ +F M+ G VT+ + L C L L +H Y VK
Sbjct: 138 NAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVK 197
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ + + V N+L +Y G L A F+ + +++++W ++I C + G+ L+
Sbjct: 198 HGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKM 257
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYL 322
F M G+ P+ TL S++S R +H ++ G+ ++ N+I+ +Y
Sbjct: 258 FQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYA 317
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS 381
K ++ AQ++FD M + V+WN +I G+ Q NG EA+ + +
Sbjct: 318 KLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQ------------NGLANEAVERYGHMQK 365
Query: 382 -SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G+K TF S+L S L AL+QG ++HAL++K G DV VGT L+++Y KCG++
Sbjct: 366 HEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLA 425
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A +F +M R+ W ++I+G H +AL LF M G++P+ VTFV LAACS
Sbjct: 426 EAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACS 485
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+AG+V + +F++MQ Y I P+ HY C+ DM R G ++EAF+FI+ M +P+ +W
Sbjct: 486 HAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVW 545
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ CR HGN+E+G A++ L +L P++ Y ++ +++ G+W+ V V++L R +
Sbjct: 546 GALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQ 605
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGL--HPQSAEIFKVLDELVEKAKCFGYKQQESF--- 675
L +T WS I +K V F + HPQ EI L L+ K + GY SF
Sbjct: 606 NLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYVSDYSFVLQ 665
Query: 676 ELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
++ D+E + HSE+LAIAFG++NTP +P+ + K+ +C DCHN K I+ +T REI
Sbjct: 666 DVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYISQITEREI 725
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
IVRDS R H F +GHC+C DF
Sbjct: 726 IVRDSNRFHHFKDGHCSCGDF 746
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 183/346 (52%), Gaps = 13/346 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG T + S+L CV A ++H + VK G ++ FV L++VYGK G
Sbjct: 160 MVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGM 219
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+EEAQ VF + ++V+W S+ISG Q Q A+ +F M +G P +TL + +A
Sbjct: 220 LEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASA 279
Query: 185 CSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+ R K +H YV++ + DD GN++ +Y+ ++ +A + F+ + ++ +S
Sbjct: 280 IAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVS 339
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W T+I +NG A + + + M EG++ + T S+ + +L+ G ++H+L
Sbjct: 340 WNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALS 399
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IK+G ++ V ++ LY KCG + EA LF+ M + WNA+I+G
Sbjct: 400 IKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIISG----------- 448
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
L H G EAL++FS++ G+KPD TF S+L CS ++QG
Sbjct: 449 LGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR 494
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/678 (34%), Positives = 374/678 (55%), Gaps = 29/678 (4%)
Query: 91 SNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
++A +HA ++ G H + F LV+ Y + G + EA +VFD +P +V +W +++SG
Sbjct: 83 ASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSG 142
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+N++ A+ + M+ G VTL + L C L L +H Y VK+ +
Sbjct: 143 LCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGE 202
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V N+L +Y G L A F + +++++W ++I A + G+ + F M+
Sbjct: 203 LFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMME 262
Query: 270 EGIQPNEFTLTSISSV---CGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCG 325
G+ P+ TL S++S CG L + VH + G+ ++ N+++ +Y K
Sbjct: 263 SGVCPDVLTLVSLASAVAQCGDELGAK---SVHCYVRRRGWDVGDIIAGNAMVDMYAKMS 319
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL-NSSG 383
+D AQK+FD + ++V+WN +I G+ Q NG EA+ I++ + N G
Sbjct: 320 KIDAAQKVFDNLPDRDVVSWNTLITGYMQ------------NGLANEAIRIYNDMHNHEG 367
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
+KP TF S+L S L L+QG ++HAL++KTG DV V T L+++Y KCG++ A
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAM 427
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+F M R+ W ++I G H +AL LF M ++P+ VTFV LAACS+AG
Sbjct: 428 FLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAG 487
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+V + +F++MQ Y I P+ HY C++DM R G ++EAF+FI+ M +P+ +W
Sbjct: 488 LVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGAL 547
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
+ CR HGN+E+G A++ L +L P++ Y ++ +++ G+W+ V V++L R + L
Sbjct: 548 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQ 607
Query: 624 ETDDWSWIRIKDKVYSFKPNDGL--HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-- 679
+T WS + +K V F HPQ EI + L +L+ K K GY SF L D
Sbjct: 608 KTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDVE 667
Query: 680 ---EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+E HSE+LAIAFG++NTP +P+ + K+ +C DCH+ K I+ +T REIIVR
Sbjct: 668 EDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYISKITEREIIVR 727
Query: 737 DSKRLHKFVNGHCTCRDF 754
D+ R H F +GHC+C DF
Sbjct: 728 DANRFHHFKDGHCSCGDF 745
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/395 (30%), Positives = 200/395 (50%), Gaps = 22/395 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + S+L CV + A ++H + VK G + FV L++VYGK G
Sbjct: 159 MVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGM 218
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP---TNVTLGTA 181
+ EA VF + ++V+W S+IS Q + A+ +F M+E+G P T V+L +A
Sbjct: 219 LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278
Query: 182 LTACSSLESIRLG-KQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ C LG K +H YV + + D GN++ +Y+ +++A K F+ + ++
Sbjct: 279 VAQCGD----ELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDR 334
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+V+SW T+I +NG A + +R ++ M + EG++P + T S+ + L+ G ++
Sbjct: 335 DVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRM 394
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+L IK G ++ V ++ LY KCG + EA LF+ M + WNA+IAG
Sbjct: 395 HALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAG------- 447
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT- 417
L H G +ALS+FS++ +KPD TF S+L CS ++QG L
Sbjct: 448 ----LGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVY 503
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
G + T +V+M + G+++ A M +
Sbjct: 504 GIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIK 538
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/699 (33%), Positives = 390/699 (55%), Gaps = 29/699 (4%)
Query: 72 VQTSSYVSLLQECVN----RKSLSNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNME 126
V +YV LL + L +HAH+++ G ++ V LVN+Y KCG ++
Sbjct: 376 VNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAID 435
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+A +VF + + +SW ++I+ QN E A+ + M + P+N + L++C+
Sbjct: 436 KACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCA 495
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L + G+Q+H VK+ DTSV N+L +Y CG ++ + FN + +V+SW +
Sbjct: 496 GLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS 555
Query: 247 VIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
++G + + + ++ FS M+ G+ PN+ T + + + L +G Q+HS+ +K
Sbjct: 556 IMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKH 615
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V N++M Y K G VD ++LF MS + ++WN+MI+G+
Sbjct: 616 GVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYI----------- 664
Query: 365 AHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+NG EA+ + S D TFS +L C+ + ALE+G ++HA L++ SDV
Sbjct: 665 -YNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDV 723
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VV +ALV+MY KCGRI+ AS+VF MS + SW SMI+G+A H L +AL++FE+M +
Sbjct: 724 VVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQES 783
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G P+ VTFV L+ACS+AG+V L YFE+M+ +Y I P ++HY C+ID+ R G +++
Sbjct: 784 GESPDHVTFVSVLSACSHAGLVERGLDYFELME-DYGILPRIEHYSCVIDLLGRAGELDK 842
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGC---RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+++K+M +PN +IW + C + ++LG A+ LL+L+P++ +Y +
Sbjct: 843 IQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKF 902
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ GRWED A + + + + SW+ + D V++F D HP + EI++ L+ L
Sbjct: 903 HAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFL 962
Query: 661 VEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
++K + GY + L D E + YHSEKLA+AF L + PI ++K+ +C
Sbjct: 963 IQKIRNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVC 1022
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH + I+ + R+II+RDS R H F +G C+C D+
Sbjct: 1023 GDCHTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDY 1061
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 247/493 (50%), Gaps = 27/493 (5%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
SL + + ++K+G D +V + LV+ + + G ++EA+ ++ L N V+ LI+
Sbjct: 293 SLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIA 352
Query: 149 GYVQNSQPELAIHVFLDMLEAG--NYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKY- 204
G V+ E A +F+ ++ N T V L +A+ S+ E +R G+++HA+V++
Sbjct: 353 GLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAG 412
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+V N L ++Y+ CG+++ A + F + ++ +SW T+I A +NG + +
Sbjct: 413 HIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNY 472
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
M I P+ F S S C + L G Q+H +K G + V N+++ +Y +C
Sbjct: 473 CLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGEC 532
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
G + E ++F+ MS ++V+WN+++ A S+ TE++ +FS + SG+
Sbjct: 533 GRMSECWEIFNSMSAHDVVSWNSIMGVMA----------SSQAPITESVQVFSNMMKSGL 582
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
P+ TF + L + L LE G+QIH++ LK G D V AL++ Y K G ++ R
Sbjct: 583 VPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCER 642
Query: 445 VFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA- 502
+F MS R ISW SMI+G+ + +A+ M+ + + TF L AC++
Sbjct: 643 LFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVA 702
Query: 503 ----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
GM A G ++ + ++ L+DM+ + G I+ A M + NE
Sbjct: 703 ALERGMEMHAFGLRSHLESDVVVESA------LVDMYSKCGRIDYASKVFHSMS-QKNEF 755
Query: 559 IWSVFIAGCRRHG 571
W+ I+G RHG
Sbjct: 756 SWNSMISGYARHG 768
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 215/430 (50%), Gaps = 26/430 (6%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
++ E +H +VK G D F+ LVN Y K ++ A++VFD +P N VSWT LISG+
Sbjct: 82 ASPESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGH 141
Query: 151 VQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSSLESIRLG--KQIHAYVVKYQT 206
V + PE A +F ML G PT+ T G+ L AC RLG Q+H V K +
Sbjct: 142 VLSGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEF 201
Query: 207 EDDTSVGNSLCSLYSTC--GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+T+V N+L S+Y +C G A + F+ +++++W ++ + G+A+ F
Sbjct: 202 TSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLF 261
Query: 265 SKMLSEG----IQPNEFTLTS-ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
M + ++P E T S I++ + SL + Q+ +K G +S+L V ++++
Sbjct: 262 RAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVS 321
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF-SK 378
+ + G++DEA+ ++ G+ N VT N +IAG L G A IF
Sbjct: 322 AFARHGMLDEAKDIYLGLKERNAVTLNGLIAG-----------LVKQQHGEAAAEIFMGA 370
Query: 379 LNSSGMKPDLYT--FSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKK 435
+S+ + D Y S+I + L +G ++HA L+ G + + V LVNMY K
Sbjct: 371 RDSAAVNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAK 430
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG I++A RVF M R ISW ++IT + A+ + M + P+ +
Sbjct: 431 CGAIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISG 490
Query: 496 LAACSNAGMV 505
L++C+ G++
Sbjct: 491 LSSCAGLGLL 500
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/699 (34%), Positives = 396/699 (56%), Gaps = 30/699 (4%)
Query: 72 VQTSSYVSLL----QECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNME 126
V +YV LL + ++ + L ++H H+++TG + V LVN+Y KCG +E
Sbjct: 373 VNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIE 432
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A K+F + + +SW ++IS QN E A+ + M ++ P+N L ++L++C+
Sbjct: 433 SASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCA 492
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L+ + G+Q+H VK+ + DTSV N L +Y CG+++ K FN + E + +SW T
Sbjct: 493 GLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNT 552
Query: 247 VIGACGENGEAVQGL-RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
++G + + + + F+ M+ G+ PN+ T ++ + + L +G QVH+ +K
Sbjct: 553 MMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKH 612
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V N+++ Y K G + + LF MS + ++WN+MI+G+
Sbjct: 613 GVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYI----------- 661
Query: 365 AHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+NG EA+ + SG D TFS IL C+ + ALE+G ++HA +++ SDV
Sbjct: 662 -YNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDV 720
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VV +ALV+MY KCGR++ AS++F M+ R SW SMI+G+A H L +A+++FE+ML +
Sbjct: 721 VVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRS 780
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
P+ VTFV L+ACS+AG+V L YFEMM ++ I P ++HY C+ID+ R G I++
Sbjct: 781 RESPDHVTFVSVLSACSHAGLVERGLEYFEMM-PDHGILPQIEHYSCVIDLLGRAGKIDK 839
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRH---GNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++I++M EPN +IW + CR+ N++LG A+ LL+++P++ +Y + +
Sbjct: 840 IKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNF 899
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ G WED A + R+ + SW+ + D V++F D HP + EI++ L+ L
Sbjct: 900 HAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFL 959
Query: 661 VEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
++ + GY + L D E + YHSEKLAIAF +L PI ++K+ +C
Sbjct: 960 IQNIRNAGYVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVC 1018
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH + I+ + +R+II+RDS R H F +G C+C D+
Sbjct: 1019 GDCHIAFRYISQMISRQIILRDSIRFHHFKDGKCSCGDY 1057
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 209/427 (48%), Gaps = 29/427 (6%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
++ E +H ++K G + D F+ LVN Y K + A +VFD +P N VSWT L+SGY
Sbjct: 78 NSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGY 137
Query: 151 VQNSQPELAIHVFLDML---EAGNYPTNVTLGTALTACSSLESIRLG--KQIHAYVVKYQ 205
V + E A VF ML +AG PT+ T GT L AC RLG Q+H V K +
Sbjct: 138 VLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTE 197
Query: 206 TEDDTSVGNSLCSLYSTC--GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+T+V N+L S+Y +C G A + F+ +++++W ++ + G+
Sbjct: 198 YASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTL 257
Query: 264 FSKMLSEG----IQPNEFTLTS-ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
F M ++P E T S I++ + S V QV +K G +S+L V ++++
Sbjct: 258 FKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALV 317
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF-S 377
+ + GL DEA+ +F + N VT N +I G L + D S EA+ IF
Sbjct: 318 SAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVG------LVRQDFS-----EEAVKIFVG 366
Query: 378 KLNSSGMKPDLYT--FSSILTICSRLVALEQGEQIHALTLKTGFLSD--VVVGTALVNMY 433
N+ + D Y S++ L G +H L+TG L+D + V LVNMY
Sbjct: 367 TRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTG-LTDLKIAVSNGLVNMY 425
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE AS++F M ISW ++I+ + +A+ + M + + P+ +
Sbjct: 426 AKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALI 485
Query: 494 GALAACS 500
+L++C+
Sbjct: 486 SSLSSCA 492
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 119/257 (46%), Gaps = 17/257 (6%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALS----VLTEGPKVQTSSYVSL 80
+ D+ +S+ S I NGN QEA+ ++ G + ++ +
Sbjct: 641 FTNMSDRRDAISWNSMISGYI-YNGN--------LQEAMDCVWLMIHSGQIMDCCTFSII 691
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L C + +L +HA +++ D V + LV++Y KCG ++ A K+F+++ + N
Sbjct: 692 LNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNE 751
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
SW S+ISGY ++ AI +F +ML + P +VT + L+ACS + G +
Sbjct: 752 FSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEM 811
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC--GENGEA 257
+ + + + L G ++ + R+ E N + W TV+ AC ++G
Sbjct: 812 MPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSN 871
Query: 258 VQGLRFFSKMLSEGIQP 274
+ R S++L E I+P
Sbjct: 872 IDLGREASRVLLE-IEP 887
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
E +H +K G D+ + LVN Y K R+ AS+VF EM R +SWT +++G+ H
Sbjct: 81 ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140
Query: 468 SLSHQALQLFEDMLL---AGVRPNQVTFVGALAACSNAG 503
++ +A ++F ML AG RP TF L AC + G
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGG 179
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 229/693 (33%), Positives = 377/693 (54%), Gaps = 22/693 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V++L C + + +H VK G +++ V L+++Y KC + EAQ
Sbjct: 202 PDVAT--LVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQ 259
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACSS 187
+FD + N+VSW S+I GY + ++ M +A T+ L C
Sbjct: 260 LLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLE 319
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ K++H Y ++ + + V N+ + Y+ CG+L S+ + F+ + K V SW +
Sbjct: 320 RSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNAL 379
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ +N + + L + +M G+ P+ FT+ S+ C M SL G ++H ++ G
Sbjct: 380 LCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGL 439
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
A + + S++ LY+ CG AQ LFDGM H +LV+WN MIAG++Q N
Sbjct: 440 AVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQ------------N 487
Query: 368 G-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EA+++F ++ S G++P + CS+L AL G+++H LK D+ V
Sbjct: 488 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 547
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+++++MY K G I + R+F + + + SW +I G+ H +AL+LFE ML G++
Sbjct: 548 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 607
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ TF G L ACS+AG+V + L YF M + I+P ++HY C++DM R G I++A
Sbjct: 608 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 667
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
I++M +P+ IWS ++ CR HGN+ LG A +LL+L+P+ E+Y ++ ++F +G+
Sbjct: 668 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK 727
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W+DV V+ ++ L + SWI + KV++F D + P+ E+ + L K
Sbjct: 728 WDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISS 787
Query: 667 FGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY +L +E+ + HSEKLAI+FGLLNT P+ V K+ +C DCHN
Sbjct: 788 IGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNA 847
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + R+I+VRD+KR H F +G C+C D+
Sbjct: 848 AKFISKVVNRDIVVRDNKRFHHFRDGICSCGDY 880
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 252/503 (50%), Gaps = 29/503 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ C RK + +H + T DF + T ++ +Y CG+ +++ VFD L R
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W +++S Y +N E A+ +F +++ + P N TL + AC+ L + LG+ I
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H K D VGN+L ++Y CG + A+K F + E+N++SW ++I ENG
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183
Query: 258 VQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ F +ML E P+ TL ++ VC + G VH L +KLG L V N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ +Y KC + EAQ LFD N+V+WN+MI G+A+ D+ + TE
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTE---- 299
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
+ MK D +T ++L +C L+ +++H + + G S+ +V A + Y +
Sbjct: 300 -----DAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTR 354
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG + + RVF M T+T+ SW +++ G+A +S +AL L+ M +G+ P+ T
Sbjct: 355 CGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 414
Query: 496 LAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
L ACS ++ E G+ ++ + P + + L+ +++ G F ++
Sbjct: 415 LLACSRMKSLHYGEEIHGF--ALRNGLAVDPFIG--ISLLSLYICCG-----KPFAAQVL 465
Query: 553 FEPNE----VIWSVFIAGCRRHG 571
F+ E V W+V IAG ++G
Sbjct: 466 FDGMEHRSLVSWNVMIAGYSQNG 488
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/409 (29%), Positives = 213/409 (52%), Gaps = 21/409 (5%)
Query: 67 TEGPKVQTSSY--VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
TE K++ + +++L C+ R L + + +H + + G + V + Y +CG
Sbjct: 298 TEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGA 357
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +++VFD + V SW +L+ GY QNS P A+ ++L M ++G P T+G+ L A
Sbjct: 358 LCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 417
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS ++S+ G++IH + ++ D +G SL SLY CG +A F+ + ++++SW
Sbjct: 418 CSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSW 477
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +NG + + F +MLS+GIQP E + + C + +LR+G ++H +K
Sbjct: 478 NVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK 537
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
++ V +SI+ +Y K G + +Q++FD + ++ +WN +IAG+
Sbjct: 538 AHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYG----------- 586
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDV 423
H G EAL +F K+ G+KPD +TF+ IL CS +E G E + + +
Sbjct: 587 IHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKL 646
Query: 424 VVGTALVNMYKKCGRIERASRVFVEM----STRTLISWTSMITGFANHS 468
T +V+M + GRI+ A R+ EM +R W+S+++ H
Sbjct: 647 EHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRI---WSSLLSSCRIHG 692
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 170/329 (51%), Gaps = 19/329 (5%)
Query: 178 LGTALTACSSLESIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+G L AC + I +G+++H V Q +D + + ++YS CGS + + F+++
Sbjct: 1 MGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL 60
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVG 295
R KN+ W ++ A N + FS+++S +P+ FTL + C +L L +G
Sbjct: 61 RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG 120
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+H + K+ S++ V N+++ +Y KCGLV+EA K+F+ M NLV+WN++I G ++
Sbjct: 121 QIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSE- 179
Query: 356 MDLAKDDLSAHNGG-TEALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
NG E+ + F ++ PD+ T ++L +C+ +E+G +H
Sbjct: 180 -----------NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHG 228
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L +K G +++V +L++MY KC + A +F + + ++SW SMI G+A +
Sbjct: 229 LAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCR 288
Query: 473 ALQLFEDMLL--AGVRPNQVTFVGALAAC 499
L + M A ++ ++ T + L C
Sbjct: 289 TFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 27/307 (8%)
Query: 286 CGTMLSLRVGAQVHSL-GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
CG + VG ++H + + ++ + I+ +Y CG +++ +FD + NL
Sbjct: 8 CGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQ 67
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVA 403
WNA+++ + + +L +D A+SIFS+L S + KPD +T ++ C+ L+
Sbjct: 68 WNAIVSAYTRN-ELFED----------AMSIFSELISVTEHKPDNFTLPCVIKACAGLLD 116
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L G+ IH + K +SDV VG AL+ MY KCG +E A +VF M R L+SW S+I G
Sbjct: 117 LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICG 176
Query: 464 FANHSLSHQALQLFEDMLLA--GVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQ 516
F+ + ++ F +ML+ P+ T V L C+ GM L +
Sbjct: 177 FSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLN 236
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+E + LIDM+ + + EA K D + N V W+ I G R ++
Sbjct: 237 EELMVNN------SLIDMYSKCRFLSEAQLLFDKND-KKNIVSWNSMIGGYAREEDVCRT 289
Query: 577 FYAAEQL 583
FY +++
Sbjct: 290 FYLLQKM 296
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 107/224 (47%), Gaps = 11/224 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L++G + + + + C +L + +H +K +D FV + ++++Y K G
Sbjct: 500 MLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGC 559
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +Q++FD L +V SW +I+GY + + + A+ +F ML G P + T L A
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 619
Query: 185 CSSLESIRLG-----KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-E 238
CS + G + ++ + ++ + E T V + L G ++ A++ + +
Sbjct: 620 CSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML----GRAGRIDDALRLIEEMPGD 675
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+ W++++ +C +G G + +K+L E +P + L S
Sbjct: 676 PDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLIS 719
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 237/706 (33%), Positives = 388/706 (54%), Gaps = 19/706 (2%)
Query: 57 LGF-QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
+GF +EAL + L G + ++ +L+ C +HAH+++ G + V
Sbjct: 175 VGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDV 234
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+ LV +Y KCG++ A+KVFD + + +SW ++I+G+ +N + E + +FL MLE
Sbjct: 235 LNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEV 294
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P +T+ + A L + K++H + VK D + NSL +Y++ G + A K
Sbjct: 295 QPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGK 354
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+R+ K+ MSWT +I +NG + L ++ M + P++ T+ S + C +
Sbjct: 355 IFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGR 414
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L VG ++H L G+ + V N+++ +Y K +D+A ++F M+ ++V+W++MIAG
Sbjct: 415 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 474
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
++ EAL F + +KP+ TF + L+ C+ AL G++IH
Sbjct: 475 -----------FCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIH 522
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A L+ G S+ V AL+++Y KCG+ A F S + ++SW M++GF H L
Sbjct: 523 AYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGD 582
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
AL LF M+ G P++VTFV L ACS AGMV + F MM +++ I P + HY C+
Sbjct: 583 IALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACM 642
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ R+G + EA++ I +M +P+ +W + GCR H ++ELG AA+ +L+L+P D
Sbjct: 643 VDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 702
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+ +L D++ AG+W VA V+ RE+ L + + SW+ +K ++F +D HPQ
Sbjct: 703 AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIK 762
Query: 652 EIFKVLDELVEKAKCFGYKQQESFELTD--EESASVYHSEKLAIAFGLLNTPIVSPILVV 709
EI VL + E+ K G+ ES E + E+ HSE+LA+AFGL+NT + I V
Sbjct: 763 EINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISVT 822
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
K+ C+ CH K I+ + REI VRD+K+LH F +G C+C D G
Sbjct: 823 KNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGDIG 868
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 269/532 (50%), Gaps = 25/532 (4%)
Query: 61 EALSVLTEGPKV-QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVN 117
+AL +L P+ +YV+L + C R+++ + A H F + +++
Sbjct: 82 QALWLLESSPEPPDEGAYVALFRLCEWRRAVDAG--MRACARADAEHPSFGLRLGNAMLS 139
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+ + G + A +VF +P +V SW ++ GY + E A+ ++ ML AG P T
Sbjct: 140 MLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYT 199
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L C + R+G+++HA+V+++ D+ V N+L ++Y+ CG + +A K F+ +
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ +SW +I EN E GL F ML +QPN T+TS++ G + + +
Sbjct: 260 VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H +K G+A ++ NS++ +Y G + +A K+F M + ++W AMI+G+ +
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK--- 376
Query: 358 LAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
NG +AL +++ + + PD T +S L C+ L L+ G ++H L
Sbjct: 377 ---------NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQN 427
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF+ VVV AL+ MY K I++A VF M+ + ++SW+SMI GF + S +AL
Sbjct: 428 KGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYY 487
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDM 534
F M L V+PN VTF+ AL+AC+ G + E+ + + Y+ L+D+
Sbjct: 488 FRYM-LGHVKPNSVTFIAALSACAATGALRSGK---EIHAYVLRCGIGSEGYVPNALLDL 543
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+V+ G A+ + E + V W++ ++G HG ++ Q++++
Sbjct: 544 YVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEM 594
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 235/666 (35%), Positives = 369/666 (55%), Gaps = 20/666 (3%)
Query: 96 IHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+H +K G H + V L++ Y K G + A++VF +P + V++ +++ G +
Sbjct: 161 LHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDSVTYNAMMMGCSKEG 220
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
A+ +F M G T T T LT + + + LG+Q+H V + T + V N
Sbjct: 221 SHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVAR-ATSSNVFVNN 279
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
SL YS C L+ K F+ + E++ +S+ +I N A LR F +M S
Sbjct: 280 SLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDR 339
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
S+ SV G++ + +G Q+H+ + LG +S V N+++ +Y KCG++D A+ F
Sbjct: 340 QALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNF 399
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
+ V+W AMI G Q NG E AL +F + +G+ PD TFSS
Sbjct: 400 INKNDKTGVSWTAMITGCVQ------------NGQQEEALQLFCGMRRAGLSPDRATFSS 447
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+ S L + G Q+H+ +++G +S V G+AL++MY KCG ++ A + F EM R
Sbjct: 448 TIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERN 507
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
ISW ++I+ +A++ + A+++FE ML G +P+ VTF+ L+ACS+ G+ E + YFE
Sbjct: 508 SISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFE 567
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+M+ EY I P +HY C+ID R+G ++ + + +M FE + +IWS + CR HGN
Sbjct: 568 LMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQ 627
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+L AAE+L + D Y +L +IF AG+WED A VK + R+ L + +SW+ +
Sbjct: 628 DLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEV 687
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEE---SASVYHS 688
K KVYSF ND +P EI L+ L ++ GYK S L D++ + YHS
Sbjct: 688 KHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQVDDDIKLESLKYHS 747
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
E+LAIAF L+NTP +PI V+K+ + C DCH+ IK+++ + R+IIVRDS R H F +G
Sbjct: 748 ERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDIIVRDSSRFHHFKDGF 807
Query: 749 CTCRDF 754
C+C D+
Sbjct: 808 CSCGDY 813
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/529 (26%), Positives = 243/529 (45%), Gaps = 54/529 (10%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNS 154
+ A +VKTG + + L++ G + +A+ +FD +P R N S ++SGY ++
Sbjct: 21 LDARMVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSG 80
Query: 155 QPELAIHVFL-----------------------------------DMLEAGNYPTNVTLG 179
Q A H+FL DML G P VT+
Sbjct: 81 QLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVA 140
Query: 180 TALT---ACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T L A + + +H + +K + V N+L Y G L +A + F
Sbjct: 141 TVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGLLAAARRVFQE 200
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++ +++ ++ C + G + L F+ M +G+ FT +++ +V + L +G
Sbjct: 201 MPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLG 260
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
QVH L + +SN+ V NS++ Y KC +DE +KLF M + V++N MIAG+A
Sbjct: 261 RQVHGL-VARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAW- 318
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ + L +F ++ S ++S+L++ + + G+QIHA +
Sbjct: 319 ----------NRCASIVLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLV 368
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
G S+ +VG AL++MY KCG ++ A F+ + +T +SWT+MITG + +ALQ
Sbjct: 369 LLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQ 428
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF M AG+ P++ TF + A SN M+ + + + V L+DM+
Sbjct: 429 LFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGS-ALLDMY 487
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+ GC++EA +M E N + W+ I+ +G + E +L
Sbjct: 488 TKCGCLDEALQTFDEMP-ERNSISWNAVISAYAHYGQAKNAIKMFEGML 535
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 114/214 (53%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
Q Y SLL + + + IHA +V G + V L+++Y KCG ++ A+ F
Sbjct: 340 QALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNF 399
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
N VSWT++I+G VQN Q E A+ +F M AG P T + + A S+L I
Sbjct: 400 INKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIG 459
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LG+Q+H+Y+++ G++L +Y+ CG L+ A++ F+ + E+N +SW VI A
Sbjct: 460 LGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYA 519
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
G+A ++ F ML G +P+ T S+ S C
Sbjct: 520 HYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSAC 553
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 64/112 (57%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+++ S ++ N + +H++++++G F + L+++Y KCG ++EA + FD
Sbjct: 443 ATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDE 502
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+P N +SW ++IS Y Q + AI +F ML G P +VT + L+ACS
Sbjct: 503 MPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACS 554
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/775 (31%), Positives = 410/775 (52%), Gaps = 97/775 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK----CGNMEEAQKVF 132
Y LLQ C + IHA VK G ++ L++ YG+ G + +A+++F
Sbjct: 29 YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88
Query: 133 DNLP--RINVVSWTSLISGYVQNSQ-----------PEL--------------------A 159
D +P R NV +W SL+S + ++ + PE A
Sbjct: 89 DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
I LDM G PT TL L++C+ ++ +G+++H++VVK V NS+ ++
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNM 208
Query: 220 YSTCGSLNSAIKAFNRIREKNV-------------------------------MSWTTVI 248
Y CG +A F R+ ++V +SW +I
Sbjct: 209 YGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMI 268
Query: 249 GACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+NG + L+ FS+ML E + P+EFT+TS+ S C + ++R+G QVH+ ++
Sbjct: 269 AGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEM 328
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDL--AKD-- 361
A N +V N+++ Y K G V+ A+++ D + +N++++ A++ G+ ++ D+ A++
Sbjct: 329 AYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF 388
Query: 362 ------DLSA---------HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
D+ A NG EA+ +F + + G +P+ YT +++L++C+ L L+
Sbjct: 389 GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLD 448
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGF 464
G+QIH +++ V A++ MY + G A R+F ++ R I+WTSMI
Sbjct: 449 YGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVAL 508
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H +A+ LFE+ML AGV P+++T+VG L+ACS+AG V E Y++ ++ E++I P
Sbjct: 509 AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 568
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
M HY C++D+ R G EA +FI++M EP+ + W ++ CR H N EL AAE+LL
Sbjct: 569 MSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL 628
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+ P + +Y+ + +++ + GRW D A + +E+ + + +SW I+ K++ F +D
Sbjct: 629 SIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADD 688
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYK---QQESFELTDE--ESASVYHSEKLAIAFGLLN 699
+HPQ ++ + + E+ K G+ Q ++ DE E HSEKLAIAFGL++
Sbjct: 689 VVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLIS 748
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP + + V+K+ +C DCH IK I+ +T REIIVRD+ R H F +G C+C+D+
Sbjct: 749 TPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDY 803
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 246/540 (45%), Gaps = 91/540 (16%)
Query: 55 RSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ F EA+ L +G + ++L C ++ + +H+ +VK G
Sbjct: 141 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 200
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLP------------------RIN------------- 139
V ++N+YGKCG+ E A VF+ +P R++
Sbjct: 201 VANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRS 260
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VSW ++I+GY QN A+ +F ML E+ P T+ + L+AC++L ++R+GKQ+H
Sbjct: 261 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 320
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGS--------------------------------- 225
AY+++ + ++ V N+L S Y+ GS
Sbjct: 321 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ SA + F + ++V++WT +I +NG + + F M++ G +PN +TL ++ SV
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
C ++ L G Q+H I+ + V N+I+ +Y + G A+++FD + +T
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 500
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
W +MI AQ H G EA+ +F ++ +G++PD T+ +L+ CS +
Sbjct: 501 WTSMIVALAQ-----------HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 405 EQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMIT 462
+G++ + + + ++ +V++ + G A M I+W S+++
Sbjct: 550 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 609
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
H + A +L + LL+ + PN GA +A +N VY A G + + +K +
Sbjct: 610 ACRVHKNAELA-ELAAEKLLS-IDPNN---SGAYSAIAN---VYSACGRWSDAARIWKAR 661
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 372/667 (55%), Gaps = 21/667 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +VK G V L+ +Y G EEA VF +P +++SW SL++ +V + +
Sbjct: 384 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGR 443
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ + M+ G VT +AL AC S E G+ +H VV D+ +GN+
Sbjct: 444 SLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNA 503
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+Y G ++++ + ++ ++V++W +IG EN + + L F + EG+ N
Sbjct: 504 LVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSAN 563
Query: 276 EFTLTSISSVC---GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
T+ S+ S C G +L G +H+ + G+ S+ V+NS++ +Y KCG + +Q
Sbjct: 564 YITVVSVLSACLVPGDLLER--GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+G+ + +++TWNA++A +A H G E L + SK+ S G+ D ++FS
Sbjct: 622 LFNGLDNRSIITWNAILAANAH-----------HGHGEEVLKLVSKMRSFGLSLDQFSFS 670
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
L+ ++L LE+G+Q+H L +K GF D + A +MY KCG I ++ R
Sbjct: 671 EGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNR 730
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+L SW +I+ H + + F +ML G++P VTFV L ACS+ G+V + L Y+
Sbjct: 731 SLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYY 790
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+M+ K++ ++P ++H +C+ID+ R G + EA FI KM +PN+++W +A C+ H +
Sbjct: 791 DMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRD 850
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
++ G AAE L KL+P+D + + ++F + GRWEDV V+ + + + SW++
Sbjct: 851 LDRGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 910
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--KQQESFELTDEESAS---VYH 687
+KDKV SF D HPQ+ EI+ L+++ + K GY ++ + TDEE H
Sbjct: 911 LKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNH 970
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LA+A+ L++TP S + + K+ +C DCH+ K ++ + R I++RD R H F +G
Sbjct: 971 SERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESG 1030
Query: 748 HCTCRDF 754
C+C+D+
Sbjct: 1031 LCSCKDY 1037
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 267/533 (50%), Gaps = 23/533 (4%)
Query: 72 VQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
++ SS+V SL+ C S+ + +H + K+G D +V T ++++YG G + +
Sbjct: 155 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 214
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P NVVSWTSL+ GY +PE I ++ M G ++ +++C L
Sbjct: 215 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLL 274
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ LG+QI V+K E +V NSL S++ G+++ A FN+I E++ +SW +++
Sbjct: 275 KDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIV 334
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +NG + R F+ M + N T++++ SV G + + G +H L +K+G+
Sbjct: 335 AAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFD 394
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y G +EA +F M +L++WN+++A D S
Sbjct: 395 SVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMA------SFVNDGRS---- 444
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL I + +G + TF+S L C ++G +H L + +G + ++G A
Sbjct: 445 -LDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNA 503
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY K G + + RV ++M R +++W ++I G+A + +AL F+ + + GV N
Sbjct: 504 LVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSAN 563
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+T V L+AC G + E + LI M+ + G + + D
Sbjct: 564 YITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 623
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+D + + W+ +A HG+ E++LKL K S+ + LD F
Sbjct: 624 NGLD-NRSIITWNAILAANAHHGH-------GEEVLKLVSK-MRSFGLSLDQF 667
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 208/411 (50%), Gaps = 14/411 (3%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ +HA VK L+N+Y K G ++ A+ +FD +P N VSW +++SG
Sbjct: 75 TTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGI 134
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI-RLGKQIHAYVVKYQTEDD 209
V+ + F M + G P++ + + +TAC S+ R G Q+H +V K D
Sbjct: 135 VRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 194
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V ++ LY G ++ + K F + ++NV+SWT+++ + GE + + + M
Sbjct: 195 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRG 254
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
EG++ NE +++ + S CG + +G Q+ IK G S L V NS++ ++ G VD
Sbjct: 255 EGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDY 314
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS-IFSKLNSSGMKPDL 388
A +F+ +S + ++WN+++A +AQ NG E S IF+ + + +
Sbjct: 315 ANYIFNQISERDTISWNSIVAAYAQ------------NGHIEESSRIFNLMRRFHDEVNS 362
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T S++L++ + + G IH L +K GF S V V L+ MY GR E A VF +
Sbjct: 363 TTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQ 422
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
M T+ LISW S++ F N S AL + M+ G N VTF ALAAC
Sbjct: 423 MPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAAC 473
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 134/549 (24%), Positives = 254/549 (46%), Gaps = 40/549 (7%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ EG + +S ++ C K S I ++K+G V L++++G G
Sbjct: 251 SMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMG 310
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
N++ A +F+ + + +SW S+++ Y QN E + +F M + + T+ T L+
Sbjct: 311 NVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLS 370
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
++ + G+ IH VVK + V N+L +Y+ G A F ++ K+++S
Sbjct: 371 VLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLIS 430
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +++ + +G ++ L M+ G N T TS + C + G +H L +
Sbjct: 431 WNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVV 490
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
G N + N+++ +Y K G + ++++ M ++V WNA+I G+A+ D K
Sbjct: 491 VSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDK--- 547
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA---LEQGEQIHALTLKTGFL 420
AL+ F L G+ + T S+L+ C LV LE+G+ +HA + GF
Sbjct: 548 --------ALAAFQTLRVEGVSANYITVVSVLSAC--LVPGDLLERGKPLHAYIVSAGFE 597
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
SD V +L+ MY KCG + + +F + R++I+W +++ A+H + L+L M
Sbjct: 598 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKM 657
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRL 538
G+ +Q +F L+A + ++ E ++ K+ +D ++ DM+ +
Sbjct: 658 RSFGLSLDQFSFSEGLSAAAKLAVLEEGQ---QLHGLAVKLGFELDCFIFNAAADMYSKC 714
Query: 539 GCIEEAFDFIKKMDFEPNEVI--WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
G I E +K + N + W++ I+ RHG E + CE++
Sbjct: 715 GEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE--------------EVCETFHE 757
Query: 597 LLDIFVSAG 605
+L++ + G
Sbjct: 758 MLEMGIKPG 766
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 5/321 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQEC-VNRKSLSNAEIIHAHIVKTGSHQD 108
N +P ++L + L V EG + VS+L C V L + +HA+IV G D
Sbjct: 542 NEDPDKALAAFQTLRV--EGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESD 599
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KCG++ +Q +F+ L ++++W ++++ + E + + M
Sbjct: 600 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRS 659
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G + L+A + L + G+Q+H VK E D + N+ +YS CG +
Sbjct: 660 FGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGE 719
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
+K +++ SW +I A G +G + F +ML GI+P T S+ + C
Sbjct: 720 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSH 779
Query: 289 MLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWN 346
+ G + + K G + ++ L + G + EA+ M N + W
Sbjct: 780 GGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWR 839
Query: 347 AMIAGHAQMMDLAKDDLSAHN 367
+++A DL + +A N
Sbjct: 840 SLLASCKIHRDLDRGRKAAEN 860
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P+L F T S++ G +HAL +K V+ L+NMY K GR++ A +
Sbjct: 58 PELSCFDQ--TGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYL 115
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F +M R +SW +M++G L + ++ F+ M G++P+ + AC +G +
Sbjct: 116 FDKMPVRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSM 175
Query: 506 YE 507
+
Sbjct: 176 FR 177
>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic-like [Glycine max]
Length = 903
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/743 (33%), Positives = 404/743 (54%), Gaps = 33/743 (4%)
Query: 12 CTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPK 71
CT+E P LA +KD + VS+ S L++ + SE Q + ++ G
Sbjct: 167 CTVE-----PHKLLAFVKDGD-VVSWTTMISSLVETSKWSE-----ALQLYVKMIEAGIY 215
Query: 72 VQTSSYVSLL-QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++V LL +++H+ ++ G + + T ++ +Y KC ME+A K
Sbjct: 216 PNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIK 275
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
V P+ +V WTS+ISG+VQNSQ A++ +DM +G P N T + L A SS+ S
Sbjct: 276 VSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLS 335
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-SLNSAIKAFNRIREKNVMSWTTVIG 249
+ LG+Q H+ V+ E D VGN+L +Y C + + +KAF I NV+SWT++I
Sbjct: 336 LELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIA 395
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
E+G + ++ F++M + G+QPN FTL++I C M S+ ++H IK
Sbjct: 396 GFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDI 455
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V N+++ Y G+ DEA + M+H +++T+ + A Q D
Sbjct: 456 DMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGD-----------H 504
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
AL + + + + +K D ++ +S ++ + L +E G+Q+H + K+GF V +L
Sbjct: 505 EMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSL 564
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V+ Y KCG + A RVF +++ +SW +I+G A++ L AL F+DM LAGV+P+
Sbjct: 565 VHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDS 624
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VTF+ + ACS ++ + L YF M+K Y I P +DHY+CL+D+ R G +EEA I+
Sbjct: 625 VTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIE 684
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M F+P+ VI+ + C HGN+ LG A + L+L P D Y +L ++ +AG +
Sbjct: 685 TMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDF 744
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ L RE L + W+ +K K+Y F + + + EI + L+ L+ + K GY
Sbjct: 745 GDKTRKLMRERGLRRSPRQCWMEVKSKIYLFSAREKI--GNDEINEKLESLITEIKNRGY 802
Query: 670 KQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
QES + +YHSE+LA+AFG+L+ P ++PI + K++ +C CH+FI ++T
Sbjct: 803 PYQESED-------KLYHSEQLALAFGVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFV 855
Query: 730 AREIIVRDSKRLHKFVNGHCTCR 752
REIIVRD KR H F +G C+CR
Sbjct: 856 DREIIVRDRKRFHVFKDGQCSCR 878
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 254/500 (50%), Gaps = 27/500 (5%)
Query: 86 NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
N ++L +H+ I+K G D ++ L+ +Y KC + +A+ +FD +P +VVSWT+
Sbjct: 28 NSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPHRDVVSWTT 87
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
L+S + +N A+ +F ML +G P TL +AL +CS+L G +IHA VVK
Sbjct: 88 LLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLG 147
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
E + +G +L LY+ C K +++ +V+SWTT+I + E + + L+ +
Sbjct: 148 LELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYV 207
Query: 266 KMLSEGIQPNEFT---LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
KM+ GI PNEFT L + S G L G +HS I G NL ++ +I+ +Y
Sbjct: 208 KMIEAGIYPNEFTFVKLLGMPSFLG--LGKGYGKVLHSQLITFGVEMNLMLKTAIICMYA 265
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
KC +++A K+ ++ W ++I+G Q + EA++ + S
Sbjct: 266 KCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQV-----------REAVNALVDMELS 314
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR-IER 441
G+ P+ +T++S+L S +++LE GEQ H+ + G D+ VG ALV+MY KC
Sbjct: 315 GILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTN 374
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+ F ++ +ISWTS+I GFA H +++QLF +M AGV+PN T L ACS
Sbjct: 375 GVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSK 434
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
+ + Y IK +D M L+D + G +EA+ I M+ +
Sbjct: 435 MKSIIQTKKL-----HGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHR-DI 488
Query: 558 VIWSVFIAGCRRHGNMELGF 577
+ ++ A + G+ E+
Sbjct: 489 ITYTTLAARLNQQGDHEMAL 508
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 268/569 (47%), Gaps = 50/569 (8%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S L+ C IHA +VK G + + T LV++Y KC E K+ +
Sbjct: 122 SALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDG 181
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR-LGKQI 197
+VVSWT++IS V+ S+ A+ +++ M+EAG YP T L S L + GK +
Sbjct: 182 DVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVL 241
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H+ ++ + E + + ++ +Y+ C + AIK + + +V WT++I +N +
Sbjct: 242 HSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQV 301
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ + M GI PN FT S+ + ++LSL +G Q HS I +G ++ V N++
Sbjct: 302 REAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNAL 361
Query: 318 MYLYLKCG-LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+ +Y+KC K F G++ N+++W ++IAG A+ H E++ +F
Sbjct: 362 VDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAE-----------HGFEEESVQLF 410
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+++ ++G++P+ +T S+IL CS++ ++ Q +++H +KT D+ VG ALV+ Y
Sbjct: 411 AEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGG 470
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + A V M+ R +I++T++ AL++ M V+ ++ + +
Sbjct: 471 GMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFI 530
Query: 497 AACSNAGMV--------YEALGYFEM-----------------MQKEYKI-----KPVMD 526
+A + G++ Y FE M+ Y++ +P
Sbjct: 531 SAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRV 590
Query: 527 HYMCLIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAA 580
+ LI G I + AFD ++ +P+ V + I C + + G FY+
Sbjct: 591 SWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSM 650
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWED 609
E+ + PK + Y L+D+ GR E+
Sbjct: 651 EKTYHITPK-LDHYVCLVDLLGRGGRLEE 678
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/694 (34%), Positives = 387/694 (55%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++ S+L ++ + +HA VK G FV L+N+Y KCG +EE
Sbjct: 199 EGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEE 258
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + ++VSW +L++G V N A+ +F D + T T T + C++
Sbjct: 259 ARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCAN 318
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTT 246
++ + L +Q+H+ V+K +V +L YS G L +A+ F + +NV+SWT
Sbjct: 319 IKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTA 378
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I C +NG+ FS+M +G+ PN+FT ++I + L ++ AQV IK
Sbjct: 379 MINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASVASLPPQIHAQV----IKTN 434
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V +++ Y K +EA +F + ++V+W+AM+ +AQ D
Sbjct: 435 YECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGD--------S 486
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
+G T +IF K+ G+KP+ +T SS++ C+ A ++ G Q HA+++K + V
Sbjct: 487 DGAT---NIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCV 543
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+ALV+MY + G IE A +F + R L+SW SM++G+A H S +AL +F M G+
Sbjct: 544 SSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGI 603
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ VTF+ + C++AG+V E YF+ M ++Y I P M+HY C++D++ R G ++EA
Sbjct: 604 EMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAM 663
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I+ M F ++W + C+ H N+ELG AAE+LL L+P D +Y +L +I+ +AG
Sbjct: 664 SLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAG 723
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+W++ V+ L +K+ + SWI+IK+KV+SF +D HP S +I+ L + K K
Sbjct: 724 KWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLK 783
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY SF L + +E+ HSE+LA+AFGL+ TP +P+ + K+ +C DCH
Sbjct: 784 QEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVCGDCHT 843
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK+++ + REI++RD R H F +G C+C DF
Sbjct: 844 VIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDF 877
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 256/506 (50%), Gaps = 18/506 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNME 126
G +V + V +L+ C + + +H ++ G + D V T LV++Y K ++
Sbjct: 97 HGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVV 156
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+ +KVF+ +P+ NVV+WTSL++GY+Q+ + +F M G +P +VT + L+ +
Sbjct: 157 DGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVA 216
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
S + LG+++HA VK+ V NSL ++Y+ CG + A F + ++++SW T
Sbjct: 217 SQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNT 276
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ NG ++ L+ F S + T ++ +C + L + Q+HS +K G
Sbjct: 277 LMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRG 336
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ S V ++M Y K G + A +F MS N+V+W AMI G Q D+
Sbjct: 337 FHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPL----- 391
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
A ++FS++ G+ P+ +T+S+ILT + + +L QIHA +KT + +V
Sbjct: 392 ------AAALFSRMREDGVAPNDFTYSTILT--ASVASLP--PQIHAQVIKTNYECTSIV 441
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
GTAL+ Y K E A +F + + ++SW++M+T +A S A +F M + G+
Sbjct: 442 GTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGL 501
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+PN+ T + AC++ + F + +++ + L+ M+ R G IE A
Sbjct: 502 KPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESA- 560
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHG 571
I + + + V W+ ++G +HG
Sbjct: 561 QCIFERQTDRDLVSWNSMLSGYAQHG 586
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 250/767 (32%), Positives = 407/767 (53%), Gaps = 80/767 (10%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
R++G + +L G K + L+ C S +H I G + FV
Sbjct: 132 RAIGV--SCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNA 189
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRI---NVVSWTSLISGYVQNSQPELAIHVFLDML---- 167
LV +Y +CG++E+A VFD + R +V+SW S+++ +V+ S P A+ +F +M
Sbjct: 190 LVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVH 249
Query: 168 -EAGNYPTNV-TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
+A N +++ ++ L AC+SL+++ K+IH+Y ++ T D V N+L Y+ CGS
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGS 309
Query: 226 LNSAIKAFN-------------------------------RIREKN----VMSWTTVIGA 250
+N A+K FN +R++N V++W+ VI
Sbjct: 310 MNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAG 369
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS- 309
+ G + + L F +M+ +G +PN T+ S+ S C ++ +L G ++H+ +K S
Sbjct: 370 YAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSL 429
Query: 310 -----------NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMM 356
+L V N+++ +Y KC A+ +FD + N+VTW MI G+AQ
Sbjct: 430 DNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYG 489
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
D +AL IFS++ S + P+ YT S IL C+ L AL G+QIHA
Sbjct: 490 D-----------SNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYV 538
Query: 415 LKTGFLSDVV--VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+ V V L++MY KCG ++ A VF M R +SWTSM++G+ H +
Sbjct: 539 TRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKE 598
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
AL +F+ M AG P+ ++F+ L ACS++GMV + L YF++M+++Y + +HY C+I
Sbjct: 599 ALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVI 658
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
D+ R G +++A+ I++M EP+ VIW ++ CR H N+EL YA +L+ +K ++
Sbjct: 659 DLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDG 718
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
SY ++ +I+ +A RW+DVA ++ L ++ + + SW++ K SF D HP S E
Sbjct: 719 SYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPE 778
Query: 653 IFKVLDELVEKAKCFGYKQQESFEL---TDEESASVY--HSEKLAIAFGLLNTPIVSPIL 707
I+ +L+ L+ + K GY + +F L DEE ++ HSEKLA+A+GLL T PI
Sbjct: 779 IYSLLERLIGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIR 838
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ K+ +C DCH+ I+ + EIIVRDS R H F NG C+C +
Sbjct: 839 ITKNLRVCGDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGY 885
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 160/573 (27%), Positives = 269/573 (46%), Gaps = 74/573 (12%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-----------------SHQDFF- 110
G V + + SLL+EC +S++ IH I+ G SH
Sbjct: 26 GRDVSPTHFASLLKEC---RSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82
Query: 111 --VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+ T +V Y CG ++A V + + V W L+ +++ + AI V ML
Sbjct: 83 KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
AG P + TL AL AC L S G+ +H + E + V N+L ++YS CGSL
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLED 202
Query: 229 AIKAFNRIREK---NVMSWTTVIGACGENGEAVQGLRFFSK--MLSEGIQPNE----FTL 279
A F+ I K +V+SW +++ A + L FS+ M+ NE ++
Sbjct: 203 ASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISI 262
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+I C ++ +L ++HS I+ G ++ V N+++ Y KCG +++A K+F+ M
Sbjct: 263 VNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEF 322
Query: 340 VNLVTWNAMIAGHAQ----------MMDLAKDDLS-------------AHNGGT-EALSI 375
++V+WNAM+ G+ Q ++ K+++ A G + EAL
Sbjct: 323 KDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDA 382
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS------------DV 423
F ++ G +P+ T S+L+ C+ L AL QG +IHA +LK LS D+
Sbjct: 383 FQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDL 442
Query: 424 VVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V AL++MY KC + A +F + R +++WT MI G+A + S+ AL++F +M+
Sbjct: 443 MVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMI 502
Query: 482 LA--GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-CLIDMFVRL 538
V PN T L AC++ + + + ++ +P + CLIDM+ +
Sbjct: 503 SKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKC 562
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G ++ A + M + NEV W+ ++G HG
Sbjct: 563 GDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/750 (32%), Positives = 395/750 (52%), Gaps = 68/750 (9%)
Query: 59 FQEALSVLTEGPK--VQTSSYVSLLQECVNRKSLSNAEIIHA------------------ 98
+ A+ ++ + PK ++ +Y S+LQ C + KS+ + IH+
Sbjct: 84 LRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLV 143
Query: 99 -------------HIVKTGSHQDFFVMTFLVNVYGKCGN------------------MEE 127
I +++ F+ L+N Y K GN +E
Sbjct: 144 FMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVES 203
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+K+FD L +V+SW S+ISGYV N E + +F ML G T+ + + CS+
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSN 263
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ LG+ +H Y +K + ++ N L +YS G+LNSAI+ F + E++V+SWT++
Sbjct: 264 TGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSM 323
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I G + +R F +M EGI P+ FT+T+I C L G VH+ +
Sbjct: 324 IAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKM 383
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+L V N++M +Y KCG + +A +F M ++V+WN MI G++ K+ L
Sbjct: 384 QSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYS------KNSLP--- 434
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL++F ++ + KP+ T + IL C+ L ALE+G++IH L+ GF D V
Sbjct: 435 --NEALNLFVEMQYNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVAN 491
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV+MY KCG + A +F + + L+SWT MI G+ H +A+ F +M +G+ P
Sbjct: 492 ALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEP 551
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
++V+F+ L ACS++G++ E G+F MM+ I+P +HY C++D+ R G + +A+ F
Sbjct: 552 DEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKF 611
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
IK M EP+ IW + GCR + +++L AE + +L+P++ Y +L +I+ A +W
Sbjct: 612 IKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKW 671
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
E+V ++ L + SWI IK KV+ F D HP + +I +L + + K
Sbjct: 672 EEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEE 731
Query: 668 GYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
G+ + + L T++E A HSEK+A+AFG+L+ P + V K+ +C DCH
Sbjct: 732 GHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMA 791
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
K ++ + R+II+RDS R H F +G C+CR
Sbjct: 792 KFMSKMVKRDIILRDSNRFHHFKDGSCSCR 821
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 196/360 (54%), Gaps = 16/360 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG SE + L E + +L G ++ VS++ C N L +H + +K +
Sbjct: 229 NGLSE--KGLDLFEQMLLL--GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGK 284
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ + L+++Y K GN+ A +VF+ + +VVSWTS+I+GY + ++++ +F +M
Sbjct: 285 ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEME 344
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ G P T+ T L AC+ + GK +H Y+ + + + D V N+L +Y+ CGS+
Sbjct: 345 KEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMG 404
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F+ ++ K+++SW T+IG +N + L F +M +PN T+ I C
Sbjct: 405 DAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACA 463
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ +L G ++H ++ G++ + V N+++ +YLKCG + A+ LFD + +LV+W
Sbjct: 464 SLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTV 523
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MIAG+ H G+EA++ F+++ +SG++PD +F SIL CS L++G
Sbjct: 524 MIAGYGM-----------HGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEG 572
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 181/389 (46%), Gaps = 47/389 (12%)
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN-E 276
+LY +C ++ +++ I K + + I E G LR +++++ +P+ E
Sbjct: 46 NLYHSCATIGTSVLPSETIDCK-ITDYNIEICRFCELGN----LRRAMELINQSPKPDLE 100
Query: 277 F-TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T S+ +C + S++ G ++HS+ + + + ++++Y+ CG + E +++FD
Sbjct: 101 LRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFD 160
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAK-----------------------DDLS-------- 364
+++ + WN ++ G+A++ + + D+L
Sbjct: 161 KVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWN 220
Query: 365 ------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
NG +E L +F ++ G+ DL T S++ CS L G +H +K
Sbjct: 221 SMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA 280
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
F ++ + L++MY K G + A +VF M R+++SWTSMI G+A LS +++LF
Sbjct: 281 SFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 340
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
+M G+ P+ T L AC+ G++ + KE K++ + L+DM+ +
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYI-KENKMQSDLFVSNALMDMYAK 399
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
G + +A +M + + V W+ I G
Sbjct: 400 CGSMGDAHSVFSEMQVK-DIVSWNTMIGG 427
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/683 (35%), Positives = 363/683 (53%), Gaps = 19/683 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LL+ ++ S+ ++HA IVKT S F+ +L+N+Y K + E A+ V P
Sbjct: 12 LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVVSWTSL+SG QN A+ F +M G P + T A +SL GKQIH
Sbjct: 72 NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH 131
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
A VK D VG S +Y + A K F+ I E+N+ +W I +G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPK 191
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F + G QPN T + C L L +G Q+H L + G+ +++ V N ++
Sbjct: 192 EAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLI 251
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
Y KC + ++ +F M N V+W +++A + Q + K A ++ +
Sbjct: 252 DFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEK-----------ASVLYLR 300
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ + SS+L+ C+ + LE G IHA +K ++ VG+ALV+MY KCG
Sbjct: 301 SRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGC 360
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV--RPNQVTFVGAL 496
IE + + F EM + L++ S+I G+A+ AL LFEDM G PN +TFV L
Sbjct: 361 IEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLL 420
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS AG V + F+ M+ Y I+P +HY C++DM R G +E+AF+FIKKM +P
Sbjct: 421 SACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPT 480
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W CR HG LG AAE L KL PKD ++ +L + F +AGRW + V+
Sbjct: 481 ISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+ + + +SWI +K++V++F+ D H + EI +L +L K + GYK
Sbjct: 541 MKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLS 600
Query: 677 LTD----EESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D E++A V +HSEKLA+AFGL+ P+ PI + K+ +C DCH+F K ++ R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EIIVRD+ R H+F +G C+C+D+
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDY 683
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 194/424 (45%), Gaps = 27/424 (6%)
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
T LG L S S+RLG+ +HA +VK + + N L ++YS SA
Sbjct: 5 TADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV 64
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
+NV+SWT+++ +NG L F +M EG+ PN+FT + ++
Sbjct: 65 LRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLP 124
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G Q+H+L +K G ++ V S +Y K L D+A+KLFD + NL TWNA I+
Sbjct: 125 VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISN- 183
Query: 353 AQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
S +G EA+ F + G +P+ TF L CS + L+ G Q+H
Sbjct: 184 -----------SVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMH 232
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L ++GF +DV V L++ Y KC +I + +F EM + +SW S++ + +
Sbjct: 233 GLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDE 292
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-- 529
+A L+ V + L+AC AGM LG + +K ++ +
Sbjct: 293 KASVLYLRSRKEIVETSDFMISSVLSAC--AGMAGLELG---RSIHAHAVKACVERNIFV 347
Query: 530 --CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
L+DM+ + GCIE++ +M E N V + I G G +++ E +
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTLNSLIGGYAHQGQVDMALALFED---MA 403
Query: 588 PKDC 591
P+ C
Sbjct: 404 PRGC 407
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 140/297 (47%), Gaps = 8/297 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ E G + + ++ L C + L +H + ++G D V L
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ YGKC + ++ +F + N VSW SL++ YVQN + E A ++L + ++
Sbjct: 251 IDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSD 310
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ + L+AC+ + + LG+ IHA+ VK E + VG++L +Y CG + + +AF+
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI--QPNEFTLTSISSVCGTMLSLR 293
+ EKN+++ ++IG G+ L F M G PN T S+ S C ++
Sbjct: 371 MPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVE 430
Query: 294 VGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAM 348
G ++ S+ G + I+ + + G+V++A + M + W A+
Sbjct: 431 NGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGAL 487
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/726 (32%), Positives = 404/726 (55%), Gaps = 38/726 (5%)
Query: 37 YQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEII 96
Y R+G+ +SE +R +L +L+ G ++ S+L+ C +++ + I
Sbjct: 127 YGRAGN-------SSEVIRCF----SLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
H +K G D +V L+++Y + + A+ +FD +P ++ SW ++ISGY Q+
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+ A+ + L A + T V+L L+AC+ G IH+Y +K+ E + V N L
Sbjct: 233 KEAL-TLSNGLRAMDSVTVVSL---LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
LY+ G L K F+R+ ++++SW ++I A N + ++ + F +M IQP+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
TL S++S+ + +R V ++ G + ++ + N+++ +Y K GLVD A+ +F+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSG-MKPDLYTFSS 393
+ + ++++WN +I+G+AQ NG +EA+ +++ + G + + T+ S
Sbjct: 409 WLPNTDVISWNTIISGYAQ------------NGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L CS+ AL QG ++H LK G DV V T+L +MY KCGR+E A +F ++
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+ W ++I H +A+ LF++ML GV+P+ +TFV L+ACS++G+V E FE
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
MMQ +Y I P + HY C++DM+ R G +E A FIK M +P+ IW ++ CR HGN+
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+LG A+E L +++P+ + +L +++ SAG+WE V ++++ + L +T WS + +
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHS 688
+KV F + HP E+++ L L K K GY F L D +E + HS
Sbjct: 697 DNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHS 756
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
E+LAIAF L+ TP + I + K+ +C DCH+ K I+ +T REIIVRDS R H F NG
Sbjct: 757 ERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGV 816
Query: 749 CTCRDF 754
C+C D+
Sbjct: 817 CSCGDY 822
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 269/542 (49%), Gaps = 40/542 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+L + C N L +A+ +HA +V + Q+ + LVN+Y GN+ A+ FD++
Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 139 NVVSWTSLISGYVQNSQPELAIHVF-LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+V +W +ISGY + I F L ML +G P T + L AC ++ G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H +K+ D V SL LYS ++ +A F+ + +++ SW +I ++G A
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 258 VQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L LS G++ + T+ S+ S C G +HS IK G S L V N
Sbjct: 233 KEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ LY + G + + QK+FD M +L++WN++I + +L + L A+S+F
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY----ELNEQPL-------RAISLF 336
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKK 435
++ S ++PD T S+ +I S+L + + TL+ G FL D+ +G A+V MY K
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVG 494
G ++ A VF + +ISW ++I+G+A + + +A++++ M G + NQ T+V
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMD 552
L ACS AG + + + ++ + K +D ++ L DM+ + G +E+A ++
Sbjct: 457 VLPACSQAGALRQGM---KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDI-----FVSAG 605
N V W+ IA HG+ E +++L +KP D ++ LL V G
Sbjct: 514 -RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLVDEG 571
Query: 606 RW 607
+W
Sbjct: 572 QW 573
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 385/707 (54%), Gaps = 30/707 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
EA L E G V + SY L + C +SLS+ ++H + + +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ +Y +C ++E+A K+FD + +N VS T++IS Y + + A+ +F ML +G+ P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T L + + ++ G+QIHA+V++ +TS+ + ++Y CG L A + F+
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ K ++ T ++ + G A L+ F +++EG++ + F + + C ++ L +
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ KLG S + V ++ Y+KC + A + F + N V+W+A+I+G+ Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP-DLYTFSSILTICSRLVALEQGEQIHAL 413
M EA+ F L S + +T++SI CS L G Q+HA
Sbjct: 364 MSQF-----------EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K + +AL+ MY KCG ++ A+ VF M +++WT+ I+G A + + +A
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L+LFE M+ G++PN VTF+ L ACS+AG+V + + M ++Y + P +DHY C+ID
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
++ R G ++EA F+K M FEP+ + W F++GC H N+ELG A E+L +L P+D
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y + +++ AG+WE+ A + L E L + SWI+ K K++ F D HPQ+ EI
Sbjct: 593 YVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Query: 654 FKVLDELVEKAKCFGYKQQESFE--LTDEESASVYHSEKLAIAFGLL----NTPIVSPIL 707
++ L E G+ + + F+ +T+ + HSE+LAIAFGL+ N P +PI
Sbjct: 653 YEKLKEFD------GFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAP--APIK 704
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
V K+ C DCH F K ++ +T EI++RDS+R H F G C+C D+
Sbjct: 705 VFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDY 751
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
Q+ +L LS H EA +++ +G+ Y++ + C L +L G +H
Sbjct: 47 QGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH 106
Query: 412 ALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
++ G + V++ ++ MY +C +E A ++F EMS +S T+MI+ +A +
Sbjct: 107 D-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGIL 165
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+A+ LF ML +G +P + L + N
Sbjct: 166 DKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/737 (32%), Positives = 391/737 (53%), Gaps = 41/737 (5%)
Query: 53 PVRSLGFQEALSVLTEG--PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
P+ S+ ++LT K S+ L+ +C N+K L +HAH+++TG FF
Sbjct: 7 PLASVPISSNPTILTANNEQKSNPSTVPILIDKCANKKHLKQ---LHAHMLRTGL---FF 60
Query: 111 VMTFLVNVYGKCG-----NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
++ C +++ A KVFD +PR N+ +W +LI + + +P + VF+
Sbjct: 61 DPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQ 120
Query: 166 ML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
ML E+ +P + T + A + + S+ G+ IH V+K D + NSL YS+ G
Sbjct: 121 MLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLG 180
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L+SA F++I EK+++SW ++I + G + L+ F +M E +PN T+ + S
Sbjct: 181 DLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLS 240
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + L G + G NL + N+++ +Y+KCG +++A++LFD M ++V+
Sbjct: 241 ACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVS 300
Query: 345 WNAMIAGHAQMMD----------LAKDDLSAHNG----------GTEALSIFSKLN-SSG 383
W MI G+A++ D + ++D++A N EAL+IF +L +
Sbjct: 301 WTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKN 360
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
KP+ T +S L C++L A++ G IH K G + + T+L++MY KCG +E+A
Sbjct: 361 TKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKAL 420
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
VF + R + W++MI G A H A+ LF M V+PN VTF L ACS++G
Sbjct: 421 EVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSG 480
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+V E +F M+ Y + P HY C++D+ R GC+EEA + I+KM P+ +W
Sbjct: 481 LVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGAL 540
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
+ CR +GN+EL A +LL+ + +Y +L +I+ AG+W+ V+ ++ + L
Sbjct: 541 LGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLE 600
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTDE- 680
+ S I + ++ F D HP S EI+ LDE+V + K GY ES + +E
Sbjct: 601 KEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEE 660
Query: 681 ---ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRD 737
E A HSEKLAIA+GL+ PI +VK+ +C DCH+ K+I+ L R+I++RD
Sbjct: 661 YMKEHALNLHSEKLAIAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRD 720
Query: 738 SKRLHKFVNGHCTCRDF 754
R H F G+C+C D+
Sbjct: 721 RYRFHHFSGGNCSCMDY 737
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 234/698 (33%), Positives = 379/698 (54%), Gaps = 29/698 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T +V L+ C L IHAH G H D FV T L+++Y +C A
Sbjct: 97 PNKYTFPFV--LKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAA 154
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSL 188
VF +P +VV+W ++++GY + AI LDM + G P TL + L +
Sbjct: 155 NVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQH 214
Query: 189 ESIRLGKQIHAYVVKY---QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ G +HAY ++ Q E+ +G +L +Y+ C L A + F+ + +N ++W+
Sbjct: 215 GALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWS 274
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS---VCGTMLSLRVGAQVHSLG 302
+IG + F ML EG+ + TS++S VC ++ LR+G Q+H+L
Sbjct: 275 ALIGGFVLCDRMTEAFNLFKDMLVEGM--CFLSATSVASALRVCASLADLRMGTQLHALL 332
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
K G ++L NS++ +Y K GL++EA LFD ++ + +++ A+++G+ Q
Sbjct: 333 AKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQ-------- 384
Query: 363 LSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG EA +F K+ + ++PD+ T S++ CS L AL+ G H + G
Sbjct: 385 ----NGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLAL 440
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ + +L++MY KCGRI+ + +VF +M R ++SW +MI G+ H L +A LF M
Sbjct: 441 ETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMK 500
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G P+ VTF+ +AACS++G+V E +F+ M +Y I P M+HY+C++D+ R G +
Sbjct: 501 NQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFL 560
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA+ FI+ M + + +W + CR H N++LG + + KL P+ ++ +L +IF
Sbjct: 561 DEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIF 620
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AGR+++ A V+ + + + ++ SWI I +++F D HP S +I+ LD ++
Sbjct: 621 SAAGRFDEAAEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNIL 680
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K GY+ SF L D +E A +YHSEKLAIAFG+L+ I V K+ +C
Sbjct: 681 IDIKKLGYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCG 740
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH IK +T + R IIVRD+ R H F NG C+C DF
Sbjct: 741 DCHTAIKYMTLVRNRTIIVRDANRFHHFKNGQCSCGDF 778
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 222/478 (46%), Gaps = 27/478 (5%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + A++VFD +P + ++ +LI Y AI ++ ML P T L
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
ACS+L + G+ IHA+ D V +L LY C A F ++ ++V+
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W ++ +G + M G++PN TL S+ + +L G VH+
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 302 GIKLGYASN---LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++ N + + +++ +Y KC + A ++F GM+ N VTW+A+I G +
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGM-KPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
TEA ++F + GM + +S L +C+ L L G Q+HAL K+
Sbjct: 287 -----------TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKS 335
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G +D+ G +L++MY K G I A+ +F E++ + IS+ ++++G+ + + +A +F
Sbjct: 336 GIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVF 395
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV-MDHYMC--LIDM 534
+ M V+P+ T V + ACS+ AL + I+ + ++ +C LIDM
Sbjct: 396 KKMQACNVQPDIATMVSLIPACSH----LAALQHGRCSHGSVIIRGLALETSICNSLIDM 451
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+ + G I+ + KM + V W+ IAG HG LG A L +K + E
Sbjct: 452 YAKCGRIDLSRQVFDKMPAR-DIVSWNTMIAGYGIHG---LGKEATTLFLSMKNQGFE 505
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 239/693 (34%), Positives = 370/693 (53%), Gaps = 19/693 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEA 128
P + +S SL++ V+ + HA I+KT + F+ LVN+Y K A
Sbjct: 2 PFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
Q + P +VV+WT+LI+G VQN + A+ F +M P + T A A SL
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S +GKQ+HA VK D VG S +YS G A K F+ + E+N+ +W +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G L F + EG +PN T + + C LR+G Q+H ++ G+
Sbjct: 182 SNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFE 241
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+++ V N ++ Y KC V ++ +F G+S N V+W +MI + Q + K
Sbjct: 242 ADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEK-------- 293
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
A +F + G++P + SS+L+ C+ L LE G+ +H L +K + ++ VG+A
Sbjct: 294 ---ACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSA 350
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR-- 486
LV+MY KCG IE A R F EM R L++W +MI G+A+ + A+ LF++M R
Sbjct: 351 LVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVA 410
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN VTFV L+ACS AG V + FE M+ Y I+P +HY C++D+ R G +E+A+
Sbjct: 411 PNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQ 470
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FIKKM P +W + + G ELG AA+ L +L P D ++ +L ++F +AGR
Sbjct: 471 FIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGR 530
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
WE+ +V+ ++ + + SWI + V+ F+ D H +++EI +L +L + +
Sbjct: 531 WEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEA 590
Query: 667 FGYKQQESFELTD--EESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY SF L D EE ++ YHSEK+A+AFGL++ P PI + K+ +C DCH+
Sbjct: 591 AGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGDCHSA 650
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK I+ + REIIVRD+ H+F + C+CRD+
Sbjct: 651 IKFISGIVGREIIVRDNNLFHRFRDNQCSCRDY 683
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 149/305 (48%), Gaps = 9/305 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++ + L C L +H ++++G D V L++ YGKC +
Sbjct: 203 EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGC 262
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
++ +F + + N VSW S+I YVQN + E A VFL + G PT+ + + L+AC+
Sbjct: 263 SEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAG 322
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + +GK +H VK + VG++L +Y CGS+ A +AF+ + E+N+++W +
Sbjct: 323 LSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAM 382
Query: 248 IGACGENGEAVQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIK 304
IG G+A + F +M S + PN T + S C S+ VG ++ S+ +
Sbjct: 383 IGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGR 442
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA-----GHAQMMDL 358
G ++ L + G+V++A + M + W A++ G +++ +
Sbjct: 443 YGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKV 502
Query: 359 AKDDL 363
A D+L
Sbjct: 503 AADNL 507
>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 765
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/690 (31%), Positives = 387/690 (56%), Gaps = 16/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + SY L + C +LS+ ++ H + + ++ + F+ ++ +Y C + A
Sbjct: 87 GISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRM-ANSNKFIDNCILKMYCDCKSFTSA 145
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++ FD + ++ SW+++IS Y + + + A+ +FL ML+ G P + T + + +
Sbjct: 146 ERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDP 205
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ LGKQIH+ +++ + S+ + ++Y CG L+ A A N++ KN ++ T ++
Sbjct: 206 SMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLM 265
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ L F KM+SEG++ + F + I C + L G Q+HS IKLG
Sbjct: 266 VGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLE 325
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V ++ Y+KC + A++ F+ + N +W+A+IAG+ Q +
Sbjct: 326 SEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDR-------- 377
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
AL +F + S G+ + + +++I CS + L G QIHA +K G ++ + +A
Sbjct: 378 ---ALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESA 434
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
+++MY KCG+++ A + F+ + ++WT++I A H + +AL+LF++M +GVRPN
Sbjct: 435 MISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPN 494
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+G L ACS++G+V E + M EY + P +DHY C+ID++ R G ++EA + I
Sbjct: 495 AVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVI 554
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ + FEP+ + W + GC H N+E+G AA+ + +L P D +Y ++ +++ AG+W+
Sbjct: 555 RSLPFEPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWD 614
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL---VEKAK 665
+ A + + E L + SWI +K KV+ F D HPQ+ +I+ L EL +K+K
Sbjct: 615 EAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKKSK 674
Query: 666 CFGYKQQESF-ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
++ + + T+ + + HSE+LAIA+GL+ T +PI+V K+T C+DCH+F K
Sbjct: 675 ERLLNEENALCDFTERKEQLLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHDFAKR 734
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ +T RE++VRD R H +G C+CRD+
Sbjct: 735 VSIVTGRELVVRDGNRFHHINSGECSCRDY 764
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 201/407 (49%), Gaps = 13/407 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L +L G +S + +L+ + L + IH+ +++ G + + T + N+Y KC
Sbjct: 181 LRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKC 240
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G ++ A+ + + R N V+ T L+ GY + ++ A+ +F M+ G L
Sbjct: 241 GWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIIL 300
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC++L + GKQIH+Y +K E + SVG L Y C +A +AF I E N
Sbjct: 301 KACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF 360
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW+ +I ++G+ + L F + S+G+ N F T+I C + L GAQ+H+
Sbjct: 361 SWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADA 420
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IK G + L ++++ +Y KCG VD A + F + + V W A+I HA
Sbjct: 421 IKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAY-------- 472
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLS 421
H EAL +F ++ SG++P+ TF +L CS +++G++I +++ + G
Sbjct: 473 ---HGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNP 529
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ ++++Y + G ++ A V + ++SW S++ G +H
Sbjct: 530 TIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGCWSH 576
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/715 (33%), Positives = 392/715 (54%), Gaps = 55/715 (7%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDN 134
+SLL C K+L + IIHA ++KTG H + ++ L+ + + A VFD+
Sbjct: 6 LSLLHNC---KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDS 62
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ N++ W ++ G+ +S P A+++++ M+ G P + T L AC+ ++ R G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREG 122
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLY-------------------------------STC 223
+QIH +V+K + D V SL ++Y ++
Sbjct: 123 QQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASN 182
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G + SA K F+ I K+V+SW +I E G + L F +M+ ++P+E T+ ++
Sbjct: 183 GYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVL 242
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
S C S+ +G QVHS G+ SNL++ N+++ LY+KCG V+ A LF+G+S+ +++
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI 302
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WN +I G+ M N EAL +F ++ SG P+ T SIL C+ L A
Sbjct: 303 SWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351
Query: 404 LEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
++ G IH K G + + T+L++MY KCG IE A +VF M R+L SW +MI
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
GFA H ++ A +F M G+ P+ +TFVG L+ACS++GM+ F M ++YKI
Sbjct: 412 FGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKI 471
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
P ++HY C+ID+ G +EA + I M+ +P+ VIW + C+ HGN+ELG A+
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQ 531
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
L+K++PK+ SY +L +I+ +AGRW +VA + L ++ + + S I I V+ F
Sbjct: 532 NLIKIEPKNSGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFG 696
D LHP++ EI+ +L+E+ + G+ S L + +E A +HSEKLAIAFG
Sbjct: 592 IGDKLHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 651
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
L++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+C
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + E K S+ V++L C S+ +H+ I G + ++
Sbjct: 216 YKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNA 275
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG +E A +F+ L +V+SW +LI GY + + A+ +F +ML +G P
Sbjct: 276 LIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPN 335
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
VT+ + L AC+ L +I +G+ IH Y+ K + +S+ SL +Y+ CG + +A +
Sbjct: 336 EVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQV 395
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + +++ SW +I +G A FS+M +GI+P++ T + S C L
Sbjct: 396 FDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGML 455
Query: 293 RVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + S+ L ++ L GL EA+++ + M
Sbjct: 456 DLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSM 501
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/688 (32%), Positives = 388/688 (56%), Gaps = 24/688 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S Y SL+ ++ L IHA ++ G F++T L++ G++ A++VFD+
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
LPR + W ++I GY +N+ + A+ ++ +M A P + T L ACS L +++G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTTVIGACG 252
+ +HA V + + D V N L +LY+ C L SA F + E+ ++SWT ++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NGE ++ L FS M ++P+ L S+ + + L+ G +H+ +K+G
Sbjct: 199 QNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
+ S+ +Y KCG V A+ LFD M NL+ WNAMI+G+A+ NG E
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK------------NGYARE 306
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ + ++PD + +S ++ C+++ +LEQ ++ ++ + DV + +AL++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
M+ KCG +E A VF R ++ W++MI G+ H + +A+ L+ M GV PN VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+G L AC+++GMV E +F +M ++KI P HY C+ID+ R G +++A++ IK M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNLM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+P +W ++ C++H ++ELG YAA+QL + P + Y L +++ +A W+ VA
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-- 669
V+ +E+ L++ SW+ ++ ++ +F+ D HP+ EI + ++ + + K G+
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Query: 670 -KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
K +L DEE+ HSE++AIA+GL++TP +P+ + K+ C +CH K+I+
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L REI+VRD+ R H F +G C+C D+
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 223/471 (47%), Gaps = 20/471 (4%)
Query: 55 RSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ FQ+AL + + + S ++ LL+ C L +HA + + G D F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KC + A+ VF+ LP +VSWT+++S Y QN +P A+ +F M +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRK 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P V L + L A + L+ ++ G+ IHA VVK E + + SL ++Y+ CG + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F++++ N++ W +I +NG A + + F +M+++ ++P+ ++TS S C
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ SL ++ + Y ++ + ++++ ++ KCG V+ A+ +FD ++V W+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+ H EA+S++ + G+ P+ TF +L C+ + +G
Sbjct: 396 IVGYG-----------LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
L ++++ + G +++A V M + ++ W ++++ H
Sbjct: 445 WFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
H L + L + P+ L+ A +++ + + KE
Sbjct: 505 --RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 240/708 (33%), Positives = 373/708 (52%), Gaps = 34/708 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT--FLVNVYGKCGNMEEAQKVFDNL 135
+SL+ C SL + HAH+++TG D + + F + ++E A+KVFD +
Sbjct: 35 ISLIDRC---SSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEI 91
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACSSLESIRL 193
P+ N +W +LI Y P +I FLDM+ E+ YP T + A + + S+ L
Sbjct: 92 PQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSL 151
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+ +H +K D V NSL Y +CG L+SA K F I+EK+V+SW ++I +
Sbjct: 152 GQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 211
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + L F KM SE ++ + T+ + S C + L G +V S + NL +
Sbjct: 212 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTL 271
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD----------LAKDDL 363
N+++ +Y KCG +++A++LFD M + VTW M+ G+A D + K D+
Sbjct: 272 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDI 331
Query: 364 SAHNG----------GTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
A N EAL +F +L +K + T S L+ C+++ ALE G IH+
Sbjct: 332 VAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHS 391
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
K G + V +AL++MY KCG +E+A VF + R + W++MI G A H +
Sbjct: 392 YIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSE 451
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
A+ +F M A V+PN VTF ACS+ G+V EA F M+ Y I P HY C++
Sbjct: 452 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIV 511
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
D+ R G +E+A FI+ M P+ +W + C+ H N+ L A +LL+L+P++
Sbjct: 512 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDG 571
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
++ +L +I+ +G+W++V+ ++ R L + S I I ++ F D HP S +
Sbjct: 572 AHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEK 631
Query: 653 IFKVLDELVEKAKCFGYKQQES--FELTDEESASV----YHSEKLAIAFGLLNTPIVSPI 706
++ L E++EK K GY+ + S ++ +EE HSEKLAI +GL++T I
Sbjct: 632 VYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKAI 691
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
V+K+ MC DCH K+I+ L REIIVRD R H F NG C+C DF
Sbjct: 692 RVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDF 739
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 142/294 (48%), Gaps = 38/294 (12%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQEC 84
T+K+K+ VS+ + +Q P ++L + + +E K + V +L C
Sbjct: 191 FTTIKEKD-VVSWNSMINGFVQ---KGSPDKALELFKKME--SEDVKASHVTMVGVLSAC 244
Query: 85 VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD----------- 133
+ L + ++I + + + + ++++Y KCG++E+A+++FD
Sbjct: 245 AKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 304
Query: 134 --------------------NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+P+ ++V+W +LIS Y QN +P A+ VF ++ N
Sbjct: 305 TMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIK 364
Query: 174 TN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
N +TL + L+AC+ + ++ LG+ IH+Y+ K + + V ++L +YS CG L A +
Sbjct: 365 LNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREV 424
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
FN + +++V W+ +IG +G + + F KM ++PN T T++ C
Sbjct: 425 FNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCAC 478
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L + K+ + VS L C +L IH++I K G +F+V + L+++Y KCG++
Sbjct: 359 LQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDL 418
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
E+A++VF+++ + +V W+++I G + A+ +F M EA P VT AC
Sbjct: 419 EKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCAC 478
Query: 186 S 186
S
Sbjct: 479 S 479
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 241/699 (34%), Positives = 391/699 (55%), Gaps = 29/699 (4%)
Query: 72 VQTSSYVSLLQEC----VNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNME 126
V T ++V LL + L +H HI++TG + LVN+Y KCG ++
Sbjct: 368 VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAID 427
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+A +VF L + VSW ++IS QN E A+ + M + P+N + L++C+
Sbjct: 428 KASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCA 487
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
SL + G+Q+H VK+ + DTSV N+L +Y CG+ + + + FN + E +++SW +
Sbjct: 488 SLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNS 547
Query: 247 VIGA-CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
++G + + + FS M+ G+ PN+ T ++ S + L +G QVH++ +K
Sbjct: 548 IMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKH 607
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V N++M Y K G +D ++LF MS + V+WN+MI+G+
Sbjct: 608 GAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYI----------- 656
Query: 365 AHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+NG E + + S D TFS +L C+ + ALE+G ++HA +++ SDV
Sbjct: 657 -YNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDV 715
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VV +AL++MY KCGRI+ AS+VF MS + SW SMI+G+A H L +AL++FE+M
Sbjct: 716 VVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRN 775
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G P+ VTFV L+ACS+AG+V L YFEMM+ ++ I P ++HY C+ID+ R G + +
Sbjct: 776 GACPDHVTFVSVLSACSHAGLVDRGLDYFEMME-DHGILPHIEHYSCVIDLLGRAGKLLK 834
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGN---MELGFYAAEQLLKLKPKDCESYAMLLDI 600
++I +M +PN +IW + CR+ + ++LG A+ LL+L+P++ +Y + +
Sbjct: 835 IQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNF 894
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + GRWED A + + + SW+ + D V++F D HP + EI++ L+ L
Sbjct: 895 YAATGRWEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFL 954
Query: 661 VEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
++K K GY F L D E + YHSEKLA+AF L + PI ++K+ +C
Sbjct: 955 IQKIKNAGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVC 1014
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH + I+ + R+II+RDS R H F +G C+C D+
Sbjct: 1015 GDCHTAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDY 1053
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 209/432 (48%), Gaps = 29/432 (6%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
R + E +H +VK G D F+ LVN+Y K + A++VFD + N VSWT L
Sbjct: 69 RGEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCL 128
Query: 147 ISGYVQNSQPELAIHVFLDMLEAG---NYPTNVTLGTALTAC--SSLESIRLGKQIHAYV 201
+SGYV + + A VF ML G + PT T G+ L AC + + + Q+H V
Sbjct: 129 VSGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLV 188
Query: 202 VKYQTEDDTSVGNSLCSLYSTC--GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
K +T+V N+L S+Y C G A + F+ +++++W ++ + G V
Sbjct: 189 SKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVS 248
Query: 260 GLRFFSKMLSEG----IQPNEFTLTS-ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
F ML + ++PNE T S I++ + S V QV + +K G +S+L V
Sbjct: 249 TFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGSSSDLYVG 308
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++++ + + G++DEA+ +F + N VT N +I G L + EA+
Sbjct: 309 SALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVG-----------LVKQHCSEEAVG 357
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLV----ALEQGEQIHALTLKTGFLS-DVVVGTAL 429
IF S + + TF +L+ + L +G ++H L+TG + + + L
Sbjct: 358 IFMGTRDSFVV-NTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGL 416
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
VNMY KCG I++ASRVF + R +SW ++I+ + A+ + M + P+
Sbjct: 417 VNMYAKCGAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSN 476
Query: 490 VTFVGALAACSN 501
+ L++C++
Sbjct: 477 FAAISGLSSCAS 488
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 247/520 (47%), Gaps = 40/520 (7%)
Query: 76 SYVSLLQECVNRKS--LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC--GNMEEAQKV 131
++ S+L+ C + L+ A +H + KT + V L+++YG C G +AQ+V
Sbjct: 162 TFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQV 221
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN----YPTNVTLGTALTACSS 187
FD P ++++W +L+S Y + +F+ ML + P T G+ +TA +S
Sbjct: 222 FDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITA-TS 280
Query: 188 LESIRLG--KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
L S G Q+ A V+K + D VG++L S ++ G L+ A F ++E+N ++
Sbjct: 281 LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAVTLN 340
Query: 246 TVIGA-----CGENGEAVQGLRFFSKMLSEGIQPNEFT--LTSISSVCGTMLSLRVGAQV 298
+I C E + F S + + F L++++ L G +V
Sbjct: 341 GLIVGLVKQHCSEEAVGI----FMGTRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREV 396
Query: 299 HSLGIKLGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
H ++ G + + N ++ +Y KCG +D+A ++F + + V+WN +I+ ++D
Sbjct: 397 HGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTIIS----VLD 452
Query: 358 LAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
NG E A+ + + + P + S L+ C+ L L G+Q+H +K
Sbjct: 453 --------QNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVK 504
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI-TGFANHSLSHQALQ 475
G D V ALV MY CG + +F M+ ++SW S++ ++H+ + ++++
Sbjct: 505 WGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVE 564
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP-VMDHYMCLIDM 534
+F +M+ +G+ PN+VTFV L+A S ++ ++ K I+ +D+ L+
Sbjct: 565 VFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDN--ALMSC 622
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ + G ++ M + V W+ I+G +G+++
Sbjct: 623 YAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQ 662
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
E++H +K G D+ + LVN+Y K R+ A +VF M R +SWT +++G+
Sbjct: 76 ERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLS 135
Query: 468 SLSHQALQLFEDMLLAGV---RPNQVTFVGALAACSNAG 503
++ +A ++F+ ML G RP TF L AC +AG
Sbjct: 136 GITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAG 174
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 222/688 (32%), Positives = 388/688 (56%), Gaps = 24/688 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S Y SL+ ++ L IHA ++ G F++T L++ G++ A++VFD+
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
LPR + W ++I GY +N+ + A+ ++ +M A P + T L ACS L +++G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTTVIGACG 252
+ +HA V + + D V N L +LY+ C L SA F + E+ ++SWT ++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NGE ++ L FS+M ++P+ L S+ + + L+ G +H+ +K+G
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
+ S+ +Y KCG V A+ LFD M NL+ WNAMI+G+A+ NG E
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK------------NGYARE 306
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ + ++PD + +S ++ C+++ +LEQ ++ ++ + DV + +AL++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
M+ KCG +E A VF R ++ W++MI G+ H + +A+ L+ M GV PN VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+G L AC+++GMV E +F M ++KI P HY C+ID+ R G +++A++ IK M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+P +W ++ C++H ++ELG YAA+QL + P + Y L +++ +A W+ VA
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-- 669
V+ +E+ L++ SW+ ++ ++ +F+ D HP+ EI + ++ + + K G+
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Query: 670 -KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
K +L DEE+ HSE++AIA+GL++TP +P+ + K+ C +CH K+I+
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L REI+VRD+ R H F +G C+C D+
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 222/471 (47%), Gaps = 20/471 (4%)
Query: 55 RSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ FQ+AL + + + S ++ LL+ C L +HA + + G D F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KC + A+ VF+ LP +VSWT+++S Y QN +P A+ +F M +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P V L + L A + L+ ++ G+ IHA VVK E + + SL ++Y+ CG + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F++++ N++ W +I +NG A + + F +M+++ ++P+ ++TS S C
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ SL ++ + Y ++ + ++++ ++ KCG V+ A+ +FD ++V W+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+ H EA+S++ + G+ P+ TF +L C+ + +G
Sbjct: 396 IVGYG-----------LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
++++ + G +++A V M + ++ W ++++ H
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
H L + L + P+ L+ A +++ + + KE
Sbjct: 505 --RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/710 (31%), Positives = 392/710 (55%), Gaps = 60/710 (8%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
+ ++ F L+++Y K G + +A+ VF +P + VSWT ++ G + + A+ FL
Sbjct: 93 ARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFL 152
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
DM+ G P+ L L++C++ E+ +G+++H++V+K V NS+ +Y CG
Sbjct: 153 DMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCG 212
Query: 225 SLNSAIKAFNRIR-------------------------------EKNVMSWTTVIGACGE 253
+A F R++ E++++SW +I +
Sbjct: 213 DAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQ 272
Query: 254 NGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
NG L+FFS+ML+ ++P+EFT+TS+ S C + L++G Q+HS ++ G + +
Sbjct: 273 NGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQ 332
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMD----------LAK 360
+ N+++ Y K G V+ A+++ D ++ +N++++ A++ G+ ++ D +
Sbjct: 333 IMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNN 392
Query: 361 DDLSA---------HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
D+ A NG EA+ +F + SG +P+ +T +++L+ C+ L L G+QI
Sbjct: 393 RDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQI 452
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSL 469
H +++ V V A++ +Y + G + A RVF ++ R ++WTSMI A H L
Sbjct: 453 HCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGL 512
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
QA+ LFE+ML GV+P++VT++G +AC++AG + + Y+E M E+ I P M HY
Sbjct: 513 GEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYA 572
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R G + EA +FI++M P+ V+W +A CR N +L AAE+LL + P
Sbjct: 573 CMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPD 632
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+ +Y+ L +++ + GRW D A + L +++ + + +SW ++ KV+ F +D LHPQ
Sbjct: 633 NSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQ 692
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVS 704
I K E+ E+ K G+ + L D +E HSEKLAIAFGL++TP +
Sbjct: 693 RDAICKKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKT 752
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ ++K+ +C DCH IK I+ + REIIVRD+ R H F +G+C+C+D+
Sbjct: 753 TLRIMKNLRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDY 802
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 234/528 (44%), Gaps = 87/528 (16%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ EG ++L C ++ +H+ ++K G V ++ +YGKC
Sbjct: 152 LDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKC 211
Query: 123 GNMEEAQKV-------------------------------FDNLPRINVVSWTSLISGYV 151
G+ E A+ V F+N+ ++VSW ++I+GY
Sbjct: 212 GDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYN 271
Query: 152 QNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
QN ++A+ F ML A + P T+ + L+AC++L +++GKQ+H+Y+++ +
Sbjct: 272 QNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSS 331
Query: 211 SVGNSLCSLYSTCGSLNSAIK---------------------------------AFNRIR 237
+ N+L S Y+ GS+ +A + F+ +
Sbjct: 332 QIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMN 391
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++V++WT +I +NG+ + + F M+ G +PN TL ++ S C ++ L G Q
Sbjct: 392 NRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQ 451
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMM 356
+H I+ ++ V N+I+ +Y + G V A+++FD + VTW +MI AQ
Sbjct: 452 IHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQ-- 509
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL- 415
H G +A+ +F ++ G+KPD T+ + + C+ +++G++ + L
Sbjct: 510 ---------HGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLN 560
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQAL 474
+ G + ++ +V++ + G + A M + W S++ + A
Sbjct: 561 EHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAE 620
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
E +L + P+ GA +A +N VY A G + + +K++
Sbjct: 621 LAAEKLL--SIDPDN---SGAYSALAN---VYSACGRWNDAARIWKLR 660
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 205/460 (44%), Gaps = 95/460 (20%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME------------ 126
S+L C N + L + +H++I++TG +M L++ Y K G++E
Sbjct: 301 SVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVA 360
Query: 127 ---------------------EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+A++VFD + +V++WT++I GY QN Q + A+ +F
Sbjct: 361 DLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRS 420
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M+ +G P + TL L+AC+SL + GKQIH ++ E SV N++ ++Y+ GS
Sbjct: 421 MIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGS 480
Query: 226 LNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ A + F++I K ++WT++I A ++G Q + F +ML G++P+ T + S
Sbjct: 481 VPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C H+ G +D+ ++ ++ M + + +
Sbjct: 541 AC-----------THA------------------------GFIDKGKRYYEQMLNEHGIV 565
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
++ +A M+DL L+ TEA ++ + PD + S+L C R+
Sbjct: 566 --PEMSHYACMVDL----LARAGLLTEAHEFIQRMP---VAPDTVVWGSLLAAC-RVRKN 615
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-----VEMSTRTLISWT- 458
++ A L + + +AL N+Y CGR A+R++ + T SWT
Sbjct: 616 ADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTH 675
Query: 459 --SMITGFANHSLSH--------QALQLFEDMLLAGVRPN 488
S + F + H +A +++E++ AG P+
Sbjct: 676 VQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPD 715
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/683 (32%), Positives = 385/683 (56%), Gaps = 22/683 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C S+ +IIH I K G +D V L+++Y K + + +++FD +
Sbjct: 221 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 280
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ VSW ++I GY Q E +I +F++M+ P +T+ + L AC L + GK +H
Sbjct: 281 DAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHLGDLEFGKYVH 339
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
Y++ E DT+ N L ++Y+ CG+L ++ + F+ ++ K+ +SW ++I +NG
Sbjct: 340 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD 399
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ ++ F KM+ ++P+ T + S+ + L +G ++H K+G+ SN+ V N+++
Sbjct: 400 EAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLV 458
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGTEALSIF 376
+Y KCG + ++ K+F+ M +++TWN +IA H++ +L L +
Sbjct: 459 DMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG-------------LRMI 505
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
S++ + G+ PD+ T SIL +CS L A QG++IH K G SDV VG L+ MY KC
Sbjct: 506 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 565
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + + +VF M T+ +++WT++I+ + +A++ F +M AG+ P+ V FV +
Sbjct: 566 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 625
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS++G+V E L YF M+K+YKI+P ++HY C++D+ R +++A DFI M +P+
Sbjct: 626 FACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPD 685
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
IW ++ CR G+ E+ +E++++L P D Y ++ +I+ + G+W+ V ++
Sbjct: 686 SSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKS 745
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+ L + SW+ I++KVY F Q E+ K+L L GY F
Sbjct: 746 IKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFV 805
Query: 677 LTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E + HSE+LAIAFGLLNT +P+ V+K+ +C DCH K I+ + R
Sbjct: 806 LHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQR 865
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
E++VRD+ R H F +G C+C D+
Sbjct: 866 ELLVRDANRFHVFKDGACSCGDY 888
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 259/523 (49%), Gaps = 31/523 (5%)
Query: 59 FQEALSVLTEGPKVQ----TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EALS+ +E +++ T ++ S++ C A+ IH ++ G D ++
Sbjct: 96 FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNA 155
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y + ++++A+KVF+ +P +VVSW SLISGY N A+ ++ G P
Sbjct: 156 LIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPD 215
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T+ + L AC L S+ G IH + K + D V N L S+Y L + F+
Sbjct: 216 SYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFD 275
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ ++ +SW T+I + G + ++ F +M+++ +P+ T+TSI CG + L
Sbjct: 276 KMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEF 334
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G VH I GY + N ++ +Y KCG + +Q++F GM + V+WN+MI + Q
Sbjct: 335 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 394
Query: 355 MMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG EA+ +F K+ + +KPD T+ +L++ ++L L G+++H
Sbjct: 395 ------------NGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCD 441
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
K GF S++VV LV+MY KCG + + +VF M R +I+W ++I + +
Sbjct: 442 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 501
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L++ M GV P+ T + L CS G + ++ + + V
Sbjct: 502 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNV---- 557
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI+M+ + G + +F K M + V W+ I+ C +G
Sbjct: 558 --LIEMYSKCGSLRNSFQVFKLMK-TKDVVTWTALISACGMYG 597
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 231/487 (47%), Gaps = 24/487 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD-NLPRINVVSWTSLISGYVQNS 154
+H+ I+ G H L+ Y + + VF P NV W S+I N
Sbjct: 35 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
A+ ++ + P T + + AC+ L + K IH V+ D +GN
Sbjct: 95 LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGN 154
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +Y L+ A K F + ++V+SW ++I NG + L + + + G+ P
Sbjct: 155 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVP 214
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC-GLVDEAQKL 333
+ +T++S+ CG + S+ G +H L K+G ++ V N ++ +Y K GL+D +++
Sbjct: 215 DSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID-GRRI 273
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M + V+WN MI G++Q+ E++ +F ++ + KPDL T +S
Sbjct: 274 FDKMVLRDAVSWNTMICGYSQV-----------GLYEESIKLFMEMVNQ-FKPDLLTITS 321
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL C L LE G+ +H + +G+ D L+NMY KCG + + VF M +
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 381
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG--- 510
+SW SMI + + +A++LF+ M+ V+P+ VT+V L+ + G ++ LG
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLH--LGKEL 438
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ ++ + + V+ + L+DM+ + G + ++ + M + + W+ IA C
Sbjct: 439 HCDLAKMGFNSNIVVSN--TLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHS 495
Query: 571 GNMELGF 577
+ LG
Sbjct: 496 EDCNLGL 502
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 59 FQEALSV---LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
F EA+ + + K + +YV LL L + +H + K G + + V L
Sbjct: 398 FDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTL 457
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KCG M ++ KVF+N+ ++++W ++I+ V + L + + M G P
Sbjct: 458 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 517
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ + L CS L + R GK+IH + K E D VGN L +YS CGSL ++ + F
Sbjct: 518 ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKL 577
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
++ K+V++WT +I ACG GE + +R F +M + GI P+ +I C
Sbjct: 578 MKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFAC 628
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+LG + + TEG ++ +S+L C + + IH I K G D V L
Sbjct: 499 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 558
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG++ + +VF + +VV+WT+LIS + + A+ F +M AG P +
Sbjct: 559 IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH 618
Query: 176 VTLGTALTACS 186
V + ACS
Sbjct: 619 VAFVAIIFACS 629
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEM 449
FSSI + Q ++H+L + G V+ L+ Y + VF +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ + W S+I ++ L +AL L+ + ++P+ TF + AC AG++
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLL---- 129
Query: 510 GYFEMMQKEYKIKPVM----DHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
FEM + + M D Y+ LIDM+ R +++A ++M + V W+
Sbjct: 130 -DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 187
Query: 564 IAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAM 596
I+G +G N L Y + L + P +SY M
Sbjct: 188 ISGYNANGYWNEALEIYYRFRNLGVVP---DSYTM 219
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/712 (32%), Positives = 389/712 (54%), Gaps = 21/712 (2%)
Query: 51 SEPVRSLGFQEALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
SE + F+E++S+ + K+ ++ +L+ + + +H +++K G
Sbjct: 443 SEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFG 502
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+ V+ L+ Y K G +E A +FD L +VVSW S+I+G V N + +F+ M
Sbjct: 503 SNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 562
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
L G TL + L A +++ ++ LG+ +H + VK ++ N+L +YS CG+L
Sbjct: 563 LILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL 622
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
N A + F ++ + ++SWT+ I A G + F +M S+G++P+ +T+TSI C
Sbjct: 623 NGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHAC 682
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
SL G VHS IK G SNL V N+++ +Y KCG V+EA+ +F + ++V+WN
Sbjct: 683 ACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWN 742
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
MI G++Q ++ EAL +F + KPD T + +L C+ L AL++
Sbjct: 743 TMIGGYSQ-----------NSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDK 790
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G +IH L+ G+ SD+ V ALV+MY KCG + A +F + + LISWT MI G+
Sbjct: 791 GREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGM 850
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H ++A+ F +M +AG+ P++ +F L ACS++G++ E +F M+ E ++P ++
Sbjct: 851 HGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLE 910
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C++D+ R+G + +A+ FI+ M +P+ IW V ++GCR H +++L AE + +L
Sbjct: 911 HYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFEL 970
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P + Y +L +++ A +WE+V ++ ++ + SWI + K F +
Sbjct: 971 EPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSK 1030
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE-----ESASVYHSEKLAIAFGLLNTP 701
HPQ+ I +L +L + + Y + L +E E HSEK A+AFG+LN P
Sbjct: 1031 HPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAFGILNLP 1090
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
+ V K+ +C DCH K ++ T REI++RDS R H F +G C+CRD
Sbjct: 1091 PGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRD 1142
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 292/564 (51%), Gaps = 45/564 (7%)
Query: 59 FQEALSVLTEGPKVQT--SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ A+ +LT+ + +SY S+LQ C +KSL + + +H+ I+ G D + LV
Sbjct: 352 LRNAIELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLV 411
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y CG++ + +K+FD + V W L+S Y + ++ +F M + G
Sbjct: 412 FMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCY 471
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L ++L ++ K++H YV+K +T+V NSL + Y G + SA F+ +
Sbjct: 472 TFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 531
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E +V+SW ++I C NG + GL F +ML G++ + TL S+ + +L +G
Sbjct: 532 SEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGR 591
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H G+K ++ + N+++ +Y KCG ++ A ++F M +V+W + IA +
Sbjct: 592 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAY---- 647
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
++ L ++A+ +F ++ S G++PD+YT +SI+ C+ +L++G +H+ +K
Sbjct: 648 --VREGLY-----SDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIK 700
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G S++ V AL+NMY KCG +E A VF ++ + ++SW +MI G++ +SL ++AL+L
Sbjct: 701 NGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALEL 760
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGYFEMMQKEYKIKPVMDH 527
F DM +P+ +T L AC+ + + GYF + H
Sbjct: 761 FLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL-----------H 808
Query: 528 YMC-LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAE 581
C L+DM+ + G + A FD I K D + W+V IAG H GN + +
Sbjct: 809 VACALVDMYAKCGLLVLAQLLFDMIPKKDL----ISWTVMIAGYGMHGFGNEAISTFNEM 864
Query: 582 QLLKLKPKDCESYAMLLDIFVSAG 605
++ ++P D S++++L+ +G
Sbjct: 865 RIAGIEP-DESSFSVILNACSHSG 887
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/686 (32%), Positives = 374/686 (54%), Gaps = 21/686 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKT--GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ LL+ + K+L + IH+H++ T + + L+N Y K + A +FD +
Sbjct: 33 IKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRM 92
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
P NVVSW++L++GY+ N I + DM+ GN P L A+++C + G
Sbjct: 93 PERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEG 152
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q H ++K V N+L S+YS C + A+ +N + +++++ +++ + EN
Sbjct: 153 RQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVEN 212
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G +GL M+SE ++ ++ T + S+C ++ LR+G VH + + V
Sbjct: 213 GYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVS 272
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEAL 373
++I+ +Y KCG A+ +FDG+ N+V W A++A Q NG EAL
Sbjct: 273 SAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQ------------NGCFEEAL 320
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++FSK+ +K + +T++ +L C+ L A G +H + K+GF V+VG AL+NMY
Sbjct: 321 NLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMY 380
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
K G IE A +VF +M R +I+W +MI GF++H L +AL +F+DML A PN VTF
Sbjct: 381 AKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFT 440
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+AC + G+V E Y + K++ ++P ++HY C++ + + G + EA +F++
Sbjct: 441 GVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPV 500
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ + V W + C H N LG + AE +L++ P D +Y +L +I+ RW+ V V
Sbjct: 501 KWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKV 560
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L R++K+ + SWI I + + F D HP + ++ + EL+ K GY
Sbjct: 561 RKLMRDKKIKKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDI 620
Query: 674 SFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
L D E YHSEKLAIA+GLL P + ILV+K+ +C DCH+ +++I+ +
Sbjct: 621 GAVLHDVEDEQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKV 680
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T R I+VRD+ R H F +G C+C D+
Sbjct: 681 TNRVIVVRDANRFHHFRDGRCSCLDY 706
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 144/303 (47%), Gaps = 6/303 (1%)
Query: 32 NHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLS 91
N V+Y S L++ NG G + S+++E K ++V+ C + K L
Sbjct: 197 NDIVAYNSILSSLVE-NGYLRE----GLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLR 251
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
+H ++ + D +V + ++N+YGKCG A+ VFD L NVV WT++++
Sbjct: 252 LGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCF 311
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
QN E A+++F M + T L AC+ L + R G +H + K +
Sbjct: 312 QNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVM 371
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VGN+L ++Y+ G + +A K F+ + +++++W +I +G + L F ML+
Sbjct: 372 VGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAE 431
Query: 272 IQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
PN T T + S CG + ++ G +H L + G L I+ L K G ++EA
Sbjct: 432 EHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEA 491
Query: 331 QKL 333
+
Sbjct: 492 RNF 494
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 369/667 (55%), Gaps = 21/667 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +VK G V L+ +Y G EA VF +P +++SW SL++ +V + +
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ + M+ +G VT +AL AC + + G+ +H VV + +GN+
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+Y G ++ + + ++ ++V++W +IG E+ + + L F M EG+ N
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 276 EFTLTSISSVC---GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
T+ S+ S C G +L G +H+ + G+ S+ V+NS++ +Y KCG + +Q
Sbjct: 463 YITVVSVLSACLLPGDLLER--GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+G+ + N++TWNAM+A +A H G E L + SK+ S G+ D ++FS
Sbjct: 521 LFNGLDNRNIITWNAMLAANAH-----------HGHGEEVLKLVSKMRSFGVSLDQFSFS 569
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
L+ ++L LE+G+Q+H L +K GF D + A +MY KCG I ++ R
Sbjct: 570 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 629
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+L SW +I+ H + F +ML G++P VTFV L ACS+ G+V + L Y+
Sbjct: 630 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 689
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+M+ +++ ++P ++H +C+ID+ R G + EA FI KM +PN+++W +A C+ HGN
Sbjct: 690 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 749
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
++ G AAE L KL+P+D Y + ++F + GRWEDV V+ + + + SW++
Sbjct: 750 LDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 809
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--KQQESFELTDEESAS---VYH 687
+KDKV SF D HPQ+ EI+ L+++ + K GY ++ + TDEE H
Sbjct: 810 LKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNH 869
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LA+A+ L++TP S + + K+ +C DCH+ K ++ + R I++RD R H F G
Sbjct: 870 SERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 929
Query: 748 HCTCRDF 754
C+C+D+
Sbjct: 930 LCSCKDY 936
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 265/533 (49%), Gaps = 23/533 (4%)
Query: 72 VQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
++ SS+V SL+ C S+ + +H + K+G D +V T ++++YG G + +
Sbjct: 54 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 113
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P NVVSWTSL+ GY +PE I ++ M G ++ +++C L
Sbjct: 114 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 173
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ LG+QI VVK E +V NSL S+ + G+++ A F+++ E++ +SW ++
Sbjct: 174 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 233
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +NG + R FS M + N T++++ SV G + + G +H L +K+G+
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 293
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y G EA +F M +L++WN+++A D S
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA------SFVNDGRS---- 343
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL + + SSG + TF+S L C E+G +H L + +G + ++G A
Sbjct: 344 -LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY K G + + RV ++M R +++W ++I G+A +AL F+ M + GV N
Sbjct: 403 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 462
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+T V L+AC G + E + LI M+ + G + + D
Sbjct: 463 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 522
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+D N + W+ +A HG+ E++LKL K S+ + LD F
Sbjct: 523 NGLD-NRNIITWNAMLAANAHHGH-------GEEVLKLVSK-MRSFGVSLDQF 566
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 197/384 (51%), Gaps = 14/384 (3%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G ++ A+ +FD +P N VSW +++SG V+ + F M + G P++
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 178 LGTALTACSSLESI-RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + +TAC S+ R G Q+H +V K D V ++ LY G ++ + K F +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++NV+SWT+++ + GE + + + M EG+ NE +++ + S CG + +G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+ +K G S L V NS++ + G VD A +FD MS + ++WN++ A +AQ
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ-- 238
Query: 357 DLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
NG E+ IFS + + + T S++L++ + + G IH L +
Sbjct: 239 ----------NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K GF S V V L+ MY GR A+ VF +M T+ LISW S++ F N S AL
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 476 LFEDMLLAGVRPNQVTFVGALAAC 499
L M+ +G N VTF ALAAC
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAAC 372
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 237/516 (45%), Gaps = 30/516 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +S ++ C K S I +VK+G V L+++ G GN++
Sbjct: 154 EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 213
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +FD + + +SW S+ + Y QN E + +F M + + T+ T L+
Sbjct: 214 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 273
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ + G+ IH VVK + V N+L +Y+ G A F ++ K+++SW ++
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + +G ++ L M+S G N T TS + C T G +H L + G
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 393
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N + N+++ +Y K G + E++++ M ++V WNA+I G+A+ D K
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK------- 446
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA---LEQGEQIHALTLKTGFLSDVV 424
AL+ F + G+ + T S+L+ C L+ LE+G+ +HA + GF SD
Sbjct: 447 ----ALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEH 500
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +L+ MY KCG + + +F + R +I+W +M+ A+H + L+L M G
Sbjct: 501 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 560
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH----YMCLIDMFVRLGC 540
V +Q +F L+A + ++ E + +K +H + DM+ + G
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-----AVKLGFEHDSFIFNAAADMYSKCGE 615
Query: 541 IEEAFDFIKKMDFEPNEVI--WSVFIAGCRRHGNME 574
I E +K + N + W++ I+ RHG E
Sbjct: 616 IGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 199/407 (48%), Gaps = 14/407 (3%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+++ G V ++ S L C I+H +V +G + + LV++YGK G
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 411
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
M E+++V +PR +VV+W +LI GY ++ P+ A+ F M G +T+ + L+
Sbjct: 412 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 471
Query: 184 AC-SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC + + GK +HAY+V E D V NSL ++Y+ CG L+S+ FN + +N++
Sbjct: 472 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 531
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+W ++ A +G + L+ SKM S G+ ++F+ + S + L G Q+H L
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 591
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG+ + + N+ +Y KCG + E K+ + +L +WN +I+
Sbjct: 592 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA----------- 640
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLS 421
L H E + F ++ G+KP TF S+LT CS +++G + + + G
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+ ++++ + GR+ A +M + + W S++ H
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 747
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL-SNAEIIHAHIVKTGSHQD 108
+ +P ++L + + V EG + VS+L C+ L + +HA+IV G D
Sbjct: 441 DEDPDKALAAFQTMRV--EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 498
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KCG++ +Q +F+ L N+++W ++++ + E + + M
Sbjct: 499 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G + L+A + L + G+Q+H VK E D+ + N+ +YS CG +
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+K +++ SW +I A G +G + F +ML GI+P T S+ + C
Sbjct: 619 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY K GR++ A +F M R +SW +M++G L + ++ F M G++P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 492 FVGALAACSNAGMVYE 507
+ AC +G ++
Sbjct: 61 IASLVTACGRSGSMFR 76
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/665 (33%), Positives = 363/665 (54%), Gaps = 17/665 (2%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
++H ++VK G V L++ Y K +E+A VFD +P+ +++SW S+I G N
Sbjct: 5 VVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNG 64
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ A+ +F+ M G + TL + + AC +G +H Y V+ +TS+GN
Sbjct: 65 LYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGN 124
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +YS C S K F + +KNV+SWT +I + G + F +M EGI+P
Sbjct: 125 ALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRP 184
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ F +TS SL+ G VH I+ G L V N++M +Y+KCG ++EA+ +F
Sbjct: 185 DVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIF 244
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
D ++ + ++WN +I G+ S N EA ++F+++ ++P+ T + I
Sbjct: 245 DHVTKKDTISWNTLIGGY-----------SRSNLANEAFTLFNEMLLQ-LRPNAVTMACI 292
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L + L +LE+G ++HA ++ G+L D V ALV+MY KCG + A R+F ++ + L
Sbjct: 293 LPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNL 352
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISWT MI G+ H A+ LFE M +G++P+ +F L ACS++G+ E +F
Sbjct: 353 ISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNA 412
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ E++I+P + HY C++D+ G ++EA++FI+ M EP+ IW + GCR H N++
Sbjct: 413 MRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVK 472
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AE + +L+P++ Y +L +I+ A RWE V +KN L E SWI ++
Sbjct: 473 LAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVR 532
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSE 689
K + F + HPQ I + LD++ + + G+ ++ + L + A HS
Sbjct: 533 GKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSS 592
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLA+AFG+LN PI V K++ +C CH K I+ + REII+RDS R H F G C
Sbjct: 593 KLAVAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRC 652
Query: 750 TCRDF 754
+CR +
Sbjct: 653 SCRGY 657
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 185/340 (54%), Gaps = 12/340 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ +++ +S++ CV ++H + V+TG + + L+++Y C +
Sbjct: 79 EGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRS 138
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
K+F N+ + NVVSWT++I+ Y + + +F +M G P + +AL A +
Sbjct: 139 TNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAG 198
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
ES++ GK +H Y ++ E+ V N+L +Y CG + A F+ + +K+ +SW T+
Sbjct: 199 NESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTL 258
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG + A + F++ML + ++PN T+ I ++ SL G ++H+ ++ GY
Sbjct: 259 IGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGY 317
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V N+++ +Y+KCG + A++LFD +++ NL++W MIAG+ H
Sbjct: 318 LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGM-----------HG 366
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
G +A+++F ++ SG++PD +FS+IL CS ++G
Sbjct: 367 RGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEG 406
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 186/383 (48%), Gaps = 24/383 (6%)
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G +H Y+VKY +V N+L S Y+ + A+ F+ + +++++SW ++IG C
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG + + F +M EG + + TL S+ C +G VH ++ G S +
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ +Y C K+F M N+V+W AMI + + K
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDK-----------VA 171
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ G++PD++ +S L + +L+ G+ +H ++ G + V AL+ MY
Sbjct: 172 GLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMY 231
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A +F ++ + ISW ++I G++ +L+++A LF +MLL +RPN VT
Sbjct: 232 VKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMA 290
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCI---EEAFDFI 548
L A ++ + EM + + D+++ L+DM+V+ G + FD +
Sbjct: 291 CILPAAASLSSLERGR---EMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDML 347
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
N + W++ IAG HG
Sbjct: 348 TN----KNLISWTIMIAGYGMHG 366
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 369/667 (55%), Gaps = 21/667 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +VK G V L+ +Y G EA VF +P +++SW SL++ +V + +
Sbjct: 373 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 432
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ + M+ +G VT +AL AC + + G+ +H VV + +GN+
Sbjct: 433 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 492
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+Y G ++ + + ++ ++V++W +IG E+ + + L F M EG+ N
Sbjct: 493 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 552
Query: 276 EFTLTSISSVC---GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
T+ S+ S C G +L G +H+ + G+ S+ V+NS++ +Y KCG + +Q
Sbjct: 553 YITVVSVLSACLLPGDLLER--GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 610
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+G+ + N++TWNAM+A +A H G E L + SK+ S G+ D ++FS
Sbjct: 611 LFNGLDNRNIITWNAMLAANAH-----------HGHGEEVLKLVSKMRSFGVSLDQFSFS 659
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
L+ ++L LE+G+Q+H L +K GF D + A +MY KCG I ++ R
Sbjct: 660 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 719
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+L SW +I+ H + F +ML G++P VTFV L ACS+ G+V + L Y+
Sbjct: 720 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 779
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+M+ +++ ++P ++H +C+ID+ R G + EA FI KM +PN+++W +A C+ HGN
Sbjct: 780 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 839
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
++ G AAE L KL+P+D Y + ++F + GRWEDV V+ + + + SW++
Sbjct: 840 LDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 899
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--KQQESFELTDEESAS---VYH 687
+KDKV SF D HPQ+ EI+ L+++ + K GY ++ + TDEE H
Sbjct: 900 LKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNH 959
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LA+A+ L++TP S + + K+ +C DCH+ K ++ + R I++RD R H F G
Sbjct: 960 SERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 1019
Query: 748 HCTCRDF 754
C+C+D+
Sbjct: 1020 LCSCKDY 1026
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 258/533 (48%), Gaps = 48/533 (9%)
Query: 72 VQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
++ SS+V SL+ C S+ + +H + K+G D +V T ++++YG G + +
Sbjct: 169 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 228
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P NVVSWTSL+ GY +PE I ++ D
Sbjct: 229 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD----------------------- 265
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
ES LG+QI VVK E +V NSL S+ + G+++ A F+++ E++ +SW ++
Sbjct: 266 ES--LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 323
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +NG + R FS M + N T++++ SV G + + G +H L +K+G+
Sbjct: 324 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 383
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y G EA +F M +L++WN+++A D S
Sbjct: 384 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA------SFVNDGRS---- 433
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL + + SSG + TF+S L C E+G +H L + +G + ++G A
Sbjct: 434 -LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 492
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY K G + + RV ++M R +++W ++I G+A +AL F+ M + GV N
Sbjct: 493 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 552
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+T V L+AC G + E + LI M+ + G + + D
Sbjct: 553 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 612
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+D N + W+ +A HG+ E++LKL K S+ + LD F
Sbjct: 613 NGLD-NRNIITWNAMLAANAHHGH-------GEEVLKLVSK-MRSFGVSLDQF 656
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 242/529 (45%), Gaps = 40/529 (7%)
Query: 65 VLTEGPKVQTSSYVSLL---------QECVN-RKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
V E P S+ SL+ +E ++ K S I +VK+G V
Sbjct: 231 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENS 290
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++ G GN++ A +FD + + +SW S+ + Y QN E + +F M +
Sbjct: 291 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 350
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T+ T L+ ++ + G+ IH VVK + V N+L +Y+ G A F
Sbjct: 351 STTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFK 410
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ K+++SW +++ + +G ++ L M+S G N T TS + C T
Sbjct: 411 QMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEK 470
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H L + G N + N+++ +Y K G + E++++ M ++V WNA+I G+A+
Sbjct: 471 GRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAE 530
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA---LEQGEQIH 411
D K AL+ F + G+ + T S+L+ C L+ LE+G+ +H
Sbjct: 531 DEDPDK-----------ALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLH 577
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A + GF SD V +L+ MY KCG + + +F + R +I+W +M+ A+H
Sbjct: 578 AYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGE 637
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH---- 527
+ L+L M GV +Q +F L+A + ++ E + +K +H
Sbjct: 638 EVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-----AVKLGFEHDSFI 692
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI--WSVFIAGCRRHGNME 574
+ DM+ + G I E +K + N + W++ I+ RHG E
Sbjct: 693 FNAAADMYSKCGEIGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 738
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 199/407 (48%), Gaps = 14/407 (3%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+++ G V ++ S L C I+H +V +G + + LV++YGK G
Sbjct: 442 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 501
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
M E+++V +PR +VV+W +LI GY ++ P+ A+ F M G +T+ + L+
Sbjct: 502 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 561
Query: 184 AC-SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC + + GK +HAY+V E D V NSL ++Y+ CG L+S+ FN + +N++
Sbjct: 562 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 621
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+W ++ A +G + L+ SKM S G+ ++F+ + S + L G Q+H L
Sbjct: 622 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 681
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG+ + + N+ +Y KCG + E K+ + +L +WN +I+
Sbjct: 682 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA----------- 730
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLS 421
L H E + F ++ G+KP TF S+LT CS +++G + + + G
Sbjct: 731 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 790
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+ ++++ + GR+ A +M + + W S++ H
Sbjct: 791 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 837
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 192/411 (46%), Gaps = 39/411 (9%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ +HA VK L+N+Y K G ++ A+ +FD +P N VSW +++SG
Sbjct: 89 TTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGI 148
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI-RLGKQIHAYVVKYQTEDD 209
V+ + F M + G P++ + + +TAC S+ R G Q+H +V K D
Sbjct: 149 VRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSD 208
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V ++ LY G ++ + K F + ++NV+SWT+++ + GE
Sbjct: 209 VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE------------- 255
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
P E V +G Q+ +K G S L V NS++ + G VD
Sbjct: 256 ----PEE--------VIDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 303
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDL 388
A +FD MS + ++WN++ A +AQ NG E+ IFS + + +
Sbjct: 304 ANYIFDQMSERDTISWNSIAAAYAQ------------NGHIEESFRIFSLMRRFHDEVNS 351
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T S++L++ + + G IH L +K GF S V V L+ MY GR A+ VF +
Sbjct: 352 TTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQ 411
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
M T+ LISW S++ F N S AL L M+ +G N VTF ALAAC
Sbjct: 412 MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 462
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL-SNAEIIHAHIVKTGSHQD 108
+ +P ++L + + V EG + VS+L C+ L + +HA+IV G D
Sbjct: 531 DEDPDKALAAFQTMRV--EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 588
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KCG++ +Q +F+ L N+++W ++++ + E + + M
Sbjct: 589 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 648
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G + L+A + L + G+Q+H VK E D+ + N+ +YS CG +
Sbjct: 649 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 708
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+K +++ SW +I A G +G + F +ML GI+P T S+ + C
Sbjct: 709 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 766
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P++ F I S++ G +HAL +K V+ L+NMY K GR++ A +
Sbjct: 72 PEISCFDQIGF--SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHL 129
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F M R +SW +M++G L + ++ F M G++P+ + AC +G +
Sbjct: 130 FDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSM 189
Query: 506 YE 507
+
Sbjct: 190 FR 191
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 243/746 (32%), Positives = 398/746 (53%), Gaps = 31/746 (4%)
Query: 39 RSGSKLIQLNGNSEPVRSLGF-QEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNA 93
RS L LN S G +EA+ +L G ++ +L C +
Sbjct: 91 RSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEG 150
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
+H +VK G +D F+ L++ Y +CG+M+ KVF+ + NVVSWTSLI GY +
Sbjct: 151 IQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARG 210
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+P+ A+ +F +M+EAG P++VT+ ++AC+ L + +G+++ AY+ + + + +
Sbjct: 211 DRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV 270
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L +Y CG++++A + F+ ++N++ + T++ G A + L +ML +G +
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ T+ S S ++ L G H I+ G + N I+ +Y+KCG + A ++
Sbjct: 331 PDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRV 390
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAK-----DDLSAHNG---------------GTEAL 373
FD MS+ +V+WN++ AG + D+ + + N +A+
Sbjct: 391 FDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAI 450
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ G+K D T I + C L A E + +H K G D+ + TALV+M+
Sbjct: 451 ELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMF 510
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+CG + A +VF +M+ R + +WT+ I A A LF ML+ GV+P+ V FV
Sbjct: 511 ARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFV 570
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L ACS+ G V + L F +M+ ++ I P ++HY C++D+ R G + EAFD IK M
Sbjct: 571 QVLTACSHGGQVEQGLHIFSLME-DHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPM 629
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EPN+V+W +A CR H N+E+ YAAE++ +L P+ + +L +I+ SAG+W DVA V
Sbjct: 630 EPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARV 689
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ RE+ + + S +++ ++ F D HP+ I +L E+ + G+
Sbjct: 690 RLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDL 749
Query: 674 SFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
S L D +E Y HSEKLAIAFGL+ T PI VVK+ MC DCH+F K+ + +
Sbjct: 750 SNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASII 809
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD+ R H F G C+C D+
Sbjct: 810 YNREIIVRDNNRFHFFRQGLCSCCDY 835
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/543 (28%), Positives = 252/543 (46%), Gaps = 56/543 (10%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---AQKVFDNLPRINVVS-- 142
K+L+ + +H I K G Q +T LVN + + E A+K F+ L + +V S
Sbjct: 36 KTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFE-LFKEDVRSDD 94
Query: 143 ----WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
SLI GY AI +++ ML G P + T L+ C+ + + G Q+H
Sbjct: 95 ALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVH 154
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
VVK E+D + N L Y+ CG ++ K F + E+NV+SWT++I
Sbjct: 155 GSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPK 214
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F +M+ GI+P+ T+ + S C + L +G +V + +LG N + N+++
Sbjct: 215 EAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALV 274
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y+KCG +D A++LFD NLV +N +++ +A+ LA+ EAL+I +
Sbjct: 275 DMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYAR-QGLAR----------EALAILDE 323
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G +PD T S ++ ++LV L G+ H ++ G +G +++MY KCG+
Sbjct: 324 MLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGK 383
Query: 439 IERASRVFVEMSTRTLISWTS-------------------------------MITGFANH 467
E A RVF MS +T++SW S MI+G
Sbjct: 384 PEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQK 443
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
SL A++LF +M G++ ++VT +G +AC G E + ++ I M
Sbjct: 444 SLFEDAIELFREMQGEGIKADRVTMMGIASACGYLG-APELAKWVHTYIEKNGIPCDMRL 502
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLK 585
L+DMF R G + A KM E + W+ I GN E G + +
Sbjct: 503 NTALVDMFARCGDPQSAMQVFNKMT-ERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQG 561
Query: 586 LKP 588
+KP
Sbjct: 562 VKP 564
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 245/733 (33%), Positives = 390/733 (53%), Gaps = 70/733 (9%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+ + C N SLS +HA + ++G + FV +V++YGKCG + A +FD+L
Sbjct: 265 VFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRG 324
Query: 140 V---VSWTSLISGYVQNSQPELAIHVFLDMLEAG-NYPTNVTLGTALTACSSLESIRLGK 195
+ VSW S++S Y+ S A+ +F M P ++L L AC+SL + G+
Sbjct: 325 IQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGR 384
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW----------- 244
Q+H + ++ DD VGN++ +Y+ CG + A K F R++ K+V+SW
Sbjct: 385 QVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAG 444
Query: 245 ------------------------TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
T VI + G+ + L F +M G +PN TL
Sbjct: 445 RLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLV 504
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKL--------GYASNLRVRNSIMYLYLKCGLVDEAQK 332
S+ S C ++ +L G + H IK A +L+V N ++ +Y KC + A+K
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARK 564
Query: 333 LFDGMS--HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS---KLNSSGMKPD 387
+FD +S ++VTW MI G+AQ H AL +FS K++ S +KP+
Sbjct: 565 MFDSVSPKDRDVVTWTVMIGGYAQ-----------HGDANNALQLFSGMFKMDKS-IKPN 612
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV-VGTALVNMYKKCGRIERASRVF 446
+T S L C+RL AL G Q+HA L+ + S ++ V L++MY K G ++ A VF
Sbjct: 613 DFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVF 672
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
M R +SWTS++TG+ H AL++F++M + P+ +TF+ L ACS++GMV
Sbjct: 673 DNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVD 732
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ +F M K++ + P +HY C++D++ R G + EA I +M EP V+W ++
Sbjct: 733 HGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR H N+ELG +AA +LL+L+ + SY +L +I+ +A RW+DVA ++ + + +
Sbjct: 793 CRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRP 852
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL---TDEESA 683
SWI+ + V +F D HPQS +I++ L +L+++ K GY Q SF L DEE
Sbjct: 853 GCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKG 912
Query: 684 SVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
+ HSEKLA+A+G+L +PI + K+ +C DCH+ I I+ + EII+RDS R
Sbjct: 913 DLLFEHSEKLALAYGILTLHPRAPIRITKNLRICGDCHSAITYISKIIEHEIILRDSSRF 972
Query: 742 HKFVNGHCTCRDF 754
H F NG C+C+ +
Sbjct: 973 HHFKNGSCSCKGY 985
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 213/443 (48%), Gaps = 61/443 (13%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S V++L C + + +H +++G D FV +V++Y KCG MEEA KVF +
Sbjct: 366 SLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM 425
Query: 136 P-----------------------------------RINVVSWTSLISGYVQNSQPELAI 160
++VV+WT++I+GY Q Q A+
Sbjct: 426 KFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEAL 485
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY--------QTEDDTSV 212
VF M + G+ P VTL + L+AC S+ ++ GK+ H Y +K+ DD V
Sbjct: 486 DVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKV 545
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKM--L 268
N L +Y+ C S A K F+ + ++++V++WT +IG ++G+A L+ FS M +
Sbjct: 546 INGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKM 605
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS-NLRVRNSIMYLYLKCGLV 327
+ I+PN+FTL+ C + +LR G QVH+ ++ Y S L V N ++ +Y K G V
Sbjct: 606 DKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDV 665
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
D AQ +FD M N V+W +++ G+ H G +AL +F ++ + PD
Sbjct: 666 DTAQIVFDNMPQRNAVSWTSLMTGYGM-----------HGRGEDALRVFDEMRKVPLVPD 714
Query: 388 LYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
TF +L CS ++ G + ++ G +V+++ + GR+ A ++
Sbjct: 715 GITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLI 774
Query: 447 VEMSTR-TLISWTSMITGFANHS 468
EM T + W ++++ HS
Sbjct: 775 NEMPMEPTPVVWVALLSACRLHS 797
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 256/553 (46%), Gaps = 52/553 (9%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
++ L+EC SL++A+++H + G F + T L+ Y + A + + LP
Sbjct: 165 ITALKEC---NSLAHAKLLHQQSIMQG--LLFHLATNLIGTYIASNSTAYAILLLERLPP 219
Query: 138 I--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+V W LI + P ++ M G P + T AC++L S+ LG
Sbjct: 220 SPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGA 279
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---MSWTTVIGACG 252
+HA V + + V N++ S+Y CG+L A F+ + + + +SW +V+ A
Sbjct: 280 SLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYM 339
Query: 253 ENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+A L F KM + + P+ +L +I C ++ + G QVH I+ G ++
Sbjct: 340 WASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDV 399
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK-----DDLSAH 366
V N+++ +Y KCG ++EA K+F M ++V+WNAM+ G++Q L + ++
Sbjct: 400 FVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEE 459
Query: 367 N-------------------GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
N G EAL +F ++ G +P++ T S+L+ C + AL G
Sbjct: 460 NIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHG 519
Query: 408 EQIHALTLKTGFL----------SDVVVGTALVNMYKKCGRIERASRVFVEMST--RTLI 455
++ H +K F+ D+ V L++MY KC E A ++F +S R ++
Sbjct: 520 KETHCYAIK--FILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVV 577
Query: 456 SWTSMITGFANHSLSHQALQLFEDM--LLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+WT MI G+A H ++ ALQLF M + ++PN T AL AC+ +
Sbjct: 578 TWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHA 637
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+ + + ++ CLIDM+ + G ++ A M + N V W+ + G HG
Sbjct: 638 YVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMHGRG 696
Query: 574 ELGFYAAEQLLKL 586
E +++ K+
Sbjct: 697 EDALRVFDEMRKV 709
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 209/477 (43%), Gaps = 95/477 (19%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDT---SVGNSLCSLYSTCGSLNSAIKAFNRI 236
TAL C+SL HA ++ Q+ + +L Y S AI R+
Sbjct: 166 TALKECNSLA--------HAKLLHQQSIMQGLLFHLATNLIGTYIASNSTAYAILLLERL 217
Query: 237 --REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+V W +I G + +M S G P+ +T + C + SL +
Sbjct: 218 PPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSL 277
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV---NLVTWNAMIAG 351
GA +H+ + G+ASN+ V N+++ +Y KCG + A +FD + H +LV+WN++++
Sbjct: 278 GASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSA 337
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQI 410
+ D AL++F K+ + M PD+ + +IL C+ L A +G Q+
Sbjct: 338 YMWASD-----------ANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQV 386
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN---- 466
H ++++G + DV VG A+V+MY KCG++E A++VF M + ++SW +M+TG++
Sbjct: 387 HGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRL 446
Query: 467 -HSLSH------------------------------QALQLFEDMLLAGVRPNQVTFVGA 495
H+LS +AL +F M G RPN VT V
Sbjct: 447 EHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSL 506
Query: 496 LAACSNAGMVYEALGYFEMMQKE---YKIK---------PVMDHYMC---LIDMFVRLGC 540
L+AC + G + KE Y IK P D LIDM+ +
Sbjct: 507 LSACVSVGALLHG--------KETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQS 558
Query: 541 IEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL----KPKD 590
E A FD + D + V W+V I G +HG+ + K+ KP D
Sbjct: 559 TEVARKMFDSVSPKD--RDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPND 613
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 150/310 (48%), Gaps = 19/310 (6%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK--------TGSHQD 108
EAL V + G + + VSLL CV+ +L + + H + +K D
Sbjct: 483 EALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADD 542
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNL-PR-INVVSWTSLISGYVQNSQPELAIHVFLDM 166
V+ L+++Y KC + E A+K+FD++ P+ +VV+WT +I GY Q+ A+ +F M
Sbjct: 543 LKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM 602
Query: 167 --LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTC 223
++ P + TL AL AC+ L ++R G+Q+HAYV++ + V N L +YS
Sbjct: 603 FKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKS 662
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G +++A F+ + ++N +SWT+++ G +G LR F +M + P+ T +
Sbjct: 663 GDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVL 722
Query: 284 SVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVN 341
C + G + + G ++ L+ + G + EA KL + M
Sbjct: 723 YACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPT 782
Query: 342 LVTWNAMIAG 351
V W A+++
Sbjct: 783 PVVWVALLSA 792
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 241/734 (32%), Positives = 387/734 (52%), Gaps = 86/734 (11%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVN 117
+EA+ L + SY LL +CV + A+ + H+ + D F+ L++
Sbjct: 7 LREAIDALYSRGTANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLH 66
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE-------------------- 157
+Y K GN+ +A+ +FD + R +V SW +++S Y ++ E
Sbjct: 67 LYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAVSYNTV 126
Query: 158 -----------LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
A+ F+ M E G T+ T + L ACS L I+ GKQIH +V
Sbjct: 127 IAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSL 186
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ V N+L ++Y+ CG+L+ A F+R+ KNV+SW ++I +NG+ + F +
Sbjct: 187 GESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCE 246
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M S G+ P++ T+++I S Y +CG
Sbjct: 247 MQSSGLMPDQVTISNILSA-----------------------------------YFQCGY 271
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMK 385
+DEA K F + + V W M+ G AQ NG E AL +F ++ ++
Sbjct: 272 IDEACKTFREIKEKDKVCWTTMMVGCAQ------------NGKEEDALLLFREMLLENVR 319
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
PD +T SS+++ C+RL +L QG+ +H + G D++V +ALV+MY KCG A V
Sbjct: 320 PDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIV 379
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F M TR +ISW SMI G+A + +AL L+E+ML ++P+ +TFVG L+AC +AG+V
Sbjct: 380 FKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLV 439
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
GYF + K + + P DHY C+I++ R G +++A D IK M FEPN +IWS ++
Sbjct: 440 ERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
CR + ++ G AA L +L P + Y ML +I+ + GRW+DVA V++L + K+ +
Sbjct: 500 VCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKF 559
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EE 681
+SWI I ++V+ F D H ++ +I++ L+ L++K + G+ + L D E+
Sbjct: 560 AAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEK 619
Query: 682 SASV-YHSEKLAIAFGLLNTPI-VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
S+ YHSEKLA+AF L+ P +PI ++K+ +C DCH F+K ++ + R II+RD
Sbjct: 620 FDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDIN 679
Query: 740 RLHKFVNGHCTCRD 753
R H F+ G C+C+D
Sbjct: 680 RFHHFIEGRCSCKD 693
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 383/719 (53%), Gaps = 58/719 (8%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK--------- 130
LL+ C+ + LS + +H+ +K+ + + +Y KCG + A+K
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 131 ----------------------VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+FD +P ++VS+ +LIS Y + A+ +F M E
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G TL +TAC + + L Q+H+ V + SV N+L + Y G L+
Sbjct: 134 MGLDMDGFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 229 AIKAF---NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
A + F IR++ +SW ++I A G++ E + L F +M+ G+ + FTL S+ +
Sbjct: 192 AKRVFYGMGGIRDE--VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKLFDGMSHVNLVT 344
+ L G Q H IK G+ N V + ++ LY KCG + + +K+F+ ++ +LV
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN M++G++Q + +D AL F ++ G +P+ +F +++ CS L +
Sbjct: 310 WNTMVSGYSQNEEFLED----------ALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359
Query: 405 EQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
QG+QIH+L LK+ S+ + V AL+ MY KCG ++ A R+F M+ +S SMI G
Sbjct: 360 SQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAG 419
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+A H + ++L LF+ ML + P +TF+ L+AC++ G V E YF MM++++ I+P
Sbjct: 420 YAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEP 479
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+HY C+ID+ R G + EA + I +M F P + W+ + CR HGN+EL AA Q+
Sbjct: 480 EAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV 539
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
L+L+P + Y +L +++ SAGRWE+VA V+ R+ + + SWI +K +++ F
Sbjct: 540 LQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAE 599
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS--------VYHSEKLAIAF 695
D HP EI++ L+E+ K K GY + L ++ +HSEKLA+AF
Sbjct: 600 DSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAF 659
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GL++T P+LVVK+ +C DCHN IK I+++ REI VRD+ R H F G C+C D+
Sbjct: 660 GLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDY 718
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 42 SKLIQLNGNSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
S ++ + E ++LG FQE ++ G V + S+L + LS H +
Sbjct: 210 SMIVAYGQHQEGSKALGLFQE---MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQL 266
Query: 101 VKTGSHQDFFVMTFLVNVYGKC-GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PEL 158
+KTG HQ+ V + L+++Y KC G M + +KVF+ + ++V W +++SGY QN + E
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSLC 217
A+ F M G P + + ++ACS+L S GKQIH+ +K + SV N+L
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
++YS CG+L A + F+R+ E N +S ++I ++G ++ L F ML I P
Sbjct: 387 AMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSI 446
Query: 278 TLTSISSVC 286
T S+ S C
Sbjct: 447 TFISVLSAC 455
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L F +L C L G+ +H+L +K+ + +Y KCGR+ A + F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
++S + S+ ++I +A S A QLF+ + P+ V++ ++A ++ G
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAP 123
Query: 508 ALGYFEMMQK 517
ALG F M++
Sbjct: 124 ALGLFSGMRE 133
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 385/683 (56%), Gaps = 22/683 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C S+ +IIH I K G +D V L+++Y K + + +++FD +
Sbjct: 280 SVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLR 339
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ VSW ++I GY Q E +I +F++M+ P +T+ + L AC L + GK +H
Sbjct: 340 DAVSWNTMICGYSQVGLYEESIKLFMEMVNQFK-PDLLTITSILQACGHLGDLEFGKYVH 398
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
Y++ E DT+ N L ++Y+ CG+L ++ + F+ ++ K+ +SW ++I +NG
Sbjct: 399 DYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD 458
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ ++ F KM+ ++P+ T + S+ + L +G ++H K+G+ SN+ V N+++
Sbjct: 459 EAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLV 517
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGTEALSIF 376
+Y KCG + ++ K+F+ M +++TWN +IA H++ +L L +
Sbjct: 518 DMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG-------------LRMI 564
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
S++ + G+ PD+ T SIL +CS L A QG++IH K G SDV VG L+ MY KC
Sbjct: 565 SRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC 624
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + + +VF M T+ +++WT++I+ + +A++ F +M AG+ P+ V FV +
Sbjct: 625 GSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAII 684
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS++G+V E L YF M+K+YKI+P ++HY C++D+ R +++A DFI M +P+
Sbjct: 685 FACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPD 744
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
IW ++ CR G+ E+ +E++++L P D Y ++ +++ + G+W+ V ++
Sbjct: 745 SSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYAALGKWDQVRSIRKS 804
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+ L + SW+ I++KVY F Q E+ K+L L GY F
Sbjct: 805 IKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFV 864
Query: 677 LTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E + HSE+LAIAFGLLNT +P+ V+K+ +C DCH K I+ + R
Sbjct: 865 LHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQR 924
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
E++VRD+ R H F +G C+C D+
Sbjct: 925 ELLVRDANRFHVFKDGACSCGDY 947
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/523 (28%), Positives = 260/523 (49%), Gaps = 31/523 (5%)
Query: 59 FQEALSVLTEGPKVQ----TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EALS+ +E +++ T ++ S++ C A+ IH ++ G D ++
Sbjct: 155 FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNA 214
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y + ++++A+KVF+ +P +VVSW SLISGY N A+ ++ G P
Sbjct: 215 LIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPD 274
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T+ + L AC L S+ G IH + K + D V N L S+Y L + F+
Sbjct: 275 SYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFD 334
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ ++ +SW T+I + G + ++ F +M+++ +P+ T+TSI CG + L
Sbjct: 335 KMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEF 393
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G VH I GY + N ++ +Y KCG + +Q++F GM + V+WN+MI + Q
Sbjct: 394 GKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQ 453
Query: 355 MMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG EA+ +F K+ + +KPD T+ +L++ ++L L G+++H
Sbjct: 454 ------------NGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCD 500
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
K GF S++VV LV+MY KCG + + +VF M R +I+W ++I + +
Sbjct: 501 LAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLG 560
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L++ M GV P+ T + L CS G + ++ + + V
Sbjct: 561 LRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNV---- 616
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI+M+ + G + +F K M + + V W+ I+ C +G
Sbjct: 617 --LIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYG 656
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 230/487 (47%), Gaps = 24/487 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD-NLPRINVVSWTSLISGYVQNS 154
+H+ I+ G H L+ Y + + VF P NV W S+I N
Sbjct: 94 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNG 153
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
A+ ++ + P T + + AC+ L + K IH V+ D +GN
Sbjct: 154 LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGN 213
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L +Y L+ A K F + ++V+SW ++I NG + L + + + G+ P
Sbjct: 214 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVP 273
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC-GLVDEAQKL 333
+ +T++S+ CG + S+ G +H L K+G ++ V N ++ +Y K GL+D +++
Sbjct: 274 DSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLID-GRRI 332
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M + V+WN MI G++Q+ E++ +F ++ + KPDL T +S
Sbjct: 333 FDKMVLRDAVSWNTMICGYSQV-----------GLYEESIKLFMEMVNQ-FKPDLLTITS 380
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL C L LE G+ +H + +G+ D L+NMY KCG + + VF M +
Sbjct: 381 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 440
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG--- 510
+SW SMI + + +A++LF+ M+ V+P+ VT+V L+ + G + LG
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDL--XLGKEL 497
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ ++ + + V+ + L+DM+ + G + ++ + M + + W+ IA C
Sbjct: 498 HCDLAKMGFNSNIVVSN--TLVDMYAKCGEMGDSLKVFENMKAR-DIITWNTIIASCVHS 554
Query: 571 GNMELGF 577
+ LG
Sbjct: 555 EDCNLGL 561
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 120/231 (51%), Gaps = 3/231 (1%)
Query: 59 FQEALSV---LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
F EA+ + + K + +YV LL L + +H + K G + + V L
Sbjct: 457 FDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTL 516
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KCG M ++ KVF+N+ ++++W ++I+ V + L + + M G P
Sbjct: 517 VDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM 576
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ + L CS L + R GK+IH + K E D VGN L +YS CGSL ++ + F
Sbjct: 577 ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKL 636
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
++ K+V++WT +I ACG GE + +R F +M + GI P+ +I C
Sbjct: 637 MKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFAC 687
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+LG + + TEG ++ +S+L C + + IH I K G D V L
Sbjct: 558 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 617
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG++ + +VF + +VV+WT+LIS + + A+ F +M AG P +
Sbjct: 618 IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH 677
Query: 176 VTLGTALTACS 186
V + ACS
Sbjct: 678 VAFVAIIFACS 688
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 20/215 (9%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEM 449
FSSI + Q ++H+L + G V+ L+ Y + VF +
Sbjct: 75 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 134
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ + W S+I ++ L +AL L+ + ++P+ TF + AC AG++
Sbjct: 135 PSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLL---- 188
Query: 510 GYFEMMQKEYKIKPVM----DHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
FEM + + M D Y+ LIDM+ R +++A ++M + V W+
Sbjct: 189 -DFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 246
Query: 564 IAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAM 596
I+G +G N L Y + L + P +SY M
Sbjct: 247 ISGYNANGYWNEALEIYYRFRNLGVVP---DSYTM 278
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 383/719 (53%), Gaps = 58/719 (8%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK--------- 130
LL+ C+ + LS + +H+ +K+ + + +Y KCG + A+K
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 131 ----------------------VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+FD +P ++VS+ +LIS Y + A+ +F M E
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G TL +TAC + + L Q+H+ V + SV N+L + Y G L+
Sbjct: 134 MGLDMDXFTLSAVITACC--DDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 229 AIKAF---NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
A + F IR++ +SW ++I A G++ E + L F +M+ G+ + FTL S+ +
Sbjct: 192 AKRVFYGMGGIRDE--VSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTA 249
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKLFDGMSHVNLVT 344
+ L G Q H IK G+ N V + ++ LY KCG + + +K+F+ ++ +LV
Sbjct: 250 FTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVL 309
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN M++G++Q + +D AL F ++ G +P+ +F +++ CS L +
Sbjct: 310 WNTMVSGYSQNEEFLED----------ALECFRQMQGIGYRPNDCSFVCVISACSNLSSP 359
Query: 405 EQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
QG+QIH+L LK+ S+ + V AL+ MY KCG ++ A R+F M+ +S SMI G
Sbjct: 360 SQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAG 419
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+A H + ++L LF+ ML + P +TF+ L+AC++ G V E YF MM++++ I+P
Sbjct: 420 YAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEP 479
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+HY C+ID+ R G + EA + I +M F P + W+ + CR HGN+EL AA Q+
Sbjct: 480 EAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQV 539
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
L+L+P + Y +L +++ SAGRWE+VA V+ R+ + + SWI +K +++ F
Sbjct: 540 LQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAE 599
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS--------VYHSEKLAIAF 695
D HP EI++ L+E+ K K GY + L ++ +HSEKLA+AF
Sbjct: 600 DSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAF 659
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GL++T P+LVVK+ +C DCHN IK I+++ REI VRD+ R H F G C+C D+
Sbjct: 660 GLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCFKEGQCSCGDY 718
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 131/249 (52%), Gaps = 7/249 (2%)
Query: 42 SKLIQLNGNSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
S ++ + E ++LG FQE ++ G V + S+L + LS H +
Sbjct: 210 SMIVAYGQHQEGSKALGLFQE---MVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQL 266
Query: 101 VKTGSHQDFFVMTFLVNVYGKC-GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PEL 158
+KTG HQ+ V + L+++Y KC G M + +KVF+ + ++V W +++SGY QN + E
Sbjct: 267 IKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLED 326
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSLC 217
A+ F M G P + + ++ACS+L S GKQIH+ +K + SV N+L
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
++YS CG+L A + F+R+ E N +S ++I ++G ++ L F ML I P
Sbjct: 387 AMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSI 446
Query: 278 TLTSISSVC 286
T S+ S C
Sbjct: 447 TFISVLSAC 455
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L F +L C L G+ +H+L +K+ + +Y KCGR+ A + F
Sbjct: 8 LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
++S + S+ ++I +A S A QLF+ + P+ V++ ++A ++ G
Sbjct: 68 DISDPNVFSFNAIIAAYAKESRPLIAHQLFDQI----PEPDLVSYNTLISAYADCGETAP 123
Query: 508 ALGYFEMMQK 517
ALG F M++
Sbjct: 124 ALGLFSGMRE 133
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/703 (32%), Positives = 387/703 (55%), Gaps = 21/703 (2%)
Query: 59 FQEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL +L G + ++ S+L+ C L +HAH+V+ D V+
Sbjct: 116 FDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNA 175
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCG++ A+ +FD +P + +SW ++ISGY +N + + +F M E P
Sbjct: 176 LITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPD 235
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ + ++AC L RLG Q+H+YVV+ + + SV NSL +Y + G A F+
Sbjct: 236 LMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFS 295
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++V+SWTT+I C +N + L + M G P+E T+ S+ S C ++ L +
Sbjct: 296 GMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDM 355
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++H L + G+ + V NS++ +Y KC +++A ++F + ++++W ++I G
Sbjct: 356 GMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVING--- 412
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L +N EAL F K+ KP+ T S L+ C+R+ AL G++IHA
Sbjct: 413 --------LRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGALMCGKEIHAHA 463
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
LK G D + A++++Y +CGR+ A F ++ + + +W ++TG+A +
Sbjct: 464 LKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLNEKDVGAWNILLTGYAQKGKGAMVM 522
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LF+ M+ + + P+ VTF+ L ACS +GMV E L YF+ M+ Y I P + HY C++D+
Sbjct: 523 ELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDL 582
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G + EA +FI++M +P+ IW + CR H ++ LG AA+ + K + Y
Sbjct: 583 LGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYY 642
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ +G+W++VA V+ +EE L SW+ +K KV++F D HPQ EI
Sbjct: 643 ILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEIN 702
Query: 655 KVLDELVEKAKCFGYKQQE--SFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVK 710
VL+ EK K G+ QE S + A ++ HSE+ AIA+ L+N+ PI V K
Sbjct: 703 VVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTK 762
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
+ MC+ CH+ +K I+ + REI VRD+++ H F +G C+C D
Sbjct: 763 NLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/541 (28%), Positives = 283/541 (52%), Gaps = 34/541 (6%)
Query: 40 SGSKLIQL--NGNSE-PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEII 96
+ S+L+QL +GN E ++ L + + + V+ +V+L++ C N++ S E +
Sbjct: 1 TNSRLLQLCLSGNLEQALKHLASMQEVKI-----PVEEDCFVALIRLCENKRGYSEGEYV 55
Query: 97 HAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
++ + + + L++++ + G++ A VF + ++ SW L+ GY +
Sbjct: 56 WKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGF 115
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ A+ ++ +L AG P T + L +C+ + G+++HA+VV++ + D V N+
Sbjct: 116 FDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNA 175
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L ++Y CG + SA F+++ ++ +SW +I EN E ++GL F +M I P+
Sbjct: 176 LITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPD 235
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T+TS+ S C + R+G Q+HS ++ Y N+ V NS++ +YL G EA+ +F
Sbjct: 236 LMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFS 295
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
GM ++V+W +I+G +L D +AL + + +G PD T +S+L
Sbjct: 296 GMECRDVVSWTTIISGCVD--NLLPD---------KALETYKTMEITGTMPDEVTIASVL 344
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ C+ L L+ G ++H L +TG + VVV +L++MY KC RIE+A +F ++ + +I
Sbjct: 345 SACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVI 404
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWTS+I G ++ +AL F M+L +PN VT + AL+AC+ G + + E+
Sbjct: 405 SWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACARVGAL---MCGKEIH 460
Query: 516 QKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEV---IWSVFIAGCRRH 570
K D ++ ++D++VR G + A + F NE W++ + G +
Sbjct: 461 AHALKAGMGFDGFLPNAILDLYVRCGRMRTALN-----QFNLNEKDVGAWNILLTGYAQK 515
Query: 571 G 571
G
Sbjct: 516 G 516
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/697 (32%), Positives = 387/697 (55%), Gaps = 60/697 (8%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
++ K G + +A+ VF +P + VSWT ++ G + + AI LDM G PT T
Sbjct: 1 MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L L++C+ ++ +G+++H++VVK V NS+ ++Y CG +A F R+
Sbjct: 61 LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120
Query: 238 -------------------------------EKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+++++SW +I +NG + L+ FS+
Sbjct: 121 VRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSR 180
Query: 267 MLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
ML E + P+EFT+TS+ S C + ++R+G QVH+ ++ A N +V N+++ Y K G
Sbjct: 181 MLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSG 240
Query: 326 LVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDL--AKD--------DLSA-------- 365
V+ A+++ D + +N++++ A++ G+ ++ D+ A++ D+ A
Sbjct: 241 SVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGY 300
Query: 366 -HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
NG EA+ +F + + G +P+ YT +++L++C+ L L+ G+QIH +++
Sbjct: 301 EQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSS 360
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDMLL 482
V A++ MY + G A R+F ++ R I+WTSMI A H +A+ LFE+ML
Sbjct: 361 SVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
AGV P+++T+VG L+ACS+AG V E Y++ ++ E++I P M HY C++D+ R G
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA +FI++M EP+ + W ++ CR H N EL AAE+LL + P + +Y+ + +++
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
+ GRW D A + +E+ + + +SW I+ K++ F +D +HPQ ++ + + E
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWE 600
Query: 663 KAKCFGYK---QQESFELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
+ K G+ Q ++ DE E HSEKLAIAFGL++TP + + V+K+ +C D
Sbjct: 601 EIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVCND 660
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH IK I+ +T REIIVRD+ R H F +G C+C+D+
Sbjct: 661 CHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDY 697
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 129/540 (23%), Positives = 244/540 (45%), Gaps = 91/540 (16%)
Query: 55 RSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ F EA+ L +G + ++L C ++ + +H+ +VK G
Sbjct: 35 RAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVP 94
Query: 111 VMTFLVNVYGKCGN-------------------------------MEEAQKVFDNLPRIN 139
V ++N+YGKCG+ M+ A+ +F+++P +
Sbjct: 95 VANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRS 154
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VSW ++I+GY QN A+ +F ML E+ P T+ + L+AC++L ++R+GKQ+H
Sbjct: 155 IVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVH 214
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGS--------------------------------- 225
AY+++ + ++ V N+L S Y+ GS
Sbjct: 215 AYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 274
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ SA + F + ++V++WT +I +NG + + F M++ G +PN +TL ++ SV
Sbjct: 275 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 334
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
C ++ L G Q+H I+ + V N+I+ +Y + G A+++FD + +T
Sbjct: 335 CASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT 394
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
W +MI AQ H G EA+ +F ++ +G++PD T+ +L+ CS +
Sbjct: 395 WTSMIVALAQ-----------HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 443
Query: 405 EQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMIT 462
+G++ + + + ++ +V++ + G A M I+W S+++
Sbjct: 444 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 503
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
H + A E +L + PN GA +A +N VY A G + + +K +
Sbjct: 504 ACRVHKNAELAELAAEKLL--SIDPNN---SGAYSAIAN---VYSACGRWSDAARIWKAR 555
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 198/419 (47%), Gaps = 68/419 (16%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTF--LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
S+ NA I ++T D V++F L+ Y K G+ME A+++F + +VV+WT++
Sbjct: 241 SVENARRIMDQSMET----DLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAM 296
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
I GY QN + + AI +F M+ G P + TL L+ C+SL + GKQIH ++
Sbjct: 297 IVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLL 356
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFS 265
E +SV N++ ++Y+ GS A + F+++ K ++WT++I A ++G+ + + F
Sbjct: 357 EQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFE 416
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+ML G++P+ T + S C G
Sbjct: 417 EMLRAGVEPDRITYVGVLSACS-----------------------------------HAG 441
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
V+E ++ +D + + + + ++ +A M+DL L+ +EA ++ ++
Sbjct: 442 FVNEGKRYYDQIKNEHQIA--PEMSHYACMVDL----LARAGLFSEAQEFIRRMP---VE 492
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
PD + S+L+ C R+ + ++ A L + ++ +A+ N+Y CGR A+R+
Sbjct: 493 PDAIAWGSLLSAC-RVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARI 551
Query: 446 F---VEMSTR--TLISWT---SMITGFANHSLSH--------QALQLFEDMLLAGVRPN 488
+ E + R T SWT S I F + H A +++E++ AG P+
Sbjct: 552 WKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPD 610
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/665 (33%), Positives = 373/665 (56%), Gaps = 17/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH H++K G + V LV+ Y K + A ++F ++ + V++ SL++GY
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E AI +FL++ +G P++ T L+A L+ + G+Q+H +V+K + VGN+
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L YS ++ K F + E + +S+ VI + NG+ + F K+
Sbjct: 282 LLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+F ++ S+ + L+LR+G Q+H I +G RV N+++ +Y KC EAQK+FD
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
++ + V W AMI+ + Q E +++FS + +G+ D TF+SIL
Sbjct: 402 NIACKSTVPWTAMISAYVQ-----------KGKHEEGINVFSDMRRTGVPADQATFASIL 450
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ L ++ G Q+H+L +++GF+S+V G+AL++ Y KCG + A + F EM R +
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSV 510
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW ++I+ +A + L F+ M+ +G +P+ V+F+ L+ACS+ G V EAL +F M
Sbjct: 511 SWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSM 570
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ Y++ P +HY ++D+ R G +EA + +M FEP+E++WS + CR H N EL
Sbjct: 571 TQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHEL 630
Query: 576 GFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
AA++L ++ +D Y + +I+ AG+W++VA VK R+ + + +SW+ IK
Sbjct: 631 AKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIK 690
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSE 689
+ + F ND HP+ +I + ++ L ++ + GYK + L D +E + YHSE
Sbjct: 691 HQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSE 750
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+ AIAF L+NTP SPI+V+K+ C DCH IK+I+ + REIIVRDS R H F +G C
Sbjct: 751 RFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVC 810
Query: 750 TCRDF 754
+C D+
Sbjct: 811 SCGDY 815
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 250/531 (47%), Gaps = 46/531 (8%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV------ 140
+ SL++ +I AHIVKTG + + F VN + + G++ A +VFD +P N
Sbjct: 21 KPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMM 80
Query: 141 -------------------------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
VSWT LI GY+Q++Q + A ++ DM G P
Sbjct: 81 ISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDY 140
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VTL T L+ LE+ + QIH +V+K E + V NSL Y L A + F
Sbjct: 141 VTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKH 200
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ K+ +++ +++ G + + F ++ + GI+P++FT ++ S + + G
Sbjct: 201 MLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFG 260
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
QVH +K + N+ V N+++ Y K VDE KLF M ++ +++N +I +A
Sbjct: 261 QQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW- 319
Query: 356 MDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
NG E+ +F KL + + F+++L+I + + L G QIH
Sbjct: 320 -----------NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQA 368
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ G + V ALV+MY KC + A ++F ++ ++ + WT+MI+ + + +
Sbjct: 369 ITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGI 428
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+F DM GV +Q TF L AC+N + ++ + + V L+D
Sbjct: 429 NVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG-SALLDT 487
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+ + GC+ +A +M E N V W+ I+ ++GN++ + +Q+++
Sbjct: 488 YAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 37/469 (7%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ + E G K ++ +LL V + +H ++KT + FV L
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNAL 282
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y K ++E K+F +P ++ +S+ +I+ Y N Q + + +F +
Sbjct: 283 LDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQ 342
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T L+ +S ++R+G+QIH + ++ V N+L +Y+ C A K F+
Sbjct: 343 FPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDN 402
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I K+ + WT +I A + G+ +G+ FS M G+ ++ T SI C + S+ +G
Sbjct: 403 IACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLG 462
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+HSL I+ G+ SN+ ++++ Y KCG + +A K F M N V+WNA+I+ +AQ
Sbjct: 463 RQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQ- 521
Query: 356 MDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG------- 407
NG + L+ F ++ SG KPD +F S+L+ CS +E+
Sbjct: 522 -----------NGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSM 570
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG--- 463
QI+ +T K T++V++ + GR + A ++ EM + I W+S++
Sbjct: 571 TQIYEVTPKREHY------TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRI 624
Query: 464 FANHSLSHQAL-QLF--EDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
NH L+ +A +LF ED+ A N N V +A+
Sbjct: 625 HKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAM 673
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/722 (31%), Positives = 385/722 (53%), Gaps = 82/722 (11%)
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF 163
+ ++ F L+++Y K G + +A+ VF +P + VSWT ++ G + + AI +F
Sbjct: 91 AAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMF 150
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
LDM+ G PT TL L++C++ E+ +G+++H++VVK V NS+ ++Y C
Sbjct: 151 LDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC 210
Query: 224 GSLNSAIKAFNRIREKNV-------------------------------MSWTTVIGACG 252
G +A F R+ E++V +SW VI
Sbjct: 211 GDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYN 270
Query: 253 ENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG + L FFS+MLS + P+EFT+TS+ S C + + +G QVH+ ++
Sbjct: 271 QNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIG 330
Query: 312 RVRNSIMYLYLKCGLVD---------------------------------EAQKLFDGMS 338
+V N+++ +Y K G V+ A+++FD MS
Sbjct: 331 QVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMS 390
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+ ++V W AMI G+ Q + HN EA+ +F + SG +P+ YT +++L++C
Sbjct: 391 NRDVVAWTAMIVGYEQ---------NGHN--DEAMELFRLMIRSGPEPNSYTVAAVLSVC 439
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISW 457
+ L LE G+QIH +++ V ++V MY + G + A RVF + R ++W
Sbjct: 440 ASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTW 499
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
TSMI A H L A+ LFE+ML GV+P+++TFVG L+AC++ G V E YF+ +Q
Sbjct: 500 TSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQD 559
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
++ I P M HY C++D+ R G EA +FI++M EP+ + W ++ CR H N +L
Sbjct: 560 KHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAE 619
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AAE+LL + P + +Y+ L +++ + GRW D A + +++ + + +SW I ++V
Sbjct: 620 LAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRV 679
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK---QQESFELTDE--ESASVYHSEKLA 692
+ F +D LHPQ +++ ++ + K G+ Q ++ DE E HSEKLA
Sbjct: 680 HVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLA 739
Query: 693 IAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
IAFGL++TP + + ++K+ +C DCH IK I+ + REII+RD+ R H F +G C+C+
Sbjct: 740 IAFGLVSTPEKTTLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCK 799
Query: 753 DF 754
D+
Sbjct: 800 DY 801
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/697 (33%), Positives = 389/697 (55%), Gaps = 21/697 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++E + + + +S+ + C SL +H ++V+ + + L+ +YGK G+
Sbjct: 192 MISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGD 251
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ A+++F+N+P WT +IS Y Q+ + A++VF M E P VT+ L A
Sbjct: 252 LYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCA 311
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C+ L ++ G+ +H +V++ + + +G +L LY+ G+L K F I+EK ++S
Sbjct: 312 CARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS 371
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W T+I NG+ + L F +M ++G+ P+ ++L S S CGT+ ++GAQ+H I
Sbjct: 372 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 431
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G ++ V+N+++ +Y KCG V A K+F+ + +LVTWN+MI G +Q
Sbjct: 432 KTGNFNDF-VQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQ--------- 481
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
NG EA+++F ++ + +K D TF S++ CS L LE+G+ +H + G D
Sbjct: 482 ---NGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKD 538
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+ TAL +MY KCG ++ A VF MS R+++SW+ MI G+ H + + LF ML
Sbjct: 539 SYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLG 598
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
+G++PN +TF+ L+ACS+AG V E YF M E+ ++P DH+ C++D+ R G +
Sbjct: 599 SGIKPNDITFMHILSACSHAGAVEEGKLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLN 657
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
A+ I + F N IW + GCR H +++ + LL + D Y +L +I+
Sbjct: 658 GAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYA 717
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL-- 660
G W+ V+++ + + L + +S I I K+Y F P D H Q+ +I++ L+
Sbjct: 718 EEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRS 777
Query: 661 VEKAKCFGYKQQESFELT---DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
+ A+ + + S T ++E+ V HSEKLAIAFG++NT + + + K+ +CRD
Sbjct: 778 LVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRD 837
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH+F KI + +T REII+RD R H F NG C+C D+
Sbjct: 838 CHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDY 874
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 168/548 (30%), Positives = 285/548 (52%), Gaps = 38/548 (6%)
Query: 59 FQEALSVLTE---GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+EA+S+ E + Q S++V S+L+ C LS +H ++K G D V T
Sbjct: 80 FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVET 139
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+ +YG+ +++A K FD +P +VV+W+S++ +VQN Q + +F M+ P
Sbjct: 140 SLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEP 199
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+VT+ + ACS L S+RLG+ +H YVV+ + E + S+ NSL +Y G L SA + F
Sbjct: 200 DSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLF 259
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + WT +I ++G + L F+KM ++PN+ T+ + C + ++
Sbjct: 260 ENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVK 319
Query: 294 VGAQVHSLGIKLGYASNLR-VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G VH I+ L + ++M LY G + + K+F+ + +++WN +I+
Sbjct: 320 EGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLIS-- 377
Query: 353 AQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ NG EAL +F ++ + G+ PD Y+ +S L+ C + + G QIH
Sbjct: 378 ----------IFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIH 427
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
+KTG +D V AL++MY KCG + A+++F ++ ++L++W SMI GF+ + S
Sbjct: 428 GYIIKTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSV 486
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM-----D 526
+A+ LF+ M + V+ +++TF+ + ACS+ LGY E K K +M D
Sbjct: 487 EAITLFDQMYMNCVKMDKLTFLSVIQACSH-------LGYLE-KGKWVHHKLIMYGLRKD 538
Query: 527 HYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
Y+ L DM+ + G ++ A +M E + V WSV IAG HG + Q+L
Sbjct: 539 SYLDTALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHGQINATISLFNQML 597
Query: 585 --KLKPKD 590
+KP D
Sbjct: 598 GSGIKPND 605
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/497 (26%), Positives = 245/497 (49%), Gaps = 19/497 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y+ L + C +L+ +HAH+ TG H+ T L+ Y + G E +++VFD P
Sbjct: 4 YMPLFRRCATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGK 195
+ + W LI YV E A+ ++ +M+ + +N + L ACS + +G
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++H V+K E D V SL +Y L+ A KAF+ + ++V++W++++ +NG
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+A +GL FS+M+SE ++P+ T+ S++ C + SLR+G VH ++ SN + N
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNN 240
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ +Y K G + A++LF+ + W MI+ + Q EAL++
Sbjct: 241 SLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ-----------SGCFQEALNV 289
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV-VVGTALVNMYK 434
F+K+ M+P+ T +L C+RL +++G +H ++ ++ +G AL+ +Y
Sbjct: 290 FAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYA 349
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
G + +VF + +T++SW ++I+ F + +AL LF M G+ P+ +
Sbjct: 350 DTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLAS 409
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
+L+AC + K + + LIDM+ + G + A +K+ E
Sbjct: 410 SLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIK-E 466
Query: 555 PNEVIWSVFIAGCRRHG 571
+ V W+ I G ++G
Sbjct: 467 KSLVTWNSMICGFSQNG 483
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 341/594 (57%), Gaps = 18/594 (3%)
Query: 167 LEAGNYPTNVTL-GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
LE P + T L C+ + + G+ +HA++++ D +GN+L ++Y+ CGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A K F ++ +++ ++WTT+I ++ L FF++ML G PNEFTL+S+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
G Q+H +K G+ SN+ V ++++ LY + GL+D+AQ +FD + N V+W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
NA+IAGHA+ +G +AL +F + G +P ++++S+ CS LE
Sbjct: 231 NALIAGHAR-----------RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+ +HA +K+G G L++MY K G I A ++F ++ R ++SW S++T +A
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H +A+ FE+M G+RPN+++F+ L ACS++G++ E Y+E+M+K+ I P
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEA 398
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY+ ++D+ R G + A FI++M EP IW + CR H N ELG YAAE + +
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P D + +L +I+ S GRW D A V+ +E + + SW+ I++ ++ F ND
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNT 700
HPQ EI + +E++ K K GY S + D++ V YHSEK+A+AF LLNT
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P S I + K+ +C DCH IK+ + + REIIVRD+ R H F +G+C+C+D+
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 218/437 (49%), Gaps = 26/437 (5%)
Query: 46 QLNGNSEPVRSLGFQEALSVLTEGPKVQTSS--------------YVSLLQECVNRKSLS 91
+LN PV E+L + ++TSS Y +LL++C K L
Sbjct: 18 RLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLI 77
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
I+HAHI+++ D + L+N+Y KCG++EEA+KVF+ +P+ + V+WT+LISGY
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
Q+ +P A+ F ML G P TL + + A ++ G Q+H + VK + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG++L LY+ G ++ A F+ + +N +SW +I + L F ML +G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ F+ S+ C + L G VH+ IK G N+++ +Y K G + +A+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
K+FD ++ ++V+WN+++ +AQ H G EA+ F ++ G++P+ +F
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQ-----------HGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+LT CS L++G + L K G + + +V++ + G + RA R EM
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 452 R-TLISWTSMITGFANH 467
T W +++ H
Sbjct: 427 EPTAAIWKALLNACRMH 443
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/702 (33%), Positives = 376/702 (53%), Gaps = 17/702 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F+ L EG ++ V+++ C + ++H K G ++ V LV++
Sbjct: 284 FKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDM 343
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VT 177
Y KCG + EA+ +FD NVVSW ++I GY + + +M N VT
Sbjct: 344 YSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVT 403
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ L ACS + K+IH Y ++ D V N+ + Y+ C SL+ A + F +
Sbjct: 404 VLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGME 463
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
K V SW +IGA +NG + L F M+ G+ P+ FT+ S+ C + LR G +
Sbjct: 464 GKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKE 523
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H ++ G + + S+M LY++C + + +FD M + +LV WN MI G +Q
Sbjct: 524 IHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQ--- 580
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
++L EAL F ++ S G+KP + +L CS++ AL G+++H+ LK
Sbjct: 581 ---NELPC-----EALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKA 632
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
D V AL++MY KCG +E++ +F ++ + W +I G+ H +A++LF
Sbjct: 633 HLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELF 692
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
E M G RP+ TF+G L AC++AG+V E L Y MQ Y +KP ++HY C++DM R
Sbjct: 693 ELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGR 752
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G + EA + +M EP+ IWS ++ CR +G++E+G +++LL+L+P E+Y +L
Sbjct: 753 AGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLL 812
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+++ G+W++V V+ +E L + SWI I VY F +DG +S +I +
Sbjct: 813 SNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESKKIQQTW 872
Query: 658 DELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKST 712
+L +K GYK S EL +E + HSEKLAI+FGLLNT + + V K+
Sbjct: 873 IKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGTTLRVCKNL 932
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN IK+++ + R+IIVRD+KR H F NG CTC DF
Sbjct: 933 RICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCGDF 974
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 147/487 (30%), Positives = 247/487 (50%), Gaps = 22/487 (4%)
Query: 21 PSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSL 80
P SSL T K H+ QR + + +GN +L A + + + L
Sbjct: 42 PKSSL-TSHTKTHSPILQRLHN--LCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGIL 98
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQ---DFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
L+ C + K++ +HA + + SH+ D + T ++ +Y CG+ +++ VFD
Sbjct: 99 LRACGHHKNIHVGRKVHALV--SASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQ 196
++ + +L+SGY +N+ AI +FL++L A + P N TL AC+ + + LG+
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+HA +K D VGN+L ++Y CG + SA+K F +R +N++SW +V+ AC ENG
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 257 AVQGLRFFSKML---SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ F ++L EG+ P+ T+ ++ C + +R+G VH L KLG + V
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KCG + EA+ LFD N+V+WN +I G+++ D G E L
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDF--------RGVFELL 388
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ ++ + T ++L CS L ++IH + GFL D +V A V Y
Sbjct: 389 QEMQR--EEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAY 446
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KC ++ A RVF M +T+ SW ++I A + ++L LF M+ +G+ P++ T
Sbjct: 447 AKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIG 506
Query: 494 GALAACS 500
L AC+
Sbjct: 507 SLLLACA 513
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 44/305 (14%)
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNS------IMYLYLKCGLVDEAQKLFDGMSH 339
CG ++ VG +VH+L +++ ++RN I+ +Y CG +++ +FD
Sbjct: 102 CGHHKNIHVGRKVHAL-----VSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTIC 398
+L +NA+++G+++ L +D A+S+F +L +++ + PD +T + C
Sbjct: 157 KDLFLYNALLSGYSRNA-LFRD----------AISLFLELLSATDLAPDNFTLPCVAKAC 205
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ + +E GE +HAL LK G SD VG AL+ MY KCG +E A +VF M R L+SW
Sbjct: 206 AGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWN 265
Query: 459 SMITGFANHSLSHQALQLFEDMLLA---GVRPNQVTFVGALAACS-----NAGMVYEALG 510
S++ + + + +F+ +L++ G+ P+ T V + AC+ GMV L
Sbjct: 266 SVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLA 325
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGC 567
+ + +E + L+DM+ + G + EA FD M+ N V W+ I G
Sbjct: 326 FKLGITEEVTVNN------SLVDMYSKCGYLGEARALFD----MNGGKNVVSWNTIIWGY 375
Query: 568 RRHGN 572
+ G+
Sbjct: 376 SKEGD 380
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 218/582 (37%), Positives = 339/582 (58%), Gaps = 19/582 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T L C+ L + GK IHA ++ + DD + N+L +LY+ CG L A K F+ + +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV--GAQ 297
+V++WT +I ++ L +ML G++PN+FTL S+ + S V G Q
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H L ++ GY SN+ V +I+ +Y +C ++EAQ +FD M N V+WNA+IAG+A+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR--- 196
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
G +A +FS + +KP +T+SS+L C+ + +LEQG+ +HAL +K
Sbjct: 197 --------KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKW 248
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G VG L++MY K G IE A +VF ++ R ++SW SM+TG++ H L ALQ F
Sbjct: 249 GEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRF 308
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
E+ML + PN +TF+ L ACS+AG++ E YF+MM+K Y ++P + HY+ ++D+ R
Sbjct: 309 EEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGR 367
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G ++ A FI +M +P +W + CR H NMELG YAAE + +L ++ +L
Sbjct: 368 AGHLDRAIQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLL 427
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+I+ AGRW D A V+ + +E + + SW+ ++++V+ F +D HPQ EI +
Sbjct: 428 YNIYALAGRWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMW 487
Query: 658 DELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
+++ +K K GY S L + E+ YHSEKLA+AF LLNTP S I + K+
Sbjct: 488 EQISDKIKEIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNI 547
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ K ++ L REIIVRD+ R H F +G C+C D+
Sbjct: 548 RICGDCHSAFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDY 589
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 205/392 (52%), Gaps = 14/392 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL+ C + L+ +IIHA ++ + D + L+N+Y KCG++ A+K+FD +
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL--GKQ 196
+VV+WT+LI+GY Q+ +P+ A+ + +ML G P TL + L A S + S + G+Q
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H ++Y + + V ++ +Y+ C L A F+ + KN +SW +I G+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ FS ML E ++P FT +S+ C +M SL G VH+L IK G V N+
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G +++A+K+FD ++ ++V+WN+M+ G++Q H G AL F
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQ-----------HGLGKVALQRF 308
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ + + P+ TF +LT CS L++G + K + +V++ +
Sbjct: 309 EEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRA 368
Query: 437 GRIERASRVFVEMSTR-TLISWTSMITGFANH 467
G ++RA + EM + T W +++ H
Sbjct: 369 GHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 176/394 (44%), Gaps = 56/394 (14%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQEC--VNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
Q+AL +L E G K + SLL+ V + +H ++ G + +V
Sbjct: 98 QDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSC 157
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
++++Y +C ++EEAQ +FD + N VSW +LI+GY + Q + A +F +ML P
Sbjct: 158 AILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKP 217
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T+ T + L AC+S+ S+ GK +HA ++K+ + VGN+L +Y+ GS+ A K F
Sbjct: 218 THFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVF 277
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+R+ +++V+SW +++ ++G L+ F +ML I PN+ T + + C
Sbjct: 278 DRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACS------ 331
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
GL+DE + FD M N+ I+ +
Sbjct: 332 -----------------------------HAGLLDEGRHYFDMMKKYNV---EPQISHYV 359
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
M+DL L A+ S++ +KP + ++L C +E G
Sbjct: 360 TMVDL----LGRAGHLDRAIQFISEM---PIKPTAAVWGALLGACRMHKNMELGGYAAEC 412
Query: 414 TLKTGFLSDVVVGTA--LVNMYKKCGRIERASRV 445
+ L GT L N+Y GR A++V
Sbjct: 413 IFE---LDSHYPGTHVLLYNIYALAGRWNDAAKV 443
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/665 (33%), Positives = 373/665 (56%), Gaps = 17/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH H++K G + V LV+ Y K + A ++F ++ + V++ SL++GY
Sbjct: 162 IHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E AI +FL++ +G P++ T L+A L+ + G+Q+H +V+K + VGN+
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L YS ++ K F + E + +S+ VI + NG+ + F K+
Sbjct: 282 LLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+F ++ S+ + L+LR+G Q+H I +G RV N+++ +Y KC EAQK+FD
Sbjct: 342 QFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFD 401
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
++ + V W AMI+ + Q E +++FS + +G+ D TF+SIL
Sbjct: 402 NIACKSTVPWTAMISAYVQ-----------KGKHEEGINVFSDMRRTGVPADQATFASIL 450
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ L ++ G Q+H+L +++GF+S+V G+AL++ Y KCG + A + F EM R +
Sbjct: 451 RACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSV 510
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW ++I+ +A + L F+ M+ +G +P+ V+F+ L+ACS+ G V EAL +F M
Sbjct: 511 SWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSM 570
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ Y++ P +HY ++D+ R G +EA + +M FEP+E++WS + CR H N EL
Sbjct: 571 TQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHEL 630
Query: 576 GFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
AA++L ++ +D Y + +I+ AG+W++VA VK R+ + + +SW+ IK
Sbjct: 631 AKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIK 690
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSE 689
+ + F ND HP+ +I + ++ L ++ + GYK + L D +E + YHSE
Sbjct: 691 HQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSE 750
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+ AIAF L+NTP SPI+V+K+ C DCH IK+I+ + REIIVRDS R H F +G C
Sbjct: 751 RFAIAFALMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVC 810
Query: 750 TCRDF 754
+C D+
Sbjct: 811 SCGDY 815
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/531 (26%), Positives = 250/531 (47%), Gaps = 46/531 (8%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV------ 140
+ SL++ +I AHIVKTG + + F VN + + G++ A +VFD +P N
Sbjct: 21 KPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMM 80
Query: 141 -------------------------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
VSWT LI GY+Q++Q + A ++ DM G P
Sbjct: 81 ISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDY 140
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VTL T L+ LE+ + QIH +V+K E + V NSL Y L A + F
Sbjct: 141 VTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKH 200
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ K+ +++ +++ G + + F ++ + GI+P++FT ++ S + + G
Sbjct: 201 MLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFG 260
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
QVH +K + N+ V N+++ Y K VDE KLF M ++ +++N +I +A
Sbjct: 261 QQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW- 319
Query: 356 MDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
NG E+ +F KL + + F+++L+I + + L G QIH
Sbjct: 320 -----------NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQA 368
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ G + V ALV+MY KC + A ++F ++ ++ + WT+MI+ + + +
Sbjct: 369 ITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGI 428
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+F DM GV +Q TF L AC+N + ++ + + V L+D
Sbjct: 429 NVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSG-SALLDT 487
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+ + GC+ +A +M E N V W+ I+ ++GN++ + +Q+++
Sbjct: 488 YAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGTLNSFQQMIQ 537
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 37/469 (7%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ + E G K ++ +LL V + +H ++KT + FV L
Sbjct: 223 EEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNAL 282
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y K ++E K+F +P ++ +S+ +I+ Y N Q + + +F +
Sbjct: 283 LDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQ 342
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T L+ +S ++R+G+QIH + ++ V N+L +Y+ C A K F+
Sbjct: 343 FPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDN 402
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I K+ + WT +I A + G+ +G+ FS M G+ ++ T SI C + S+ +G
Sbjct: 403 IACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLG 462
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+HSL I+ G+ SN+ ++++ Y KCG + +A K F M N V+WNA+I+ +AQ
Sbjct: 463 RQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQ- 521
Query: 356 MDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG------- 407
NG + L+ F ++ SG KPD +F S+L+ CS +E+
Sbjct: 522 -----------NGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSM 570
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG--- 463
QI+ +T K T++V++ + GR + A ++ EM + I W+S++
Sbjct: 571 TQIYEVTPKREHY------TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRI 624
Query: 464 FANHSLSHQAL-QLF--EDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
NH L+ +A +LF ED+ A N N V +A+
Sbjct: 625 HKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAM 673
>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 698
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 239/695 (34%), Positives = 381/695 (54%), Gaps = 20/695 (2%)
Query: 69 GPKVQTSSYV-SLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNME 126
P T+ ++ SLLQ C L ++HA +V +G+ F+ L+ +Y C ++
Sbjct: 14 APDAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A ++F +PR N VSWT+L+SG QN A+ F M AG PT L +A A +
Sbjct: 74 SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAA 133
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+L + G Q+H V+ + + V ++L +YS CG L+ A + F+++ +K+ ++WT
Sbjct: 134 ALGAPLPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTA 193
Query: 247 VIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I +NG + F M EG + ++ S+ S G + + +H K
Sbjct: 194 MIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKA 253
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G+ + VRN+++ +Y K V+ A ++ N+V+ +MI G+ +
Sbjct: 254 GFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIET--------- 304
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+ EAL I+ +L G++P+ +TFSS++ C+ LEQG Q+HA +KT + D
Sbjct: 305 --DCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSF 362
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ LV+MY KCG I + ++F E+ RT I+W ++I FA H +A+Q F+ M+ +G
Sbjct: 363 VGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSG 422
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+RPN + FV L ACS+AG+V E L YF M++ + I+P +HY C+ID + R G ++EA
Sbjct: 423 IRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEA 482
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ FI +M +PN W + CR G+ ELG AA+ L+KL+P + + L I+ S
Sbjct: 483 YKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASL 542
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
G+WEDV V+ L R+ ++ + +SW+ K + F D HPQ +I++ L+EL +
Sbjct: 543 GQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRI 602
Query: 665 KCFGYKQQESF-----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY SF E +E YHSE++A+AF L++ P PI+V K+ +C DCH
Sbjct: 603 KEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCH 662
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I + R+IIVRD+ R H FVNG C+C D+
Sbjct: 663 TAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDY 697
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E G + ++ S+++ C + L +HA ++KT +D FV + L
Sbjct: 308 EEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTL 367
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++YGKCG + + ++F+ + ++W ++I+ + Q+ AI F M+ +G P +
Sbjct: 368 VDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNH 427
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ + LTACS + G K ++ + E + + Y G L+ A K +
Sbjct: 428 IAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFIS 487
Query: 235 RIREK-NVMSWTTVIGACGENG 255
+ K N W +++GAC G
Sbjct: 488 EMPIKPNAYGWCSLLGACRMRG 509
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/678 (33%), Positives = 382/678 (56%), Gaps = 19/678 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ CV SL + + +H + K G D FV LV++Y + G ++ A KVF ++
Sbjct: 126 TFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM 182
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P +V SW ++ISG+ QN A+ V M G +T+ + L C+ + + G
Sbjct: 183 PVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH +V+K+ + D V N+L ++YS G L A F+++ ++++SW ++I A +N
Sbjct: 243 LIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNN 302
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS-NLRVR 314
+ LRFF M GI+P+ T+ S++S+ + R+ + I+ + ++ +
Sbjct: 303 DPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG 362
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y K G ++ A +FD + + ++WN ++ G+ Q LA + + A+N E
Sbjct: 363 NALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQN-GLASEAIDAYNMMEECRD 421
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
P+ T+ SI+ S + AL+QG +IHA +K DV V T L+++Y
Sbjct: 422 TI---------PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYG 472
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCGR+E A +F E+ T + W ++I H +ALQLF+DML V+ + +TFV
Sbjct: 473 KCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVS 532
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS++G+V E F++MQKEY IKP + HY C++D+ R G +E+A++ ++ M +
Sbjct: 533 LLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQ 592
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ IW ++ C+ +GN ELG A+++LL++ ++ Y +L +I+ + +WE V V+
Sbjct: 593 PDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVR 652
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+L R+ L +T WS + + K F + HP+ EI+K L L K K GY S
Sbjct: 653 SLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYS 712
Query: 675 F---ELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F ++ ++E + HSE+LAIAFG+++TP SPI + K+ +C DCHN K I+ ++
Sbjct: 713 FVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRIS 772
Query: 730 AREIIVRDSKRLHKFVNG 747
REI+VRDS R H F +G
Sbjct: 773 EREIVVRDSNRFHHFKDG 790
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 158/521 (30%), Positives = 260/521 (49%), Gaps = 33/521 (6%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ + + +L CVN ++ + +HA ++ G Q+ + T L+N+Y G++ ++ F
Sbjct: 21 KDADFNALFNSCVN---VNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTF 77
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELA---IHVFLDMLEAGNY-PTNVTLGTALTACSSL 188
D + + N+ SW S+IS YV+ + A ++ M G+ P T L AC SL
Sbjct: 78 DYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSL 137
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
GK++H V K EDD V SL LYS G L+ A K F + K+V SW +I
Sbjct: 138 VD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG A L ++M EG++ + T+ SI VC + G +H +K G
Sbjct: 195 SGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S++ V N+++ +Y K G + +AQ +FD M +LV+WN++IA + Q +N
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ-----------NND 303
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGT 427
+ AL F + G++PDL T S+ +I S+L I ++ +L DVV+G
Sbjct: 304 PSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGN 363
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVR 486
ALVNMY K G + A VF ++ + ISW +++TG+ + L+ +A+ + M
Sbjct: 364 ALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI 423
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA 544
PNQ T+V + A S+ G + + + ++ K K +D ++ CLID++ + G +E+A
Sbjct: 424 PNQGTWVSIIPAYSHVGALQQGM---KIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
++ + V W+ IA HG E A QL K
Sbjct: 481 MSLFYEIPRD-TSVPWNAIIASLGIHGRGE----EALQLFK 516
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 206/410 (50%), Gaps = 19/410 (4%)
Query: 62 ALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL VL EG K+ T + S+L C + N +IH H++K G D FV L+N
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G +++AQ VFD + ++VSW S+I+ Y QN+ P A+ F M G P +T
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLT 325
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + + S L R+ + I +V++ + D D +GN+L ++Y+ G +N A F+++
Sbjct: 326 VVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQL 385
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVG 295
K+ +SW T++ +NG A + + ++ M PN+ T SI + +L+ G
Sbjct: 386 PRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQG 445
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H+ IK ++ V ++ LY KCG +++A LF + V WNA+IA
Sbjct: 446 MKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIAS---- 501
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
L H G EAL +F + + +K D TF S+L+ CS +++G++ +
Sbjct: 502 -------LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQ 554
Query: 416 KT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG 463
K G + +V++ + G +E+A + M + S W ++++
Sbjct: 555 KEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSA 604
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 149/308 (48%), Gaps = 17/308 (5%)
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H+L + G + N+ + ++ LY+ G + ++ FD + N+ +WN++I+ + +
Sbjct: 40 KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFG 99
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H +FS ++PD YTF IL C V+L G+++H K
Sbjct: 100 KY-------HEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC---VSLVDGKKVHCCVFK 149
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF DV V +LV++Y + G ++ A +VFV+M + + SW +MI+GF + + AL +
Sbjct: 150 MGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGV 209
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEA-LGYFEMMQKEYKIKPVMDHYMCLIDMF 535
M GV+ + +T L C+ + V L + +++ + + LI+M+
Sbjct: 210 LNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN--ALINMY 267
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN--MELGFYAAEQLLKLKPKDCES 593
+ G +++A +M+ + V W+ IA ++ + L F+ QL ++P D +
Sbjct: 268 SKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRP-DLLT 325
Query: 594 YAMLLDIF 601
L IF
Sbjct: 326 VVSLTSIF 333
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/671 (34%), Positives = 369/671 (54%), Gaps = 18/671 (2%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + + IHA +++ G +D +++ ++ GN + ++ D N+ + ++I G
Sbjct: 23 LKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRG 82
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
V N + +I ++ M + G P + T L AC+ + LG ++H+ VVK E D
Sbjct: 83 LVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEAD 142
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V SL +LY+ CG +++A K F+ I +KN SWT I G+ + + F ++L
Sbjct: 143 AFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLE 202
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
G++P+ F+L + S C LR G + + G N+ V +++ Y KCG ++
Sbjct: 203 MGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMER 262
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDL 388
A+ +FDGM N+V+W++MI G+A NG EAL +F K+ + G+KPD
Sbjct: 263 ARSVFDGMLEKNIVSWSSMIQGYAS------------NGLPKEALDLFFKMLNEGLKPDC 310
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
Y +L C+RL ALE G+ L FL + V+GTAL++MY KCGR++RA VF
Sbjct: 311 YAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRG 370
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M + + W + I+G A AL LF M +G++P++ TFVG L AC++AG+V E
Sbjct: 371 MRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEG 430
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
YF M+ + + P ++HY C++D+ R GC++EA IK M E N ++W + GCR
Sbjct: 431 RRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCR 490
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
H + +L ++L+ L+P +Y +L +I+ ++ +WE+ A ++++ E + + +
Sbjct: 491 LHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGY 550
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASV 685
SWI + V+ F D HP S +I+ L EL + K GY F++ +EE
Sbjct: 551 SWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEEEKEHF 610
Query: 686 Y--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
HSEKLA+AFGL++T ILVVK+ +C DCH IK I+ + REIIVRD+ R H
Sbjct: 611 IGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVRDNNRFHC 670
Query: 744 FVNGHCTCRDF 754
F +G C+C+D+
Sbjct: 671 FTDGLCSCKDY 681
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 214/429 (49%), Gaps = 21/429 (4%)
Query: 59 FQEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQE++ S+ EG + ++ +L+ C +H+ +VK G D FV
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y KCG ++ A KVFD++P N SWT+ ISGYV + AI +F +LE G P
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ +L L+AC +R G+ I Y+ + + V +L Y CG++ A F+
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ EKN++SW+++I NG + L F KML+EG++P+ + + + C + +L +
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +L + N + +++ +Y KCG +D A ++F GM + V WNA I+G A
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA- 387
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHAL 413
+S H +AL +F ++ SG+KPD TF +L C+ +E+G + +++
Sbjct: 388 --------MSGHV--KDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSM 437
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQ 472
++ +V++ + G ++ A ++ M I W +++ G H+
Sbjct: 438 ECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGG----CRLHR 493
Query: 473 ALQLFEDML 481
QL E +L
Sbjct: 494 DTQLVEVVL 502
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/682 (33%), Positives = 367/682 (53%), Gaps = 84/682 (12%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
+S + LL C+ +S ++HA I+ T + F+ L++VYGKC +++A+K+FD
Sbjct: 15 SSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFD 74
Query: 134 NLPRINVVSWTSLI-------------------------------SGYVQNSQPELAIHV 162
+P+ N +W SLI SG+ Q+ + E ++
Sbjct: 75 RMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEY 134
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F+ M + G+AL+AC+ L + +G Q+HA V K + D +G++L +YS
Sbjct: 135 FVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSK 194
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS+ A + F+ + E+N+++W ++I +NG A + L F +M+ G++P+E TL S+
Sbjct: 195 CGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS--- 338
S C ++ +L+ G Q+H+ +K + +L + N+++ +Y KC V+EA+++FD MS
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314
Query: 339 ----------------------------HVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
N+V+WNA+IAG+ Q NG
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQ------------NGEN 362
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF------LSDV 423
EAL +F L + P YTF ++L+ C+ L L G Q H LK GF SD+
Sbjct: 363 EEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDI 422
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VG +L++MY KCG IE SRVF +M R +SW ++I G+A + +ALQ+F ML+
Sbjct: 423 FVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVC 482
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G +P+ VT +G L ACS+AG+V E YF M+ E+ + P+ DHY C++D+ R GC+ E
Sbjct: 483 GEKPDHVTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNE 541
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A + I+ M P+ V+W +A C+ HGN+E+G +AAE+LL++ P + Y +L +++
Sbjct: 542 AKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAE 601
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
GRW DV V+ L R++ +++ SWI ++ +V+ F D HP +I+ VL L E+
Sbjct: 602 LGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQ 661
Query: 664 AKCFGY-KQQESFELTDEESAS 684
K GY FE DE+S S
Sbjct: 662 MKRVGYIPDANDFEAYDEQSKS 683
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/480 (28%), Positives = 232/480 (48%), Gaps = 88/480 (18%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P + L +C S R + +HA ++ Q + + N L +Y C L+ A K
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 233 FNRIREKNVMSWTTVIGACGENG---EAV----------------------------QGL 261
F+R+ ++N +W ++I ++G EA + L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
+F KM E NE++ S S C ++ L +G QVH+L K Y++++ + ++++ +Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLN 380
KCG V A+++F GM NLVTWN++I + Q NG +EAL +F ++
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQ------------NGPASEALEVFVRMM 240
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRI 439
SG++PD T +S+++ C+ L AL++G QIHA +KT F D+V+G ALV+MY KC ++
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 440 ERASRVFVEMSTRTLISWTSMITGFA-------------------------------NHS 468
A RVF MS R ++S TSM++G+A +
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNG 360
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDH 527
+ +AL+LF + + P TF L+AC+N A ++ + ++++ ++ + +
Sbjct: 361 ENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAES 420
Query: 528 YM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+ LIDM+++ G IE+ +KM E + V W+ I G ++G Y AE L
Sbjct: 421 DIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNAIIVGYAQNG------YGAEAL 473
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 43/334 (12%)
Query: 61 EALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFL 115
EAL V + G + + S++ C + +L IHA +VKT +D V+ L
Sbjct: 231 EALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNAL 290
Query: 116 VNVYGKCGNMEEAQKVFDNLP-------------------------------RINVVSWT 144
V++Y KC + EA++VFD + + NVVSW
Sbjct: 291 VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWN 350
Query: 145 SLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK- 203
+LI+GY QN + E A+ +F + +PT+ T G L+AC++L + LG+Q H +V+K
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQ 410
Query: 204 ---YQT--EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+Q+ E D VGNSL +Y CGS+ + F +++E++ +SW +I +NG
Sbjct: 411 GFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGA 470
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F KML G +P+ T+ + C + G + G ++
Sbjct: 471 EALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMV 530
Query: 319 YLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
L + G ++EA+ L + M + + V W +++A
Sbjct: 531 DLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAA 564
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 48/230 (20%)
Query: 383 GMKPDLY-----TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
G+ DLY F+ +L C R + +HA L T F ++ + L+++Y KC
Sbjct: 5 GLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCD 64
Query: 438 RIERASRVFVEMSTRTLISW-------------------------------TSMITGFAN 466
++ A ++F M R +W SM++GFA
Sbjct: 65 CLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ 124
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H ++L+ F M N+ +F AL+AC AG++ +G ++ K + D
Sbjct: 125 HDRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGT-QVHALVSKSRYSTD 181
Query: 527 HYM--CLIDMFVRLG---CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
YM LIDM+ + G C EE F + E N V W+ I ++G
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGM----IERNLVTWNSLITCYEQNG 227
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/689 (34%), Positives = 384/689 (55%), Gaps = 23/689 (3%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T Y SL+Q+C+ KS+++ I +H +K G H + L++ Y KCG++ A+KVFD
Sbjct: 77 TKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFD 134
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+P ++V+W S+I+ Y++N + + AI ++ M+ G P T + A S L +
Sbjct: 135 EVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 194
Query: 194 GKQIHAY-VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
G++ H VV + VG++L +Y+ G + A +++ K+V+ +T +I
Sbjct: 195 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS 254
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+GE + L+ F M +GI+ NE+TL+S+ CG + L G +H L +K G S +
Sbjct: 255 HHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVA 314
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE- 371
+ S++ +Y +CGLVD++ K+F + N VTW ++I G Q NG E
Sbjct: 315 SQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQ------------NGREEI 362
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL F ++ S + P+ +T SS+L CS L LEQG+QIHA+ +K G D VG AL++
Sbjct: 363 ALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALID 422
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG E A VF + ++S SMI +A + H+ALQLF M G+ PN VT
Sbjct: 423 FYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVT 482
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
++G L+AC+NAG++ E F + I+ DHY C++D+ R G ++EA I ++
Sbjct: 483 WLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQV 542
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+ + VIW ++ CR HG++E+ +++ L P+D ++ +L +++ S G W V
Sbjct: 543 NI-SDVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVI 601
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
+K+ RE +L + SW+ ++ ++++F D HP +I + L+EL+EK K GY
Sbjct: 602 EMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVP 661
Query: 672 QESFELTD-EESASV----YHSEKLAIAFGLLNTPIV-SPILVVKSTTMCRDCHNFIKII 725
F L D +E + YHSEKLA+AF L + + I ++K+ +C DCH ++K +
Sbjct: 662 DTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFV 721
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + R+II RD KR H F NG C+C D+
Sbjct: 722 SKIVGRDIIARDVKRFHHFRNGLCSCGDY 750
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 156/315 (49%), Gaps = 9/315 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + + S+L C N + L++ +IH IVK G T L+ +Y +CG +++
Sbjct: 272 KGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDD 331
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+ KVF N V+WTS+I G VQN + E+A+ F ML + P + TL + L ACSS
Sbjct: 332 SLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSS 391
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + GKQIHA V+K+ + D VG +L Y CGS A FN + E +V+S ++
Sbjct: 392 LAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSM 451
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + +NG + L+ FS M G++PN T + S C L G + S G
Sbjct: 452 IYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGN 511
Query: 308 ASNLRVRNSIMYLYL-KCGLVDEAQKLFDGMSHVNLVTWNAM-----IAGHAQMMDLAKD 361
+ + M L + G + EA+ L + ++ ++V W + I G +M +
Sbjct: 512 IELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMN 571
Query: 362 ---DLSAHNGGTEAL 373
DL+ +GGT L
Sbjct: 572 RVIDLAPEDGGTHVL 586
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 390/715 (54%), Gaps = 29/715 (4%)
Query: 55 RSLGFQEALS----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DF 109
R+ ++EAL ++ EG + + +V + C + K L +++HA I++T + D
Sbjct: 35 RNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDI 94
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ T L+ +Y +C ++E A+K FD + + +V+W +LI+GY +N A+ ++ DM+
Sbjct: 95 ILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSK 154
Query: 170 ---GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
G P +T +AL ACS + I G++I A V D+ V N+L ++YS CGSL
Sbjct: 155 SPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSL 214
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
SA K F+R++ ++V++W T+I + G A Q L F +M +PN T + + C
Sbjct: 215 ESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKLFDGMSHVNLVTW 345
+ L G +H + GY S+L + N ++ +Y KC ++EA+++F+ + +++TW
Sbjct: 275 TNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITW 334
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
N +I + Q + +AL IF ++ + P+ T S++L+ C+ L A
Sbjct: 335 NILIVAYVQ-----------YGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKR 383
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+ +HAL +DVV+ +L+NMY +CG ++ VF + ++L+SW+++I +A
Sbjct: 384 QGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYA 443
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H S L+ F ++L G+ + VT V L+ACS+ GM+ E + F M ++ + P
Sbjct: 444 QHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDY 503
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
H++C++D+ R G +E A + I M F P+ V W+ ++GC+ H + + A++L +
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Query: 586 LKPKDCESYAMLL-DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
L+ +D S LL +++ AGRW+DV +N K S+I I D V+ F D
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAARK---NPGCSYIEINDTVHEFVAGD 620
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLN 699
HP+ I + L ++ K GY L ++E YHSEKLAIA+GL++
Sbjct: 621 KSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLIS 680
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP +P+ +VK+ C DCH K I+ + R+I+VRDS R H F NG C+C+D+
Sbjct: 681 TPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDY 735
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 252/474 (53%), Gaps = 20/474 (4%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKCG++ +A VF + N VSWT +++ + +N A+ + M+ G P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
A+ CSS + ++ G+ +HA +++ Q E D +G +L ++Y+ C L A K F+ +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLS---EGIQPNEFTLTSISSVCGTMLSLR 293
+K +++W +I NG+ L+ + M+S EG++P+ T +S C + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G ++ + + GYAS+ V+N+++ +Y KCG ++ A+K+FD + + +++ WN MI+G+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ T+AL +F ++ + KP++ TF +LT C+ L LEQG IH
Sbjct: 241 K-----------QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289
Query: 414 TLKTGFLSDVVVGTALVNMYKKC-GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+ G+ SD+V+G L+NMY KC +E A +VF + TR +I+W +I + + +
Sbjct: 290 VKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKD 349
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYMCL 531
AL +F+ M L V PN++T L+AC+ G + ++ K V+++ L
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN--SL 407
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
++M+ R G +++ + + + V WS IA +HG+ G +LL+
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/715 (32%), Positives = 390/715 (54%), Gaps = 29/715 (4%)
Query: 55 RSLGFQEALS----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DF 109
R+ ++EAL ++ EG + + +V + C + K L +++HA I++T + D
Sbjct: 35 RNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDI 94
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ T L+ +Y +C ++E A+K FD + + +V+W +LI+GY +N A+ ++ DM+
Sbjct: 95 ILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSK 154
Query: 170 ---GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
G P +T +AL AC+ + I G++I A V D+ V N+L ++YS CGSL
Sbjct: 155 SPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSL 214
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
SA K F+R++ ++V++W T+I + G A Q L F +M +PN T + + C
Sbjct: 215 ESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTAC 274
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKLFDGMSHVNLVTW 345
+ L G +H + GY S+L + N ++ +Y KC ++EA+++F+ M +++TW
Sbjct: 275 TNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITW 334
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
N +I + Q + +AL IF ++ + P+ T S++L+ C+ L A
Sbjct: 335 NILIVAYVQ-----------YGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKR 383
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+ +HAL +DVV+ +L+NMY +CG ++ VF + ++L+SW+++I +A
Sbjct: 384 QGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYA 443
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H S L+ F ++L G+ + VT V L+ACS+ GM+ E + F M ++ + P
Sbjct: 444 QHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDY 503
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
H++C++D+ R G +E A + I M F P+ V W+ ++GC+ H + + A++L +
Sbjct: 504 RHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFE 563
Query: 586 LKPKDCESYAMLL-DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
L+ +D S LL +++ AGRW+DV +N K S+I I D V+ F D
Sbjct: 564 LESEDEHSTVTLLSNVYAEAGRWDDVRKTRNRRAARK---NPGCSYIEINDTVHEFVAGD 620
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLN 699
HP+ I + L ++ K GY L ++E YHSEKLAIA+GL++
Sbjct: 621 KSHPEEELIAAEIKRLSKQMKDAGYVPDMRMVLHNVKEEEKEQMLCYHSEKLAIAYGLIS 680
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP +P+ +VK+ C DCH K I+ + R+I+VRDS R H F NG C+C+D+
Sbjct: 681 TPPGTPLHIVKNLRACVDCHAAAKFISRIVGRKIVVRDSTRFHHFENGSCSCKDY 735
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 252/474 (53%), Gaps = 20/474 (4%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKCG++ +A VF + N VSWT +++ + +N A+ + M+ G P
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
A+ CSS + ++ G+ +HA +++ + E D +G +L ++Y+ C L A K F+ +
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLS---EGIQPNEFTLTSISSVCGTMLSLR 293
+K +++W +I NG+ L+ + M+S EG++P+ T +S C + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G ++ + + GYAS+ V+N+++ +Y KCG ++ A+K+FD + + +++ WN MI+G+A
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ T+AL +F ++ + KP++ TF +LT C+ L LEQG IH
Sbjct: 241 K-----------QGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRK 289
Query: 414 TLKTGFLSDVVVGTALVNMYKKC-GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+ G+ SD+V+G L+NMY KC +E A +VF M TR +I+W +I + + +
Sbjct: 290 VREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKD 349
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYMCL 531
AL +F+ M L V PN++T L+AC+ G + ++ K V+++ L
Sbjct: 350 ALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLEN--SL 407
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
++M+ R G +++ + + + V WS IA +HG+ G +LL+
Sbjct: 408 MNMYNRCGSLDDTVGVFAAIR-DKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQ 460
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/748 (32%), Positives = 392/748 (52%), Gaps = 61/748 (8%)
Query: 51 SEPVRSLGFQEALSVLTEGPK---VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
+ PV +L + LS P V ++LL C K+L + IH+ I+KTG H
Sbjct: 5 ASPVSTL---QVLSFSDPSPPYKLVHDHPSLTLLSNC---KTLQTLKQIHSQIIKTGLHN 58
Query: 108 DFFVMTFLVN--VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
F ++ L+ G++ A +F + N V W +I G + P LA+ ++
Sbjct: 59 THFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVH 118
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M+ +G P T + +C+ + GKQ+HA+V+K E + V SL ++Y+ G
Sbjct: 119 MISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGE 178
Query: 226 L-------------------------------NSAIKAFNRIREKNVMSWTTVIGACGEN 254
L + A + F+ I ++V+SW +I ++
Sbjct: 179 LVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQS 238
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLGYASNLRV 313
G + + FF +M + PN T+ S+ S C + SL++G V S G SN+R+
Sbjct: 239 GRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRL 298
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N ++ +Y+KCG ++EA LF+ + N+V+WN MI G+ M + EAL
Sbjct: 299 VNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHM-----------SCYKEAL 347
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT--GFLSDVVVGTALVN 431
+F ++ S + P+ TF SIL C+ L AL+ G+ +HA K + V + T+L++
Sbjct: 348 GLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLID 407
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG + A R+F M+T++L +W +MI+GFA H + AL LF M G P+ +T
Sbjct: 408 MYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDIT 467
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
FVG L AC +AG++ YF M ++YK+ P + HY C+ID+F R G +EA +K M
Sbjct: 468 FVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNM 527
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+ +P+ IW + CR H +EL A+ L +L+P++ +Y +L +I+ AGRWEDVA
Sbjct: 528 EMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVA 587
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
++ + ++ + S I + V+ F D +HPQS EI+K+LDE+ + + G+
Sbjct: 588 KIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVP 647
Query: 672 QESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
S L D +E +HSEKLAIAFGL++T + I ++K+ +C +CH+ K+I+
Sbjct: 648 DTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATKLIS 707
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REII RD R H F +G C+C+D+
Sbjct: 708 KIFNREIIARDRNRFHHFKDGSCSCKDY 735
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 196/422 (46%), Gaps = 53/422 (12%)
Query: 23 SSLATLKDKNHTVSYQRSGSKLIQ-LNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLL 81
S T+++ NH + + +I+ L+ + P L + + +++ G + ++ S+
Sbjct: 83 SLFKTIRNPNHVI-----WNHMIRGLSSSESPF--LALEYYVHMISSGTEPNEYTFPSIF 135
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
+ C + + +HAH++K G + FV T L+N+Y + G + A+ VFD + V
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195
Query: 142 SWTSL-------------------------------ISGYVQNSQPELAIHVFLDMLEAG 170
S+T+L ISGY Q+ + E A+ F +M A
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 171 NYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P T+ + L+AC+ S S++LG + +++ + + N L +Y CG L A
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F +I++KNV+SW +IG + L F +M+ I PN+ T SI C +
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANL 375
Query: 290 LSLRVGAQVHSLGIK--LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+L +G VH+ K + + + S++ +Y KCG + A+++FD M+ +L TWNA
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNA 435
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G A H AL +FS++ S G PD TF +LT C L G
Sbjct: 436 MISGFAM-----------HGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLG 484
Query: 408 EQ 409
+
Sbjct: 485 RR 486
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/667 (33%), Positives = 365/667 (54%), Gaps = 17/667 (2%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
E IHA + K G D + V +Y K ++E + F + N+ S +L+SG+
Sbjct: 109 GESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCD 168
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
+ + + +L G P T + L C+S + GK IH V+K D+ +
Sbjct: 169 TETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHL 228
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
NSL ++Y+ CGS N A K F I E++V+SWT +I G GLR F++ML+EG
Sbjct: 229 WNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGF 287
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
PN +T SI C ++ + +G QVH+ +K N V +++ +Y K +++A+
Sbjct: 288 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAET 347
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+F+ + +L W ++AG+AQ G +A+ F ++ G+KP+ +T +
Sbjct: 348 IFNRLIKRDLFAWTVIVAGYAQ-----------DGQGEKAVKCFIQMQREGVKPNEFTLA 396
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S L+ CSR+ L+ G Q+H++ +K G D+ V +ALV+MY KCG +E A VF + +R
Sbjct: 397 SSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSR 456
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+SW ++I G++ H +AL+ FE ML G P++VTF+G L+ACS+ G++ E +F
Sbjct: 457 DTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHF 516
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ K Y I P ++HY C++D+ R G E FI++M N +IW + C+ HGN
Sbjct: 517 NSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGN 576
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+E G AA +L +L+P+ +Y +L ++F + G W+DV V+ L + + SW+
Sbjct: 577 IEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVE 636
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL---TDEESASV--YH 687
+ +V+ F +DG HP+ EI L +L +K GY L +D E + YH
Sbjct: 637 VNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYH 696
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LA+AF LL+T I + K+ +C DCH+F+K I+ +T +E++VRD H F NG
Sbjct: 697 SERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNG 756
Query: 748 HCTCRDF 754
C+C++F
Sbjct: 757 SCSCQNF 763
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 229/422 (54%), Gaps = 18/422 (4%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L EG + +++S+L+ C ++ L+ + IH ++K+G + D + LVNVY KC
Sbjct: 180 IQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC 239
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G+ A KVF +P +VVSWT+LI+G+V + +F ML G P T + L
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISIL 298
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+CSSL + LGKQ+HA +VK + + VG +L +Y+ L A FNR+ ++++
Sbjct: 299 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLF 358
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+WT ++ ++G+ + ++ F +M EG++PNEFTL S S C + +L G Q+HS+
Sbjct: 359 AWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMA 418
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IK G + ++ V ++++ +Y KCG V++A+ +FDG+ + V+WN +I G++Q
Sbjct: 419 IKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQ-------- 470
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLS 421
H G +AL F + G PD TF +L+ CS + +E+G++ ++L+ G
Sbjct: 471 ---HGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITP 527
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSL----SHQALQL 476
+ +V++ + G+ EM T ++ W +++ H A++L
Sbjct: 528 TIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKL 587
Query: 477 FE 478
FE
Sbjct: 588 FE 589
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 230/488 (47%), Gaps = 20/488 (4%)
Query: 100 IVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA 159
++K G D + + LVNVY KC +++ A++V + +P +V W +S + A
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
+ +F M + ++A +SL G+ IHA V KY E D + N+ ++
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
Y S+ + + F + +N+ S ++ + QG R ++L EG +PN +T
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
SI C + L G +H IK G + + NS++ +Y KCG + A K+F +
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
++V+W A+I G G L IF+++ + G P++YTF SIL CS
Sbjct: 255 RDVVSWTALITGFVA------------EGYGSGLRIFNQMLAEGFNPNMYTFISILRSCS 302
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L ++ G+Q+HA +K + VGTALV+MY K +E A +F + R L +WT
Sbjct: 303 SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 362
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
++ G+A +A++ F M GV+PN+ T +L+ CS + M K
Sbjct: 363 IVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAG 422
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ M L+DM+ + GC+E+A FD + D V W+ I G +HG
Sbjct: 423 QSGD-MFVASALVDMYAKCGCVEDAEVVFDGLVSRD----TVSWNTIICGYSQHGQGGKA 477
Query: 577 FYAAEQLL 584
A E +L
Sbjct: 478 LKAFEAML 485
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 180/387 (46%), Gaps = 28/387 (7%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K+I V+K D+ + +SL ++Y C SL A + + ++V W + +
Sbjct: 9 KKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSP 68
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ ++ F M I+ N+F S+ S ++ G +H+ K G+ S++ +
Sbjct: 69 YPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS 128
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+ + +Y+K V+ + F M NL + N +++G D + G
Sbjct: 129 NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFC--------DTETCDQGPR--- 177
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
I +L G +P++YTF SIL C+ L +G+ IH +K+G D + +LVN+Y
Sbjct: 178 ILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 237
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG A +VF E+ R ++SWT++ITGF L++F ML G PN TF+
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFIS 296
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY----MCLIDMFVRLGCIEEA---FDF 547
L +CS+ V LG Q +K +D L+DM+ + +E+A F+
Sbjct: 297 ILRSCSSLSDV--DLGKQVHAQ---IVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 351
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ K D W+V +AG + G E
Sbjct: 352 LIKRDL----FAWTVIVAGYAQDGQGE 374
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 371/683 (54%), Gaps = 18/683 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+LLQ N KS + +HAH++ + ++ T L Y CG M +A+ +FD +
Sbjct: 64 ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL 123
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N W +I GY N P ++ ++ +ML G N T L AC L + +G+++
Sbjct: 124 KNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRV 183
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H+ VV E D VGNSL ++Y+ G + +A F+R+ E+++ SW T+I +N ++
Sbjct: 184 HSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADS 243
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS-NLRVRNS 316
F M G+ + TL + S C + +++ G +H ++ + N NS
Sbjct: 244 GTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNS 303
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y C + +A++LF+ + + V+WN+MI G+A+ D E+L +F
Sbjct: 304 LIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGD-----------AFESLRLF 352
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G PD TF ++L C ++ AL G IH+ +K GF ++ +VGTALV+MY KC
Sbjct: 353 RRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKC 412
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + + RVF EM ++L+SW++M+ G+ H +A+ + + M V P+ F L
Sbjct: 413 GSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSIL 472
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS+AG+V E F M+KEY +KP + HY C++D+ R G ++EA+ I+ M+ +P
Sbjct: 473 SACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPT 532
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
IW+ + R H N++L +A+++ + PK SY L +I+ + RW+DV V+ +
Sbjct: 533 SDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAM 592
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
R + L ++ S+I + + V+ F D H Q+ +I+ L+EL ++ K GYK S
Sbjct: 593 VRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLV 652
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
D +E HSE+LAIAF L+NT + I + K+ +C DCH K+I+ LT R
Sbjct: 653 FYDVEEEVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGR 712
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EII+RD R H F+ G C+C D+
Sbjct: 713 EIIMRDIHRFHHFIKGFCSCGDY 735
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 223/432 (51%), Gaps = 20/432 (4%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P++SL + L G + +Y +L+ C + + +H+ +V G D
Sbjct: 139 NGLPMKSLVLYREM--LCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V L+ +Y K G+M A+ VFD + ++ SW ++ISGY +N+ A VF M +A
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNS 228
G + TL L+AC+ L++++ GK IH Y V+ + + NSL +Y C +
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F R+R K+ +SW ++I NG+A + LR F +M +G P++ T ++ C
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQ 376
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +LR G +HS +K G+ +N V +++ +Y KCG + ++++FD M +LV+W+AM
Sbjct: 377 IAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAM 436
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+AG+ H G EA+SI + ++ + PD F+SIL+ CS + +G+
Sbjct: 437 VAGYG-----------LHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGK 485
Query: 409 QI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFAN 466
+I + + + + + +V++ + G ++ A + M + T W +++T
Sbjct: 486 EIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA--- 542
Query: 467 HSLSHQALQLFE 478
S H+ ++L E
Sbjct: 543 -SRLHKNIKLAE 553
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 210/407 (51%), Gaps = 24/407 (5%)
Query: 172 YP-TNVTLGTALTACSSLESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSA 229
YP T++ G L + ++ +S + G+Q+HA+++ + E++T + L + Y+ CG ++ A
Sbjct: 55 YPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQA 114
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+ I KN W +I NG ++ L + +ML G + + FT + CG +
Sbjct: 115 EVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL 174
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L + +G +VHS + G S++ V NS++ +Y K G + A+ +FD M+ +L +WN MI
Sbjct: 175 LLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMI 234
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G+A+ D GT A +F + +G+ D T +L+ C+ L A+++G+
Sbjct: 235 SGYAKNAD----------SGT-AFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKV 283
Query: 410 IHALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH ++ + + +L+ MY C + A R+F + + +SW SMI G+A +
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDH 527
+ ++L+LF M L G P+QVTF+ L AC A + Y + +++K + ++
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVG- 402
Query: 528 YMCLIDMFVRLG---CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
L+DM+ + G C FD + + + V WS +AG HG
Sbjct: 403 -TALVDMYSKCGSLACSRRVFDEMP----DKSLVSWSAMVAGYGLHG 444
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/696 (32%), Positives = 386/696 (55%), Gaps = 17/696 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++ G ++ + ++ + + + +S++ E +H +I+K+G + V LV Y K
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHR 245
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+KVFD + +V+SW S+I+GYV N E + VF+ ML +G T+ +
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAG 305
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ I LG+ +H + VK + N+L +YS CG L+SA F + ++V+S+
Sbjct: 306 CADSRLISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSY 365
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T++I G A + ++ F +M EGI P+ +T+T++ + C L G +VH +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKE 425
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
++ V N++M +Y KCG + EA+ +F M ++++WN +I G+ S
Sbjct: 426 NDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGY-----------S 474
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ EALS+F+ L PD T + +L C+ L A ++G +IH ++ G+ SD
Sbjct: 475 KNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V +LV+MY KCG + A +F +++++ L+SWT MI G+ H +A+ LF M A
Sbjct: 535 HVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+ P++++FV L ACS++G+V E +F +M+ E KI+P ++HY C++DM R G + +
Sbjct: 595 GIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSK 654
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+ FI+ M P+ IW + GCR H +++L AE++ +L+P++ Y ++ +I+
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAE 714
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A +WE+V ++ + L + SWI IK +V F D +P++ +I L + +
Sbjct: 715 AEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRAR 774
Query: 664 AKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY + L D +E A HSEKLA+A G++++ I V K+ +C DC
Sbjct: 775 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K ++ LT REI++RDS R H+F +GHC+CR F
Sbjct: 835 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 166/563 (29%), Positives = 294/563 (52%), Gaps = 39/563 (6%)
Query: 23 SSLATLKDKNHTVS-YQRSGSKLIQLNGNSEPVR---SLGFQEALSVLTEGPK--VQTSS 76
+SL T+ D+ +++ + RS + + N++ R S + A+ +L K + +
Sbjct: 42 ASLRTVSDRADSITTFDRSVT-----DANTQLRRFCESGNLKNAVKLLHVSGKWDIDPRT 96
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
S+LQ C + KSL + + + I G D + + L +Y CG+++EA +VFD +
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVK 156
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ W L++ ++ +I +F M+ +G + T + SSL S+ G+Q
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQ 216
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H Y++K + SVGNSL + Y ++SA K F+ + E++V+SW ++I NG
Sbjct: 217 LHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
A +GL F +ML GI+ + T+ S+ + C + +G VH G+K ++ R N+
Sbjct: 277 AEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNT 336
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG +D A+ +F MS ++V++ +MIAG+ A++ L+ EA+ +F
Sbjct: 337 LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGY------AREGLAG-----EAVKLF 385
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G+ PD+YT +++L C+R L++G+++H + D+ V AL++MY KC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKC 445
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR--PNQVTFVG 494
G + A VF EM + +ISW ++I G++ + +++AL LF ++LL R P++ T
Sbjct: 446 GSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLF-NLLLVEKRFSPDERTVAC 504
Query: 495 ALAACSNAGMV---YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFI 548
L AC++ E GY M + + V + L+DM+ + G + A FD I
Sbjct: 505 VLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANS---LVDMYAKCGALLLARLLFDDI 560
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
D V W+V IAG HG
Sbjct: 561 TSKDL----VSWTVMIAGYGMHG 579
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 229/460 (49%), Gaps = 27/460 (5%)
Query: 23 SSLATLKDKNHTVSYQR------SGSKLIQLNGNSEPVRSLGFQE-ALSVLTE----GPK 71
+SL KNH V R + +I N S G E LSV + G +
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIE 293
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ ++ VS+ C + + +S +H VK S +D F T L+++Y KCG+++ A+
Sbjct: 294 IDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNT-LLDMYSKCGDLDSAKV 352
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF + +VVS+TS+I+GY + A+ +F +M E G P T+ L C+
Sbjct: 353 VFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRL 412
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK++H ++ + D V N+L +Y+ CGS+ A F+ +R K+++SW TVIG
Sbjct: 413 LDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGG 472
Query: 251 CGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+N A + L F+ +L E P+E T+ + C ++ + G ++H ++ GY S
Sbjct: 473 YSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V NS++ +Y KCG + A+ LFD ++ +LV+W MIAG+ H G
Sbjct: 533 DRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGM-----------HGFG 581
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA- 428
EA+++F+++ +G++PD +F S+L CS +++G + + + V A
Sbjct: 582 KEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYAC 641
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
+V+M + G + +A R M + W +++ G H
Sbjct: 642 IVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/755 (32%), Positives = 391/755 (51%), Gaps = 76/755 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + +L+ C S H I G + F+ LV +Y +CG+
Sbjct: 153 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 212
Query: 125 MEEAQKVFDNLPRI---NVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTN----- 175
+EEA +FD + + +V+SW S++S +V++S A+ +F M L PTN
Sbjct: 213 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 272
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+++ L AC SL+++ K++H ++ T D VGN+L Y+ CG + +A+K FN
Sbjct: 273 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 236 IREKNVMSW-----------------------------------TTVIGACGENGEAVQG 260
+ K+V+SW T VI + G + +
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK----------LGYASN 310
L F +M+ G PN T+ S+ S C ++ + G ++H+ +K G +
Sbjct: 393 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 452
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
L V N+++ +Y KC A+ +FD + N+VTW MI GHAQ D
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD----------- 501
Query: 369 GTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL--SDVV 424
+AL +F ++ S G+ P+ YT S IL C+ L A+ G+QIHA L+ S
Sbjct: 502 SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYF 561
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V L++MY KCG ++ A VF MS ++ ISWTSM+TG+ H +AL +F+ M AG
Sbjct: 562 VANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 621
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ +TF+ L ACS+ GMV + L YF+ M +Y + P +HY C ID+ R G +++A
Sbjct: 622 FVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKA 681
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ +K M EP V+W ++ CR H N+EL +A +L+++ ++ SY ++ +I+ +A
Sbjct: 682 WRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATA 741
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GRW+DVA +++L ++ + + SW++ + SF D HP S +I+ +L+ L+++
Sbjct: 742 GRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI 801
Query: 665 KCFGYKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY + +F L DEE + V HSEKLA+A+GLL T PI + K+ +C DCH
Sbjct: 802 KAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCH 861
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I+ + EI+VRD R H F NG C+C +
Sbjct: 862 SAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 896
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 176/657 (26%), Positives = 296/657 (45%), Gaps = 110/657 (16%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG----------------SHQDFF-- 110
G V S + SLL+EC KS + IH I+ +G + F
Sbjct: 39 GVDVYPSHFASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 95
Query: 111 --VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+ T +V Y CG + A V + + V W LI +++ + + AI+V ML
Sbjct: 96 RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
AG P + TL L AC L S R G H + E + + N+L ++YS CGSL
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215
Query: 229 AIKAFNRIREK---NVMSWTTVIGACGENGEAVQGLRFFSKM--LSEGIQPNE----FTL 279
A F+ I ++ +V+SW +++ A ++ A L FSKM + NE ++
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+I CG++ ++ +VH I+ G ++ V N+++ Y KCGL++ A K+F+ M
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335
Query: 340 VNLVTWNAMIAGHAQ----------MMDLAKDDL--------------SAHNGGTEALSI 375
++V+WNAM+AG++Q ++ K+++ S EAL++
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS----------DVVV 425
F ++ SG P+ T S+L+ C+ L A QG +IHA +LK L+ D++V
Sbjct: 396 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 455
Query: 426 GTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
AL++MY KC + A +F + + R +++WT MI G A + S+ AL+LF +M+
Sbjct: 456 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 515
Query: 484 --GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-CLIDMFVRLGC 540
GV PN T L AC++ + + + ++ + CLIDM+ + G
Sbjct: 516 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 575
Query: 541 IEEA----------------------------------FDFIKKMDFEPNEVIWSVFIAG 566
++ A FD ++K F P+++ + V +
Sbjct: 576 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 635
Query: 567 CRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTRE 619
C G ++ G F + L P+ E YA +D+ +GR + VK++ E
Sbjct: 636 CSHCGMVDQGLSYFDSMSADYGLTPR-AEHYACAIDLLARSGRLDKAWRTVKDMPME 691
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 237/481 (49%), Gaps = 70/481 (14%)
Query: 59 FQEALSVLTEGPKVQTS---SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
F + ++ E P + S S V++L C + K++ + +H + ++ G+ D FV L
Sbjct: 254 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 313
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL----------------- 158
++ Y KCG ME A KVF+ + +VVSW ++++GY Q+ E
Sbjct: 314 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 373
Query: 159 ------------------AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
A+++F M+ +G+ P VT+ + L+AC+SL + G +IHAY
Sbjct: 374 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 433
Query: 201 VVK---------YQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVI 248
+K + ED D V N+L +YS C S +A F+ I E+NV++WT +I
Sbjct: 434 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 493
Query: 249 GACGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
G + G++ L+ F +M+SE G+ PN +T++ I C + ++R+G Q+H+ ++
Sbjct: 494 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH 553
Query: 307 Y--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+S V N ++ +Y KCG VD A+ +FD MS + ++W +M+ G+
Sbjct: 554 RYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM---------- 603
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDV 423
H G+EAL IF K+ +G PD TF +L CS ++QG +++ G
Sbjct: 604 -HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 662
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS---LSHQALQLFED 479
+++ + GR+++A R +M T + W ++++ HS L+ AL +
Sbjct: 663 EHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 722
Query: 480 M 480
M
Sbjct: 723 M 723
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/755 (32%), Positives = 391/755 (51%), Gaps = 76/755 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + +L+ C S H I G + F+ LV +Y +CG+
Sbjct: 146 MLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 205
Query: 125 MEEAQKVFDNLPRI---NVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTN----- 175
+EEA +FD + + +V+SW S++S +V++S A+ +F M L PTN
Sbjct: 206 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 265
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+++ L AC SL+++ K++H ++ T D VGN+L Y+ CG + +A+K FN
Sbjct: 266 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 236 IREKNVMSW-----------------------------------TTVIGACGENGEAVQG 260
+ K+V+SW T VI + G + +
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK----------LGYASN 310
L F +M+ G PN T+ S+ S C ++ + G ++H+ +K G +
Sbjct: 386 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 445
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
L V N+++ +Y KC A+ +FD + N+VTW MI GHAQ D
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD----------- 494
Query: 369 GTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL--SDVV 424
+AL +F ++ S G+ P+ YT S IL C+ L A+ G+QIHA L+ S
Sbjct: 495 SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYF 554
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V L++MY KCG ++ A VF MS ++ ISWTSM+TG+ H +AL +F+ M AG
Sbjct: 555 VANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 614
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ +TF+ L ACS+ GMV + L YF+ M +Y + P +HY C ID+ R G +++A
Sbjct: 615 FVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKA 674
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ +K M EP V+W ++ CR H N+EL +A +L+++ ++ SY ++ +I+ +A
Sbjct: 675 WRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATA 734
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GRW+DVA +++L ++ + + SW++ + SF D HP S +I+ +L+ L+++
Sbjct: 735 GRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI 794
Query: 665 KCFGYKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY + +F L DEE + V HSEKLA+A+GLL T PI + K+ +C DCH
Sbjct: 795 KAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCH 854
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I+ + EI+VRD R H F NG C+C +
Sbjct: 855 SAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 889
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 176/657 (26%), Positives = 296/657 (45%), Gaps = 110/657 (16%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG----------------SHQDFF-- 110
G V S + SLL+EC KS + IH I+ +G + F
Sbjct: 32 GVDVYPSHFASLLKEC---KSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISP 88
Query: 111 --VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+ T +V Y CG + A V + + V W LI +++ + + AI+V ML
Sbjct: 89 RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
AG P + TL L AC L S R G H + E + + N+L ++YS CGSL
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208
Query: 229 AIKAFNRIREK---NVMSWTTVIGACGENGEAVQGLRFFSKM--LSEGIQPNE----FTL 279
A F+ I ++ +V+SW +++ A ++ A L FSKM + NE ++
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 268
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+I CG++ ++ +VH I+ G ++ V N+++ Y KCGL++ A K+F+ M
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328
Query: 340 VNLVTWNAMIAGHAQ----------MMDLAKDDL--------------SAHNGGTEALSI 375
++V+WNAM+AG++Q ++ K+++ S EAL++
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS----------DVVV 425
F ++ SG P+ T S+L+ C+ L A QG +IHA +LK L+ D++V
Sbjct: 389 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 448
Query: 426 GTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
AL++MY KC + A +F + + R +++WT MI G A + S+ AL+LF +M+
Sbjct: 449 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508
Query: 484 --GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-CLIDMFVRLGC 540
GV PN T L AC++ + + + ++ + CLIDM+ + G
Sbjct: 509 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568
Query: 541 IEEA----------------------------------FDFIKKMDFEPNEVIWSVFIAG 566
++ A FD ++K F P+++ + V +
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628
Query: 567 CRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTRE 619
C G ++ G F + L P+ E YA +D+ +GR + VK++ E
Sbjct: 629 CSHCGMVDQGLSYFDSMSADYGLTPR-AEHYACAIDLLARSGRLDKAWRTVKDMPME 684
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/481 (28%), Positives = 237/481 (49%), Gaps = 70/481 (14%)
Query: 59 FQEALSVLTEGPKVQTS---SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
F + ++ E P + S S V++L C + K++ + +H + ++ G+ D FV L
Sbjct: 247 FSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNAL 306
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL----------------- 158
++ Y KCG ME A KVF+ + +VVSW ++++GY Q+ E
Sbjct: 307 IDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDV 366
Query: 159 ------------------AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
A+++F M+ +G+ P VT+ + L+AC+SL + G +IHAY
Sbjct: 367 VTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAY 426
Query: 201 VVK---------YQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVI 248
+K + ED D V N+L +YS C S +A F+ I E+NV++WT +I
Sbjct: 427 SLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 486
Query: 249 GACGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
G + G++ L+ F +M+SE G+ PN +T++ I C + ++R+G Q+H+ ++
Sbjct: 487 GGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHH 546
Query: 307 Y--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+S V N ++ +Y KCG VD A+ +FD MS + ++W +M+ G+
Sbjct: 547 RYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM---------- 596
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDV 423
H G+EAL IF K+ +G PD TF +L CS ++QG +++ G
Sbjct: 597 -HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 655
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS---LSHQALQLFED 479
+++ + GR+++A R +M T + W ++++ HS L+ AL +
Sbjct: 656 EHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 715
Query: 480 M 480
M
Sbjct: 716 M 716
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 220/680 (32%), Positives = 376/680 (55%), Gaps = 18/680 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + ++ +H I K G D + L+++Y K + EA++VF +
Sbjct: 227 SVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ V+W ++I GY Q + E ++ +F+DM++ G P +++ + + AC +++GK +H
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVH 345
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
Y++ E DT N L +Y+ CG L +A + F+ + K+ ++W ++I ++G
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+GL F KM+ +P+ T + S+ + + G +H IK G+ + L + NS++
Sbjct: 406 EGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG +D+ K+F MS ++++WN +IA D T + ++
Sbjct: 465 DVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDC-----------TVGFQMINE 513
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + G+ PD T IL +CS L QG++IH K+GF S+V +G AL+ MY KCG
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+E +VF M + +++WT++I+ F + +AL+ F+DM L+GV P+ V F+ + A
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS++GMV E L +F+ M+ +Y ++P M+HY C++D+ R G + +A +FI M +P+
Sbjct: 634 CSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDAS 693
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR GN + ++++L+L D Y ++ +I+ + G+W+ V V+N +
Sbjct: 694 LWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMK 753
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ L + SWI I+ +VY F+ D Q ++ +L+ LV GY F L
Sbjct: 754 TKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALH 813
Query: 679 DEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
D E HSE+LAIAFGLLNT SP+LV+K+ +C DCH K IT + REI
Sbjct: 814 DVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLVMKNLRVCGDCHTVTKYITKIMQREI 873
Query: 734 IVRDSKRLHKFVNGHCTCRD 753
+VRD+ R H+F +G C+C D
Sbjct: 874 LVRDANRFHRFKDGACSCGD 893
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 269/560 (48%), Gaps = 29/560 (5%)
Query: 23 SSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLG----FQEALSVLTE--GPKVQTSS 76
S A +KD +VS RS S + + +R+L F +AL TE K+Q +
Sbjct: 62 SKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDA 121
Query: 77 YV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+ S++ C L I+H H ++ G D ++ L+++Y + +++ A+ VF+
Sbjct: 122 FTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEE 181
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + VSW SLISGY N E A+ ++ G P T+ + L AC SL +++ G
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+H + K D +GN L S+Y L A + F+++ K+ ++W T+I +
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ F M+ +G P+ ++TS CG L+VG VH I G+ +
Sbjct: 302 GRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N ++ +Y KCG + AQ++FD + VTWN++I G+ Q + G E+
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQS--------GYYKEGLESF- 411
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
K+ KPD TF +L+I S+L + QG IH +K GF +++++G +L+++Y
Sbjct: 412 ---KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG ++ +VF MS +ISW ++I + Q+ +M G+ P++ T +G
Sbjct: 469 KCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528
Query: 495 ALAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
L CS + E GY E + P+ + LI+M+ + G +E K M
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNV-PIGN---ALIEMYSKCGSLENCIKVFKYM 584
Query: 552 DFEPNEVIWSVFIAGCRRHG 571
E + V W+ I+ +G
Sbjct: 585 K-EKDVVTWTALISAFGMYG 603
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 243/502 (48%), Gaps = 20/502 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PR 137
SLL+ + K+ +H+ I+ +G L++ Y + + + VF ++ P
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
NV W S+I N A+ + +M E P T + + +C+ + + LG +
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H + ++ E D +GN+L +YS L++A F + ++ +SW ++I NG
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
L + K G+ P+ FT++S+ CG++++++ G VH + K+G A ++ + N +
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y K + EA+++F M+ + VTWN MI G+AQ L H ++ +F
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ--------LGRHEA---SVKLFM 312
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ G PD+ + +S + C + L+ G+ +H + +GF D V L++MY KCG
Sbjct: 313 DM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCG 371
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
+ A VF + ++W S+I G+ + L+ F+ M+ +P+ VTFV L+
Sbjct: 372 DLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLS 430
Query: 498 ACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
S + + G + ++++ ++ + ++ + L+D++ + G +++ M +
Sbjct: 431 IFSQLADINQGRGIHCDVIKFGFEAELIIGN--SLLDVYAKCGEMDDLLKVFSYM--SAH 486
Query: 557 EVI-WSVFIAGCRRHGNMELGF 577
++I W+ IA + +GF
Sbjct: 487 DIISWNTVIASSVHFDDCTVGF 508
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 112/226 (49%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
E+ ++ K + ++V LL ++ IH ++K G + + L++VY
Sbjct: 409 ESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG M++ KVF + +++SW ++I+ V + + +M G P T+
Sbjct: 469 KCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L CS L R GK+IH Y+ K E + +GN+L +YS CGSL + IK F ++EK+
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
V++WT +I A G GE + L+ F M G+ P+ + C
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFAC 634
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++GFQ + TEG ++ + +L C + IH +I K+G + + L
Sbjct: 505 TVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNAL 564
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG++E KVF + +VV+WT+LIS + + + A+ F DM +G P +
Sbjct: 565 IEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDS 624
Query: 176 VTLGTALTACSSLESIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V + ACS ++ G + + Y E + L + G L A +
Sbjct: 625 VAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFIL 684
Query: 235 RIREKNVMS-WTTVIGACGENGEAVQGLRFFSKML 268
+ K S W ++ AC G R K+L
Sbjct: 685 SMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL 719
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/682 (32%), Positives = 381/682 (55%), Gaps = 19/682 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+L++ KS S A+ +HA ++T S + ++++Y + EA VF L
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQS-LSHTSASIVISIYTNLKLLHEALLVFKTLESP 68
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V++W S+I + S A+ F++M +G P + + L +C+ + +R G+ +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++V+ + D GN+L ++YS ++S K F + K+V+S+ TVI ++G
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYE 188
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
LR +M + ++P+ FTL+S+ + + + G ++H I+ G S++ + +S++
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLV 248
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFS 377
+Y K +++++++F + + ++WN+++AG+ Q NG EAL +F
Sbjct: 249 DMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQ------------NGRYNEALRLFR 296
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
++ S+ ++P FSS++ C+ L L G+Q+H L+ GF ++ + +ALV+MY KCG
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCG 356
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
I+ A ++F M+ +SWT++I G A H H+A+ LFE+M GV+PNQV FV L
Sbjct: 357 NIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 416
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
ACS+ G+V EA GYF M K Y + ++HY + D+ R G +EEA+DFI KM EP
Sbjct: 417 ACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTG 476
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+WS ++ C H N+EL AE++ + ++ +Y ++ +++ S GRW+++A ++
Sbjct: 477 SVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRV 536
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
R++ L + SWI +K+K + F D HP I + L ++E+ + GY S L
Sbjct: 537 RKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVL 596
Query: 678 --TDEESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
DEE HSE+LA+AFG++NT + I V K+ +C DCH IK I+ +T RE
Sbjct: 597 HDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITERE 656
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
IIVRD+ R H F G C+C D+
Sbjct: 657 IIVRDNSRFHHFNRGSCSCGDY 678
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 214/415 (51%), Gaps = 17/415 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F AL+ E G + + S+L+ C L E +H IV+ G D +
Sbjct: 86 FSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y K ++ +KVF+ +PR +VVS+ ++I+GY Q+ E A+ + +M + P
Sbjct: 146 LMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPD 205
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
TL + L S + GK+IH YV++ + D +G+SL +Y+ + + + F+
Sbjct: 206 AFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 265
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++ +SW +++ +NG + LR F +M+S ++P +S+ C + +L +
Sbjct: 266 HLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL 325
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H ++ G+ N+ + ++++ +Y KCG + A+K+FD M+ + V+W A+I GHA
Sbjct: 326 GKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHA- 384
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHAL 413
H G EA+S+F ++ G+KP+ F ++LT CS + +++ +++
Sbjct: 385 ----------LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSM 434
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
T G ++ A+ ++ + G++E A +M S W+++++ + H
Sbjct: 435 TKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 351/582 (60%), Gaps = 18/582 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ LT C S +IR G+++HA+++K E + L LY+ C L A + + + E+
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I + G A + L F +ML G PNEFT ++ + C + ++G Q+H
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
SL IK + S++ V +S++ +Y K G + EA+++FDG+ ++V+ A+I+G+AQ L
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ---LG 191
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
D+ EAL +F +L GM+ + T++S+LT S L AL+ G Q+H+ L+
Sbjct: 192 LDE--------EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 243
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
VV+ +L++MY KCG + + R+F M RT+ISW +M+ G++ H L +A++LF+
Sbjct: 244 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 303
Query: 480 MLLAG-VRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M V+P+ VTF+ L+ CS+ GM L ++EM+ ++ +P ++HY C++D+F R
Sbjct: 304 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 363
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G +EEAF+FIKKM FEP IW + CR H N+ +G + A +LL+++ ++ +Y +L
Sbjct: 364 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVIL 423
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+++ SAGRW+DV V+ L +E+ + + SWI + +++F +D HP+ E+F +
Sbjct: 424 SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV 483
Query: 658 DELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKST 712
EL K K GY + S +++ DE+ + HSEKLA+AFGL+ TP +P+ ++K+
Sbjct: 484 RELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNL 543
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHNF K ++ + RE+ +RD R H V G C+C D+
Sbjct: 544 RICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDY 585
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 124/408 (30%), Positives = 220/408 (53%), Gaps = 15/408 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G +V+ Y S+L EC+++ ++ + +HAH++KT ++ T L+ +Y KC + +
Sbjct: 4 QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++V D +P NVVSWT++ISGY Q A+H+F++ML +G P T T LT+C+S
Sbjct: 64 ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+LG+QIH+ V+K E VG+SL +Y+ G + A + F+ + E++V+S T +
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAI 183
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + G + L F ++ EG++ N T S+ + + +L G QVHS ++
Sbjct: 184 ISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 243
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ ++NS++ +Y KCG + ++++FD M +++WNAM+ G+ S H
Sbjct: 244 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGY-----------SKHG 292
Query: 368 GGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQI--HALTLKTGFLSDVV 424
G EA+ +F + +KPD TF ++L+ CS ++G +I + K GF ++
Sbjct: 293 LGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIE 352
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSH 471
+V+++ + GR+E A +M T W S++ H H
Sbjct: 353 HYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH 400
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 143/292 (48%), Gaps = 4/292 (1%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L G ++ ++L C + IH+ ++KT FV + L+++Y K
Sbjct: 100 VEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKA 159
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + EA++VFD LP +VVS T++ISGY Q E A+ +F + G VT + L
Sbjct: 160 GKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVL 219
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
TA S L ++ G+Q+H++V++ + + NSL +YS CGSL + + F+ + E+ V+
Sbjct: 220 TALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVI 279
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVC--GTMLSLRVGAQVH 299
SW ++ ++G + + F M E ++P+ T ++ S C G M +
Sbjct: 280 SWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYE 339
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ K G+ + ++ L+ + G V+EA + M W +++
Sbjct: 340 MVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 391
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 100/179 (55%), Gaps = 16/179 (8%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G++ + + S+LT C A+ +G+++HA +KT + V + T L+ +Y KC + A
Sbjct: 5 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 64
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
RV EM R ++SWT+MI+G++ + +AL LF +ML++G PN+ TF L +C+++
Sbjct: 65 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 124
Query: 503 GMVYEALGYFEMMQKEYK--IKPVMDHYM----CLIDMFVRLGCIEEA---FDFIKKMD 552
F++ ++ + IK + ++ L+DM+ + G I EA FD + + D
Sbjct: 125 SG-------FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERD 176
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/687 (33%), Positives = 390/687 (56%), Gaps = 23/687 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +++ C N L + +H ++K G D ++ ++ Y + G + A +FDN+
Sbjct: 144 TFPPVIRACGN---LDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNM 200
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
++ +W ++ISG+ N + A+ VF +M +VT+ + L C L+ I G
Sbjct: 201 MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGV 260
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH Y +K E D V N+L ++Y+ G L SA FN+++ ++++SW +++ A +N
Sbjct: 261 LIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNK 320
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVR 314
+ V L ++KM S G+ P+ TL S++SV + + +H + + ++ +
Sbjct: 321 KPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG 380
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
N+I+ +Y K G +D A+K+F+G+ ++++WN++I G++Q NG EA+
Sbjct: 381 NAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQ------------NGLANEAI 428
Query: 374 SIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++S + SG P+ T+ SILT S+L AL+QG + H +K D+ V T LV+M
Sbjct: 429 DVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDM 488
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG++ A +F E+ ++ +SW ++I+ H +A++LF++M GV+P+ +TF
Sbjct: 489 YGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITF 548
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
V L+ACS++G+V E F++MQ+ Y I+P + HY C++D+F R G +E+AF+F+K M
Sbjct: 549 VSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMP 608
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
P+ +W + CR H N+EL ++ LLK++ ++ Y +L +I+ G WE V
Sbjct: 609 VRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDE 668
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V++L R+ L +T WS I + K+ F + HP+ EI+ L L K K GY
Sbjct: 669 VRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPD 728
Query: 673 ESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
+F L D +E+ HSE+LA+AFG+++TP + + + K+ +C DCHN K I+
Sbjct: 729 YNFVLQDVEDDEKENILTSHSERLAMAFGIISTPPKTTLQIFKNLRVCGDCHNATKFISK 788
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T REIIVRDS R H F +G C+C D+
Sbjct: 789 ITEREIIVRDSNRFHHFKDGVCSCGDY 815
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 259/525 (49%), Gaps = 27/525 (5%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A+ +HA +V +G Q F+ L+N Y G++ A+ FD + +V +W S+IS Y +
Sbjct: 59 AKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYAR 118
Query: 153 NSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
A+ F + L ++ T + AC +L+ G+++H V+K E D
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDVY 175
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
+ S YS G ++ A F+ + +++ +W +I NG+ + L F +M +
Sbjct: 176 IAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKS 235
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ + T++S+ +C + + G +H IKLG +L V N+++ +Y K G + A+
Sbjct: 236 VSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAE 295
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+F+ M ++V+WN+++A Q + AL +++K++S G+ PDL T
Sbjct: 296 TIFNQMKVRDIVSWNSLLAAFEQ-----------NKKPVIALGVYNKMHSIGVVPDLLTL 344
Query: 392 SSILTICSRLVALEQGEQIHA-LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
S+ ++ + L IH +T + FL D+ +G A+++MY K G I+ A +VF +
Sbjct: 345 VSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLP 404
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ +ISW S+ITG++ + L+++A+ ++ M +G PNQ T+V L A S G + + +
Sbjct: 405 VKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGM 464
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA--GC 567
+ K + + CL+DM+ + G + +A ++ + + V W+ I+ G
Sbjct: 465 KAHGQLIKNFLYFDIFVS-TCLVDMYGKCGKLADALSLFYEVPHQ-SSVSWNAIISCHGL 522
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI-----FVSAGRW 607
+G + + Q +KP D ++ LL V G+W
Sbjct: 523 HGYGLKAVKLFKEMQSEGVKP-DHITFVSLLSACSHSGLVDEGQW 566
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 197/449 (43%), Gaps = 58/449 (12%)
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ L KQ+HA +V + L + Y+ G + A F++I+ K+V +W ++I A
Sbjct: 56 VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115
Query: 251 CGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
G + F++ LS +Q + +T + CG +L G +VH L +KLG+
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACG---NLDDGRKVHCLVLKLGFEC 172
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ + S ++ Y + G V A LFD M ++ TWNAMI+G +A
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVA---------- 222
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL +F ++ + D T SS+L IC +L + G IH +K G D+ V AL
Sbjct: 223 -EALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNAL 281
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+NMY K G + A +F +M R ++SW S++ F + AL ++ M GV P+
Sbjct: 282 INMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDL 341
Query: 490 VTFVGALAACSNAGM-----------------------------VYEALGYFEMMQKEYK 520
+T V + + G +Y LG+ + +K ++
Sbjct: 342 LTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFE 401
Query: 521 IKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMDFE----PNEVIWSVFIAGCRRHGNME 574
PV D + LI + + G EA D M + PN+ W + + G ++
Sbjct: 402 GLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALK 461
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
G A QL+K + DIFVS
Sbjct: 462 QGMKAHGQLIK--------NFLYFDIFVS 482
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
F+ I C+++ +Q+HAL + +G + + L+N Y G I A F ++
Sbjct: 46 FNRIFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ 102
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACSN 501
T+ + +W SMI+ +A H A+ F + L + ++ + TF + AC N
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN 154
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/582 (36%), Positives = 351/582 (60%), Gaps = 18/582 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ LT C S +IR G+++HA+++K E + L LY+ C L A + + + E+
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I + G A + L F +ML G PNEFT ++ + C + ++G Q+H
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
SL IK + S++ V +S++ +Y K G + EA+++FDG+ ++V+ A+I+G+AQ L
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQ---LG 658
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
D+ EAL +F +L GM+ + T++S+LT S L AL+ G Q+H+ L+
Sbjct: 659 LDE--------EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKL 710
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
VV+ +L++MY KCG + + R+F M RT+ISW +M+ G++ H L +A++LF+
Sbjct: 711 PFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKL 770
Query: 480 MLLAG-VRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M V+P+ VTF+ L+ CS+ GM L ++EM+ ++ +P ++HY C++D+F R
Sbjct: 771 MKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGR 830
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G +EEAF+FIKKM FEP IW + CR H N+ +G + A +LL+++ ++ +Y +L
Sbjct: 831 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVIL 890
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+++ SAGRW+DV V+ L +E+ + + SWI + +++F +D HP+ E+F +
Sbjct: 891 SNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKV 950
Query: 658 DELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKST 712
EL K K GY + S +++ DE+ + HSEKLA+AFGL+ TP +P+ ++K+
Sbjct: 951 RELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNL 1010
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHNF K ++ + RE+ +RD R H V G C+C D+
Sbjct: 1011 RICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDY 1052
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 222/413 (53%), Gaps = 15/413 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + +G +V+ Y S+L EC+++ ++ + +HAH++KT ++ T L+ +Y KC
Sbjct: 466 LEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKC 525
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
+ +A++V D +P NVVSWT++ISGY Q A+H+F++ML +G P T T L
Sbjct: 526 RCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVL 585
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
T+C+S +LG+QIH+ V+K E VG+SL +Y+ G + A + F+ + E++V+
Sbjct: 586 TSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVV 645
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
S T +I + G + L F ++ EG++ N T S+ + + +L G QVHS
Sbjct: 646 SCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHV 705
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++ + ++NS++ +Y KCG + ++++FD M +++WNAM+ G+
Sbjct: 706 LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGY---------- 755
Query: 363 LSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQI--HALTLKTGF 419
S H G EA+ +F + +KPD TF ++L+ CS ++G +I + K GF
Sbjct: 756 -SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 814
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSH 471
++ +V+++ + GR+E A +M T W S++ H H
Sbjct: 815 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVH 867
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 100/179 (55%), Gaps = 16/179 (8%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G++ + + S+LT C A+ +G+++HA +KT + V + T L+ +Y KC + A
Sbjct: 472 GLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDA 531
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
RV EM R ++SWT+MI+G++ + +AL LF +ML++G PN+ TF L +C+++
Sbjct: 532 RRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSS 591
Query: 503 GMVYEALGYFEMMQKEYK--IKPVMDHYM----CLIDMFVRLGCIEEA---FDFIKKMD 552
F++ ++ + IK + ++ L+DM+ + G I EA FD + + D
Sbjct: 592 SG-------FQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERD 643
>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 695
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/682 (34%), Positives = 376/682 (55%), Gaps = 19/682 (2%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LQ C L +HA +V +G+ F+ L+ +Y C ++ A ++FD +PR N
Sbjct: 24 LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+VSWT+L+SG QNS A+ F M AG PT L +A A ++L + G Q+H
Sbjct: 84 LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V+ + + V ++L +YS G L A + F+++ +K+ ++WT +I +NG
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203
Query: 260 GLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ F M EG + ++ L S+ S G + + +HS +K G+ + VRN++
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263
Query: 319 YLYLKCGLVDEAQKLFD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+Y K +D A ++ +N+V+ ++I G+ + + K AL +F
Sbjct: 264 DMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEK-----------ALLMFI 312
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+L G++P+ +TFSS++ C+ LEQG Q+HA +KT +SD V + L++MY KCG
Sbjct: 313 ELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCG 372
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
I + ++F E+ T I+W + I A H +A++ F+ M +G+RPN +TFV L
Sbjct: 373 LISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLT 432
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
ACS+AG+V E L YF M+ + I+P +HY C+IDM+ R G ++EA FI +M +PN
Sbjct: 433 ACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNA 492
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
W + CR GN ELG AA+ ++KL+P + + L I+ S G+WEDV V+ L
Sbjct: 493 YGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLM 552
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF-- 675
R+ ++ + +SW+ K + F D HPQ +I++ L+EL E+ K GY F
Sbjct: 553 RDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLP 612
Query: 676 ---ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
E T ++ YHSE++A+AF L++ P PI+V K+ +C DCH+ +K I+ + R+
Sbjct: 613 CNLEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRD 672
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
IIVRD+ R H FV G C+C D+
Sbjct: 673 IIVRDNSRFHHFVKGGCSCGDY 694
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 223/479 (46%), Gaps = 59/479 (12%)
Query: 174 TNVTLGTALTACSSLESIRLGKQIHA-YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
T++ L L +C +RLG+ +HA V+ T + N L ++YS C + SA++
Sbjct: 16 TSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRL 75
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + N++SWTT++ +N L FS M G+ P +F L+S + + +
Sbjct: 76 FDAMPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAAR 135
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
GAQ+H +G++LG+ + L V +++ +Y K GL+ EA ++FD M + V W AMI G+
Sbjct: 136 HAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGY 195
Query: 353 AQMMDLAKDDLSAHNGGTEALSI-FSKLNSSGM-KPDLYTFSSILTICSRLVALEQGEQI 410
A+ NG EA I F + G+ D + S+L+ L I
Sbjct: 196 AK------------NGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAI 243
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWTSMITGFANHSL 469
H+ +K+GF +V V AL +MY K ++ A+RV ++ + ++S TS+I G+
Sbjct: 244 HSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDC 303
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL +F ++ GV PN+ TF + C+ ++ + ++ + K + D ++
Sbjct: 304 IEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGA---QLHAEVIKTSLISDSFV 360
Query: 530 --CLIDMFVRLGCIE----------------------------------EAFDFIKKMDF 553
L+DM+ + G I AFD +
Sbjct: 361 SSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGI 420
Query: 554 EPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
PN + + + C G ++ G FY+ + ++PK E Y+ ++D++ AGR ++
Sbjct: 421 RPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKG-EHYSCIIDMYGRAGRLDE 478
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + ++ S+++ C + L +HA ++KT D FV + L+++YGKCG +
Sbjct: 317 QGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISL 376
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+ ++F + ++W + I+ Q+ AI F M +G P ++T + LTACS
Sbjct: 377 SIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSH 436
Query: 188 LESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWT 245
+ G K ++ + E + + +Y G L+ A K + K N W
Sbjct: 437 AGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWC 496
Query: 246 TVIGACGENG 255
+++GAC G
Sbjct: 497 SLLGACRMRG 506
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/683 (34%), Positives = 363/683 (53%), Gaps = 19/683 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LL+ ++ S+ ++HA IVKT S F+ +L+N+Y K + E A+ V P
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVVSWTSLISG QN A+ F +M G P + T A A +SL GKQIH
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
A VK D VG S +Y + A K F+ I E+N+ +W I +G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F + PN T + + C L L +G Q+H L ++ G+ +++ V N ++
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
Y KC + ++ +F M N V+W +++A + Q + K A ++ +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEK-----------ASVLYLR 300
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ + SS+L+ C+ + LE G IHA +K + VG+ALV+MY KCG
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV--RPNQVTFVGAL 496
IE + + F EM + L++ S+I G+A+ AL LFE+M G PN +TFV L
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS AG V + F+ M+ Y I+P +HY C++DM R G +E A++FIKKM +P
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W CR HG +LG AAE L KL PKD ++ +L + F +AGRW + V+
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+ + + +SWI +K++V++F+ D H + EI L +L + + GYK
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLS 600
Query: 677 LTD----EESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D E++A V +HSEKLA+AFGLL+ P+ PI + K+ +C DCH+F K ++ R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EIIVRD+ R H+F +G C+C+D+
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDY 683
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 193/421 (45%), Gaps = 27/421 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
LG L S S+RLG+ +HA +VK + + N L ++YS SA
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+NV+SWT++I +NG L F +M EG+ PN+FT ++ G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H+L +K G ++ V S +Y K L D+A+KLFD + NL TWNA I+
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN---- 183
Query: 356 MDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S +G EA+ F + P+ TF + L CS + L G Q+H L
Sbjct: 184 --------SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
L++GF +DV V L++ Y KC +I + +F EM T+ +SW S++ + + +A
Sbjct: 236 LRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS 295
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----C 530
L+ V + L+AC AGM LG + +K ++ +
Sbjct: 296 VLYLRSRKDIVETSDFMISSVLSAC--AGMAGLELG---RSIHAHAVKACVERTIFVGSA 350
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
L+DM+ + GCIE++ +M E N V + I G G +++ E+ + P+
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEE---MAPRG 406
Query: 591 C 591
C
Sbjct: 407 C 407
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 21/321 (6%)
Query: 60 QEALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ E ++ + ++ + L C + L+ +H ++++G D V L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL----DMLEAGN 171
++ YGKC + ++ +F + N VSW SL++ YVQN + E A ++L D++E +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
+ + + L+AC+ + + LG+ IHA+ VK E VG++L +Y CG + + +
Sbjct: 311 F----MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI--QPNEFTLTSISSVCGTM 289
AF+ + EKN+++ ++IG G+ L F +M G PN T S+ S C
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 290 LSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNA 347
++ G ++ S+ G + I+ + + G+V+ A + M + W A
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 348 M-----IAGHAQMMDLAKDDL 363
+ + G Q+ LA ++L
Sbjct: 487 LQNACRMHGKPQLGLLAAENL 507
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/691 (33%), Positives = 372/691 (53%), Gaps = 85/691 (12%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S + LL CV KS+ A ++HA I+KT + F+ LV+VYGKCG +E+A+KV
Sbjct: 17 LDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKV 76
Query: 132 FDNL-------------------------------PRINVVSWTSLISGYVQNSQPELAI 160
FD++ P + SW +++SG+ Q + E A+
Sbjct: 77 FDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEAL 136
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+DM + G+AL+AC+ L + +G QIH + K + D +G++L +Y
Sbjct: 137 RFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMY 196
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
S C + SA +AF+ + +N++SW ++I +NG A + L F +M++ GI+P+E TL
Sbjct: 197 SKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLA 256
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFD---- 335
S++S C ++ ++R G Q+H+ +K Y ++L + N+++ +Y KC V+EA+ +FD
Sbjct: 257 SVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPL 316
Query: 336 ---------------------------GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
M N+V+WNA+IAG+ Q NG
Sbjct: 317 RDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQ------------NG 364
Query: 369 -GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL------S 421
EA+ +F L + P YTF ++L C+ L L+ G Q H LK GF S
Sbjct: 365 ENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDS 424
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D+ VG +L++MY KCG +E VF M R +SW +MI G+A + +AL++F +ML
Sbjct: 425 DIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREML 484
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
++G RP+ VT +G L+ACS+AG+V E YF+ M E+ + PV DHY C++D+ R GC+
Sbjct: 485 VSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCL 544
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA + I+ M EP+ V+W +A C+ HGN+ LG Y AE+LL++ P + Y +L +++
Sbjct: 545 DEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMY 604
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
GRW+DV V+ R+ + + SWI I+ ++ F D HP +I+ +L L
Sbjct: 605 AELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILT 664
Query: 662 EKAKCFGY-KQQESFELTDEESAS--VYHSE 689
E+ K GY + + E +EES S + HSE
Sbjct: 665 EQMKRVGYVPEADDDEPYEEESDSELILHSE 695
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/686 (33%), Positives = 370/686 (53%), Gaps = 19/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV++L C + +SL + IH I++ G D FV T L+N+Y KCG++ A F L
Sbjct: 108 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 167
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSWT++I+ VQ+ Q LA ++ M G P +TL T A + GK
Sbjct: 168 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGK 227
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
I++ V E D V NS +++ G L A + F + +++V++W VI +N
Sbjct: 228 FIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNE 287
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ +R F ++ +GI+ N+ T + +V ++ SL G +H L + GY ++ V
Sbjct: 288 NFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVAT 347
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
++M LY +C +A K+F M +++TW M +AQ NG EAL
Sbjct: 348 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQ------------NGFRKEALQ 395
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ G +P T ++L C+ L AL++G QIH+ ++ GF ++VV TAL+NMY
Sbjct: 396 LFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYG 455
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG++ A VF +M+ R ++ W SM+ +A H + LQLF M L G + + V+FV
Sbjct: 456 KCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVS 515
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD-F 553
L+A S++G V + YF M +++ I P + Y C++D+ R G I+EA D + K+
Sbjct: 516 VLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGC 575
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P+ ++W + CR H + AAEQ+L+ P +Y +L +++ +AG W+ V +
Sbjct: 576 LPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRM 635
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L R + + S I I ++V+ F D HP+ I+ LD L + + GY
Sbjct: 636 RKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDT 695
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
L D +E YHSE+LAIAFGL++TP +P+ V+K+ +C DCH K I+ L
Sbjct: 696 KMILHDVEDERKEDMLFYHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKL 755
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H F +G C+C+D+
Sbjct: 756 RGREILVRDTHRFHNFKDGRCSCKDY 781
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 279/502 (55%), Gaps = 15/502 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K T+ +V+LLQ C + K++ + +H H+ G Q+ V L+ +Y +CG++ EAQ+
Sbjct: 2 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 61
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF+ L R +V +WT +I Y Q + A+ +F M E PT VT L AC+S ES
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ G +IH +++ E D VG +L ++Y+ CGS+ A +F R+ ++V+SWT +I A
Sbjct: 122 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
C ++ + + +M +G+ PN+ TL ++ + G L G ++SL S+
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+RV NS M ++ GL+ +A++LF+ M ++VTWN +I + Q +
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG----------- 290
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA+ +F +L G+K + TF +L + + L +L +G+ IH L + G+ DVVV TAL+
Sbjct: 291 EAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALM 350
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y +C +A ++FV+M ++ +I+WT M +A + +ALQLF++M L G RP
Sbjct: 351 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 410
Query: 491 TFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
T V L C++ + + + +++ ++++ V++ LI+M+ + G + EA +
Sbjct: 411 TLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVE--TALINMYGKCGKMAEARSVFE 468
Query: 550 KMDFEPNEVIWSVFIAGCRRHG 571
KM + + ++W+ + +HG
Sbjct: 469 KMA-KRDILVWNSMLGAYAQHG 489
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 133/248 (53%), Gaps = 4/248 (1%)
Query: 54 VRSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++ F EA+ + +G K ++V +L + SL+ ++IH + + G +D
Sbjct: 284 VQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDV 343
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T L+++YG+C +A K+F ++ +V++WT + Y QN + A+ +F +M
Sbjct: 344 VVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE 403
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G PT+ TL L C+ L +++ G+QIH+++++ + V +L ++Y CG + A
Sbjct: 404 GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEA 463
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F ++ +++++ W +++GA ++G + L+ F++M +G + + + S+ S
Sbjct: 464 RSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHS 523
Query: 290 LSLRVGAQ 297
S+ G Q
Sbjct: 524 GSVTDGYQ 531
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 229/690 (33%), Positives = 378/690 (54%), Gaps = 19/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++ +L+ C L+ + +H H+V+ G D V+ L+ +Y KCG+++ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD +PR +++SW ++ISGY +N + +F M P +TL + ++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
RLG+ IHAYV+ D SV NSL +Y GS A K F+R+ K+++SWTT+I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
N + + + M + ++P+E T+ ++ S C T+ L G ++H L IK
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y KC +D+A +F + N+++W ++IAG L +N
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-----------LRLNNR 479
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL IF + ++P+ T ++ L C+R+ AL G++IHA L+TG D + A
Sbjct: 480 CFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY +CGR+ A F + + SW ++TG++ ++LF+ M+ + VRP+
Sbjct: 539 LLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++TF+ L CS + MV + L YF M+ +Y + P + HY C++D+ R G ++EA FI
Sbjct: 598 EITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFI 656
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+KM P+ +W + CR H ++LG +A+ + +L K Y +L +++ G+W
Sbjct: 657 QKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWR 716
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+VA V+ + +E L+ SW+ +K KV++F +D HPQ+ EI VL+ EK G
Sbjct: 717 EVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
Query: 669 YKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
+ DE S HSE+ AIAFGL+NT PI V K+ +MC +CH+ +K
Sbjct: 777 LTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVK 836
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
I+ REI VRD++ H F +G C+C D
Sbjct: 837 FISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 285/577 (49%), Gaps = 37/577 (6%)
Query: 59 FQEALSVLTEGPKVQTSS----YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EA+ +L +++ + +V+L++ C +++ +++ + + S +
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+ ++ + GN+ +A VF + N+ SW L+ GY + + A+ ++ ML G
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 175 NV-TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+V T L C + + GK++H +VV+Y E D V N+L ++Y CG + SA F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+R+ ++++SW +I ENG +GL F M + P+ TLTS+ S C + R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G +H+ I G+A ++ V NS+ +YL G EA+KLF M ++V+W MI+G+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ D +A+ + ++ +KPD T +++L+ C+ L L+ G ++H L
Sbjct: 375 --YNFLPD---------KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K +S V+V L+NMY KC I++A +F + + +ISWTS+I G ++ +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CL 531
L M + ++PN +T ALAAC+ G + + E+ + +D ++ L
Sbjct: 484 LIFLRQMKMT-LQPNAITLTAALAACARIGAL---MCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGC--RRHGNMELGFYAAEQLLKLKP 588
+DM+VR G + A+ + + + +V W++ + G R G+M + + +++P
Sbjct: 540 LDMYVRCGRMNTAW---SQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 589 KD---------CESYAMLLDIFVSAGRWEDVAVVKNL 616
+ C M+ + + ED V NL
Sbjct: 597 DEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL 633
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 160/325 (49%), Gaps = 27/325 (8%)
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G C NG+ + ++ + M + +E ++ +C + G++V+S+ + +
Sbjct: 68 GLCA-NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ + N+ + ++++ G + +A +F MS NL +WN ++ G+A+
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK-----------QGY 175
Query: 369 GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ ++ + L G+KPD+YTF +L C + L +G+++H ++ G+ D+ V
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+ MY KCG ++ A +F M R +ISW +MI+G+ + + H+ L+LF M V P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQK--EYKIKP--VMDHYMC--LIDMFVRLGCI 541
+ +T ++AC E LG + + Y I +D +C L M++ G
Sbjct: 296 DLMTLTSVISAC-------ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAG 566
EA +M+ + V W+ I+G
Sbjct: 349 REAEKLFSRME-RKDIVSWTTMISG 372
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 18/231 (7%)
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
L A+ EA+ + + + + D F +++ +C A E+G +++++ L +
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML- 481
V +G A + M+ + G + A VF +MS R L SW ++ G+A +A+ L+ ML
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+ GV+P+ TF L C G+ A G + +++ Y++ +D LI M+V+
Sbjct: 189 VGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELD--IDVVNALITMYVKC 244
Query: 539 GCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQL 583
G ++ A FD + + D + W+ I+G +G G F+A L
Sbjct: 245 GDVKSARLLFDRMPRRDI----ISWNAMISGYFENGMCHEGLELFFAMRGL 291
>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 236/717 (32%), Positives = 385/717 (53%), Gaps = 69/717 (9%)
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
N+E++HA ++K G L+N+Y K N+E+A K+F+ +P+ +V SWT LISG+
Sbjct: 306 NSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFA 363
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS-LESIRLGKQIHAYVVKYQTEDDT 210
+ + +F M + G P TL L +CSS + R+GK IH ++++ + D
Sbjct: 364 RIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDA 423
Query: 211 SVGNSLCSLYSTC-------------------------------GSLNSAIKAFNRIREK 239
+ NS+ Y C G + ++ F ++ K
Sbjct: 424 VLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGK 483
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS-LRVGAQV 298
+ SW T+I NG L KM++ G N+ T SI+ V + LS L +G Q+
Sbjct: 484 DAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTF-SIALVLASSLSVLGLGKQI 542
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH---------------VNLV 343
H+ +K+G + VRNS++ +Y KCG +++A +F + V V
Sbjct: 543 HTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESV 602
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
+W++M++G+ Q NG E AL FS + S ++ D +T +S+++ C+
Sbjct: 603 SWSSMVSGYVQ------------NGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAG 650
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
LE G Q+H K G DV +G+++++MY KCG + A +F + R ++ WTSMI+
Sbjct: 651 VLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMIS 710
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G A H +A++LFE M+ G+ PN+V+FVG L ACS+AG++ E YF +M++ Y I+
Sbjct: 711 GCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIR 770
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P +H+ C++D++ R G + E +FI +W F++ CR H N+E+G + ++
Sbjct: 771 PGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKK 830
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
LL+L+P D Y + I + RWE+ A +++L ++ + + SWI++K++V+SF
Sbjct: 831 LLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVM 890
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGL 697
D HPQ +I+ LDEL+ + K GY + + D E YHSEKLAIA+G+
Sbjct: 891 GDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGI 950
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++T +PI V+K+ +C DCHNFIK + L REII+RD R H F +GHC+C D+
Sbjct: 951 ISTAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADY 1007
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 15/228 (6%)
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
SS P L FSS S + E +HA +K G + + G L+N+Y K +E
Sbjct: 284 SSYFYPPLXYFSSTF---SDSMNYPNSEVLHAKLIKNGCVG--IRGNHLLNLYAKSQNLE 338
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
+A ++F E+ + SWT +I+GFA LS L LF M GV PNQ T L +CS
Sbjct: 339 QAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCS 398
Query: 501 ---NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
N + + + + +++ + V+++ ++D +V+ C A M E +
Sbjct: 399 SNVNDSRIGKGI-HGWILRNGLDLDAVLNN--SILDYYVKCRCFGYAEKLFGLMA-EKDT 454
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
V W++ ++ + G+M+ + + +L KD S+ ++D + G
Sbjct: 455 VSWNIMMSSYLQIGDMQ---KSVDLFRQLPGKDAASWNTMIDGLMRNG 499
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/513 (40%), Positives = 318/513 (61%), Gaps = 25/513 (4%)
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M+ +G++PN+FTL+++ C ++ SL G Q H+ IK+G+ S++ V+ +++++Y +CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK-----------DDLS--------AHN 367
+++A +FD MS + TWNAMI GHAQ D+ K D +S A N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 368 G-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G G E+L++F+++ +GMK D + S+L+ C+ L ALE G Q HA +++GF D+VVG
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+ALV+MY K G +E A +VF +M R +SW S+ITG A H + A+ LFE ML AG++
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+++FVG L+ACS+ G+V E GYF +M + Y I P + HY C+ID+ R GC++EA +
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI M EP+ +W + CR HGN EL AE LL ++ + Y +L +I+ +AG+
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W+D A V+ L ++ + + +SWI +K +++F + HPQ EI + L+ L K K
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420
Query: 667 FGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY ++F L D +E + +HSEKLAIAFG++NT + I V K+ +C DCH
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK I+ R+I+VRD+ R H F +G C+C D+
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDY 513
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 184/389 (47%), Gaps = 52/389 (13%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M+ G P TL T + AC+S+ S+ GKQ H Y++K E D V +L +Y+ CGS
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 226 LNSA-------------------------------IKAFNRIREKNVMSWTTVIGACGEN 254
L A +K F + E++V+SWT VI +N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + L F++M G++ + F + S+ S C + +L +G Q H+ ++ G+A ++ V
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
++++ +Y K G +++A ++FD M N V+WN++I G AQ H G +A+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQ-----------HGRGNDAVL 229
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ +G+KP+ +F +L+ CS + +G + +T G + DV T ++++
Sbjct: 230 LFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLL 289
Query: 434 KKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
+ G ++ A M +S W +++ H + A ++ E +L +V
Sbjct: 290 GRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLL-----GMEVQI 344
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKI 521
G SN +Y A G ++ K K+
Sbjct: 345 AGIYVLLSN---IYAAAGQWDDAAKVRKL 370
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 158/319 (49%), Gaps = 33/319 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ +G K + ++++ C + SL + H +I+K G D V T LV++Y +CG+
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 125 MEEAQKVFDNLPRI-------------------------------NVVSWTSLISGYVQN 153
+E+A VFD + +VVSWT++I+GY QN
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+ +++VF M + G +G+ L+AC+ L ++ LG+Q HAYVV+ D VG
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
++L +Y+ GS+ A + F+++ ++N +SW ++I C ++G + F +ML GI+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQK 332
PNE + + S C + G +L + G ++ ++ L + G +DEA+
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 333 LFDGMS-HVNLVTWNAMIA 350
+GM ++ W A++
Sbjct: 301 FINGMPVEPDVSVWGALLG 319
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 2/197 (1%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + +L HA++V++G D V + LV++Y K G+ME+A +VFD +P+
Sbjct: 147 SVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMPQR 206
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
N VSW S+I+G Q+ + A+ +F ML+AG P ++ L+ACS + G+
Sbjct: 207 NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYF 266
Query: 199 AYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGE 256
+ + Y D S + L G L+ A N + E +V W ++GAC +G
Sbjct: 267 NLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIHGN 326
Query: 257 AVQGLRFFSKMLSEGIQ 273
R +L +Q
Sbjct: 327 TELAKRIAEHLLGMEVQ 343
>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
chloroplastic-like [Glycine max]
Length = 753
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/690 (31%), Positives = 383/690 (55%), Gaps = 16/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + SY L + C +LS+ ++ H + + ++ + F+ ++ +Y C + A
Sbjct: 75 GISINPRSYEYLFKMCGTLGALSDGKLFHNRLQRM-ANSNKFIDNCILQMYCDCKSFTAA 133
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++ FD + ++ SW ++IS Y + + + A+ +FL ML+ G P T + + +
Sbjct: 134 ERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADP 193
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ LGKQIH+ +++ + D S+ + ++Y CG L+ A A N++ K+ ++ T ++
Sbjct: 194 SMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLM 253
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ L FSKM+SEG++ + F + I C + L G Q+HS IKLG
Sbjct: 254 VGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLE 313
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V ++ Y+KC + A++ F+ + N +W+A+IAG+ Q +
Sbjct: 314 SEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDR-------- 365
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
AL +F + S G+ + + +++I CS + L G QIHA +K G ++ + +A
Sbjct: 366 ---ALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESA 422
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
++ MY KCG+++ A + F+ + ++WT++I A H + +AL+LF++M +GVRPN
Sbjct: 423 MITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPN 482
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+G L ACS++G+V E + + M +Y + P +DHY C+ID++ R G + EA + I
Sbjct: 483 VVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVI 542
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M FEP+ + W + GC N+E+G AA+ + +L P D +Y ++ +++ AG+W+
Sbjct: 543 RSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWD 602
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL---VEKAK 665
+ A + + E L + SWI +K KV+ F D HPQ+ +I+ L EL +K +
Sbjct: 603 EAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGE 662
Query: 666 CFGYKQQESF-ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
++ + + T+ + + HSE+LAIA+GL+ T +PI+V K+T C+DCH F K
Sbjct: 663 ERLLNEENALCDFTERKDQLLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKR 722
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ +T RE++VRD R H +G C+CRD+
Sbjct: 723 VSVVTGRELVVRDGNRFHHINSGECSCRDY 752
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++EG ++ + +L+ C L + IH++ +K G + V T LV+ Y KC
Sbjct: 272 MISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVDFYVKCAR 331
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
E A++ F+++ N SW++LI+GY Q+ + + A+ VF + G + A
Sbjct: 332 FEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQA 391
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS++ + G QIHA +K S +++ ++YS CG ++ A +AF I + + ++W
Sbjct: 392 CSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAW 451
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGI 303
T +I A +G+A + LR F +M G++PN T + + C ++ G Q + S+
Sbjct: 452 TAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTD 511
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
K G + N ++ +Y + GL+ EA ++ M ++++W +++ G
Sbjct: 512 KYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 233/707 (32%), Positives = 384/707 (54%), Gaps = 21/707 (2%)
Query: 58 GF-QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF +EAL + L G + ++ +L+ C L+ +HAH+++ G + V+
Sbjct: 174 GFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVL 233
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
LV +Y KCG++E A+KVFD + + +SW ++I+G+ +N + E + +FL MLE
Sbjct: 234 NALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVE 293
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P +T+ + A L + K+IHA VK D + NSL +YS+ G + A
Sbjct: 294 PNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTV 353
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+R+ ++ MSWT +I +NG + L ++ M + P++ T+ S + C ++ L
Sbjct: 354 FSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRL 413
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
VG ++H L G+ + V N+++ +Y K ++++A ++F M ++++W++MIAG
Sbjct: 414 DVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAG- 472
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
++ EAL F + + +KP+ TF + L C+ +L G++IHA
Sbjct: 473 ----------FCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHA 521
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L+ G S+ V AL+++Y KCG+ A F T+ ++SW M+ GF H
Sbjct: 522 HVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDI 581
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
AL F +ML G P++VTFV L CS AGMV + F M ++Y I P + HY C++
Sbjct: 582 ALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMV 641
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
D+ R+G + E ++FI +M P+ +W + GCR H N+ELG AA+ +L+L+P D
Sbjct: 642 DLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAG 701
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
+ +L D++ AG W +V+ V+ R + L SW+ +K +++F +D HPQ E
Sbjct: 702 YHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKE 761
Query: 653 IFKVLDELVEKAKCFGYKQQESFELTDEESAS----VYHSEKLAIAFGLLNTPIVSPILV 708
I VLD + E+ K G+ ES+ L D+E + HSE+LA+AFGL+NT + I V
Sbjct: 762 INDVLDGIYERMKASGFAPVESYSLEDKEVSKDDVLCGHSERLAVAFGLINTTPGTSICV 821
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
K+ C CH +++I+ + REI VRD+K H F +G C+C G
Sbjct: 822 TKNQYTCESCHGILRMISKIVRREITVRDTKEFHHFRDGSCSCGGSG 868
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 284/594 (47%), Gaps = 68/594 (11%)
Query: 59 FQEALSVLTEGPKV-QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF--- 114
Q+AL +L P+ +YV+L C R++ H ++ H D TF
Sbjct: 78 LQQALWLLESSPEPPDEDAYVALFHLCEWRRAAE-------HGLRACGHADAAHGTFGLR 130
Query: 115 ----LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
++++ + G A KVF +P +V SW ++ GY + E A+ ++ ML AG
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P T L +C + + +G+++HA+V+++ + V N+L ++Y+ CG + +A
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
K F+ + + +SW +I EN E GL F ML + ++PN T+TS++ G +
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLS 310
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L ++H+L +K G+A+++ NS++ +Y G + EA +F M + ++W AMI+
Sbjct: 311 DLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMIS 370
Query: 351 GHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G+ + NG +AL +++ + + + PD T +S L C+ L L+ G +
Sbjct: 371 GYEK------------NGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIK 418
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H L GF+ +VV ALV MY K IE+A VF M + +ISW+SMI GF +
Sbjct: 419 LHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHK 478
Query: 470 SHQALQLFEDMLLAGVRPNQVTFV---------GAL------------AACSNAGMVYEA 508
+ +AL F M LA V+PN VTF+ G+L ++ G V A
Sbjct: 479 NFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNA 537
Query: 509 L----------GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM---DFEP 555
L GY + K V+ + ++ FV G + A F +M P
Sbjct: 538 LLDLYVKCGQTGYAWAQFGAHGTKDVVS-WNIMLAGFVAHGHGDIALSFFNEMLETGEHP 596
Query: 556 NEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
+EV + + GC R G + G F++ + + P + + YA ++D+ GR
Sbjct: 597 DEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVP-NLKHYACMVDLLSRVGR 649
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/683 (33%), Positives = 377/683 (55%), Gaps = 19/683 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD--NLPR 137
LL + +SL +A IH I+ F+ L+N+Y KCG + +A +F +
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+V+WTSLI+ + A+ +F M +G YP T + L+A ++ + G+Q+
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H+ + K+ + + VG +L +Y+ C ++SA++ F+++ E+N++SW ++I N
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLY 327
Query: 258 VQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ + F +L E + PNE +++S+ S C M L G QVH + +K G V NS
Sbjct: 328 DRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNS 387
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+M +Y KC DE KLF + ++VTWN ++ G Q D EA + F
Sbjct: 388 LMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ-----NDKFE------EACNYF 436
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+ G+ PD +FS++L + L AL QG IH +K G++ ++ + +L+ MY KC
Sbjct: 437 WVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKC 496
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + A +VF + +ISWT+MI+ + H ++Q ++LFE ML G+ P+ VTFV L
Sbjct: 497 GSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVL 556
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS+ G V E L +F M+K + + P +HY C++D+ R G ++EA FI+ M +P
Sbjct: 557 SACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPT 616
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + CR++GN+++G AAE+L +++P + +Y +L ++ +GR E+ V+ L
Sbjct: 617 PSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRL 676
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF- 675
+ + SWI +K+ + F +D H S EI+K+L++L + K GY + F
Sbjct: 677 MGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFV 736
Query: 676 ----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
E +EE YHSEKLA+AFGLL PI SPI + K+ C CH +K+ + + R
Sbjct: 737 TNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDR 796
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EIIVRD R H+F +G C+C D+
Sbjct: 797 EIIVRDINRFHRFADGFCSCGDY 819
>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Cucumis sativus]
Length = 697
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/686 (33%), Positives = 382/686 (55%), Gaps = 21/686 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFV--MTFLVNVYGKCGNMEEAQKVFDN 134
+ LL+ + K+L IHAH+ T +++D V + L+N+Y KC + A+K+FD+
Sbjct: 23 IKLLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDS 82
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRL 193
+PR NVVSW++L++GY+QN P +F M+ N +P + TA+++C S +
Sbjct: 83 MPRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE- 141
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GKQ H Y +K E V N+L LYS C + +AI+ + ++ + V+ +
Sbjct: 142 GKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ + + ++SEGI+ N T +I +C ++ + +G QVH+ +K ++ +
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+SI+ +Y KCG V + FD + N+V+W ++IA + Q + EAL
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQ-----------NEFFEEAL 310
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++FSK+ + P+ YT + + + L AL G+Q+HA K+G +V+VG AL+ MY
Sbjct: 311 NLFSKMEIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMY 370
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
K G I A VF M+ +I+W ++ITG ++H L +AL +F+DM+ G RPN VTF+
Sbjct: 371 FKSGDILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFI 430
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G + AC++ +V E YF + K+++I P ++HY C++ + R G ++EA +F++
Sbjct: 431 GVILACAHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQI 490
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ V W + C H + + G AE LL+L+P+D +Y +L ++ RW+ V +
Sbjct: 491 NWDVVSWRTLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEI 550
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L RE + + SW+ I++ + F D HP++ I++ + +L+ K + GY
Sbjct: 551 RKLMRERNVKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDI 610
Query: 674 SFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
L D E+ V YHSEKLA+A+GL+ TP +PI V+K+ MC DCH IK+I+ +
Sbjct: 611 DNVLHDIEDEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKV 670
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
R I+VRD+ R H F NG C+C D+
Sbjct: 671 ANRVIVVRDANRFHHFQNGCCSCGDY 696
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++EG + ++YV++ + C + K ++ + +HA ++K+ D ++ + ++++YGKCGN
Sbjct: 215 IISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYIGSSIIDMYGKCGN 274
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ + FD L NVVSWTS+I+ Y QN E A+++F M P T+ +
Sbjct: 275 VLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCIPPNEYTMAVLFNS 334
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ L ++ LG Q+HA K + + VGN+L +Y G + +A F+ + N+++W
Sbjct: 335 AAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNIITW 394
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGI 303
+I +G + L F M++ G +PN T + C + + G + L
Sbjct: 395 NAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHLMK 454
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
+ L I+ L + G +DEA+ + ++V+W ++
Sbjct: 455 QFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/635 (35%), Positives = 364/635 (57%), Gaps = 27/635 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + NV SW S+I+ ++ A+ F M + P T A+ +CS+L + G
Sbjct: 112 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 171
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q H + + E D V ++L +YS CG L A F+ I +N++SWT++I +N
Sbjct: 172 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 231
Query: 255 GEAVQGLRFFSKML-----SEG---IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+A + L F + L SEG + + + S+ S C + + VH IK G
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ +L V N++M Y KCG + ++++FDGM+ ++++WN++IA +AQ
Sbjct: 292 FEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQ------------ 339
Query: 367 NG-GTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG TE++ IF ++ G + + T S++L C+ + G+ IH +K G S+V
Sbjct: 340 NGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVF 399
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VGT++++MY KCG++E A + F M + + SW++M+ G+ H + +AL++F +M +AG
Sbjct: 400 VGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAG 459
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+PN +TFV LAACS+AG++ E +F+ M E+ ++P ++HY C++D+ R G ++EA
Sbjct: 460 VKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEA 519
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
FD IK M P+ V+W + CR H N++LG +A +L +L PK+C Y +L +I+ A
Sbjct: 520 FDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADA 579
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GRWEDV ++ L + L + +S + IK +V+ F D HPQ +I++ L++L K
Sbjct: 580 GRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKL 639
Query: 665 KCFGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
+ GY + L D EE V HSEKLA+AFG++NT + I ++K+ +C DCH
Sbjct: 640 QEVGYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCH 699
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK I+ + REI+VRDSKR H F +G C+C D+
Sbjct: 700 TAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDY 734
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 227/449 (50%), Gaps = 27/449 (6%)
Query: 30 DKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKS 89
DK + S+ ++L + + E +R+ LS+ K S++ ++ C
Sbjct: 113 DKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSL-----KPNRSTFPCAIKSCSALLD 167
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + H + G D FV + LV++Y KCG + +A+ +FD + N+VSWTS+I+G
Sbjct: 168 LHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITG 227
Query: 150 YVQNSQPELAIHVFLDML--EAGNYPTN------VTLGTALTACSSLESIRLGKQIHAYV 201
YVQN A+ +F + L E+G+ + + + L+ACS + + + +H ++
Sbjct: 228 YVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFL 287
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
+K E D V N+L Y+ CG L + + F+ + E++V+SW ++I +NG + + +
Sbjct: 288 IKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347
Query: 262 RFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
F +M+ +G I N TL+++ C S R+G +H IK+G SN+ V SI+ +
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDM 407
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG V+ A+K FD M N+ +W+AM+AG+ H EAL +F ++N
Sbjct: 408 YCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM-----------HGHAKEALEVFYEMN 456
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+G+KP+ TF S+L CS LE+G A++ + V +V++ + G +
Sbjct: 457 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 516
Query: 440 ERASRVFVEMSTRT-LISWTSMITGFANH 467
+ A + M R + W +++ H
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/357 (31%), Positives = 184/357 (51%), Gaps = 37/357 (10%)
Query: 233 FNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FN+ +K NV SW +VI +G++V+ LR FS M ++PN T C +L
Sbjct: 108 FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD 167
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G Q H + G+ +L V ++++ +Y KCG + +A+ LFD +SH N+V+W +MI G
Sbjct: 168 LHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITG 227
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSK--LNSSGMKP------DLYTFSSILTICSRLVA 403
+ Q DD AH AL +F + + SG + D S+L+ CSR+
Sbjct: 228 YVQ-----NDD--AH----RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSE 276
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
E +H +K GF D+ V L++ Y KCG + + RVF M+ R +ISW S+I
Sbjct: 277 KSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAV 336
Query: 464 FANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A + +S +++++F M+ G + N VT L AC+++G + LG + IK
Sbjct: 337 YAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGS--QRLG---KCIHDQVIK 391
Query: 523 PVMDHYM----CLIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++ + +IDM+ + G +E +AFD ++ E N WS +AG HG+
Sbjct: 392 MGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR----EKNVKSWSAMVAGYGMHGH 444
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/707 (32%), Positives = 375/707 (53%), Gaps = 33/707 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV--YGKCGNMEEAQKVFDNL 135
+SL+ +C K L IHA +++TG D F + L+ +++ AQ+VFD +
Sbjct: 39 LSLIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQI 95
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLG 194
P N+ +W +LI Y +S P ++ +FL ML ++ ++P T + A S LE + G
Sbjct: 96 PHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTG 155
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K H V+K D + NSL Y+ CG L + F I ++V+SW ++I A +
Sbjct: 156 KAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQG 215
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + L F +M ++ ++PN T+ + S C G VHS + +L +
Sbjct: 216 GCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLS 275
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD----------LAKDDLS 364
N+++ +Y KCG V++A++LFD M ++V+W M+ G+A++ + + D++
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIA 335
Query: 365 AHNG----------GTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
A N EAL +F +L S KPD T S L+ C++L A++ G IH
Sbjct: 336 AWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY 395
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
K G + + T+L++MY KCG +++A VF + + + W++MI G A H A
Sbjct: 396 IKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDA 455
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
+ LF M V+PN VTF L ACS+ G+V E +F M+ Y + P + HY C++D
Sbjct: 456 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 515
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +EEA + I+KM P +W + C H N+ L A QL++L+P + +
Sbjct: 516 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGA 575
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +L +I+ AG+W+ V+ ++ L R+ L + S I + V+ F D HP + +I
Sbjct: 576 YVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKI 635
Query: 654 FKVLDELVEKAKCFGYKQQES--FELTDEES----ASVYHSEKLAIAFGLLNTPIVSPIL 707
+ LDE+V + + GY +S +L +EE A HSEKLAIAFGL++T PI
Sbjct: 636 YAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQSQPIR 695
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+VK+ +C DCH+ K+++ L REI++RD R H F GHC+C D+
Sbjct: 696 IVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDY 742
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 151/330 (45%), Gaps = 38/330 (11%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + T+ K + V +L C + +H++I + + + +
Sbjct: 219 EEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAM 278
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTS------------------------------ 145
+++Y KCG++E+A+++FD +P ++VSWT+
Sbjct: 279 LDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWN 338
Query: 146 -LISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
LIS Y Q +P+ A+ +F ++ L P VTL + L+AC+ L ++ LG IH Y+ K
Sbjct: 339 ALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKK 398
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ + + SL +Y CG L A+ F+ + K+V W+ +I +G +
Sbjct: 399 QGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIAL 458
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYL 322
FSKM + ++PN T T+I C + + G + + + G ++ ++ +
Sbjct: 459 FSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILG 518
Query: 323 KCGLVDEAQKLFDGMSHVNLVT-WNAMIAG 351
+ GL++EA +L + M + W A++
Sbjct: 519 RAGLLEEAVELIEKMPMAPAASVWGALLGA 548
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 2/188 (1%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L++ K + VS L C ++ IH +I K G + + T L+++Y KCG++
Sbjct: 362 LSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDL 421
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
++A VF ++ R +V W+++I+G + + AI +F M E P VT L AC
Sbjct: 422 QKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCAC 481
Query: 186 SSLESIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS- 243
S + + G+ + + Y + + G L A++ ++ S
Sbjct: 482 SHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASV 541
Query: 244 WTTVIGAC 251
W ++GAC
Sbjct: 542 WGALLGAC 549
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/700 (33%), Positives = 394/700 (56%), Gaps = 30/700 (4%)
Query: 71 KVQTSSYVSLLQECVNRKSLS----NAEIIHAHIVKTGSHQDFFVM--TFLVNVYGKCGN 124
++ SSY LL +L + +HA++++ D +++ LVN+Y KC
Sbjct: 347 EINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNAL-VDVWILIGNALVNLYAKCNA 405
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+ +F +P + VSW S+ISG N + E A+ F M G P+ ++ + L++
Sbjct: 406 IDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSS 465
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SL I LG+QIH +K + D SV N+L +LY+ + K F + E + +SW
Sbjct: 466 CASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSW 525
Query: 245 TTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ IGA + +V Q +++F +M+ G +PN T +I S ++ L +G Q+H+L +
Sbjct: 526 NSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALIL 585
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
K A + + N+++ Y KC +++ + +F MS + V+WNAMI+G+
Sbjct: 586 KHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYI--------- 636
Query: 363 LSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
HNG +A+ + + G + D +T +++L+ C+ + LE+G ++HA ++ +
Sbjct: 637 ---HNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEA 693
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+VVVG+ALV+MY KCG+I+ ASR F M R + SW SMI+G+A H +AL+LF M
Sbjct: 694 EVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMK 753
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G P+ VTFVG L+ACS+ G+V E +F+ M + Y++ P ++H+ C++D+ R G +
Sbjct: 754 QHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDV 813
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLLD 599
++ +FIK M PN +IW + C R N ELG AA+ L++L+P + +Y +L +
Sbjct: 814 KKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSN 873
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
+ + G+WEDV + R ++ + SW+ +KD V+ F D HP+ +I+ L E
Sbjct: 874 MHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKE 933
Query: 660 LVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
++ K + GY + + L D E + YHSEKLAIAF L + PI ++K+ +
Sbjct: 934 IMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSEL-PIRIIKNLRV 992
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH K I+++ R+II+RDS R H F G C+C+D+
Sbjct: 993 CGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDY 1032
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 258/502 (51%), Gaps = 48/502 (9%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
++ +A +H I KTG D F LVN++ + GN+ AQK+FD +P+ N+VSW+ L+S
Sbjct: 54 TVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVS 113
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL--ESIRLGKQIHAYVVKYQT 206
GY QN P+ A +F ++ AG P + +G+AL AC L ++LG +IH + K
Sbjct: 114 GYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY 173
Query: 207 EDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D + N L S+YS C S++ A + F I+ K SW ++I G+A+ + FS
Sbjct: 174 ASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFS 233
Query: 266 KMLSEGIQ----PNEFTLTSISSV------CGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
M E + PNE+T S+ +V CG L ++ A++ K + +L V +
Sbjct: 234 SMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIE----KSSFVKDLYVGS 289
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ + + GL+D A+ +F+ M N VT N ++ G L+ + G EA I
Sbjct: 290 ALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVG-----------LARQHQGEEAAKI 338
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQ----GEQIHALTLKTGFLSD-VVVGTALV 430
F ++ ++ + +++ +L+ + L++ G+++HA ++ + +++G ALV
Sbjct: 339 FKEMKDL-VEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALV 397
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
N+Y KC I+ A +F M ++ +SW S+I+G ++ +A+ F M G+ P++
Sbjct: 398 NLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKF 457
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEY--KIKPVMDHYM----CLIDMFVRLGCIEEA 544
+ + L++C+ +LG+ + Q+ + IK +D + L+ ++ C+EE
Sbjct: 458 SVISTLSSCA-------SLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEY 510
Query: 545 FDFIKKMDFEPNEVIWSVFIAG 566
M E ++V W+ FI
Sbjct: 511 QKVFFLMP-EYDQVSWNSFIGA 531
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 116/225 (51%), Gaps = 1/225 (0%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ G K +++++L + L IHA I+K D + L+ YGKC
Sbjct: 547 LEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKC 606
Query: 123 GNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
ME+ + +F + R + VSW ++ISGY+ N A+ + M++ G + TL T
Sbjct: 607 EQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATV 666
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+S+ ++ G ++HA ++ E + VG++L +Y+ CG ++ A + F + +N+
Sbjct: 667 LSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNI 726
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
SW ++I +G + L+ F++M G P+ T + S C
Sbjct: 727 YSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSAC 771
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ +G ++ + ++L C + +L +HA ++ + V + LV++Y KCG
Sbjct: 651 MMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGK 710
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A + F+ +P N+ SW S+ISGY ++ A+ +F M + G P +VT L+A
Sbjct: 711 IDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSA 770
Query: 185 CSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS---LNSAIKAFNRIREKN 240
CS + + G + + Y+ + + L G L IK N
Sbjct: 771 CSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMP--MNPN 828
Query: 241 VMSWTTVIGACGE-NGEAVQGLRFFSKMLSEGIQP 274
+ W T++GAC N + R +KML E ++P
Sbjct: 829 ALIWRTILGACCRANSRNTELGRRAAKMLIE-LEP 862
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/693 (32%), Positives = 387/693 (55%), Gaps = 21/693 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEE 127
GP + + VS L C + IHA ++K+ +H + +V L+ +Y +CG M +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++ + +VV+W SLI GYVQN + A+ F DM+ AG+ V++ + + A
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L ++ G ++HAYV+K+ + + VGN+L +YS C +AF R+ +K+++SWTTV
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +N V+ L F + + ++ +E L SI + S+ + ++H ++ G
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ ++N ++ +Y KC + A ++F+ + ++V+W +MI+ SA N
Sbjct: 519 LDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS------------SALN 565
Query: 368 GG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +EA+ +F ++ +G+ D IL+ + L AL +G +IH L+ GF + +
Sbjct: 566 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 625
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
A+V+MY CG ++ A VF + + L+ +TSMI + H A++LF+ M V
Sbjct: 626 VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ ++F+ L ACS+AG++ E G+ ++M+ EY+++P +HY+CL+DM R C+ EAF+
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
F+K M EP +W +A CR H E+G AA++LL+L+PK+ + ++ ++F GR
Sbjct: 746 FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 805
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK-AK 665
W DV V+ + + + SWI + KV+ F D HP+S EI++ L E+ K +
Sbjct: 806 WNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Query: 666 CFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY F L + +E V HSE++AIA+GLL TP + + + K+ +CRDCH
Sbjct: 866 EVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHT 925
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
F K+++ L R+I++RD+ R H F +G C+C D
Sbjct: 926 FCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 251/472 (53%), Gaps = 26/472 (5%)
Query: 12 CTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPK 71
C++ T +PS + N V Q KL +G V + FQ L V
Sbjct: 30 CSIPT---EPSCRRNPFRQSNQPV--QVPSPKLACFDG----VLTEAFQR-LDVSENNSP 79
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQK 130
V+ +YV L+ C R+++S +H+ I KT S + F+ LV +YGKCG++++A+K
Sbjct: 80 VEAFAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEK 137
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P +W ++I YV N +P A+ ++ +M G + L AC+ L
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 197
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIG 249
IR G ++H+ +VK + N+L S+Y+ L++A + F+ +EK + + W +++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YA 308
+ +G++++ L F +M G PN +T+ S + C ++G ++H+ +K ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S L V N+++ +Y +CG + +A+++ M++ ++VTWN++I G+ Q +
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY---------- 367
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL FS + ++G K D + +SI+ RL L G ++HA +K G+ S++ VG
Sbjct: 368 -KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
L++MY KC R F+ M + LISWT++I G+A + +AL+LF D+
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 206/413 (49%), Gaps = 32/413 (7%)
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYST 222
LD+ E N P L C ++ G+Q+H+ + K + + + + L +Y
Sbjct: 71 LDVSE-NNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGK 128
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGSL+ A K F+ + ++ +W T+IGA NGE L + M EG+ + ++
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-N 341
C + +R G+++HSL +KLGY S + N+++ +Y K + A++LFDG +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V WN++++ + S E L +F +++ +G P+ YT S LT C
Sbjct: 249 AVLWNSILSSY-----------STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 402 VALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ G++IHA LK+ S++ V AL+ MY +CG++ +A R+ +M+ +++W S+
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I G+ + + +AL+ F DM+ AG + ++V+ +AA +G + L E+ Y
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA---SGRLSNLLAGMEL--HAYV 412
Query: 521 IKPVMDHYM----CLIDMFVR--LGC-IEEAFDFIKKMDFEPNEVIWSVFIAG 566
IK D + LIDM+ + L C + AF + D + W+ IAG
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL----ISWTTVIAG 461
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 177/358 (49%), Gaps = 16/358 (4%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++L ++EAL ++ G K S S++ +L +HA+++K G +
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V L+++Y KC + F + +++SWT++I+GY QN A+ +F D+ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
+ LG+ L A S L+S+ + K+IH ++++ + DT + N L +Y C ++ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQNELVDVYGKCRNMGYA 540
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F I+ K+V+SWT++I + NG + + F +M+ G+ + L I S ++
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+L G ++H ++ G+ + +++ +Y CG + A+ +FD + L+ + +MI
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+ H G A+ +F K+ + PD +F ++L CS L++G
Sbjct: 661 NAYGM-----------HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/705 (33%), Positives = 382/705 (54%), Gaps = 20/705 (2%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EAL + EG +V ++L+ V + A IHA K G ++ FV T
Sbjct: 129 FEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTA 188
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++ Y CG + A+ VFD + + V+WT+++S Y +N PE A++ F M G P
Sbjct: 189 LIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPN 248
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L +AL A L S LGK IH VK + + VG +L +Y+ CG + A F
Sbjct: 249 PFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFE 308
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
I +V+ W+ +I ++ + Q F +M+ + PNEF+L+ + C + L +
Sbjct: 309 MIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLEL 368
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+L IKLGY S L V N++M +Y KC ++ + ++F + N V+WN +I G+ Q
Sbjct: 369 GEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQ 428
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
A+D ALS+F ++ ++ M TFSS+L C+ +++ QIH+L
Sbjct: 429 S-GFAED----------ALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLI 477
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K+ F +D +V +L++ Y KCG I A +VF + ++SW S+I+ +A H + AL
Sbjct: 478 EKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNAL 537
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LF+ M + ++ N VTFV L+ C + G+V + L F M +++IKP M+HY C++ +
Sbjct: 538 ELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVRL 597
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G + +A FI + P+ ++W ++ C H N+ LG YAAE++L ++P D +Y
Sbjct: 598 LGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETTY 657
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ +AG ++VA+ + R + + SW+ IK +V++F HP I
Sbjct: 658 VLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGSADHPDMRIIN 717
Query: 655 KVLDELVEKAKCFGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVV 709
+L+ L KA GY + L D EE A + HSE+LA+A+GL TP PI ++
Sbjct: 718 AMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRIM 777
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ C DCH K+I+ + REIIVRD R H F G C+C D+
Sbjct: 778 KNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDY 822
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 166/611 (27%), Positives = 284/611 (46%), Gaps = 64/611 (10%)
Query: 46 QLNGNSEPVRSLGFQEALSVLTEG------PKVQTSSYVSLLQECVNRKSLSNAEIIHAH 99
Q+NG R+L EAL L + PK+ + + LQ C+ R +HA
Sbjct: 13 QINGLLS--RNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHAR 70
Query: 100 IVKTG--SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE 157
+V+ G + D F L+N Y K G + A+++FD +P N VS+ +L+ GY + E
Sbjct: 71 VVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFE 130
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
A+ +F + G+ + L T L ++++ L IHA K + + VG +L
Sbjct: 131 EALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALI 190
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
YS CG++ A F+ I K+ ++WT ++ EN L FSKM G +PN F
Sbjct: 191 DAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPF 250
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
LTS + S +G +H +K Y + V +++ +Y KCG +++A +F+ +
Sbjct: 251 VLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMI 310
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
H +++ W+ +I+ +AQ S N +A +F ++ S + P+ ++ S +L
Sbjct: 311 PHDDVILWSFLISRYAQ---------SCQN--EQAFEMFLRMMRSFVVPNEFSLSGVLQA 359
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ + LE GEQIH L +K G+ S++ VG AL++MY KC +E + +F + +SW
Sbjct: 360 CANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSW 419
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
++I G+ + AL +F +M A + QVTF L AC+N + A+ +++K
Sbjct: 420 NTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEK 479
Query: 518 EYKIKPVMDHYMC--LIDMFVRLGCIEEA------------------------------- 544
D +C LID + + G I +A
Sbjct: 480 STFNN---DTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNA 536
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL---KLKPKDCESYAMLL 598
FD + K D + N+V + ++ C G + G + ++ ++KP E Y ++
Sbjct: 537 LELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPS-MEHYTCIV 595
Query: 599 DIFVSAGRWED 609
+ AGR D
Sbjct: 596 RLLGRAGRLTD 606
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/701 (35%), Positives = 391/701 (55%), Gaps = 30/701 (4%)
Query: 72 VQTSSYVSLLQE-----CVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVNVYGKCGN 124
V SYV LL L +H H++ TG DF V LVN+Y KCG+
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGS 364
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A++VF + + VSW S+I+G QN A+ + M P + TL ++L++
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SL+ +LG+QIH +K + + SV N+L +LY+ G LN K F+ + E + +SW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 245 TTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
++IGA + ++ + + F G + N T +S+ S ++ +G Q+H L +
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
K A N+++ Y KCG +D +K+F M+ + VTWN+MI+G+ LAK
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK-- 602
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
AL + + +G + D + ++++L+ + + LE+G ++HA +++ SD
Sbjct: 603 ---------ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
VVVG+ALV+MY KCGR++ A R F M R SW SMI+G+A H +AL+LFE M L
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 483 AG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G P+ VTFVG L+ACS+AG++ E +FE M Y + P ++H+ C+ D+ R G +
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 542 EEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLD 599
++ DFI+KM +PN +IW +V A CR +G ELG AAE L +L+P++ +Y +L +
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ + GRWED+ + ++ + + +SW+ +KD V+ F D HP + I+K L E
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL-LNTPIVSPILVVKSTT 713
L K + GY Q F L D +E YHSEKLA+AF L PI ++K+
Sbjct: 894 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 953
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ K I+ + R+II+RDS R H F +G C+C DF
Sbjct: 954 VCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDF 994
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 23/434 (5%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+S +Q CV + A H+ + K +D ++ L+N Y + G+ A+KVFD +P
Sbjct: 7 LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGK 195
N VSW ++SGY +N + + A+ DM++ G + + L AC + S I G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
QIH + K D V N L S+Y C GS+ A+ AF I KN +SW ++I +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTS-ISSVCG-TMLSLRVGAQVHSLGIKLGYASNLR 312
G+ R FS M +G +P E+T S +++ C T +R+ Q+ K G ++L
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V + ++ + K G + A+K+F+ M N VT N ++ G L G EA
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG-----------LVRQKWGEEA 293
Query: 373 LSIFSKLNSS-GMKPDLYT--FSSILTIC-SRLVALEQGEQIHALTLKTGFLSDVV-VGT 427
+F +NS + P+ Y SS + V L++G ++H + TG + +V +G
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
LVNMY KCG I A RVF M+ + +SW SMITG + +A++ ++ M + P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 488 NQVTFVGALAACSN 501
T + +L++C++
Sbjct: 414 GSFTLISSLSSCAS 427
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 257/529 (48%), Gaps = 30/529 (5%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E I I K+G D FV + LV+ + K G++ A+KVF+ + N V+ L+ G V+
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 154 SQPELAIHVFLDM--LEAGNYPTNVTLGTALTACSSLESIRL--GKQIHAYVVKYQTED- 208
E A +F+DM + + + V L ++ S E + L G+++H +V+ D
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+GN L ++Y+ CGS+ A + F + +K+ +SW ++I +NG ++ + + M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
I P FTL S S C ++ ++G Q+H +KLG N+ V N++M LY + G ++
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
E +K+F M + V+WN++I LA+ + S EA+ F +G K +
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGA------LARSERSL----PEAVVCFLNAQRAGQKLNR 517
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TFSS+L+ S L E G+QIH L LK + AL+ Y KCG ++ ++F
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 449 MS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA----- 502
M+ R ++W SMI+G+ ++ L +AL L ML G R + + L+A ++
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
GM A ++ + + L+DM+ + G ++ A F M N W+
Sbjct: 638 GMEVHACSVRACLESDVVVGSA------LVDMYSKCGRLDYALRFFNTMPVR-NSYSWNS 690
Query: 563 FIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
I+G RHG E L + +L P D ++ +L AG E+
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ + Y ++L + +L +HA V+ D V + LV++Y KCG
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALT 183
++ A + F+ +P N SW S+ISGY ++ Q E A+ +F M L+ P +VT L+
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 184 ACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NV 241
ACS + G K + Y + + + G L+ ++ K NV
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 242 MSWTTVIGAC 251
+ W TV+GAC
Sbjct: 790 LIWRTVLGAC 799
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 383/696 (55%), Gaps = 17/696 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++ G ++ + ++ + + + +S+ E +H I+K+G + V LV Y K
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+KVFD + +V+SW S+I+GYV N E + VF+ ML +G T+ +
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ I LG+ +H+ VK + N+L +YS CG L+SA F + +++V+S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T++I G A + ++ F +M EGI P+ +T+T++ + C L G +VH +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
++ V N++M +Y KCG + EA+ +F M ++++WN +I G+ S
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY-----------S 474
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ EALS+F+ L PD T + +L C+ L A ++G +IH ++ G+ SD
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V +LV+MY KCG + A +F +++++ L+SWT MI G+ H +A+ LF M A
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+ ++++FV L ACS++G+V E +F +M+ E KI+P ++HY C++DM R G + +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+ FI+ M P+ IW + GCR H +++L AE++ +L+P++ Y ++ +I+
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A +WE V ++ + L + SWI IK +V F D +P++ I L ++ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 664 AKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY + L D +E A HSEKLA+A G++++ I V K+ +C DC
Sbjct: 775 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K ++ LT REI++RDS R H+F +GHC+CR F
Sbjct: 835 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 271/508 (53%), Gaps = 28/508 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ + S+LQ C + KSL + + + I G D + + L +Y CG+++EA +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + W L++ ++ +I +F M+ +G + T + SSL S+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+Q+H +++K + SVGNSL + Y ++SA K F+ + E++V+SW ++I
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
NG A +GL F +ML GI+ + T+ S+ + C + +G VHS+G+K ++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
R N+++ +Y KCG +D A+ +F MS ++V++ +MIAG+ A++ L+ E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY------AREGLAG-----E 380
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ G+ PD+YT +++L C+R L++G+++H + D+ V AL++
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR--PNQ 489
MY KCG ++ A VF EM + +ISW ++I G++ + +++AL LF ++LL R P++
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDE 499
Query: 490 VTFVGALAACSNAGMV---YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
T L AC++ E GY M + + V + L+DM+ + G + A
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANS---LVDMYAKCGALLLAHM 555
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FD I D V W+V IAG HG
Sbjct: 556 LFDDIASKDL----VSWTVMIAGYGMHG 579
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 213/414 (51%), Gaps = 16/414 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLV 116
G + +L G ++ ++ VS+ C + + +S +H+ VK S +D F T L+
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LL 338
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG+++ A+ VF + +VVS+TS+I+GY + A+ +F +M E G P
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ L C+ + GK++H ++ + D V N+L +Y+ CGS+ A F+ +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVG 295
R K+++SW T+IG +N A + L F+ +L E P+E T+ + C ++ + G
Sbjct: 459 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H ++ GY S+ V NS++ +Y KCG + A LFD ++ +LV+W MIAG+
Sbjct: 519 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM- 577
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H G EA+++F+++ +G++ D +F S+L CS +++G + +
Sbjct: 578 ----------HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 416 KTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
+ V A +V+M + G + +A R M + W +++ G H
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/691 (32%), Positives = 386/691 (55%), Gaps = 20/691 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
PK + +LL C + + L +H I K+G + V L+++Y + G+ E+A+
Sbjct: 448 PKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAE 507
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VF +P +++SW S+++ +V++ + AI + ++ML+ VT TAL+AC +LE
Sbjct: 508 LVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLE 567
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+++ +HA+V+ + + +GN+L ++Y G ++ A K + E++V++W +IG
Sbjct: 568 KLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIG 624
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM-LSLRVGAQVHSLGIKLGYA 308
++ + ++ F+ M EG+ N T+ ++ C + L+ G +H+ + G+
Sbjct: 625 GHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFE 684
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V++S++ +Y +CG ++ + +FD +++ N TWNA+ + +A +
Sbjct: 685 LDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAH-----------YGP 733
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
G EAL +++ + G+ D ++FS L L L++G+Q+H+ +K GF D V A
Sbjct: 734 GEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNA 793
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
++MY KCG I+ R+ R+ SW +I+ A H QA + F +ML G++P+
Sbjct: 794 TMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPD 853
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTFV L+ACS+ G+V E L YF M E+ + ++H +C+ID+ R G + EA FI
Sbjct: 854 HVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFI 913
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
KM PNE +W +A C+ HGN+ELG AA++L +L D +Y + ++ S RW
Sbjct: 914 DKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWG 973
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV V+ + L + SWI++K+KV +F D HPQSA+I+ L+EL + + G
Sbjct: 974 DVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEG 1033
Query: 669 YKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
+ S+ L TDEE HSE++A+AFGL+N+ SP+ + K+ +C DCH+ K
Sbjct: 1034 HMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFK 1093
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+++ + R+I+VRDS R H F G C+C D+
Sbjct: 1094 LVSKIVGRKIVVRDSYRFHHFHGGKCSCSDY 1124
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 228/477 (47%), Gaps = 20/477 (4%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+ +HA VK Q+ F LVN+Y K G+++ AQ VFD + N SW ++ISG+V+
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTS 211
A+ F M E G P++ + + +TAC + G +QIH YVVK +
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG SL Y T GS++ A K F I E N++SWT+++ +NG + L + + G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEA 330
+ T+ ++ CG +G Q+ IK G S++ V NS++ ++ V+EA
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEA 405
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLY 389
++F+ M + ++WN++I SAHNG E+L F + + K D
Sbjct: 406 SRVFNNMQERDTISWNSIITA------------SAHNGRFEESLGHFFWMRRTHPKTDYI 453
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T S++L C L+ G +H L K+G S+V V +L++MY + G E A VF M
Sbjct: 454 TISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTM 513
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R LISW SM+ A+ L +ML N VTF AL+AC N E L
Sbjct: 514 PARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN----LEKL 569
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ + + L+ M+ + G ++EA K M E + V W+ I G
Sbjct: 570 KIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP-ERDVVTWNALIGG 625
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 218/432 (50%), Gaps = 18/432 (4%)
Query: 72 VQTSSYV--SLLQECVNRKSLS-NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
V SSYV S++ C ++ A IH ++VK G + FV T L++ YG G++ EA
Sbjct: 244 VTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEA 303
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
K+F+ + N+VSWTSL+ Y N + ++++ + G T T+ T + C
Sbjct: 304 NKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMF 363
Query: 189 ESIRLGKQIHAYVVKYQTEDDT-SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+G QI V+K + + SV NSL S++ S+ A + FN ++E++ +SW ++
Sbjct: 364 GDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSI 423
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I A NG + L F M + + T++++ CG+ L+ G +H L K G
Sbjct: 424 ITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGL 483
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
SN+ V NS++ +Y + G ++A+ +F M +L++WN+M+A H + D +H
Sbjct: 484 ESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVE------DGKYSH- 536
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
A+ + ++ + + TF++ L+ C LE+ + +HA + ++++G
Sbjct: 537 ----AILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLIIGN 589
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
LV MY K G ++ A +V M R +++W ++I G A+ + +Q F M G+
Sbjct: 590 TLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLS 649
Query: 488 NQVTFVGALAAC 499
N +T V L C
Sbjct: 650 NYITIVNLLGTC 661
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 229/478 (47%), Gaps = 21/478 (4%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++++G ++EEA +VF+N+ + +SW S+I+ N + E ++ F M
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTD 451
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ L AC S + ++ G+ +H + K E + V NSL S+Y+ GS A F+
Sbjct: 452 YITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFH 511
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++++SW +++ + E+G+ + +ML N T T+ S C + L++
Sbjct: 512 TMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKI 571
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
VH+ I NL + N+++ +Y K GL+DEAQK+ M ++VTWNA+I GHA
Sbjct: 572 ---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHAD 628
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC-SRLVALEQGEQIHAL 413
D + F+ + G+ + T ++L C S L+ G IHA
Sbjct: 629 DKD-----------PNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAH 677
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ GF D V ++L+ MY +CG + +S +F ++ + +W ++ + A++ +A
Sbjct: 678 IVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEA 737
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CL 531
L+ M GV +Q +F ALA N ++ E ++ K+ +D Y+
Sbjct: 738 LKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQ---QLHSWIIKLGFELDEYVLNAT 794
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
+DM+ + G I++ F + W++ I+ RHG A ++L L K
Sbjct: 795 MDMYGKCGEIDDVFRILPIPKIRSKRS-WNILISALARHGFFRQATEAFHEMLDLGLK 851
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 174/366 (47%), Gaps = 24/366 (6%)
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
S + +GK +HA VK + +T N+L ++YS GS+ A F+++ ++N SW
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA-QVHSLGIK 304
+I G + ++FF M G+ P+ + + S+ + C + GA Q+H +K
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G SN+ V S+++ Y G V EA KLF+ + N+V+W +++ +A
Sbjct: 278 CGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYAD---------- 327
Query: 365 AHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSD 422
NG T E L+I+ L +G+ T ++++ C G QI +K+G S
Sbjct: 328 --NGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSS 385
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V V +L++M+ +E ASRVF M R ISW S+IT A++ ++L F M
Sbjct: 386 VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFVRL 538
+ + +T L AC +A + G ++ K ++ +C L+ M+ +
Sbjct: 446 THPKTDYITISALLPACGSAQHLKWGRGLHGLITKS-----GLESNVCVCNSLLSMYAQA 500
Query: 539 GCIEEA 544
G E+A
Sbjct: 501 GSSEDA 506
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 39/243 (16%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + +G + S+ L N L + +H+ I+K G D +V+
Sbjct: 735 EEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNAT 794
Query: 116 VNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+++YGKCG +++ ++ +P+I + SW LIS ++ A F +ML+ G P
Sbjct: 795 MDMYGKCGEIDDVFRILP-IPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPD 853
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT + L+ACS G + +V + +S+ S + ++ +
Sbjct: 854 HVTFVSLLSACSH------GGLVDEGLVYF---------SSMTSEFGVPTAIEHCV---- 894
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+I G +G + F KM + PNEF S+ + C +L +
Sbjct: 895 -----------CIIDLLGRSGRLAEAEGFIDKM---PVPPNEFVWRSLLAACKVHGNLEL 940
Query: 295 GAQ 297
G +
Sbjct: 941 GRK 943
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/685 (33%), Positives = 376/685 (54%), Gaps = 21/685 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
Y ++L C + K+L + IH+ I T G D + L+ +Y KCG++E+A+++F+ +
Sbjct: 124 YTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM 183
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+V SW ++I+ Y Q+ E AI ++ DM P+ T + L+ACS+L + G+
Sbjct: 184 SGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGR 240
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+IHA + TE D S+ N+L ++Y+ C L+ A K F R+ ++V+SW+ +I A E
Sbjct: 241 KIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETD 300
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + F+SKM EG++PN +T S+ C ++ LR G VH + GY L
Sbjct: 301 LFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGT 360
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ LY G +DEA+ LFD + + + W +I G+++ H G L +
Sbjct: 361 ALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ---------GHRTGV--LEL 409
Query: 376 FSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ ++ N++ + +S +++ C+ L A Q H+ G +SD V+ T+LVNMY
Sbjct: 410 YREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMYS 469
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
+ G +E A +VF +MS+R ++WT++I G+A H AL L+++M L G P+++TF+
Sbjct: 470 RWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMV 529
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+AG+ + F +Q +Y + P + HY C+ID+ R G + +A + I M E
Sbjct: 530 VLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVE 589
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN+V WS + R H +++ +AA Q+ KL P D SY +L ++ G +A V+
Sbjct: 590 PNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASVR 649
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
N + + SWI + D+++ F D HP+ EIF L L K K GY +
Sbjct: 650 NTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPESE 709
Query: 675 FELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L D +E HSEKLAIAFGL+ T + + + + +C DCH+ +K I+++
Sbjct: 710 EVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAIA 769
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRDS R HKF +G C+C D+
Sbjct: 770 RREIIVRDSSRFHKFRDGQCSCGDY 794
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/543 (28%), Positives = 271/543 (49%), Gaps = 30/543 (5%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSS-YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
P + FQ L G + +S Y L++C + L + IH I S + F+
Sbjct: 7 PAKVRRFQ--LKEEKAGSRFDSSGHYRDALRQC---QDLESVRQIHDRISGAAS-ANVFL 60
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+V YGKCG++ A+ FD + R N SW S+++ Y QN A+ ++ M
Sbjct: 61 GNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DL 117
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAI 230
P V T L AC+S++++ GK IH+ + + + D + NSL ++Y+ CGSL A
Sbjct: 118 QPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F R+ ++V SW +I A ++G + +R + M ++P+ T TS+ S C +
Sbjct: 178 RLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLG 234
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L G ++H+L G +L ++N+++ +Y +C +D+A K+F + ++V+W+AMIA
Sbjct: 235 LLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIA 294
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
A+ DL EA+ +SK+ G++P+ YTF+S+L C+ + L G +
Sbjct: 295 AFAE-TDLFD----------EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAV 343
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H L G+ +V GTALV++Y G ++ A +F ++ R WT +I G++
Sbjct: 344 HDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHR 403
Query: 471 HQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
L+L+ +M V ++ + ++AC++ G +A ++ + I +
Sbjct: 404 TGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV-LAT 462
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLK 587
L++M+ R G +E A KM + + W+ IAG +HG + LG Y +L +
Sbjct: 463 SLVNMYSRWGNLESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAE 521
Query: 588 PKD 590
P +
Sbjct: 522 PSE 524
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 200/410 (48%), Gaps = 21/410 (5%)
Query: 59 FQEALSVLTE---GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
F+EA+ + + P V+T + S+L C N L IHA I G+ D + L
Sbjct: 204 FEEAIRLYEDMDVEPSVRT--FTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNAL 261
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +C +++A K+F LPR +VVSW+++I+ + + + AI + M G P
Sbjct: 262 LTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 321
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T + L AC+S+ +R G+ +H ++ + G +L LY++ GSL+ A F++
Sbjct: 322 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 381
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRV 294
I ++ WT +IG + G L + +M + P + + + S C ++ +
Sbjct: 382 IENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 441
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
Q HS G S+ + S++ +Y + G ++ A+++FD MS + + W +IAG+A+
Sbjct: 442 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 501
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
H AL ++ ++ G +P TF +L CS EQG+Q+ ++
Sbjct: 502 -----------HGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-IS 549
Query: 415 LKTGFL--SDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMI 461
+++ + ++ + ++++ + GR+ A + M ++W+S++
Sbjct: 550 IQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 599
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/726 (33%), Positives = 385/726 (53%), Gaps = 58/726 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN--VYGKCGNMEEAQ 129
++ +++LL +C + SL IH+ I+K+G H F + L+ ++ A
Sbjct: 23 LENHPHLNLLAKCPDIPSLKQ---IHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYAL 79
Query: 130 KVFDNLPR--INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+F ++ N+ W +LI + P ++H+F ML +G YP + T + +C+
Sbjct: 80 SLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAK 139
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL--------------------- 226
++ KQ+HA+ +K V SL +YS G L
Sbjct: 140 SKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTAL 199
Query: 227 ----------NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ A + F+ I K+V+SW +I ++G + L F++M + PN+
Sbjct: 200 ITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQ 259
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ S+ S CG + SL +G + S G+ NL++ N+++ +Y KCG + A+KLFDG
Sbjct: 260 STMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDG 319
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M +++ WN MI G+ LS + EAL +F + + P+ TF ++L
Sbjct: 320 MEDKDVILWNTMIGGYCH--------LSLYE---EALVLFEVMLRENVTPNDVTFLAVLP 368
Query: 397 ICSRLVALEQGEQIHALTLK----TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
C+ L AL+ G+ +HA K TG +++V + T+++ MY KCG +E A +VF M +R
Sbjct: 369 ACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSR 428
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+L SW +MI+G A + + +AL LFE+M+ G +P+ +TFVG L+AC+ AG V YF
Sbjct: 429 SLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYF 488
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M K+Y I P + HY C+ID+ R G +EA + M+ EP+ IW + CR HG
Sbjct: 489 SSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQ 548
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+E G Y AE+L +L+P++ +Y +L +I+ AGRW+DVA ++ ++ + + + I
Sbjct: 549 VEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIE 608
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYH 687
I V+ F D HPQS IF++LDE+ + G+ S L D +E A H
Sbjct: 609 IDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQH 668
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLAIAFGL++T S I +VK+ +CR+CH+ K+I+ + REII RD R H F +G
Sbjct: 669 SEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDG 728
Query: 748 HCTCRD 753
C+C D
Sbjct: 729 FCSCND 734
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 207/438 (47%), Gaps = 52/438 (11%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + ++ SL + C K+ A+ +HAH +K H V T L+++Y + G
Sbjct: 118 MLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGE 177
Query: 125 MEEAQKVFDNLPRINVVSWTSLIS-------------------------------GYVQN 153
+ A+ VFD + VS+T+LI+ GYVQ+
Sbjct: 178 LRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQS 237
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+ E A+ F M EA P T+ + L+AC L S+ LGK I ++V + +
Sbjct: 238 GRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLV 297
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L +YS CG + +A K F+ + +K+V+ W T+IG + L F ML E +
Sbjct: 298 NALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVT 357
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIK----LGYASNLRVRNSIMYLYLKCGLVDE 329
PN+ T ++ C ++ +L +G VH+ K G +N+ + SI+ +Y KCG V+
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDL 388
A+++F M +L +WNAMI+G A NG E AL +F ++ + G +PD
Sbjct: 418 AEQVFRSMGSRSLASWNAMISGLAM------------NGHAERALGLFEEMINEGFQPDD 465
Query: 389 YTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF- 446
TF +L+ C++ +E G + ++ G + ++++ + G+ + A +
Sbjct: 466 ITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMG 525
Query: 447 -VEMSTRTLISWTSMITG 463
+EM I W S++
Sbjct: 526 NMEMEPDGAI-WGSLLNA 542
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 373/652 (57%), Gaps = 29/652 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGN-MEEAQKVFDN 134
Y ++++ C N + + ++KTG + D V L++++ K N E A KVFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ +NVV+WT +I+ +Q P AI FLDM+ +G TL + +AC+ LE++ LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSWTTVIGAC 251
KQ+H++ ++ DD V SL +Y+ C GS++ K F+R+ + +VMSWT +I
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 252 GENGE-AVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+N A + + FS+M+++G ++PN FT +S CG + RVG QV K G AS
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V NS++ +++K +++AQ+ F+ +S NLV++N + G + ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE---------- 456
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+A + S++ + +TF+S+L+ + + ++ +GEQIH+ +K G + V AL
Sbjct: 457 -QAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG I+ ASRVF M R +ISWTSMITGFA H + + L+ F M+ GV+PN+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT+V L+ACS+ G+V E +F M +++KIKP M+HY C++D+ R G + +AF+FI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M F+ + ++W F+ CR H N ELG AA ++L+L P + +Y L +I+ AG+WE+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ +E L + SWI + DK++ F D HP + +I+ LD L+ + K GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 670 KQQESFELTDEESASVY---------HSEKLAIAFGLLNTPIVSPILVVKST 712
L E + HSEK+A+AFGL++T P+ +++++
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPLKMIQTS 807
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 167/639 (26%), Positives = 315/639 (49%), Gaps = 68/639 (10%)
Query: 21 PSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLT-EGPKVQTS-SYV 78
PS + +K + + +LI + N+ +R G AL ++ +G + S ++
Sbjct: 9 PSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLR--GAVSALDLMARDGIRPMDSVTFS 66
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL+ C+ + +++HA +++ D + L+++Y K G+ +A+ VF+ + R
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 139 ---NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSW+++++ Y N + AI VF++ LE G P + + ACS+ + + +G+
Sbjct: 127 GKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR 186
Query: 196 QIHAYVVKY-QTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
+++K E D VG SL ++ S +A K F+++ E NV++WT +I C +
Sbjct: 187 VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + +RFF M+ G + ++FTL+S+ S C + +L +G Q+HS I+ G + V
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304
Query: 314 RNSIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
S++ +Y KC G VD+ +K+FD M ++++W A+I G+ + +LA T
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA----------T 354
Query: 371 EALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+++FS++ + G ++P+ +TFSS C L G+Q+ K G S+ V ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++M+ K R+E A R F +S + L+S+ + + G + QA +L ++ + +
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA--- 544
TF L+ +N G + + ++ + K+ + +C LI M+ + G I+ A
Sbjct: 475 FTFASLLSGVANVGSIRKGE---QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 545 FDFIKKMD-------------------------------FEPNEVIWSVFIAGCRRHGNM 573
F+F++ + +PNEV + ++ C G +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 574 ELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + + K+KPK E YA ++D+ AG D
Sbjct: 592 SEGWRHFNSMYEDHKIKPK-MEHYACMVDLLCRAGLLTD 629
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 55 RSLGFQEALSVLTEGPK----VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+L F++A +L+E + V ++ SLL N S+ E IH+ +VK G +
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+++Y KCG+++ A +VF+ + NV+SWTS+I+G+ ++ + F M+E G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P VT L+ACS + + G + ++ ++ + + L G L A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE----FTLTSISS 284
+ N + + +V+ W T +GAC + G K+L + PNE L++I +
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQLSNIYA 688
Query: 285 VCGTM---LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
G +R + +L +K G S + V + I Y+ A +++D + +
Sbjct: 689 CAGKWEESTEMRRKMKERNL-VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/691 (35%), Positives = 374/691 (54%), Gaps = 22/691 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ ++L + + +HA IVK G FV L+ +Y K + +
Sbjct: 199 EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGD 258
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD++ + V+W +I GY +F M AG + TAL CS
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQ 318
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTT 246
+ KQ+H VVK E + +L YS C S++ A K F+ NV++WT
Sbjct: 319 QRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTA 378
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG +N + + F +M EG++PN FT +++ + G SL +Q+H+ IK
Sbjct: 379 MIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV--LAGKPSSLL--SQLHAQIIKAY 434
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V +++ Y+K G V E+ ++F + ++V W+AM+ G AQ D K
Sbjct: 435 YEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEK------ 488
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
A+ +F +L G+KP+ YTFSS++ CS A +E G+QIHA +K+G + + V
Sbjct: 489 -----AMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+AL+ MY K G IE A +VF R ++SW SMITG+ H + +AL++F+ M G+
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGL 603
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ VTF+G L AC++AG+V E YF +M K+Y I ++HY C++D++ R G ++A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAM 663
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
D I M F + IW +A CR H N+ELG AAE+L+ L+P D Y +L +I AG
Sbjct: 664 DIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAG 723
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
WE+ A V+ L E K+ + SWI IK++++SF D HP S ++ L+EL K K
Sbjct: 724 NWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLK 783
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ ++ D +E+ HSE+LAIA+GL+ P +PI + K+ +C DCHN
Sbjct: 784 DMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHN 843
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
I++I+ + R +IVRDS R H F G C+C
Sbjct: 844 VIELISLIEERTLIVRDSNRFHHFKGGVCSC 874
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 242/484 (50%), Gaps = 29/484 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K+G +D V T LV++Y K + E+ + +FD + NVVSWTSL+SGY +N
Sbjct: 126 VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGL 185
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ IH+ M G P T T L A + I G Q+HA +VK E T V N+
Sbjct: 186 NDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNA 245
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y + A F+ + ++ ++W +IG G ++G + F +M G++ +
Sbjct: 246 LICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLS 305
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ +C L Q+H +K GY +R ++M Y KC VDEA KLF
Sbjct: 306 RTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS 365
Query: 336 --GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
+H N+VTW AMI G Q +N +A+ +F +++ G++P+ +T+S+
Sbjct: 366 MADAAH-NVVTWTAMIGGFVQ-----------NNNNEKAVDLFCQMSREGVRPNHFTYST 413
Query: 394 ILT-ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+L S L++ Q+HA +K + V TAL++ Y K G + ++RVF + +
Sbjct: 414 VLAGKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+++W++M+TG A S +A+++F ++ GV+PN+ TF + ACS++ E
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Query: 513 EMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+K + +C L+ M+ + G IE A + + E + V W+ I G
Sbjct: 529 HAT----AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYG 583
Query: 569 RHGN 572
+HG+
Sbjct: 584 QHGD 587
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 228/469 (48%), Gaps = 26/469 (5%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A ++FD P ++ + L+ + +N+ A+H+F D+ +G +TL AL C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L +G+Q+H +K +D SVG SL +Y F+ + KNV+SWT++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ NG + + ++M EG+ PN FT ++ + G QVH++ +K G+
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
V N+++ +YLK +V +A+ +FD M + VTWN MI G+A +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI-----------G 285
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
E +F ++ +G+K F + L +CS+ L +Q+H +K G+ + T
Sbjct: 286 FYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT 345
Query: 428 ALVNMYKKCGRIERASRVF-VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+ Y KC ++ A ++F + + +++WT+MI GF ++ + +A+ LF M GVR
Sbjct: 346 ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVR 405
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
PN T+ LA ++ + + + ++++ Y+ P + L+D +V+ G + E+
Sbjct: 406 PNHFTYSTVLAGKPSSLL---SQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESAR 460
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
F I D V WS + G + + E QL+K +KP +
Sbjct: 461 VFYSIPAKDI----VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNE 505
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 202/388 (52%), Gaps = 18/388 (4%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GFQ + G K+ + + + L+ C ++ L+ + +H +VK G + T L+
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349
Query: 118 VYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
Y KC +++EA K+F NVV+WT++I G+VQN+ E A+ +F M G P +
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T T L S L Q+HA ++K E SV +L Y G++ + + F I
Sbjct: 410 TYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI 465
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-GTMLSLRVG 295
K++++W+ ++ + ++ + + F +++ EG++PNE+T +S+ + C + ++ G
Sbjct: 466 PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H+ +K G ++ L V ++++ +Y K G ++ A+K+F ++V+WN+MI G+ Q
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ- 584
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H +AL +F + + G+ D TF +LT C+ +E+GE+ + +
Sbjct: 585 ----------HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMI 634
Query: 416 KTGFLSDVVVG-TALVNMYKKCGRIERA 442
K + + + +V++Y + G ++A
Sbjct: 635 KDYHIDKKIEHYSCMVDLYSRAGMFDKA 662
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 383/696 (55%), Gaps = 17/696 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++ G ++ + ++ + + + +S+ E +H I+K+G + V LV Y K
Sbjct: 35 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 94
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+KVFD + +V+SW S+I+GYV N E + VF+ ML +G T+ +
Sbjct: 95 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 154
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ I LG+ +H+ VK + N+L +YS CG L+SA F + +++V+S+
Sbjct: 155 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 214
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T++I G A + ++ F +M EGI P+ +T+T++ + C L G +VH +
Sbjct: 215 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 274
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
++ V N++M +Y KCG + EA+ +F M ++++WN +I G+ S
Sbjct: 275 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY-----------S 323
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ EALS+F+ L PD T + +L C+ L A ++G +IH ++ G+ SD
Sbjct: 324 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 383
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V +LV+MY KCG + A +F +++++ L+SWT MI G+ H +A+ LF M A
Sbjct: 384 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 443
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+ ++++FV L ACS++G+V E +F +M+ E KI+P ++HY C++DM R G + +
Sbjct: 444 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 503
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+ FI+ M P+ IW + GCR H +++L AE++ +L+P++ Y ++ +I+
Sbjct: 504 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 563
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A +WE V ++ + L + SWI IK +V F D +P++ I L ++ +
Sbjct: 564 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 623
Query: 664 AKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY + L D +E A HSEKLA+A G++++ I V K+ +C DC
Sbjct: 624 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 683
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K ++ LT REI++RDS R H+F +GHC+CR F
Sbjct: 684 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 719
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 240/448 (53%), Gaps = 28/448 (6%)
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + W L++ ++ +I +F M+ +G + T + SSL S+
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+Q+H +++K + SVGNSL + Y ++SA K F+ + E++V+SW ++I
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
NG A +GL F +ML GI+ + T+ S+ + C + +G VHS+G+K ++
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
R N+++ +Y KCG +D A+ +F MS ++V++ +MIAG+ A++ L+ E
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY------AREGLAG-----E 229
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ G+ PD+YT +++L C+R L++G+++H + D+ V AL++
Sbjct: 230 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 289
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR--PNQ 489
MY KCG ++ A VF EM + +ISW ++I G++ + +++AL LF ++LL R P++
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDE 348
Query: 490 VTFVGALAACSNAGMV---YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
T L AC++ E GY M + + V + L+DM+ + G + A
Sbjct: 349 RTVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANS---LVDMYAKCGALLLAHM 404
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FD I D V W+V IAG HG
Sbjct: 405 LFDDIASKDL----VSWTVMIAGYGMHG 428
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 213/414 (51%), Gaps = 16/414 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLV 116
G + +L G ++ ++ VS+ C + + +S +H+ VK S +D F T L+
Sbjct: 129 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LL 187
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG+++ A+ VF + +VVS+TS+I+GY + A+ +F +M E G P
Sbjct: 188 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 247
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ L C+ + GK++H ++ + D V N+L +Y+ CGS+ A F+ +
Sbjct: 248 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 307
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVG 295
R K+++SW T+IG +N A + L F+ +L E P+E T+ + C ++ + G
Sbjct: 308 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 367
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H ++ GY S+ V NS++ +Y KCG + A LFD ++ +LV+W MIAG+
Sbjct: 368 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM- 426
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H G EA+++F+++ +G++ D +F S+L CS +++G + +
Sbjct: 427 ----------HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 476
Query: 416 KTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
+ V A +V+M + G + +A R M + W +++ G H
Sbjct: 477 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 530
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/755 (32%), Positives = 391/755 (51%), Gaps = 76/755 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ + +L+ C S H I G + F+ LV +Y +CG+
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 125 MEEAQKVFDNLPRI---NVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTN----- 175
+EEA +FD + + +V+SW S++S +V++S A+ +F M L PTN
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+++ L AC SL+++ K++H ++ T D VGN+L Y+ CG + +A+K FN
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 236 IREKNVMSW-----------------------------------TTVIGACGENGEAVQG 260
+ K+V+SW T VI + G + +
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL----------GYASN 310
L F +M+ G PN T+ S+ S C ++ + G ++H+ +K G +
Sbjct: 241 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 300
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
L V N+++ +Y KC A+ +FD + N+VTW MI GHAQ D
Sbjct: 301 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD----------- 349
Query: 369 GTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL--SDVV 424
+AL +F ++ S G+ P+ YT S IL C+ L A+ G+QIHA L+ S
Sbjct: 350 SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYF 409
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V L+NMY KCG ++ A VF MS ++ ISWTSM+TG+ H +AL +F+ M AG
Sbjct: 410 VANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 469
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ +TF+ L ACS+ GMV + L YF+ M +Y + P +HY ID+ R G +++A
Sbjct: 470 FVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKA 529
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ +K M EP V+W ++ CR H N+EL +A +L+++ ++ SY ++ +I+ +A
Sbjct: 530 WKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATA 589
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GRW+DVA +++L ++ + + SW++ + SF D HP S +I+ +L+ L+++
Sbjct: 590 GRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI 649
Query: 665 KCFGYKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY + +F L DEE + V HSEKLA+A+GLL T PI + K+ +C DCH
Sbjct: 650 KAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCH 709
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I+ + EI+VRD R H F NG C+C +
Sbjct: 710 SAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 744
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 195/455 (42%), Gaps = 79/455 (17%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT----------GS 105
EAL+V + G + +S+L C + + S IHA+ +K G
Sbjct: 238 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 297
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVF 163
+D V L+++Y KC + + A+ +FD++P NVV+WT +I G+ Q A+ +F
Sbjct: 298 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 357
Query: 164 LDMLEA--GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS--VGNSLCSL 219
++M+ G P T+ L AC+ L +IR+GKQIHAYV+++ D ++ V N L ++
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 417
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
YS CG +++A F+ + +K+ +SWT+++ G +G + L F KM G P++ T
Sbjct: 418 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 477
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+ C CG+VD+ FD MS
Sbjct: 478 LVVLYACS-----------------------------------HCGMVDQGLSYFDSMSA 502
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
+T A +A DL A G + + + M+P + ++L+ C
Sbjct: 503 DYGLTPRAEHYAYAI-------DLLARFGRLD--KAWKTVKDMPMEPTAVVWVALLSACR 553
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALV-NMYKKCGRIERASRVFVEM-----STRT 453
+E E HAL ++ L+ N+Y GR + +R+ M R
Sbjct: 554 VHSNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 611
Query: 454 LISW-------TSMITGFANHSLSHQALQLFEDML 481
SW S G +H LS Q L E ++
Sbjct: 612 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLI 646
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/690 (33%), Positives = 375/690 (54%), Gaps = 19/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++ +L+ C L+ +H H+V+ G D V+ L+ +Y KCG+++ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD +PR +++SW ++ISGY +N + +F M P +TL + ++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
RLG+ IHAYV+ D SV NSL +Y GS A K F+R+ K+++SWTT+I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
N + + + M + ++P+E T+ ++ S C T+ L G ++H L IK
Sbjct: 371 SGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y KC +D+A +F + N+++W ++IAG L +N
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-----------LRLNNR 479
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL F ++ + ++P+ T ++ L C+R+ AL G++IHA L+TG D + A
Sbjct: 480 CFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY +CGR+ A F + + SW ++TG++ ++LF+ M+ A VRP+
Sbjct: 539 LLDMYVRCGRMNIAWNQF-NSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPD 597
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++TF+ L C + MV + L YF M+ EY + P + HY C++D+ R G ++EA FI
Sbjct: 598 EITFISLLCGCGKSQMVRQGLMYFSKME-EYGVTPNLKHYACVVDLLGRAGELQEAHKFI 656
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+KM P+ +W + CR H N++LG +A+++ +L Y +L +++ G+W
Sbjct: 657 QKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWR 716
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+VA V+ + +E L+ SW+ +K KV++F +D HPQ+ EI VLD EK G
Sbjct: 717 EVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVG 776
Query: 669 YKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
DE S HSE+ AIAFGL+N+ PI V K+ MC CH+ +K
Sbjct: 777 LTTSSESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVK 836
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
I+ REI VRDS+ H F +G C+C D
Sbjct: 837 FISKTVRREISVRDSEHFHHFKDGECSCGD 866
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/593 (25%), Positives = 286/593 (48%), Gaps = 58/593 (9%)
Query: 59 FQEALSVLTEGPKVQTSS----YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EA+ +L +++ + +V+L++ C +++ +++ + + + +
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNA 134
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+ ++ + GN+ +A VF + N+ SW L+ GY + + AI ++ ML G
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKP 194
Query: 175 NV-TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+V T L C + + G+++H +VV+Y E D V N+L ++Y CG + SA F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+R+ ++++SW +I ENG +GL+ F M + P+ TLTS+ S C + R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G +H+ I G+A ++ V NS+ +YL G EA+KLF M ++V+W MI+G+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYE 374
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
K A+ + ++ +KPD T +++L+ C+ L L+ G ++H L
Sbjct: 375 YNFLPEK-----------AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K +S V+V L+NMY KC I++A +F + + +ISWTS+I G ++ +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CL 531
L F M + ++PN +T ALAAC+ G + + E+ + +D ++ L
Sbjct: 484 LIFFRQMKMT-LQPNAITLTAALAACARIGAL---MCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 532 IDMFVRLG---------------------------------CIEEAFDFIKKMDFEPNEV 558
+DM+VR G + E FD + K P+E+
Sbjct: 540 LDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEI 599
Query: 559 IWSVFIAGCRRHGNMELG--FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
+ + GC + + G +++ + + P + + YA ++D+ AG ++
Sbjct: 600 TFISLLCGCGKSQMVRQGLMYFSKMEEYGVTP-NLKHYACVVDLLGRAGELQE 651
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 161/325 (49%), Gaps = 27/325 (8%)
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G C NG+ + ++ + M + +E ++ +C + G++V+S+ + +
Sbjct: 68 GLCA-NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNS 126
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++ + N+ + ++++ G + +A +F MS NL +WN ++ G+A+
Sbjct: 127 LSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYF---------- 176
Query: 369 GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ ++ + L G+KPD+YTF +L C + L +G ++H ++ G+ D+ V
Sbjct: 177 -DEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVN 235
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+ MY KCG ++ A +F M R +ISW +MI+G+ + + H+ L+LF M V P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDP 295
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQK--EYKIKP--VMDHYMC--LIDMFVRLGCI 541
+ +T ++AC E LG + + Y I +D +C L M++ G
Sbjct: 296 DLMTLTSVISAC-------ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSW 348
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAG 566
EA +MD + + V W+ I+G
Sbjct: 349 REAEKLFSRMDCK-DIVSWTTMISG 372
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 106/216 (49%), Gaps = 15/216 (6%)
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
L A+ EA+ + + + + D F +++ +C A E+G +++++ L +
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLS 128
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML- 481
V +G A + M+ + G + A VF +MS R L SW ++ G+A +A+ L+ ML
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLW 188
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+ GV+P+ TF L C G+ A G + +++ Y++ +D LI M+V+
Sbjct: 189 VGGVKPDVYTFPCVLRTC--GGIPDLARGREVHVHVVRYGYELD--IDVVNALITMYVKC 244
Query: 539 GCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G ++ A FD + + D + W+ I+G +G
Sbjct: 245 GDVKSARLLFDRMPRRDI----ISWNAMISGYFENG 276
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/755 (32%), Positives = 391/755 (51%), Gaps = 76/755 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ + +L+ C S H I G + F+ LV +Y +CG+
Sbjct: 108 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 167
Query: 125 MEEAQKVFDNLPRI---NVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTN----- 175
+EEA +FD + + +V+SW S++S +V++S A+ +F M L PTN
Sbjct: 168 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 227
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+++ L AC SL+++ K++H ++ T D VGN+L Y+ CG + +A+K FN
Sbjct: 228 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 287
Query: 236 IREKNVMSW-----------------------------------TTVIGACGENGEAVQG 260
+ K+V+SW T VI + G + +
Sbjct: 288 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 347
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL----------GYASN 310
L F +M+ G PN T+ S+ S C ++ + G ++H+ +K G +
Sbjct: 348 LNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDED 407
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
L V N+++ +Y KC A+ +FD + N+VTW MI GHAQ D
Sbjct: 408 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD----------- 456
Query: 369 GTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL--SDVV 424
+AL +F ++ S G+ P+ YT S IL C+ L A+ G+QIHA L+ S
Sbjct: 457 SNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYF 516
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V L+NMY KCG ++ A VF MS ++ ISWTSM+TG+ H +AL +F+ M AG
Sbjct: 517 VANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAG 576
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ +TF+ L ACS+ GMV + L YF+ M +Y + P +HY ID+ R G +++A
Sbjct: 577 FVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKA 636
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ +K M EP V+W ++ CR H N+EL +A +L+++ ++ SY ++ +I+ +A
Sbjct: 637 WKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATA 696
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GRW+DVA +++L ++ + + SW++ + SF D HP S +I+ +L+ L+++
Sbjct: 697 GRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRI 756
Query: 665 KCFGYKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY + +F L DEE + V HSEKLA+A+GLL T PI + K+ +C DCH
Sbjct: 757 KAMGYVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCH 816
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I+ + EI+VRD R H F NG C+C +
Sbjct: 817 SAFTYISKIVDHEIVVRDPSRFHHFKNGSCSCGGY 851
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 161/594 (27%), Positives = 274/594 (46%), Gaps = 89/594 (14%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T +V Y CG + A V + + V W LI +++ + + AI+V ML AG
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+ TL L AC L S R G H + E + + N+L ++YS CGSL A
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 233 FNRIREK---NVMSWTTVIGACGENGEAVQGLRFFSKM--LSEGIQPNE----FTLTSIS 283
F+ I ++ +V+SW +++ A ++ A L FSKM + NE ++ +I
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
CG++ ++ +VH I+ G ++ V N+++ Y KCGL++ A K+F+ M ++V
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 294
Query: 344 TWNAMIAGHAQ----------MMDLAKDDL--------------SAHNGGTEALSIFSKL 379
+WNAM+AG++Q ++ K+++ S EAL++F ++
Sbjct: 295 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS----------DVVVGTAL 429
SG P+ T S+L+ C+ L A QG +IHA +LK L+ D++V AL
Sbjct: 355 IFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNAL 414
Query: 430 VNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA--GV 485
++MY KC + A +F + + R +++WT MI G A + S+ AL+LF +M+ GV
Sbjct: 415 IDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGV 474
Query: 486 RPNQVTFVGALAACSN--AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
PN T L AC++ A + + + + + +Y CLI+M+ + G ++
Sbjct: 475 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVAN-CLINMYSKCGDVDT 533
Query: 544 A----------------------------------FDFIKKMDFEPNEVIWSVFIAGCRR 569
A FD ++K F P+++ + V + C
Sbjct: 534 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 593
Query: 570 HGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTRE 619
G ++ G F + L P+ E YA +D+ GR + VK++ E
Sbjct: 594 CGMVDQGLSYFDSMSADYGLTPR-AEHYAYAIDLLARFGRLDKAWKTVKDMPME 646
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 186/416 (44%), Gaps = 65/416 (15%)
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
S+G + + Y CG+ + A+ R+ + W +I + G + +ML
Sbjct: 52 SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 111
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G + + FTL + CG + S R G+ H L G+ SN+ + N+++ +Y +CG ++EA
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171
Query: 331 QKLFDGMSHV---NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN------S 381
+FD ++ ++++WN++++ H + + N T AL +FSK+
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVK----------SSNAWT-ALDLFSKMTLIVHEKP 220
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
+ + D+ + +IL C L A+ Q +++H ++ G DV VG AL++ Y KCG +E
Sbjct: 221 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 280
Query: 442 ASRVFVEMSTRTLISWTSM-----------------------------------ITGFAN 466
A +VF M + ++SW +M I G++
Sbjct: 281 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 340
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
SH+AL +F M+ +G PN VT + L+AC++ G + + K + D
Sbjct: 341 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 400
Query: 527 H---------YMCLIDMFVRLGCIEEAFDFIKKMDFEP-NEVIWSVFIAGCRRHGN 572
Y LIDM+ + + A + E N V W+V I G ++G+
Sbjct: 401 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGD 456
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 195/455 (42%), Gaps = 79/455 (17%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT----------GS 105
EAL+V + G + +S+L C + + S IHA+ +K G
Sbjct: 345 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 404
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVF 163
+D V L+++Y KC + + A+ +FD++P NVV+WT +I G+ Q A+ +F
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 464
Query: 164 LDMLEA--GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS--VGNSLCSL 219
++M+ G P T+ L AC+ L +IR+GKQIHAYV+++ D ++ V N L ++
Sbjct: 465 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
YS CG +++A F+ + +K+ +SWT+++ G +G + L F KM G P++ T
Sbjct: 525 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 584
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+ C CG+VD+ FD MS
Sbjct: 585 LVVLYACS-----------------------------------HCGMVDQGLSYFDSMSA 609
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
+T A +A DL A G + + + M+P + ++L+ C
Sbjct: 610 DYGLTPRAEHYAYAI-------DLLARFGRLD--KAWKTVKDMPMEPTAVVWVALLSACR 660
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALV-NMYKKCGRIERASRVFVEM-----STRT 453
+E E HAL ++ L+ N+Y GR + +R+ M R
Sbjct: 661 VHSNVELAE--HALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRP 718
Query: 454 LISW-------TSMITGFANHSLSHQALQLFEDML 481
SW S G +H LS Q L E ++
Sbjct: 719 GCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLI 753
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/582 (37%), Positives = 334/582 (57%), Gaps = 15/582 (2%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T ++AC L+SIR K++ Y++ + D + N + ++ CG + A + F+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EKN++SW T+IG + G+ + R F M + ++ + + G
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+HS +K G ++ V +++ +Y KCG +++AQ +FD M V WN++IAG+A
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA--- 309
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H EALS++ ++ SG+K D +TFS I+ IC+RL +LE +Q HA ++
Sbjct: 310 --------LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVR 361
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF D+V TALV++Y K GRIE A VF M + +ISW ++I G+ NH +A+++
Sbjct: 362 HGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEM 421
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
FE ML G+ PN VTF+ L+ACS +G+ FE M +++KIKP HY C+I++
Sbjct: 422 FERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLG 481
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G ++EAF IK F+P +W+ + CR H N ELG +AAE+L + P+ +Y +
Sbjct: 482 REGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVV 541
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
LL+I+ +GR E+ A V + L SWI IK + Y F D H QS EI++
Sbjct: 542 LLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEIYQK 601
Query: 657 LDELVEKAKCFGYKQQESFELTD----EESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
LDEL+ + GY Q+ F L D EE +YHSEKLAIAFGL+NT +P+ +V+S
Sbjct: 602 LDELMLEISKHGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSH 661
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ IK+I +T REI+VRD+ R H F +G C+C D+
Sbjct: 662 RICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDY 703
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/548 (24%), Positives = 248/548 (45%), Gaps = 84/548 (15%)
Query: 15 ETKSRQPSSSLATLKDKNHTVSYQRSGSKL-----IQLNGNSEPVRSLGFQEALSVLTEG 69
ET+ R+PSS L +K V ++R L ++LNG +
Sbjct: 88 ETQLRKPSSELCGQIEK--LVFFKRYHEALELFEILELNGAYD----------------- 128
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
+ + +Y +L+ C+ KS+ + + +++ +G D ++ ++ ++ KCG M +A+
Sbjct: 129 --MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDAR 186
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
++FD +P N++SW ++I G V A +FL M + + + T + A + L
Sbjct: 187 RLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLG 246
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
I G+Q+H+ +K D V +L +YS CGS+ A F+++ EK + W ++I
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIA 306
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+G + + L + +M G++ + FT + I +C + SL Q H+ ++ G+
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ +++ LY K G +++A+ +FD M H N+++WNA+IAG+ H G
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGN-----------HGRG 415
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ +F ++ GM P+ TF ++L+ CS
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACS------------------------------ 445
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLIS-----WTSMITGFANHSLSHQALQLFEDMLLAG 484
G +R +F MS I + MI L +A L +D A
Sbjct: 446 -----YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKD---AP 497
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP-VMDHYMCLIDMFVRLGCIEE 543
+P + L AC +E LG F +K Y + P + +Y+ L++++ R G +EE
Sbjct: 498 FKPTVNMWAALLTAC-RVHKNFE-LGKFA-AEKLYGMGPEKLSNYVVLLNIYNRSGRLEE 554
Query: 544 AFDFIKKM 551
A I+ +
Sbjct: 555 AAAVIQTL 562
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 243/694 (35%), Positives = 374/694 (53%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ ++L + + +HA IVK G FV L+ +Y K + +
Sbjct: 199 EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGD 258
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD++ + V+W +I GY +F M AG + TAL CS
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQ 318
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTT 246
+ KQ+H VVK E + +L YS C S++ A K F+ NV++WT
Sbjct: 319 QRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTA 378
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG +N + + F +M EG++PN FT +++ + G SL +Q+H+ IK
Sbjct: 379 MIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV--LAGKPSSLL--SQLHAQIIKAY 434
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V +++ Y+K G V E+ ++F + ++V W+AM+ G AQ D K
Sbjct: 435 YEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEK------ 488
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
A+ +F +L G+KP+ YTFSS++ CS A +E G+QIHA +K+G + + V
Sbjct: 489 -----AMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCV 543
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+AL+ MY K G IE A +VF R ++SW SMITG+ H + +AL++F+ M G+
Sbjct: 544 SSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGL 603
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ VTF+G L AC++AG+V E YF +M K+Y I +HY C++D++ R G ++A
Sbjct: 604 PLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAM 663
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
D I M F + IW +A CR H N+ELG AAE+L+ L+P D Y +L +I AG
Sbjct: 664 DIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAG 723
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
WE+ A V+ L E K+ + SWI IK++++SF D HP S ++ L+EL K K
Sbjct: 724 NWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLK 783
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ ++ D +E+ HSE+LAIA+GL+ P +PI + K+ +C DCHN
Sbjct: 784 DMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAPIQIEKNLRICGDCHN 843
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I++I+ + R +IVRDS R H F G C+C +
Sbjct: 844 VIELISLIEERTLIVRDSNRFHHFKGGVCSCGGY 877
Score = 215 bits (548), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 143/484 (29%), Positives = 242/484 (50%), Gaps = 29/484 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K+G +D V T LV++Y K + E+ + +FD + NVVSWTSL+SGY +N
Sbjct: 126 VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGL 185
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ IH+ M G P T T L A + I G Q+HA +VK E T V N+
Sbjct: 186 NDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNA 245
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y + A F+ + ++ ++W +IG G ++G + F +M G++ +
Sbjct: 246 LICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLS 305
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ +C L Q+H +K GY +R ++M Y KC VDEA KLF
Sbjct: 306 RTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFS 365
Query: 336 --GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
+H N+VTW AMI G Q +N +A+ +F +++ G++P+ +T+S+
Sbjct: 366 MADAAH-NVVTWTAMIGGFVQ-----------NNNNKKAVDLFCQMSREGVRPNHFTYST 413
Query: 394 ILT-ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+L S L++ Q+HA +K + V TAL++ Y K G + ++RVF + +
Sbjct: 414 VLAGKPSSLLS-----QLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAK 468
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+++W++M+TG A S +A+++F ++ GV+PN+ TF + ACS++ E
Sbjct: 469 DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Query: 513 EMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+K + +C L+ M+ + G IE A + + E + V W+ I G
Sbjct: 529 HAT----AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYG 583
Query: 569 RHGN 572
+HG+
Sbjct: 584 QHGD 587
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 228/469 (48%), Gaps = 26/469 (5%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A ++FD P ++ + L+ + +N+ A+H+F D+ +G +TL AL C
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L +G+Q+H +K +D SVG SL +Y F+ + KNV+SWT++
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ NG + + ++M EG+ PN FT ++ + G QVH++ +K G+
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
V N+++ +YLK +V +A+ +FD M + VTWN MI G+A +
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAI-----------G 285
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
E +F ++ +G+K F + L +CS+ L +Q+H +K G+ + T
Sbjct: 286 FYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT 345
Query: 428 ALVNMYKKCGRIERASRVF-VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+ Y KC ++ A ++F + + +++WT+MI GF ++ + +A+ LF M GVR
Sbjct: 346 ALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVR 405
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
PN T+ LA ++ + + + ++++ Y+ P + L+D +V+ G + E+
Sbjct: 406 PNHFTYSTVLAGKPSSLL---SQLHAQIIKAYYEKVPSVA--TALLDAYVKTGNVVESAR 460
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
F I D V WS + G + + E QL+K +KP +
Sbjct: 461 VFYSIPAKDI----VAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNE 505
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 201/388 (51%), Gaps = 18/388 (4%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GFQ + G K+ + + + L+ C ++ L+ + +H +VK G + T L+
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349
Query: 118 VYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
Y KC +++EA K+F NVV+WT++I G+VQN+ + A+ +F M G P +
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T T L S L Q+HA ++K E SV +L Y G++ + + F I
Sbjct: 410 TYSTVLAGKPS----SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSI 465
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-GTMLSLRVG 295
K++++W+ ++ + ++ + + F +++ EG++PNE+T +S+ + C + ++ G
Sbjct: 466 PAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHG 525
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H+ +K G ++ L V ++++ +Y K G ++ A+K+F ++V+WN+MI G+ Q
Sbjct: 526 KQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQ- 584
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H +AL +F + + G+ D TF +LT C+ +E+GE+ + +
Sbjct: 585 ----------HGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMI 634
Query: 416 KTGFLSDVVVG-TALVNMYKKCGRIERA 442
K + + +V++Y + G ++A
Sbjct: 635 KDYHIDKKXEHYSCMVDLYSRAGMFDKA 662
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/758 (32%), Positives = 394/758 (51%), Gaps = 58/758 (7%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
+ LI N P +L F + ++ +LL+ C + L +HA++
Sbjct: 22 NSLIAKNATQNPQTALTFFTRMQ--AHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79
Query: 102 KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR--INVVSWTSLISGYVQNSQPELA 159
+ G D F LV+ YGKCG+ A +VFD +P ++VVSWT+LIS Y N + A
Sbjct: 80 RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEA 139
Query: 160 IHVFLDMLEAGNYPTN-------VTLGTALTACS---SLESIRLGKQIHAYVVKYQTEDD 209
F M + + V+LG ++AC+ +R G +H VVKY
Sbjct: 140 FKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVS 199
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
T +GNS+ +YS C + A + FN I +++V+SW ++I NGEA + LR F M
Sbjct: 200 THLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDM 259
Query: 268 LSEG---IQPNEFTLTSISSVCGTMLSLRVGAQVH----SLGIKLGYASNLRVRNSIMYL 320
+SEG ++PN T+ ++ C + + + VH S L A ++ V +++ +
Sbjct: 260 VSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDM 319
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
+ +CG + A+++FDG+ N+V W+AMIAG+ Q + EAL +F ++
Sbjct: 320 HARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQ-----------GSCPEEALRLFRQML 368
Query: 381 SSG------MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
G +KP+ T S++ CSRL A IH + TG D + +AL++M
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCA 428
Query: 435 KCGRIERASRVFVEM--STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
KCG IE +VF EM STRT++SW+SMI H +AL+LF +M G PN++T+
Sbjct: 429 KCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITY 488
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+ L+ACS+AG+V + F M+K+Y + P HY CL+D+ R G ++EA + I M
Sbjct: 489 ISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMP 548
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+ + +W +A C HGN +LG +++L L + +L +++ AGRW+DV
Sbjct: 549 IKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVR 608
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA-KCFGYKQ 671
++ R L + S+I I ++VYSF D HP+S I+K LD L E+ K Y
Sbjct: 609 MRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVT 668
Query: 672 QESFELTDEESASV-----YHSEKLAIAFGLL----------NTPIVSPILVVKSTTMCR 716
+ + D + A + YHSE+LAIAFGL+ + +PI + K+ +CR
Sbjct: 669 ETGLNVEDGDIAGLILRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCR 728
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH + K+++ + RE+IVRD+ R H F +G C+C D+
Sbjct: 729 DCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDY 766
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/683 (33%), Positives = 373/683 (54%), Gaps = 22/683 (3%)
Query: 78 VSLLQECVNRKSLSNAEII-HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+S L +C+ S + ++ H ++VK G V L++ Y K ++ A VFD +P
Sbjct: 413 LSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMP 472
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ +SW S+ISG N AI +F+ M G+ + TL + L AC+ +G+
Sbjct: 473 HQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRV 532
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG- 255
+H Y VK +TS+ N+L +YS C +S + F + +KNV+SWT +I + G
Sbjct: 533 VHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGL 592
Query: 256 -EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ V GL +M+ +GI+P+ F +TS+ SL+ G VH I+ G L V
Sbjct: 593 FDKVAGL--LQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N++M +Y+ C ++EA+ +FD +++ ++++WN +I G+++ +N E+ S
Sbjct: 651 NALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSR-----------NNFANESFS 699
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+FS + KP+ T + IL + + +LE+G +IHA L+ GFL D ALV+MY
Sbjct: 700 LFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYV 758
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + A +F ++ + LISWT MI G+ H A+ LFE M +GV P+ +F
Sbjct: 759 KCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSA 818
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC ++G+ E +F M+KEYKI+P + HY C++D+ G ++EAF+FI+ M E
Sbjct: 819 ILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIE 878
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ IW + GCR H +++L A+++ KL+P++ Y +L +I+ A RWE V +K
Sbjct: 879 PDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLK 938
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
N L E SWI ++ KV+ F ++ HP+ I + LD + + + G+ ++
Sbjct: 939 NKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKK 998
Query: 675 FELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
+ L + A HS KLA+ FG+L+ P PI V K++ +C CH K I+ +
Sbjct: 999 YSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSHCHEAAKFISKMC 1058
Query: 730 AREIIVRDSKRLHKFVNGHCTCR 752
REII+RDS R H F G C+CR
Sbjct: 1059 NREIILRDSSRFHHFEGGRCSCR 1081
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 250/520 (48%), Gaps = 34/520 (6%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG---------SHQDFFVMTFLVN 117
+EG ++ + + +S+L C +++H + +K+G S D + + LV
Sbjct: 292 SEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVF 351
Query: 118 VYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y KCG+M A++VFD +P + NV W ++ GY + ++ E ++ +F M E G P
Sbjct: 352 MYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEH 411
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
L L + L R G H Y+VK +V N+L S Y+ +++A+ F+R+
Sbjct: 412 ALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRM 471
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++ +SW +VI C NG + + F +M +G + + TL S+ C VG
Sbjct: 472 PHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGR 531
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
VH +K G + N+++ +Y C ++F M+ N+V+W AMI + +
Sbjct: 532 VVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAG 591
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
K + ++ G+KPD++ +S+L + +L+QG+ +H ++
Sbjct: 592 LFDK-----------VAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIR 640
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G + V AL+ MY C +E A VF ++ + +ISW ++I G++ ++ ++++ L
Sbjct: 641 NGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSL 700
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDM 534
F DMLL +PN VT L A ++ + E+ + + D Y L+DM
Sbjct: 701 FSDMLLQ-FKPNTVTMTCILPAVASISSLERGR---EIHAYALRRGFLEDSYTSNALVDM 756
Query: 535 FVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+V+ G + A FD + K N + W++ IAG HG
Sbjct: 757 YVKCGALLVARVLFDRLTK----KNLISWTIMIAGYGMHG 792
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 221/454 (48%), Gaps = 24/454 (5%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVNVYG 120
AL +L V SY +++Q C +SL A HA + TG + LV Y
Sbjct: 82 ALRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYL 141
Query: 121 KCGNMEEAQKVFDNLP-RI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
KCG++ A+ VFD +P R+ +V WTSL+S Y + + + +F M G P +
Sbjct: 142 KCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAV 201
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L +SL SI G+ IH + K + +V N+L +LYS CG + A++ F+ +
Sbjct: 202 SCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHA 261
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++ +SW + I NG + + FSKM SEG + + T+ S+ C + VG V
Sbjct: 262 RDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVV 321
Query: 299 HSLGIKLGYASNLRVRNS---------IMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAM 348
H +K G +L S ++++Y+KCG + A+++FD M S N+ WN +
Sbjct: 322 HGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLI 381
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+ G+A+ + E+L +F +++ G+ PD + S +L + L G
Sbjct: 382 MGGYAKAAEF-----------EESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGL 430
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
H +K GF + V AL++ Y K I+ A VF M + ISW S+I+G ++
Sbjct: 431 VAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNG 490
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
L+ +A++LF M + G + T + L AC+ +
Sbjct: 491 LNSEAIELFVRMWMQGHELDSTTLLSVLPACARS 524
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 120/222 (54%), Gaps = 1/222 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ +G K + S+L +SL + +H + ++ G + V L+ +Y C N
Sbjct: 603 MVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRN 662
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
MEEA+ VFD++ +++SW +LI GY +N+ + +F DML P VT+ L A
Sbjct: 663 MEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDMLLQFK-PNTVTMTCILPA 721
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+S+ S+ G++IHAY ++ +D+ N+L +Y CG+L A F+R+ +KN++SW
Sbjct: 722 VASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISW 781
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
T +I G +G + F +M G++P+ + ++I C
Sbjct: 782 TIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYAC 823
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 157/346 (45%), Gaps = 28/346 (8%)
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+ G+ LR G++ + ++ +CG SL + H+L ++ G +
Sbjct: 75 QAGDLAAALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAARRAHAL-VRAGTGGIIG 129
Query: 313 --VRNSIMYLYLKCGLVDEAQKLFDGMSH--VNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ ++ YLKCG + A+ +FD M ++ W ++++ +A+ D
Sbjct: 130 SVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDF---------- 179
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
E +S+F ++ G+ PD + S +L + L ++ +GE IH L K G V A
Sbjct: 180 -QEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANA 238
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+ +Y +CG +E A +VF M R ISW S I+G+ ++ +A+ LF M G +
Sbjct: 239 LIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEIS 298
Query: 489 QVTFVGALAACSNAG--MVYEALGYFEM----MQKEYKIKPVMDHYMC--LIDMFVRLGC 540
VT + L AC+ G +V + + + M + ++ +D + L+ M+V+ G
Sbjct: 299 SVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGD 358
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+ A M + N +W++ + G + E EQ+ +L
Sbjct: 359 MGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHEL 404
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K T + +L + SL IHA+ ++ G +D + LV++Y KCG + A+
Sbjct: 709 KPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARV 768
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD L + N++SWT +I+GY + + A+ +F M +G P + L AC
Sbjct: 769 LFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGL 828
Query: 191 IRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVI 248
G K +A +Y+ E + L S G+L A + + E + W +++
Sbjct: 829 TAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLL 888
Query: 249 GAC 251
C
Sbjct: 889 HGC 891
>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/763 (31%), Positives = 402/763 (52%), Gaps = 60/763 (7%)
Query: 35 VSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAE 94
VSY S +LN +E ++ L F+ +S G + S+V++L C+ L
Sbjct: 169 VSYSALISSFSKLNRETEAIQ-LFFRMRIS----GIEPNEYSFVAILTACIRSLELEMGL 223
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+HA +K G Q FV L+ +YGKCG ++ A +FD +P+ ++ SW ++IS V+
Sbjct: 224 QVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSLVKGL 283
Query: 155 QPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
E A+ +F + + + + TL T LTAC+ + G++IHAY ++ E++ SV
Sbjct: 284 SYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENNLSVS 343
Query: 214 NSLCSLYSTCGSLNS-------------------------------AIKAFNRIREKNVM 242
N++ Y+ CGSLN A+ FN++ EKN +
Sbjct: 344 NAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPEKNSV 403
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
S+ ++ +N E ++ L F +M+ EG + +FTLT + + CG +L L + Q+H
Sbjct: 404 SYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQIHGFI 463
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMMDLAK 360
IK G+ SN + +++ + KCG +D+A ++F +S N + +MI G+A+
Sbjct: 464 IKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYAR------ 517
Query: 361 DDLSAHNG-GTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
NG EA+ +F + S G M D F+SIL +C L E G+QIH LKTG
Sbjct: 518 ------NGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTG 571
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F +++ VG ++++MY KC I+ A + F M ++SW +I G H +AL ++
Sbjct: 572 FHAELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWS 631
Query: 479 DMLLAGVRPNQVTFVGALAA--CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
M AG++P+ +TFV ++A +++ ++ E F M+ + ++P +HY L+ +
Sbjct: 632 SMEKAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLG 691
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
G +EEA + I KM F+P +W + GCR H N +G A+ ++ ++P+D +Y +
Sbjct: 692 YWGLLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVL 751
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
+ +++ ++GRW +V+ R+ L + SW+ IK ++++F D HPQS +I+
Sbjct: 752 VSNLYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSG 811
Query: 657 LDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKS 711
LD L+ K GY+ SF L + E YHS KLA +GLL T PI VVK+
Sbjct: 812 LDILILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKN 871
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+CRDCH F+K T +T REII RD+ H F NG C+C+ +
Sbjct: 872 ILLCRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGY 914
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 265/552 (48%), Gaps = 48/552 (8%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
++ +LL+ V + A +HA I+K G +D + ++ Y K G + +A +V
Sbjct: 102 IEVDDLFNLLRLSVKYTDIDLARALHASILKLG--EDTHLGNAVIAAYIKLGLVVDAYEV 159
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + +VVS+++LIS + + ++ AI +F M +G P + LTAC +
Sbjct: 160 FMGMSTPDVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLEL 219
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+G Q+HA +K V N+L LY CG L+ AI F+ + ++++ SW T+I +
Sbjct: 220 EMGLQVHALAIKLGYSQLVFVANALIGLYGKCGCLDHAIHLFDEMPQRDIASWNTMISSL 279
Query: 252 GENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ + L F + ++G + ++FTL+++ + C + G ++H+ I++G +N
Sbjct: 280 VKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLENN 339
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAKD------- 361
L V N+I+ Y +CG ++ LF+ M +++TW MI + + ++DLA D
Sbjct: 340 LSVSNAIIGFYTRCGSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMFNKMPE 399
Query: 362 -----------DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+N G +AL++F ++ G + +T + ++ C L+ LE QI
Sbjct: 400 KNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLEISRQI 459
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR--TLISWTSMITGFANHS 468
H +K GF S+ + AL++M KCGR++ A R+F +ST I TSMI G+A +
Sbjct: 460 HGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICGYARNG 519
Query: 469 LSHQALQLFEDMLLAGVRP-NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
L +A+ LF G ++V F L C G F + K+ + +
Sbjct: 520 LPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLG--------FHEVGKQIHCQALKTG 571
Query: 528 YMC-------LIDMFVRLGCIEEAFDFIKKMDFEPNE--VIWSVFIAG--CRRHGNMELG 576
+ +I M+ + I++A IK + P V W+ IAG R G+ L
Sbjct: 572 FHAELGVGNSIISMYSKCYNIDDA---IKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALA 628
Query: 577 FYAAEQLLKLKP 588
+++ + +KP
Sbjct: 629 IWSSMEKAGIKP 640
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 235/704 (33%), Positives = 378/704 (53%), Gaps = 25/704 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L C +L+ +H IVK G +D FV L++ YG+CG ++ ++VFD +
Sbjct: 141 TFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKM 200
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
NVVSWTSLI GY + + A+ +F +M+E G P +VT+ ++AC+ L+ ++LG+
Sbjct: 201 SERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGE 260
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+ + + + E + + N+L +Y CG+++ A K F+ +KN++ + T++ G
Sbjct: 261 QVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQG 320
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
A + L +ML G +P+ T+ S S C + + G H ++ G V N
Sbjct: 321 LAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCN 380
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL----------AKDDLSA 365
+I+ +Y+KCG + A ++FD M + V+WN++IAG + D+ DL +
Sbjct: 381 AIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVS 440
Query: 366 HN---GG-------TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
N G EA+ +F + S G+ D T + + C L AL+ + IH
Sbjct: 441 WNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIK 500
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K D+ +GTALV+M+ +CG + A +VF +M R + +WT+ I A A++
Sbjct: 501 KKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIE 560
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF++ML G++P+ V FV L A S+ G+V + F M+ Y I P HY C++D+
Sbjct: 561 LFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLL 620
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G + EA I M EPN+VIW +A CR H N+++ YAAE++ +L P+ +
Sbjct: 621 GRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHV 680
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L +I+ SAGRW+DVA V+ +E+ + S I I K++ F D HP+ I
Sbjct: 681 LLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEP 740
Query: 656 VLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVK 710
+L E+ + + GY + L D E Y HSEKLAIAF L++T PI V K
Sbjct: 741 MLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAK 800
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+F K+++ +REIIVRD+ R H F G C+C D+
Sbjct: 801 NLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCGDY 844
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 271/583 (46%), Gaps = 61/583 (10%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+L Q L +LT+ T S+ ++C K+++ + +H+ I K G + +T L
Sbjct: 19 ALPNQNELKILTKHRSSPTGSF----KKC---KTMTELKQLHSQITKNGLNHHPLSLTNL 71
Query: 116 VNVYGKCG---NMEEAQKVFDNLPRINVVSWT-----SLISGYVQNSQPELAIHVFLDML 167
++ + G ++E AQK + N + T SLI G+ AI VF ++
Sbjct: 72 ISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLM 131
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P N T L+AC+ ++ G Q+H +VK E D V NSL Y CG ++
Sbjct: 132 CMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEID 191
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+ F+++ E+NV+SWT++IG + G + + F +M+ GI+PN T+ + S C
Sbjct: 192 CMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACA 251
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ L++G QV + +L N + N+++ +Y+KCG +D+A+K+FD NLV +N
Sbjct: 252 KLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNT 311
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+++ + + LA+ E L++ ++ G +PD T S ++ CS L + G
Sbjct: 312 IMSNYVR-QGLAR----------EVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCG 360
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
+ H L+ G V A++NMY KCG+ E A RVF M +T +SW S+I GF +
Sbjct: 361 KWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRN 420
Query: 468 -------------------------------SLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
S+ +A++LF M G+ ++VT VG
Sbjct: 421 GDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVA 480
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+AC G + + + K+ I M L+DMF R G + A KM + +
Sbjct: 481 SACGYLGAL-DLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRD 538
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAML 597
W+ I GN +++L+ +KP A+L
Sbjct: 539 VSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALL 581
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 6/199 (3%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA+ + +EG + V + C +L A+ IH +I K H D + T
Sbjct: 454 FKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTA 513
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+++ +CG+ + A +VF+ + + +V +WT+ I AI +F +ML+ G P
Sbjct: 514 LVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPD 573
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
V LTA S + G I + Y + L G L+ A+
Sbjct: 574 GVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLI 633
Query: 234 NRIR-EKNVMSWTTVIGAC 251
N ++ E N + W +++ AC
Sbjct: 634 NSMQMEPNDVIWGSLLAAC 652
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/749 (30%), Positives = 385/749 (51%), Gaps = 89/749 (11%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + + +++T +Y S+LQ C KSL++ + +H+ I D + LV++Y C
Sbjct: 88 LVCMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATC 147
Query: 123 GNMEEAQKVFDNLPRINV------------------------------------------ 140
G+++E ++VFD + + NV
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL 207
Query: 141 ---------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+SW S+ISGYV N E + ++ M+ G T+ + L C++ ++
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H+ +K E + N+L +YS CG L+ A++ F ++ E+NV+SWT++I
Sbjct: 268 SLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+G + +R +M EG++ + TSI C SL G VH SNL
Sbjct: 328 TRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N++M +Y KCG +D A +F M ++++WN MI
Sbjct: 388 FVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE-------------------- 427
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+KPD T + IL C+ L ALE+G++IH L+ G+ SD V ALV+
Sbjct: 428 ------------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG + A +F + ++ L+SWT MI+G+ H ++A+ F +M AG+ P++V+
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVS 535
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G++ + +F +M+ ++ I+P ++HY C++D+ R G + +A++FI+ +
Sbjct: 536 FISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETL 595
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
P+ IW + GCR + ++EL AE++ +L+P++ Y +L +I+ A +WE+V
Sbjct: 596 PIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVK 655
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
++ ++ L + SWI IK KV F N+ HP S +I +L ++ K K GY
Sbjct: 656 RMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYF 715
Query: 671 QQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ + L + +E A HSEKLA+AFGLL P + V K+ +C DCH K +
Sbjct: 716 PKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEMAKFM 775
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ T REI++RDS R H F NG+C+CR F
Sbjct: 776 SKETRREIVLRDSNRFHHFKNGYCSCRGF 804
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/715 (32%), Positives = 384/715 (53%), Gaps = 28/715 (3%)
Query: 49 GNSEPVRSLG-----FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV-K 102
G SE +S G F L + KV S++++L C N ++L IH+ I+ +
Sbjct: 410 GASEDRKSFGKVVNTFHHMLLAGIDPNKV---SFIAILNACSNSEALDFGRKIHSLILTR 466
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAI 160
+ + V T LV++YGKCG++ EA+ VF LP ++V+W ++ Y QN + + A
Sbjct: 467 RRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAF 526
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
++ML+ G P ++ + L++C + Q+ + + +L S++
Sbjct: 527 GALMEMLQGGVLPDALSFTSVLSSCYCSQE----AQVLRMCILESGYRSACLETALISMH 582
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
C L A FN + +V+SWT ++ A EN + + F +M EG+ P++FTL
Sbjct: 583 GRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLA 642
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
+ C +L +G +H+ ++G +++ V N+++ +Y CG EA F+ M
Sbjct: 643 TTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR 702
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+LV+WN M A +AQ LAK EA+ +F ++ G+KPD TFS+ L +
Sbjct: 703 DLVSWNIMSAAYAQA-GLAK----------EAVLLFRQMQLEGVKPDKLTFSTTLNVSGG 751
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ G+ HAL ++G SDV V T LV +Y KCG+++ A +F T++ ++
Sbjct: 752 SALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAI 811
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I A H S +A+++F M GVRP+ T V ++AC +AGMV E F M++ +
Sbjct: 812 IGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFG 871
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
I P ++HY C +D+ R G +E A I+KM FE N ++W+ + C+ G+ ELG A
Sbjct: 872 ISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCA 931
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
+++L+L P + ++ +L +I+ + G+W+D V + +E + SW I +V+ F
Sbjct: 932 QRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEF 991
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE--ESASVYHSEKLAIAFGLL 698
D HP++ EI+ VLD+L + GY+ + ++ DE E A YHSE++AIAFGL+
Sbjct: 992 VAGDRSHPKTDEIYVVLDKLELLMRRAGYEADKGLDVEDELKEKALGYHSERIAIAFGLI 1051
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
TP + + +VK+ +C DCH K I+ + REIIVRDS R H F NG C+C+D
Sbjct: 1052 ATPPETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKD 1106
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 266/528 (50%), Gaps = 40/528 (7%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y +LLQ CV+ L+ + H I G Q F+ L+N+Y +CG++EEA +F +
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGK 195
NVVSWT+LIS Q A +F M LE+ P + TL L AC++ + +G+
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 196 QIHAYVVKYQTEDDTS----VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
IHA + + E ++ VGN++ ++Y+ CGSL AI F I EK+V+SWT + GA
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207
Query: 252 GENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ LR F +ML + + PN T + C SLR G +HSL + +
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLGFD 264
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS---HVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N+++ +Y KCG + A +F M+ ++LV+WNAMI+ + + +
Sbjct: 265 PLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVE---------AGRH 315
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSIL-TICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +A++IF +L GM+P+ T +IL + + V H ++G+L DVV+G
Sbjct: 316 G--DAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIG 373
Query: 427 TALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
A+++MY KCG A VF + + +ISW +M+ + + + F MLLAG+
Sbjct: 374 NAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMM-------QKEYKIKPVMDHYMCLIDMFVRL 538
PN+V+F+ L ACSN+ EAL + + +++Y V L+ M+ +
Sbjct: 434 DPNKVSFIAILNACSNS----EALDFGRKIHSLILTRRRDYVESSVATM---LVSMYGKC 486
Query: 539 GCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLK 585
G I EA K+M ++ W+V + ++ + F A ++L+
Sbjct: 487 GSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 8/165 (4%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
DL ++++L C L +G+ H L G + +G L+NMY +CG +E A +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNA--- 502
+M R ++SWT++I+ A +A LF MLL + PN T V L AC+N+
Sbjct: 84 SKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 503 --GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
G A+ + +++ ++ + M I+M+ + G +E+A
Sbjct: 144 AIGRSIHAMIWELGLERASTTATLVGNAM--INMYAKCGSLEDAI 186
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/710 (30%), Positives = 384/710 (54%), Gaps = 34/710 (4%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF----VMTFLVNVYGKCGNMEEAQ 129
T +SLL+ C +S+ + +H +K G + + VMTF + G+ + A+
Sbjct: 18 THPLISLLETC---ESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCT--HEYGDFQYAR 72
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
++FD +P N+ W ++I GY + P+L + ++L+ML G P T +
Sbjct: 73 RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 132
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ G+Q+H +V+K+ + + V +L +Y CG L++A F+ + +V++W +I
Sbjct: 133 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIIS 192
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A + G+ + R F M + + P TL + S C + LR G +VHS S
Sbjct: 193 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 252
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLAK------- 360
NL + N+++ +Y CG +D A +F M++ ++++W +++G + +D+A+
Sbjct: 253 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 312
Query: 361 -----------DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
D N EAL +F + ++ +KPD +T S+LT C+ L ALE GE
Sbjct: 313 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 372
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
I + +D+ V AL++MY KCG +++A +F EMS R +WT+MI G A +
Sbjct: 373 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 432
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL +F +ML A + P+++T++G L+AC++ G+V + YF M ++ I+P + HY
Sbjct: 433 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 492
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
CL+D+ R G ++EA++ I+ M + N ++W +AGCR + ++ +Q+L+L+P
Sbjct: 493 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 552
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+ Y +L +I+ + RW D+ ++ + ++ + +T S I + +V+ F D HPQ
Sbjct: 553 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQ 612
Query: 650 SAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVS 704
+ I LD++ + K GY S D+E++ HSEKLAIAFGL+N+P
Sbjct: 613 TKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGV 672
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I + K+ MC DCHN K+++ + RE+IVRD R H F +G C+C+D+
Sbjct: 673 TIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDY 722
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 217/440 (49%), Gaps = 44/440 (10%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
LG L +L G K ++ L + +L +H H++K G + FV T LV
Sbjct: 101 LGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 160
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y CG ++ A+ VFD P+ +V++W +IS Y + + E + +FL M + PT V
Sbjct: 161 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV 220
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL L+ACS L+ +R GK++H+YV + E + + N++ +Y+ CG ++SA+ F +
Sbjct: 221 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
Query: 237 REKNVMSWTTVIGACGENGEA-------------------------------VQGLRFFS 265
++++SWTT++ GE + L F
Sbjct: 281 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFR 340
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
M + ++P+EFT+ S+ + C + +L +G + + + ++L VRN+++ +Y KCG
Sbjct: 341 NMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCG 400
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
VD+A+ +F MS + TW AMI G L+ + G +AL +FS + + +
Sbjct: 401 DVDKAESIFREMSQRDKFTWTAMIVG-----------LAVNGHGEKALDMFSNMLKASIL 449
Query: 386 PDLYTFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD T+ +L+ C+ +++G + +T + G ++ LV++ + GR++ A
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509
Query: 445 VFVEMSTR-TLISWTSMITG 463
V M + I W +++ G
Sbjct: 510 VIENMPIKANSIVWGALLAG 529
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/711 (32%), Positives = 390/711 (54%), Gaps = 27/711 (3%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EA+ + L G ++ +L+ C K S IH I + + +V T
Sbjct: 100 YEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTA 159
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y KCG +++A++VFD + + +VV+W S+ISG+ + + L ++ P
Sbjct: 160 LVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPN 219
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T+ L A + + S+R GK+IH + V+ D VG + +Y C ++ A + F+
Sbjct: 220 SSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFD 279
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKML---SEGIQPNEFTLTSISSVCGTML 290
+ KN ++W+ ++GA + L F ++L + I + TL ++ VC +
Sbjct: 280 MMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLT 339
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L G +H IK G+ +L V N+++ +Y KCG+++ A + F+ M + V++ A+I+
Sbjct: 340 DLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIIS 399
Query: 351 GHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G+ Q NG +E L +F ++ SG+ P+ T +S+L C+ L L G
Sbjct: 400 GYVQ------------NGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSC 447
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
H + GF +D ++ AL++MY KCG+I+ A +VF M R ++SW +MI + H +
Sbjct: 448 SHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGI 507
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL LF++M G++P+ VTF+ ++ACS++G+V E +F M +++ I P M+HY
Sbjct: 508 GLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYA 567
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R G +E FI+KM EP+ +W ++ CR + N+ELG ++++ KL P+
Sbjct: 568 CMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPE 627
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HP 648
++ +L +++ + GRW+D A V+ +E+ ++ SWI I V++F HP
Sbjct: 628 STGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHP 687
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIV 703
Q +I LDEL+ + K GY+ + S+ D +E +YHSEKLAIAFG+L+
Sbjct: 688 QLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEEEKERVLLYHSEKLAIAFGILSLSPD 747
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+V K+ +C DCH IK I+ +T R+I VRD+ R H F +G C C DF
Sbjct: 748 KHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDASRFHHFKDGICNCGDF 798
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 205/427 (48%), Gaps = 36/427 (8%)
Query: 182 LTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGN------SLCSLYSTCGSLNSAIKAFN 234
L +C +S+ GK IH +++K +T++ N L LY C L A F+
Sbjct: 16 LESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVFD 75
Query: 235 RI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
++ R KNV+ W +I A NG + + + KML GI PN FT + C +
Sbjct: 76 KMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEA 135
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G ++H +L SN+ V +++ Y KCG +D+A+++FD M ++V WN+MI+G
Sbjct: 136 SEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISG- 194
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
S H G + ++ + + P+ T +L +++ +L G++IH
Sbjct: 195 ----------FSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHG 244
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSH 471
++ GF+ DVVVGT ++++Y KC I+ A R+F M + ++W++M+ +
Sbjct: 245 FCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMR 304
Query: 472 QALQLFEDMLLAG---VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP--VMD 526
+AL+LF +L+ + + VT + C+N + Y IK V+D
Sbjct: 305 EALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTG-----TCLHCYAIKSGFVLD 359
Query: 527 HYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF--YAAEQ 582
+ L+ M+ + G I A F +MD + V ++ I+G ++GN E G + Q
Sbjct: 360 LMVGNTLLSMYAKCGIINGAMRFFNEMDLR-DAVSFTAIISGYVQNGNSEEGLRMFLEMQ 418
Query: 583 LLKLKPK 589
L + P+
Sbjct: 419 LSGINPE 425
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 30 DKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKS 89
D VS+ S +Q NGNSE G + L + G + ++ S+L C +
Sbjct: 387 DLRDAVSFTAIISGYVQ-NGNSEE----GLRMFLEMQLSGINPEKATLASVLPACAHLAG 441
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L H + + G D + L+++Y KCG ++ A+KVFD + + +VSW ++I
Sbjct: 442 LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIA 501
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
Y + A+ +F +M G P +VT ++ACS + GK
Sbjct: 502 YGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 241/718 (33%), Positives = 388/718 (54%), Gaps = 55/718 (7%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDN 134
+SLL C K+L + +IHA ++KTG H + ++ L+ + + A VF+
Sbjct: 6 LSLLHNC---KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ N++ W ++ G+ +S P A+++++ M+ G P T L +C+ ++ R G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN--------------------------- 227
+QIH +V+K + D V SL S+Y G L
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182
Query: 228 ----SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
SA K F+ I K+V+SW +I E G + L F +M+ ++P+E T+ S+
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
S C S+ +G QVHS G+ SNL++ N+++ LY+KCG V+ A LF+G+S+ +++
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI 302
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WN +I G+ M N EAL +F ++ SG P+ T SIL C+ L A
Sbjct: 303 SWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 351
Query: 404 LEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
+E G IH K G + T+L++MY KCG IE A +VF + R+L SW +MI
Sbjct: 352 IEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMI 411
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
GFA H ++ A +F M + P+ +TFVG L+ACS++GM+ F M+++YKI
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKI 471
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
P ++HY C+ID+ G +EA + I M+ EP+ VIW + C+ + N+ELG A+
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQ 531
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
L+K++PK+ SY +L +I+ +AGRW +VA ++ L ++ + + S I I V+ F
Sbjct: 532 NLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFG 696
D HP++ EI+ +L+E+ + G+ S L + +E A +HSEKLAIAFG
Sbjct: 592 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 651
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+C D+
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 709
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 7/285 (2%)
Query: 60 QEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E K S+ VS++ C S+ +H+ I G + ++ L
Sbjct: 217 KEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 276
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG +E A +F+ L +V+SW +LI GY + + A+ +F +ML +G P +
Sbjct: 277 IDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 336
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
VT+ + L AC+ L +I +G+ IH Y+ K + +S SL +Y+ CG + +A + F
Sbjct: 337 VTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVF 396
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ I +++ SW +I +G A FS+M I+P++ T + S C L
Sbjct: 397 DSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 456
Query: 294 VGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + S+ L ++ L GL EA+++ + M
Sbjct: 457 LGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 501
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/710 (32%), Positives = 381/710 (53%), Gaps = 22/710 (3%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+S F +A + E G + +Y++LL C + + HA IVK G H +
Sbjct: 117 KSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHR 176
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L++ Y K G ++ A+++F + + VS+ +I+GY N E AI +F++M G
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLG 236
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P++ T ++A L+ G+QIH +VVK + VGN+ YS +N
Sbjct: 237 FKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVR 296
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
K FN + E + +S+ +I A G+ + + F ++ F ++ S+ + L
Sbjct: 297 KLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSL 356
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L++G Q+H+ + + RV NS++ +Y KCG +EA ++F +S + V W AMI+
Sbjct: 357 DLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMIS 416
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ Q H G L +F ++ + + D TF+ +L + L ++ G+Q+
Sbjct: 417 ANVQR--------GLHENG---LKLFYEMRRANVSADQATFACVLKASANLASILLGKQL 465
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H+ +++GF+ +V G AL++MY C I+ A + F EMS R +++W ++++ +A +
Sbjct: 466 HSCVIRSGFM-NVYSGCALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDG 524
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
L+ FE+M+++G +P+ V+F+ L ACS+ +V E L YF M Y + P +HY
Sbjct: 525 KGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTA 584
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-K 589
++D R G +EA + +M FEP+E++W+ + CR H N L AA QL +K +
Sbjct: 585 MVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLR 644
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D Y + +IF AG+W+ V VK R+ + + +SW+ IK KV+ F ND HPQ
Sbjct: 645 DAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQ 704
Query: 650 SAEIFKVLDELVEKAKCFGYKQQES--FELTDEES---ASVYHSEKLAIAFGLLNTPIVS 704
EI + ++ L E+ + GY S + D+ES + YHSE+LAIAF L+NTP S
Sbjct: 705 QLEILRKIEMLAEQMEKEGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGS 764
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PILV+K+ C DCH IK+I+ + REI VRDS R H F +G C+C D+
Sbjct: 765 PILVMKNLRACTDCHAAIKVISKIVGREITVRDSNRFHHFRDGSCSCGDY 814
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/517 (25%), Positives = 255/517 (49%), Gaps = 30/517 (5%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
TS + ++++ R L A ++ +++ F + +++ Y K GN+ A+++FD
Sbjct: 43 TSRFNFMIKDLSERGQLCQAR----QLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFD 98
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ VV+WT++I Y ++++ A +F +M +G+ P VT T LT C+ LE +
Sbjct: 99 DTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKE 158
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
Q HA +VK + V N+L Y G L+SA + F + + +S+ +I
Sbjct: 159 LYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYAN 218
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG + + F +M + G +P++FT ++ S + G Q+H +K + N+ V
Sbjct: 219 NGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFV 278
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+ + Y K V+E +KLF+ M ++ V++N +I +A + + E++
Sbjct: 279 GNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAWVGKV-----------KESI 327
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F +L + + F ++L+I + + L+ G Q+HA + + D V +LV+MY
Sbjct: 328 DLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMY 387
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG+ E A R+F+ +S+R+ + WT+MI+ L L+LF +M A V +Q TF
Sbjct: 388 AKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFA 447
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM------CLIDMFVRLGCIEEAFDF 547
L A +N + ++ K+ + +M L+DM+ I++A
Sbjct: 448 CVLKASANLASI--------LLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKT 499
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
++M E N V W+ ++ ++G+ + + E+++
Sbjct: 500 FEEMS-ERNVVTWNALLSAYAQNGDGKGTLKSFEEMI 535
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/730 (32%), Positives = 398/730 (54%), Gaps = 26/730 (3%)
Query: 37 YQRSGSKLIQLNGN-SEPVRSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLS 91
+ R G + N S V++ F EAL + ++G + + + V +LQ C L+
Sbjct: 223 WMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLN 282
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
+ +HA ++K G+ + LV +Y +CG ++ A +VF + + +SW S++S YV
Sbjct: 283 HGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIGDKDYISWNSMLSCYV 341
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
QN AI F +M++ G P + + + L+A L + G+++HAY VK + + D
Sbjct: 342 QNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQ 401
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
+ N+L +Y C S+ + + F+R+R K+ +SWTT+I ++ + + F EG
Sbjct: 402 IANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEG 461
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
I+ + + SI C + S+ + QVHS I+ G +L ++N I+ +Y +CG V A
Sbjct: 462 IKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGLL-DLILKNRIIDIYGECGEVCYAL 520
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYT 390
+F+ + ++VTW +M+ + A NG EA+++F K+ ++G++PD
Sbjct: 521 NIFEMLDKKDIVTWTSMV------------NCFAENGLLHEAVALFGKMLNAGIQPDSVA 568
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
IL + L +L +G++IH ++ F + V ++LV+MY CG + A +VF E
Sbjct: 569 LVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAK 628
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+ ++ WT+MI H QA+ +F+ ML GV P+ V+F+ L ACS++ +V E
Sbjct: 629 CKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKF 688
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Y +MM +YK++P +HY C++D+ R G EEA+ FIK M EP V+W + CR H
Sbjct: 689 YLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIH 748
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
N EL A ++LL+L+P + +Y ++ ++F G+W +V ++ E+ L + SW
Sbjct: 749 KNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSW 808
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG-YKQQESFELTD---EESASVY 686
I I + V++F D H S I L E+ EK + G Y + SF L D EE +
Sbjct: 809 IEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLL 868
Query: 687 --HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSE+LAI+FGL++T +P+ + K+ +C DCH F K+++ L REI+VRD+ R H F
Sbjct: 869 HRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHF 928
Query: 745 VNGHCTCRDF 754
G C+C DF
Sbjct: 929 SGGTCSCGDF 938
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 235/470 (50%), Gaps = 21/470 (4%)
Query: 40 SGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAH 99
+G+ L QL + + +L A S P T Y +L R+++S +HAH
Sbjct: 22 AGASLRQLCKDGDLREALRQLAARSARGRAPP-PTDHYGWVLDLVAVRRAVSEGRQLHAH 80
Query: 100 IVKTGSHQD---FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
V TG+ D F+ T L+ +YGKCG + +A ++FD +P V SW +LI + +
Sbjct: 81 AVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGA 140
Query: 157 ELAIHVFLDMLE----AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
A+ V+ M AG P TL + L AC + R G ++H VK + T V
Sbjct: 141 GEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLV 200
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
N+L +Y+ CG L+SA++ F +R+ ++V SW + I C +NG ++ L F +M S+G
Sbjct: 201 ANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDG 260
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
N +T + VC + L G ++H+ +K G N++ N+++ +Y +CG VD A
Sbjct: 261 FSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSAL 319
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
++F + + ++WN+M++ + Q A EA+ F ++ +G PD
Sbjct: 320 RVFREIGDKDYISWNSMLSCYVQNRLYA-----------EAIDFFGEMVQNGFNPDHACI 368
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+L+ L L G ++HA +K SD+ + L++MY KC +E ++RVF M
Sbjct: 369 VSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRI 428
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+ +SWT++I +A S +A+ F G++ + + L ACS
Sbjct: 429 KDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSG 478
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/406 (28%), Positives = 193/406 (47%), Gaps = 32/406 (7%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG---NSLCSLYSTCGSLNSA 229
P G L + ++ G+Q+HA+ V D G L +Y CG L A
Sbjct: 53 PPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDA 112
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE----GIQPNEFTLTSISSV 285
+ F+ + + V SW +IGAC +G A + + + M + G P+ TL S+
Sbjct: 113 HRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKA 172
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVT 344
CG R G++VH L +K G + V N+++ +Y KCGL+D A ++F+ M ++ +
Sbjct: 173 CGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVAS 232
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
WN+ I+G Q NG EAL +F ++ S G + YT +L +C+ L
Sbjct: 233 WNSAISGCVQ------------NGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQ 280
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L G ++HA LK G ++ AL+ MY +CG ++ A RVF E+ + ISW SM++
Sbjct: 281 LNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSC 339
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+ + L +A+ F +M+ G P+ V L+A + G + Y +K
Sbjct: 340 YVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLING-----REVHAYAVKQ 394
Query: 524 VMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+D + L+DM+++ +E + +M + + V W+ IA
Sbjct: 395 RLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIK-DHVSWTTIIA 439
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 249/758 (32%), Positives = 394/758 (51%), Gaps = 58/758 (7%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
+ LI N P +L F + ++ +LL+ C + L +HA++
Sbjct: 22 NSLIAKNATQNPQTALTFFTRMQ--AHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79
Query: 102 KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR--INVVSWTSLISGYVQNSQPELA 159
+ G D F LV+ YGKCG+ A +VFD +P ++VVSWT+LIS Y N + A
Sbjct: 80 RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEA 139
Query: 160 IHVFLDMLEAGNYPTN-------VTLGTALTACS---SLESIRLGKQIHAYVVKYQTEDD 209
F M + + V+LG ++AC+ +R G +H VVKY
Sbjct: 140 FXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVS 199
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
T +GNS+ +YS C + A + FN I +++V+SW ++I NGEA + LR F M
Sbjct: 200 THLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDM 259
Query: 268 LSEG---IQPNEFTLTSISSVCGTMLSLRVGAQVH----SLGIKLGYASNLRVRNSIMYL 320
+SEG ++PN T+ ++ C + + + VH S L A ++ V +++ +
Sbjct: 260 VSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDM 319
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
+ +CG + A+++FDG+ N+V W+AMIAG+ Q + EAL +F ++
Sbjct: 320 HARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQ-----------GSCPEEALRLFRQML 368
Query: 381 SSG------MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
G +KP+ T S++ CSRL A IH + TG D + +AL++M
Sbjct: 369 MEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCA 428
Query: 435 KCGRIERASRVFVEM--STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
KCG IE +VF EM STRT++SW+SMI H +AL+LF +M G PN++T+
Sbjct: 429 KCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITY 488
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+ L+ACS+AG+V + F M+K+Y + P HY CL+D+ R G ++EA + I M
Sbjct: 489 ISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMP 548
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+ + +W +A C HGN +LG +++L L + +L +++ AGRW+DV
Sbjct: 549 IKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVR 608
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA-KCFGYKQ 671
++ R L + S+I I ++VYSF D HP+S I+K LD L E+ K Y
Sbjct: 609 MRVELRRSGLRKIPGQSFIEIGNEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVT 668
Query: 672 QESFELTDEESASV-----YHSEKLAIAFGLL----------NTPIVSPILVVKSTTMCR 716
+ + D + A + YHSE+LAIAFGL+ + +PI + K+ +CR
Sbjct: 669 ETGLNVEDGDIAGLIXRCKYHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCR 728
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH + K+++ + RE+IVRD+ R H F +G C+C D+
Sbjct: 729 DCHAYTKLVSKVIDRELIVRDAHRFHHFRDGFCSCGDY 766
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/686 (33%), Positives = 368/686 (53%), Gaps = 19/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV++L C + +SL + IH I++ G D FV T L+N+Y KCG++ A F L
Sbjct: 107 TYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRL 166
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSWT++I+ VQ+ Q LA ++ M G P +TL T A + GK
Sbjct: 167 EHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGK 226
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++ V E D V NS +++ G L A + F + +++V++W VI +N
Sbjct: 227 FVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNE 286
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ +R F ++ +G++ N+ T + +V ++ SL G +H L + GY + V
Sbjct: 287 NFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVAT 346
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
++M LY +C +A K+F M +++TW M +AQ NG EAL
Sbjct: 347 ALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQ------------NGFRKEALQ 394
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ G +P T ++L C+ L AL++G QIH+ ++ F ++VV TAL+NMY
Sbjct: 395 LFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYG 454
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG++ A VF +M+ R ++ W SM+ +A H + LQLF M L GV+ + V+FV
Sbjct: 455 KCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVS 514
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD-F 553
L+A S++G V + YF M +++ I P + Y C++D+ R G I+EA D + K+
Sbjct: 515 VLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGC 574
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P+ ++W + CR H + AAEQ+L+ P +Y +L +++ +AG W+ V +
Sbjct: 575 LPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRM 634
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L R + + S I I ++V+ F D HP+ I+ LD L + + GY
Sbjct: 635 RKLMRSRGVKKEPGRSSIEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDT 694
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
L D +E YHSE+LAIAFGL++TP +P+ V+K+ +C DCH K I+ L
Sbjct: 695 KMILHDVEDERKEDMLFYHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKL 754
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H F +G C+C+D+
Sbjct: 755 RGREILVRDTHRFHNFKDGRCSCKDY 780
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/502 (30%), Positives = 277/502 (55%), Gaps = 15/502 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K T+ +V+LLQ C + K++ + +H H+ G Q+ V L+ +Y +CG++ EAQ+
Sbjct: 1 KPDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQ 60
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF+ L R +V +WT +I Y Q + A+ +F M E PT VT L AC+S ES
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ G +IH +++ E D VG +L ++Y+ CGS+ A +F R+ ++V+SWT +I A
Sbjct: 121 LKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
C ++ + + +M +G+ PN+ TL ++ + G L G V+ L S+
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+RV NS + ++ GL+ +A++LF+ M ++VTWN +I + Q +
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG----------- 289
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA+ +F +L G+K + TF +L + + L +L +G+ IH L + G+ D VV TAL+
Sbjct: 290 EAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALM 349
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y +C +A ++FV+M ++ +I+WT M +A + +ALQLF++M L G RP
Sbjct: 350 SLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSA 409
Query: 491 TFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
T V L C++ + + + +++ ++++ V++ LI+M+ + G + EA +
Sbjct: 410 TLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVE--TALINMYGKCGKMAEAMSVFE 467
Query: 550 KMDFEPNEVIWSVFIAGCRRHG 571
KM + + ++W+ + +HG
Sbjct: 468 KMA-KRDILVWNSMLGAYAQHG 488
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 136/248 (54%), Gaps = 4/248 (1%)
Query: 54 VRSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++ F EA+ + +G K ++V +L + SL+ ++IH + + G +D
Sbjct: 283 VQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDA 342
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T L+++YG+C +A K+F ++ +V++WT + Y QN + A+ +F +M
Sbjct: 343 VVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLE 402
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G PT+ TL L C+ L +++ G+QIH+++++ + + V +L ++Y CG + A
Sbjct: 403 GRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEA 462
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F ++ +++++ W +++GA ++G + L+ F++M +G++ + + S+ S
Sbjct: 463 MSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHS 522
Query: 290 LSLRVGAQ 297
S+ G Q
Sbjct: 523 GSVTDGYQ 530
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 242/671 (36%), Positives = 383/671 (57%), Gaps = 26/671 (3%)
Query: 72 VQTSSYVSLL----QECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVYGKCGNME 126
+ + SYV LL + V + +HAH+++TG + + + LVN+Y K G +
Sbjct: 380 INSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIA 439
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+A VF+ + + VSW SLISG QN E A F M G+ P+N TL + L++C+
Sbjct: 440 DACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCA 499
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
SL I LG+QIH +K + D SV N+L +LY+ G +K F+ + E + +SW +
Sbjct: 500 SLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNS 559
Query: 247 VIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
VIGA ++ +V Q +++F +M+ G + T +I S ++ V Q+H+L +K
Sbjct: 560 VIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKY 619
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLS 364
+ + + N+++ Y KCG ++E +K+F MS + V+WN+MI+G+ L K
Sbjct: 620 CLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHK---- 675
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
A+ + + G + D +TF++IL+ C+ + LE+G ++HA ++ SDVV
Sbjct: 676 -------AMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 728
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ALV+MY KCGRI+ ASR F M R + SW SMI+G+A H +AL+LF M+L G
Sbjct: 729 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 788
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ VTFVG L+ACS+ G V E +F+ M + Y++ P ++H+ C++D+ R G ++E
Sbjct: 789 QPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 848
Query: 545 FDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
DFI M +PN +IW +V A CR +G N ELG AAE LL+L+P++ +Y +L +++
Sbjct: 849 GDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYA 908
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
S +WEDVA + +E + + SW+ +KD V+ F D LHP+ I+ L EL
Sbjct: 909 SGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNR 968
Query: 663 KAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
K + GY Q + L D E + YHSEK+A+AF L + PI ++K+ +C D
Sbjct: 969 KMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSAL-PIRIMKNLRVCGD 1027
Query: 718 CHNFIKIITSL 728
CH+ I+ +
Sbjct: 1028 CHSAFGYISKI 1038
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 219/429 (51%), Gaps = 30/429 (6%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +H +K G + F+ L+N+Y + G++ AQK+FD + N+V+W LISGY Q
Sbjct: 90 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC--SSLESIRLGKQIHAYVVKYQTEDDT 210
N +P+ A F DM+ AG P + G+AL AC S +LG QIH + K + D
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209
Query: 211 SVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V N L S+Y +C S N A F+ I +N +SW ++I G+AV FS M
Sbjct: 210 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269
Query: 270 EGI----QPNEFTLTS-ISSVCGTM-LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
EG+ +PNE+T S I++ C ++ L V Q+ + K G+ +L V ++++ + +
Sbjct: 270 EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-S 382
GL D+A+ +F+ M N+V+ N ++ G L G A +F ++
Sbjct: 330 FGLTDDAKNIFEQMGVRNVVSMNGLMVG-----------LVKQKQGEAAAKVFHEMKDLV 378
Query: 383 GMKPDLYTFSSILTICSRLVALEQ----GEQIHALTLKTGFLSD--VVVGTALVNMYKKC 436
G+ D Y +L+ S LE+ G ++HA ++TG L+D V +G LVNMY K
Sbjct: 379 GINSDSYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTG-LNDNKVAIGNGLVNMYAKS 435
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I A VF M + +SW S+I+G + S A + F M G P+ T + L
Sbjct: 436 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTL 495
Query: 497 AACSNAGMV 505
++C++ G +
Sbjct: 496 SSCASLGWI 504
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 190/437 (43%), Gaps = 59/437 (13%)
Query: 38 QRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI-- 95
Q S + +I +SE S + L ++ G + +++++L SLS E+
Sbjct: 554 QVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAV---SSLSLHEVSH 610
Query: 96 -IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQN 153
IHA ++K D + L++ YGKCG M E +K+F + + VSW S+ISGY+ N
Sbjct: 611 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 670
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
A+ + M++ G + T T L+AC+S+ ++ G ++HA ++ E D VG
Sbjct: 671 ELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG 730
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
++L +YS CG ++ A + F + +NV SW ++I +G + L+ F++M+ +G
Sbjct: 731 SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 790
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ T + S C + G V+E +
Sbjct: 791 PDHVTFVGVLSACSHV-----------------------------------GFVEEGFEH 815
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F MS V ++ + + M+DL G + + F +NS MKP++ + +
Sbjct: 816 FKSMSEVYRLS--PRVEHFSCMVDLL-----GRAGKLDEVGDF--INSMPMKPNVLIWRT 866
Query: 394 ILTICSRLVA--LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+L C R E G + + L+ + V L NMY + E ++ M
Sbjct: 867 VLGACCRANGRNTELGRRAAEMLLELE-PQNAVNYVLLANMYASGEKWEDVAKARTAMKE 925
Query: 452 RTL-----ISWTSMITG 463
+ SW +M G
Sbjct: 926 AAVKKEAGCSWVTMKDG 942
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 48/257 (18%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF S++ E+ ++H ++K GF+ ++ + L+N+Y + G + A ++F EM
Sbjct: 73 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
S R L++W +I+G+ + +A F DM+ AG PN F AL AC +G L
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192
Query: 510 G-------------------------YFEMMQKEYKIKPVMD--------HYMCLIDMFV 536
G Y + + V D + +I ++
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252
Query: 537 RLGCIEEAFDFIKKMD-------FEPNEVIW-SVFIAGCRRHGNMELGFYAAEQLLKLKP 588
R G A+D M F+PNE + S+ C +++ G EQ+L
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTAC---SSVDFGLCVLEQML---- 305
Query: 589 KDCESYAMLLDIFVSAG 605
E L D++VS+
Sbjct: 306 ARVEKSGFLQDLYVSSA 322
>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 754
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/735 (32%), Positives = 389/735 (52%), Gaps = 88/735 (11%)
Query: 96 IHAHIVKTGSHQD-FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV-------------- 140
+H +++T H +V+ L+ Y + G + A+++FD +P N+
Sbjct: 31 VHCLVLRTLPHPPPTYVLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHAR 90
Query: 141 -----------------VSWTSLISGYVQNSQPELAIHVFLDMLE-------AGNYPTNV 176
VS+ +LI+G+ P A + +L A P+ +
Sbjct: 91 LLPDMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRI 150
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ + A S+L LG+Q+H +++ + L +Y+ G + A + F+ +
Sbjct: 151 TMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEM 210
Query: 237 REKNV-------------------------------MSWTTVIGACGENGEAVQGLRFFS 265
KNV ++WTT++ +NG + L F
Sbjct: 211 VVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFR 270
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M +EG+ +++T SI + CG + + G Q+H+ I+ Y N+ V ++++ +Y KC
Sbjct: 271 RMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCR 330
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGM 384
+ A+ +F M+ N+++W AMI G+ Q NG G EA+ +FS++ + G+
Sbjct: 331 SIRLAEAVFRRMTCKNIISWTAMIVGYGQ------------NGCGEEAVRVFSEMQTDGI 378
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
KP+ +T S+++ C+ L +LE+G Q H + L +G + V +ALV +Y KCG IE A R
Sbjct: 379 KPNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHR 438
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
+F EM +S+T++++G+A + + + LFE MLL GV+PN VTF+G L+ACS +G+
Sbjct: 439 LFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGL 498
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V + YF MQ+++ I + DHY C+ID++ R G ++EA +FI++M P+ + W+ +
Sbjct: 499 VEKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLL 558
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE 624
+ CR G+ME+G +AAE LLK P++ SY +L + S G W +VA+++ R+ ++ +
Sbjct: 559 SACRLRGDMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKK 618
Query: 625 TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS 684
SWI+ K++V+ F +D HP S I++ L L K GYK S L D A
Sbjct: 619 EPGCSWIKYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAE 678
Query: 685 VY-----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
HSEKLAIAFGL+ P PI VVK+ +C DCHN K I+ +T R+I+VRD+
Sbjct: 679 KVHMLSNHSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAV 738
Query: 740 RLHKFVNGHCTCRDF 754
R HKF NG C+C DF
Sbjct: 739 RFHKFSNGICSCGDF 753
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 156/317 (49%), Gaps = 7/317 (2%)
Query: 58 GFQ-EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
G Q EAL V EG + ++ S+L C + + IHA+ ++T + FV
Sbjct: 260 GLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVG 319
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+ LV++Y KC ++ A+ VF + N++SWT++I GY QN E A+ VF +M G
Sbjct: 320 SALVDMYSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIK 379
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P + TLG+ +++C++L S+ G Q H + +V ++L +LY CGS+ A +
Sbjct: 380 PNDFTLGSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRL 439
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + + +S+T ++ + G+A + + F KML +G++PN T + S C +
Sbjct: 440 FDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLV 499
Query: 293 RVG-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIA 350
G + HS+ G ++ LY + G + EA++ M + + W +++
Sbjct: 500 EKGCSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLS 559
Query: 351 GHAQMMDLAKDDLSAHN 367
D+ +A N
Sbjct: 560 ACRLRGDMEIGKWAAEN 576
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/728 (32%), Positives = 380/728 (52%), Gaps = 64/728 (8%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+ + C S+ E HA + TG + FV LV +Y +C ++ +A+KVFD + +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
VVSW S+I Y + +P++A+ +F M E G P N+TL L C+SL + LGKQ+H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ V + + VGN L +Y+ CG ++ A F+ + K+V+SW ++ + G
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 259 QGLRFFSK-----------------------------------MLSEGIQPNEFTLTSIS 283
+R F K MLS GI+PNE TL S+
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 284 SVCGTMLSLRVGAQVHSLGIKL-------GYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
S C ++ +L G ++H IK G+ V N ++ +Y KC VD A+ +FD
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 337 MS--HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL--NSSGMKPDLYTFS 392
+S ++VTW MI G++Q H +AL + S++ +P+ +T S
Sbjct: 433 LSPKERDVVTWTVMIGGYSQ-----------HGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMST 451
L C+ L AL G+QIHA L+ + + V L++MY KCG I A VF M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
+ ++WTS++TG+ H +AL +F++M G + + VT + L ACS++GM+ + + Y
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F M+ + + P +HY CL+D+ R G + A I++M EP V+W F++ CR HG
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
+ELG YAAE++ +L SY +L +++ +AGRW+DV +++L R + + + SW+
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL---TDEESASVY-- 686
+F D HP + EI++VL + +++ K GY + F L DEE +
Sbjct: 722 EGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFE 781
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLA+A+G+L TP + I + K+ +C DCH ++ + +II+RDS R H F N
Sbjct: 782 HSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKN 841
Query: 747 GHCTCRDF 754
G C+C+ +
Sbjct: 842 GSCSCKGY 849
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 152/542 (28%), Positives = 265/542 (48%), Gaps = 46/542 (8%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN--VVSWTS 145
K++S ++IH ++ G + + L++ Y G + A + P + V W S
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
LI Y N +++F M P N T AC + S+R G+ HA +
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ VGN+L ++YS C SL+ A K F+ + +V+SW ++I + + G+ L FS
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 266 KMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+M +E G +P+ TL ++ C ++ + +G Q+H + N+ V N ++ +Y KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM-------------------MDL-----AK 360
G++DEA +F MS ++V+WNAM+AG++Q+ MD+ A
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL----- 415
+ G EAL + ++ SSG+KP+ T S+L+ C+ + AL G++IH +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 416 --KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST--RTLISWTSMITGFANHSLSH 471
K G + +V L++MY KC +++ A +F +S R +++WT MI G++ H ++
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 472 QALQLFEDMLLAG--VRPNQVTFVGALAACSN--AGMVYEALGYFEMMQKEYKIKPVMDH 527
+AL+L +M RPN T AL AC++ A + + + + + ++ + + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLK 585
CLIDM+ + G I +A M NEV W+ + G HG E LG + + +
Sbjct: 518 --CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 586 LK 587
K
Sbjct: 575 FK 576
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 207/429 (48%), Gaps = 59/429 (13%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + V++L C + + S + +H V + Q+ FV LV++Y KCG M+EA
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF------------------------- 163
VF N+ +VVSW ++++GY Q + E A+ +F
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 164 ----------LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE------ 207
ML +G P VTL + L+ C+S+ ++ GK+IH Y +KY +
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 208 -DDTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFF 264
D+ V N L +Y+ C +++A F+ + +E++V++WT +IG ++G+A + L
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 265 SKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLY 321
S+M E Q PN FT++ C ++ +LR+G Q+H+ ++ A L V N ++ +Y
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
KCG + +A+ +FD M N VTW +++ G+ H G EAL IF ++
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM-----------HGYGEEALGIFDEMRR 572
Query: 382 SGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G K D T +L CS ++QG E + + G LV++ + GR+
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 441 RASRVFVEM 449
A R+ EM
Sbjct: 633 AALRLIEEM 641
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 209/431 (48%), Gaps = 75/431 (17%)
Query: 216 LCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
L S Y + G L+ A+ R + V W ++I + G+NG A + L F M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ +T + CG + S+R G H+L + G+ SN+ V N+++ +Y +C + +A+K+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFS 392
FD MS ++V+WN++I +A+ L K + AL +FS++ N G +PD T
Sbjct: 185 FDEMSVWDVVSWNSIIESYAK---LGKPKV--------ALEMFSRMTNEFGCRPDNITLV 233
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++L C+ L G+Q+H + + + ++ VG LV+MY KCG ++ A+ VF MS +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 453 TLISWTSM-----------------------------------ITGFANHSLSHQALQLF 477
++SW +M I+G+A L ++AL +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIK-PV-------MD 526
ML +G++PN+VT + L+ C++ G + M KE Y IK P+ D
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGAL--------MHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 527 HYMC---LIDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQ 582
M LIDM+ + ++ A + + +V+ W+V I G +HG+ A E
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN---KALEL 462
Query: 583 LLKLKPKDCES 593
L ++ +DC++
Sbjct: 463 LSEMFEEDCQT 473
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 240/718 (33%), Positives = 386/718 (53%), Gaps = 55/718 (7%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDN 134
+SLL C K+L + +IHA ++KTG H + ++ L+ + + A VF+
Sbjct: 37 LSLLHNC---KTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ N++ W ++ G+ +S P A+ +++ M+ G P + T L +C+ ++ + G
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR------------------- 235
+QIH +V+K + D V SL S+Y G L A K F+R
Sbjct: 154 QQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASR 213
Query: 236 ------------IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
I K+V+SW +I E G + L F +M+ I+P+E T+ ++
Sbjct: 214 GYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVV 273
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
S C S+ +G QVHS G+ SNL++ NS+M LY KCG ++ A LF+G+ + +++
Sbjct: 274 SACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVI 333
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WN +I G+ M N EAL +F ++ SG +P+ T SIL C+ L A
Sbjct: 334 SWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382
Query: 404 LEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
++ G IH K + + T+L++MY KCG IE A +VF + ++L SW +MI
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
GFA H + A +F M G+ P+ +TFVG L+ACS +GM+ F M ++YKI
Sbjct: 443 FGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKI 502
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
P ++HY C+ID+ G +EA + I M+ EP+ VIW + C+ GN+ELG A+
Sbjct: 503 TPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQ 562
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
L+K++P++ Y +L +I+ +AGRW +VA ++ L ++ + + S I I V+ F
Sbjct: 563 NLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 642 PNDGLHPQSAEIFKVLDE---LVEKAKCFGYKQQESFELTDE--ESASVYHSEKLAIAFG 696
D HP++ EI+ +L+E L+EKA + E+ +E E A +HSEKLAIAFG
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 682
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+C D+
Sbjct: 683 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 59 FQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + E K S+ V+++ C S+ +H+ I G + ++
Sbjct: 247 YKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNS 306
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG +E A +F+ L +V+SW +LI GY + + A+ +F +ML +G P
Sbjct: 307 LMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPN 366
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+VT+ + L AC+ L +I +G+ IH Y+ K + +S+ SL +Y+ CG + +A +
Sbjct: 367 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQV 426
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
FN I K++ SW +I +G A FS+M GI+P++ T + S C L
Sbjct: 427 FNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGML 486
Query: 293 RVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + ++ L ++ L GL EA+++ + M
Sbjct: 487 DLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM 532
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/706 (33%), Positives = 383/706 (54%), Gaps = 20/706 (2%)
Query: 58 GFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
GF+EA + EG +V ++L+ V + IHA K G ++ FV +
Sbjct: 130 GFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGS 189
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L++ Y CG + A+ VFD + + V+WT+++S Y +N PE A++ F M AG P
Sbjct: 190 SLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKP 249
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
L + L A L S LGK IH VK + + VG +L +Y+ CG + A F
Sbjct: 250 NPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVF 309
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
I +V+ W+ +I ++ + Q F +M+ + PNEF+L+ + C + L
Sbjct: 310 EIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLD 369
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G Q+H+L IKLGY S L V N++M +Y KC ++ + ++F + N V+WN +I G+
Sbjct: 370 LGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYC 429
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q A+D ALS+F ++ ++ + TFSS+L C+ +++ QIH+L
Sbjct: 430 QS-GFAED----------ALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSL 478
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
K+ F +D +V +L++ Y KCG I A +VF + ++SW ++I+G+A H + A
Sbjct: 479 IEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDA 538
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L+LF M + +PN VTFV L+ C + G+V + L F M +++IKP MDHY C++
Sbjct: 539 LELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVR 598
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G + +A FI + P+ ++W ++ C H N+ LG ++AE++L+++P+D +
Sbjct: 599 LLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIEPQDETT 658
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +L +++ +AG + VA+++ R + + SW+ IK +V++F HP I
Sbjct: 659 YVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGSADHPDMRII 718
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILV 708
+L+ L KA GY + L D EE A + HSE+LA+A+GL TP PI +
Sbjct: 719 NAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSERLALAYGLSMTPPGHPIRI 778
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+ C DCH K+I+ + REI+VRD R H F G C+C D+
Sbjct: 779 MKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICSCGDY 824
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 266/534 (49%), Gaps = 21/534 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCGNMEE 127
PK+ + + LLQ C+ R +HA +V+ G + D F L+N+Y K G +
Sbjct: 43 PKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAA 102
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD +P N+VS+ +L+ GY E A +F + G+ + L T L +
Sbjct: 103 ARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVA 162
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+++ L IHA K + + VG+SL YS CG+++ A F+ I K+ ++WT +
Sbjct: 163 MDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAM 222
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ EN L FSKM G +PN F LTS+ + S +G +H +K
Sbjct: 223 VSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLC 282
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V +++ +Y KCG +++A+ +F+ + H +++ W+ +I+ +AQ S N
Sbjct: 283 DTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQ---------SYQN 333
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+A +F ++ S + P+ ++ S +L C+ + L+ G+QIH L +K G+ S++ VG
Sbjct: 334 --EQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGN 391
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+++Y KC +E + +F + +SW ++I G+ + AL +F++M A V
Sbjct: 392 ALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLS 451
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAF 545
QVTF L AC+N + + +++K D +C LID + + GCI +A
Sbjct: 452 TQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNN---DTIVCNSLIDTYAKCGCIRDAL 508
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAML 597
+ + + + V W+ I+G HG ++ K KP D A+L
Sbjct: 509 KVFESI-IQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALL 561
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/585 (38%), Positives = 337/585 (57%), Gaps = 21/585 (3%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T ++AC L+SIR K++ Y++ + D + N + ++ CG + A + F+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKM---LSEGIQPNEFTLTSISSVCGTMLSLR 293
EKN++SW T+IG + G+ + R F M S+ T+ S+ G + +
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLGLIFA-- 250
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+HS +K G ++ V +++ +Y KCG +++AQ +FD M V WN++IAG+A
Sbjct: 251 -GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA 309
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
H EALS++ ++ SG+K D +TFS I+ IC+RL +LE +Q HA
Sbjct: 310 -----------LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAG 358
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
++ GF D+V TALV++Y K GRIE A VF M + +ISW ++I G+ NH +A
Sbjct: 359 LVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEA 418
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
+++FE ML G+ PN VTF+ L+ACS +G+ FE M +++KIKP HY C+I+
Sbjct: 419 VEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIE 478
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G ++EAF IK F+P +W+ + CR H N ELG +AAE+L + P+ +
Sbjct: 479 LLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSN 538
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +LL+I+ +GR E+ A V + L SWI IK + Y F D H QS EI
Sbjct: 539 YVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISGDKCHAQSKEI 598
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD----EESASVYHSEKLAIAFGLLNTPIVSPILVV 709
++ LDEL+ + GY Q F L D EE +YHSEKLAIAFGL+NT +P+ +V
Sbjct: 599 YQKLDELMLEISKHGYVPQXKFLLPDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIV 658
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+S +C DCH+ IK+I +T REI+VRD+ R H F +G C+C D+
Sbjct: 659 QSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDY 703
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 247/511 (48%), Gaps = 42/511 (8%)
Query: 15 ETKSRQPSSSLATLKDKNHTVSYQRSGSKL-----IQLNGNSEPVRSLGFQEALSVLTEG 69
ET+ R+PSS L +K V ++R L ++LNG +
Sbjct: 88 ETQLRKPSSELCGQIEK--LVFFKRYHEALELFEILELNGAYD----------------- 128
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
+ + +Y +L+ C+ KS+ + + +++ +G D ++ ++ ++ KCG M +A+
Sbjct: 129 --MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDAR 186
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
++FD +P N++SW ++I G V A +FL M + + + T + A + L
Sbjct: 187 RLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRASAGLG 246
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
I G+Q+H+ +K D V +L +YS CGS+ A F+++ EK + W ++I
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIA 306
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+G + + L + +M G++ + FT + I +C + SL Q H+ ++ G+
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ +++ LY K G +++A+ +FD M H N+++WNA+IAG+ H G
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGN-----------HGRG 415
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTA 428
EA+ +F ++ GM P+ TF ++L+ CS ++G +I +++ +
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYAC 475
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++ + + G ++ A + + + ++ W +++T H + L F L G+ P
Sbjct: 476 MIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVH--KNFELGKFAAEKLYGMGP 533
Query: 488 NQVT-FVGALAACSNAGMVYEALGYFEMMQK 517
+++ +V L + +G + EA + +++
Sbjct: 534 EKLSNYVVLLNIYNXSGRLEEAAAVIQTLKR 564
>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
Length = 847
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/696 (34%), Positives = 379/696 (54%), Gaps = 23/696 (3%)
Query: 69 GPKVQTSSYV-SLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNME 126
P T+ ++ SLLQ C L ++HA +V +G+ F+ L+ +Y C ++
Sbjct: 164 APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 223
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A ++F +PR N VSWT+L+SG QN A+ F M AG PT L +A A +
Sbjct: 224 SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAA 283
Query: 187 SLESIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+L + + A V + TE V ++L +YS CG L+ A + F+++ +K+ ++WT
Sbjct: 284 ALGAPLRARSCTASASVGFDTE--LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWT 341
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +NG + F M EG + ++ S+ S G + + +H K
Sbjct: 342 AMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTK 401
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFD-GMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
G+ + VRN+++ +Y K V+ A ++ N+V+ +MI G+ +
Sbjct: 402 AGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIET-------- 453
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ EAL I+ +L G++P+ +TFSS++ C+ LEQG Q+HA +KT + D
Sbjct: 454 ---DCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDS 510
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VG+ LV+MY KCG I + ++F E+ RT I+W ++I FA H +A+Q F+ M+ +
Sbjct: 511 FVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYS 570
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+RPN + FV L ACS+AG+V E L YF M++ + I+P +HY C+ID + R G ++E
Sbjct: 571 GIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDE 630
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+ FI +M +PN W + CR G+ ELG AA+ L+KL+P + + L I+ S
Sbjct: 631 AYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYAS 690
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
G+WEDV V+ L R+ ++ + +SW+ K + F D HPQ +I++ L+EL +
Sbjct: 691 LGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTR 750
Query: 664 AKCFGYKQQESF-----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GY SF E +E YHSE++A+AF L++ P PI+V K+ +C DC
Sbjct: 751 IKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDC 810
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K I + R+IIVRD+ R H FVNG C+C D+
Sbjct: 811 HTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDY 846
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 157/634 (24%), Positives = 269/634 (42%), Gaps = 110/634 (17%)
Query: 69 GPKVQTSSYV-SLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNME 126
P T+ ++ SLLQ C L ++HA +V +G+ F+ L+ +Y C ++
Sbjct: 14 APAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLA 73
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQN--------------------------------- 153
A ++F +PR N VSWT+L+SG QN
Sbjct: 74 SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTL 133
Query: 154 ------------SQPELAIHVFLDMLEAGNYP---TNVTLGTALTACSSLESIRLGKQIH 198
S P L + + L P T V L + L +C +R G+ +H
Sbjct: 134 GPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLH 193
Query: 199 A-YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
A V+ T + N L ++YS C L SA++ F + +N +SWTT++ +N
Sbjct: 194 ARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMH 253
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
L F+ M G+ P F L+S + + + + +G+ + L V +++
Sbjct: 254 ADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNL 312
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI-F 376
+Y KCGL+ EA ++FD M + V W AMI G+A+ NG EA + F
Sbjct: 313 ADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK------------NGSLEAAVLSF 360
Query: 377 SKLNSSGM-KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
+ G+ D + F S+L+ L + IH K GF +V V AL++MY K
Sbjct: 361 RDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAK 420
Query: 436 CGRIERASRVF-VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
+E ASRV ++ ++S TSMI G+ +AL ++ ++ GV PN+ TF
Sbjct: 421 SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSS 480
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIE---------- 542
+ C+ ++ + ++ + K + D ++ L+DM+ + G I
Sbjct: 481 MIKGCAMQALLEQGA---QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIE 537
Query: 543 ------------------------EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG-- 576
+AFD + PN + + + C G ++ G
Sbjct: 538 YRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLK 597
Query: 577 -FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
FY+ ++ ++PK+ E Y+ ++D + AGR ++
Sbjct: 598 YFYSMKEAHGIEPKE-EHYSCIIDTYGRAGRLDE 630
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E G + ++ S+++ C + L +HA ++KT +D FV + L
Sbjct: 457 EEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTL 516
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++YGKCG + + ++F+ + ++W ++I+ + Q+ AI F M+ +G P +
Sbjct: 517 VDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNH 576
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ + LTACS + G K ++ + E + + Y G L+ A K +
Sbjct: 577 IAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFIS 636
Query: 235 RIREK-NVMSWTTVIGACGENG 255
+ K N W +++GAC G
Sbjct: 637 EMPIKPNAYGWCSLLGACRMRG 658
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/695 (34%), Positives = 370/695 (53%), Gaps = 21/695 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + V++L C + IH VK G ++ V +V +Y KCG + E
Sbjct: 242 EGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNE 301
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTAC 185
AQ F NVVSW ++IS + A ++ +M G VT+ L AC
Sbjct: 302 AQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPAC 361
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+R K++H Y ++ + + N+ Y+ CG+LNSA K F+ I +K V SW
Sbjct: 362 LDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWN 420
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+IG +NG+ + L +M G QP+ FT++S+ C + SL+ G ++H ++
Sbjct: 421 ALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRN 480
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G ++ V S++ Y+ CG A+ LFD M NLV+WNAMI+G++Q
Sbjct: 481 GLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQ----------- 529
Query: 366 HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG E+L++F K S G++ S+ CS+L AL G++ H LK D
Sbjct: 530 -NGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAF 588
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG ++++MY K G I+ + +VF + + + SW ++I H +A++L+E M G
Sbjct: 589 VGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVG 648
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P++ T++G L AC +AG+V E L YF+ MQ I+P ++HY CLIDM R G +++A
Sbjct: 649 QMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDA 708
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ +M E + IWS + CR G +E+G A++LL+L+P E+Y +L +++
Sbjct: 709 LRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGL 768
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
G+W+ V V+ + +E L + SWI + +VYSF D L P+SAEI + L E+
Sbjct: 769 GKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERI 828
Query: 665 KCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
GYK S E+ +EE + HSEKLAI+FGLL T + + + K+ +C DCH
Sbjct: 829 SEIGYKPNTSSVLHEVGEEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCH 888
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
N K+I+ REI+VRD+KR H F +G C+C D+
Sbjct: 889 NAAKLISKAVEREIVVRDNKRFHHFRDGLCSCCDY 923
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 176/599 (29%), Positives = 295/599 (49%), Gaps = 66/599 (11%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+++ C + E+IH ++K G D FV LV +YGKCG ++EA KVFD +
Sbjct: 148 TFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFM 207
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLG 194
P N+VSW S+I + +N + + ++ML E G P VT+ T L C+ + +G
Sbjct: 208 PETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIG 267
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
IH VK ++ V N++ +YS CG LN A +F + KNV+SW T+I A
Sbjct: 268 MGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLE 327
Query: 255 GEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G+ + +M +G ++ NE T+ ++ C L LR ++H + + ++
Sbjct: 328 GDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVE 386
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ N+ + Y KCG ++ A+K+F G+ + +WNA+I GHAQ D K A
Sbjct: 387 LSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRK-----------A 435
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L + ++ SG +PD +T SS+L C+ L +L+ G++IH L+ G +D VGT+L++
Sbjct: 436 LHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSH 495
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y CG+ A +F M + L+SW +MI+G++ + L +++L LF L G++ +++
Sbjct: 496 YIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAI 555
Query: 493 VGALAACSNAGMVY---EALGY-FEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA-- 544
V ACS + EA GY + +Q E D ++ +IDM+ + GCI+E+
Sbjct: 556 VSVFGACSQLSALRLGKEAHGYVLKALQTE-------DAFVGCSIIDMYAKSGCIKESRK 608
Query: 545 --------------------------------FDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++ +KK+ P+ + + C G
Sbjct: 609 VFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGL 668
Query: 573 MELG--FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+E G ++ Q L E YA L+D+ AGR +D + N EE ++ WS
Sbjct: 669 VEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEE--ADNRIWS 725
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 228/427 (53%), Gaps = 17/427 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ C N+K + +H + + +++ +V+ T L+ +Y CG+ +++ VFDN+
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N++ W +L+SGY +N + VF+D++ ++ P N T + + AC + +RLG+ I
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H V+K D VGN+L +Y CG+++ A+K F+ + E N++SW ++I A ENG +
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 258 VQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ML EG+ P+ T+ +I VC + +G +H L +KLG + + V N+
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++Y+Y KCG ++EAQ F ++ N+V+WN MI+ + D+ EA ++
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDV-----------NEAFNLL 337
Query: 377 SKLNSSG--MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
++ G MK + T ++L C + L +++H + + F V + A + Y
Sbjct: 338 QEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF-QHVELSNAFILAYA 396
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + A +VF + +T+ SW ++I G A + +AL L M +G +P+ T
Sbjct: 397 KCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISS 456
Query: 495 ALAACSN 501
L AC++
Sbjct: 457 LLLACAH 463
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 173/327 (52%), Gaps = 14/327 (4%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+G L AC + + I G+++H +V +D + L +Y+ CGS + F+
Sbjct: 45 AIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDN 104
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRV 294
+ KN++ W ++ NG ++ F ++S+ QP+ FT S+ CG +L +R+
Sbjct: 105 METKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRL 164
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H + IK+G ++ V N+++ +Y KCG VDEA K+FD M NLV+WN+MI ++
Sbjct: 165 GEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSE 224
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++D + L G+ PD+ T +IL +C+ ++ G IH L
Sbjct: 225 -NGFSRDSFDL---------LMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLA 274
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K G +V+V A+V MY KCG + A FV+ + + ++SW +MI+ F+ ++A
Sbjct: 275 VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAF 334
Query: 475 QLFEDMLLAG--VRPNQVTFVGALAAC 499
L ++M + G ++ N+VT + L AC
Sbjct: 335 NLLQEMQIQGEEMKANEVTILNVLPAC 361
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 149/303 (49%), Gaps = 20/303 (6%)
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNS-IMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
CG + G ++H + N V N+ ++ +Y CG +++ +FD M NL+
Sbjct: 53 CGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQ 112
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLV 402
WNA+++G+ + NG + + +F L S + +PD +TF S++ C ++
Sbjct: 113 WNALVSGYTR------------NGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGIL 160
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+ GE IH + +K G + DV VG ALV MY KCG ++ A +VF M L+SW SMI
Sbjct: 161 DVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMIC 220
Query: 463 GFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
F+ + S + L +ML G+ P+ VT V L C+ G V +G + K
Sbjct: 221 AFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLS 280
Query: 522 KPVMDHYMCLIDMFVRLGCIEEA-FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
+ VM + ++ M+ + G + EA F+K + N V W+ I+ G++ F
Sbjct: 281 EEVMVNN-AMVYMYSKCGYLNEAQMSFVKNNN--KNVVSWNTMISAFSLEGDVNEAFNLL 337
Query: 581 EQL 583
+++
Sbjct: 338 QEM 340
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 12/252 (4%)
Query: 28 LKDKNHTVSYQRSGSKLIQLNGNSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVN 86
+KDKN VS+ S Q N P SL F+++LS EG + + VS+ C
Sbjct: 512 MKDKN-LVSWNAMISGYSQ---NGLPYESLALFRKSLS---EGIQSHEIAIVSVFGACSQ 564
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
+L + H +++K +D FV ++++Y K G ++E++KVFD L NV SW ++
Sbjct: 565 LSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAI 624
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ- 205
I + + + AI ++ M + G P T L AC + G + + +
Sbjct: 625 IVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNL 684
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFF 264
E L + + G L+ A++ N + E + W++++ +C G G +
Sbjct: 685 IEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVA 744
Query: 265 SKMLSEGIQPNE 276
K+L ++P++
Sbjct: 745 KKLLE--LEPDK 754
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/694 (33%), Positives = 382/694 (55%), Gaps = 22/694 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ S+L ++ + + +HA +K G FV L+N+Y KCG +EE
Sbjct: 151 EGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEE 210
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF + ++VSW +L++G V N + A+ +F D + T T T + C++
Sbjct: 211 ARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCAN 270
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTT 246
L+ + L +Q+H+ V+K+ +V +L Y+ G L+ A+ F + +NV+SWT
Sbjct: 271 LKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTA 330
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I C +NG+ FS+M +G+ PN+ T ++I +V ++ AQV IK
Sbjct: 331 MIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQV----IKTN 386
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
Y V ++M Y K +EA +F + ++V+W+AM+ +AQ D
Sbjct: 387 YECTPTVGTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDC-------- 438
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGEQIHALTLKTGFLSDVVV 425
NG T A F K+ G+KP+ +T SS + C+ A ++ G Q HA+++K + V
Sbjct: 439 NGATNA---FIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCV 495
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+ALV+MY + G IE A VF + R L+SW SM++G+A H S +AL +F M + G+
Sbjct: 496 SSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGI 555
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+ +TF+ + C++AG+V E YF++M ++Y I P MDHY C++D++ R G ++E
Sbjct: 556 DMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETM 615
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
I+ M F IW + CR H N+ELG AAE+LL L+P D +Y +L +I+ +AG
Sbjct: 616 SLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAG 675
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+W++ V+ L +K+ + SWI+IK+KV+ F +D HP S +I+ L + K K
Sbjct: 676 KWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLK 735
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY SF D +E+ HSE+LA+AFGL+ TP +P+ + K+ + D H
Sbjct: 736 QEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALAFGLIATPPAAPLHIFKNLRVSGDGHT 795
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+++ + REI++RD R H F +G C+C DF
Sbjct: 796 VMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDF 829
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 251/506 (49%), Gaps = 18/506 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNME 126
+G V + + +++ C + + +HA V+ G H D V T LV++Y ++
Sbjct: 49 QGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVL 108
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+ +KVF+ + + NVV+WTSL++GY+Q + +F M G +P T + L+ +
Sbjct: 109 DGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVA 168
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
S + LG+ +HA +K+ V NSL ++Y+ CG + A F R+ ++++SW T
Sbjct: 169 SQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNT 228
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ NG ++ L+ F S E T +++ ++C + L + Q+HS +K G
Sbjct: 229 LMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHG 288
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ S V ++M Y K G +D+A +F MS N+V+W AMI G Q D+
Sbjct: 289 FHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPL----- 343
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
A ++FS++ G+ P+ T+S+ILT+ QIHA +KT + V
Sbjct: 344 ------AAALFSRMREDGVAPNDLTYSTILTVSEASFP----PQIHAQVIKTNYECTPTV 393
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
GTAL+ Y K E A +F + + ++SW++M+T +A + A F M + G+
Sbjct: 394 GTALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGL 453
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+PN+ T A+ AC++ + F + +++ + L+ M+ R G IE A
Sbjct: 454 KPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA- 512
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + + + + W+ ++G +HG
Sbjct: 513 QCVFERQTDRDLLSWNSMLSGYAQHG 538
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 158/302 (52%), Gaps = 19/302 (6%)
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
L I +CG++ +G Q+H+L ++ G+ ++RV S++ +Y+ V + +K+F+GM
Sbjct: 58 LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM 117
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
N+VTW +++ G+ Q L + +S+F ++ + G+ P+ +TFSS+L++
Sbjct: 118 LKRNVVTWTSLLTGYIQAGVL-----------LDVMSLFFRMRAEGVWPNPFTFSSVLSM 166
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
+ ++ G+ +HA ++K G S V V +L+NMY KCG +E A VF M TR ++SW
Sbjct: 167 VASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSW 226
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+++ G + +ALQLF D + + T+ + C+N + LG +
Sbjct: 227 NTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCAN----LKHLGLARQLHS 282
Query: 518 ---EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
++ + L+D + + G +++A D M N V W+ I GC ++G++
Sbjct: 283 SVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIP 342
Query: 575 LG 576
L
Sbjct: 343 LA 344
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/670 (34%), Positives = 366/670 (54%), Gaps = 30/670 (4%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-P 173
+ VY G+++ A+ +FD +P+ ++ +WT LIS ++ + AI + D P
Sbjct: 17 FIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEP 76
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ L + AC+SL + K++H +++ D +GN+L +Y C A F
Sbjct: 77 DKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVF 136
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ ++V+SWT++ G + L F KM G +PN T++SI C + L+
Sbjct: 137 EGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLK 196
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH- 352
G +VH ++ G N+ V ++++ +Y C + +AQ +FD MS + V+WN +I +
Sbjct: 197 SGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYF 256
Query: 353 ------------AQMMD----LAKDDLSA------HNGGTE-ALSIFSKLNSSGMKPDLY 389
+MM L +A NG TE AL + S++ +SG KP+
Sbjct: 257 LNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQI 316
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T +S+L C+ L +L G+QIH + F D+ TALV MY KCG +E + RVF M
Sbjct: 317 TITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMM 376
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ R +SW +MI + H +AL LF +M+ +GVRPN VTF G L+ CS++ +V E L
Sbjct: 377 TKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGL 436
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F+ M +++ ++P DH+ C++D+ R G +EEA++FIKKM EP W + GCR
Sbjct: 437 LIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRV 496
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+ N+ELG AA +L +++ + +Y +L +I VSA W + + + L R+ +++ S
Sbjct: 497 YKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESASVY 686
WI+++++V++F D + QS EI++ LD + EK + GY F L D EE V
Sbjct: 557 WIQVRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVL 616
Query: 687 --HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSEKLA+AFG+LN S I V K+ +C DCHN IK + + +IIVRDS R H F
Sbjct: 617 CNHSEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHF 676
Query: 745 VNGHCTCRDF 754
+G C+C+DF
Sbjct: 677 RDGLCSCQDF 686
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 208/423 (49%), Gaps = 48/423 (11%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+S+ + C + + + NA+ +H ++ G D + L+++YGKC E A+ VF+ +P
Sbjct: 82 LSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF 141
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+V+SWTS+ S YV A+ F M G P +VT+ + L AC+ L+ ++ G+++
Sbjct: 142 RDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREV 201
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK------------------ 239
H +VV+ + V ++L ++Y++C S+ A F+ + +
Sbjct: 202 HGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKEC 261
Query: 240 -----------------NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
N SW VIG C +NG + L S+M + G +PN+ T+TS+
Sbjct: 262 EKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSV 321
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
C + SLR G Q+H + + +L +++++Y KCG ++ ++++F M+ +
Sbjct: 322 LPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDT 381
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WN MI S H G EAL +F ++ SG++P+ TF+ +L+ CS
Sbjct: 382 VSWNTMIIA-----------TSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430
Query: 403 ALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSM 460
+++G I +++ D + +V++ + GR+E A +M T +W ++
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490
Query: 461 ITG 463
+ G
Sbjct: 491 LGG 493
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 39/267 (14%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EAL + G + + + S+L C + K L + +H +V+ G + FV +
Sbjct: 160 LREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSA 219
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY------------------------ 150
LVN+Y C ++ +AQ VFD++ R + VSW LI+ Y
Sbjct: 220 LVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLN 279
Query: 151 -----------VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+QN + E A+ V M +G P +T+ + L AC++LES+R GKQIH
Sbjct: 280 YASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHG 339
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+ ++ D + +L +Y+ CG L + + F+ + +++ +SW T+I A +G +
Sbjct: 340 YIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEE 399
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVC 286
L F +M+ G++PN T T + S C
Sbjct: 400 ALLLFREMVDSGVRPNSVTFTGVLSGC 426
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++AL VL+ G K + S+L C N +SL + IH +I + QD T L
Sbjct: 297 EKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTAL 356
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +Y KCG++E +++VF + + + VSW ++I + E A+ +F +M+++G P +
Sbjct: 357 VFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNS 416
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT L+ CS + G I + + + E D + + + S G L A +
Sbjct: 417 VTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIK 476
Query: 235 RIR-EKNVMSWTTVIGAC 251
++ E +W ++G C
Sbjct: 477 KMPIEPTAGAWGALLGGC 494
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/686 (33%), Positives = 377/686 (54%), Gaps = 22/686 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
Y ++L C + ++L + IH+ I T G D + L+ +Y KCG++E+A+++F+ +
Sbjct: 124 YTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERM 183
Query: 136 P-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
R +V SW ++I+ Y Q+ E AI ++ DM P+ T + L+ACS+L + G
Sbjct: 184 SGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQG 240
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
++IHA + TE D S+ N+L ++Y+ C L+ A K F R+ ++V+SW+ +I A E
Sbjct: 241 RKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAET 300
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + F+SKM EG++PN +T S+ C ++ LR G VH + GY L
Sbjct: 301 DLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNG 360
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ LY G +DEA+ LFD + + + W +I G+++ H G L
Sbjct: 361 TALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQ---------GHRTGV--LE 409
Query: 375 IFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++ ++ N++ + +S +++ C+ L A Q H+ G +SD V+ T+LVNMY
Sbjct: 410 LYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATSLVNMY 469
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+ G +E A +VF +MS+R ++WT++I G+A H AL L+++M L G P+++TF+
Sbjct: 470 SRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFM 529
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L ACS+AG+ + F +Q +Y + P + HY C+ID+ R G + +A + I M
Sbjct: 530 VVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPV 589
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EPN+V WS + R H +++ +AA Q+ KL P D SY +L ++ G +A V
Sbjct: 590 EPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLAGMASV 649
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+N + + SWI + D+++ F D HP+ EIF L L K K GY +
Sbjct: 650 RNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAGYVPES 709
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
L D +E HSEKLAIAFGL+ T + + + + +C DCH+ +K I+++
Sbjct: 710 EEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVKFISAI 769
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRDS R HKF +G C+C D+
Sbjct: 770 ARREIIVRDSSRFHKFRDGQCSCGDY 795
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/544 (28%), Positives = 271/544 (49%), Gaps = 31/544 (5%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSS-YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
P + FQ L G + +S Y L++C + L + IH I S + F+
Sbjct: 7 PAKVRRFQ--LKEEKAGSRFDSSGHYRDALRQC---QDLESVRQIHDRISGAAS-ANVFL 60
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+V YGKCG++ A+ FD + R N SW S+++ Y QN A+ ++ M
Sbjct: 61 GNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNGHYRAALDLYKRM---DL 117
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAI 230
P V T L AC+S+E++ GK IH+ + + + D + NSL ++Y+ CGSL A
Sbjct: 118 QPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGSLEDAK 177
Query: 231 KAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F R+ ++V SW +I A ++G + +R + M ++P+ T TS+ S C +
Sbjct: 178 RLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFTSVLSACSNL 234
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G ++H+L G +L ++N+++ +Y +C +D+A K+F + ++V+W+AMI
Sbjct: 235 GLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMI 294
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
A A+ DL EA+ +SK+ G++P+ YTF+S+L C+ + L G
Sbjct: 295 AAFAE-TDLFD----------EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 343
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H L G+ +V GTALV++Y G ++ A +F ++ R WT +I G++
Sbjct: 344 VHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGH 403
Query: 470 SHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L+L+ +M V ++ + ++AC++ G +A ++ + I +
Sbjct: 404 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFV-LA 462
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKL 586
L++M+ R G +E A KM + + W+ IAG +HG + LG Y +L
Sbjct: 463 TSLVNMYSRWGNLESARQVFDKMS-SRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGA 521
Query: 587 KPKD 590
+P +
Sbjct: 522 EPSE 525
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 200/410 (48%), Gaps = 21/410 (5%)
Query: 59 FQEALSVLTE---GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
F+EA+ + + P V+T + S+L C N L IHA I G+ D + L
Sbjct: 205 FEEAIRLYEDMDVEPSVRT--FTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNAL 262
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +C +++A K+F LPR +VVSW+++I+ + + + AI + M G P
Sbjct: 263 LTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNY 322
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T + L AC+S+ +R G+ +H ++ + G +L LY++ GSL+ A F++
Sbjct: 323 YTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQ 382
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRV 294
I ++ WT +IG + G L + +M + P + + + S C ++ +
Sbjct: 383 IENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFAD 442
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
Q HS G S+ + S++ +Y + G ++ A+++FD MS + + W +IAG+A+
Sbjct: 443 ARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAK 502
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
H AL ++ ++ G +P TF +L CS EQG+Q+ ++
Sbjct: 503 -----------HGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLF-IS 550
Query: 415 LKTGFL--SDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMI 461
+++ + ++ + ++++ + GR+ A + M ++W+S++
Sbjct: 551 IQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLL 600
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/685 (32%), Positives = 374/685 (54%), Gaps = 23/685 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V +LQ C L+ +HA ++K+GS + LV +Y KCG ++ A +VF +
Sbjct: 270 VGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLV-MYTKCGRVDSALRVFREIDE 328
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+ +SW S++S YVQN AI +ML G P + + + +A L + GK++
Sbjct: 329 KDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEV 388
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HAY +K + + DT VGN+L +Y C + + F+R+R K+ +SWTT+I ++
Sbjct: 389 HAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRH 448
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
++ L F + EGI+ + + SI C + ++ + Q+H I+ G +L V+N I
Sbjct: 449 IEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL-DLVVKNRI 507
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSI 375
+ +Y +CG V + K+F+ + ++VTW +MI +A N G EAL +
Sbjct: 508 IDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYA-------------NSGLLNEALVL 554
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F+++ S+ ++PD SIL L +L +G+++H ++ F + + ++LV+MY
Sbjct: 555 FAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSG 614
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG + A +VF + + ++ WT+MI H QA+ LF+ ML GV P+ V+F+
Sbjct: 615 CGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLAL 674
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L ACS++ +V E Y +MM Y+++P +HY C++D+ R G EEA++FIK M +P
Sbjct: 675 LYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKP 734
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
V+W + CR H N EL AA +LL+L+P + +Y ++ ++F G+W + V+
Sbjct: 735 KSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRA 794
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES- 674
E L + SWI I + V++F D H + I L E+ E+ + G +++
Sbjct: 795 RISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTR 854
Query: 675 ---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
++++EE V HSE+LAI+FGL+NT P+ + K+ +C DCH F K+++ L
Sbjct: 855 SVLHDVSEEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLF 914
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R+I+VRD+ R H F G C+C DF
Sbjct: 915 DRDIVVRDANRFHHFSGGSCSCGDF 939
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 232/452 (51%), Gaps = 23/452 (5%)
Query: 59 FQEALSVLTE---GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ--DFFVMT 113
++AL +LT G Y +L +K+++ +HAH V TGS + D F+ T
Sbjct: 40 LRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLAT 99
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM---LEAG 170
L+ +YGKCG + +A+ +FD + V SW +LI Y+ + A+ V+ M +G
Sbjct: 100 KLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASG 159
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P TL + L A R G ++H VK+ + T V N+L ++Y+ CG L+SA+
Sbjct: 160 VAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAM 219
Query: 231 KAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F + + ++V SW ++I C +NG +Q L F M + N +T + VC +
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTEL 279
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L +G ++H+ +K G N++ N+++ +Y KCG VD A ++F + + ++WN+M+
Sbjct: 280 AQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSML 338
Query: 350 AGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+ + Q NG EA+ S++ G +PD S+ + L L G+
Sbjct: 339 SCYVQ------------NGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGK 386
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
++HA +K SD VG L++MY KC IE ++ VF M + ISWT++IT +A S
Sbjct: 387 EVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSS 446
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
+AL++F + G++ + + L ACS
Sbjct: 447 RHIEALEIFREAQKEGIKVDPMMIGSILEACS 478
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/438 (28%), Positives = 211/438 (48%), Gaps = 42/438 (9%)
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT--EDDTSVGNSLCSLYSTCGSLN 227
G P G L ++ +++ G Q+HA+ V + DD + L +Y CG +
Sbjct: 53 GRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVA 112
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM---LSEGIQPNEFTLTSISS 284
A F+ + + V SW +IGA +G A + L + M + G+ P+ TL S+
Sbjct: 113 DARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLK 172
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLV 343
G R G +VH L +K G + V N+++ +Y KCG++D A ++F+ M ++
Sbjct: 173 ASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVA 232
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
+WN+MI+G Q NG +AL +F + + + + YT +L +C+ L
Sbjct: 233 SWNSMISGCLQ------------NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELA 280
Query: 403 ALEQGEQIHALTLKTGFLSDV-VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
L G ++HA LK+G S+V + AL+ MY KCGR++ A RVF E+ + ISW SM+
Sbjct: 281 QLNLGRELHAALLKSG--SEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSML 338
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE--- 518
+ + + L +A++ +ML G +P+ V +A + G + KE
Sbjct: 339 SCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNG--------KEVHA 390
Query: 519 YKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI---AGCRRH- 570
Y IK +D L+DM+++ IE + +M + + + W+ I A RH
Sbjct: 391 YAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIK-DHISWTTIITCYAQSSRHI 449
Query: 571 GNMELGFYAAEQLLKLKP 588
+E+ A ++ +K+ P
Sbjct: 450 EALEIFREAQKEGIKVDP 467
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/705 (33%), Positives = 382/705 (54%), Gaps = 52/705 (7%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
S+ +IHA ++KTG H + ++ L+ + + A VF+ + N++ W ++
Sbjct: 1 SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
G+ +S P A+++++ M+ G P T L +C+ ++ R G+QIH +V+K +
Sbjct: 61 RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 208 DDTSVGNSLCSLYSTCGSLN-------------------------------SAIKAFNRI 236
D V SL S+Y G L SA K F+ I
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
K+V+SW +I E G + L F +M+ ++P+E T+ S+ S C S+ +G
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 240
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
QVHS G+ SNL++ N+++ LY+KCG V+ A LF+G+S+ ++++WN +I G+ M
Sbjct: 241 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHM- 299
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
N EAL +F ++ SG P+ T SIL C+ L A+E G IH K
Sbjct: 300 ----------NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINK 349
Query: 417 --TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
G + T+L++MY KCG IE A +VF + R+L SW +MI GFA H ++ A
Sbjct: 350 RLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAF 409
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+F M + P+ +TFVG L+ACS++GM+ F M+++YKI P ++HY C+ID+
Sbjct: 410 DIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDL 469
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
G +EA + I M+ EP+ VIW + C+ HGN+ELG A+ L+K++PK+ SY
Sbjct: 470 LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSY 529
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ +AGRW +VA ++ L ++ + + S I I V+ F D HP++ EI+
Sbjct: 530 VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 589
Query: 655 KVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVV 709
+L+E+ + G+ S L + +E A +HSEKLAIAFGL++T + + +V
Sbjct: 590 GMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 649
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +CR+CH K+I+ + REII RD R H F +G C+C D+
Sbjct: 650 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 694
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 191/394 (48%), Gaps = 46/394 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S+PV +L + L P T + LL+ C K+ + IH H++K G D
Sbjct: 66 SSDPVSALYLYVCMISLGLLPNCYTFPF--LLKSCAKSKAFREGQQIHGHVLKLGYDLDL 123
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL----------------------- 146
+V T L+++Y + G +E+A+KVFD +VVS+T+L
Sbjct: 124 YVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK 183
Query: 147 --------ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
ISGY + + A+ +F +M++ P T+ + ++AC+ SI LG+Q+H
Sbjct: 184 DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVH 243
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L LY CG + +A F + K+V+SW T+IG
Sbjct: 244 SWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYK 303
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL--GYASNLRVRNS 316
+ L F +ML G PN+ T+ SI C + ++ +G +H K G A+ R S
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG ++ AQ++FD + + +L +WNAMI G A H A IF
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAM-----------HGRANAAFDIF 412
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
S++ + ++PD TF +L+ CS L+ G I
Sbjct: 413 SRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 446
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%), Gaps = 7/285 (2%)
Query: 60 QEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E K S+ VS++ C S+ +H+ I G + ++ L
Sbjct: 202 KEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNAL 261
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG +E A +F+ L +V+SW +LI GY + + A+ +F +ML +G P +
Sbjct: 262 IDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 321
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
VT+ + L AC+ L +I +G+ IH Y+ K + +S SL +Y+ CG + +A + F
Sbjct: 322 VTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVF 381
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ I +++ SW +I +G A FS+M I+P++ T + S C L
Sbjct: 382 DSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLD 441
Query: 294 VGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + S+ L ++ L GL EA+++ + M
Sbjct: 442 LGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 486
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 244/718 (33%), Positives = 389/718 (54%), Gaps = 55/718 (7%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---AQKVFDN 134
+SLL C K+L + IIHA ++KTG H + ++ L+ N + A VF+
Sbjct: 6 LSLLHNC---KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFET 62
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ N++ W ++ G+ +S P AI +++ M+ G P + T L +C+ L+ + G
Sbjct: 63 IQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEG 122
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLY-------------------------------STC 223
+QIH +V+K E D V SL S+Y ++
Sbjct: 123 QQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASR 182
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G + SA K F+ I K+V+SW +I + G + L F +M+ ++P+E T+ ++
Sbjct: 183 GYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVV 242
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
S C S+++G QVHS G SNL++ N+++ LY KCG V+ A LF G+S+ +++
Sbjct: 243 SACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVI 302
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WN MI G+ + N EAL +F ++ SG P+ T SIL C++L A
Sbjct: 303 SWNTMIGGYTHL-----------NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGA 351
Query: 404 LEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
++ G IH K G + + T+L++MY KCG IE A +VF M RTL + +MI
Sbjct: 352 IDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMI 411
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
GFA H ++ A +F M G+ P+ +TFVG L+ACS++GM+ F M + YKI
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKI 471
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
P ++HY C+ID+ LG +EA + I M EP+ VIW + C+ HGN+ELG A+
Sbjct: 472 TPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQ 531
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
+L+K++P++ SY +L +I+ +AGRW +VA ++ L ++ + + S I I V+ F
Sbjct: 532 KLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE-----SASVYHSEKLAIAFG 696
D HP++ EI+ +L+E+ + G+ S L + E A +HSEKLAIAFG
Sbjct: 592 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFG 651
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+C D+
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 709
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 7/286 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E K S+ V+++ C S+ +H+ I G + ++ L
Sbjct: 217 KEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNAL 276
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG +E A +F L +V+SW ++I GY + + A+ +F +ML +G P +
Sbjct: 277 IDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENPND 336
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
VT+ + L AC+ L +I G+ IH Y+ K + +S+ SL +Y+ CG + +A + F
Sbjct: 337 VTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVF 396
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
N + + + + +I +G A FS+M GI+P++ T + S C L
Sbjct: 397 NSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLD 456
Query: 294 VGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+G ++ S+ L ++ L GL EA+++ + M+
Sbjct: 457 LGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT 502
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/705 (31%), Positives = 385/705 (54%), Gaps = 46/705 (6%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
R+L + +++ + P T + SLL C + +L N + H++ +K G D V
Sbjct: 335 RALALFKKMNLDCQKPDCVTVA--SLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGS 392
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KC +++ A + F L G + N + +F M G P
Sbjct: 393 LLDLYVKCSDIKTAHEFF-------------LCYGQLDNLNK--SFQIFTQMQIEGIVPN 437
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T + L C++L + LG+QIH V+K + + V + L +Y+ G L+ A+K F
Sbjct: 438 QFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFR 497
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R++E +V+SWT +I ++ + + L F +M +GI+ + S S C + +L
Sbjct: 498 RLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQ 557
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ GY+ +L + N+++ LY +CG V EA FD + + V+WN++++G AQ
Sbjct: 558 GRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQ 617
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
EAL+IF+++N +G++ + +TF S ++ + + + G+QIH +
Sbjct: 618 SGYF-----------EEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMI 666
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
KTG+ S+ V AL+ +Y KCG I+ ISW SMITG++ H +AL
Sbjct: 667 RKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEAL 713
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LFEDM V PN VTFVG L+ACS+ G+V E + YF M + + + P +HY C++D+
Sbjct: 714 KLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDL 773
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G + A F+++M +P+ ++W ++ C H N+++G +AA LL+L+PKD +Y
Sbjct: 774 LGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATY 833
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
++ +++ +G+W+ + + ++ + + SW+ + + V++F D HP++ I+
Sbjct: 834 VLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIY 893
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEE-----SASVYHSEKLAIAFGLLNTPIVSPILVV 709
+ L L +A GY + + L+D E + HSE+LAIAFGLL+ +P+ V
Sbjct: 894 EYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLSLTSSTPLYVF 953
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCHN+IK ++ +T R IIVRDS R H F G C+C+D+
Sbjct: 954 KNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDY 998
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/514 (28%), Positives = 262/514 (50%), Gaps = 49/514 (9%)
Query: 65 VLTEGPKVQTSSYVSLLQECV-NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+LT+ + + +L+ C N S E IHA + +G F+ L+++Y K G
Sbjct: 154 MLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNG 213
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ A+KVF+NL + VSW ++ISG QN E A+ +F ++ L+
Sbjct: 214 FLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LS 259
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ +E GKQ+H V+K +T V N+L +LYS G+L+SA + F+ + +++ +S
Sbjct: 260 ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS 319
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+ ++I + G + L F KM + +P+ T+ S+ S C ++ +L G Q HS I
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G S++ V S++ LY+KC + A + F + Q+ +L K
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNK--- 421
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ IF+++ G+ P+ +T+ SIL C+ L A + GEQIH LKTGF +V
Sbjct: 422 --------SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNV 473
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V + L++MY K G+++ A ++F + ++SWT+MI G+ H +AL LF++M
Sbjct: 474 YVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQ 533
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGC 540
G++ + + F A++AC AG+ +AL + + + D L+ ++ R G
Sbjct: 534 GIKSDNIGFASAISAC--AGI--QALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGK 589
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ EA+ ++ + + V W+ ++G + G E
Sbjct: 590 VREAYAAFDQI-YAKDNVSWNSLVSGFAQSGYFE 622
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/687 (32%), Positives = 381/687 (55%), Gaps = 22/687 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S Y SL+ ++ L IHA ++ G F++T L++ G++ A++VFD+
Sbjct: 22 SFYASLIDSSTHKAQLRQ---IHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDD 78
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
LPR V W ++I GY +N+ + A+ ++ M A P + T L AC L +++G
Sbjct: 79 LPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMG 138
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTTVIGACG 252
+ +HA V + E D V N L +LY+ C L A F + E+ ++SWT ++ A
Sbjct: 139 RFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NGE V+ L FS+M ++P+ L S+ + + L G +H+ +K+G +
Sbjct: 199 QNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPD 258
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ S+ +Y KCG V A+ LFD M NL+ WNAMI+G+A+ AKD A
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN-GFAKD----------A 307
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F ++ + ++PD + +S ++ C+++ +LEQ + ++ + DV + +AL++M
Sbjct: 308 IDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDM 367
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
+ KCG +E A VF R ++ W++MI G+ H + +A+ L+ M GV PN VTF
Sbjct: 368 FAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTF 427
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+G L AC+++GMV E +F M ++KI P HY C+ID+ R G +++A++ IK M
Sbjct: 428 LGLLIACNHSGMVREGWWFFNRM-ADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP 486
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+P +W ++ C++H ++ELG YAA+QL + P + Y L +++ +A W+ VA
Sbjct: 487 VQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAE 546
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--- 669
V+ +E+ L++ SW+ ++ ++ F+ D HP+ EI + ++ + + K G+
Sbjct: 547 VRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGGFVAN 606
Query: 670 KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
K +L DEE+ HSE++ IA+GL++TP + + + K+ C +CH K+I+
Sbjct: 607 KDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATKLISK 666
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
L REI+VRD+ R H F +G C+C D+
Sbjct: 667 LVGREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 220/471 (46%), Gaps = 20/471 (4%)
Query: 55 RSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ FQ+AL + ++ + S ++ LL+ C L +HA + + G D F
Sbjct: 96 RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KC + A+ VF+ LP +VSWT+++S Y QN +P A+ +F M +
Sbjct: 156 VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P V L + L A + L+ + G+ IHA V+K E + + SL ++Y+ CG + +
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVAT 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F++++ N++ W +I +NG A + F +M+++ ++P+ ++TS S C
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQ 335
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ SL + + Y ++ + ++++ ++ KCG V+ A+ +FD ++V W+AM
Sbjct: 336 VGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAM 395
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+ H EA+S++ + G+ P+ TF +L C+ + +G
Sbjct: 396 IVGYG-----------LHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGW 444
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
++++ + G +++A V M + ++ W ++++ H
Sbjct: 445 WFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
H L + L + P+ L+ A +++ + + KE
Sbjct: 505 --RHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/715 (32%), Positives = 381/715 (53%), Gaps = 30/715 (4%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK--CGN 124
T P + + +SL++ C KS++ + IH+ + TG + V ++ K G+
Sbjct: 12 THLPSLPQTPPLSLIKTC---KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGD 68
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
ME A+ VFD +P N W ++I GY + P A+ ++ +MLE G P T L
Sbjct: 69 MEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKR 128
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ +++ G+++H ++VK + V N+L LYS G ++ A F+R + +V++W
Sbjct: 129 FTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTW 188
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I + + + ++ F +M + P+ TL S+ S C + L VG +VH
Sbjct: 189 NVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKD 248
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLAK-- 360
L + N+++ +Y CG +D A +FD M ++++W A++ G + + LA+
Sbjct: 249 LKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNY 308
Query: 361 ----------------DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
D N E LS+F ++ ++ +KPD +T SILT C+ L AL
Sbjct: 309 FDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGAL 368
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
E GE I A K D VG AL++MY CG +E+A R+F M R ISWT++I G
Sbjct: 369 ELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGL 428
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A + +AL +F ML A + P++VT +G L AC+++GMV + +F M ++ I+P
Sbjct: 429 AINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPN 488
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+ HY C++D+ R G ++EA + IK M +PN ++W + CR H + E+ AA+Q+L
Sbjct: 489 VAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQIL 548
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+L+P++ Y +L +I+ + RWE + V+ L + + +T S I + V+ F D
Sbjct: 549 ELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGD 608
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
+HPQS EI+ LDE+ K GY S D +ESA HSEKLAIAFGL++
Sbjct: 609 QVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLIS 668
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I +VK+ MC DCH K+++ + RE+IVRD R H F +G C+C+D+
Sbjct: 669 SGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDY 723
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 216/436 (49%), Gaps = 44/436 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G +Y LL+ ++ +H HIVK G + FV L+++Y G
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE 169
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ A+ VFD + +VV+W +ISGY ++ Q + ++ +F +M P+++TL + L+A
Sbjct: 170 VSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSA 229
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS L+ + +GK++H YV + E + N+L +Y+ CG +++A+ F+ ++ ++V+SW
Sbjct: 230 CSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISW 289
Query: 245 TTVIGA---CGENGEA------------------VQG----------LRFFSKMLSEGIQ 273
T ++ G+ G A + G L F +M + I+
Sbjct: 290 TAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIK 349
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+EFT+ SI + C + +L +G + + K + V N+++ +Y CG V++A ++
Sbjct: 350 PDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRI 409
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F+ M H + ++W A+I G L+ + G EAL +FS++ + + PD T
Sbjct: 410 FNAMPHRDKISWTAVIFG-----------LAINGYGEEALDMFSQMLKASITPDEVTCIG 458
Query: 394 ILTICSRLVALEQGEQIHA-LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+L C+ +++G++ A +T + G +V +V++ + G ++ A V M +
Sbjct: 459 VLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVK 518
Query: 453 -TLISWTSMITGFANH 467
I W S++ H
Sbjct: 519 PNSIVWGSLLGACRVH 534
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/698 (31%), Positives = 377/698 (54%), Gaps = 57/698 (8%)
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP-----RINVVSWTSLISGYVQNSQPE 157
+G D +++ Y + G EEA K F + + NVVSWT+LI+G QN
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDF 344
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSL 216
A+ VF M+ G P ++T+ +A++AC++L +R G++IH Y +K + D D VGNSL
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC---GENGEAVQ-------------- 259
Y+ C S+ A + F I++ +++SW ++ G + EA++
Sbjct: 405 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Query: 260 ------------------GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
L FF +M S G+ PN T++ + CG + +L++G ++H
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGY 524
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
++ + V ++++ +Y C ++ A +F +S ++V WN++I+ AQ
Sbjct: 525 VLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQ------- 577
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
AL + ++N S ++ + T S L CS+L AL QG++IH ++ G +
Sbjct: 578 ----SGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDT 633
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ +L++MY +CG I+++ R+F M R L+SW MI+ + H A+ LF+
Sbjct: 634 CNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFR 693
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G++PN +TF L+ACS++G++ E YF+MM+ EY + P ++ Y C++D+ R G
Sbjct: 694 TMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQF 753
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
E +FI+KM FEPN +W + CR H N +L YAA L +L+P+ +Y ++ +I+
Sbjct: 754 NETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIY 813
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AGRWED A ++ L +E +++ SWI +K K++SF D HP +I ++ L
Sbjct: 814 SAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLY 873
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K GY +F L D +E + HSEK+A+AFGL++T +P+ ++K+ +C
Sbjct: 874 FDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLISTTAGTPLRIIKNLRVCG 933
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ K I+ + R+II+RD+ R H FV+G C+C D+
Sbjct: 934 DCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDY 971
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 260/563 (46%), Gaps = 83/563 (14%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + + + + C K+ + ++ +++ G + V +++++ KCG
Sbjct: 181 MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGR 240
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
M+ A++ F+ + +V W ++SGY + + A+ DM +G P VT
Sbjct: 241 MDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTW------ 294
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-----EK 239
N++ S Y+ G A K F + +
Sbjct: 295 -----------------------------NAIISGYAQSGQFEEASKYFLEMGGLKDFKP 325
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I +NG + L F KM+ EG++PN T+ S S C + LR G ++H
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 300 SLGIKL-GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG------H 352
IK+ S+L V NS++ Y KC V+ A++ F + +LV+WNAM+AG H
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 353 AQMMDLAKD--------DLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSI 394
+ ++L + D+ NG G AL F +++S GM P+ T S
Sbjct: 446 EEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGA 505
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L C ++ L+ G++IH L+ VG+AL++MY C +E A VF E+STR +
Sbjct: 506 LAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDV 565
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+ W S+I+ A S AL L +M L+ V N VT V AL ACS + + E+
Sbjct: 566 VVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGK---EI 622
Query: 515 MQKEYKIKPVMDH----YMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGC 567
Q + I+ +D LIDM+ R G I+++ FD + + D V W+V I+
Sbjct: 623 HQ--FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDL----VSWNVMISVY 676
Query: 568 RRHG-NME-LGFYAAEQLLKLKP 588
HG M+ + + + + LKP
Sbjct: 677 GMHGFGMDAVNLFQQFRTMGLKP 699
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 211/442 (47%), Gaps = 44/442 (9%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y S+LQ+C +L +HA +V G F+ + L+ VY + G +E+A+++FD +
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
NV SWT+++ Y E I +F M+ G P + ACS L++ R+GK
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKD 211
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
++ Y++ E ++ V S+ ++ CG ++ A + F I K+V W ++ GE
Sbjct: 212 VYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGE 271
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L+ S M G++P++ T +I S GYA + + +
Sbjct: 272 FKKALKCISDMKLSGVKPDQVTWNAIIS---------------------GYAQSGQFEEA 310
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSI 375
Y GL D N+V+W A+IAG Q NG EALS+
Sbjct: 311 SKYFLEMGGLKDFKP---------NVVSWTALIAGSEQ------------NGYDFEALSV 349
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYK 434
F K+ G+KP+ T +S ++ C+ L L G +IH +K L SD++VG +LV+ Y
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KC +E A R F + L+SW +M+ G+A +A++L +M G+ P+ +T+ G
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 495 ALAACSNAGMVYEALGYFEMMQ 516
+ + G AL +F+ M
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMH 491
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 207/421 (49%), Gaps = 54/421 (12%)
Query: 61 EALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS-HQDFFVMTFL 115
EALSV EG K + + S + C N L + IH + +K D V L
Sbjct: 345 EALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSL 404
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV-----------------QNSQPEL 158
V+ Y KC ++E A++ F + + ++VSW ++++GY Q +P++
Sbjct: 405 VDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDI 464
Query: 159 ------------------AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
A+ F M G P T+ AL AC + +++LGK+IH Y
Sbjct: 465 ITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGY 524
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
V++ E T VG++L S+YS C SL A F+ + ++V+ W ++I AC ++G +V
Sbjct: 525 VLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNA 584
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L +M ++ N T+ S C + +LR G ++H I+ G + + NS++ +
Sbjct: 585 LDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDM 644
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y +CG + +++++FD M +LV+WN MI+ + H G +A+++F +
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGM-----------HGFGMDAVNLFQQFR 693
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG--TALVNMYKKCGR 438
+ G+KP+ TF+++L+ CS +E+G + + +KT + D V +V++ + G+
Sbjct: 694 TMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRAGQ 752
Query: 439 I 439
Sbjct: 753 F 753
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 177/418 (42%), Gaps = 61/418 (14%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G T++ L C ++L + IH ++++ V + L+++Y C ++E A
Sbjct: 494 GMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVA 553
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF L +VV W S+IS Q+ + A+ + +M + VT+ +AL ACS L
Sbjct: 554 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 613
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++R GK+IH ++++ + + NSL +Y CGS+ + + F+ + +++++SW +I
Sbjct: 614 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 673
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G +G + + F + + G++PN T T++ S C HS
Sbjct: 674 SVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACS-----------HS-------- 714
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
GL++E K F M + + +A M+DL LS
Sbjct: 715 ----------------GLIEEGWKYFKMMK--TEYAMDPAVEQYACMVDL----LSRAGQ 752
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI--HALTLKTGFLSDVVVG 426
E L K+ +P+ + S+L C + E + L+ + V+
Sbjct: 753 FNETLEFIEKMP---FEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVL- 808
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLI-----SWT-------SMITGFANHSLSHQ 472
+ N+Y GR E A+++ M R + SW S + G +H L Q
Sbjct: 809 --MANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQ 864
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 126/265 (47%), Gaps = 33/265 (12%)
Query: 364 SAHNGG--TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
S H G A + S ++ + + ++SIL C +L L G Q+HA + G
Sbjct: 63 SVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+G+ L+ +Y + G +E A R+F +MS R + SWT+++ + + ++LF M+
Sbjct: 123 CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMV 182
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI-KPVMDHYM----------- 529
GVRP+ F ACS K Y++ K V D+ +
Sbjct: 183 NEGVRPDHFVFPKVFKACSEL--------------KNYRVGKDVYDYMLSIGFEGNSCVK 228
Query: 530 -CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKL 586
++DMF++ G ++ A F ++++F+ + +W++ ++G G + L + +L +
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVA 611
KP D ++ ++ + +G++E+ +
Sbjct: 288 KP-DQVTWNAIISGYAQSGQFEEAS 311
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/710 (30%), Positives = 383/710 (53%), Gaps = 34/710 (4%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF----VMTFLVNVYGKCGNMEEAQ 129
T +SLL+ C +S+ + +H +K G + + VMTF + G+ + A+
Sbjct: 39 THPLISLLETC---ESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCT--HEYGDFQYAR 93
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
++FD +P N+ W ++I GY + P+L + ++L+ML G P T +
Sbjct: 94 RLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDI 153
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ G+Q+H +V+K+ + + V +L +Y CG L++A F+ + +V++W +I
Sbjct: 154 ALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIIS 213
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A + G+ + R F M + + P TL + S C + LR G +VHS S
Sbjct: 214 AYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVES 273
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLAK------- 360
NL + N+++ +Y CG +D A +F M++ ++++W +++G + +D+A+
Sbjct: 274 NLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMP 333
Query: 361 -----------DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
D N EAL +F + ++ +KPD +T S+LT C+ L ALE GE
Sbjct: 334 EKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEW 393
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
I + +D+ V AL++MY KCG +++A +F EMS R +WT+MI G A +
Sbjct: 394 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 453
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL +F +ML A + P+++T++G L+AC++ G+V + YF M ++ I+P + HY
Sbjct: 454 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 513
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
CL+D+ R G ++EA++ I+ M + N ++W +AGCR + ++ +Q+L+L+P
Sbjct: 514 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 573
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+ Y +L +I+ + RW D+ ++ + ++ + + S I + +V+ F D HPQ
Sbjct: 574 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVHEFVAGDRSHPQ 633
Query: 650 SAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVS 704
+ I LD++ + K GY S D+E++ HSEKLAIAFGL+N+P
Sbjct: 634 TKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAIAFGLINSPPGV 693
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I + K+ MC DCHN K+++ + RE+IVRD R H F +G C+C+D+
Sbjct: 694 TIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKDY 743
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 217/440 (49%), Gaps = 44/440 (10%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
LG L +L G K ++ L + +L +H H++K G + FV T LV
Sbjct: 122 LGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALV 181
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y CG ++ A+ VFD P+ +V++W +IS Y + + E + +FL M + PT V
Sbjct: 182 QMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTV 241
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL L+ACS L+ +R GK++H+YV + E + + N++ +Y+ CG ++SA+ F +
Sbjct: 242 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
Query: 237 REKNVMSWTTVIGACGENGEA-------------------------------VQGLRFFS 265
++++SWTT++ GE + L F
Sbjct: 302 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFR 361
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
M + ++P+EFT+ S+ + C + +L +G + + + ++L VRN+++ +Y KCG
Sbjct: 362 NMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCG 421
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
VD+A+ +F MS + TW AMI G L+ + G +AL +FS + + +
Sbjct: 422 DVDKAESIFREMSQRDKFTWTAMIVG-----------LAVNGHGEKALDMFSNMLKASIL 470
Query: 386 PDLYTFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD T+ +L+ C+ +++G + +T + G ++ LV++ + GR++ A
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530
Query: 445 VFVEMSTR-TLISWTSMITG 463
V M + I W +++ G
Sbjct: 531 VIENMPIKANSIVWGALLAG 550
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 221/695 (31%), Positives = 371/695 (53%), Gaps = 22/695 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + +++S+L CVN ++L + + + I +T D FV T L+ +Y +C + E+
Sbjct: 255 EGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPED 314
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VF + + N+++W+++I+ + + A+ F M + G P VT + L ++
Sbjct: 315 AAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTT 374
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ +IH + ++ +D T++ N+L ++Y C S + A F+++ N++SW ++
Sbjct: 375 PSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSM 434
Query: 248 IG---ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
IG C + +A+Q F M +GIQP+ +I C R VH +
Sbjct: 435 IGIYVQCERHDDALQ---LFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEE 491
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V+ S++ +Y K G +D A+ + M + WN +I G+A
Sbjct: 492 SGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYA----------- 540
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H EAL + KL + D TF S+L C+ +L +G+ IH+ ++ G SDV+
Sbjct: 541 LHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVI 600
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V AL NMY KCG +E A R+F M R+ +SW M+ +A H S + L+L M G
Sbjct: 601 VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG 660
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+ N +TFV L++CS+AG++ E YF + + I+ +HY CL+D+ R G ++EA
Sbjct: 661 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEA 720
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+I KM EP V W+ + CR +++ G AA +LL+L P + + +L +I+
Sbjct: 721 EKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSER 780
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
G W++ A ++ ++ + S I++K+KV+ F+ D HP++AEI+ ++EL
Sbjct: 781 GDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAM 840
Query: 665 KCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
+ GY L D +ES YHSEKLAIAFGL++TP S + + K+ +C DCH
Sbjct: 841 REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCH 900
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ +T REI+VRD+ R H F +G C+C+D+
Sbjct: 901 TATKFISKITGREIVVRDNHRFHHFRDGSCSCKDY 935
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 271/563 (48%), Gaps = 41/563 (7%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQEAL++ L EG + V++L C + + L + ++HA ++ G Q+ V T
Sbjct: 39 FQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATA 98
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY-VQNSQPELAIHVFLDMLEAGNYP 173
L+N+YGKCG + +AQ VF+ + NVV+W +++ Y +Q +LA+ +F ML G
Sbjct: 99 LLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKA 158
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T L + +++R GK IH+ V + + D V +L + Y+ CGSL A K F
Sbjct: 159 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 218
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + ++V +W ++I A + + + F +M EG + + T SI C +L+
Sbjct: 219 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQ 278
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G V + + +L V +++ +Y +C ++A ++F M NL+TW+A+I A
Sbjct: 279 HGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFA 338
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
H EAL F + G+ P+ TF S+L + LE+ +IH L
Sbjct: 339 D-----------HGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 387
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ G + ALVN+Y +C + A VF ++ LISW SMI + A
Sbjct: 388 ITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDA 447
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACS------NAGMVYE-----ALGYFEMMQKEYKIK 522
LQLF M G++P++V F+ L AC+ +V++ LG ++Q
Sbjct: 448 LQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTS---- 503
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
L++M+ + G ++ A +++MD E W+V I G HG A ++
Sbjct: 504 --------LVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHGRSREALEAYQK 554
Query: 583 L-LKLKPKDCESYAMLLDIFVSA 604
L L+ P D ++ +L+ S+
Sbjct: 555 LQLEAIPVDKVTFISVLNACTSS 577
Score = 219 bits (557), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 239/475 (50%), Gaps = 18/475 (3%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y +CG++ +A F + NVVSW +IS Y + A+ +F ML G P +T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L L +C S +R G +HA ++ +T V +L ++Y CG+L A F +
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 238 EKNVMSWTTVIGACGENGEAVQ-GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EKNV++W ++G G + + F++ML EG++ N T ++ + +LR G
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+HS + ++ ++ V +++ Y KCG + +A+K+FDGM ++ TWN+MI+ ++
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYS--- 237
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
+S +G EA IF ++ G + D TF SIL C L+ G+ + +
Sbjct: 238 ------ISERSG--EAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISE 289
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
T F D+ VGTAL+ MY +C E A++VF M LI+W+++IT FA+H +AL+
Sbjct: 290 TSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRY 349
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F M G+ PN+VTF+ L + + E L ++ E+ + L++++
Sbjct: 350 FRMMQQEGILPNRVTFISLLNGFTTPSGL-EELSRIHLLITEHGLDDTTTMRNALVNVYG 408
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIA---GCRRHGNMELGFYAAEQLLKLKP 588
R ++A +++ PN + W+ I C RH + L + Q ++P
Sbjct: 409 RCESPDDARTVFDQLEL-PNLISWNSMIGIYVQCERHDDA-LQLFRTMQQQGIQP 461
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/412 (30%), Positives = 211/412 (51%), Gaps = 21/412 (5%)
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+YS CGSL A+ AF +IR +NV+SW +I A + L F ML EG+ PN T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
L ++ + CG+ LR G VH+L ++ G+ N V +++ +Y KCG + +AQ +F+ M+
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
N+VTWNAM+ ++ K A+ +F+++ G+K ++ TF ++L
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWK----------LAVELFTRMLLEGVKANVITFLNVLNSV 170
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
AL +G+ IH+ ++ DV V TALVN Y KCG + A +VF M R++ +W
Sbjct: 171 VDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWN 230
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
SMI+ ++ S +A +F+ M G R ++VTF+ L AC N E L + + +++
Sbjct: 231 SMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNP----ETLQHGKHVRES 286
Query: 519 YKIKPV-MDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM-- 573
+D ++ LI M+ R E+A +M + N + WS I HG+
Sbjct: 287 ISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADHGHCGE 345
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
L ++ Q + P ++ LL+ F + E+++ + L E L +T
Sbjct: 346 ALRYFRMMQQEGILPNRV-TFISLLNGFTTPSGLEELSRIHLLITEHGLDDT 396
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/665 (33%), Positives = 361/665 (54%), Gaps = 34/665 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G FV L++ Y K G + A++VF + + V++ +++ G +
Sbjct: 371 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGL 430
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F M AG S + L + H+ + + + V NS
Sbjct: 431 HTQALQLFAAMRRAGY---------------SRHPLHLLQYSHSRS-RSTSVLNVFVNNS 474
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L YS C L+ + F+ + E++ +S+ +I A N A LR F +M G
Sbjct: 475 LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQ 534
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
++ SV G++ + +G Q+H+ + LG AS + N+++ +Y KCG++D A+ F
Sbjct: 535 VLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFS 594
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSI 394
S + ++W A+I G+ Q NG EAL +FS + +G++PD TFSSI
Sbjct: 595 NRSEKSAISWTALITGYVQ------------NGQHEEALQLFSDMRRAGLRPDRATFSSI 642
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ S L + G Q+H+ +++G+ S V G+ LV+MY KCG ++ A R F EM R
Sbjct: 643 IKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNS 702
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISW ++I+ +A++ + A+++FE ML G P+ VTF+ LAACS+ G+ E + YF +
Sbjct: 703 ISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHL 762
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ +Y I P +HY C+ID R+GC + + +M F+ + +IW+ + CR HGN E
Sbjct: 763 MKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQE 822
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AA++L ++P D Y +L +I+ AG+WED A VK + R+ + + +SW+ IK
Sbjct: 823 LARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIK 882
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTDEE---SASVYHSE 689
K+YSF ND P EI LD L ++ GYK + + D E + YHSE
Sbjct: 883 QKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELKLESLKYHSE 942
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LAIAF L+NTP +PI ++K+ T C DCH IK+I+ + R+IIVRDS+R H F +G C
Sbjct: 943 RLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVC 1002
Query: 750 TCRDF 754
+C D+
Sbjct: 1003 SCGDY 1007
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 223/471 (47%), Gaps = 44/471 (9%)
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
H++ F + +++ Y G++ AQ +F + P N +WT ++ + + A+ +F
Sbjct: 285 HKNIFSLNLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRA 344
Query: 166 MLEAGNYPTNVTLGTALT--ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
ML G P VT+ T L C+ +H + +K+ + V N+L Y
Sbjct: 345 MLGEGVIPDRVTVTTVLNLPGCTV-------PSLHPFAIKFGLDTHVFVCNTLLDAYCKH 397
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G L +A + F + +K+ +++ ++ C + G Q L+ F+ M G + L S
Sbjct: 398 GLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYS 457
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
S+ N+ V NS++ Y KC +D+ ++LFD M + V
Sbjct: 458 HSRSRSTSVL----------------NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNV 501
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
++N +IA +A + L +F ++ G + ++++L++ L
Sbjct: 502 SYNVIIAAYAW-----------NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPD 550
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+ G+QIHA + G S+ ++G AL++MY KCG ++ A F S ++ ISWT++ITG
Sbjct: 551 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITG 610
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYK 520
+ + +ALQLF DM AG+RP++ TF + A S+ M+ LG + +++ YK
Sbjct: 611 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI--GLGRQLHSYLIRSGYK 668
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
L+DM+ + GC++EA +M E N + W+ I+ +G
Sbjct: 669 SSVFSGS--VLVDMYAKCGCLDEALRTFDEMP-ERNSISWNAVISAYAHYG 716
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 116/214 (54%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
Q Y ++L + + + IHA +V G + + L+++Y KCG ++ A+ F
Sbjct: 534 QVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNF 593
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
N + +SWT+LI+GYVQN Q E A+ +F DM AG P T + + A SSL I
Sbjct: 594 SNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIG 653
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LG+Q+H+Y+++ + G+ L +Y+ CG L+ A++ F+ + E+N +SW VI A
Sbjct: 654 LGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYA 713
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
GEA ++ F ML G P+ T S+ + C
Sbjct: 714 HYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAAC 747
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 173/387 (44%), Gaps = 56/387 (14%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N + S YS+ G L +A F +N +WT ++ A G L F ML EG+
Sbjct: 292 NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 351
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ T+T++ ++ G + +H IK G +++ V N+++ Y K GL+ A+++
Sbjct: 352 PDRVTVTTVLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRV 406
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M + VT+NAM MM +K+ L T+AL +F+ + +G Y+
Sbjct: 407 FLEMHDKDAVTYNAM------MMGCSKEGLH-----TQALQLFAAMRRAG-----YSRHP 450
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+ + + H+ + T L +V V +L++ Y KC ++ R+F EM R
Sbjct: 451 LHLL----------QYSHSRSRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERD 499
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAG----VRP--NQVTFVGALAACSNAGMVYE 507
+S+ +I +A + + L+LF +M G V P ++ G+L ++
Sbjct: 500 NVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHA 559
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF----EPNEVIWSVF 563
L + ++ LIDM+ + G ++ A K +F E + + W+
Sbjct: 560 QLVLLGLASEDLLGN-------ALIDMYSKCGMLDAA-----KSNFSNRSEKSAISWTAL 607
Query: 564 IAGCRRHGNME--LGFYAAEQLLKLKP 588
I G ++G E L ++ + L+P
Sbjct: 608 ITGYVQNGQHEEALQLFSDMRRAGLRP 634
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + ++ G + +++ S+++ + + +H++++++G F + L
Sbjct: 618 EEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 677
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KCG ++EA + FD +P N +SW ++IS Y + + AI +F ML G P +
Sbjct: 678 VDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDS 737
Query: 176 VTLGTALTACS 186
VT + L ACS
Sbjct: 738 VTFLSVLAACS 748
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/660 (32%), Positives = 363/660 (55%), Gaps = 21/660 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +VK G V L+ +Y G EA VF +P +++SW SL++ +V + +
Sbjct: 266 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 325
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ + M+ +G VT +AL AC + + G+ +H VV + +GN+
Sbjct: 326 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+Y G ++ + + ++ ++V++W +IG E+ + + L F M EG+ N
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 276 EFTLTSISSVC---GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
T+ S+ S C G +L G +H+ + G+ S+ V+NS++ +Y KCG + +Q
Sbjct: 446 YITVVSVLSACLLPGDLLER--GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+G+ + N++TWNAM+A +A H G E L + SK+ S G+ D ++FS
Sbjct: 504 LFNGLDNRNIITWNAMLAANAH-----------HGHGEEVLKLVSKMRSFGVSLDQFSFS 552
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
L+ ++L LE+G+Q+H L +K GF D + A +MY KCG I ++ R
Sbjct: 553 EGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNR 612
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+L SW +I+ H + F +ML G++P VTFV L ACS+ G+V + L Y+
Sbjct: 613 SLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYY 672
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+M+ +++ ++P ++H +C+ID+ R G + EA FI KM +PN+++W +A C+ HGN
Sbjct: 673 DMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGN 732
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
++ G AAE L KL+P+D Y + ++F + GRWEDV V+ + + + SW++
Sbjct: 733 LDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 792
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--KQQESFELTDEESAS---VYH 687
+KDKV SF D HPQ+ EI+ L+++ + K GY ++ + TDEE H
Sbjct: 793 LKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNH 852
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LA+A+ L++TP S + + K+ +C DCH+ K ++ + R I++RD R H F G
Sbjct: 853 SERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/533 (28%), Positives = 265/533 (49%), Gaps = 23/533 (4%)
Query: 72 VQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
++ SS+V SL+ C S+ + +H + K+G D +V T ++++YG G + +
Sbjct: 37 IKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCS 96
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P NVVSWTSL+ GY +PE I ++ M G ++ +++C L
Sbjct: 97 RKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLL 156
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ LG+QI VVK E +V NSL S+ + G+++ A F+++ E++ +SW ++
Sbjct: 157 KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIA 216
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +NG + R FS M + N T++++ SV G + + G +H L +K+G+
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD 276
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y G EA +F M +L++WN+++A D S
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA------SFVNDGRS---- 326
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL + + SSG + TF+S L C E+G +H L + +G + ++G A
Sbjct: 327 -LDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 385
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY K G + + RV ++M R +++W ++I G+A +AL F+ M + GV N
Sbjct: 386 LVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSN 445
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+T V L+AC G + E + LI M+ + G + + D
Sbjct: 446 YITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF 505
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+D N + W+ +A HG+ E++LKL K S+ + LD F
Sbjct: 506 NGLD-NRNIITWNAMLAANAHHGH-------GEEVLKLVSK-MRSFGVSLDQF 549
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 134/516 (25%), Positives = 237/516 (45%), Gaps = 30/516 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +S ++ C K S I +VK+G V L+++ G GN++
Sbjct: 137 EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDY 196
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +FD + + +SW S+ + Y QN E + +F M + + T+ T L+
Sbjct: 197 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 256
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ + G+ IH VVK + V N+L +Y+ G A F ++ K+++SW ++
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + +G ++ L M+S G N T TS + C T G +H L + G
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N + N+++ +Y K G + E++++ M ++V WNA+I G+A+ D K
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK------- 429
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA---LEQGEQIHALTLKTGFLSDVV 424
AL+ F + G+ + T S+L+ C L+ LE+G+ +HA + GF SD
Sbjct: 430 ----ALAAFQTMRVEGVSSNYITVVSVLSAC--LLPGDLLERGKPLHAYIVSAGFESDEH 483
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +L+ MY KCG + + +F + R +I+W +M+ A+H + L+L M G
Sbjct: 484 VKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFG 543
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH----YMCLIDMFVRLGC 540
V +Q +F L+A + ++ E + +K +H + DM+ + G
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLHGL-----AVKLGFEHDSFIFNAAADMYSKCGE 598
Query: 541 IEEAFDFIKKMDFEPNEVI--WSVFIAGCRRHGNME 574
I E +K + N + W++ I+ RHG E
Sbjct: 599 IGEV---VKMLPPSVNRSLPSWNILISALGRHGYFE 631
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 198/402 (49%), Gaps = 14/402 (3%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+++ G V ++ S L C I+H +V +G + + LV++YGK G
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIG 394
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
M E+++V +PR +VV+W +LI GY ++ P+ A+ F M G +T+ + L+
Sbjct: 395 EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLS 454
Query: 184 AC-SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC + + GK +HAY+V E D V NSL ++Y+ CG L+S+ FN + +N++
Sbjct: 455 ACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNII 514
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+W ++ A +G + L+ SKM S G+ ++F+ + S + L G Q+H L
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLA 574
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG+ + + N+ +Y KCG + E K+ + +L +WN +I+
Sbjct: 575 VKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA----------- 623
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLS 421
L H E + F ++ G+KP TF S+LT CS +++G + + + G
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMIT 462
+ ++++ + GR+ A +M + + W S++
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 213/440 (48%), Gaps = 28/440 (6%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI-RL 193
+P N VSW +++SG V+ + F M + G P++ + + +TAC S+ R
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G Q+H +V K D V ++ LY G ++ + K F + ++NV+SWT+++ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
GE + + + M EG+ NE +++ + S CG + +G Q+ +K G S L V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EA 372
NS++ + G VD A +FD MS + ++WN++ A +AQ NG E+
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ------------NGHIEES 228
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
IFS + + + T S++L++ + + G IH L +K GF S V V L+ M
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 288
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y GR A+ VF +M T+ LISW S++ F N S AL L M+ +G N VTF
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM------CLIDMFVRLGCIEEAFD 546
ALAAC +FE + + + V + L+ M+ ++G + E+
Sbjct: 349 TSALAACFTP-------DFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 547 FIKKMDFEPNEVIWSVFIAG 566
+ +M + V W+ I G
Sbjct: 402 VLLQMP-RRDVVAWNALIGG 420
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 112/238 (47%), Gaps = 3/238 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL-SNAEIIHAHIVKTGSHQD 108
+ +P ++L + + V EG + VS+L C+ L + +HA+IV G D
Sbjct: 424 DEDPDKALAAFQTMRV--EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESD 481
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KCG++ +Q +F+ L N+++W ++++ + E + + M
Sbjct: 482 EHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G + L+A + L + G+Q+H VK E D+ + N+ +YS CG +
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+K +++ SW +I A G +G + F +ML GI+P T S+ + C
Sbjct: 602 VVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/705 (32%), Positives = 375/705 (53%), Gaps = 35/705 (4%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQEA+ EG + ++ +++ C +L + +H ++K G D +V F
Sbjct: 105 FQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNF 164
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y K G +E A+KVFD +P ++VSW S++SGY + ++ F +ML GN
Sbjct: 165 LIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKAD 224
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ +AL ACS +R G +IH V++ + E D V SL +Y CG ++ A + FN
Sbjct: 225 RFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFN 284
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
RI KN+++W +IG E+ + + P+ T+ ++ C +L
Sbjct: 285 RIYSKNIVAWNAMIGGMQEDDKVI---------------PDVITMINLLPSCSQSGALLE 329
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H I+ + L + +++ +Y KCG + A+ +F+ M+ N+V+WN M+A + Q
Sbjct: 330 GKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQ 389
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ EAL +F + + +KPD T +S+L + L + +G+QIH+
Sbjct: 390 -----------NEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYI 438
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K G S+ + A+V MY KCG ++ A F M + ++SW +MI +A H ++
Sbjct: 439 MKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSI 498
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
Q F +M G +PN TFV L ACS +G++ E G+F M+ EY I P ++HY C++D+
Sbjct: 499 QFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDL 558
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++EA FI++M P IW +A R H ++ L AA +L LK + Y
Sbjct: 559 LGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCY 618
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ AGRWEDV +K L +E+ L +T S + I + SF D H + I+
Sbjct: 619 VLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIY 678
Query: 655 KVLDELVEKAKCFGYKQQ-ESFELTD----EESASVYHSEKLAIAFGLLNTPIVSPILVV 709
VLD L++K Y F D ++ YHS KLAI FGL++T I +P++V
Sbjct: 679 DVLDILLKKIGEDIYLHSLTKFRPLDVAKKRGNSPEYHSVKLAICFGLISTAIGNPVIVR 738
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+T +C DCH K I+ +T REI+V D+K H F +G C+CRD+
Sbjct: 739 KNTRICDDCHRAAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDY 783
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 188/376 (50%), Gaps = 26/376 (6%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G M A +F+ + + W +I GY N + AI + M G N T +
Sbjct: 72 GLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVI 131
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC L ++ +G+++H ++K + D V N L +Y G + A K F+ + ++++
Sbjct: 132 KACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLV 191
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +++ +G+ + L F +ML G + + F + S C LR G ++H
Sbjct: 192 SWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQV 251
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ ++ V+ S++ +Y KCG VD A+++F+ + N+V WNAMI G + +DD
Sbjct: 252 IRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG------MQEDD 305
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
+ PD+ T ++L CS+ AL +G+ IH ++ FL
Sbjct: 306 --------------------KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPY 345
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+V+ TALV+MY KCG ++ A VF +M+ + ++SW +M+ + + +AL++F+ +L
Sbjct: 346 LVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILN 405
Query: 483 AGVRPNQVTFVGALAA 498
++P+ +T L A
Sbjct: 406 EPLKPDAITIASVLPA 421
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 19/249 (7%)
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSK 378
+++ GL+ A +F+ M+H + WN +I G+ N G EA+ + +
Sbjct: 68 FVESGLMGNALDMFEKMNHSDTFIWNVIIRGYT-------------NNGLFQEAIDFYYR 114
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G++ D +TF ++ C L+AL G+++H +K GF DV V L++MY K G
Sbjct: 115 MECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGF 174
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A +VF EM R L+SW SM++G+ +L F++ML G + ++ + AL A
Sbjct: 175 IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGA 234
Query: 499 CSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
CS + + + ++++ E ++ ++ LIDM+ + G ++ A ++ + N
Sbjct: 235 CSIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYAERVFNRI-YSKNI 291
Query: 558 VIWSVFIAG 566
V W+ I G
Sbjct: 292 VAWNAMIGG 300
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 436 CGRIE-----RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
CG +E A +F +M+ W +I G+ N+ L +A+ + M G+R +
Sbjct: 66 CGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNF 125
Query: 491 TFVGALAACSN--AGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFD 546
TF + AC A MV + ++ K KI +D Y+C LIDM++++G IE A
Sbjct: 126 TFPFVIKACGELLALMVGQ-----KVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEK 180
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
+M + V W+ ++G + G+ +++L+L K
Sbjct: 181 VFDEMPVR-DLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNK 222
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 377/683 (55%), Gaps = 25/683 (3%)
Query: 84 CVNRKSLSNAEIIHAHIV---KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
C + K L + +HA + +T +H + LV++Y KCG + A+ +FD +P NV
Sbjct: 22 CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHA 199
VSW L++GY+ + +F +M+ N P TAL+ACS ++ G Q H
Sbjct: 82 VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---MSWTTVIGACGENGE 256
+ K+ V ++L +YS C + A++ + + ++V S+ +V+ A E+G
Sbjct: 142 LLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGR 201
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ + +M+ E + + T + +C + L++G +VH+ ++ G + V +
Sbjct: 202 GEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSM 261
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSI 375
++ +Y KCG V A+ +FDG+ + N+V W A++ + Q NG E+L++
Sbjct: 262 LIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQ------------NGYFEESLNL 309
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F+ ++ G P+ YTF+ +L C+ + AL G+ +HA K GF + V+V AL+NMY K
Sbjct: 310 FTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSK 369
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
G I+ + VF +M R +I+W +MI G+++H L QALQ+F+DM+ A PN VTF+G
Sbjct: 370 SGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGV 429
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L+A S+ G+V E Y + + +KI+P ++HY C++ + R G ++EA +F+K +
Sbjct: 430 LSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKW 489
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ V W + C H N +LG AE +L++ P D +Y +L +++ A RW+ V ++
Sbjct: 490 DVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRK 549
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF 675
L RE + + SW+ I++ ++ F HP+S +I+K + +L+ K GY +
Sbjct: 550 LMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYKKVQQLLALIKPLGYVPNIAS 609
Query: 676 ELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L D +E YHSEKLA+A+GL+ P +PI ++K+ MC DCH +K+I+ +T
Sbjct: 610 VLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIKNLRMCDDCHTAVKLISKVTN 669
Query: 731 REIIVRDSKRLHKFVNGHCTCRD 753
R IIVRD+ R H F +G CTC D
Sbjct: 670 RLIIVRDANRFHHFRDGSCTCLD 692
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 219/440 (49%), Gaps = 30/440 (6%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHA-YVVKYQTEDDTSVG--NSLCSLYSTCGSLNSA 229
P+ LG L C+ ++ + GK +HA ++++ QT + + + NSL LY CG L A
Sbjct: 10 PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLA 69
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGT 288
F+ + +NV+SW ++ G ++ L F M+S + PNE+ T+ S C
Sbjct: 70 RNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSH 129
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVN-LVTW 345
++ G Q H L K G + V+++++++Y +C V+ A ++ D + HVN + ++
Sbjct: 130 GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSY 189
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
N+++ + L G EA+ + ++ + D T+ ++ +C+++ L+
Sbjct: 190 NSVL-----------NALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQ 238
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G ++HA L+ G + D VG+ L++MY KCG + A VF + R ++ WT+++T +
Sbjct: 239 LGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYL 298
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ ++L LF M G PN+ TF L AC AG+ AL + +++ +
Sbjct: 299 QNGYFEESLNLFTCMDREGTLPNEYTFAVLLNAC--AGIA--ALRHGDLLHARVEKLGFK 354
Query: 526 DHYM---CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
+H + LI+M+ + G I+ +++ M + + + W+ I G HG LG A +
Sbjct: 355 NHVIVRNALINMYSKSGSIDSSYNVFTDMIYR-DIITWNAMICGYSHHG---LGKQALQV 410
Query: 583 LLKL-KPKDCESYAMLLDIF 601
+ ++C +Y + +
Sbjct: 411 FQDMVSAEECPNYVTFIGVL 430
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 4/277 (1%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV ++ C + L +HA +++ G D FV + L+++YGKCG + A+ VFD L
Sbjct: 223 TYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGL 282
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
NVV WT+L++ Y+QN E ++++F M G P T L AC+ + ++R G
Sbjct: 283 QNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGD 342
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA V K ++ V N+L ++YS GS++S+ F + +++++W +I +G
Sbjct: 343 LLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHG 402
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVR 314
Q L+ F M+S PN T + S + ++ G ++ L L
Sbjct: 403 LGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHY 462
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMI 349
++ L + GL+DEA+ F + V ++V W ++
Sbjct: 463 TCMVALLSRAGLLDEAEN-FMKTTQVKWDVVAWRTLL 498
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 6/199 (3%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+E+L++ T EG ++ LL C +L + +++HA + K G V
Sbjct: 303 FEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNA 362
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y K G+++ + VF ++ ++++W ++I GY + + A+ VF DM+ A P
Sbjct: 363 LINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPN 422
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
VT L+A S L ++ G ++++ ++ E + +L S G L+ A
Sbjct: 423 YVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFM 482
Query: 234 NRIREK-NVMSWTTVIGAC 251
+ K +V++W T++ AC
Sbjct: 483 KTTQVKWDVVAWRTLLNAC 501
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/594 (34%), Positives = 337/594 (56%), Gaps = 18/594 (3%)
Query: 167 LEAGNYPTNVTL-GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
LE P + T L C+ + + G+ +H ++++ D + N+L ++Y+ CGS
Sbjct: 42 LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGS 101
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A K F+++ E++ ++WTT+I ++ L F++ML G PNEFTL+S+
Sbjct: 102 LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
G Q+H +K G+ SN+ V ++++ LY + GL+D+AQ +FD + N V+W
Sbjct: 162 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 221
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
NA+IAGHA+ G +AL +F + G +P ++++S+ CS LE
Sbjct: 222 NALIAGHARRC-----------GTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLE 270
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+ +HA +K+G G L++MY K G I A ++F ++ R ++SW S++T +A
Sbjct: 271 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 330
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H ++A+ FE+M G+RPN+++F+ L ACS++G++ E Y+E+M+K+ +
Sbjct: 331 QHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAW 390
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY+ ++D+ R G + A FI++M EP IW + CR H N ELG YAAE + +
Sbjct: 391 -HYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 449
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P D + +L +I+ S GRW D A V+ +E + + SW+ I++ ++ F ND
Sbjct: 450 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 509
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNT 700
HPQ EI + +E++ K K GY S + D++ V YHSEK+A+AF LLNT
Sbjct: 510 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 569
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P S I + K+ +C DCH+ IK+ + REIIVRD+ R H F +G C+C+D+
Sbjct: 570 PPGSTIHIKKNIRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDY 623
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 205/397 (51%), Gaps = 12/397 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V Y +LL++C K L+ I+H H++++ D + L+N+Y KCG++EEA+KV
Sbjct: 49 VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKV 108
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD +P + V+WT+LISGY Q+ +P A+ +F ML G P TL + + A ++
Sbjct: 109 FDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G Q+H + VK + + VG++L LY+ G ++ A F+ + +N +SW +I
Sbjct: 169 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 228
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ L F ML EG +P+ F+ S+ C + L G VH+ IK G
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
N+++ +Y K G + +A+K+FD ++ ++V+WN+++ +AQ H G E
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQ-----------HGFGNE 337
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ F ++ G++P+ +F S+LT CS L++G + L K G + + +V+
Sbjct: 338 AVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVD 397
Query: 432 MYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+ + G + RA R EM T W +++ H
Sbjct: 398 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 434
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Query: 54 VRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
R G ++AL + L EG + SY SL C + L + +HA+++K+G
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F L+++Y K G++ +A+K+FD L + +VVSW SL++ Y Q+ A+ F +M
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRG 348
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P ++ + LTACS + G + + K + ++ L G LN A
Sbjct: 349 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRA 408
Query: 230 IKAFNRIR-EKNVMSWTTVIGAC 251
++ + E W ++ AC
Sbjct: 409 LRFIEEMPIEPTAAIWKALLNAC 431
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/717 (32%), Positives = 380/717 (52%), Gaps = 33/717 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG--KCGNM 125
+G +V++++ + + +C N L IHAH+++T D + + L+ Y C +
Sbjct: 66 KGNEVESTNILEFIDQCTNTMQLKQ---IHAHMLRTSRFCDPYTASKLLTAYAISSCSCL 122
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTNVTLGTALTA 184
A+ VF+ +P+ N+ W +LI GY +S P + +FL ML + +P T A
Sbjct: 123 IYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKA 182
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S L+ + LG +H V+K D + NSL + Y + G+ + A + F + K+V+SW
Sbjct: 183 ASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSW 242
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I A G + L F +M + ++PN T+ S+ S C + L G + S
Sbjct: 243 NAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIEN 302
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--------- 355
G+ +L + N+++ +Y+KCG +++A+ LF+ MS ++V+W M+ GHA++
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCI 362
Query: 356 MDLAKDDLSA----------HNGGTE-ALSIFSKLN-SSGMKPDLYTFSSILTICSRLVA 403
D +A NG ALS+F ++ S KPD T L ++L A
Sbjct: 363 FDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGA 422
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
++ G IH K + + T+L++MY KCG + +A VF + + + W++MI
Sbjct: 423 IDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGA 482
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
A + AL LF ML A ++PN VTF L AC++AG+V E FE M+ Y I P
Sbjct: 483 LAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVP 542
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+ HY+C++D+F R G +E+A FI+KM P +W + C RHGN+EL A + L
Sbjct: 543 QIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNL 602
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
L+L+P + ++ +L +I+ AG WE V+ ++ L R+ + + S I + V+ F
Sbjct: 603 LELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVG 662
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTDE----ESASVYHSEKLAIAFGL 697
D HP S +I+ LDE+ EK K GYK S +L++E E + HSEKLAIAFGL
Sbjct: 663 DNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGL 722
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++T PI +VK+ +C DCH F K+++ L R+I++RD R H F G C+C D+
Sbjct: 723 ISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDY 779
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 237/686 (34%), Positives = 374/686 (54%), Gaps = 22/686 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S + SLL V+++ L+ IHA +V +G + F++T VN G + A+KVFD
Sbjct: 72 SFFSSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDE 128
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
P +V W ++I GY ++ AI ++ M +G P TL L ACS + + +G
Sbjct: 129 FPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVG 188
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K++H + + E D V N L +LY+ CG + A F + ++N++SWT++I G+N
Sbjct: 189 KRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN 248
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ LR F +M ++P+ L S+ + L G +H +K+G +
Sbjct: 249 GLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLL 308
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EAL 373
S+ +Y KCG V A+ FD M N++ WNAMI+G+A+ NG T EA+
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAK------------NGYTNEAV 356
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ S ++ D T S + C+++ +L+ + + KT + +DV V TAL++M+
Sbjct: 357 GLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMF 416
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG ++ A VF + ++ W++MI G+ H A+ LF M AGV PN VTFV
Sbjct: 417 AKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFV 476
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L AC+++G+V E F M K Y I+ HY C++D+ R G + EA+DFI M
Sbjct: 477 GLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPI 535
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EP +W + C+ + ++ LG YAAEQL L P + Y L +++ S+ W+ VA V
Sbjct: 536 EPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKV 595
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-KQQ 672
+ L RE+ LS+ +S I I K+ +F+ D HP+ EIF+ L+ L + K G+
Sbjct: 596 RILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHI 655
Query: 673 ESF--ELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
ES +L EE HSE+LAIA+GL++T + + + K+ C +CH+ K+I+ L
Sbjct: 656 ESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNLRACINCHSATKLISKL 715
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H F NG C+CRD+
Sbjct: 716 VNREIVVRDANRFHHFKNGVCSCRDY 741
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/700 (31%), Positives = 382/700 (54%), Gaps = 22/700 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNR-KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L G ++ S+L + R ++L + +H+HI++TG D VM +V +YGKCG
Sbjct: 107 MLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCG 166
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++E+A VFD++ NV SWT +I+ Y QN + + M +AG P T T L
Sbjct: 167 DVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLG 226
Query: 184 ACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+++ ++ K +HA + D D +VG +L +LY CG+L A F +I K+++
Sbjct: 227 ACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIV 286
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW+++I A ++G+A ++ M EG++PN T ++ ++ + + G ++H+
Sbjct: 287 SWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARI 346
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++ GY+ ++ + ++++ +Y G V+ A+ +F+ ++V+W++MIAG++Q A+
Sbjct: 347 VQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPAR-- 404
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
ALS+F ++ G++P+ TF S + C+ + AL +G Q+H G D
Sbjct: 405 ---------ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKD 455
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V V TALVN+Y KCGR+E A VF+ M + L++WTS+ + + ++L+L M L
Sbjct: 456 VPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMEL 515
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
G++P+ + FV L +C+ AG + + L Y+ +M +++ I P ++H C++D+ R G +E
Sbjct: 516 QGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLE 575
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
A I M FE + + W + + C+ H + AAE++ +L+PK+ Y +L +F
Sbjct: 576 AAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFC 634
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS--AEIFKVLDEL 660
+AG WE + + S I I D+V+ F + P EIF L++L
Sbjct: 635 AAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKL 694
Query: 661 VEKAKCFGY-KQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ + GY + L D +E+A YHSE LA+ G+++TP +P+ + K+ M
Sbjct: 695 GREMQGAGYVPDATAVRLRDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRM 754
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH K ++ L R I VRD +R H F NG C+C D+
Sbjct: 755 CSDCHIATKFVSKLVHRRISVRDGRRHHHFENGVCSCGDY 794
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 276/539 (51%), Gaps = 26/539 (4%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-----FFVMTFLVNVYGKCGNM 125
+ + S+ ++L C + ++L + +H +++ QD + ++ +Y +CG
Sbjct: 7 QAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCT 66
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+ A VFD + NVV+WTSLIS + A+ +F ML +G P +T + L
Sbjct: 67 DLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKW 126
Query: 186 SSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S E ++ GK++H+++++ E D V N + +Y CG + A F+ I++ NV SW
Sbjct: 127 SGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSW 186
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI- 303
T +I A +NG ++ LR S+M G++P+ +T T++ C + +L +H+ I
Sbjct: 187 TIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATIS 246
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
G + V +++ LY KCG ++EA +F + + ++V+W++MIA AQ
Sbjct: 247 STGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQ--------- 297
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
A+ + ++ G++P+ TF ++L + L A + G++IHA ++ G+ DV
Sbjct: 298 --SGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDV 355
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+ +ALV MY G +E A +F R ++SW+SMI G++ + +AL LF +M +
Sbjct: 356 CLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVD 415
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ--KEYKIKPVMDHYMCLIDMFVRLGCI 541
GV+PN VTFV A+ AC+ G + E ++ K PV L++++ + G +
Sbjct: 416 GVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVA---TALVNLYGKCGRL 472
Query: 542 EEAFDFIKKMDFEPNEVIW-SVFIA-GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
EEA M + N + W S+ +A G HG+ L +L +KP A+L+
Sbjct: 473 EEAEAVFLGMK-KKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILV 530
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 125/247 (50%), Gaps = 21/247 (8%)
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD-----VVVGTALVNMYKKCGR 438
++ ++ ++ILT CS L AL +G+++H L ++ L D ++ ++ MY +CG
Sbjct: 6 IQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGC 65
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A VF M + +++WTS+I+ F A+ LF MLL+GV P+++TF L
Sbjct: 66 TDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLK 125
Query: 499 CSN--AGMVYEALGYFEMMQKEYK-IKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMD 552
S + + +MQ Y+ + VM+ +++M+ + G +E+A FD I+
Sbjct: 126 WSGRERNLDEGKRVHSHIMQTGYEGDRMVMN---LVVEMYGKCGDVEQAGNVFDSIQ--- 179
Query: 553 FEPNEVIWSVFIAGCRRHGN-ME-LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
+PN W++ IA ++G+ ME L + +KP D ++ +L + G E+
Sbjct: 180 -DPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKP-DGYTFTTVLGACTAVGALEEA 237
Query: 611 AVVKNLT 617
++ T
Sbjct: 238 KILHAAT 244
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 238/737 (32%), Positives = 383/737 (51%), Gaps = 66/737 (8%)
Query: 84 CVNR--KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
C+N SLS HAHI+KTG D + T L++ Y +A V D +P NV
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVF 80
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
S+++LI + + Q A+ F ML G P N L +A+ AC+ L +++ +Q+H
Sbjct: 81 SFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIA 140
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
+ D+ V +SL +Y C + A + F+R+ E +V+SW+ ++ A G +
Sbjct: 141 SVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAK 200
Query: 262 RFFSKMLSEGIQPN--------------------------------EFTLTSISSV---C 286
R FS+M G+QPN E T+ISSV
Sbjct: 201 RLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAV 260
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
G + L +G +H IK G S+ V ++++ +Y KC E ++FD M H+++ + N
Sbjct: 261 GDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCN 320
Query: 347 AMIAGHAQ---------MMDLAKDD--------------LSAHNG-GTEALSIFSKLNSS 382
A I G ++ + KD + NG EAL +F ++ +
Sbjct: 321 AFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIA 380
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G+KP+ T +L C + AL G+ H +L+ G +DV VG+AL++MY KCGRI+ +
Sbjct: 381 GVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQAS 440
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
F + T+ L+ W ++I G+A H + +A+++F+ M +G +P+ ++F L+ACS +
Sbjct: 441 RICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQS 500
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G+ E YF M +Y I+ ++HY C++ + R G +E+A+ I++M P+ +W
Sbjct: 501 GLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGA 560
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
++ CR H N+ LG AAE+L +L+P + +Y +L +I+ S G W +V V+++ + + L
Sbjct: 561 LLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGL 620
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF-----EL 677
+ SWI +K+KV+ D HPQ +I + LD+L + K GY + +F E
Sbjct: 621 RKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEE 680
Query: 678 TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRD 737
D+E HSEKLA+ FGLLNTP P+ V+K+ +C DCH IK I+S REI VRD
Sbjct: 681 QDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRD 740
Query: 738 SKRLHKFVNGHCTCRDF 754
+ R H F G C+C D+
Sbjct: 741 TNRFHHFKEGACSCGDY 757
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 213/466 (45%), Gaps = 86/466 (18%)
Query: 59 FQEALS----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F ALS +LT G S ++ C +L A +H +G D FV +
Sbjct: 95 FHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSS 154
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS-----------------QPE 157
LV++Y KC + +A +VFD + +VVSW++L++ Y + QP
Sbjct: 155 LVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPN 214
Query: 158 L------------------AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
L A+ +FLDM G P T+ + L A LE + +G IH
Sbjct: 215 LISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHG 274
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTC-------------------------------GSLNS 228
YV+K D V ++L +Y C G + S
Sbjct: 275 YVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVES 334
Query: 229 AIKAFNRIREK----NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+++ F +++++ NV+SWT++I C +NG ++ L F +M G++PN T+ +
Sbjct: 335 SLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLP 394
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
CG + +L G H ++ G ++++ V ++++ +Y KCG + ++ FDG+ NLV
Sbjct: 395 ACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVC 454
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WNA+IAG+A H EA+ IF + SG KPD+ +F+ +L+ CS+
Sbjct: 455 WNAVIAGYAM-----------HGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLT 503
Query: 405 EQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
E+G ++++ K G + V +V + + G++E+A + M
Sbjct: 504 EEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRM 549
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 6/197 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + E G K + + LL C N +L + + H ++ G D +V + L+
Sbjct: 369 EALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALI 428
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG ++ ++ FD +P N+V W ++I+GY + + + A+ +F M +G P +
Sbjct: 429 DMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDII 488
Query: 177 TLGTALTACSSLESIRLGK-QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ L+ACS G ++ KY E + +L S G L A R
Sbjct: 489 SFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRR 548
Query: 236 IR-EKNVMSWTTVIGAC 251
+ + W ++ +C
Sbjct: 549 MPVNPDACVWGALLSSC 565
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 235/700 (33%), Positives = 378/700 (54%), Gaps = 25/700 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL C +LS +H ++K G D FV L++ Y +CG ++ +K+FD + N
Sbjct: 136 LLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERN 195
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWTSLI+GY + A+ +F M EAG P VT+ ++AC+ L+ + LGK++ +
Sbjct: 196 VVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCS 255
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+ + E T + N+L +Y CG + +A + F+ KN++ + T++ + A
Sbjct: 256 YISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASD 315
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L +ML +G +P++ T+ S + C + L VG H+ ++ G + N+I+
Sbjct: 316 VLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIID 375
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA----------KDDLSAHNGG 369
+Y+KCG + A K+F+ M + +VTWN++IAG + D+ + DL + N
Sbjct: 376 MYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTM 435
Query: 370 T----------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
EA+ +F ++ + G+ D T I + C L AL+ + + K
Sbjct: 436 IGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDI 495
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
D+ +GTALV+M+ +CG A VF M R + +WT+ I A + A++LF +
Sbjct: 496 HVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNE 555
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
ML V+P+ V FV L ACS+ G V + F M+K + I+P + HY C++D+ R G
Sbjct: 556 MLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAG 615
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+EEA D I+ M EPN+V+W +A CR+H N+EL YAAE+L +L P+ + +L +
Sbjct: 616 LLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSN 675
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ SAG+W DVA V+ +E+ + + S I ++ ++ F D H ++ I +L+E
Sbjct: 676 IYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEE 735
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ + GY + L D +E HSEKLA+A+GL+ T PI VVK+ M
Sbjct: 736 INCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAMAYGLITTGQGIPIRVVKNLRM 795
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH+F K+++ L REI VRD+ R H F G C+CRD+
Sbjct: 796 CSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRDY 835
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 154/572 (26%), Positives = 262/572 (45%), Gaps = 56/572 (9%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCG 123
L E + +S LL VN K+L + +H ++K G H+ + L+ + G
Sbjct: 17 LKEANPITRNSSSKLL---VNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQIG 73
Query: 124 NMEE---AQKVF--DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
+E A+ F D+ ++ + LI GY + AI +++ ML G P T
Sbjct: 74 TLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTF 133
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L+ACS + ++ G Q+H V+K E D V NSL Y+ CG ++ K F+ + E
Sbjct: 134 PFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLE 193
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+NV+SWT++I + + + F +M G++PN T+ + S C + L +G +V
Sbjct: 194 RNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKV 253
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
S +LG + + N+++ +Y+KCG + A+++FD ++ NLV +N +++ +
Sbjct: 254 CSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVH---- 309
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
H ++ L I ++ G +PD T S + C++L L G+ HA L+ G
Sbjct: 310 -------HEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNG 362
Query: 419 FLSDVVVGTALVNMYKKCGR-------------------------------IERASRVFV 447
+ A+++MY KCG+ +E A R+F
Sbjct: 363 LEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFD 422
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
EM R L+SW +MI S+ +A++LF +M G+ ++VT VG +AC G +
Sbjct: 423 EMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDL 482
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
A ++K I + L+DMF R G A K+M+ + + W+ I
Sbjct: 483 AKWVCTYIEKN-DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVM 540
Query: 568 RRHGNMELGFYAAEQLL--KLKPKDCESYAML 597
GN E ++L K+KP D A+L
Sbjct: 541 AMEGNTEGAIELFNEMLEQKVKPDDVVFVALL 572
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 148/320 (46%), Gaps = 33/320 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L +GP+ + +S + C LS + HA++++ G + ++++Y KCG
Sbjct: 323 MLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGK 382
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL-- 182
E A KVF+++P VV+W SLI+G V++ ELA +F +MLE N +G +
Sbjct: 383 REAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQV 442
Query: 183 -----------------------------TACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+AC L ++ L K + Y+ K D +G
Sbjct: 443 SMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLG 502
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+L ++S CG +SA+ F R+ +++V +WT IG G + F++ML + ++
Sbjct: 503 TALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK 562
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVH-SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P++ ++ + C S+ G Q+ S+ G ++ ++ L + GL++EA
Sbjct: 563 PDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVD 622
Query: 333 LFDGMS-HVNLVTWNAMIAG 351
L M N V W +++A
Sbjct: 623 LIQSMPIEPNDVVWGSLLAA 642
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 24/208 (11%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA+ + E G + V + C +L A+ + +I K H D + T
Sbjct: 445 FEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTA 504
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+++ +CG+ A VF + + +V +WT+ I E AI +F +MLE P
Sbjct: 505 LVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPD 564
Query: 175 NVTLGTALTACSSLESIRLGKQ----------IHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
+V LTACS S+ G+Q I ++V Y + L G
Sbjct: 565 DVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHY---------GCMVDLLGRAG 615
Query: 225 SLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
L A+ + E N + W +++ AC
Sbjct: 616 LLEEAVDLIQSMPIEPNDVVWGSLLAAC 643
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 230/701 (32%), Positives = 385/701 (54%), Gaps = 26/701 (3%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
+L+ +T+ P+ S +LQ+C K L +HAH++KT D + ++
Sbjct: 12 SLTSITQFPENPKSL---ILQQCKTPKDLQQ---VHAHLLKTRRLLDPIITEAVLESAAL 65
Query: 122 C--GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
++ A +F+++ + ++ +I G P+ A+ +F M E T
Sbjct: 66 LLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFS 125
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L ACS ++++R G+Q+HA ++K + + V N+L +Y+ CG + A F+ + E+
Sbjct: 126 SVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER 185
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
++++W +++ +NG + ++ F K+L I+ ++ T+ S+ CG + +L +G +
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIG 245
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ G N + S++ +Y KCG VD A+KLFD M ++V W+AMI+G+AQ D
Sbjct: 246 EYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQA-DRC 304
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
K EAL++F ++ + P+ T S+L C+ L A E G+ +H K
Sbjct: 305 K----------EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKM 354
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
V +GT L++ Y KCG I+R+ VF EMS + + +WT++I G AN+ AL+ F
Sbjct: 355 KLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSS 414
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
ML V+PN VTF+G L+ACS+A +V + F M++++ I+P ++HY C++D+ R G
Sbjct: 415 MLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAG 474
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+EEA+ FI M F PN V+W +A CR H N+E+ + E + +L+P Y +L +
Sbjct: 475 FLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSN 534
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
+ GR ED V++L +E+++ + S I + V+ F DG H S EI LD+
Sbjct: 535 TYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDK 594
Query: 660 LVEKAKCFGY------KQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
++++ K GY + E+ E + E S S +HSEKLAIA+GL+ T + I + K+
Sbjct: 595 MMKQIKRLGYVPNTDDARLEAEEESKETSVS-HHSEKLAIAYGLIRTSPRTTIRISKNLR 653
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
MCRDCHN K I+ + R IIVRD R H F +G C+C D+
Sbjct: 654 MCRDCHNATKFISQVFERMIIVRDRNRFHHFKDGLCSCNDY 694
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/651 (34%), Positives = 359/651 (55%), Gaps = 20/651 (3%)
Query: 113 TFLVNVYGKCG----NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+L+N+ +C + + +F + + N+ W ++I G V N + AI + M
Sbjct: 46 NYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRS 105
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P N T L AC+ L ++LG +IH VVK + D V SL LY+ CG L
Sbjct: 106 EGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLED 165
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A K F+ I +KNV+SWT +I G+ + + F ++L + P+ FT+ + S C
Sbjct: 166 AHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQ 225
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ L G +H +++G N+ V S++ +Y KCG +++A+ +FDGM ++V+W AM
Sbjct: 226 LGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAM 285
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+A + L K EA+ +F ++ +KPD YT +L+ C+RL ALE GE
Sbjct: 286 IQGYA-LNGLPK----------EAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGE 334
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+ L + FL + V+GTAL+++Y KCG + RA VF M + + W ++I+G A +
Sbjct: 335 WVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNG 394
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ LF + G++P+ TF+G L C++AG+V E YF M + + + P ++HY
Sbjct: 395 YVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHY 454
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G ++EA I+ M E N ++W + CR H + +L A +QL++L+P
Sbjct: 455 GCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEP 514
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ +Y +L +I+ + +W++ A V+ E+++ + SWI + V+ F D HP
Sbjct: 515 WNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHP 574
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIV 703
S +I+ LDEL +K K GY F L D EE + HSEKLAIAFGL++
Sbjct: 575 LSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPT 634
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I VVK+ +C DCH IK+I+S+T REI VRD+ R H F G C+C D+
Sbjct: 635 AVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDY 685
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/344 (31%), Positives = 180/344 (52%), Gaps = 13/344 (3%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG ++ +L+ C L IH +VK G D FV T LV +Y KCG +E
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLE 164
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+A KVFD++P NVVSWT++ISGY+ + AI +F +LE P + T+ L+AC+
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACT 224
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L + G+ IH +++ + VG SL +Y+ CG++ A F+ + EK+++SW
Sbjct: 225 QLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGA 284
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I NG + + F +M E ++P+ +T+ + S C + +L +G V L +
Sbjct: 285 MIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNE 344
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ N + +++ LY KCG + A ++F GM + V WNA+I+G A
Sbjct: 345 FLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAM------------ 392
Query: 367 NGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
NG + + +F ++ G+KPD TF +L C+ +++G +
Sbjct: 393 NGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRR 436
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 388/713 (54%), Gaps = 51/713 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LLQ + KS S A+ +HA I++T + T L ++Y + ++ +F++LP
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTIL-SIYSNLNLLHDSLLIFNSLPSP 68
Query: 139 -NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
++W S+I Y + ++ F+ ML +G YP + + L +C+ ++ +R G+ +
Sbjct: 69 PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESV 128
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGS-----------------------------LNS 228
H +++ D N+L ++YS S L S
Sbjct: 129 HGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
K F + +++++SW TVI +NG L +M + ++P+ FTL+S+ +
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
++L G ++H I+ GY +++ + +S++ +Y KC VD++ ++F + + ++WN++
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSI 308
Query: 349 IAGHAQ--MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
IAG Q M D E L F ++ + +KP+ +FSSI+ C+ L L
Sbjct: 309 IAGCVQNGMFD-------------EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHL 355
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G+Q+H +++ F +V + +ALV+MY KCG I A +F +M ++SWT+MI G+A
Sbjct: 356 GKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYAL 415
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H ++ A+ LF+ M + GV+PN V F+ L ACS+AG+V EA YF M ++Y+I P ++
Sbjct: 416 HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLE 475
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY + D+ R+G +EEA++FI M EP +WS +A CR H N+EL +++L +
Sbjct: 476 HYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTV 535
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
P++ +Y +L +I+ +AGRW+D ++ R++ + + SWI IK+KV++F D
Sbjct: 536 DPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKS 595
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTP 701
HP I + L L+E+ + GY + L D EE Y HSE+LAI FG+++TP
Sbjct: 596 HPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIISTP 655
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I V K+ +C DCH K I+ + REI+VRD+ R H F +G C+C DF
Sbjct: 656 AGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDF 708
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/488 (25%), Positives = 236/488 (48%), Gaps = 54/488 (11%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L G + + S+L+ C K L E +H I++ G D + L+N+Y K
Sbjct: 95 IQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKF 154
Query: 123 GNMEEA-----------------------------QKVFDNLPRINVVSWTSLISGYVQN 153
++EE +KVF+ +P+ ++VSW ++ISG QN
Sbjct: 155 WSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQN 214
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
E A+ + +M A P + TL + L + ++ GK+IH Y ++ + D +G
Sbjct: 215 GMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIG 274
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+SL +Y+ C ++ + + F + + + +SW ++I C +NG +GL+FF +ML I+
Sbjct: 275 SSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIK 334
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN + +SI C + +L +G Q+H I+ + N+ + ++++ +Y KCG + A+ +
Sbjct: 335 PNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWI 394
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M ++V+W AMI G+A H +A+S+F ++ G+KP+ F +
Sbjct: 395 FDKMELYDMVSWTAMIMGYA-----------LHGHAYDAISLFKRMEVEGVKPNYVAFMA 443
Query: 394 ILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+LT CS +++ + +++T + + A+ ++ + GR+E A +M
Sbjct: 444 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE 503
Query: 453 TLIS-WTSMITGFANHSLSHQALQLFEDM--LLAGVRPNQVTFVGALAACSNAGMVYEAL 509
S W++++ H+ ++L E + L V P +GA SN +Y A
Sbjct: 504 PTGSVWSTLLAA----CRVHKNIELAEKVSKKLFTVDPQN---IGAYVLLSN---IYSAA 553
Query: 510 GYFEMMQK 517
G ++ +K
Sbjct: 554 GRWKDARK 561
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 236/700 (33%), Positives = 381/700 (54%), Gaps = 25/700 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL C + S +H +VK G +D FV L++ Y CG ++ +KVFD + N
Sbjct: 128 LLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERN 187
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWTSLI+GY + + A+ +F +M+E G P VT+ A++AC+ L+ + LGK++
Sbjct: 188 VVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCN 247
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+ + + +T V N+L +Y CG + + + F+ +KN++ + T++ ++G A +
Sbjct: 248 LMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGE 307
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L +ML +G +P++ T+ S + C + L VG H+ + G + N+I+
Sbjct: 308 VLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIID 367
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLSAHN-- 367
+Y+KCG + A K+FD MS+ +VTWN++IAG + ++ + +L + N
Sbjct: 368 MYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTM 427
Query: 368 -GGT-------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
G EA+ + ++ + G+K D T I + C L AL+ + I+ K
Sbjct: 428 IGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDI 487
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
D+ +GTALV+M+ +CG A RVF M R + +WT+ I A + A++LF++
Sbjct: 488 HIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDE 547
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
ML V+ + FV L A S+ G V + F M+K + + P + HY C++D+ R G
Sbjct: 548 MLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAG 607
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+EEAFD +K M +PN+VIW F+A CR+H N+E YA E++ +L P+ + +L +
Sbjct: 608 LLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSN 667
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ SAG+W DVA V+ +E+ + S I + + F D H ++A+I +L E
Sbjct: 668 IYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQE 727
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ + GY + L D +E HSEKLA+A+GL+NT PI VVK+ M
Sbjct: 728 INCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVVKNLRM 787
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH+F K+++ L REI VRD+ R H F G C+CRDF
Sbjct: 788 CSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDF 827
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 158/622 (25%), Positives = 275/622 (44%), Gaps = 102/622 (16%)
Query: 63 LSVLTEGPK---VQT-SSYVSLLQECVN--RKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
L T+ PK +QT + + L Q N +K + N + A V+ G+H+ + + +
Sbjct: 17 LPTTTQKPKNSSLQTCKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHES---LNYAL 73
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTN 175
N + + D + ++ + +LI GY + + AI ++L M+ G P N
Sbjct: 74 NAFKE-----------DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDN 122
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T L+ACS + + G Q+H VVK D V NSL Y+ CG ++ K F+
Sbjct: 123 FTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDE 182
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ E+NV+SWT++I A + + F +M+ G++PN T+ S C + L +G
Sbjct: 183 MLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELG 242
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+V +L +LG SN V N+++ +Y+KCG + +++FD S NLV +N +++ + Q
Sbjct: 243 KKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQ- 301
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H E L + ++ G +PD T S + C++L L G+ HA
Sbjct: 302 ----------HGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVF 351
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH-------- 467
+ G + A+++MY KCG+ E A +VF MS +T+++W S+I G
Sbjct: 352 RNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALR 411
Query: 468 -----------------------SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
S+ +A+ L +M G++ ++VT VG +AC G
Sbjct: 412 IFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGA 471
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG------------------------- 539
+ A + ++K I M L+DMF R G
Sbjct: 472 LDLAKWIYTYIEKN-DIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIR 530
Query: 540 --CIE-------EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLK 587
+E E FD + K D + ++ ++ + G ++ G F+A E++ +
Sbjct: 531 VKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVS 590
Query: 588 PKDCESYAMLLDIFVSAGRWED 609
P+ Y ++D+ AG E+
Sbjct: 591 PQIVH-YGCMVDLLGRAGLLEE 611
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 190/432 (43%), Gaps = 44/432 (10%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + V + C K L + + + + G + V+ L+++Y KCG+M
Sbjct: 218 GVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAV 277
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+++FD N+V + +++S YVQ+ + V +ML+ G P VT+ + + AC+ L
Sbjct: 278 REIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQL 337
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ +GK HAYV + E ++ N++ +Y CG +A K F+ + K V++W ++I
Sbjct: 338 GDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLI 397
Query: 249 GACGENGEAVQGLRFFS-------------------------------KMLSEGIQPNEF 277
+GE LR F +M ++GI+ +
Sbjct: 398 AGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRV 457
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
T+ I+S CG + +L + +++ K ++++ +++ ++ +CG A ++F+ M
Sbjct: 458 TMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENM 517
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
++ W A I A A+ +F ++ +K D + F ++LT
Sbjct: 518 EKRDVSAWTAAIRVKA-----------VEGNAKGAIELFDEMLKQDVKADDFVFVALLTA 566
Query: 398 CSRLVALEQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLI 455
S ++QG Q+ A+ G +V +V++ + G +E A + M + +
Sbjct: 567 FSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDV 626
Query: 456 SWTSMITGFANH 467
W S + H
Sbjct: 627 IWGSFLAACRKH 638
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 37/328 (11%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
E L VL E G + + +S + C LS + HA++ + G + + ++
Sbjct: 307 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 366
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG E A KVFD++ VV+W SLI+G V++ + ELA+ +F +M E+ N
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
Query: 177 TLGTAL-------------------------------TACSSLESIRLGKQIHAYVVKYQ 205
+G + +AC L ++ L K I+ Y+ K
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D +G +L ++S CG +A++ F + +++V +WT I G A + F
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFD 546
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL-GYASNLRVRNSIMYLYLKC 324
+ML + ++ ++F ++ + + G Q+ K+ G + + ++ L +
Sbjct: 547 EMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRA 606
Query: 325 GLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
GL++EA L M N V W + +A
Sbjct: 607 GLLEEAFDLMKSMPIKPNDVIWGSFLAA 634
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/638 (34%), Positives = 361/638 (56%), Gaps = 30/638 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + +V SW S+I+ + ++ A++ F M + +P T + +CSSL + G
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQIH + D V ++L +YS CG LN A K F+ I E+NV+SWT++I +N
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQN 165
Query: 255 GEAVQGLRFFSKML-----------SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
A + + F + L G+ + L + S C + V VH L +
Sbjct: 166 ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAV 225
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G+ L V N++M Y KCG + ++K+FDGM ++ +WN++IA +AQ
Sbjct: 226 KKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ--------- 276
Query: 364 SAHNG-GTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG EA S+FS + G ++ + T S++L C+ AL+ G+ IH +K
Sbjct: 277 ---NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELED 333
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
++VVGT++V+MY KCGR+E A + F + + + SWT M+ G+ H +A+++F +M+
Sbjct: 334 NLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMI 393
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G++PN +TFV LAACS+AG++ E +F M+ E+ ++P ++HY C++D+ R G +
Sbjct: 394 RCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYL 453
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA+ I++M +P+ ++W + CR H N+ELG +A +L KL P +C Y +L +I+
Sbjct: 454 KEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIY 513
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
AGRW+DV ++ L + L +T +S + K +V+ F D HPQ +I++ LDEL
Sbjct: 514 ADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELN 573
Query: 662 EKAKCFGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + GY + L D EE V HSEKLA+AFG++N+ S I ++K+ +C
Sbjct: 574 VKLQEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICG 633
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH IK+I+ + REI++RDSKR H F +G C+C D+
Sbjct: 634 DCHFAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDY 671
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 210/410 (51%), Gaps = 31/410 (7%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S++ ++ C + L + IH G D FV + L+++Y KCG + +A+K+FD
Sbjct: 87 STFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDE 146
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYP---------TNVTLGTALT 183
+P NVVSWTS+ISGYVQN + A+ +F + L + +Y +V LG ++
Sbjct: 147 IPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVIS 206
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ + + + +H VK E +VGN+L Y+ CG ++ + K F+ + E +V S
Sbjct: 207 ACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCS 266
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W ++I +NG +V+ FS M+ G ++ N TL+++ C +L++G +H
Sbjct: 267 WNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQV 326
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+K+ NL V SI+ +Y KCG V+ A+K FD + N+ +W M+AG+
Sbjct: 327 VKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGM-------- 378
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
H G EA+ +F ++ G+KP+ TF S+L CS L++G +K F D
Sbjct: 379 ---HGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFN-KMKCEF--D 432
Query: 423 VVVG----TALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
V G + +V++ + G ++ A + EM + I W S++ H
Sbjct: 433 VEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIH 482
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/647 (34%), Positives = 349/647 (53%), Gaps = 18/647 (2%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+++ Y + GN+ +K FD +P ++VSW +LI+ Y+ N + F ML G P
Sbjct: 1 MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V + L+AC+ I +G+ I ++ E+++ V +L S+Y G A F
Sbjct: 61 EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R+ ++V++W+ ++ A NG + L F +M +G+ PN+ TL S C ++ LR
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
GA +H G S + V +++ LY KCG ++ A + F + N+V W+A+ A +A+
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYAR 240
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ +A+ + +++ G+ P+ TF S+L C+ + AL+QG +IH T
Sbjct: 241 -----------NDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERT 289
Query: 415 --LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L G SDV V TALVNMY KCG + A +F +++ L+ W S+I A H + +
Sbjct: 290 QVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEK 349
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
AL+LFE M L G++P +TF L ACS+AGM+ + +F ++ I P +H+ C++
Sbjct: 350 ALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMV 409
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
D+ R G I ++ D + M FEP+ V W F+ CR + NM+ +AAE L +L P+
Sbjct: 410 DLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRA 469
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
Y +L +++ AGRW DVA ++ + + SWI +KD+V+ F D HP+ E
Sbjct: 470 PYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGE 529
Query: 653 IFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPIL 707
I L L + K GY L D +E YHSEKLA+AF LL TP SPI
Sbjct: 530 IHAELQRLTKLMKEAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIR 589
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
VVK+ +C DCH K I+ L REI+VRD R H+F NG C+C D+
Sbjct: 590 VVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDY 636
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 178/332 (53%), Gaps = 13/332 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L C + + ++ I I+ TG ++ V T LV++YGK G+ +A VF + +
Sbjct: 67 FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRD 126
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VV+W+++++ Y +N P A+ +F M G P VTL + L AC+SL +R G +H
Sbjct: 127 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 186
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V + VG +L +LY CG + +A++AF +I EKNV++W+ + A N
Sbjct: 187 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRD 246
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL--GYASNLRVRNSI 317
+R +M EG+ PN T S+ C + +L+ G ++H L G S++ V ++
Sbjct: 247 AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTAL 306
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y KCG + A +FD ++H++LV WN++IA +AQ H +AL +F
Sbjct: 307 VNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQ-----------HGQTEKALELFE 355
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
++ G++P + TF+S+L CS L+QG +
Sbjct: 356 RMRLEGLQPTIITFTSVLFACSHAGMLDQGRK 387
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 121/239 (50%), Gaps = 4/239 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P +LG + + +G + VS L C + L + ++H + G
Sbjct: 140 NGHPREALGLFRQMDL--DGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGV 197
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T LVN+YGKCG +E A + F + NVV+W+++ + Y +N + AI V M
Sbjct: 198 VVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLE 257
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIH--AYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P + T + L AC+++ +++ G++IH V+ E D V +L ++YS CG+L
Sbjct: 258 GLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLA 317
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A F++I +++ W ++I ++G+ + L F +M EG+QP T TS+ C
Sbjct: 318 LAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFAC 376
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/643 (33%), Positives = 361/643 (56%), Gaps = 17/643 (2%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
H +VK G D FV T L+++Y KCG ++ A +V+D + ++ + LIS Y +N
Sbjct: 136 HCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARNGFF 195
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
A VF+ + G P + T T L C ++ +I+ GKQ+HA+VVK Q +T+VGN+L
Sbjct: 196 VQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNAL 255
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+LYS CG + A F +R++N++SWT I ++G+ + L+ FS M GI+PNE
Sbjct: 256 LTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNE 315
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
FT + + + CG + G H+ IK G AS + V +I+ +Y G +DEA+K F
Sbjct: 316 FTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQ 375
Query: 337 MSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M + V+WNA+IAG+ + K A+ F ++ + + +T+S+I
Sbjct: 376 MGRAASNVSWNALIAGYVLNEKIEK-----------AMEAFCRMVKEDVACNEFTYSNIF 424
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
CS +L QIH+ +K+ S++ V ++L+ Y +CG +E A +VF ++S ++
Sbjct: 425 KACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVV 484
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW S+I ++ + +A+ L M+ G +P TF+ L+ACS++G+V E +F+ M
Sbjct: 485 SWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSM 544
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
++Y I+P H C++D+ R G +E A DFIKK+ +P IW +A CR + N+++
Sbjct: 545 VQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQM 604
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
Y AE++L L+P D Y L +++ GRW D + L ++++S+ SWI + +
Sbjct: 605 AEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNN 664
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE-----ESASVYHSEK 690
K+Y F +D HP+ ++++ L +LV + + GY + L E E +YHSEK
Sbjct: 665 KMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVLHPESRQPKEQLILYHSEK 724
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
LA+ FGLL+ P PI V+K+ +C DC++ +K I+ +T R I
Sbjct: 725 LAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRITDRYI 767
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 258/514 (50%), Gaps = 59/514 (11%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T A+ + ++ G+ +HA++V T L S Y+ CG L++A K F++I
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
N+ W + GAC G + L FS+M EG++PN+F L SI CG + R G
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD--------------------G 336
+H++ +K + S+ + ++++Y+Y KCG V++A ++FD G
Sbjct: 925 NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984
Query: 337 MSH---------------VNLVTWNAMIAGHAQMMDLAKDD----LSAHNG--------- 368
H N+V+WN +IAG +Q+ D + L NG
Sbjct: 985 FVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWT 1044
Query: 369 -----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
E F ++ G P T SS+L C+ + L G++IH +
Sbjct: 1045 SVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVI 1104
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G DV V +ALV+MY KCG I A +F M R ++W S+I G+ANH ++A++LF
Sbjct: 1105 GVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELF 1164
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M + + + +TF L ACS+AGMV F MQ++Y+I+P ++HY C++D+ R
Sbjct: 1165 NQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGR 1224
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G + EA+D IK M EP++ +W + CR HGN+EL AAE L +L+P+ S +L
Sbjct: 1225 AGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLL 1284
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
+++ AGRW + A +K + ++ K + SWI
Sbjct: 1285 SNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 229/464 (49%), Gaps = 21/464 (4%)
Query: 117 NVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLE------A 169
NV G ++ A +F+ P RI V S SG + + + F E
Sbjct: 48 NVVGGWVDLNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFG 107
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G +P + +AL+ C + LG++ H +VVK D V SL +Y+ CG ++SA
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
++ ++++ + + +I A NG VQ + F ++ + G +PN +T +++ +VCGT+
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+++ G Q+H+ +K+ Y S V N+++ LY KCG+++EA+ +F+ + N+++W A I
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASI 287
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G Q D K AL FS + SG++P+ +TFS +L C + G
Sbjct: 288 NGFYQHGDFKK-----------ALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRM 336
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHS 468
H +K G S V VGTA+++MY G ++ A + F +M + +SW ++I G+ +
Sbjct: 337 FHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNE 396
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+A++ F M+ V N+ T+ ACS+ + + + K ++ +
Sbjct: 397 KIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKS-NVESNLHVA 455
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
LI+ + + G +E A ++ + + V W+ I ++G+
Sbjct: 456 SSLIEAYTQCGSLENAVQVFTQIS-DADVVSWNSIIKAYSQNGD 498
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 214/437 (48%), Gaps = 16/437 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
FQ + + G + +Y ++L C ++ + +HAH+VK + V L+
Sbjct: 198 AFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLT 257
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG MEEA+ VF++L + N++SWT+ I+G+ Q+ + A+ F M E+G P T
Sbjct: 258 LYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFT 317
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI- 236
L +C ++ G+ H V+K VG ++ +YS G ++ A K F ++
Sbjct: 318 FSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMG 377
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
R + +SW +I N + + + F +M+ E + NEFT ++I C + SL
Sbjct: 378 RAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTV 437
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+HS IK SNL V +S++ Y +CG ++ A ++F +S ++V+WN++I ++Q
Sbjct: 438 QIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNG 497
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTL 415
D K A+ + K+ G KP TF ++L+ CS +++G++ ++
Sbjct: 498 DPWK-----------AIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQ 546
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQAL 474
+ + +V++ + G++E A +++ + S W ++ +S A
Sbjct: 547 DYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAE 606
Query: 475 QLFEDMLLAGVRPNQVT 491
+ E +L + PN T
Sbjct: 607 YVAEKIL--DLEPNDAT 621
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 193/466 (41%), Gaps = 83/466 (17%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
+ +Y + ++L +HAH+V G + + L++ Y +CG + A+K+FD
Sbjct: 803 SDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFD 862
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+P N+ W L + E A+ F +M + G P L + L AC L R
Sbjct: 863 KIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRT 922
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-------------- 239
G+ +H ++K E D + ++L +YS CG + A + F+ I +K
Sbjct: 923 GENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQ 982
Query: 240 ---------------------NVMSWTTVIGACGENGEAV-------------------- 258
NV+SW T+I + G+
Sbjct: 983 HGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVS 1042
Query: 259 ---------------QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
+G F +ML +G P+ T++S+ C + +LR G ++H +
Sbjct: 1043 WTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAM 1102
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+G ++ VR++++ +Y KCG + EA+ LF M N VTWN++I G+A
Sbjct: 1103 VIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYAN--------- 1153
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLKTGFLSD 422
H EA+ +F+++ S K D TF+++L CS +E GE + + K
Sbjct: 1154 --HGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPR 1211
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ +V++ + G++ A + M W +++ NH
Sbjct: 1212 LEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNH 1257
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 164/386 (42%), Gaps = 81/386 (20%)
Query: 59 FQEALSVLTEGPK--VQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EALS +E K ++ + +V S+L+ C + E +H I+K D ++++
Sbjct: 885 YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 944
Query: 115 LVNVYGKCGNMEEAQKVFDNL-----------------------------------PRIN 139
L+ +Y KCG++E+A +VFD + + N
Sbjct: 945 LIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPN 1004
Query: 140 VVSWTSL-----------------------------------ISGYVQNSQPELAIHVFL 164
VVSW +L ISG+VQN F
Sbjct: 1005 VVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFK 1064
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
+ML+ G P++VT+ + L AC+++ ++R GK+IH Y + E D V ++L +Y+ CG
Sbjct: 1065 EMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCG 1124
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
++ A F + E+N ++W ++I +G + + F++M + + T T++ +
Sbjct: 1125 YISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLN 1184
Query: 285 VCGTMLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNL 342
C + +G + + K L ++ L + G + EA L M +
Sbjct: 1185 ACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDK 1244
Query: 343 VTWNAMIA-----GHAQMMDLAKDDL 363
W A++ G+ ++ ++A + L
Sbjct: 1245 FVWGALLGACRNHGNIELAEVAAEHL 1270
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF +L +G + + SLL C N +L + + IH + + G +D +V + LV+
Sbjct: 1059 GFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVD 1118
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG + EA+ +F +P N V+W SLI GY + AI +F M E+ ++T
Sbjct: 1119 MYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLT 1178
Query: 178 LGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSA---IKAF 233
L ACS + LG+ + + KY+ E + L G L+ A IKA
Sbjct: 1179 FTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAM 1238
Query: 234 NRIREKNVMSWTTVIGACGENG 255
+K V W ++GAC +G
Sbjct: 1239 PVEPDKFV--WGALLGACRNHG 1258
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 25/285 (8%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T++ + + +R AL +G +HA + G L++ Y +CG++ A ++F ++
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ W + A +AL F +M G+RPNQ L AC G + +
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKAC---GHLSDRR 921
Query: 510 GYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFI 564
M K D Y+ LI M+ + G +E+A FD+I D V+ + +
Sbjct: 922 TGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDL----VVMNAMV 977
Query: 565 AGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
+G +HG + L Q +KP + S+ L+ F G V+ V L +
Sbjct: 978 SGYAQHGFVHEALBLVQKMQQAGVKP-NVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV 1036
Query: 623 SETDDWSWIR-IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
E D SW I V +F ++G F E++++ C
Sbjct: 1037 -EPDVVSWTSVISGFVQNFHNHEG--------FDAFKEMLDQGFC 1072
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 249/789 (31%), Positives = 396/789 (50%), Gaps = 105/789 (13%)
Query: 71 KVQTSSYVSLLQECVNRKSLSN--AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
+ + Y SLLQ C + +S A +HAH++ +G ++ L+++Y K + A
Sbjct: 8 RTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYA 67
Query: 129 QKVFDNLPRINVVSWTSLI---------------------------------SGYVQNSQ 155
+ +FD +P+ ++V+ T+LI + Y N
Sbjct: 68 RYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHD 127
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGN 214
AI +F DM P N T + L A + + E + +Q+H VVK T TSV N
Sbjct: 128 GHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLN 187
Query: 215 SLCSLYSTCGS---------LNSAIKAFNRIREKNVMSWTTVIGACGEN----------- 254
+L S Y C + + A K F+ + ++ +SWTT+I +N
Sbjct: 188 ALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLN 247
Query: 255 ---------------GEAVQGL-----RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
G A +GL F KM+ IQ +EFT TS+ SVC R+
Sbjct: 248 GTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRL 307
Query: 295 GAQVHSLGIKL----GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
G ++H+ +K + V N+++ Y KCG VD AQ++F+ M +LV+WN +++
Sbjct: 308 GKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILS 367
Query: 351 GHAQM--MDLAKD------------------DLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
G+ + MD AK L+ EAL F+++ G +P Y
Sbjct: 368 GYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYA 427
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
F+ + CS L +L+ G Q+HA ++ G+ S + G AL+ MY +CG ++ A +F+ M
Sbjct: 428 FAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP 487
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
ISW +MI H QA++LFE+ML G+ P++++F+ ++ACS+AG+V E
Sbjct: 488 CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRK 547
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YF+ M Y + P +HY +ID+ R G EA + ++ M FEP IW +AGCR H
Sbjct: 548 YFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIH 607
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
GN++LG AAE+L +LKP+ +Y +L +++ AG+W D+A V+ L R+ + + SW
Sbjct: 608 GNIDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSW 667
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEES-----ASV 685
I +++KV+SF D HP+ +I+ L++LV + + GY L D ES
Sbjct: 668 IEVENKVHSFLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELS 727
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLA+A+G + P + + V K+ +C DCHN K ++ + REI+VRD KR H F
Sbjct: 728 THSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFR 787
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 788 DGKCSCGDY 796
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/638 (34%), Positives = 355/638 (55%), Gaps = 16/638 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + L +H+++ K G D+ + L+++Y KCG++E A +F++ R
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV W ++ + Q + + +F M AG P T L C+ I LG+QIH
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ VK E D V L +YS G L A + ++EK+V+SWT++I ++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L F +M GI P+ L S S C + ++R G Q+H+ GY+ ++ + N+++
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG + EA F+ + H + +TWN +++G AQ H EAL +F +
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS--------GLHE---EALKVFMR 537
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ SG+K +++TF S L+ + L ++QG+QIHA +KTG + VG AL+++Y KCG
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
E A F EMS R +SW ++IT + H +AL LF+ M G++PN VTF+G LAA
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAA 657
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E L YF+ M EY I+P DHY C+ID+F R G ++ A FI++M + +
Sbjct: 658 CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM 717
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ C+ H N+E+G +AA+ LL+L+P D SY +L + + +W + V+ + R
Sbjct: 718 VWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMR 777
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + + SWI +K+ V++F D LHP + +I+ L + ++ GYKQ++
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFH 837
Query: 679 DEES-----ASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
D+E + HSEKLA+ FGL++ P P+ V+K+
Sbjct: 838 DKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKN 875
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 287/542 (52%), Gaps = 29/542 (5%)
Query: 60 QEALSVLTEGPK--VQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + + + V + YV S+L C + + +IHA K G + FV +
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +CG+ A++VF ++P + V++ +LISG+ Q E A+ +F +M +G P
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT+ + L AC+SL ++ G Q+H+Y+ K D + SL LY CG + +A+ FN
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
NV+ W ++ A G+ + + F +M + GI+PN+FT I C + +G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+HSL +K G+ S++ V ++ +Y K G +++A+++ + + ++V+W +MIAG+ Q
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ- 423
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H +AL+ F ++ G+ PD +S ++ C+ + A+ QG QIHA
Sbjct: 424 ----------HECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+G+ DV + ALVN+Y +CGRI A F E+ + I+W +++GFA L +AL+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDM 534
+F M +GV+ N TFV AL+A +N + + + +++ + + + + LI +
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--ALISL 591
Query: 535 FVRLGCIEEAFDFIKKMDF----EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
+ + G E+A KM+F E NEV W+ I C +HG +Q+ K +KP
Sbjct: 592 YGKCGSFEDA-----KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646
Query: 589 KD 590
D
Sbjct: 647 ND 648
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 258/481 (53%), Gaps = 23/481 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA V G + V L+++Y K G + A++VF+ L + VSW +++SGY QN
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ ++ M AG PT L + L++C+ E G+ IHA K+ + VGN+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +LY CGS A + F + ++ +++ T+I + G L F +M G+ P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T++S+ + C ++ L+ G Q+HS K G +S+ + S++ LY+KCG V+ A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
N+V WN M+ Q+ DLAK + +F ++ ++G++P+ +T+ IL
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-----------SFELFCQMQAAGIRPNQFTYPCIL 352
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ ++ GEQIH+L++KTGF SD+ V L++MY K G +E+A RV + + ++
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS--NA---GMVYEALG 510
SWTSMI G+ H AL F++M G+ P+ + A++ C+ NA G+ A
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Y + I + L++++ R G I EAF ++++ + +E+ W+ ++G +
Sbjct: 473 YVSGYSGDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQS 525
Query: 571 G 571
G
Sbjct: 526 G 526
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 213/401 (53%), Gaps = 13/401 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + +Y +L+ C + + E IH+ VKTG D +V L+++Y K G +E+A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++V + L +VVSWTS+I+GYVQ+ + A+ F +M + G +P N+ L +A++ C+ +
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++R G QIHA + D S+ N+L +LY+ CG + A +F I K+ ++W ++
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLV 519
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
++G + L+ F +M G++ N FT S S + ++ G Q+H+ IK G++
Sbjct: 520 SGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
V N+++ LY KCG ++A+ F MS N V+WN +I +Q H
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQ-----------HGR 628
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGT 427
G EAL +F ++ G+KP+ TF +L CS + +E+G +++ + G
Sbjct: 629 GLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA 688
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
+++++ + G+++RA + EM + W ++++ H
Sbjct: 689 CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 145/577 (25%), Positives = 256/577 (44%), Gaps = 69/577 (11%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC-SSLESIRL 193
+ R S ++G++ + P + +F D + AL AC + ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
+IHA V VGN L LYS G + A + F + ++ +SW ++ +
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG + L + +M G+ P + L+S+ S C G +H+ G K G+ S + V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ LYL+CG A+++F M H + VT+N +I+GHAQ G AL
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQC-----------GHGEHAL 229
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
IF ++ SG+ PD T SS+L C+ L L++G Q+H+ K G SD ++ +L+++Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A +F ++ W M+ F + ++ +LF M AG+RPNQ T+
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP 349
Query: 494 GALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
L C+ + G +L + + + V LIDM+ + G +E+A +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV------LIDMYSKYGWLEKARRVL 403
Query: 549 KKMDFEPNEVIWSVFIAGCRRH--------------------GNMEL--------GFYAA 580
+ + E + V W+ IAG +H N+ L G A
Sbjct: 404 EMLK-EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM 462
Query: 581 EQLLKLKPK--------DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
Q L++ + D + L++++ GR + + + E++ D+ +W
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR-----IREAFSSFEEIEHKDEITW-- 515
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ + S GLH ++ ++F +D+ K F +
Sbjct: 516 --NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL V G K ++VS L N + + IHA ++KTG + V L
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++YGKCG+ E+A+ F + N VSW ++I+ Q+ + A+ +F M + G P +
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT L ACS + + G + +Y + ++ G L+ A K
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708
Query: 235 RIR-EKNVMSWTTVIGAC 251
+ + M W T++ AC
Sbjct: 709 EMPIAADAMVWRTLLSAC 726
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/718 (32%), Positives = 390/718 (54%), Gaps = 52/718 (7%)
Query: 47 LNGNSEPVRSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK 102
+ G +E VR F EA+ + EG ++ + ++L+ V+ IHA I K
Sbjct: 111 IQGYAESVR---FLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFK 167
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
G + FV T L++ Y CG ++ A++VFD + ++VSWT +++ + +N + A+ +
Sbjct: 168 LGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKL 227
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F M G P N T + AC LE+ +GK +H +K + E D VG +L LY+
Sbjct: 228 FSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTK 287
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
G ++ A AF I +K+V+ W+ +I ++ ++ + + F +M + PN+FT S+
Sbjct: 288 SGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASV 347
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
C TM L +G Q+H IK+G S++ V N++M +Y KCG ++ + LF H N
Sbjct: 348 LQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRND 407
Query: 343 VT-WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
VT WN +I GH Q+ D G +AL +F + ++ T+SS L C+ L
Sbjct: 408 VTPWNTVIVGHVQLGD-----------GEKALRLFLNMLEYRVQATEVTYSSALRACASL 456
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
ALE G QIH+LT+KT F D+VV AL++MY KCG I+ A VF M+ + +SW +MI
Sbjct: 457 AALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMI 516
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+G++ H L AC+NAG++ + YF M +++ I
Sbjct: 517 SGYSMHGL----------------------------ACANAGLLDQGQAYFTSMIQDHGI 548
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
+P ++HY C++ + R G +++A I ++ F+P+ ++W + C H ++ELG +A+
Sbjct: 549 EPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQ 608
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
+L+++P+D ++ +L +++ +A RW++VA V+ + + + + SWI + V+SF
Sbjct: 609 HVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFT 668
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFG 696
D HP+ I +L+ L K K GY + ++ DEE + HSE+LA++FG
Sbjct: 669 VGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFG 728
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ TP SPI ++K+ +C DCH IK I+ + REI+VRD R H F G C+C D+
Sbjct: 729 IIRTPSGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDY 786
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 48/249 (19%)
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+ +++ L C + +G+ +H LK G D+ L+NMY K + AS++F E
Sbjct: 39 HAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDE 98
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA----------- 497
M R IS+ ++I G+A +A++LF + G N F L
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELG 158
Query: 498 ----AC-------SNAGM------VYEALGYFEMMQKEYK--IKPVMDHYMCLIDMFVRL 538
AC SNA + Y G ++ ++ + + M + ++ F
Sbjct: 159 WGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAEN 218
Query: 539 GCIEEAFDFIKKM---DFEPNEVIW-SVFIA--------------GCRRHGNMELGFYAA 580
C +EA +M F+PN + SVF A GC EL Y
Sbjct: 219 DCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVG 278
Query: 581 EQLLKLKPK 589
LL L K
Sbjct: 279 VALLDLYTK 287
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/713 (32%), Positives = 388/713 (54%), Gaps = 29/713 (4%)
Query: 59 FQEALSVLTEGP----KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ E +++ E ++ ++ + L C L +IHA I +G +
Sbjct: 22 YHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNS 81
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG ++ A+ VF++ ++ VSW SLI+GYV+ + + + + ML G
Sbjct: 82 LIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLN 141
Query: 175 NVTLGTALTACSS--LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+ LG+AL AC S SI GK +H VK + D VG +L Y+ G L A K
Sbjct: 142 SYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKI 201
Query: 233 FNRIREKNVMSWTTVIGACGE-----NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
F + + NV+ + +I + + A + + F +M S G++P+EFT +SI C
Sbjct: 202 FKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACS 261
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
T+ + G Q+H+ K S+ + N+++ LY G +++ K F +++V+W +
Sbjct: 262 TIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTS 321
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+I GH Q NG E L++F +L SG KPD +T S +L+ C+ L A++
Sbjct: 322 LIVGHVQ------------NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKS 369
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
GEQIHA +KTG + ++ + + MY KCG I+ A+ F E ++SW+ MI+ A
Sbjct: 370 GEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQ 429
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H + +A+ LFE M +G+ PN +TF+G L ACS+ G+V E L YFE+M+K++ I P +
Sbjct: 430 HGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVK 489
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
H C++D+ R G + EA FI FE + V+W ++ CR H + G AE++++L
Sbjct: 490 HSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIEL 549
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P+ SY +L +I+ AG ++NL ++ + + SWI + + V+SF D
Sbjct: 550 EPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRS 609
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQ----ESFELTDEESASV-YHSEKLAIAFGLLNTP 701
HP S I+ L+E++E+ K Y + ++ E ++++ V YHSEKLA+ FG+++ P
Sbjct: 610 HPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLP 669
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+P+ V+K+ C CH +K+ + L REII+RD R H+F +G C+C D+
Sbjct: 670 RSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDY 722
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/443 (32%), Positives = 219/443 (49%), Gaps = 18/443 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P+ NVVSW SLISGY Q +++F + + T AL+ C +RLG
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ IHA + + NSL +Y CG ++ A F E + +SW ++I
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML--SLRVGAQVHSLGIKLGYASNLR 312
G + LR KML G+ N + L S CG+ S+ G +H +KLG ++
Sbjct: 121 GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVV 180
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V +++ Y K G +++A K+F M N+V +NAMIAG QM +A D+ + EA
Sbjct: 181 VGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMA-DEFA-----NEA 234
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F ++ S GMKP +TFSSIL CS + A E G+QIHA K SD +G ALV +
Sbjct: 235 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 294
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y G IE + F ++SWTS+I G + L LF ++L +G +P++ T
Sbjct: 295 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 354
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFDFI 548
L+AC+N V E + Y IK + ++ + I M+ + G I+ A +
Sbjct: 355 SIMLSACANLAAVKSG----EQIHA-YAIKTGIGNFTIIQNSQICMYAKCGDIDSA-NMT 408
Query: 549 KKMDFEPNEVIWSVFIAGCRRHG 571
K P+ V WSV I+ +HG
Sbjct: 409 FKETKNPDIVSWSVMISSNAQHG 431
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 32/360 (8%)
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++NV+SW ++I + G + + F + ++ ++FT ++ SVCG L LR+G
Sbjct: 3 KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H+L G + + NS++ +Y KCG +D A+ +F+ ++ V+WN++IAG+ ++
Sbjct: 63 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI-- 120
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV--ALEQGEQIHALTL 415
E L + K+ G+ + Y S L C ++E G+ +H +
Sbjct: 121 ---------GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 171
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN-----HSLS 470
K G DVVVGTAL++ Y K G +E A+++F M ++ + +MI GF +
Sbjct: 172 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFA 231
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYM 529
++A+ LF +M G++P++ TF L ACS EA + + + +K D ++
Sbjct: 232 NEAMYLFFEMQSRGMKPSEFTFSSILKACS----TIEAFECGKQIHAQIFKYNLQSDEFI 287
Query: 530 --CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
L++++ G IE+ F K+D V W+ I G ++G E G +LL
Sbjct: 288 GNALVELYSLSGSIEDGLKCFHSTPKLDV----VSWTSLIVGHVQNGQFEGGLTLFHELL 343
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA-----G 503
M R ++SW S+I+G+ H+ + LF++ ++ +R ++ TF AL+ C G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ AL + PV+ LIDM+ + G I+ A + D E + V W+
Sbjct: 61 RLIHALITVSGLG-----GPVL-LTNSLIDMYCKCGRIDWARLVFESAD-ELDSVSWNSL 113
Query: 564 IAGCRRHGN 572
IAG R G+
Sbjct: 114 IAGYVRIGS 122
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/638 (34%), Positives = 355/638 (55%), Gaps = 16/638 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + L +H+++ K G D+ + L+++Y KCG++E A +F++ R
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV W ++ + Q + + +F M AG P T L C+ I LG+QIH
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ VK E D V L +YS G L A + ++EK+V+SWT++I ++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L F +M GI P+ L S S C + ++R G Q+H+ GY+ ++ + N+++
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG + EA F+ + H + +TWN +++G AQ H EAL +F +
Sbjct: 489 NLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQS--------GLHE---EALKVFMR 537
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ SG+K +++TF S L+ + L ++QG+QIHA +KTG + VG AL+++Y KCG
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
E A F EMS R +SW ++IT + H +AL LF+ M G++PN VTF+G LAA
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAA 657
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E L YF+ M EY I+P DHY C+ID+F R G ++ A FI++M + +
Sbjct: 658 CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM 717
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ C+ H N+E+G +AA+ LL+L+P D SY +L + + +W + V+ + R
Sbjct: 718 VWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMR 777
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + + SWI +K+ V++F D LHP + +I+ L + ++ GYKQ++
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFH 837
Query: 679 DEES-----ASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
D+E + HSEKLA+ FGL++ P P+ V+K+
Sbjct: 838 DKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKN 875
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 287/542 (52%), Gaps = 29/542 (5%)
Query: 60 QEALSVLTEGPK--VQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + + + V + YV S+L C + + +IHA K G + FV +
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +CG+ A++VF ++P + V++ +LISG+ Q E A+ +F +M +G P
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT+ + L AC+SL ++ G Q+H+Y+ K D + SL LY CG + +A+ FN
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
NV+ W ++ A G+ + + F +M + GI+PN+FT I C + +G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+HSL +K G+ S++ V ++ +Y K G +++A+++ + + ++V+W +MIAG+ Q
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ- 423
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H +AL+ F ++ G+ PD +S ++ C+ + A+ QG QIHA
Sbjct: 424 ----------HECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+G+ DV + ALVN+Y +CGRI A F E+ + I+W +++GFA L +AL+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALK 533
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDM 534
+F M +GV+ N TFV AL+A +N + + + +++ + + + + LI +
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--ALISL 591
Query: 535 FVRLGCIEEAFDFIKKMDF----EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
+ + G E+A KM+F E NEV W+ I C +HG +Q+ K +KP
Sbjct: 592 YGKCGSFEDA-----KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646
Query: 589 KD 590
D
Sbjct: 647 ND 648
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 258/481 (53%), Gaps = 23/481 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA V G + V L+++Y K G + A++VF+ L + VSW +++SGY QN
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ ++ M AG PT L + L++C+ E G+ IHA K+ + VGN+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +LY CGS A + F + ++ +++ T+I + G L F +M G+ P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T++S+ + C ++ L+ G Q+HS K G +S+ + S++ LY+KCG V+ A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
N+V WN M+ Q+ DLAK + +F ++ ++G++P+ +T+ IL
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-----------SFELFCQMQAAGIRPNQFTYPCIL 352
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ ++ GEQIH+L++KTGF SD+ V L++MY K G +E+A RV + + ++
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS--NA---GMVYEALG 510
SWTSMI G+ H AL F++M G+ P+ + A++ C+ NA G+ A
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Y + I + L++++ R G I EAF ++++ + +E+ W+ ++G +
Sbjct: 473 YVSGYSGDVSI------WNALVNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQS 525
Query: 571 G 571
G
Sbjct: 526 G 526
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 213/401 (53%), Gaps = 13/401 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + +Y +L+ C + + E IH+ VKTG D +V L+++Y K G +E+A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++V + L +VVSWTS+I+GYVQ+ + A+ F +M + G +P N+ L +A++ C+ +
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++R G QIHA + D S+ N+L +LY+ CG + A +F I K+ ++W ++
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLV 519
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
++G + L+ F +M G++ N FT S S + ++ G Q+H+ IK G++
Sbjct: 520 SGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
V N+++ LY KCG ++A+ F MS N V+WN +I +Q H
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQ-----------HGR 628
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGT 427
G EAL +F ++ G+KP+ TF +L CS + +E+G +++ + G
Sbjct: 629 GLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA 688
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
+++++ + G+++RA + EM + W ++++ H
Sbjct: 689 CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 146/577 (25%), Positives = 257/577 (44%), Gaps = 69/577 (11%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC-SSLESIRL 193
+ R S ++G++ + P + +F D + AL AC + ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
+IHA V VGN L LYS G + A + F + ++ +SW ++ +
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG + L + +M G+ P + L+S+ S C G +H+ G K G+ S + V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ LYL+CG A+++F M H + VT+N +I+GHAQ H G AL
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ---------CGH--GEHAL 229
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
IF ++ SG+ PD T SS+L C+ L L++G Q+H+ K G SD ++ +L+++Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A +F ++ W M+ F + ++ +LF M AG+RPNQ T+
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP 349
Query: 494 GALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
L C+ + G +L + + + V LIDM+ + G +E+A +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV------LIDMYSKYGWLEKARRVL 403
Query: 549 KKMDFEPNEVIWSVFIAGCRRH--------------------GNMEL--------GFYAA 580
+ + E + V W+ IAG +H N+ L G A
Sbjct: 404 EMLK-EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAM 462
Query: 581 EQLLKLKPK--------DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
Q L++ + D + L++++ GR + + + E++ D+ +W
Sbjct: 463 RQGLQIHARIYVSGYSGDVSIWNALVNLYARCGR-----IREAFSSFEEIEHKDEITW-- 515
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ + S GLH ++ ++F +D+ K F +
Sbjct: 516 --NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL V G K ++VS L N + + IHA ++KTG + V L
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++YGKCG+ E+A+ F + N VSW ++I+ Q+ + A+ +F M + G P +
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT L ACS + + G + +Y + ++ G L+ A K
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708
Query: 235 RIR-EKNVMSWTTVIGAC 251
+ + M W T++ AC
Sbjct: 709 EMPIAADAMVWRTLLSAC 726
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/706 (33%), Positives = 395/706 (55%), Gaps = 39/706 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S++ C + ++H I+K G + LV YGKCGN++ A ++F+ +
Sbjct: 227 TYASVVNACGSSGEEKYGAMVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERI 285
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACSSLESIRL 193
R +VVSW ++I+ Q + E A+ +F ML E P VT + L+A S L ++R
Sbjct: 286 SRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRC 345
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G++IHA++ + E DTS+ NSL + YS C + A + F R+ ++++SW +++ +
Sbjct: 346 GREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQ 405
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSI----SSVCGTMLSLRVGAQVHSLGIK--LGY 307
N + + F +M+ GI+P+ +LT I S ++ R G ++H ++
Sbjct: 406 NEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPG 465
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+L V N+I+ +Y K + +A+K+F GM + + +WNAM+ G+++
Sbjct: 466 GVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKF--------- 516
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD----- 422
+ L IF + G D + S +LT C RLV+L+ G+Q HA+ K D
Sbjct: 517 --EDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQD 574
Query: 423 --VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ + AL++MY KCG I+ A++VF++M + + SWT+MITG A+H L+ +ALQLFE M
Sbjct: 575 SLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERM 634
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
G++PNQVTF+ L AC++ G+V E YF+ M +Y + P ++HY C+ID+F R G
Sbjct: 635 KTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQ 694
Query: 541 IEEAFDFIK--KMDFEP--NEV--IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
+ A ++ F+P +++ +W V + C ++LG AA ++L+L+P+D +Y
Sbjct: 695 FDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATY 754
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ S+G WED V+ R++ L + SWI ++ + F D HPQ EI+
Sbjct: 755 ILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQRKEIY 814
Query: 655 KVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPIL-V 708
+ L +L + GY L T++E+ HSEKLA++FGLLN + + ++ V
Sbjct: 815 EKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGNGVIRV 874
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+ +C DCH+++K + L REI++RDS+R H F +G C+C D+
Sbjct: 875 MKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDY 920
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 256/525 (48%), Gaps = 32/525 (6%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + S SLL+ + + +H ++TG D + + +Y +CG
Sbjct: 112 MMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGV 171
Query: 125 MEEAQKVFD--NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
+E+AQ+VFD +L ++++ W S+I+ Y+ + + +F M+ G PT +T +
Sbjct: 172 LEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASV 231
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ AC S + G +H ++K E T++ NSL + Y CG+L A + F RI K+V
Sbjct: 232 VNACGSSGEEKYGAMVHGRIIKAGLE-ATNLWNSLVTFYGKCGNLQHASQLFERISRKDV 290
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLS--EGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+SW +I A + GE L F +ML +QPN T S+ S + +LR G ++H
Sbjct: 291 VSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIH 350
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ +L + + NS++ Y KC V +A+++F+ + ++++WN+M+AG+ Q
Sbjct: 351 AHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQG 410
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR----LVALEQGEQIHALTL 415
+ IF ++ SG++PD ++ + I SR L+ +G++IH L
Sbjct: 411 R-----------CFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYIL 459
Query: 416 K---TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+ G +S + V A++ MY K RI A ++F M R SW +M+ G++ ++
Sbjct: 460 RRITPGGVS-LSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFED 518
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK--PVMDHYM- 529
L +F D+L G + V+ L +C + + ++ K + + P D +
Sbjct: 519 VLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLS 578
Query: 530 ---CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI M+ + G I++A KM+ + W+ I GC HG
Sbjct: 579 INNALISMYSKCGSIKDAAQVFLKME-RKDVFSWTAMITGCAHHG 622
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 242/493 (49%), Gaps = 33/493 (6%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ++FDN P +V+SW++LI+ Y + A +F M+ G P +L + L S
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR--IREKNVMSWT 245
I L +Q+H + ++ D+ + + ++YS CG L A + F+ + +++ W
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I A +G V+ LR F KM+S G + P E T S+ + CG+ + GA VH IK
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 305 LGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
G A+NL NS++ Y KCG + A +LF+ +S ++V+WNAMIA + Q +
Sbjct: 254 AGLEATNL--WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGE------ 305
Query: 364 SAHNGGTEALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
G AL +F ++ ++P+ TF S+L+ S L AL G +IHA +
Sbjct: 306 -----GENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEV 360
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D + +L+ Y KC + +A +F + R +ISW SM+ G+ + + +F+ M+
Sbjct: 361 DTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMM 420
Query: 482 LAGVRPN--QVTFVGALAACSNAGMVY-----EALGYFEMMQKEYKIKPVMDHYMCLIDM 534
L+G+ P+ +T + A+ ++G++Y E GY ++++ + ++ M
Sbjct: 421 LSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGY--ILRRITPGGVSLSVSNAILKM 478
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCES 593
+ + I +A K M + W+ + G R+ E +LK P D S
Sbjct: 479 YAKFNRIADAEKIFKGMK-NRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVS 537
Query: 594 YAMLLDIFVSAGR 606
++LL S GR
Sbjct: 538 LSILL---TSCGR 547
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 145/280 (51%), Gaps = 17/280 (6%)
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A + F+ ++V+SW+ +I A G Q F KM+ EG+QPN F+L S+ V
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS--HVNLV 343
+ + + Q+H I+ G+ + +R + + +Y +CG++++AQ++FD S ++++
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLV 402
WN++IA + H E L +F K+ S G + P T++S++ C
Sbjct: 191 LWNSIIAAYI-----------FHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSG 239
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+ G +H +K G L + +LV Y KCG ++ AS++F +S + ++SW +MI
Sbjct: 240 EEKYGAMVHGRIIKAG-LEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIA 298
Query: 463 GFANHSLSHQALQLFEDMLLA--GVRPNQVTFVGALAACS 500
AL LF ML V+PN+VTF+ L+A S
Sbjct: 299 ANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVS 338
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/665 (32%), Positives = 359/665 (53%), Gaps = 18/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA +++ QD +++ ++ G+ ++ VF + N+ W ++I G V
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ AIH++ M G P N T+ L AC+ +RLG +IH+ +VK + D V S
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L SLY C + + A+K F+ I +KNV+SWT +I +G + + F K+L G++P+
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
F+L + + C + G + G N+ V S++ +Y+KCG ++ A +F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSI 394
M ++V+W+ MI G+A NG +AL +F ++ S +KPD YT +
Sbjct: 275 AMPEKDIVSWSTMIQGYA------------FNGLPQQALDLFFQMQSENLKPDCYTMVGV 322
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ C+ L AL+ G +L + FLS+ V+GTAL++MY KCG + +A +F M +
Sbjct: 323 LSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDR 382
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+ W +M+ G + + + LF + G+RP++ TF+G L C++ G V E +F
Sbjct: 383 VVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN 442
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M++ + + P ++HY C++D+ R G + EA I M +PN V+W + GC+ H +
Sbjct: 443 MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTH 502
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L ++L++L+P + +Y L +I+ RWE+ +++ +E+++ + SWI I
Sbjct: 503 LAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEID 562
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSE 689
V+ F D H S +I+ LDEL + K G+ F L D E YHSE
Sbjct: 563 GIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSE 622
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLA+AFGL+ +P I VVK+ +C DCH+ IK+I+ +T REII+RD+ R H F++G C
Sbjct: 623 KLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSC 682
Query: 750 TCRDF 754
+CRD+
Sbjct: 683 SCRDY 687
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 204/404 (50%), Gaps = 13/404 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L+ C + + IH+ +VK G D FV T L+++Y KC N ++A KVFD++P N
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWT++I+GY+ + AI F +LE G P + +L L AC+ L G+ I
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+ + V SL +Y CG+L A F+ + EK+++SW+T+I NG Q
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F +M SE ++P+ +T+ + S C T+ +L +G SL + + SN + +++
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG V +A ++F M + V WNAM+ G LS + S+FS +
Sbjct: 360 MYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVG-----------LSMNGHAKAVFSLFSLV 408
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGR 438
G++PD TF +L C+ + +G Q + L+ + +V++ + G
Sbjct: 409 EKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGL 468
Query: 439 IERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDML 481
+ A ++ M + + W +++ G H +H A Q+ + ++
Sbjct: 469 LNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 148/299 (49%), Gaps = 6/299 (2%)
Query: 59 FQEALS----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA+ +L G K + S V +L C ++ E I +I +G ++ FV T
Sbjct: 196 FREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATS 255
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCGN+E A +F +P ++VSW+++I GY N P+ A+ +F M P
Sbjct: 256 LLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPD 315
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T+ L+AC++L ++ LG + + + + + +G +L +YS CGS+ A + F
Sbjct: 316 CYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFT 375
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ K+ + W ++ NG A FS + GI+P+E T + C +
Sbjct: 376 AMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNE 435
Query: 295 GAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
G Q +++ ++ ++ L + GL++EA +L + M N V W A++ G
Sbjct: 436 GRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/665 (32%), Positives = 359/665 (53%), Gaps = 18/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA +++ QD +++ ++ G+ ++ VF + N+ W ++I G V
Sbjct: 35 IHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDC 94
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ AIH++ M G P N T+ L AC+ +RLG +IH+ +VK + D V S
Sbjct: 95 FDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTS 154
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L SLY C + + A+K F+ I +KNV+SWT +I +G + + F K+L G++P+
Sbjct: 155 LLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPD 214
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
F+L + + C + G + G N+ V S++ +Y+KCG ++ A +F
Sbjct: 215 SFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFS 274
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSI 394
M ++V+W+ MI G+A NG +AL +F ++ S +KPD YT +
Sbjct: 275 AMPEKDIVSWSTMIQGYA------------FNGLPQQALDLFFQMQSENLKPDCYTMVGV 322
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ C+ L AL+ G +L + FLS+ V+GTAL++MY KCG + +A +F M +
Sbjct: 323 LSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDR 382
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+ W +M+ G + + + LF + G+RP++ TF+G L C++ G V E +F
Sbjct: 383 VVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN 442
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M++ + + P ++HY C++D+ R G + EA I M +PN V+W + GC+ H +
Sbjct: 443 MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTH 502
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L ++L++L+P + +Y L +I+ RWE+ +++ +E+++ + SWI I
Sbjct: 503 LAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEID 562
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSE 689
V+ F D H S +I+ LDEL + K G+ F L D E YHSE
Sbjct: 563 GIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEEEKEHFLGYHSE 622
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLA+AFGL+ +P I VVK+ +C DCH+ IK+I+ +T REII+RD+ R H F++G C
Sbjct: 623 KLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRDTNRFHTFIDGSC 682
Query: 750 TCRDF 754
+CRD+
Sbjct: 683 SCRDY 687
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 204/404 (50%), Gaps = 13/404 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L+ C + + IH+ +VK G D FV T L+++Y KC N ++A KVFD++P N
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWT++I+GY+ + AI F +LE G P + +L L AC+ L G+ I
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+ + V SL +Y CG+L A F+ + EK+++SW+T+I NG Q
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F +M SE ++P+ +T+ + S C T+ +L +G SL + + SN + +++
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG V +A ++F M + V WNAM+ G LS + S+FS +
Sbjct: 360 MYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVG-----------LSMNGHAKAVFSLFSLV 408
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGR 438
G++PD TF +L C+ + +G Q + L+ + +V++ + G
Sbjct: 409 EKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGL 468
Query: 439 IERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDML 481
+ A ++ M + + W +++ G H +H A Q+ + ++
Sbjct: 469 LNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLI 512
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 149/299 (49%), Gaps = 6/299 (2%)
Query: 59 FQEALS----VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA+ +L G K + S V +L C ++ E I +I +G ++ FV T
Sbjct: 196 FREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATS 255
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCGN+E A +F +P ++VSW+++I GY N P+ A+ +F M P
Sbjct: 256 LLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPD 315
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T+ L+AC++L ++ LG + + + + + +G +L +YS CGS+ A + F
Sbjct: 316 CYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFT 375
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+++K+ + W ++ NG A FS + GI+P+E T + C +
Sbjct: 376 AMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNE 435
Query: 295 GAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
G Q +++ ++ ++ L + GL++EA +L + M N V W A++ G
Sbjct: 436 GRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGG 494
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/687 (32%), Positives = 379/687 (55%), Gaps = 23/687 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKT--GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ LL+ + K+L ++IHAH++ T + + + L+N+Y KC + A+ +FD +
Sbjct: 29 IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY--PTNVTLGTALTACSSLESIRL 193
+ NVVSW +L++GY N + +F M+ +Y P T +++CS +
Sbjct: 89 RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISV-DYMRPNEYIFATIISSCSDSGQVVE 147
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G Q H Y +K V N+L +YS + A+ + + +V S+ +I E
Sbjct: 148 GWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLE 207
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG + L +M+ E I + T + +C + LR+G QVH + G + V
Sbjct: 208 NGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFV 267
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEA 372
++I+ +Y KCG + A+K+F+ + N+V+W A++A ++Q NG EA
Sbjct: 268 SSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQ------------NGCFEEA 315
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L+ F ++ G+ P+ YTF+ +L C+ + AL G+ +H K+GF ++VG AL+NM
Sbjct: 316 LNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINM 375
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K G IE A +VF+EM R I+W++MI G ++H L +AL +F++ML A P+ VTF
Sbjct: 376 YSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTF 435
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
VG L+AC++ G V E Y + K+ I+P ++HY C++ + + G ++EA +F+K
Sbjct: 436 VGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTP 495
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+ + V W ++ C H N LG AE +L++ P D +Y +L +++ A RW+ V
Sbjct: 496 VKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVK 555
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
++ L RE + + SWI I++ ++ F HP+S +I++ + EL+ + GY
Sbjct: 556 IRKLMRERNVKKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPD 615
Query: 673 ES---FELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
+ ++ DE+ YHSEKLAIA+GL+ TP +PI V+K+ MC DCH+ +K+I+
Sbjct: 616 IAAVFHDVEDEQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISK 675
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T R IIVRD+ R H F +G C+C D+
Sbjct: 676 VTNRMIIVRDANRFHCFGDGGCSCADY 702
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 213/409 (52%), Gaps = 16/409 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ +++ C + + H + +K+G +V L+ +Y + +++ A V+ +P
Sbjct: 132 FATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVP 191
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++V S+ +I+G ++N P A+ V M++ NVT TA CS L+ +RLG Q
Sbjct: 192 GLDVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQ 251
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H + + E D+ V +++ +Y CG++ +A K FNR++ KNV+SWT ++ A +NG
Sbjct: 252 VHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGC 311
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L FF +M +G+ PNE+T + + C + +L G +H+ K G+ ++ V N+
Sbjct: 312 FEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNA 371
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G ++ A K+F M + +TW+AMI G LS H G EAL +F
Sbjct: 372 LINMYSKSGSIEAAHKVFLEMICRDSITWSAMICG-----------LSHHGLGREALVVF 420
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKK 435
++ ++ P TF +L+ C+ L ++++G ++ L +TG V T +V + K
Sbjct: 421 QEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCK 480
Query: 436 CGRIERASRVFVEMSTR-TLISWTSMITG---FANHSLSHQALQLFEDM 480
GR++ A + +++W ++++ N+ L + +L M
Sbjct: 481 AGRLDEAENFMKSTPVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQM 529
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 143/278 (51%), Gaps = 2/278 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YV+ C + K L +H + +TG+ D FV + ++++YGKCGN+ A+KVF+ L
Sbjct: 232 TYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRL 291
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
NVVSWT++++ Y QN E A++ F +M G P T L +C+ + ++ GK
Sbjct: 292 QTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGK 351
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+H + K ED VGN+L ++YS GS+ +A K F + ++ ++W+ +I +G
Sbjct: 352 LLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHG 411
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVR 314
+ L F +ML+ P+ T + S C + S++ G ++ L + G +
Sbjct: 412 LGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHY 471
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
I+ L K G +DEA+ ++V W +++
Sbjct: 472 TCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLSA 509
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/692 (31%), Positives = 375/692 (54%), Gaps = 16/692 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +V ++L+ + + A +H+ K G + FV + L++ Y C + +
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF+ + R + V WT+++S Y +N PE A VF M +G P L + L A
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC 275
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ LGK IH +K + + VG +L +Y+ CG + A AF I +V+ + +
Sbjct: 276 LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFM 335
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I ++ + Q F +++ + PNE++L+S+ C M+ L G Q+H+ IK+G+
Sbjct: 336 ISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 395
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+L V N++M Y KC +D + K+F + N V+WN ++ G +Q
Sbjct: 396 ESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ-----------SG 444
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EALS+F ++ ++ M T+SS+L C+ ++ QIH K+ F +D V+G
Sbjct: 445 LGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN 504
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+L++ Y KCG I A +VF + R +ISW ++I+G+A H + AL+LF+ M + V
Sbjct: 505 SLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVES 564
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N +TFV L+ CS+ G+V L F+ M+ ++ IKP M+HY C++ + R G + +A F
Sbjct: 565 NDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQF 624
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I + P+ ++W ++ C H N+ LG ++AE++L+++P+D +Y +L +++ +AG
Sbjct: 625 IGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSL 684
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ VA+++ R + + SW+ IK ++++F HP I +L+ L K
Sbjct: 685 DQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSRE 744
Query: 668 GYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY + L D E+ + HSE+LA+A+GL+ TP PI ++K+ C DCH
Sbjct: 745 GYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAF 804
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+I+ + REIIVRD R H F +G C+C D+
Sbjct: 805 TVISKIVKREIIVRDINRFHHFEDGKCSCGDY 836
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 252/513 (49%), Gaps = 17/513 (3%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVY 119
+L++L P V + + LQ C+ R +H H+V+ G D F L+N+Y
Sbjct: 47 SLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMY 106
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
GK G + A+++FD +P N+VS+ +L+ + Q E A +F + G+ L
Sbjct: 107 GKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLT 166
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T L ++++ L +H+ K + + VG+ L YS C ++ A FN I K
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ + WT ++ EN R FSKM G +PN F LTS+ + S+ +G +H
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
IK + V +++ +Y KCG + +A+ F+ + + +++ + MI+ +AQ
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ----- 341
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
N +A +F +L S + P+ Y+ SS+L C+ +V L+ G+QIH +K G
Sbjct: 342 ------SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 395
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
SD+ VG AL++ Y KC ++ + ++F + +SW +++ GF+ L +AL +F +
Sbjct: 396 ESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCE 455
Query: 480 MLLAGVRPNQVTFVGALAAC-SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M A + QVT+ L AC S A + + + + + + V+ + LID + +
Sbjct: 456 MQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKC 513
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G I +A + + E + + W+ I+G HG
Sbjct: 514 GYIRDALKVFQHL-MERDIISWNAIISGYALHG 545
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 382/715 (53%), Gaps = 28/715 (3%)
Query: 49 GNSEPVRSLG-----FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV-K 102
G SE +S G F L + KV S++++L C N ++L IH+ I+ +
Sbjct: 410 GASEDRKSFGKVVNTFHHMLLAGIDPNKV---SFIAILNACSNSEALDFGRKIHSLILTR 466
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAI 160
+ + V T LV++YGKCG++ EA+ VF LP ++V+W ++ Y QN + + A
Sbjct: 467 RRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAF 526
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
++ML+ G P ++ + L++C + Q+ + + +L S++
Sbjct: 527 GALMEMLQGGVLPDALSFTSVLSSCYCSQE----AQVLRMCILESGYRSACLETALISMH 582
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
C L A F+ + +V+SWT ++ A EN + + F +M EG+ P++FTL
Sbjct: 583 GRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLA 642
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
+ C +L +G +H+ ++G +++ V N+++ +Y CG EA F+ M
Sbjct: 643 TTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR 702
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+LV+WN M A +AQ LAK EA+ +F + G+KPD TFS+ L +
Sbjct: 703 DLVSWNIMSAAYAQA-GLAK----------EAVLLFRHMQLEGVKPDKLTFSTTLNVSGG 751
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ G+ H L ++G SDV V T LV +Y KCG+++ A +F T++ ++
Sbjct: 752 SALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAI 811
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I A H S +A+++F M GVRP+ T V ++AC +AGMV E F M++ +
Sbjct: 812 IGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFG 871
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
I P ++HY C +D+ R G +E A I+KM FE N ++W+ + C+ G+ ELG A
Sbjct: 872 ISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCA 931
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
+++L+L P + ++ +L +I+ + G+W+D V + ++ + SW+ I +V+ F
Sbjct: 932 QRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEF 991
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE--ESASVYHSEKLAIAFGLL 698
D HPQ+ EI+ VLD+L + GY+ + + DE E A YHSE++AIAFGL+
Sbjct: 992 VAGDRSHPQTDEIYVVLDKLELLMRRAGYEADKGLDAEDELKEKALGYHSERIAIAFGLI 1051
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
TP + + +VK+ +C DCH K I+ + REIIVRDS R H F NG C+C+D
Sbjct: 1052 ATPPDTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKD 1106
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/528 (31%), Positives = 269/528 (50%), Gaps = 40/528 (7%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y +LLQ CV+ L+ + H I G Q F+ L+N+Y +CG++EEA +F +
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGK 195
NVVSWT+LIS Q+ A +F M LE+ P + TL L AC++ + +G+
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147
Query: 196 QIHAYVVKYQTEDDTS----VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
IHA + + E +++ VGN++ ++Y+ CGS AI F I EK+V+SWT + GA
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207
Query: 252 GENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ LR F +ML + + PN T + C SLR G +HSL + G +
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFD 264
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS---HVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N+++ +Y KCG + A +F M+ ++LV+WNAMI+ + + +
Sbjct: 265 PLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVE---------AGRH 315
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSIL-TICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +A++IF +L GM+P+ T +IL + + V + H ++G+L DVVVG
Sbjct: 316 G--DAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVG 373
Query: 427 TALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
A+++MY KCG A VF + + +ISW +M+ + + + F MLLAG+
Sbjct: 374 NAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGI 433
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMM-------QKEYKIKPVMDHYMCLIDMFVRL 538
PN+V+F+ L ACSN+ EAL + + +++Y V L+ M+ +
Sbjct: 434 DPNKVSFIAILNACSNS----EALDFGRKIHSLILTRRRDYVESSVA---TMLVSMYGKC 486
Query: 539 GCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLK 585
G I EA K+M ++ W+V + ++ + F A ++L+
Sbjct: 487 GSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQ 534
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
DL ++++L C L +G++ H L G + +G L+NMY +CG +E A +F
Sbjct: 24 DLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIF 83
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNA--- 502
+M R ++SWT++I+ A +A LF MLL + PN T V L AC+N+
Sbjct: 84 SKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDL 143
Query: 503 --GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
G A+ + +++E ++ + M I+M+ + G E+A
Sbjct: 144 AIGRSIHAMIWELGLERESTTATLVGNAM--INMYAKCGSPEDAI 186
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/686 (34%), Positives = 377/686 (54%), Gaps = 36/686 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+ +C N+KSL+ + +H HI+K+GS FF L++ Y KC + EA+K+FD +P
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHK-LIDGYIKCSVITEARKLFDEMP 62
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++V+W S+IS +V + + AI ++ +ML G P T A S + R G++
Sbjct: 63 NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQK 122
Query: 197 IHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
H V E D V + +Y+ G + A F+R+ +K+V+ +T +I ++G
Sbjct: 123 AHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHG 182
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L F M+ I+PNE+TL S+ CG + L G +H L +K G S + +
Sbjct: 183 LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQT 242
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALS 374
S++ +Y KC +V+++ K+F+ +++ + VTW + I G Q NG E ALS
Sbjct: 243 SLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQ------------NGREEVALS 290
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ + P+ +T SSIL CS L LE GEQIHA+T+K G + V AL+++Y
Sbjct: 291 MFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYG 350
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG +E+A VF ++ ++S +MI +A + H+AL+LFE + G+ PN VTF+
Sbjct: 351 KCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFIS 410
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC+NAG+V E F +++ + I+ DHY C+ID+ R EEA I++
Sbjct: 411 ILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-N 469
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ + W + C+ HG +E+ +++L P+D ++ +L +I+ SAG+W++V +K
Sbjct: 470 PDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMK 529
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ R+ +L +T SW+ I +V++F D HP++ EI ++L EL+EK GY
Sbjct: 530 SAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTK 589
Query: 675 FELTDEE-----SASVYHSEKLAIAFGLLNT-PIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D E SA YHSEKLAIAF L T + I + K+ +C D
Sbjct: 590 FVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGD----------- 638
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
II RD+KR H F G C+C+D+
Sbjct: 639 ---YIIARDAKRFHHFKGGICSCKDY 661
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/671 (33%), Positives = 376/671 (56%), Gaps = 55/671 (8%)
Query: 92 NAEIIHAH-IVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ EI HA + + +D F ++++Y K G +E+ + +FDN+P + VS+ ++ISG+
Sbjct: 71 SGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGF 130
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
N + A+ VFL M + G PT T + L AC+ L +R GKQIH ++ +
Sbjct: 131 AGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNV 190
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
V N+L LY+ CG ++ A + F+R+ +NV++W +I +N + + + F +M
Sbjct: 191 FVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVS 250
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
++P++ T +S+ +GA Y++ G +DEA
Sbjct: 251 NLKPDQVTASSV-----------LGA------------------------YIQAGYIDEA 275
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLY 389
+K+F + + V W MI G AQ NG E AL +FS++ +PD Y
Sbjct: 276 RKVFGEIREKDEVCWTIMIVGCAQ------------NGKEEDALLLFSEMLLENARPDGY 323
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T SS+++ C++L +L G+ +H G D++V +ALV+MY KCG A +F M
Sbjct: 324 TISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTM 383
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
TR ++SW SMI G+A + +AL L+E+ML ++P+ VTFVG L+AC +AG+V E
Sbjct: 384 QTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGK 443
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
YF M ++ ++P DHY C++++F R G +++A D I M EPN +IW+ ++ C
Sbjct: 444 EYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVM 503
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
G+++ G AA L++L P + Y ML +++ + GRW+DVA +++L + + + + +S
Sbjct: 504 KGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYS 563
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL----TDEESASV 685
WI I ++V+ F +D HP + I L+ L+ K + G+ + L DE+ S+
Sbjct: 564 WIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFGEDEKLESI 623
Query: 686 -YHSEKLAIAFGLLNTPI-VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
YHSEKLA+A+GL+ P V+PI ++K+ C DCH F+K ++++T R +I+RDS R H
Sbjct: 624 NYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVILRDSNRFHH 683
Query: 744 FVNGHCTCRDF 754
FV G C+C+D+
Sbjct: 684 FVEGKCSCKDY 694
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 202/417 (48%), Gaps = 52/417 (12%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
GN +LG L + EG K ++VS+L C L + IH I+ +
Sbjct: 132 GNGRGGPALGV--FLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGN 189
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV L ++Y +CG +++A+++FD + NVV+W +ISGY++N QPE I +F +M
Sbjct: 190 VFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQV 249
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
+ P VT + L A Y G ++
Sbjct: 250 SNLKPDQVTASSVLGA-----------------------------------YIQAGYIDE 274
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A K F IREK+ + WT +I C +NG+ L FS+ML E +P+ +T++S+ S C
Sbjct: 275 ARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAK 334
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ SL G VH +G +L V ++++ +Y KCG+ +A +F M N+V+WN+M
Sbjct: 335 LASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSM 394
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG- 407
I G+A L DL EALS++ + +KPD TF +L+ C +E+G
Sbjct: 395 IGGYA----LNGQDL-------EALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGK 443
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR--TLISWTSMIT 462
E +++ + G +VN++ + G +++A + MS +LI WT++++
Sbjct: 444 EYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLI-WTTVLS 499
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L E + + S++ C SL + +++H G + D V + LV++Y KCG
Sbjct: 313 MLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGV 372
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+A +F + NVVSW S+I GY N Q A+ ++ +MLE P +VT L+A
Sbjct: 373 TRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSA 432
Query: 185 CSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVM 242
C + GK+ + ++ E + +L+ G ++ A+ + + +E N +
Sbjct: 433 CVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSL 492
Query: 243 SWTTVIGACGENGEAVQG 260
WTTV+ C G+ G
Sbjct: 493 IWTTVLSVCVMKGDIKHG 510
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 151/353 (42%), Gaps = 62/353 (17%)
Query: 398 CSRLVALEQGEQIHA-LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C R ++Q +++ + + L +D + L+N+Y K G I A ++F EM+ R S
Sbjct: 32 CFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFS 91
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W +M++ +A L +F++M + V++ ++ + G ALG F MQ
Sbjct: 92 WNAMLSLYAKSGLVEDLRVIFDNM----PSRDSVSYNTVISGFAGNGRGGPALGVFLRMQ 147
Query: 517 KEYKIKP--------------VMD-------H------------YMC--LIDMFVRLGCI 541
KE +KP ++D H ++C L D++ R G I
Sbjct: 148 KE-GLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEI 206
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAMLLD 599
++A +M N V W++ I+G ++ E + + Q+ LKP D + + +L
Sbjct: 207 DQARRLFDRMVIR-NVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKP-DQVTASSVLG 264
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSW-IRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
++ AG ++ V RE+ D+ W I I + K D L +
Sbjct: 265 AYIQAGYIDEARKVFGEIREK-----DEVCWTIMIVGCAQNGKEEDAL-------LLFSE 312
Query: 659 ELVEKAKCFGYKQQESFELTDEESASVYHSEKL---AIAFGLLNTPIVSPILV 708
L+E A+ GY S + + AS+YH + + A G+ + +VS LV
Sbjct: 313 MLLENARPDGY-TISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALV 364
>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
Length = 652
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/652 (34%), Positives = 349/652 (53%), Gaps = 18/652 (2%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F+ L+++Y KC ++A VF + NV SWT +++ + +N + F ML
Sbjct: 11 FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P V + L+AC+ I +G+ I ++ E+++ V +L SLY G A
Sbjct: 71 GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDA 130
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F R+ ++V++W+ ++ A NG + L F +M +G+ PN+ TL S C ++
Sbjct: 131 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
LR GA +H G S + V +++ LY KCG ++ A + F + N+V W+A+
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAIS 250
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
A +A+ ++ +A+ + +++ G+ P+ TF S+L C+ + AL+QG +
Sbjct: 251 AAYAR-----------NDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRR 299
Query: 410 IHAL--TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
IH L G SDV V TALVNMY KCG + A +F +++ L+ W S+I A H
Sbjct: 300 IHERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQH 359
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+ +AL+LFE M L G++P +TF L ACS+AGM+ + +F ++ I P +H
Sbjct: 360 GQTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEH 419
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
+ C++D+ R G I ++ D + M FEP+ V W F+ CR + NM+ +AAE L +L
Sbjct: 420 FGCMVDLLGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLD 479
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
P+ Y +L +++ AGRW DVA ++ + + SWI +KD+V+ F D H
Sbjct: 480 PRKRAPYVLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDH 539
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPI 702
P+ EI L L + K GY L D +E+ YHSEKLA+AF LL TP
Sbjct: 540 PRIGEIHAELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPE 599
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
SPI VVK+ +C DCH K I+ L REI+VRD R H+F NG C+C D+
Sbjct: 600 GSPIRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDY 651
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 177/332 (53%), Gaps = 13/332 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L C + + ++ I I+ TG ++ V T LV++YGK G+ +A VF + +
Sbjct: 82 FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRD 141
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VV+W+++++ Y +N P A+ +F M G P VTL + L AC+SL +R G +H
Sbjct: 142 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 201
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V + VG +L +LY CG + +A +AF +I EKNV++W+ + A N
Sbjct: 202 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRD 261
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL--GYASNLRVRNSI 317
+R +M EG+ PN T S+ C + +L+ G ++H L G S++ V ++
Sbjct: 262 AIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTAL 321
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y KCG + A +FD ++H++LV WN++IA +AQ H +AL +F
Sbjct: 322 VNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQ-----------HGQTEKALELFE 370
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
++ G++P + TF+S+L CS L+QG +
Sbjct: 371 RMRLEGLQPTIITFTSVLFACSHAGMLDQGRK 402
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 4/239 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P +LG + + +G + VS L C + L + ++H + G
Sbjct: 155 NGHPREALGLFRQMDL--DGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGV 212
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T LVN+YGKCG +E A + F + NVV+W+++ + Y +N + AI V M
Sbjct: 213 VVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLE 272
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHA--YVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P + T + L AC+++ +++ G++IH +V+ E D V +L ++YS CG+L
Sbjct: 273 GLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLA 332
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A F++I +++ W ++I ++G+ + L F +M EG+QP T TS+ C
Sbjct: 333 LAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFAC 391
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 19/270 (7%)
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+LG+ N + N ++ LY KC D+A +F G+ N+ +W M+A A+ D + L
Sbjct: 3 ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
F + G+ P S L+ C+ + G I L TG +
Sbjct: 63 -----------FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEES 111
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+V TALV++Y K G A+ VF+ MS R +++W++M+ +A + +AL LF M L
Sbjct: 112 IVQTALVSLYGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLD 171
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGC 540
GV PN+VT V L AC++ G + +M + + + + + L++++ + G
Sbjct: 172 GVAPNKVTLVSGLDACASLGDLRSG----ALMHQRVEAQGIQSGVVVGTALVNLYGKCGR 227
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
IE A + ++ E N V WS A R+
Sbjct: 228 IEAAAEAFGQI-VEKNVVAWSAISAAYARN 256
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G++ + + L+++Y KC R + A VF + ++ + SWT M+ FA + + F
Sbjct: 5 GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64
Query: 478 EDMLLAGVRPNQVTFVGALAACSNA-----GMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
MLL G+ P +V L+AC++A G + +++E ++ L+
Sbjct: 65 RGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTA------LV 118
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
++ +LG +A +M + V WS +A R+G+ LG + L + P
Sbjct: 119 SLYGKLGHCTDAASVFLRMSHR-DVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAP 175
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/684 (32%), Positives = 377/684 (55%), Gaps = 22/684 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+ + +++ L+ I+A ++ TG F++ LVN G + A+K+FD P
Sbjct: 78 YASLIDDSIHKTHLNQ---IYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP 134
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+V W +++ Y ++ AI ++ M A P + L ACS+L ++ +G++
Sbjct: 135 DPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRR 194
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H + ++ E D V N L +LY+ CG + A F R+ ++ ++SWT++I +NG+
Sbjct: 195 VHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQ 254
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
++ LR FS+M ++P+ L S+ + L G +H IK+G + S
Sbjct: 255 PIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLIS 314
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSI 375
+ LY KCG V A+ F+ + + +L+ WNAMI+G+ + NG EA+ +
Sbjct: 315 LTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVK------------NGYAEEAIEL 362
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F + S ++PD T +S + C+++ +LE + + F +DV+V T+L++ Y K
Sbjct: 363 FRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAK 422
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG ++ A VF + + ++ W++M+ G+ H +++ LF M AGV PN VTFVG
Sbjct: 423 CGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGL 482
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L AC N+G+V E F M ++Y I+P HY C++D+ R G ++ A++F+ M EP
Sbjct: 483 LTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEP 541
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+W ++ C+ H ++ LG YAAE+L L P + Y L +++ S+ W+ VA V+
Sbjct: 542 GVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRV 601
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF 675
L RE+ L++ +S I I K+ +F+ D HP+S EIF+ +++L + K G+
Sbjct: 602 LMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTES 661
Query: 676 ELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L D EE+ HSE+LAIA+GL++TP + + + K+ C +CH IK+I+ L +
Sbjct: 662 VLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLISKLVS 721
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H F +G C+C D+
Sbjct: 722 REIVVRDACRFHHFKDGACSCGDY 745
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 190/393 (48%), Gaps = 12/393 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S+ +L+ C +L +H I + G D FV LV +Y KCG + A VF L
Sbjct: 175 SFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRL 234
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VSWTS+ISGY QN QP A+ +F +M + P + L + L A + +E + GK
Sbjct: 235 VDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGK 294
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH V+K E + + SL SLY+ CG + A FN++ +++ W +I +NG
Sbjct: 295 SIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNG 354
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
A + + F M S+ I+P+ T+TS + C + SL + + + +++ V
Sbjct: 355 YAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNT 414
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ Y KCG VD A+ +FD + ++V W+AM+ G+ H G E++ +
Sbjct: 415 SLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYG-----------LHGQGRESIIL 463
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F + +G+ P+ TF +LT C +E+G + G +V++ +
Sbjct: 464 FHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGR 523
Query: 436 CGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
G ++RA + M +S W ++++ H
Sbjct: 524 AGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/713 (32%), Positives = 388/713 (54%), Gaps = 29/713 (4%)
Query: 59 FQEALSVLTEGP----KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ E +++ E ++ ++ + L C L +IHA I +G +
Sbjct: 101 YHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNS 160
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG ++ A+ VF++ ++ VSW SLI+GYV+ + + + + ML G
Sbjct: 161 LIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLN 220
Query: 175 NVTLGTALTACSS--LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+ LG+AL AC S SI GK +H VK + D VG +L Y+ G L A K
Sbjct: 221 SYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKI 280
Query: 233 FNRIREKNVMSWTTVIGACGE-----NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
F + + NV+ + +I + + A + + F +M S G++P+EFT +SI C
Sbjct: 281 FKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACS 340
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
T+ + G Q+H+ K S+ + N+++ LY G +++ K F +++V+W +
Sbjct: 341 TIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTS 400
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+I GH Q NG E L++F +L SG KPD +T S +L+ C+ L A++
Sbjct: 401 LIVGHVQ------------NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKS 448
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
GEQIHA +KTG + ++ + + MY KCG I+ A+ F E ++SW+ MI+ A
Sbjct: 449 GEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQ 508
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H + +A+ LFE M +G+ PN +TF+G L ACS+ G+V E L YFE+M+K++ I P +
Sbjct: 509 HGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVK 568
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
H C++D+ R G + EA FI FE + V+W ++ CR H + G AE++++L
Sbjct: 569 HSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIEL 628
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P+ SY +L +I+ AG ++NL ++ + + SWI + + V+SF D
Sbjct: 629 EPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAGDRS 688
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQ----ESFELTDEESASV-YHSEKLAIAFGLLNTP 701
HP S I+ L+E++E+ K Y + ++ E ++++ V YHSEKLA+ FG+++ P
Sbjct: 689 HPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSMVSYHSEKLAVTFGIISLP 748
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+P+ V+K+ C CH +K+ + L REII+RD R H+F +G C+C D+
Sbjct: 749 RSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFRDGSCSCGDY 801
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 255/509 (50%), Gaps = 18/509 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + +Y L+Q SL + ++ H H++KT F++ L+ +Y KCG + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+K+FD +P+ NVVSW SLISGY Q +++F + + T AL+ C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+RLG+ IHA + + NSL +Y CG ++ A F E + +SW ++I
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLI 193
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML--SLRVGAQVHSLGIKLG 306
G + LR KML G+ N + L S CG+ S+ G +H +KLG
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLG 253
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
++ V +++ Y K G +++A K+F M N+V +NAMIAG QM +A D+ +
Sbjct: 254 LDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMA-DEFA-- 310
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA+ +F ++ S GMKP +TFSSIL CS + A E G+QIHA K SD +G
Sbjct: 311 ---NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG 367
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
ALV +Y G IE + F ++SWTS+I G + L LF ++L +G +
Sbjct: 368 NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRK 427
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIE 542
P++ T L+AC+N V E + Y IK + ++ + I M+ + G I+
Sbjct: 428 PDEFTISIMLSACANLAAVKSG----EQIHA-YAIKTGIGNFTIIQNSQICMYAKCGDID 482
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
A + K P+ V WSV I+ +HG
Sbjct: 483 SA-NMTFKETKNPDIVSWSVMISSNAQHG 510
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 210/426 (49%), Gaps = 33/426 (7%)
Query: 173 PTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P + T L CS+ S+ GK H +++K + + N+L +Y CG + A K
Sbjct: 16 PLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKK 75
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+R+ ++NV+SW ++I + G + + F + ++ ++FT ++ SVCG L
Sbjct: 76 LFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLD 135
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
LR+G +H+L G + + NS++ +Y KCG +D A+ +F+ ++ V+WN++IAG
Sbjct: 136 LRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 195
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV--ALEQGEQ 409
+ ++ E L + K+ G+ + Y S L C ++E G+
Sbjct: 196 YVRI-----------GSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM 244
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN--- 466
+H +K G DVVVGTAL++ Y K G +E A+++F M ++ + +MI GF
Sbjct: 245 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMET 304
Query: 467 --HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKP 523
+++A+ LF +M G++P++ TF L ACS EA + + + +K
Sbjct: 305 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACS----TIEAFECGKQIHAQIFKYNL 360
Query: 524 VMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
D ++ L++++ G IE+ F K+D V W+ I G ++G E G
Sbjct: 361 QSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDV----VSWTSLIVGHVQNGQFEGGLT 416
Query: 579 AAEQLL 584
+LL
Sbjct: 417 LFHELL 422
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 12/195 (6%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G+ D T++ ++ +R +L G+ H +KT F + + L+ MY KCG + A
Sbjct: 14 GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
++F M R ++SW S+I+G+ H+ + LF++ ++ +R ++ TF AL+ C
Sbjct: 74 KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133
Query: 503 -----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
G + AL + PV+ LIDM+ + G I+ A + D E +
Sbjct: 134 LDLRLGRLIHALITVSGLG-----GPVL-LTNSLIDMYCKCGRIDWARLVFESAD-ELDS 186
Query: 558 VIWSVFIAGCRRHGN 572
V W+ IAG R G+
Sbjct: 187 VSWNSLIAGYVRIGS 201
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/730 (32%), Positives = 382/730 (52%), Gaps = 68/730 (9%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+ + C S+ + HA TG + FV LV +Y +CG++ +A+KVFD +P +
Sbjct: 133 VFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWD 192
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
VVSW S+I Y + +P++A+ +F M E G P ++TL L C+S+ + LGKQ H
Sbjct: 193 VVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFH 252
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ V + + VGN L +Y+ G ++ A F+ + K+V+SW ++ + G
Sbjct: 253 GFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFE 312
Query: 259 QGLRFFS-----------------------------------KMLSEGIQPNEFTLTSIS 283
+R F +MLS GI+PNE TL S+
Sbjct: 313 DAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLR---------VRNSIMYLYLKCGLVDEAQKLF 334
S C ++ +L G ++H IK Y +LR V N ++ +Y KC VD A+ +F
Sbjct: 373 SGCASVGALMHGKEIHCYAIK--YPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMF 430
Query: 335 DGMS--HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL--NSSGMKPDLYT 390
D +S ++VTW MI G++Q H +AL + S++ +P+ +T
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQ-----------HGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEM 449
S L C+ L AL G+QIHA L+ + + V L++MY KCG I A VF M
Sbjct: 480 ISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNM 539
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ ++WTS++TG+ H +AL +FE+M G + + VT + L ACS++GM+ + +
Sbjct: 540 MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
YF M+ ++ + P +HY CL+D+ R G + A I++M EP V+W ++ CR
Sbjct: 600 EYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRI 659
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
HG +ELG YAA+++ +L + SY +L +++ +AGRW+DV +++L R + + + S
Sbjct: 660 HGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCS 719
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL---TDEESASVY 686
W+ +F D HP + EI++VL + +++ K GY + F L DEE +
Sbjct: 720 WVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQRIKDIGYVPETGFALHDVDDEEKDDLL 779
Query: 687 --HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSEKLA+A+G+L TP + I + K+ +C DCH ++ + EII+RDS R H F
Sbjct: 780 FEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHEIILRDSSRFHHF 839
Query: 745 VNGHCTCRDF 754
NG C+C+ +
Sbjct: 840 KNGLCSCKGY 849
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 151/539 (28%), Positives = 261/539 (48%), Gaps = 44/539 (8%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN--VVSWTS 145
K++S ++IH ++ G + + L++ Y G + A + P + V W S
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
LI Y N + + F M P N T AC + S+R G HA
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ VGN+L ++YS CGSL+ A K F+ + +V+SW ++I + + G+ L FS
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 266 KMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
KM +E G +P++ TL ++ C ++ + +G Q H + N+ V N ++ +Y K
Sbjct: 218 KMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKF 277
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM-------------------MDL-----AK 360
G++DEA +F M ++V+WNAM+AG++Q+ MD+ A
Sbjct: 278 GMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAI 337
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL----- 415
+ G EAL + ++ SSG+KP+ T S+L+ C+ + AL G++IH +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD 397
Query: 416 --KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST--RTLISWTSMITGFANHSLSH 471
K G + +V L++MY KC +++ A +F +S R +++WT MI G++ H ++
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 472 QALQLFEDMLLAG--VRPNQVTFVGALAACSN--AGMVYEALGYFEMMQKEYKIKPVMDH 527
+AL+L +M RPN T AL AC++ A + + + + + ++ + + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSN 517
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
CLIDM+ + G I +A M E NEV W+ + G HG E E++ ++
Sbjct: 518 --CLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI 573
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 219/476 (46%), Gaps = 71/476 (14%)
Query: 36 SYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI 95
SY + G + L S+ GF+ + V++L C + + S +
Sbjct: 202 SYAKLGKPKMALEMFSKMTNEFGFRP-----------DDITLVNVLPPCASVGTRSLGKQ 250
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
H V + Q+ FV LV++Y K G M+EA VF N+P +VVSW ++++GY Q +
Sbjct: 251 FHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGR 310
Query: 156 PELAIHVF-----------------------------------LDMLEAGNYPTNVTLGT 180
E A+ +F ML +G P VTL +
Sbjct: 311 FEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTE-------DDTSVGNSLCSLYSTCGSLNSAIKAF 233
L+ C+S+ ++ GK+IH Y +KY + D+ V N L +Y+ C ++ A F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMF 430
Query: 234 NRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTM 289
+ + +E++V++WT +IG ++G+A + L S+M E Q PN FT++ C ++
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
Query: 290 LSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+L +G Q+H+ ++ A L V N ++ +Y KCG + +A+ +FD M N VTW ++
Sbjct: 491 AALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSL 550
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG- 407
+ G+ H G EAL IF ++ G K D T +L CS ++QG
Sbjct: 551 MTGYGM-----------HGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGM 599
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMIT 462
E + + G LV++ + GR+ A R+ EM + W ++++
Sbjct: 600 EYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLS 655
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 75/431 (17%)
Query: 216 LCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
L S Y + G L+ A+ R + V W ++I + G NG A + L F M S
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ +T + CG + S+R G H+L G+ SN+ V N+++ +Y +CG + +A+K+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFS 392
FD M ++V+WN++I +A+ L K + AL +FSK+ N G +PD T
Sbjct: 185 FDEMPVWDVVSWNSIIESYAK---LGKPKM--------ALEMFSKMTNEFGFRPDDITLV 233
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++L C+ + G+Q H + + + ++ VG LV+MY K G ++ A+ VF M +
Sbjct: 234 NVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK 293
Query: 453 TLISWTSM-----------------------------------ITGFANHSLSHQALQLF 477
++SW +M I+G+A L ++AL +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIKPVM--------D 526
ML +G++PN+VT + L+ C++ G + M KE Y IK M D
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGAL--------MHGKEIHCYAIKYPMDLRKNGHGD 405
Query: 527 HYMC---LIDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQ 582
M LIDM+ + ++ A + + +V+ W+V I G +HG+ A E
Sbjct: 406 ENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN---KALEL 462
Query: 583 LLKLKPKDCES 593
L ++ +DC++
Sbjct: 463 LSEMFEEDCQT 473
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 133/284 (46%), Gaps = 20/284 (7%)
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
L + + ++ Y+ G + A L S + WN++I + +NG
Sbjct: 59 LNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYG------------NNG 106
Query: 369 -GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+ LS F ++S PD YTF + C + ++ G+ HAL+ TGF+S+V VG
Sbjct: 107 RANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGN 166
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVR 486
ALV MY +CG + A +VF EM ++SW S+I +A AL++F M G R
Sbjct: 167 ALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFR 226
Query: 487 PNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
P+ +T V L C++ G +LG F ++ M CL+DM+ + G ++EA
Sbjct: 227 PDDITLVNVLPPCASVGT--RSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEAN 284
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
M + + V W+ +AG + G E EQ+ + K K
Sbjct: 285 TVFSNMPVK-DVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIK 327
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/705 (33%), Positives = 388/705 (55%), Gaps = 24/705 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + E G T + V+ LQ C + IHA I+K+ D +V LV
Sbjct: 95 EALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALV 154
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++ + G M A ++FD L + ++W S+I+G+ QN A+ F + +A P V
Sbjct: 155 AMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEV 214
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+L + L A L + GK+IHAY +K + + +GN+L +YS C + A F+++
Sbjct: 215 SLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM 274
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
K+++SWTTVI A +N + L+ K+ ++G+ + + S C + L
Sbjct: 275 INKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAK 334
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+VH +K G S+L ++N I+ +Y CG ++ A ++F+ + ++V+W +MI+ +
Sbjct: 335 EVHGYTLKRGL-SDLMMQNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYV--- 390
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG EAL +F + + ++PD T SIL+ + L AL +G++IH
Sbjct: 391 ---------HNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIF 441
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF+ + +LV+MY CG +E A +VF+ +++L+ WT+MI + H A++
Sbjct: 442 RKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVE 501
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF M + P+ +TF+ L ACS++G++ E E M+ +Y+++P +HY CL+D+
Sbjct: 502 LFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLL 561
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R +EEA+ F+K M EP +W F+ CR H N +LG AA++LL L P SY
Sbjct: 562 GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYV 621
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ ++F ++GRW+DV V+ + L + SWI + +KV++F D HP+S +I++
Sbjct: 622 LISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVHTFLVRDKSHPESYKIYQ 681
Query: 656 VLDELVEK-AKCFGYKQQESFEL----TDEESASVY-HSEKLAIAFGLLNTPIVSPILVV 709
L ++ EK K GY Q L +E+ +Y HSE+LAIA+GL++T +PI +
Sbjct: 682 KLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLAIAYGLMSTSEGTPIRIT 741
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH F K+++ RE+IVRD+ R H F +G C+C DF
Sbjct: 742 KNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCGDF 786
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/426 (32%), Positives = 232/426 (54%), Gaps = 13/426 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ +L+ C + + IH I+K G FV LV++Y KC ++ A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 129 QKVFDNL-PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+K+FD + R +VVSW S+IS Y N Q A+ +F +M +AG TL AL AC
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+LG +IHA ++K D V N+L +++ G ++ A + F+ + EK+ ++W ++
Sbjct: 125 SSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSM 184
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L+FF + ++P+E +L SI + G + L G ++H+ +K
Sbjct: 185 IAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWL 244
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
SNLR+ N+++ +Y KC V A +FD M + +L++W +IA +AQ +N
Sbjct: 245 DSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQ-----------NN 293
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
TEAL + K+ + GM D S L CS L L +++H TLK G LSD+++
Sbjct: 294 CHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG-LSDLMMQN 352
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++++Y CG I A+R+F + + ++SWTSMI+ + ++ L+++AL +F M V P
Sbjct: 353 MIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEP 412
Query: 488 NQVTFV 493
+ +T V
Sbjct: 413 DSITLV 418
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 170/326 (52%), Gaps = 14/326 (4%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L AC +E I G +IH ++K + V NSL S+Y+ C + A K F+R+
Sbjct: 12 TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71
Query: 237 REKN-VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
E+N V+SW ++I A NG+ ++ L F +M G+ N +TL + C ++G
Sbjct: 72 NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLG 131
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H+ +K ++ V N+++ ++++ G + A ++FD + + +TWN+MIAG Q
Sbjct: 132 MEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQ- 190
Query: 356 MDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
NG EAL F L + +KPD + SIL RL L G++IHA
Sbjct: 191 -----------NGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYA 239
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K S++ +G L++MY KC + A VF +M + LISWT++I +A ++ +AL
Sbjct: 240 MKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACS 500
+L + G+ + + L ACS
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACS 325
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 28/304 (9%)
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G+ + FT + CG + + GA++H L IK GY S + V NS++ +Y KC + A
Sbjct: 5 GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64
Query: 331 QKLFDGMSHVN-LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
+KLFD M+ N +V+WN++I+ + S + EAL +F ++ +G+ + Y
Sbjct: 65 RKLFDRMNERNDVVSWNSIISAY-----------SLNGQCMEALGLFREMQKAGVGANTY 113
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T + L C + G +IHA LK+ + DV V ALV M+ + G++ A+R+F E+
Sbjct: 114 TLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDEL 173
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ I+W SMI GF + L ++ALQ F + A ++P++V+ + LAA L
Sbjct: 174 DEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGR-------L 226
Query: 510 GYFEMMQKE---YKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
GY + KE Y +K +D + LIDM+ + C+ A KM + + W+
Sbjct: 227 GYL-LNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKM-INKDLISWTT 284
Query: 563 FIAG 566
IA
Sbjct: 285 VIAA 288
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/687 (32%), Positives = 368/687 (53%), Gaps = 19/687 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF--VMTFLVNVYGKCGNMEEAQKVFD 133
++ +LL C + + +HA VK G + F V L+ Y + ++ A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+P + V++ +LI+GY ++ +IH+FL M ++G+ P++ T L A L L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+Q+HA V D SVGN + YS + F+ + E + +S+ VI + +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ L FF +M G F ++ S+ + SL++G Q+H + S L V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC + +EA+ +F + V+W A+I+G+ Q H G L
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK--------GLHGAG---L 437
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F+K+ S ++ D TF+++L + +L G+Q+HA +++G L +V G+ LV+MY
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A +VF EM R +SW ++I+ A++ A+ F M+ +G++P+ V+ +
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+ G V + YF+ M Y I P HY C++D+ R G EA + +M F
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL-KPKDCESYAMLLDIFVSAGRWEDVAV 612
EP+E++WS + CR H N L AAE+L + K +D +Y + +I+ +AG WE V
Sbjct: 618 EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
VK RE + + +SW+ + K++ F ND HP EI + ++EL + + GYK
Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPD 737
Query: 673 ESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
S + D +E + YHSE+LA+AF L++TP PI+V+K+ CRDCH IK+I+
Sbjct: 738 TSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISK 797
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI VRD+ R H F G C+C D+
Sbjct: 798 IVKREITVRDTSRFHHFSEGVCSCGDY 824
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/576 (26%), Positives = 268/576 (46%), Gaps = 52/576 (9%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYV 78
RQPS AT D +R +++I+ +++ RS E L L G Q S+
Sbjct: 22 RQPSP--ATFLDT------RRVDARIIKTGFDTDTCRSNFIVEDL--LRRG---QVSAAR 68
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+ E ++ ++S +I H+ K G++ A+ +FD +P
Sbjct: 69 KVYDEMPHKNTVSTNTMISGHV--------------------KTGDVSSARDLFDAMPDR 108
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSSLESIRLGKQ 196
VV+WT L+ Y +NS + A +F M + + P +VT T L C+ Q
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 197 IHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+HA+ VK + T +V N L Y L+ A F I EK+ +++ T+I ++
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + + F KM G QP++FT + + + +G Q+H+L + G++ + V
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVG 288
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N I+ Y K V E + LFD M ++ V++N +I+ ++Q D A +L
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ-----ADQYEA------SLH 337
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F ++ G + F+++L+I + L +L+ G Q+H L S + VG +LV+MY
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KC E A +F + RT +SWT++I+G+ L L+LF M + +R +Q TF
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L A ++ + + + ++ V L+DM+ + G I++A ++M +
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP-D 515
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
N V W+ I+ +G+ E A ++++ L+P
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 202/418 (48%), Gaps = 16/418 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + G + ++ +L+ V + + +HA V TG +D V +++ Y K
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
+ E + +FD +P ++ VS+ +IS Y Q Q E ++H F +M G N T L
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+ ++L S+++G+Q+H + + VGNSL +Y+ C A F + ++ +
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT +I + G GL+ F+KM ++ ++ T ++ + SL +G Q+H+
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ G N+ + ++ +Y KCG + +A ++F+ M N V+WNA+I+ HA D
Sbjct: 479 IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD----- 533
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLS 421
G A+ F+K+ SG++PD + +LT CS +EQG E A++ G
Sbjct: 534 ------GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITG---FANHSLSHQALQ 475
++++ + GR A ++ EM I W+S++ N SL+ +A +
Sbjct: 588 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAE 645
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/694 (32%), Positives = 371/694 (53%), Gaps = 47/694 (6%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++ S+L+ C L + IHAH +KT + FV+T LV++Y KC + E
Sbjct: 132 EGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILE 191
Query: 128 AQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A+ +F+ P + N V WT++++GY QN AI F DM G T + LTAC
Sbjct: 192 AEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACG 251
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
S+ + G Q+H +V+ + VG++L +YS CG L++A + + + +SW +
Sbjct: 252 SISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNS 311
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I C G + L F M ++ +EFT S+ + ++ +R VHSL +K G
Sbjct: 312 MIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTG 371
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ + V N+++ +Y K G D A +F+ M+ ++++W +++ G H
Sbjct: 372 FEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTG------------CVH 419
Query: 367 NGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG EAL +F ++ G+ PD +++L+ C+ L LE G+Q+HA LK+G S + V
Sbjct: 420 NGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSV 479
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+LV+MY KCG IE A++VF M + +I+WT++I G+A +
Sbjct: 480 DNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRD------------- 526
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+AG+V YF+ M++ Y IKP +HY C+ID+ R G + EA
Sbjct: 527 ---------------HAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAK 571
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ + +M +P+ +W +A CR HGN+ELG AA L +L+PK+ Y +L +++ +AG
Sbjct: 572 ELLNQMAVQPDATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAG 631
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+WE+ A + L + +S+ SWI + KV+ F D HP++AEI+ +DE++ K
Sbjct: 632 KWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIK 691
Query: 666 CFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY +F L D +E YHSEKLA+AFGLL P +PI + K+ +C DCH
Sbjct: 692 EAGYVPDMNFALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHT 751
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K ++ + R +I+RDS H F G C+C D+
Sbjct: 752 AMKYVSGVFHRHVILRDSNCFHHFREGACSCSDY 785
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 266/504 (52%), Gaps = 27/504 (5%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ Y G + EA+K+F P + ++W+SLISGY + A+ +F +M G P
Sbjct: 78 MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T G+ L CS + GKQIHA+ +K Q + + V L +Y+ C + A F
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197
Query: 235 RIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+K N + WT ++ +NG+ + + F M EGI+ N+FT SI + CG++ +
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
GAQVH ++ G+ +N+ V ++++ +Y KCG + A+++ + M + V+WN+MI G
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCV 317
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ G EALS+F ++ MK D +T+ S+L S ++ + +H+L
Sbjct: 318 R-----------QGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSL 366
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+KTGF + +V ALV+MY K G + A VF +M+ + +ISWTS++TG ++ +A
Sbjct: 367 IVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 426
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMV-YEALGYFEMMQKEYKIKPVMDHYMCLI 532
L+LF +M + G+ P+Q+ L+AC+ ++ + + ++ +D+ L+
Sbjct: 427 LRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLV 484
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN-------MELG---FYAAEQ 582
M+ + GCIE+A M+ + + + W+ I G ++G +E G F + E+
Sbjct: 485 SMYAKCGCIEDANKVFDSMEIQ-DVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEE 543
Query: 583 LLKLKPKDCESYAMLLDIFVSAGR 606
+ +KP E YA ++D+ +G+
Sbjct: 544 VYGIKPGP-EHYACMIDLLGRSGK 566
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 207/439 (47%), Gaps = 49/439 (11%)
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C LE L I +V T +S N + S S CG ++ A K F+ + +++ SW
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75
Query: 245 TTVIGACGENGE-------------------------------AVQGLRFFSKMLSEGIQ 273
T+IGA +G V+ L F +M EG +
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN+FT S+ VC + L G Q+H+ IK + SN V ++ +Y KC + EA+ L
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 334 FD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F+ N V W AM+ G++Q D G +A+ F + G++ + +TF
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGD-----------GHKAIECFRDMRGEGIECNQFTFP 244
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
SILT C + A G Q+H +++GF ++V VG+ALV+MY KCG + A R+ M
Sbjct: 245 SILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD 304
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+SW SMI G L +AL LF M L ++ ++ T+ L S + A+
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVH 364
Query: 513 EMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
++ K ++ ++++ L+DM+ + G + AFD +KM + + + W+ + GC +G
Sbjct: 365 SLIVKTGFEAYKLVNN--ALVDMYAKRGYFDYAFDVFEKMT-DKDVISWTSLVTGCVHNG 421
Query: 572 NME--LGFYAAEQLLKLKP 588
+ E L + +++ + P
Sbjct: 422 SYEEALRLFCEMRIMGIHP 440
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 42/220 (19%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+YTFS +C +L E I G + +++ KCGR++ A ++F
Sbjct: 8 IYTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFD 65
Query: 448 EMSTRTLISWTSMITGFAN-------------------------------HSLSHQALQL 476
M R SW +MI +AN + +AL+L
Sbjct: 66 VMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALEL 125
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH----YMCLI 532
F +M G RPNQ T+ L CS +Y L + + + IK D L+
Sbjct: 126 FWEMQYEGERPNQFTWGSVLRVCS----MYVLLEKGKQIHA-HAIKTQFDSNAFVVTGLV 180
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
DM+ + CI EA + + N V+W+ + G ++G+
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGD 220
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/776 (31%), Positives = 392/776 (50%), Gaps = 99/776 (12%)
Query: 77 YVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
Y + L+ C+ R SL A +H +I+ G ++ L++VY K ++ A+++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74
Query: 135 LPRINVVSWTSLISGYV---------------------------------QNSQPELAIH 161
+ + ++ T+++SGY N+ AI+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 162 VFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F M G P + T + L + ++ + Q HA +K TSV N+L S+Y
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVY 194
Query: 221 STCGS----LNSAIKAFNRIREKNVMSWTTVIGACGENG------EAVQG---------- 260
S C S L+SA K F+ I EK+ SWTT++ +NG E ++G
Sbjct: 195 SRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAY 254
Query: 261 ----------------LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
L +M+S GI+ +EFT S+ C L++G QVH+ ++
Sbjct: 255 NAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR 314
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
S NS++ LY KCG +EA+ +F+ M +LV+WNA+++G+ + + L
Sbjct: 315 REDFS-FHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 365 -------------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
A NG G E L +FS + G +P Y FS + C+ L A
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
G+Q HA +K GF S + G AL+ MY KCG +E A +VF M +SW ++I
Sbjct: 434 CNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAAL 493
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
H +A+ ++E+ML G+RP+++TF+ L ACS+AG+V + YF M+ Y+I P
Sbjct: 494 GQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPG 553
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
DHY LID+ R G EA I+ + F+P IW ++GCR HGNMELG AA++L
Sbjct: 554 ADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
L P+ +Y +L +++ + G+WE+VA V+ L R+ + + SWI ++ +V++F +D
Sbjct: 614 GLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS------VYHSEKLAIAFGLL 698
HP++ ++K L +L ++ + GY SF L D ES HSEK+A+AFGL+
Sbjct: 674 TSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM 733
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P + I + K+ C DCHNF + ++ + R+II+RD KR H F NG C+C +F
Sbjct: 734 KLPPGTTIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNF 789
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 191/446 (42%), Gaps = 90/446 (20%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+QEAL ++ + G ++ +Y S+++ C N + L + +HA++++ F
Sbjct: 267 YQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFS-FHFDNS 325
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV----------------------- 151
LV +Y KCG EA+ +F+ +P ++VSW +L+SGYV
Sbjct: 326 LVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 152 --------QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
+N E + +F M G P + A+ +C+ L + G+Q HA +VK
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVK 445
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ S GN+L ++Y+ CG + A + F + + +SW +I A G++G V+ +
Sbjct: 446 IGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDV 505
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+ +ML +GI+P+ T ++ + C
Sbjct: 506 YEEMLKKGIRPDRITFLTVLTACS-----------------------------------H 530
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
GLVD+ +K F+ M V + A +A+++DL L +EA SI L
Sbjct: 531 AGLVDQGRKYFNSMETVYRIPPGA--DHYARLIDL----LCRSGKFSEAESIIESLP--- 581
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV--NMYKKCGRIER 441
KP + ++L+ C +E G I A G + + GT ++ NMY G+ E
Sbjct: 582 FKPTAEIWEALLSGCRVHGNMELG--IIAADKLFGLIPE-HDGTYMLLSNMYAATGQWEE 638
Query: 442 ASRVFVEMSTRTL-----ISWTSMIT 462
+RV M R + SW M T
Sbjct: 639 VARVRKLMRDRGVKKEVACSWIEMET 664
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 9/160 (5%)
Query: 42 SKLIQLNGNSEPVRSLGF-QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEII 96
S +I ++G +E GF +E L + + EG + ++ ++ C + N +
Sbjct: 384 SWMIMISGLAEN----GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQF 439
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA +VK G L+ +Y KCG +EEAQ+VF +P ++ VSW +LI+ Q+
Sbjct: 440 HAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
A+ V+ +ML+ G P +T T LTACS + G++
Sbjct: 500 VEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRK 539
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/695 (33%), Positives = 380/695 (54%), Gaps = 27/695 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C L IHAH G H D FV T L+++Y +C A+ VF +
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
P +VV+W ++++GY + AI LDM + G P TL + L + ++ G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
Query: 195 KQIHAYVVKY---QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
IHAY ++ Q E+ +G +L +Y+ C L A + F+ + +N ++W+ +IG
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS---VCGTMLSLRVGAQVHSLGIKLGYA 308
+ F ML EG+ + TS++S VC ++ L +G Q+H+L K G
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++L NS++ +Y K GL++EA FD ++ + +++ A+++G Q NG
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ------------NG 387
Query: 369 -GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA +F K+ + M+PD+ T S++ CS L AL+ G+ H + G + +
Sbjct: 388 KAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN 447
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+L++MY KCG+I+ + +VF +M R ++SW +MI G+ H L +A LF M G P
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAP 507
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTF+ +AACS++G+V E +F+ M +Y I P M+HY+C++D+ R G ++EA+ F
Sbjct: 508 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQF 567
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I+ M + + +W + CR H N++LG + + KL P+ ++ +L +IF +AGR+
Sbjct: 568 IQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRF 627
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
++ A V+ + + + ++ +SWI I +++F D HP S +I+ LD ++ K
Sbjct: 628 DEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKL 687
Query: 668 GYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY+ SF L D +E A +YHSEKLAIAFG+L+ I V K+ +C DCH I
Sbjct: 688 GYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAI 747
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDFGVS 757
K +T + R IIVRD+ R H F NG C+C +F +S
Sbjct: 748 KYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFWLS 782
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 217/473 (45%), Gaps = 27/473 (5%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + A++VFD +P + ++ +LI Y AI ++ ML P T L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
ACS+L +R G+ IHA+ D V +L LY C A F ++ ++V+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W ++ +G + M G++PN TL S+ + +L G +H+
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 302 GIKLGYASN---LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++ N + + +++ +Y KC + A ++F GM N VTW+A+I G +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGM-KPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
TEA ++F + G+ + +S L +C+ L L G Q+HAL K+
Sbjct: 288 -----------TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS 336
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G +D+ +L++MY K G I A+ F E++ + IS+ ++++G + + +A +F
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV-MDHYMC--LIDM 534
+ M + P+ T V + ACS+ AL + + I+ + ++ +C LIDM
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLA----ALQHGKCSHGSVIIRGLALETSICNSLIDM 452
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
+ + G I+ + KM + V W+ IAG HG LG A L +K
Sbjct: 453 YAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG---LGKEATTLFLGMK 501
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 2/282 (0%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S S L+ C + L +HA I K+G H D L+++Y K G + EA
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF 364
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + +S+ +L+SG VQN + E A VF M P T+ + + ACS L ++
Sbjct: 365 FDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAAL 424
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ GK H V+ +TS+ NSL +Y+ CG ++ + + F+++ ++V+SW T+I
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASN 310
G +G + F M ++G P++ T + + C + G ++ K G
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPR 544
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ ++ L + GL+DEA + M ++ W A++
Sbjct: 545 MEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/715 (32%), Positives = 375/715 (52%), Gaps = 27/715 (3%)
Query: 50 NSEPVRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
N++P +EA ++ TE G K ++ +LL + +L IH+HI++ G
Sbjct: 121 NNQP------KEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGF 174
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
V LV+ Y K ++ A ++F +P + VS+ +I+GY + E A+ +F+
Sbjct: 175 SASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQ 234
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M P+ T L E + G+QIH +K D V N+L YS
Sbjct: 235 MRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDY 294
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
++ A F+ + E + +S+ +I NG+ + F ++ F ++ SV
Sbjct: 295 IDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSV 354
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
L+L +G Q H+ + S ++V N+++ +Y KC ++A ++F +++ N V W
Sbjct: 355 AAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPW 414
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
A+I+ + Q EAL +F ++N + D TF+S L + L ++
Sbjct: 415 TAIISIYVQ-----------KGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVS 463
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+H+ ++ G LS V G+ LV+MY CG ++ A VF EM R ++ W ++I+ ++
Sbjct: 464 LGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYS 523
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ + F DM+ +G+ P+ V+F+ L ACS+ G+V +AL YF M + YK+ P
Sbjct: 524 QNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRR 583
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY +ID+ R G EA + I +M FEP+EV+WS + CR H N +L AA+QL K
Sbjct: 584 KHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFK 643
Query: 586 LKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+ +D +Y + +I+ AG+WE+ A VK RE + + +SW+ I +V+ F ND
Sbjct: 644 MDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTAND 703
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEE---SASVYHSEKLAIAFGLLN 699
HPQ+ +I + ++ LVE GYK S L DEE + YHSE+LAIAF L+N
Sbjct: 704 RTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKIESLKYHSERLAIAFALIN 763
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP SPI+++K+ C DCH IK+I+ + REI VRDS R H F +G C+C D+
Sbjct: 764 TPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRFHHFRDGSCSCGDY 818
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 286/591 (48%), Gaps = 63/591 (10%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+V+ Y K N+ A+++F+++ N VSWT +I GY QN+QP+ A +++ +M +G P
Sbjct: 83 MVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPD 142
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
++T T L+ +++ QIH++++++ V NSL Y L+ A + F+
Sbjct: 143 HITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFS 202
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ K+ +S+ +I + G + L+ F +M + QP+ FT ++ + +
Sbjct: 203 EMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIF 262
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H L IK Y ++ V N+++ Y K +D A+ LFD M ++ V++N +I G+A
Sbjct: 263 GQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAW 322
Query: 355 MMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG E + +F +L + + F+++L++ + + L G Q HA
Sbjct: 323 ------------NGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQ 370
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ T +S+V VG ALV+MY KC + E A+R+F ++ R + WT++I+ + +A
Sbjct: 371 AVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEA 430
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY--MCL 531
L++F++M V +Q TF L A +N V +LG ++ ++ + + L
Sbjct: 431 LKMFKEMNRENVHGDQATFASTLKASANLASV--SLGK-QLHSSVIRLGLLSSVFSGSVL 487
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN-----------MELGFY-- 578
+DM+ G +++A + K+M + N V W+ I+ ++G+ +E G Y
Sbjct: 488 VDMYANCGSMKDAIEVFKEMP-DRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPD 546
Query: 579 -------------------------AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ Q+ KL P+ + YA ++D+ +GR+ +
Sbjct: 547 SVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRR-KHYATMIDVLCRSGRFNE---A 602
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
+NL E E D+ W + + K D + ++FK +D L + A
Sbjct: 603 ENLISEMPF-EPDEVMWSSVLNSCRIHKNQDLAKKAADQLFK-MDALRDAA 651
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 141/272 (51%), Gaps = 11/272 (4%)
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+TS N + S Y +L A + F + +N +SWT +IG +N + + +++M
Sbjct: 76 NTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMC 135
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G++P+ T ++ S +L+ Q+HS I+ G++++L V NS++ Y K +D
Sbjct: 136 RSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLD 195
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
A +LF M + V++N MI G+ + + EAL +F ++ + +P
Sbjct: 196 IASQLFSEMPTKDSVSFNVMITGYTK-----------YGFREEALKLFMQMRNMDFQPSG 244
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+TF+++L + + G+QIH L +KT ++ D+ V AL++ Y K I+ A +F E
Sbjct: 245 FTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDE 304
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
M +S+ +ITG+A + ++ LF+ +
Sbjct: 305 MPELDGVSYNIIITGYAWNGQYEKSFDLFKRL 336
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 234/738 (31%), Positives = 391/738 (52%), Gaps = 36/738 (4%)
Query: 39 RSGSKLIQLNGNSEPVRSL-GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIH 97
R+ + LI+ +S P + G +L ++ L+ C IH
Sbjct: 89 RTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIH 148
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE 157
H + G D FV T L+++Y KC + +A +F +P ++V+W ++++GY +
Sbjct: 149 RHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYH 208
Query: 158 LAIHVFLDMLEAGNY--PTNVTLGTALTACSSLESIRLGKQIHAYVV----------KYQ 205
A+ L M + P TL L + ++ G +HAY + K +
Sbjct: 209 HAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNRNSKSK 268
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D +G +L +Y+ CGSL A + F+ + +N ++W+ +IG Q F
Sbjct: 269 LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFK 328
Query: 266 KMLSEGIQPNEFTLTSISSV---CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
ML++G+ + TSI+S C ++ LR+G Q+H+L K G ++L NS++ +Y
Sbjct: 329 AMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA 386
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS 381
K GL+D+A LFD M+ + V+++A+++G+ Q NG EA +F K+ +
Sbjct: 387 KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ------------NGRAEEAFLVFKKMQA 434
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
++PD T S++ CS L AL+ G H + G S+ + AL++MY KCGRI+
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+ +VF M +R ++SW +MI G+ H L +A LF +M G P+ VTF+ L+ACS+
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+G+V E +F +M+ Y + P M+HY+C++D+ R G ++EA++FI+ M + +W
Sbjct: 555 SGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 562 VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+ CR + N++LG + + +L P+ ++ +L +I+ +AGR+++ A V+ + + +
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 674
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-- 679
++ SWI I +++F D HPQS EI++ LD ++ K GY+ SF L D
Sbjct: 675 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLE 734
Query: 680 ---EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+E A + HSEKLAIA+G+L+ I V K+ +C DCH IK I+ L R IIVR
Sbjct: 735 EEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLLKRRAIIVR 794
Query: 737 DSKRLHKFVNGHCTCRDF 754
D+ R H F NG C+C DF
Sbjct: 795 DANRFHHFKNGQCSCGDF 812
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 236/507 (46%), Gaps = 59/507 (11%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA--IHVFLDMLEAGNYPTNVTLGT 180
G++ A +FD +P +V ++ LI Y +S A +H++ ML P N T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
AL ACS+L G+ IH + + + D V +L +Y C L A F + ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 241 VMSWTTVIGACGENG---EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++W ++ +G AV L +M ++PN TL ++ + +L G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 298 VHSLGIKLGYASNLRVRNS-------------IMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
VH+ I+ SN RNS ++ +Y KCG + A+++FD M N VT
Sbjct: 250 VHAYRIRACLHSN---RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG---MKPDLYTFSSILTICSRL 401
W+A+I G + T+A +F + + G + P + +S L C+ L
Sbjct: 307 WSALIGGFVLCSRM-----------TQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 353
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
L GEQ+HAL K+G +D+ G +L++MY K G I++A +F EM+ + +S+++++
Sbjct: 354 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 413
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+G+ + + +A +F+ M V P+ T V + ACS+ AL + I
Sbjct: 414 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH----LAALQHGRCSHGSVII 469
Query: 522 KPVM-DHYMC--LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ + + +C LIDM+ + G I+ + F+ + D V W+ IAG HG L
Sbjct: 470 RGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI----VSWNTMIAGYGIHG---L 522
Query: 576 GFYAAEQLLKLK----PKDCESYAMLL 598
G A L++ P D ++ LL
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLL 549
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
++ G + A LFD + ++ T+N +I ++ S+ + L ++ ++
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSS---------SSPTAAADGLHLYRRML 117
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+ P+ YTF L CS L G IH + G +D+ V TAL++MY KC +
Sbjct: 118 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 177
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ--LFEDMLLAGVRPNQVTFVGALAA 498
A+ +F M R L++W +M+ G+A+H + H A+ L M + +RPN T V L
Sbjct: 178 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 237
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHY--------------MCLIDMFVRLGCIEEA 544
+ G + + Y+I+ + L+DM+ + G + A
Sbjct: 238 LAQQGALAQGTSV-----HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYA 292
Query: 545 FDFIKKMDFEPNEVIWSVFIAG---CRRHGNMELGFYA--AEQLLKLKPKDCES 593
M NEV WS I G C R L F A A+ L L P S
Sbjct: 293 RRVFDAMPAR-NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 345
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/642 (35%), Positives = 361/642 (56%), Gaps = 31/642 (4%)
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
K FD R +V SW SLI+ + ++ F M + P T A+ +CS+L
Sbjct: 39 NKYFD---RTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSAL 95
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ GKQ H + + E D V ++L +YS CG L++A F+ I +N+++WT++I
Sbjct: 96 FDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLI 155
Query: 249 GACGENGEAVQGLRFFSKMLSE---------GIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+N +A + L F + L E G + + S+ S C + + V VH
Sbjct: 156 TGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVH 215
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK+G + V N+++ Y KCG V ++K+FD M+ ++V+WN+MIA +AQ
Sbjct: 216 GVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQ----- 270
Query: 360 KDDLSAHNG-GTEALSIF-SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
NG T+A +F L + G K + T S++L C+ AL G +H +K
Sbjct: 271 -------NGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKM 323
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G++++V++ T++++MY KCG+ E A F M + + SWT+MI G+ H + +AL +F
Sbjct: 324 GYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVF 383
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M+ AGV+PN +TF+ LAACS+AG + E +F M EY ++P ++HY C++D+ R
Sbjct: 384 YQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGR 443
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G I+EA++ IK M + V+W +A CR H ++EL +A +L KL P +C Y +L
Sbjct: 444 AGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLL 503
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+I+ AGRW+DV ++ L ++ L + +S + +K +V+ F D HPQ +I+K L
Sbjct: 504 ANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYL 563
Query: 658 DELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKST 712
+EL K + GY + L DEE + HSEKLA+AFG++N+ S I V+K+
Sbjct: 564 EELSVKLQEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNL 623
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH IK+I+ + +REIIVRD+KR H F +G C+C D+
Sbjct: 624 RVCGDCHTVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDY 665
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 226/450 (50%), Gaps = 28/450 (6%)
Query: 30 DKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKS 89
D+ S+ ++L + + E +R+ + L + K S++ ++ C
Sbjct: 43 DRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDI-----KPNRSTFPCAIKSCSALFD 97
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L++ + H + G D FV + L+++Y KCG + A+ +FD +PR N+V+WTSLI+G
Sbjct: 98 LNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITG 157
Query: 150 YVQNSQPELAIHVFLDML---------EAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
YVQN A+ VF + L E G +V + + L+ACS + + + + +H
Sbjct: 158 YVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGV 217
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
+K + V N+L Y+ CG ++ + K F+ + EK+V+SW ++I +NG +
Sbjct: 218 AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDA 277
Query: 261 LRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
F ML + G + NE TL+++ C +LRVG +H IK+GY +N+ + SI+
Sbjct: 278 FEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIID 337
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG + A+ FDGM N+ +W AMIAG+ H EAL +F ++
Sbjct: 338 MYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGM-----------HGFAREALDVFYQM 386
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+G+KP+ TF S+L CS LE+G + +A++ + V +V++ + G
Sbjct: 387 IWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGY 446
Query: 439 IERASRVFVEMST-RTLISWTSMITGFANH 467
I+ A + M R + W S++ H
Sbjct: 447 IKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/696 (33%), Positives = 380/696 (54%), Gaps = 27/696 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C L IHAH G H D FV T L+++Y +C A+ VF +
Sbjct: 102 TFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKM 161
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
P +VV+W ++++GY + AI LDM + G P TL + L + ++ G
Sbjct: 162 PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQG 221
Query: 195 KQIHAYVVKY---QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
IHAY ++ Q E+ +G +L +Y+ C L A + F+ + +N ++W+ +IG
Sbjct: 222 TSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGF 281
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS---VCGTMLSLRVGAQVHSLGIKLGYA 308
+ F ML EG+ + TS++S VC ++ L +G Q+H+L K G
Sbjct: 282 VLCDRMTEAFNLFKDMLVEGL--CFLSATSVASALRVCASLADLHMGTQLHALIAKSGIH 339
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++L NS++ +Y K GL++EA FD ++ + +++ A+++G Q NG
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQ------------NG 387
Query: 369 -GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA +F K+ + M+PD+ T S++ CS L AL+ G+ H + G + +
Sbjct: 388 KAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICN 447
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+L++MY KCG+I+ + +VF +M R ++SW +MI G+ H L +A LF M G P
Sbjct: 448 SLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAP 507
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTF+ +AACS++G+V E +F+ M +Y I P M+HY+C++D+ R G ++EA+ F
Sbjct: 508 DDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQF 567
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I+ M + + +W + CR H N++LG + + KL P+ ++ +L +IF +AGR+
Sbjct: 568 IQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRF 627
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
++ A V+ + + + ++ +SWI I +++F D HP S +I+ LD ++ K
Sbjct: 628 DEAAEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKL 687
Query: 668 GYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY+ SF L D +E A +YHSEKLAIAFG+L+ I V K+ +C DCH I
Sbjct: 688 GYQADTSFVLQDLEEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAI 747
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDFGVSF 758
K +T + R IIVRD+ R H F NG C+C +F +S
Sbjct: 748 KYMTLVRNRTIIVRDTNRFHHFKNGQCSCGNFWLSI 783
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 217/473 (45%), Gaps = 27/473 (5%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + A++VFD +P + ++ +LI Y AI ++ ML P T L
Sbjct: 48 GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
ACS+L +R G+ IHA+ D V +L LY C A F ++ ++V+
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W ++ +G + M G++PN TL S+ + +L G +H+
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227
Query: 302 GIKLGYASN---LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++ N + + +++ +Y KC + A ++F GM N VTW+A+I G +
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRM 287
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGM-KPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
TEA ++F + G+ + +S L +C+ L L G Q+HAL K+
Sbjct: 288 -----------TEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKS 336
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G +D+ +L++MY K G I A+ F E++ + IS+ ++++G + + +A +F
Sbjct: 337 GIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVF 396
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV-MDHYMC--LIDM 534
+ M + P+ T V + ACS+ AL + + I+ + ++ +C LIDM
Sbjct: 397 KKMQACNMEPDIATMVSLIPACSHLA----ALQHGKCSHGSVIIRGLALETSICNSLIDM 452
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
+ + G I+ + KM + V W+ IAG HG LG A L +K
Sbjct: 453 YAKCGKIDLSRQVFDKMPAR-DVVSWNTMIAGYGIHG---LGKEATTLFLGMK 501
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 2/282 (0%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S S L+ C + L +HA I K+G H D L+++Y K G + EA
Sbjct: 305 LSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMF 364
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + +S+ +L+SG VQN + E A VF M P T+ + + ACS L ++
Sbjct: 365 FDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAAL 424
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ GK H V+ +TS+ NSL +Y+ CG ++ + + F+++ ++V+SW T+I
Sbjct: 425 QHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGY 484
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASN 310
G +G + F M ++G P++ T + + C + G ++ K G
Sbjct: 485 GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPR 544
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ ++ L + GL+DEA + M ++ W A++
Sbjct: 545 MEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGA 586
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 237/718 (33%), Positives = 384/718 (53%), Gaps = 55/718 (7%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDN 134
+SLL C K+L + IIHA ++KTG H + ++ L+ + + A VFD
Sbjct: 6 LSLLHXC---KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ ++ W ++ G+ +S P A+ +++ M+ G P + T L +C+ + + G
Sbjct: 63 IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLY-------------------------------STC 223
+Q+H V+K+ + D + SL S+Y ++
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G + SA K F+ I K+V+SW I E G + L F KM+ ++P+E T+ ++
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
S C S+ +G QVHS G+ NL++ N+++ LY KCG ++ A LF G+S+ +++
Sbjct: 243 SACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI 302
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WN +I G+ M N EAL +F + SG KP+ T SIL+ C+ L A
Sbjct: 303 SWNTLIGGYTHM-----------NLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGA 351
Query: 404 LEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
++ G IH K G + + T+L++MY KCG IE A +VF M R+L SW +MI
Sbjct: 352 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
GFA H ++ A +F M G+ P+ +TFVG L+ACS++GM+ F M ++YK+
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKL 471
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
P ++HY C+ID+ G +EA I M+ EP+ VIW + C+ HGN+ELG A+
Sbjct: 472 MPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQ 531
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
L+K++P++ SY +L +I+ +A RW +VA + L ++ + + S I I V+ F
Sbjct: 532 NLIKIEPENPGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 591
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFG 696
D HP++ EI+ +L+E+ + G+ S L + +E A +HSEKLAIAFG
Sbjct: 592 IGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFG 651
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+C D+
Sbjct: 652 LISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDY 709
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 59 FQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + + K S+ V++L C S+ +H+ I G + ++
Sbjct: 216 YKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNA 275
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG +E A +F L +V+SW +LI GY + + A+ +F DML +G P
Sbjct: 276 LIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPN 335
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+VT+ + L+AC+ L +I +G+ IH Y+ K + +S+ SL +Y+ CG + +A +
Sbjct: 336 DVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQV 395
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + +++ SW +I +G A FS+M GI+P++ T + S C L
Sbjct: 396 FDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 455
Query: 293 RVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + S+ L ++ L GL EA+K+ + M
Sbjct: 456 DLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTM 501
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/647 (35%), Positives = 368/647 (56%), Gaps = 29/647 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGN-MEEAQKVFDN 134
Y ++++ C N + +I ++KTG + D V L++++ K N E A KVFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ +NVV+WT +I+ +Q P AI FLDM+ +G TL + +AC+ LE++ LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+Q+H++ ++ DD V SL +Y+ C GS++ K F+R+++ +VMSWT +I
Sbjct: 289 RQLHSWAIRSGLADD--VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGY 346
Query: 252 GENGE-AVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+N A + + FS+M+++G ++PN FT +S CG + RVG QV K G AS
Sbjct: 347 MQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLAS 406
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V NS++ +++KC +++A+ F+ +S NLV++N + G + +D
Sbjct: 407 NSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFE---------- 456
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
A + S++ + +TF+S+L+ + + +L +GEQIH+ LK G + V AL
Sbjct: 457 -HAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNAL 515
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG I+ ASRVF M R +ISWTSMITGFA H + + L+ F M GV+PN+
Sbjct: 516 ISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNE 575
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT+V L+ACS+ G+V E +F M +++KIKP M+HY C++D+ R G + +AF+FI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M F+ + ++W F+ CR H N ELG AA ++L+ P + +Y L +I+ SAG+WE+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEE 695
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ +E L + SWI + DKV+ F D HP + +I+ LD L+ + K GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGY 755
Query: 670 KQQESFELTDEESASVY---------HSEKLAIAFGLLNTPIVSPIL 707
L E HSEK+A+AFGL++T P++
Sbjct: 756 VPDTDLVLHKLEEEDDEAKKEMLLYQHSEKIAVAFGLISTAKSRPMI 802
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 279/535 (52%), Gaps = 29/535 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ SLL+ C+ + +++HA +++ D + L+++Y K G++ +A+ VF+ +
Sbjct: 64 TFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETM 123
Query: 136 PRI---NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
R +VVSW+++++ + N + AI +F++ LE G P + + ACS+ + +
Sbjct: 124 GRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVG 183
Query: 193 LGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGA 250
+G+ I +++K E D VG SL ++ S +A K F+++ E NV++WT +I
Sbjct: 184 VGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITR 243
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
C + G + +RFF M+ G + ++FTL+S+ S C + +L +G Q+HS I+ G A +
Sbjct: 244 CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD 303
Query: 311 LRVRNSIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
V S++ +Y KC G VD+ +K+FD M ++++W A+I G+ Q +LA
Sbjct: 304 --VECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLA-------- 353
Query: 368 GGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
TEA+++FS++ + G ++P+ +TFSS C + G+Q+ K G S+ V
Sbjct: 354 --TEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVS 411
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
++++M+ KC R+E A F +S + L+S+ + + G + A +L ++ +
Sbjct: 412 NSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELG 471
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA 544
+ TF L+ +N G + + ++ + K+ + +C LI M+ + G I+ A
Sbjct: 472 VSAFTFASLLSGVANVGSLRKGE---QIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAML 597
MD N + W+ I G +HG E Q+ K +KP + A+L
Sbjct: 529 SRVFSLMD-NRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAIL 582
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/454 (29%), Positives = 225/454 (49%), Gaps = 32/454 (7%)
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGK 195
RINV LI ++ A+ M G P + VT + L +C RLGK
Sbjct: 25 RINVAD--RLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGK 82
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF---NRIREKNVMSWTTVIGACG 252
+HA +++++ E D+ + NSL SLYS G L A F R +++V+SW+ ++ G
Sbjct: 83 LVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFG 142
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNL 311
NG ++ F + L G+ PN++ T++ C + VG + +K G + S++
Sbjct: 143 NNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDV 202
Query: 312 RVRNSIMYLYLKC-GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V S++ +++K + A K+FD MS +N+VTW MI QM
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM-----------GFPR 251
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA+ F + SG + D +T SS+ + C+ L L G Q+H+ +++G D V +LV
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--VECSLV 309
Query: 431 NMYKKC---GRIERASRVFVEMSTRTLISWTSMITGF-ANHSLSHQALQLFEDMLLAG-V 485
+MY KC G ++ +VF M +++SWT++ITG+ N +L+ +A+ LF +M+ G V
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHV 369
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK--IKPVMDHYMCLIDMFVRLGCIEE 543
PN TF A AC N V + +++ +K + +I MFV+ +E+
Sbjct: 370 EPNHFTFSSAFKACGN---VSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMED 426
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
A + + E N V ++ F+ G R+ + E F
Sbjct: 427 ARTAFESLS-EKNLVSYNTFLDGTCRNLDFEHAF 459
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 117/211 (55%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S + C N + + H K G + V +++++ KC ME+A+ F++L
Sbjct: 375 TFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESL 434
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N+VS+ + + G +N E A + ++ E + T + L+ +++ S+R G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGE 494
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIH+ V+K + V N+L S+YS CGS+++A + F+ + +NV+SWT++I ++G
Sbjct: 495 QIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHG 554
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A + L F++M EG++PNE T +I S C
Sbjct: 555 FAERVLETFNQMTKEGVKPNEVTYVAILSAC 585
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 8/228 (3%)
Query: 55 RSLGFQEALSVLTEGPK----VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+L F+ A +L+E + V ++ SLL N SL E IH+ ++K G +
Sbjct: 451 RNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQP 510
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+++Y KCG+++ A +VF + NV+SWTS+I+G+ ++ E + F M + G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEG 570
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P VT L+ACS + + G + ++ ++ + + L G L A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ N + + +V+ W T +GAC + G K+L PNE
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--FDPNE 676
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/714 (31%), Positives = 395/714 (55%), Gaps = 30/714 (4%)
Query: 59 FQEALSVLTEGP----KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ +A+ + +E K+ SY +L C K + ++IH + G Q F+
Sbjct: 91 YHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNL 150
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KC ++ A+ +F++ ++ VSW SLI+GY + E + + + M G
Sbjct: 151 LIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLN 210
Query: 175 NVTLGTALTACS-SLES-IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
TLG+AL +C +L + + GK +H Y VK + D VG +L +Y+ G L AI+
Sbjct: 211 AFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQL 270
Query: 233 FNRIREKNVMSWTTVIGACGENGE-----AVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
F +NV+ + +I + + A + L+ FS+M +GI+P++FT +SI +C
Sbjct: 271 FRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICN 330
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ + G Q+H+ K S+ + ++++ LY G ++ K F+ +++V+W
Sbjct: 331 HIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTT 390
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
MIAG+AQ NG E AL++F +L +SG KPD + +++L+ C+ + A
Sbjct: 391 MIAGYAQ------------NGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERS 438
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
GEQ+H +KTG + +V + ++MY K G ++ A F E+ ++SW+ MI A
Sbjct: 439 GEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQ 498
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H + A+ LFE M G+ PNQ+TF+G L ACS+ G+V E L Y+E M+K+Y +K +
Sbjct: 499 HGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVK 558
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
H C++D+ R G + +A +FI F + V+W ++GCR + ++ G + AE+L++L
Sbjct: 559 HCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIEL 618
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
P++ SY +L +I+ AG ++ L ++ + + SWI + ++V+SF D
Sbjct: 619 DPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQSWIEVGNEVHSFVVGDIS 678
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQ--ESFELTDEESASV----YHSEKLAIAFGLLNT 700
HP S I+K L+ ++EK + GY Q ++ ++ +E +HSEKLA++FG+++
Sbjct: 679 HPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLGVNHHSEKLAVSFGIVSL 738
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P +P+ V+K+ +C DCH +K+I+ + REII+RDS R H F G C+C D+
Sbjct: 739 PPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHHFKEGSCSCNDY 792
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 244/518 (47%), Gaps = 40/518 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ + +Y L+Q S + ++ HAH++KT + F++ +N+Y K G M AQK+
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + +V+S+ LISGY AI +F + A + L+AC ++
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK IH + + N L +Y C ++ A F E + +SW ++I
Sbjct: 127 ALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGY 186
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV--GAQVHSLGIKLGYAS 309
G + L+ KM G++ N FTL S C L+ V G +H +K G
Sbjct: 187 ARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDL 246
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V +++ +Y K G + +A +LF + N+V +NAMIAG Q D+ K+
Sbjct: 247 DIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKE------CA 300
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL +FS++ G+KP +TFSSI+ IC+ + A E G+QIHA K SD +G+ L
Sbjct: 301 YEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTL 360
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ +Y G E + F ++SWT+MI G+A + AL LF ++L +G +P++
Sbjct: 361 IELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDE 420
Query: 490 VTFVGALAACSNAG-----------MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
L+AC++ V +G ++Q I M+ +
Sbjct: 421 FIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQ------------ISMYAKS 468
Query: 539 GCIEEAFDFIKKMDFE----PNEVIWSVFIAGCRRHGN 572
G ++ A K+ FE P+ V WSV I +HG+
Sbjct: 469 GNLDSA-----KITFEEIKNPDVVSWSVMICSNAQHGH 501
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 206/419 (49%), Gaps = 37/419 (8%)
Query: 172 YPTNVTLGTALTACSSLESIRL-GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+P + T L SS + GK HA+++K + N+ +LYS G + +A
Sbjct: 5 FPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQ 64
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
K F+R+ E++V+S+ +I G G + + FS+ ++ ++F+ + S CG +
Sbjct: 65 KLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIK 124
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+G +H L I G + + N ++ +Y KC +D A+ LF+ ++ V+WN++I
Sbjct: 125 DFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLIT 184
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC----SRLVALEQ 406
G+A++ E L + K++ +G++ + +T S L C + +V+
Sbjct: 185 GYARV-----------GAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSY-- 231
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF-- 464
G+ +H T+K G D+VVGTAL++MY K G + A ++F + ++ + +MI GF
Sbjct: 232 GKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQ 291
Query: 465 ---ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY-K 520
+ +++AL+LF M G++P+ TF + C++ EA Y + + K
Sbjct: 292 TEDIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHI----EAFEYGKQIHAHICK 347
Query: 521 IKPVMDHYM--CLIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
D ++ LI+++ LG E+ F+ K+D V W+ IAG ++G E
Sbjct: 348 HNIQSDEFIGSTLIELYSLLGSTEDQLKCFNSTPKLDI----VSWTTMIAGYAQNGQFE 402
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 10/232 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG E +L ++ +L G K ++L C + + + E +H + VKTG
Sbjct: 398 NGQFESALALFYE----LLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGT 453
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
V +++Y K GN++ A+ F+ + +VVSW+ +I Q+ + AI++F M
Sbjct: 454 LAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMK 513
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSL 226
G +P +T LTACS + G + + + K Y + + + L S G L
Sbjct: 514 SYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRL 573
Query: 227 NSAIKAF--NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
A K F N + + W T++ C + V G K++ + P E
Sbjct: 574 LDA-KNFILNSGFGDHPVMWRTLLSGCRIYKDIVTGKHVAEKLIE--LDPQE 622
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/667 (34%), Positives = 363/667 (54%), Gaps = 18/667 (2%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
EII A V+ G H +V + +VN K G + +AQKVFD +P +VV W S+I GYVQ
Sbjct: 166 EIIRA-AVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQK 224
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+I +FL+M+ G P+ VT+ L AC ++G H+YV+ +D V
Sbjct: 225 GLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVL 284
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
SL +YS G SA F+ + ++++SW +I +NG + F +++ G
Sbjct: 285 TSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSG 344
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
+ TL S+ C L G +HS I+ S+L + +I+ +Y KCG + +A +
Sbjct: 345 FDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIV 404
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M N++TW AM+ G LS + +AL +F ++ + + T S
Sbjct: 405 FGRMGKKNVITWTAMLVG-----------LSQNGYAEDALKLFCQMQEEKVAANSVTLVS 453
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV-EMSTR 452
++ C+ L +L +G +HA ++ G+ D V+ +AL++MY KCG+I A ++F E +
Sbjct: 454 LVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLK 513
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+I SMI G+ H AL ++ M+ ++PNQ TFV L ACS++G+V E F
Sbjct: 514 DVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALF 573
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M++++ ++P HY CL+D+ R G +EEA + +K+M F+P+ + ++GCR H N
Sbjct: 574 HSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKN 633
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+G A++L+ L + Y ML +I+ A +WE V ++ L R + + + +S I
Sbjct: 634 TNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIE 693
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----H 687
+ +KVY+F +D HP A+I+++L+ L + + GY S L D E V H
Sbjct: 694 VGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGH 753
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LAIAFGLL+TP S I + K+ +C DCHN K I+ + REIIVRD+ R H FVNG
Sbjct: 754 SERLAIAFGLLSTPCGSLIKITKNLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNG 813
Query: 748 HCTCRDF 754
C+C DF
Sbjct: 814 KCSCNDF 820
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 279/594 (46%), Gaps = 34/594 (5%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S + SLL + N +L + + IHA I+K + F+ L+ VY G + A+ VFD
Sbjct: 47 SVFSSLLHQFSN--TLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQ 104
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
++I+G+++N Q +F M + T AL AC+ L +G
Sbjct: 105 CSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVG 164
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+I V+ VG+S+ + G L A K F+ + EK+V+ W ++IG +
Sbjct: 165 MEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQK 224
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + ++ F +M+ G++P+ T+ ++ CG +VG HS + LG +++ V
Sbjct: 225 GLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVL 284
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEAL 373
S++ +Y G A +FD M +L++WNAMI+G+ Q NG E+
Sbjct: 285 TSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQ------------NGMIPESY 332
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++F +L SG D T S++ CS+ LE G +H+ ++ S +V+ TA+V+MY
Sbjct: 333 ALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMY 392
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I++A+ VF M + +I+WT+M+ G + + + AL+LF M V N VT V
Sbjct: 393 SKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLV 452
Query: 494 GALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+ C++ G + + + ++ Y V+ LIDM+ + G I A +
Sbjct: 453 SLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITS--ALIDMYAKCGKIHSAEKLFNN-E 509
Query: 553 FEPNEVIWS---VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
F +VI + G HG LG Y+ +LKP ++L S E
Sbjct: 510 FHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEG 569
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A+ ++ R+ +R + K Y+ + LH ++ + + DELV++
Sbjct: 570 KALFHSMERDHD---------VRPQHKHYACLVD--LHSRAGRLEEA-DELVKQ 611
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 141/275 (51%), Gaps = 2/275 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ G + + VSL++ C L N I+H+ I++ + T +V++Y KCG
Sbjct: 338 LVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGA 397
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+++A VF + + NV++WT+++ G QN E A+ +F M E +VTL + +
Sbjct: 398 IKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHC 457
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-NRIREKNVMS 243
C+ L S+ G+ +HA+ +++ D + ++L +Y+ CG ++SA K F N K+V+
Sbjct: 458 CAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVIL 517
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLG 302
++I G +G L +S+M+ E ++PN+ T S+ + C + G A HS+
Sbjct: 518 CNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSME 577
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ ++ L+ + G ++EA +L M
Sbjct: 578 RDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQM 612
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/698 (31%), Positives = 373/698 (53%), Gaps = 23/698 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G +V +Y + L C L + +HA V G F+ L ++Y CG M EA
Sbjct: 98 GLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEA 157
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++VFD + VSW SL+SGYV+ E + VF M G + LG+ + C+S
Sbjct: 158 RRVFDAAEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASG 217
Query: 189 ESI--RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ + + +H VVK + D + +++ +Y+ G+L +A+ F + + NV+ +
Sbjct: 218 SDVGRHIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNA 277
Query: 247 VIGACGENGEAV------QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+I + AV + L +S+M S G+QP+EFT +SI C G Q+H
Sbjct: 278 MIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHG 337
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+K + + + ++++ LY G +++ + F + ++VTW +MI+G Q K
Sbjct: 338 QVLKHSFHDDDYIGSALIDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEK 397
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
AL +F + G+KPDL+T SS++ C+ L GEQI L +K GF
Sbjct: 398 -----------ALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFN 446
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+G + ++M + G ++ +R F EM +R ++SW+++I+ A H + AL++F +M
Sbjct: 447 RFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEM 506
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+ A V PN+VTF+ L ACS+ G+V + L Y+E+M+ EY + P + H C++D+ R G
Sbjct: 507 MNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGR 566
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ +A FI+ F + V+W +A CR HG+ME G A+Q++ L+P SY +L ++
Sbjct: 567 LADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADQIMDLEPTSSASYVILYNM 626
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
++ AG + ++L +E + + SWI ++ V+SF D HP+S I+K L E+
Sbjct: 627 YLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFVAGDKSHPESNAIYKKLAEM 686
Query: 661 VEKAKCFGYKQQESFE----LTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ K + S + E++ HSEK+A+AFG+++ P +PI V+K+ +CR
Sbjct: 687 LSKIEKLANTDNASTGSDGISSSEQNLVGCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCR 746
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ +K+I+ REII+RD R H F G C+C D+
Sbjct: 747 DCHSTMKLISGSENREIILRDGIRFHHFRGGSCSCGDY 784
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 146/503 (29%), Positives = 246/503 (48%), Gaps = 21/503 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK--CGNMEEAQKVFDN 134
Y+ LL+ C +L + +HAHI + F+ L+ Y + G A ++ D
Sbjct: 5 YLDLLRSCT---ALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDE 61
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTNVTLGTALTACSSLESIRL 193
+PR N VS+ LIS Y + P A+ F A G T AL ACS +R
Sbjct: 62 MPRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRT 121
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GK +HA V + + NSL S+Y++CG + A + F+ E + +SW +++
Sbjct: 122 GKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVR 181
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC--GTMLSLRVGAQVHSLGIKLGYASNL 311
G + L+ FS M G+ N F L SI C G+ + + VH +K G ++L
Sbjct: 182 AGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL 241
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ ++++ +Y K G + A LF + N++ +NAMIAG + ++S E
Sbjct: 242 FLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVS-----RE 296
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
ALS++S++ S GM+P +TFSSIL C+ G+QIH LK F D +G+AL++
Sbjct: 297 ALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALID 356
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y G +E R F + + +++WTSMI+G + L +AL+LF++ + G++P+ T
Sbjct: 357 LYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFT 416
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK- 550
+ AC++ + E +Q IK + + + + F+ + D + +
Sbjct: 417 MSSVMNACASLAVARTG----EQIQC-LAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRR 471
Query: 551 -MDFEPNEVI-WSVFIAGCRRHG 571
+ E +V+ WS I+ +HG
Sbjct: 472 FQEMESRDVVSWSAVISSHAQHG 494
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 162/312 (51%), Gaps = 6/312 (1%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EALS+ +E G + ++ S+L+ C + IH ++K H D ++ + L
Sbjct: 295 REALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSAL 354
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y G ME+ + F +LP+ ++V+WTS+ISG VQN E A+ +F + + G P
Sbjct: 355 IDLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDL 414
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ + + AC+SL R G+QI +KY T++GNS + + G +++ + F
Sbjct: 415 FTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQE 474
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++V+SW+ VI + ++G A LR F++M++ + PNE T ++ + C + G
Sbjct: 475 MESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDG 534
Query: 296 AQVHS-LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHA 353
+ + + + G + ++ ++ L + G + +A+ D H + V W +++A
Sbjct: 535 LRYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCR 594
Query: 354 QMMDLAKDDLSA 365
D+ + L A
Sbjct: 595 IHGDMERGQLVA 606
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/694 (32%), Positives = 378/694 (54%), Gaps = 21/694 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V SY + L C L +HA + G FV LV++Y KCG M EA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++VFD + VSW SL+SGYV+ E + VF M G + LG+ + CS
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223
Query: 189 E--SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++ + + +H V+K + D + +++ +Y+ G+L A F ++E NV+ + T
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283
Query: 247 VI-GACGEN---GEAV--QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+I G C G+ V + L +S++ S G+QP EFT +S+ C L G Q+H
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
IK + + + ++++ LY G +++ + F ++VTW AM++G Q
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ------ 397
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
++L +ALS+F + +G+KPDL+T SS++ C+ L GEQI K+GF
Sbjct: 398 NELH-----EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
V+G + V+MY + G ++ A+R F EM + ++SW+++I+ A H + AL F++M
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM 512
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+ A V PN++TF+G L ACS+ G+V E L Y+E M K+Y + P + H C++D+ R G
Sbjct: 513 VDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGR 572
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ +A FI F + VIW +A CR H ++E G A ++++L+P SY +L ++
Sbjct: 573 LADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNM 632
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
++ AG + ++L ++ + + SWI +K V+SF D HP+S+ I+ L+E+
Sbjct: 633 YLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Query: 661 VEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
+ + + E + E++ HSEKLA+A G+++ P +PI V+K+ +CRDCH+
Sbjct: 693 LSRIEKLATTDTEISK--REQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHS 750
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+I+ REII+RD R H F +G C+C D+
Sbjct: 751 TMKLISKSENREIILRDPIRFHHFRDGSCSCADY 784
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 251/521 (48%), Gaps = 28/521 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y+ LL+ C + + + A S F+ L+ Y + G A+++ D +P
Sbjct: 14 YLHLLRACTSLRHAAAVHAHIARAHPAAS---LFLRNTLLAAYCRLGGPLPARRLLDEMP 70
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
R N VS+ LI Y + L++ AG + AL ACS +R G+
Sbjct: 71 RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+HA + V NSL S+YS CG + A + F+ E++ +SW +++ G
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVC-----GTMLSLRVGAQVHSLGIKLGYASNL 311
+ +R F+ M G+ N F L S+ C GTM + VH IK G S++
Sbjct: 191 REEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTM---DIAEAVHGCVIKAGLDSDV 247
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ ++++ +Y K G + EA LF + N+V +N MIAG + + +++ +E
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVA-----SE 302
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL+++S++ S GM+P +TFSS+L C+ LE G+QIH +K F D +G+AL++
Sbjct: 303 ALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALID 362
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y G +E R F +++WT+M++G + L +AL LF + L AG++P+ T
Sbjct: 363 LYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFT 422
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFDF 547
+ AC++ + E +Q + K D + + + M+ R G ++ A
Sbjct: 423 ISSVMNACASLAVARAG----EQIQC-FATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477
Query: 548 IKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLKLK 587
++M E ++V+ WS I+ +HG + ++++ K
Sbjct: 478 FQEM--ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAK 516
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 159/313 (50%), Gaps = 6/313 (1%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL++ +E G + ++ S+L+ C L + IH ++K +D F+ + L+
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y G ME+ + F + P+ ++V+WT+++SG VQN E A+ +F + L AG P
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ + + AC+SL R G+QI + K + T +GNS +Y+ G +++A + F +
Sbjct: 422 TISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM 481
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+V+SW+ VI ++G A L FF +M+ + PNE T + + C + G
Sbjct: 482 ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGL 541
Query: 297 QVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQ 354
+ + K G + ++ ++ L + G + +A+ + + H + V W +++A
Sbjct: 542 RYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRI 601
Query: 355 MMDLAKDDLSAHN 367
DL + L A+
Sbjct: 602 HRDLERGQLVANR 614
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 343/602 (56%), Gaps = 15/602 (2%)
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
+ C ++ E++H + VKTG FV + L+++Y K G + E ++VF +P NVV
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SWT++I+G V+ + A+ F +M + + T AL AC+ ++ G++IHA
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
+K + + V N+L ++Y+ CG L + F ++ ++V+SWTT+I + G+ +
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
+ F +M + PNE+T ++ S C + + G Q+H+L + LG A++L V NSIM +Y
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKL 379
KCG + + +F M+ ++V+W+ +IAG++Q GG +EA + S +
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ-------------GGHVSEAFELLSWM 410
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
G KP + +S+L+ C + LE G+Q+HA L G +V +AL+NMY KCG I
Sbjct: 411 RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E ASR+F ++SWT+MI G+A H S + + LFE + G+RP+ VTF+G L+AC
Sbjct: 471 EEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC 530
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S+AG+V YF M K+Y+I P +HY C+ID+ R G + +A I+ M F ++V+
Sbjct: 531 SHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV 590
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
WS + CR HG++E G AE++L+L+P ++ L +I+ S G+W + A ++ L +
Sbjct: 591 WSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKS 650
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD 679
+ + + WSWI++KD V++F D HPQ +I+ +LD L + + Q+ F D
Sbjct: 651 KGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYD 710
Query: 680 EE 681
E
Sbjct: 711 LE 712
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/592 (25%), Positives = 276/592 (46%), Gaps = 64/592 (10%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
ALS+ G ++ T+ V+ EC++ + L + + + S D + K
Sbjct: 3 ALSIRALGRRLFTAPAVAS-TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVK 61
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGT 180
G++ A+++FD + + + +SWT+LISGYV + A+ +F +M +E+G L
Sbjct: 62 TGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSL 121
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
A AC + G+ +H Y VK + VG++L +Y+ G + + F+ + +N
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 181
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+SWT +I G + L +FS+M ++ + +T C +L G ++H+
Sbjct: 182 VVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHA 241
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+K G+ + V N++ +Y KCG ++ LF+ MS ++V+W +I QM
Sbjct: 242 QAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQM----- 296
Query: 361 DDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
G E A+ F ++ S + P+ YTF+++++ C+ L +E GEQ+HAL L G
Sbjct: 297 --------GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ + V +++ MY KCG++ +S +F EM+ R ++SW+++I G++ +A +L
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLS 408
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDM 534
M + G +P + L+AC N ++ Y + ++H LI+M
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHG-----KQLHAYVLSIGLEHTAMVLSALINM 463
Query: 535 FVRLGCIEEA----------------------------------FDFIKKMDFEPNEVIW 560
+ + G IEEA F+ I ++ P+ V +
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 561 SVFIAGCRRHGNMELGFY---AAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++ C G ++LGF A + ++ P E Y ++D+ AGR D
Sbjct: 524 IGVLSACSHAGLVDLGFRYFNAMSKKYQISPSK-EHYGCMIDLLCRAGRLSD 574
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 218/441 (49%), Gaps = 19/441 (4%)
Query: 54 VRSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR+ +EAL +E +V+ SY L+ C + +L+ IHA +K G
Sbjct: 193 VRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSS 252
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV L +Y KCG +E +F+ + +VVSWT++I+ VQ Q E A+ F+ M E+
Sbjct: 253 FVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRES 312
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P T ++ C++L I G+Q+HA ++ SV NS+ ++Y+ CG L S+
Sbjct: 313 DVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSS 372
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+ + ++++SW+T+I + G + S M EG +P EF L S+ S CG M
Sbjct: 373 SVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNM 432
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G Q+H+ + +G V ++++ +Y KCG ++EA ++FD + ++V+W AMI
Sbjct: 433 AILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI 492
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-E 408
G+A+ H E + +F K+ G++PD TF +L+ CS ++ G
Sbjct: 493 NGYAE-----------HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFR 541
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
+A++ K ++++ + GR+ A + M R + W++++ H
Sbjct: 542 YFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 601
Query: 468 SLSHQALQLFEDMLLAGVRPN 488
+ + E +L + PN
Sbjct: 602 GDVERGRRTAERIL--QLEPN 620
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/738 (31%), Positives = 390/738 (52%), Gaps = 36/738 (4%)
Query: 39 RSGSKLIQLNGNSEPVRSL-GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIH 97
R+ + LI+ +S P + G +L ++ L+ C IH
Sbjct: 89 RTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHHCGRAIH 148
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPE 157
H + G D FV T L+++Y KC + +A +F +P ++V+W ++++GY +
Sbjct: 149 RHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYH 208
Query: 158 LAIHVFLDMLEAGNY--PTNVTLGTALTACSSLESIRLGKQIHAYVV----------KYQ 205
A+ L M + P TL L + ++ G +HAY + K +
Sbjct: 209 HAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSK 268
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D +G +L +Y+ CGSL A + F+ + +N ++W+ +IG Q F
Sbjct: 269 LTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQAFLLFK 328
Query: 266 KMLSEGIQPNEFTLTSISSV---CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
ML++G+ + TSI+S C ++ LR+G Q+H+L K G ++L NS++ +Y
Sbjct: 329 AMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYA 386
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS 381
K GL+D+A LFD M+ + V+++A+++G+ Q NG EA +F K+ +
Sbjct: 387 KAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ------------NGRAEEAFLVFKKMQA 434
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
++PD T S++ CS L AL+ G H + G S+ + AL++MY KCGRI+
Sbjct: 435 CNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDL 494
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+ +VF M +R ++SW +MI G+ H L +A LF +M G P+ VTF+ L+ACS+
Sbjct: 495 SRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSH 554
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+G+V E +F +M Y + P M+HY+C++D+ R G ++EA++FI+ M + +W
Sbjct: 555 SGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWV 614
Query: 562 VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+ CR + N++LG + + +L P+ ++ +L +I+ +AGR+++ A V+ + + +
Sbjct: 615 ALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQG 674
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-- 679
++ SWI I +++F D HPQS EI++ LD ++ K GY+ SF L D
Sbjct: 675 FKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDLE 734
Query: 680 ---EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+E A + HSEKLAIA+G+L+ I V K+ +C DCH IK I+ + R IIVR
Sbjct: 735 EEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHISLVKRRAIIVR 794
Query: 737 DSKRLHKFVNGHCTCRDF 754
D+ R H F NG C+C DF
Sbjct: 795 DANRFHHFKNGQCSCGDF 812
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/514 (26%), Positives = 237/514 (46%), Gaps = 59/514 (11%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA--IHVFLDMLEAGNYPTNVTLGT 180
G++ A +FD +P +V ++ LI Y +S A +H++ ML P N T
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
AL ACS+L G+ IH + + + D V +L +Y C L A F + ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 241 VMSWTTVIGACGENG---EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++W ++ +G AV L +M ++PN TL ++ + +L G
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249
Query: 298 VHSLGIKLGYASNLRVRNS-------------IMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
VH+ I+ N RNS ++ +Y KCG + A+++FD M N VT
Sbjct: 250 VHAYCIRACLHPN---RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG---MKPDLYTFSSILTICSRL 401
W+A+I G + T+A +F + + G + P + +S L C+ L
Sbjct: 307 WSALIGGFVLCSRM-----------TQAFLLFKAMLAQGLCFLSPT--SIASALRACASL 353
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
L GEQ+HAL K+G +D+ G +L++MY K G I++A +F EM+ + +S+++++
Sbjct: 354 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALV 413
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+G+ + + +A +F+ M V P+ T V + ACS+ AL + I
Sbjct: 414 SGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH----LAALQHGRCSHGSVII 469
Query: 522 KPVM-DHYMC--LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ + + +C LIDM+ + G I+ + F+ + D V W+ IAG HG L
Sbjct: 470 RGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI----VSWNTMIAGYGIHG---L 522
Query: 576 GFYAAEQLLKLK----PKDCESYAMLLDIFVSAG 605
G A L++ P D ++ LL +G
Sbjct: 523 GKEATALFLEMNNLGFPPDGVTFICLLSACSHSG 556
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 26/289 (8%)
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
++ G + A LFD + ++ T+N +I ++ S+ + L ++ ++
Sbjct: 67 HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSS---------SSPTAAADGLHLYRRML 117
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+ P+ YTF L CS L G IH + G +D+ V TAL++MY KC +
Sbjct: 118 RHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLP 177
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ--LFEDMLLAGVRPNQVTFVGALAA 498
A+ +F M R L++W +M+ G+A+H + H A+ L M + +RPN T V L
Sbjct: 178 DAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPL 237
Query: 499 CSNAGMVYEALGYFEMMQK---------EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+ G + + + + K+ + L+DM+ + G + A
Sbjct: 238 LAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFD 297
Query: 550 KMDFEPNEVIWSVFIAG---CRRHGNMELGFYA--AEQLLKLKPKDCES 593
M NEV WS I G C R L F A A+ L L P S
Sbjct: 298 AMPAR-NEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIAS 345
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/584 (35%), Positives = 332/584 (56%), Gaps = 18/584 (3%)
Query: 167 LEAGNYPTNVTL-GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
LE P + T L C+ + + G+ +HA++++ D +GN+L ++Y+ CGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A K F ++ +++ ++WTT+I ++ L FF++ML G PNEFTL+S+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
G Q+H +K G+ SN+ V ++++ LY + GL+D+AQ +FD + N V+W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
NA+IAGHA+ +G +AL +F + G +P ++++S+ CS LE
Sbjct: 231 NALIAGHAR-----------RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+ +HA +K+G G L++MY K G I A ++F ++ R ++SW S++T +A
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H +A+ FE+M G+RPN+++F+ L ACS++G++ E Y+E+M+K+ I P
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEA 398
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY+ ++D+ R G + A FI++M EP IW + CR H N ELG YAAE + +
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P D + +L +I+ S GRW D A V+ +E + + SW+ I++ ++ F ND
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNT 700
HPQ EI + +E++ K K GY S + D++ V YHSEK+A+AF LLNT
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
P S I + K+ +C DCH IK+ + + REIIVRD+ R H F
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHF 622
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 218/437 (49%), Gaps = 26/437 (5%)
Query: 46 QLNGNSEPVRSLGFQEALSVLTEGPKVQTSS--------------YVSLLQECVNRKSLS 91
+LN PV E+L + ++TSS Y +LL++C K L
Sbjct: 18 RLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLI 77
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
I+HAHI+++ D + L+N+Y KCG++EEA+KVF+ +P+ + V+WT+LISGY
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
Q+ +P A+ F ML G P TL + + A ++ G Q+H + VK + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG++L LY+ G ++ A F+ + +N +SW +I + L F ML +G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ F+ S+ C + L G VH+ IK G N+++ +Y K G + +A+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
K+FD ++ ++V+WN+++ +AQ H G EA+ F ++ G++P+ +F
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQ-----------HGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+LT CS L++G + L K G + + +V++ + G + RA R EM
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 452 R-TLISWTSMITGFANH 467
T W +++ H
Sbjct: 427 EPTAAIWKALLNACRMH 443
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 258/789 (32%), Positives = 393/789 (49%), Gaps = 105/789 (13%)
Query: 71 KVQTSSYVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
+V + Y + L C N S S A +H H++ +G ++ L+++Y K + A
Sbjct: 8 RVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYA 67
Query: 129 QKVFDNLPRINVVSWTSLISGY-----------VQNSQP--------------------- 156
+K+FD +P+ +V++ T+LI+ Y + N P
Sbjct: 68 RKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMND 127
Query: 157 -ELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGN 214
AI +F M A P + T + L+A + + R Q+H VVK+ E +V N
Sbjct: 128 GHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLN 187
Query: 215 SLCSLYSTCG---------SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV------- 258
+L S+Y C + SA K F+ + ++N WTT+I NG+
Sbjct: 188 ALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILD 247
Query: 259 ------------------------QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
L F KM G+Q +E T TS+ S C +
Sbjct: 248 TMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLL 307
Query: 295 GAQVHSLGIKLGYASN----LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
G QVH+ +K + L V N+++ LY K G VD A+K+F M +++TWN +++
Sbjct: 308 GKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLS 367
Query: 351 GH--AQMMDLAKDDLS-----------------AHNG-GTEALSIFSKLNSSGMKPDLYT 390
G+ A M+ AK + A NG G +AL +F+++ G +P+ Y
Sbjct: 368 GYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYA 427
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
F+ +T CS L ALE G Q+HA + G S + VG A++ MY +CG +E A +F+ M
Sbjct: 428 FAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMP 487
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+SW SMI H +A++L+E ML G+ P++ TF+ L+ACS+AG+V E
Sbjct: 488 FVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNR 547
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YF M + Y I P DHY +ID+F R G +A + I M FE IW +AGCR H
Sbjct: 548 YFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTH 607
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
GNM+LG AAE+L KL P+ +Y +L +++ S GRW DVA + L R+ + + SW
Sbjct: 608 GNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSW 667
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEES-----ASV 685
+++KV+ F +D +HP+ I+ L++L + K GY + L D ES A
Sbjct: 668 TEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALS 727
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLA+AFGL+ P + + V K+ +C DCHN IK ++ + REI+VRD KR H F
Sbjct: 728 THSEKLAVAFGLMKLPQGATVRVFKNLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFK 787
Query: 746 NGHCTCRDF 754
NG C+CR++
Sbjct: 788 NGECSCRNY 796
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/694 (32%), Positives = 378/694 (54%), Gaps = 21/694 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V SY + L C L +HA + G FV LV++Y KCG M EA
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++VFD + VSW SL+SGYV+ E + VF M G + LG+ + CS
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223
Query: 189 E--SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++ + + +H V+K + D + +++ +Y+ G+L A F ++E NV+ + T
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNT 283
Query: 247 VI-GACGEN---GEAV--QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+I G C G+ V + L +S++ S G+QP EFT +S+ C L G Q+H
Sbjct: 284 MIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHG 343
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
IK + + + ++++ LY G +++ + F ++VTW AM++G Q
Sbjct: 344 QVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQ------ 397
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
++L +ALS+F + +G+KPDL+T SS++ C+ L GEQI K+GF
Sbjct: 398 NELH-----EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFD 452
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
V+G + V+MY + G ++ A+R F EM + ++SW+++I+ A H + AL F++M
Sbjct: 453 RFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEM 512
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+ A V PN++TF+G L ACS+ G+V E L Y+E M K+Y + P + H C++D+ R G
Sbjct: 513 VDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGR 572
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ +A FI F + VIW +A CR H ++E G A ++++L+P SY +L ++
Sbjct: 573 LADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNM 632
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
++ AG + ++L ++ + + SWI +K V+SF D HP+S+ I+ L+E+
Sbjct: 633 YLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEM 692
Query: 661 VEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
+ + + E + E++ HSEKLA+A G+++ P +PI V+K+ +CRDCH+
Sbjct: 693 LSRIEKLATTDTEISK--REQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHS 750
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+I+ REII+RD R H F +G C+C D+
Sbjct: 751 TMKLISKSENREIILRDPIRFHHFRDGSCSCADY 784
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 251/521 (48%), Gaps = 28/521 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y+ LL+ C + + + A S F+ L+ Y + G A+++ D +P
Sbjct: 14 YLHLLRACTSLRHAAAVHAHIARAHPAAS---LFLRNTLLAAYCRLGGPLPARRLLDEMP 70
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
R N VS+ LI Y + L++ AG + AL ACS +R G+
Sbjct: 71 RRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRA 130
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+HA + V NSL S+YS CG + A + F+ E++ +SW +++ G
Sbjct: 131 VHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGA 190
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVC-----GTMLSLRVGAQVHSLGIKLGYASNL 311
+ +R F+ M G+ N F L S+ C GTM + VH IK G S++
Sbjct: 191 REEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTM---DIAEAVHGCVIKAGLDSDV 247
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ ++++ +Y K G + EA LF + N+V +N MIAG + + +++ +E
Sbjct: 248 FLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVA-----SE 302
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL+++S++ S GM+P +TFSS+L C+ LE G+QIH +K F D +G+AL++
Sbjct: 303 ALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALID 362
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y G +E R F +++WT+M++G + L +AL LF + L AG++P+ T
Sbjct: 363 LYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFT 422
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFDF 547
+ AC++ + E +Q + K D + + + M+ R G ++ A
Sbjct: 423 ISSVMNACASLAVARAG----EQIQC-FATKSGFDRFTVMGNSCVHMYARSGDVDAATRR 477
Query: 548 IKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLKLK 587
++M E ++V+ WS I+ +HG + ++++ K
Sbjct: 478 FQEM--ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAK 516
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL++ +E G + ++ S+L+ C L + IH ++K +D F+ + L+
Sbjct: 302 EALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALI 361
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y G ME+ + F + P+ ++V+WT+++SG VQN E A+ +F + L AG P
Sbjct: 362 DLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLF 421
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ + + AC+SL R G+QI + K + T +GNS +Y+ G +++A + F +
Sbjct: 422 TISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEM 481
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+V+SW+ VI ++G A L FF +M+ + PNE T + + C + G
Sbjct: 482 ESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGL 541
Query: 297 QVH-SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQ 354
+ + ++ G + ++ ++ L + G + +A+ +G+ H + V W +++A
Sbjct: 542 RYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRI 601
Query: 355 MMDLAKDDLSAHN 367
DL + L A+
Sbjct: 602 HRDLERGQLVANR 614
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/747 (30%), Positives = 397/747 (53%), Gaps = 47/747 (6%)
Query: 44 LIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT 103
LIQ + V+S + + + +Y + LQ+C+ + S + +H I+K
Sbjct: 8 LIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKR 67
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF 163
G D F L+N+Y K + +A K+FD +P N +S+ +LI GY ++ + AI +F
Sbjct: 68 GGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF 127
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
+ + G+ T L S + LG IHA + K E + VG +L YS C
Sbjct: 128 VRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVC 187
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G ++ A + F+ I K+++SWT ++ EN + L+ FS+M G +PN FT S+
Sbjct: 188 GRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVF 247
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C + + VG VH +K Y +L V +++ LY K G +D+A++ F+ + +++
Sbjct: 248 KACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVI 307
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
W+ MIA +AQ + EA+ +F ++ + + P+ +TF+S+L C+ +
Sbjct: 308 PWSFMIARYAQ-----------SDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEG 356
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L G QIH +K G SDV V AL+++Y KCGR+E + +F E R ++W ++I G
Sbjct: 357 LNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVG 416
Query: 464 FANHSLSHQALQLFEDML--------------------LAG-----------VRPNQVTF 492
+AL+LF +ML LA V+P+++TF
Sbjct: 417 HVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLTF 476
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
VG L+AC+NAG++ + YF M +++ I+P ++HY C++ + R G +++A I ++
Sbjct: 477 VGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIP 536
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
F+P+ ++W + C H ++ELG +A+++L+++P+D ++ +L +++ +A RW++VA
Sbjct: 537 FQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVAS 596
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V+ + + + + SWI + V+SF D HP+ I +L+ L K K GY
Sbjct: 597 VRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPN 656
Query: 673 ES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
+ ++ DEE + HSE+LA++FG++ TP SPI ++K+ +C DCH IK I+
Sbjct: 657 YNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCISK 716
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI+VRD R H F G C+C D+
Sbjct: 717 VVQREIVVRDINRFHHFQEGLCSCGDY 743
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 342/602 (56%), Gaps = 15/602 (2%)
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
+ C ++ E++H + VKTG FV + L+++Y K G + E ++VF +P NVV
Sbjct: 124 KACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SWT++I+G V+ + A+ F +M + + T AL AC+ ++ G++IHA
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQA 243
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
+K + + V N+L ++Y+ CG L + F ++ ++V+SWTT+I + G+ +
Sbjct: 244 MKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAV 303
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
+ F +M + PNE+T ++ S C + + G Q+H+L + LG A++L V NSIM +Y
Sbjct: 304 QAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMY 363
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKL 379
KCG + + +F M+ ++V+W+ +IAG+ Q GG +EA + S +
Sbjct: 364 AKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ-------------GGHVSEAFELLSWM 410
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
G KP + +S+L+ C + LE G+Q+HA L G +V +AL+NMY KCG I
Sbjct: 411 RMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSI 470
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E ASR+F ++SWT+MI G+A H S + + LFE + G+RP+ VTF+G L+AC
Sbjct: 471 EEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSAC 530
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S+AG+V YF M K+Y+I P +HY C+ID+ R G + +A I+ M F ++V+
Sbjct: 531 SHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV 590
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
WS + CR HG++E G AE++L+L+P ++ L +I+ S G+W + A ++ L +
Sbjct: 591 WSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKS 650
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD 679
+ + + WSWI++KD V++F D HPQ +I+ +LD L + + Q+ F D
Sbjct: 651 KGVIKEPGWSWIKVKDLVFAFVAGDRSHPQGEDIYNMLDLLASRTELADCVQETGFLPYD 710
Query: 680 EE 681
E
Sbjct: 711 LE 712
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/592 (25%), Positives = 276/592 (46%), Gaps = 64/592 (10%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
ALS+ G ++ T+ V+ EC++ + L + + + S D + K
Sbjct: 3 ALSIRALGRRLFTAPAVAS-TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVK 61
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGT 180
G++ A+++FD + + + +SWT+LISGYV + A+ +F +M +E+G L
Sbjct: 62 TGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSL 121
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
A AC + G+ +H Y VK + VG++L +Y+ G + + F+ + +N
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRN 181
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+SWT +I G + L +FS+M ++ + +T C +L G ++H+
Sbjct: 182 VVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHA 241
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+K G+ + V N++ +Y KCG ++ LF+ MS ++V+W +I QM
Sbjct: 242 QAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQM----- 296
Query: 361 DDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
G E A+ F ++ S + P+ YTF+++++ C+ L +E GEQ+HAL L G
Sbjct: 297 --------GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLG 348
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ + V +++ MY KCG++ +S +F EM+ R ++SW+++I G+ +A +L
Sbjct: 349 LAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLS 408
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDM 534
M + G +P + L+AC N ++ Y + ++H LI+M
Sbjct: 409 WMRMEGPKPTEFALASVLSACGNMAILEHG-----KQLHAYVLSIGLEHTAMVLSALINM 463
Query: 535 FVRLGCIEEA----------------------------------FDFIKKMDFEPNEVIW 560
+ + G IEEA F+ I ++ P+ V +
Sbjct: 464 YCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTF 523
Query: 561 SVFIAGCRRHGNMELGFY---AAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++ C G ++LGF+ A + ++ P E Y ++D+ AGR D
Sbjct: 524 IGVLSACSHAGLVDLGFHYFNAMSKKYQISPSK-EHYGCMIDLLCRAGRLSD 574
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 218/441 (49%), Gaps = 19/441 (4%)
Query: 54 VRSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR+ +EAL +E +V+ SY L+ C + +L+ IHA +K G
Sbjct: 193 VRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSS 252
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV L +Y KCG +E +F+ + +VVSWT++I+ VQ Q E A+ F+ M E+
Sbjct: 253 FVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRES 312
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P T ++ C++L I G+Q+HA ++ SV NS+ ++Y+ CG L S+
Sbjct: 313 DVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSS 372
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+ + ++++SW+T+I + G + S M EG +P EF L S+ S CG M
Sbjct: 373 SVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNM 432
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G Q+H+ + +G V ++++ +Y KCG ++EA ++FD + ++V+W AMI
Sbjct: 433 AILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI 492
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-E 408
G+A+ H E + +F K+ G++PD TF +L+ CS ++ G
Sbjct: 493 NGYAE-----------HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFH 541
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
+A++ K ++++ + GR+ A + M R + W++++ H
Sbjct: 542 YFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVH 601
Query: 468 SLSHQALQLFEDMLLAGVRPN 488
+ + E +L + PN
Sbjct: 602 GDVERGRRTAERIL--QLEPN 620
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/683 (33%), Positives = 375/683 (54%), Gaps = 20/683 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL C + L + +H VK G + + L++VY G ++A+ +F +P +
Sbjct: 267 LLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERD 326
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
++SW S+++ YVQ+ + A+ VF +ML VT +AL AC E GK +H
Sbjct: 327 LISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHG 386
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+VV +D+ +GN+L + Y C + A K F R+ + + ++W +IG N E +
Sbjct: 387 FVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNE 446
Query: 260 GLRFFSKMLSEGIQP--NEFTLTSISSVCGTMLSL-RVGAQVHSLGIKLGYASNLRVRNS 316
+ F K++ EG + T+ +I C T L + G +H+ + G+ + V++S
Sbjct: 447 AVAAF-KLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSS 505
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG + + +FD + WNA+IA +A+ + G EAL +
Sbjct: 506 LITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANAR-----------YGFGEEALKLV 554
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ S+G++ D + FS+ L++ + L LE+G+Q+H T+K GF D + A ++MY KC
Sbjct: 555 VRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKC 614
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G ++ A R+ + + R+ +SW ++I+ A H H+A + F DML GV+PN V+FV L
Sbjct: 615 GELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLL 674
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS+ G+V E L Y+ M Y I+P ++H +C+ID+ R G + EA FI +M PN
Sbjct: 675 SACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPN 734
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+++W +A CR + N++LG AA+ LL+L P D +Y + ++F + GRWEDV V+
Sbjct: 735 DLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQ 794
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
K+ + SW++ K + F D HPQ +I L L++ GY S+
Sbjct: 795 MGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYS 854
Query: 677 L--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L TDEE HSE++A+AFGL+N P S + + K+ +C DCH+F K ++ + R
Sbjct: 855 LQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCHSFFKFVSGVLGR 914
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
+I++RD R H F NG+C+C D+
Sbjct: 915 KIVLRDPYRFHHFTNGNCSCSDY 937
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 257/532 (48%), Gaps = 34/532 (6%)
Query: 54 VRSLGFQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAE--IIHAHIVKTGSHQ 107
VR + EA+ + G ++ S ++ SL+ C N+ S+ E H +K G
Sbjct: 34 VRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTAC-NKSSIMAKEGFQFHGFAIKCGLIY 92
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV T V+ Y G + AQK+F+ +P NVVSWTSL+ Y N + I+ + M
Sbjct: 93 DVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMR 152
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G + +++C L I LG Q+ + +K+ E S NSL ++ CG +N
Sbjct: 153 HEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDIN 212
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A FN + E++ +SW ++I A +N + R+F M + N TL+ + S+CG
Sbjct: 213 EACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICG 272
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ L+ G VH L +K G SN+ + N+++ +Y G +A+ +F M +L++WN+
Sbjct: 273 SVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNS 332
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
M+A + Q +G AL +F+++ + + TF+S L C
Sbjct: 333 MLACYVQ------------DGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTN 380
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G+ +H + G ++++G L+ Y KC ++ A +VF M ++W ++I GFAN
Sbjct: 381 GKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFAN 440
Query: 467 HSLSHQALQLFEDML---LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
++ ++A+ F+ M +GV + +T V L +C + +E L + + + +
Sbjct: 441 NAELNEAVAAFKLMREGSTSGV--DYITIVNILGSC----LTHEDLIKYGIPIHAHTVVT 494
Query: 524 VMD---HYM-CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
D H LI M+ + G + + ++ F+ + V W+ IA R+G
Sbjct: 495 GFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSV-WNAIIAANARYG 545
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 242/499 (48%), Gaps = 25/499 (5%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G + AQ VFD + N SW ++SGYV+ A+ F D+ G P+
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 178 LGTALTACSSLESI-RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + +TAC+ + + G Q H + +K D VG S Y++ G +++A K FN +
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++NV+SWT+++ + +NG + + + +M EGI NE + + S CG ++ + +G
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+ +K G + + NS+++++ CG ++EA +F+ M+ + ++WN++I+ +AQ
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQN- 239
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
+ H E+ F + + + T S +L+IC + L+ G+ +H L +K
Sbjct: 240 -------TLHE---ESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVK 289
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G S++ + L+++Y GR + A +F M R LISW SM+ + AL++
Sbjct: 290 YGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKV 349
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNA-----GMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
F +ML N VTF ALAAC + G + +Q E I L
Sbjct: 350 FAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNT------L 403
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
I + + + EA ++M + ++V W+ I G + + AA +L++
Sbjct: 404 ITFYGKCHKMAEAKKVFQRMP-KLDKVTWNALIGGFANNAELNEAV-AAFKLMREGSTSG 461
Query: 592 ESYAMLLDIFVSAGRWEDV 610
Y +++I S ED+
Sbjct: 462 VDYITIVNILGSCLTHEDL 480
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 194/395 (49%), Gaps = 18/395 (4%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL V E ++ ++ S L C++ + +N +I+H +V G + + L+
Sbjct: 346 ALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLIT 405
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-V 176
YGKC M EA+KVF +P+++ V+W +LI G+ N++ A+ F M E + +
Sbjct: 406 FYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYI 465
Query: 177 TLGTALTACSSLES-IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ L +C + E I+ G IHA+ V + D V +SL ++Y+ CG L+S+ F++
Sbjct: 466 TIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQ 525
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ K W +I A G + L+ +M S GI+ ++F ++ SV + L G
Sbjct: 526 LVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEG 585
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H IKLG+ + + N+ M +Y KCG +D+A ++ + + ++WN +I+ A+
Sbjct: 586 QQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISAR- 644
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA-LT 414
H +A F + G+KP+ +F +L+ CS +++G +A +T
Sbjct: 645 ----------HGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMT 694
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
G + ++++ + GR+ A EM
Sbjct: 695 SVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEM 729
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/695 (32%), Positives = 375/695 (53%), Gaps = 35/695 (5%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L+ C IH H + G D FV T L+++Y KC + +A +F +P ++
Sbjct: 17 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 76
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNY--PTNVTLGTALTACSSLESIRLGKQIH 198
V+W ++++GY + A+ L M + P TL L + ++ G +H
Sbjct: 77 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 136
Query: 199 AYVV----------KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
AY + K + D +G +L +Y+ CGSL A + F+ + +N ++W+ +I
Sbjct: 137 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALI 196
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV---CGTMLSLRVGAQVHSLGIKL 305
G Q F ML++G+ + TSI+S C ++ LR+G Q+H+L K
Sbjct: 197 GGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLHALLAKS 254
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G ++L NS++ +Y K GL+D+A LFD M+ + V+++A+++G+ Q
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ----------- 303
Query: 366 HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG EA +F K+ + ++PD T S++ CS L AL+ G H + G S+
Sbjct: 304 -NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ AL++MY KCGRI+ + +VF M +R ++SW +MI G+ H L +A LF +M G
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ VTF+ L+ACS++G+V E +F +M Y + P M+HY+C++D+ R G ++EA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
++FI+ M + +W + CR + N++LG + + +L P+ ++ +L +I+ +A
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GR+++ A V+ + + + ++ SWI I +++F D HPQS EI++ LD ++
Sbjct: 543 GRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGI 602
Query: 665 KCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY+ SF L D +E A + HSEKLAIA+G+L+ I V K+ +C DCH
Sbjct: 603 KKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCH 662
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK I+ + R IIVRD+ R H F NG C+C DF
Sbjct: 663 TVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDF 697
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 212/462 (45%), Gaps = 57/462 (12%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
ML P N T AL ACS+L G+ IH + + + D V +L +Y C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENG---EAVQGLRFFSKMLSEGIQPNEFTLTSI 282
L A F + +++++W ++ +G AV L +M ++PN TL ++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVAL 119
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS-------------IMYLYLKCGLVDE 329
+ +L G VH+ I+ N RNS ++ +Y KCG +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPN---RNSKSKLTDGVLLGTALLDMYAKCGSLLY 176
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG---MKP 386
A+++FD M N VTW+A+I G + T+A +F + + G + P
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRM-----------TQAFLLFKAMLAQGLCFLSP 225
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ +S L C+ L L GEQ+HAL K+G +D+ G +L++MY K G I++A +F
Sbjct: 226 T--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
EM+ + +S++++++G+ + + +A +F+ M V P+ T V + ACS+
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH----L 339
Query: 507 EALGYFEMMQKEYKIKPVM-DHYMC--LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIW 560
AL + I+ + + +C LIDM+ + G I+ + F+ + D V W
Sbjct: 340 AALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI----VSW 395
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLK----PKDCESYAMLL 598
+ IAG HG LG A L++ P D ++ LL
Sbjct: 396 NTMIAGYGIHG---LGKEATALFLEMNNLGFPPDGVTFICLL 434
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 139/281 (49%), Gaps = 2/281 (0%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S S L+ C + L E +HA + K+G H D L+++Y K G +++A +
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + VS+++L+SGYVQN + E A VF M P T+ + + ACS L ++
Sbjct: 283 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 342
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ G+ H V+ +TS+ N+L +Y+ CG ++ + + FN + ++++SW T+I
Sbjct: 343 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 402
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLGYASN 310
G +G + F +M + G P+ T + S C + L + H +G G
Sbjct: 403 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR 462
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ ++ L + G +DEA + M ++ W A++
Sbjct: 463 MEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLG 503
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/715 (33%), Positives = 392/715 (54%), Gaps = 39/715 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK-CGNME 126
EG S++ S L +L E + +KTG +D + T ++NVY + ++
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A K F+++ N +W+++I+ + + AI V+ + + L T L C
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY-ERDPVKSIACRTALITGLAQCG 336
Query: 187 SLESIR-LGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
++ R L +QI VV + N+L + Y G +N A + F+++ +N +SW
Sbjct: 337 RIDDARILFEQIPEPIVVSW---------NALITGYMQNGMVNEAKELFDKMPFRNTISW 387
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +NG + + L ++ G+ P+ +LTSI C +++L G QVHSL +K
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMD----- 357
+G N N+++ +Y KC ++ A+++F M ++V+WN+ +A Q ++D
Sbjct: 448 VGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNT 507
Query: 358 ----LAKDDLS--------AH-NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
L++DD+S AH EA+ F + P+ + +L +C L A
Sbjct: 508 FDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGAS 567
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ G+QIH + +K G S+++V AL++MY KCG + + R+F M R + +W ++ITG+
Sbjct: 568 KIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGY 626
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H L +A+++++ M AGV PN+VTFVG L ACS+AG+V E +F+ M ++Y + P+
Sbjct: 627 AQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPL 686
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+HY C++D+ R G ++ A FI M EP+ VIWS + C+ H N E+G AAE+L
Sbjct: 687 PEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLF 746
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+++P + +Y ML +I+ S G W +VA V+ + +++ + + SW +IKDK++SF D
Sbjct: 747 RIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGD 806
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
H Q EI L+EL K GY F L D +ES+ +YHSEKLA+A+ LL
Sbjct: 807 KQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLA 866
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP PI ++K+ +C DCH FIK ++ +T R+I +RD R H F NG C+C DF
Sbjct: 867 TPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDF 921
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 195/456 (42%), Gaps = 100/456 (21%)
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
G+ G + EA++VFD +PR ++++W S+IS Y N P+ A ++ D + GN T
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNMRT----- 98
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
G L S Y G + A + F+ + E+
Sbjct: 99 ---------------------------------GAILLSGYGRLGRVLEARRVFDGMLER 125
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
N ++W +I +NG+ R F M S + LT
Sbjct: 126 NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLT------------------- 166
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
GY +L+ +VD A+ LF+ M NLV+W MI+G+ ++ +
Sbjct: 167 ------GYCHSLQ-------------MVD-ARNLFEKMPERNLVSWTVMISGYGRIENHG 206
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
K A IF K++ G+ PD F+S L+ L L+ E + L LKTGF
Sbjct: 207 K-----------AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGF 255
Query: 420 LSDVVVGTALVNMY-KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
DVV+GTA++N+Y + ++ A + F M R +W++MI ++ A+ ++E
Sbjct: 256 ERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE 315
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+ + + + LA C G + +A FE + +P++ + LI +++
Sbjct: 316 RDPVKSI-ACRTALITGLAQC---GRIDDARILFEQIP-----EPIVVSWNALITGYMQN 366
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
G + EA + KM F N + W+ IAG ++G E
Sbjct: 367 GMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGRSE 401
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGT---------- 370
+ G V EA+++FD M +++ WN+MI+ H M D A+D A +GG
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 371 --------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS- 421
EA +F + ++ + ++++++ ++ G+ A L S
Sbjct: 106 YGRLGRVLEARRVFDGM----LERNTVAWNAMIS-----CYVQNGDITMARRLFDAMPSR 156
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DV +++ Y ++ A +F +M R L+SWT MI+G+ +A +F M
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR-LGC 540
G+ P+Q F AL+A G + + L ++ + + + +++++ R
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNL-DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLD 599
++ A F + M E NE WS IA G ++ AA + + P K L+
Sbjct: 276 LDTAIKFFESM-IERNEYTWSTMIAALSHGGRID----AAIAVYERDPVKSIACRTALIT 330
Query: 600 IFVSAGRWEDVAVV 613
GR +D ++
Sbjct: 331 GLAQCGRIDDARIL 344
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/707 (31%), Positives = 386/707 (54%), Gaps = 28/707 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EALS+ G T ++V+ LQ + + IH ++K+ D +V L+
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALI 290
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y KCG ME+A +VF+++ + VSW +L+SG VQN A++ F DM +G P V
Sbjct: 291 AMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQV 350
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
++ + A ++ GK++HAY ++ + + +GN+L +Y+ C + AF +
Sbjct: 351 SVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECM 410
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EK+++SWTT+I +N ++ + F K+ +G+ + + S+ C + S
Sbjct: 411 HEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIR 470
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H K A ++ ++N+I+ +Y + G +D A++ F+ + ++V+W +MI
Sbjct: 471 EIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMIT------ 523
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG EAL +F L + ++PD S L+ + L +L++G++IH +
Sbjct: 524 ------CCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLI 577
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF + + ++LV+MY CG +E + ++F + R LI WTSMI H ++A+
Sbjct: 578 RKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIA 637
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF+ M V P+ +TF+ L ACS++G++ E +FE+M+ Y+++P +HY C++D+
Sbjct: 638 LFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLL 697
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R +EEA+ F++ M +P+ IW + C H N ELG AA++LL+ ++ YA
Sbjct: 698 SRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGKYA 757
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ +IF + GRW DV V+ + L + SWI + +K+++F D HPQ+ +I+
Sbjct: 758 LISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYL 817
Query: 656 VLDE---LVEKAKCFGYKQQESF---ELTDEESASVY--HSEKLAIAFGLLNTPIVSPIL 707
L + L+EK GY Q F +++EE + HSE+LA+ +GLL TP + I
Sbjct: 818 KLAQFTKLLEKKG--GYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIR 875
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ K+ +C DCH F KI + ++ R ++VRD+ R H F G C+C DF
Sbjct: 876 ITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDF 922
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/557 (27%), Positives = 282/557 (50%), Gaps = 42/557 (7%)
Query: 43 KLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHA 98
K I +N ++ FQ +L++L+ P S ++ LL CV K+L + +HA
Sbjct: 12 KPISVNTLNKGTLKPAFQ-SLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHA 70
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL 158
++K SH F+ T LV +YGKCG++ +A KVFD + + SW +L+ +V + +
Sbjct: 71 LLLK--SHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLE 128
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
AI ++ DM G T + L AC +L RLG +IH VK + V N+L +
Sbjct: 129 AIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIA 188
Query: 219 LYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+Y CG L A F+ I +++ +SW ++I A G ++ L F +M G+ N
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNT 248
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+T + +++G +H +K + +++ V N+++ +Y KCG +++A ++F+
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFES 308
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M + V+WN +++G L +++L ++AL+ F + +SG KPD + +++
Sbjct: 309 MLCRDYVSWNTLLSG------LVQNELY-----SDALNYFRDMQNSGQKPDQVSVLNLIA 357
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
R L +G+++HA ++ G S++ +G LV+MY KC ++ F M + LIS
Sbjct: 358 ASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLIS 417
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS---NAGMVYEALGY-F 512
WT++I G+A + +A+ LF + + G+ + + L ACS + + E GY F
Sbjct: 418 WTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVF 477
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ + ++ +++++ +G I+ AF+ I+ D V W+ I C
Sbjct: 478 KRDLADIMLQNA------IVNVYGEVGHIDYARRAFESIRSKDI----VSWTSMITCCVH 527
Query: 570 HG----NMELGFYAAEQ 582
+G +EL FY+ +Q
Sbjct: 528 NGLPVEALEL-FYSLKQ 543
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 254/512 (49%), Gaps = 30/512 (5%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ S+L+ C IH VK G + FV L+ +YGKCG++ A
Sbjct: 140 GVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGA 199
Query: 129 QKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+ +FD + + + VSW S+IS +V A+ +F M E G T AL
Sbjct: 200 RVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVE 259
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++LG IH V+K D V N+L ++Y+ CG + A + F + ++ +SW T
Sbjct: 260 DPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNT 319
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ +N L +F M + G +P++ ++ ++ + G +L G +VH+ I+ G
Sbjct: 320 LLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNG 379
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
SN+++ N+++ +Y KC V F+ M +L++W +IAG+AQ +
Sbjct: 380 LDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQ-----------N 428
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA+++F K+ GM D S+L CS L + +IH K L+D+++
Sbjct: 429 EFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRD-LADIMLQ 487
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
A+VN+Y + G I+ A R F + ++ ++SWTSMIT ++ L +AL+LF + ++
Sbjct: 488 NAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQ 547
Query: 487 PNQVTFVGALAACSNAGMV---YEALGYFEMMQKEYKIK-PVMDHYMCLIDMFVRLGCIE 542
P+ + + AL+A +N + E G+ +++K + ++ P+ L+DM+ G +E
Sbjct: 548 PDSIAIISALSATANLSSLKKGKEIHGF--LIRKGFFLEGPIASS---LVDMYACCGTVE 602
Query: 543 EA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ F +K+ D ++W+ I HG
Sbjct: 603 NSRKMFHSVKQRDL----ILWTSMINANGMHG 630
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 251/776 (32%), Positives = 392/776 (50%), Gaps = 99/776 (12%)
Query: 77 YVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
Y + L+ C+ R SL A +H +I+ G ++ L++VY K + A+++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 135 LPRINVVSWTSLISGYV---------------------------------QNSQPELAIH 161
+ + ++ T+++SGY N+ AI+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F M G P N T + L + + + + Q HA +K TSV N+L S+Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 221 STCGS----LNSAIKAFNRIREKNVMSWTTVIGACGENG------EAVQG---------- 260
S C S L+SA K F+ I EK+ SWTT++ +NG E ++G
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 261 ----------------LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
L +M+S GI+ +EFT S+ C T L++G QVH+ ++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA----- 359
S NS++ LY KCG DEA+ +F+ M +LV+WNA+++G+ +
Sbjct: 315 REDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 360 ------KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
K+ LS A NG G E L +FS + G +P Y FS + C+ L A
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
G+Q HA LK GF S + G AL+ MY KCG +E A +VF M +SW ++I
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
H +A+ ++E+ML G+RP+++T + L ACS+AG+V + YF+ M+ Y+I P
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
DHY LID+ R G +A I+ + F+P IW ++GCR HGNMELG AA++L
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
L P+ +Y +L ++ + G+WE+VA V+ L R+ + + SWI ++ +V++F +D
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS------VYHSEKLAIAFGLL 698
HP++ ++ L +L ++ + GY SF L D ES HSEK+A+AFGL+
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM 733
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P + I + K+ C DCHNF + ++ + R+II+RD KR H F NG C+C +F
Sbjct: 734 KLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNF 789
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 197/463 (42%), Gaps = 91/463 (19%)
Query: 43 KLIQLNGNSEPVRSLGF-QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIH 97
KL+ N + GF QEAL ++ + G ++ +Y S+++ C L + +H
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV------ 151
A++++ F LV++Y KCG +EA+ +F+ +P ++VSW +L+SGYV
Sbjct: 310 AYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 152 -------------------------QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+N E + +F M G P + A+ +C+
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L + G+Q HA ++K + S GN+L ++Y+ CG + A + F + + +SW
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I A G++G + + + +ML +GI+P+ TL ++ + C
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS------------------- 529
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
GLVD+ +K FD M V + A +A+++DL L
Sbjct: 530 ----------------HAGLVDQGRKYFDSMETVYRIPPGA--DHYARLIDL----LCRS 567
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
++A S+ L KP + ++L+ C +E G I A G + + G
Sbjct: 568 GKFSDAESVIESLP---FKPTAEIWEALLSGCRVHGNMELG--IIAADKLFGLIPE-HDG 621
Query: 427 TALV--NMYKKCGRIERASRVFVEMSTRTL-----ISWTSMIT 462
T ++ NM+ G+ E +RV M R + SW M T
Sbjct: 622 TYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 42 SKLIQLNGNSEPVRSLGF-QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEII 96
S +I ++G +E GF +E L + + EG + ++ ++ C + N +
Sbjct: 384 SWMIMISGLAEN----GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA ++K G L+ +Y KCG +EEA++VF +P ++ VSW +LI+ Q+
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
A+ V+ +ML+ G P +TL T LTACS + G++
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 243/757 (32%), Positives = 396/757 (52%), Gaps = 78/757 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G K + L+ C S + H I G + FV LV +Y + G+
Sbjct: 140 MLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGS 199
Query: 125 MEEAQKVFDNLPRI---NVVSWTSLISGYVQNSQPELAIHVFLDML-----EAGNYPTNV 176
+E+A VFD + R +V+SW S+++ +V+ S P A+ +F +M +A N +++
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259
Query: 177 -TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN- 234
++ L AC+SL+++ K+IH+Y ++ T D V N+L Y+ CGS+ A+ FN
Sbjct: 260 ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319
Query: 235 ------------------------------RIREKN----VMSWTTVIGACGENGEAVQG 260
+R++N V++W+ VI + G +
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS----------- 309
L F +M+ G +PN T+ S+ S C ++ +L G + H+ +K S
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439
Query: 310 -NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAH 366
+L V N+++ +Y KC A+ +F+ + N+VTW MI G+AQ D
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGD--------- 490
Query: 367 NGGTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLKTGFLSDV 423
+AL +FS++ S + P+ YT S IL C+ L +L G+QIHA +T + S V
Sbjct: 491 --SNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSV 548
Query: 424 -VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V L++MY KCG ++ A VF M R +SWTSM++G+ H +AL +F+ M
Sbjct: 549 YFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK 608
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
AG P+ ++F+ L ACS++GMV + L YF++M+ +Y + HY C+ID+ R G ++
Sbjct: 609 AGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLD 668
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
+A+ I++M EP+ IW ++ CR H N+EL YA +L+ +K ++ SY ++ +I+
Sbjct: 669 KAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYA 728
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
+A RW+DVA ++ L ++ + + SW++ K SF D HP S EI+ +L+ L+
Sbjct: 729 TARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIG 788
Query: 663 KAKCFGYKQQESFEL---TDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
+ K GY + +F L DEE ++ HSEKLA+A+GLL T PI + K+ +C D
Sbjct: 789 RIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLRVCGD 848
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH+ I+ + EIIVRDS R H F NG C+C +
Sbjct: 849 CHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGY 885
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 266/584 (45%), Gaps = 76/584 (13%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-------------- 104
F S G V + + SLL+EC +S++ IH I+ G
Sbjct: 16 FLSVASAECTGRDVSPTHFASLLKEC---RSVNTVRQIHQKIIAYGLLSYPASLLSVSLP 72
Query: 105 ---SHQDFF---VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL 158
SH + T +V Y CG +A V + + V W L+ +++ + +
Sbjct: 73 PLPSHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDR 132
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
AI V ML AG P + TL AL AC L S R G H + E + V N+L +
Sbjct: 133 AIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVA 192
Query: 219 LYSTCGSLNSAIKAFNRIREK---NVMSWTTVIGACGENGEAVQGLRFFSKMLS------ 269
+YS GSL A F+ I K +V+SW +++ A + L FS+M +
Sbjct: 193 MYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKA 252
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+ + ++ +I C ++ +L ++HS I+ G ++ V N+++ Y KCG + +
Sbjct: 253 TNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKD 312
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLS-------------AH 366
A +F+ M ++V+WNAM+ G+ Q ++ K+++ A
Sbjct: 313 AVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ 372
Query: 367 NG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS---- 421
G G EAL F ++ G +P+ T S+L+ C+ L AL QG + HA +LK LS
Sbjct: 373 RGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDND 432
Query: 422 --------DVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSH 471
D+VV AL++MY KC + A +F + R +++WT MI G+A + S+
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 472 QALQLFEDMLLA--GVRPNQVTFVGALAACSNAGMVY--EALGYFEMMQKEYKIKPVMDH 527
AL+LF +M+ V PN T L AC++ + + + + EY+ V
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYE-SSVYFV 551
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
CLIDM+ + G ++ A + M + NEV W+ ++G HG
Sbjct: 552 ANCLIDMYSKCGDVDTARNVFDSMP-KRNEVSWTSMMSGYGMHG 594
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/715 (33%), Positives = 392/715 (54%), Gaps = 39/715 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK-CGNME 126
EG S++ S L +L E + +KTG +D + T ++NVY + ++
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLD 277
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A K F+++ N +W+++I+ + + AI V+ + + L T L C
Sbjct: 278 TAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVY-ERDPVKSIACRTALITGLAQCG 336
Query: 187 SLESIR-LGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
++ R L +QI VV + N+L + Y G +N A + F+++ +N +SW
Sbjct: 337 RIDDARILFEQIPEPIVVSW---------NALITGYMQNGMVNEAKELFDKMPFRNTISW 387
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +NG + + L ++ G+ P+ +LTSI C +++L G QVHSL +K
Sbjct: 388 AGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVK 447
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMD----- 357
+G N N+++ +Y KC ++ A+++F M ++V+WN+ +A Q ++D
Sbjct: 448 VGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNT 507
Query: 358 ----LAKDDLS--------AH-NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
L++DD+S AH EA+ F + P+ + +L +C L A
Sbjct: 508 FDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGAS 567
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ G+QIH + +K G S+++V AL++MY KCG + + R+F M R + +W ++ITG+
Sbjct: 568 KIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLMEERDIFTWNTIITGY 626
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H L +A+++++ M AGV PN+VTFVG L ACS+AG+V E +F+ M ++Y + P+
Sbjct: 627 AQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPL 686
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+HY C++D+ R G ++ A FI M EP+ VIWS + C+ H N E+G AAE+L
Sbjct: 687 PEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLF 746
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+++P + +Y ML +I+ S G W +VA V+ + +++ + + SW +IKDK++SF D
Sbjct: 747 RIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGD 806
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
H Q EI L+EL K GY F L D +ES+ +YHSEKLA+A+ LL
Sbjct: 807 KQHEQIEEIVATLEELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLA 866
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP PI ++K+ +C DCH FIK ++ +T R+I +RD R H F NG C+C DF
Sbjct: 867 TPKGMPIQILKNLRICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDF 921
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 195/456 (42%), Gaps = 100/456 (21%)
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
G+ G + EA++VFD +PR ++++W S+IS Y N P+ A ++ D + GN T
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLY-DAISGGNMRT----- 98
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
G L S Y G + A + F+ + E+
Sbjct: 99 ---------------------------------GAILLSGYGRLGRVLEARRVFDGMLER 125
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
N ++W +I +NG+ R F M S + LT
Sbjct: 126 NTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLT------------------- 166
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
GY +L+ +VD A+ LF+ M NLV+W MI+G+ ++ +
Sbjct: 167 ------GYCHSLQ-------------MVD-ARNLFEKMPERNLVSWTVMISGYGRIENHG 206
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
K A IF K++ G+ PD F+S L+ L L+ E + L LKTGF
Sbjct: 207 K-----------AWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGF 255
Query: 420 LSDVVVGTALVNMY-KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
DVV+GTA++N+Y + ++ A + F M R +W++MI ++ A+ ++E
Sbjct: 256 ERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYE 315
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+ + + + LA C G + +A FE + +P++ + LI +++
Sbjct: 316 RDPVKSI-ACRTALITGLAQC---GRIDDARILFEQIP-----EPIVVSWNALITGYMQN 366
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
G + EA + KM F N + W+ IAG ++G E
Sbjct: 367 GMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGRSE 401
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 38/314 (12%)
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGT---------- 370
+ G V EA+++FD M +++ WN+MI+ H M D A+D A +GG
Sbjct: 46 RLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLSG 105
Query: 371 --------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS- 421
EA +F + ++ + ++++++ ++ G+ A L S
Sbjct: 106 YGRLGRVLEARRVFDGM----LERNTVAWNAMIS-----CYVQNGDITMARRLFDAMPSR 156
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DV +++ Y ++ A +F +M R L+SWT MI+G+ +A +F M
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR-LGC 540
G+ P+Q F AL+A G + + L ++ + + + +++++ R
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNL-DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLD 599
++ A F + M E NE WS IA G ++ AA + + P K L+
Sbjct: 276 LDTAIKFFESM-IERNEYTWSTMIAALSHGGRID----AAIAVYERDPVKSIACRTALIT 330
Query: 600 IFVSAGRWEDVAVV 613
GR +D ++
Sbjct: 331 GLAQCGRIDDARIL 344
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 345/598 (57%), Gaps = 45/598 (7%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC----GSLNSAIKAFNRIREKNVMSWTTVIGA 250
KQ+HA++++ + V L + + GS + F ++ N WT +I
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSY--PLLVFGQVNYPNPFLWTAMI-- 114
Query: 251 CGENGEAVQGL-----RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
G A+QGL F+++M +G+ P FT +++ CG L++ +G QVH+ I +
Sbjct: 115 ---RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILI 171
Query: 306 G-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK---- 360
G +AS+L V NS++ LY+KCG + A+K+FD MS ++V+W +I +A+ D+
Sbjct: 172 GGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGL 231
Query: 361 -DDLS--------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
DDL A NG EAL F K+ GM+ D T + +++ C++L A+
Sbjct: 232 FDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV 291
Query: 405 EQGEQIHALTLKTGF--LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+ I + ++GF +VVVG+AL++MY KCG + A +VF M R + S++SMI
Sbjct: 292 KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMIL 351
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G+A H +H ALQLF DML +RPN+VTF+G L+ACS+AG+V + F M+K + +
Sbjct: 352 GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVA 411
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P DHY C++D+ R GC+EEA D +K M EPN +W + CR HGN ++ AA +
Sbjct: 412 PSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANE 471
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD-KVYSFK 641
L KL+P +Y +L +I+ SAGRWE+V+ ++ + RE+ + SW K+ +++ F
Sbjct: 472 LFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFF 531
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ---ESFELTDEESASVY--HSEKLAIAFG 696
D HP+S+EI + L +L+E+ + GYK ++LTD+E + HSEKLA+A+G
Sbjct: 532 AGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYG 591
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
LL T I ++K+ +C DCHN + + +T REIIVRD+ R H F NG C+C +F
Sbjct: 592 LLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNF 649
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 188/427 (44%), Gaps = 65/427 (15%)
Query: 22 SSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLL 81
S +L+T+ +H + Q GS N P L Q K+ +S+L
Sbjct: 5 SRNLSTVSKLSHLQNLQTRGSP------NFIPFPQLQHQR---------KLLEWRLMSIL 49
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK--VFDNLPRIN 139
+C S + +HAHI++ G Q +V+T L+ + K + VF + N
Sbjct: 50 HDCT---LFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPN 106
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
WT++I GY + + + M G P + T AC + ++ LGKQ+HA
Sbjct: 107 PFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHA 166
Query: 200 YVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA-------- 250
+ D VGNS+ LY CG L A K F+ + E++V+SWT +I A
Sbjct: 167 QTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDME 226
Query: 251 -----------------------CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+NG + L +F KM G++ +E TL + S C
Sbjct: 227 SASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA 286
Query: 288 TMLSLRVGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ +++ + + + G+ + N+ V ++++ +Y KCG DEA K+F+ M N+ ++
Sbjct: 287 QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY 346
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
++MI G+A H AL +F + + ++P+ TF IL+ CS +E
Sbjct: 347 SSMILGYAM-----------HGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVE 395
Query: 406 QGEQIHA 412
QG Q+ A
Sbjct: 396 QGRQLFA 402
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 9/268 (3%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
S +D T L+ Y K G+ME A +FD+LP ++V+WT++++GY QN +P+ A+ F
Sbjct: 205 SERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQ 264
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYST 222
M + G VTL ++AC+ L +++ I + + + VG++L +YS
Sbjct: 265 KMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSK 324
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS + A K F ++E+NV S++++I +G A L+ F ML I+PN+ T I
Sbjct: 325 CGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGI 384
Query: 283 SSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HV 340
S C + G Q+ + K G A + ++ L + G ++EA L M
Sbjct: 385 LSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEP 444
Query: 341 NLVTWNAM-----IAGHAQMMDLAKDDL 363
N W A+ I G+ + +A ++L
Sbjct: 445 NGGVWGALLGACRIHGNPDIAQIAANEL 472
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 50 NSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIH--AHIVKTGSH 106
N P +L FQ+ V E +V + +S C ++ +A I A G
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVIS---ACAQLGAVKHANWIRDIAERSGFGPS 309
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+ V + L+++Y KCG+ +EA KVF+ + NV S++S+I GY + + A+ +F DM
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY----QTEDDTSVGNSLCSLYST 222
L+ P VT L+ACS + G+Q+ A + K+ + D + + L
Sbjct: 370 LKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC---MVDLLGR 426
Query: 223 CGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENG 255
G L A+ + E N W ++GAC +G
Sbjct: 427 AGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/693 (32%), Positives = 374/693 (53%), Gaps = 52/693 (7%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S L+ C +S + +H+ ++ G D FV L+++Y KC + E KVFD +
Sbjct: 177 TFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEM 236
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA--GNYPTNVTLGTALTACSSLESIRL 193
N V+W S+IS Q A+ +FL M E+ G P T T LT C++ +
Sbjct: 237 GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQ 296
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+QIHA++++ + V L +YS CG LN A + FNR+ E+N SW ++I +
Sbjct: 297 GRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ 356
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NGE + LR F +M GI+P+ F+L+S+ S C ++ + G ++H+ ++ +
Sbjct: 357 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 416
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-- 369
+ ++ +Y KCG +D A K++D N WN+++AG+A N G
Sbjct: 417 QVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYA-------------NKGLK 463
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
E+ + F ++ S ++ D+ T +I+ + +V+ TAL
Sbjct: 464 KESFNHFLEMLESDIEYDVLTMVTIVNL-------------------------LVLETAL 498
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V+MY KCG I +A VF M+ + ++SW +MI+G++ H S +AL L+E+M G+ PN+
Sbjct: 499 VDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNE 558
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VTF+ L+ACS+ G+V E L F MQ++Y I+ +HY C++D+ R G +E+A +F++
Sbjct: 559 VTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVE 618
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
KM EP W + CR H +M++G AA++L +L P++ Y ++ +I+ +AGRW++
Sbjct: 619 KMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKE 678
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V ++ + + + + + SWI I ++ F HP++ EI+ L L ++K GY
Sbjct: 679 VEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGY 738
Query: 670 KQQESFELTDEESAS--------VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
SF L + + + HSE+LA++ GL++ P S I V K+ +C DCH
Sbjct: 739 IPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTA 798
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ +T R II RD+ R H F NG C+C D+
Sbjct: 799 TKFISKITGRRIIARDTNRFHHFENGKCSCGDY 831
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 155/563 (27%), Positives = 290/563 (51%), Gaps = 42/563 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---A 128
V Y SL+Q+C++ S + IH ++ G + D ++MT ++ +Y + G +++ A
Sbjct: 69 VNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYA 128
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+K+F+ +P N+ +W ++I Y + A +F ML+ G P N T +AL C +L
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGAL 188
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S GKQ+H+ ++ + DT VGN+L +Y+ C S +K F+ + E+N ++W ++I
Sbjct: 189 RSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSII 248
Query: 249 GACGENGEAVQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
A + G L F +M +GIQP++FT T++ ++C + G Q+H+ I+
Sbjct: 249 SAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 308
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
N+ V ++++Y +CG ++ A+++F+ M+ N +WN+MI G+ Q
Sbjct: 309 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQ------------ 356
Query: 367 NGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG T EAL +F ++ +G+KPD ++ SS+L+ C L ++G ++H ++ + ++
Sbjct: 357 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 416
Query: 426 GTALVNMYKKCGRIERASRVFVEM--STRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
LV+MY KCG ++ A +V+ + R W S++ G+AN L ++ F +ML +
Sbjct: 417 QVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLES 476
Query: 484 GVRPNQVTFV----------GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
+ + +T V + S G + +A F+ M + + + +I
Sbjct: 477 DIEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVS-----WNAMIS 531
Query: 534 MFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLK 587
+ + GC +EA ++ + K PNEV + ++ C G +E G F + ++ ++
Sbjct: 532 GYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 591
Query: 588 PKDCESYAMLLDIFVSAGRWEDV 610
K E Y ++D+ AGR ED
Sbjct: 592 AK-AEHYTCMVDLLGRAGRLEDA 613
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 200/398 (50%), Gaps = 40/398 (10%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + ++ +LL C N+++ + IHAH+++ ++ V T LV++Y +CG +
Sbjct: 272 DGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNY 331
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++F+ + N SW S+I GY QN + + A+ +F M G P +L + L++C S
Sbjct: 332 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 391
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWT 245
L + G+++H ++V+ E++ + L +Y+ CGS++ A K +++ +++N W
Sbjct: 392 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWN 451
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+++ G + F +ML I+ + T+ +I ++
Sbjct: 452 SILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL-------------------- 491
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
L + +++ +Y KCG + +A+ +FD M+ N+V+WNAMI+G+ S
Sbjct: 492 -----LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGY-----------SK 535
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVV 424
H EAL ++ ++ GM P+ TF +IL+ CS +E+G +I ++ +
Sbjct: 536 HGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAE 595
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMI 461
T +V++ + GR+E A +M +S W +++
Sbjct: 596 HYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 633
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 169/360 (46%), Gaps = 26/360 (7%)
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE---AQ 331
N +S+ C S + G +H+ I GY + + I+ LY + G +D+ A+
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
KLF+ M NL WN MI +A++ D EA IF ++ G+ PD +TF
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDY-----------MEAWGIFDRMLKIGVCPDNFTF 178
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+S L +C L + + G+Q+H+ + GF D VG AL++MY KC E +VF EM
Sbjct: 179 ASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGE 238
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLA--GVRPNQVTFVGALAACSNAGMVYEAL 509
R ++W S+I+ A + AL LF M + G++P+Q TF L C+N +
Sbjct: 239 RNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGR 298
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ + K ++ L+ M+ G + A + +M E N W+ I G ++
Sbjct: 299 QIHAHLIRANITKNIIVETE-LVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQ 356
Query: 570 HGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVS-----AGRWEDVAVVKNLTREEKL 622
+G + L + QL +KP DC S + +L VS GR +V+N EE +
Sbjct: 357 NGETQEALRLFKQMQLNGIKP-DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 415
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/695 (33%), Positives = 385/695 (55%), Gaps = 23/695 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEI---IHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
EG ++ + S L+ V SL AEI +H+ IVK G + FV L+N Y CG+
Sbjct: 140 EGHELNPHVFTSFLKLFV---SLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+ VF+ + ++V W ++S YV+N E ++ + M G P N T TAL A
Sbjct: 197 VDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKA 256
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
L + K +H ++K E D VG L LY+ G ++ A K FN + + +V+ W
Sbjct: 257 SIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I +NG + + F +M + PNEFTL+SI + C +G Q+H L +K
Sbjct: 317 SFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+G+ ++ V N+++ +Y KC +D A KLF +S N+V+WN +I G+ + +
Sbjct: 377 VGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGE------- 429
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
G +AL++F + + + TFSS L C+ L ++E G Q+H L +KT V
Sbjct: 430 ----GGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVA 485
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +L++MY KCG I+ A VF EM T + SW ++I+G++ H L QAL++F+ M +
Sbjct: 486 VSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSD 545
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+PN +TF+G L+ CSNAG++ + FE M ++ I+P ++HY C++ +F R G +++A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKA 605
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ I+ + +EP+ +IW ++ N E +AE++LK+ PKD +Y +L +++ A
Sbjct: 606 MNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGA 665
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
+W +VA ++ +E+ + + SWI + V+ F HP I +L+ L KA
Sbjct: 666 KQWANVASIRKSMKEKGVKKEPGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKA 725
Query: 665 KCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIV-SPILVVKSTTMCRDC 718
GY + ++ DEE HSE+LA+A+GL+ P + IL++K+ +C DC
Sbjct: 726 TRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDC 785
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
H+ +K+I+S+ R++++RD R H F G C+C D
Sbjct: 786 HSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCDD 820
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 253/524 (48%), Gaps = 22/524 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P + + +Y ++L+ C+ + +A+ IH I+K GS D F L+N Y K G ++A
Sbjct: 45 PCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL 104
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P N VS+ +L GY + ++ + G+ + L SL+
Sbjct: 105 NLFDEMPERNNVSYVTLTQGYACQD----PVGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ +H+ +VK + + VG +L + YS CGS++SA F I K+++ W ++
Sbjct: 161 KAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVS 220
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
ENG L+ S+M +G PN +T + + + VH +K Y
Sbjct: 221 CYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYEL 280
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
+ RV ++ LY + G + +A K+F+ M ++V W+ MIA Q NG
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ------------NGF 328
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+A+ IF ++ + P+ +T SSIL C+ GEQ+H L +K GF DV V A
Sbjct: 329 CNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNA 388
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y KC +++ A ++F E+S++ ++SW ++I G+ N +AL +F + L V
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVT 448
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+VTF AL AC++ + + + K K V LIDM+ + G I+ A
Sbjct: 449 EVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSN-SLIDMYAKCGDIKVAQTVF 507
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+M+ + W+ I+G HG LG A +K DC+
Sbjct: 508 NEME-TIDVASWNALISGYSTHG---LGRQALRIFDIMKGSDCK 547
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/572 (36%), Positives = 330/572 (57%), Gaps = 19/572 (3%)
Query: 164 LDMLEAGNYPTNVTLGTAL-TACSSLESIRLGKQIHAYVVKYQTEDDTSV-GNSLCSLYS 221
LD+++ G+ + L + L C+ L + G+ +HA++V D+ V N + ++Y+
Sbjct: 75 LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
CG L+ A + F+ + K++++WT +I +N L F +ML G+QPN FTL+S
Sbjct: 135 KCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSS 194
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ G+ L G Q+H+ +K GY S++ V ++++ +Y +CG +D AQ FDGM +
Sbjct: 195 LLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKS 254
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WNA+I+GHA+ + G AL + K+ +P +T+SS+ + C+ +
Sbjct: 255 EVSWNALISGHARKGE-----------GEHALHLLWKMQRKNFQPTHFTYSSVFSACASI 303
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
ALEQG+ +HA +K+G +G L++MY K G I+ A RVF + ++SW +M+
Sbjct: 304 GALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTML 363
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
TG A H L + L FE ML G+ PN+++F+ L ACS++G++ E L YFE+M+K YK+
Sbjct: 364 TGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKV 422
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
+P + HY+ +D+ R+G ++ A FI++M EP +W + CR H NMELG YAAE
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAE 482
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
+ +L P D +L +I+ SAGRW DVA V+ + +E + + SW+ I++ V+ F
Sbjct: 483 RAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFV 542
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFG 696
ND HPQ EI +E+ K K GY S L + E YHSEKLA+AF
Sbjct: 543 ANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFA 602
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
LLNTP SPI + K+ +C DCH IK ++ +
Sbjct: 603 LLNTPTGSPIRIKKNIRVCGDCHAAIKFVSKI 634
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 213/409 (52%), Gaps = 14/409 (3%)
Query: 62 ALSVLTEGPKVQTSS-YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVY 119
AL ++ G V + Y LL+EC + I+HAH+V + + V+ +VN+Y
Sbjct: 74 ALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMY 133
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
KCG +++A+++FD +P ++V+WT+LI+G+ QN++P A+ +F ML G P + TL
Sbjct: 134 AKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLS 193
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L A S + G Q+HA+ +KY + VG++L +Y+ CG +++A AF+ + K
Sbjct: 194 SLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK 253
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +SW +I GE L KM + QP FT +S+ S C ++ +L G VH
Sbjct: 254 SEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVH 313
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK G + N+++ +Y K G +D+A+++FD + ++V+WN M+ G AQ
Sbjct: 314 AHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ----- 368
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
H G E L F ++ G++P+ +F +LT CS L++G L K
Sbjct: 369 ------HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKV 422
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
DV V++ + G ++RA R EM T W +++ H
Sbjct: 423 EPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMH 471
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 132/302 (43%), Gaps = 41/302 (13%)
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD- 422
S +GGT L + + PD +S +L C+RL +EQG +HA + + FL +
Sbjct: 64 SQSDGGT-GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+V+ +VNMY KCG ++ A R+F EM T+ +++WT++I GF+ ++ AL LF ML
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 483 AGVRPNQVTFVGALAA----------------CSNAGM------------VYEALGYFEM 514
G++PN T L A C G +Y G+ +
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDA 242
Query: 515 MQKEYKIKPVMDH--YMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRR 569
Q + P + LI R G E A + KM +F+P +S + C
Sbjct: 243 AQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACAS 302
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYA-MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
G +E G + ++K K LLD++ AG +D V ++L + D
Sbjct: 303 IGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVF-----DRLVKPDVV 357
Query: 629 SW 630
SW
Sbjct: 358 SW 359
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/732 (32%), Positives = 387/732 (52%), Gaps = 70/732 (9%)
Query: 81 LQEC-VNRKSLSNAE----IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
LQ C + +LSN+ +HA VK GS Q L+ +Y K NM AQK+FD +
Sbjct: 291 LQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEI 350
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P+ N +WT LISG+ + E+ ++F +M G P TL + L CS +++LGK
Sbjct: 351 PQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGK 410
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA++++ + D +GNS+ LY C A + F + E +V+SW +IGA G
Sbjct: 411 GVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAG 470
Query: 256 EAVQGLRFFSKM----------LSEGIQPNEFTLTSISSV-----CGTMLS--------- 291
+ + L F ++ + +G+ + ++ + CGT S
Sbjct: 471 DVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALI 530
Query: 292 -------LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF---------D 335
+ +G Q+H + +K G+ S+ +R+S++ +Y KCG +D+A +
Sbjct: 531 LASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRK 590
Query: 336 GMSHVN-------LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPD 387
G + V+ +V+W +M++G+ NG E L F + + D
Sbjct: 591 GNARVSYKEPKAGIVSWGSMVSGYVW------------NGKYEDGLKTFRLMVRELVVVD 638
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ T ++I++ C+ LE G +HA K G D VG++L++MY K G ++ A VF
Sbjct: 639 IRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFR 698
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
+ + ++ WTSMI+G+A H A+ LFE+ML G+ PN+VTF+G L ACS+AG++ E
Sbjct: 699 QSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEE 758
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
YF MM+ Y I P ++H ++D++ R G + + +FI K +W F++ C
Sbjct: 759 GCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSC 818
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H N+E+G + +E LL++ P D +Y +L ++ S RW++ A V++L + + +
Sbjct: 819 RLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPG 878
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASV 685
SWI++KD++++F D HPQ EI+ LD L+ + K GY + D EE V
Sbjct: 879 QSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLVMQDVEEEQGEV 938
Query: 686 ---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
+HSEKLA+ FG++NT +PI ++K+ +C DCHNFIK + L REIIVRD R H
Sbjct: 939 LISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFH 998
Query: 743 KFVNGHCTCRDF 754
F +G C+C D+
Sbjct: 999 HFKHGSCSCGDY 1010
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 228/507 (44%), Gaps = 73/507 (14%)
Query: 17 KSRQPSSSLATLKDKNHTVSY-QRSGSKLIQLNGNSEPVRSLGFQEALS----------V 65
++ P++ L TL K++ +++ Q+ ++ Q N + + GF A S +
Sbjct: 322 QTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREM 381
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+G + S+L+ C +L + +HA +++ G D + ++++Y KC
Sbjct: 382 QAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVF 441
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD-------------------- 165
E A+++F+ + +VVSW +I Y++ E ++ +F
Sbjct: 442 EYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCG 501
Query: 166 -----------MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
M+E G + VT AL SSL + LG+Q+H V+K+ + D + +
Sbjct: 502 YERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRS 561
Query: 215 SLCSLYSTCGSLNSAI------------KAFNRIREK----NVMSWTTVIGACGENGEAV 258
SL +Y CG ++ A K R+ K ++SW +++ NG+
Sbjct: 562 SLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYE 621
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
GL+ F M+ E + + T+T+I S C L G VH+ K+G+ + V +S++
Sbjct: 622 DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLI 681
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K G +D+A +F + N+V W +MI+G+A H G A+ +F +
Sbjct: 682 DMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYA-----------LHGQGMHAIGLFEE 730
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG--TALVNMYKKC 436
+ + G+ P+ TF +L CS +E+G + + +K + + V T++V++Y +
Sbjct: 731 MLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRM-MKDAYCINPGVEHCTSMVDLYGRA 789
Query: 437 GRIERASRVFVEMSTRTLIS-WTSMIT 462
G + + + L S W S ++
Sbjct: 790 GHLTKTKNFIFKNGISHLTSVWKSFLS 816
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 125/295 (42%), Gaps = 30/295 (10%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQL---------NGNSEPVRSLGFQEALSVLTEGPKVQTS 75
L L+ N VSY+ + ++ NG E G + ++ E V
Sbjct: 585 LDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYED----GLKTFRLMVRELVVVDIR 640
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ +++ C N L +HA++ K G D +V + L+++Y K G++++A VF
Sbjct: 641 TVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQS 700
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N+V WTS+ISGY + Q AI +F +ML G P VT L ACS I G
Sbjct: 701 NEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGC 760
Query: 196 QI-----HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS----WTT 246
+ AY + E T S+ LY G L K N I + + W +
Sbjct: 761 RYFRMMKDAYCINPGVEHCT----SMVDLYGRAGHLT---KTKNFIFKNGISHLTSVWKS 813
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ +C + G ++ S+ML + + +S++C + A+V SL
Sbjct: 814 FLSSCRLHKNVEMG-KWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSL 867
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/704 (32%), Positives = 374/704 (53%), Gaps = 54/704 (7%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G ++ + ++G K + S+L+ C L ++IH + +K + FV T LV+
Sbjct: 118 GLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVD 177
Query: 118 VYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y KC + EA+ +F +LP R N V WT++++GY QN + AI F +M G +
Sbjct: 178 MYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHF 237
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T + LTAC+S+ + G+Q+H ++ + V ++L +Y+ CG L SA + +
Sbjct: 238 TFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTM 297
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+V+ W ++I C +G + L F KM + I+ ++FT S+ + +L++G
Sbjct: 298 EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGE 357
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
VHSL IK G+ + V N+++ +Y K G + A +F+ + ++++W +++ G+
Sbjct: 358 SVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYV--- 414
Query: 357 DLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG E AL +F + ++ + D + + + + C+ L +E G Q+HA +
Sbjct: 415 ---------HNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFI 465
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K+ S + +L+ MY KCG +E A RVF M TR +ISWT++I G+A +
Sbjct: 466 KSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN-------- 517
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
G+V YFE M+K Y IKP DHY C+ID+
Sbjct: 518 ---------------------------GLVETGQSYFESMEKVYGIKPASDHYACMIDLL 550
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G I EA + +MD EP+ IW ++ CR HGN+ELG A + L+KL+P + Y
Sbjct: 551 GRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYV 610
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L ++F AGRWED A ++ + +++ +SWI +K +V++F D HP +AEI+
Sbjct: 611 LLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKSQVHTFISEDRSHPLAAEIYS 670
Query: 656 VLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
+DE++ K G+ +F L D +E + YHSEKLA+AFGLL +PI + K
Sbjct: 671 KIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFK 730
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+ +K I+S+ R II+RD H F+ G C+C DF
Sbjct: 731 NLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDF 774
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 267/505 (52%), Gaps = 18/505 (3%)
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
++D + +++ Y GN+ EA+K+F+ P N ++W+SL+SGY +N + F
Sbjct: 65 YRDKYTWNIMISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQ 124
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G P+ TLG+ L ACS+L + GK IH Y +K Q E + V L +YS C
Sbjct: 125 MWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184
Query: 226 LNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L A F + + KN + WT ++ +NGE+++ ++ F +M ++G++ N FT SI +
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILT 244
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C ++ + G QVH I G+ N+ V+++++ +Y KCG + A+ + D M ++V
Sbjct: 245 ACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVC 304
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN+MI G H EAL +F K+++ ++ D +T+ S+L + L
Sbjct: 305 WNSMIVG-----------CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNL 353
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ GE +H+LT+KTGF + V ALV+MY K G + A VF ++ + +ISWTS++TG+
Sbjct: 354 KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGY 413
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
++ +ALQLF DM A V +Q +AC+ ++ K +
Sbjct: 414 VHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKS-SAGSL 472
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAE 581
+ LI M+ + GC+E+A M+ N + W+ I G ++G +E G F + E
Sbjct: 473 LSAENSLITMYAKCGCLEDAIRVFDSMETR-NVISWTAIIVGYAQNGLVETGQSYFESME 531
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGR 606
++ +KP + YA ++D+ AG+
Sbjct: 532 KVYGIKPAS-DHYACMIDLLGRAGK 555
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 46/300 (15%)
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA------- 359
Y+SNL N ++ K G VDEA+KLFD M + + TWN MI+ +A + +L
Sbjct: 34 YSSNLD-SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFN 92
Query: 360 ----KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
K+ ++ NG E L FS++ S G KP YT S+L CS L L
Sbjct: 93 ETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHT 152
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFA 465
G+ IH +K +++ V T LV+MY KC + A +F + R + WT+M+TG+A
Sbjct: 153 GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYA 212
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS-----------NAGMVYEALGYFEM 514
+ S +A+Q F++M G+ N TF L AC+ + +++ G
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFG---- 268
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
P + L+DM+ + G + A + M+ + + V W+ I GC HG ME
Sbjct: 269 --------PNVYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYME 319
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 261/792 (32%), Positives = 398/792 (50%), Gaps = 111/792 (14%)
Query: 71 KVQTSSYVSLLQECV--NRKSLSNAEIIHAHIVKTG------------------------ 104
++ + Y LQ C + S S A +HAH++ +G
Sbjct: 8 RLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYA 67
Query: 105 -------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQ 155
+ D T L+ Y GN+E +++F+ P + V + ++I+GY N
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD 127
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTE-DDTSVG 213
A+ +F M P + T + L+A + + + Q+H VVK +SV
Sbjct: 128 GHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL 187
Query: 214 NSLCSLYS--------TCGSLNSAIKAFNRIREKNVMSWTTVI----------------- 248
N+L S+Y +C ++ SA K F+ + +++ ++WTT+I
Sbjct: 188 NALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247
Query: 249 ------GA-----------CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
GA CG EA+ R KM GIQ ++ T T+I S C + S
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCR---KMRFLGIQFDDITYTTIISACANVGS 304
Query: 292 LRVGAQVHSLGIKLGYASN----LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++G QVH+ +K N L V N+++ LY K VDEA+K+F M N++TWNA
Sbjct: 305 FQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNA 364
Query: 348 MIAGH--AQMMDLAKDDLS-----------------AHNG-GTEALSIFSKLNSSGMKPD 387
+++G+ A M+ AK A NG G E L +F ++ G +P
Sbjct: 365 ILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPC 424
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ F+ LT CS L ALE G Q+HA + G+ S + VG A+++MY KCG +E A VFV
Sbjct: 425 DFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFV 484
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M + L+SW SMI H +A++LF+ ML GV P+++TF+ L ACS+AG+V +
Sbjct: 485 TMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEK 544
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
YF M + Y I P DHY ++D+F R G A I M +P +W +AGC
Sbjct: 545 GRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGC 604
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R HGNM+LG AAEQL KL P++ +Y +L +I+ GRW +VA V+ L R++ + +
Sbjct: 605 RIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPA 664
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EES 682
SWI +++KV+ F +D +HP+ +++ L++L + K GY F L D +E
Sbjct: 665 CSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEH 724
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
A HSEKLA+ FG++ P + + V K+ +C DCHN K ++ + REIIVRD KR H
Sbjct: 725 ALSTHSEKLAVGFGIMKLPPGATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFH 784
Query: 743 KFVNGHCTCRDF 754
F NG C+CRD+
Sbjct: 785 HFKNGDCSCRDY 796
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 379/698 (54%), Gaps = 32/698 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V+LL C ++ +IH VK G + V L+++Y KCG + EA
Sbjct: 311 PDVAT--MVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF-----LDMLEAGNYPTNVTLGTALTA 184
+F + +VVSW S+I Y S+ F + M E VT+ L A
Sbjct: 369 ILFRKIENKSVVSWNSMIGAY---SREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPA 425
Query: 185 C---SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
C S L S+R +H Y +++ + + N+ + Y+ CGSL A F + K+V
Sbjct: 426 CLEESELLSLR---ALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSV 482
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW VIG +NG+ ++ L F+ +M GI P++F++ S+ CG + L+ G ++H
Sbjct: 483 SSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGF 542
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
++ G N V S++ LY C + F+ M N V WNAM++G++Q +
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQ------N 596
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+L EALS+F ++ S G++PD +SIL CS+L AL G+++H LK +
Sbjct: 597 ELP-----NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLME 651
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D V +L++MY K G + + R+F ++ + + SW MITGF H ++A++LFEDM
Sbjct: 652 DNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMK 711
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+ +P++ TF+G L AC +AG+V E L Y MQ YK++P ++HY C+IDM R G +
Sbjct: 712 RSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRL 771
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA +FI +M EP+ IWS ++ + ++E+G AE+LL L+ +SY +L +++
Sbjct: 772 NEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLY 831
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AG+W+ V +V+ ++ L + SWI ++ KVYSF + +P S EI K+ + L
Sbjct: 832 ATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLE 891
Query: 662 EKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
++ GY S EL + E + HSEK+AI FG LNT + + + K+ +CR
Sbjct: 892 KQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICR 951
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHN K I+ REI++RD+KR H F G C+C D+
Sbjct: 952 DCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDY 989
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 287/613 (46%), Gaps = 76/613 (12%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F E +SV P ++ L++ C + + + +H VK G D FV ++ +
Sbjct: 197 FLELISVTEFQP--DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNV 176
YGKCG ++EA ++FD +P N++SW SLI G+ +N A F +LE+G+ P
Sbjct: 255 YGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVA 314
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ T L CS ++ +G IH VK + V N+L +YS CG L+ A F +I
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVC---GTMLS 291
K+V+SW ++IGA G + KM E ++ NE T+ ++ C +LS
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
LR +H ++ + + N+ + Y KCG + A+ +F GM+ ++ +WNA+I G
Sbjct: 435 LRA---LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
HAQ D K AL + ++ G+ PD ++ S+L C RL L+ G++IH
Sbjct: 492 HAQNGDPIK-----------ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L+ G + V +L+++Y C + F M + + W +M++G++ + L +
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIKPVM--D 526
+AL LF ML G+ P+++ L ACS ALG + KE + +K + D
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQ----LSALG----LGKEVHCFALKNSLMED 652
Query: 527 HYMC--LIDMFVRLGCIE----------------------------------EAFDFIKK 550
+++ L+DM+ + G + E F+ +K+
Sbjct: 653 NFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKR 712
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGF-YAAEQ--LLKLKPKDCESYAMLLDIFVSAGRW 607
D +P+ + + C G + G Y A+ L KL+P + E YA ++D+ AGR
Sbjct: 713 SDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEP-ELEHYACVIDMLGRAGRL 771
Query: 608 EDVAVVKNLTREE 620
+ N EE
Sbjct: 772 NEALNFINEMPEE 784
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/436 (30%), Positives = 224/436 (51%), Gaps = 25/436 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ+C K++ + + V + DF + T L+ +Y CG E++ VFD L
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W +L+SGYV+N + AIH FL+++ + P N T + AC+ I LGK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H VK D VGN++ +LY CG L+ A++ F+++ E+N++SW ++I ENG
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 258 VQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
++ R F +L +G+ P+ T+ ++ VC ++ VG +H + +KLG L V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG + EA LF + + ++V+WN+MI +++
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR--------------EGFVFET 398
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVA-LEQGE-----QIHALTLKTGFLSDVVVGTAL 429
F L M+ +L + + TI + L A LE+ E +H +L+ F ++ A
Sbjct: 399 FDLLRKMWMEEELMEVNEV-TILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAF 457
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ Y KCG + A VF M+T+++ SW ++I G A + +AL + +M G+ P+
Sbjct: 458 IAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDD 517
Query: 490 VTFVGALAACSNAGMV 505
+ V L AC G++
Sbjct: 518 FSIVSLLLACGRLGLL 533
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 149/292 (51%), Gaps = 21/292 (7%)
Query: 286 CGTMLSLRVGAQVHS-LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
CG ++ +G ++ L + ++ + + ++ +Y CG E++ +FD + + NL
Sbjct: 117 CGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQ 176
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVA 403
WNA+++G+ +++L EA+ F +L S + +PD +TF ++ C+
Sbjct: 177 WNALVSGYV------RNELY-----DEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCD 225
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+ G+ +H + +K G + D+ VG A++ +Y KCG ++ A +F +M + LISW S+I G
Sbjct: 226 IHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG 285
Query: 464 FANHSLSHQALQLFEDMLLA--GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
F+ + +A + F +L + G+ P+ T V L CS G V + M K +
Sbjct: 286 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV 345
Query: 522 KPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+M +C LIDM+ + GC+ EA +K++ + V W+ I R G
Sbjct: 346 HELM---VCNALIDMYSKCGCLSEAAILFRKIE-NKSVVSWNSMIGAYSREG 393
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 345/598 (57%), Gaps = 45/598 (7%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC----GSLNSAIKAFNRIREKNVMSWTTVIGA 250
KQ+HA++++ + V L + + GS + F ++ N WT +I
Sbjct: 59 KQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSY--PLLVFGQVNYPNPFLWTAMI-- 114
Query: 251 CGENGEAVQGL-----RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
G A+QGL F+++M +G+ P FT +++ CG L++ +G QVH+ I +
Sbjct: 115 ---RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILI 171
Query: 306 G-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK---- 360
G +AS+L V NS++ LY+KCG + A+K+FD MS ++V+W +I +A+ D+
Sbjct: 172 GGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGL 231
Query: 361 -DDLS--------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
DDL A NG EAL F K+ GM+ D T + +++ C++L A+
Sbjct: 232 FDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAV 291
Query: 405 EQGEQIHALTLKTGF--LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+ I + ++GF +VVVG+AL++MY KCG + A +VF M R + S++SMI
Sbjct: 292 KHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMIL 351
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G+A H +H ALQLF DML +RPN+VTF+G L+ACS+AG+V + F M+K + +
Sbjct: 352 GYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVA 411
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P DHY C++D+ R GC+EEA D +K M EPN +W + CR HGN ++ AA +
Sbjct: 412 PSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANE 471
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD-KVYSFK 641
L KL+P +Y +L +I+ SAGRWE+V+ ++ + RE+ + SW K+ +++ F
Sbjct: 472 LFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFF 531
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ---ESFELTDEESASVY--HSEKLAIAFG 696
D HP+S+EI + L +L+E+ + GYK ++LTD+E + HSEKLA+A+G
Sbjct: 532 AGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYG 591
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
LL T I ++K+ +C DCHN + + +T REIIVRD+ R H F NG C+C +F
Sbjct: 592 LLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNF 649
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 188/427 (44%), Gaps = 65/427 (15%)
Query: 22 SSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLL 81
S +L+T+ +H + Q GS N P L Q K+ +S+L
Sbjct: 5 SRNLSTVSKLSHLQNLQTRGSP------NFIPFPQLQHQR---------KLLEWRLMSIL 49
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK--VFDNLPRIN 139
+C S + +HAHI++ G Q +V+T L+ + K + VF + N
Sbjct: 50 HDCT---LFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPN 106
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
WT++I GY + + + M G P + T AC + ++ LGKQ+HA
Sbjct: 107 PFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHA 166
Query: 200 YVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA-------- 250
+ D VGNS+ LY CG L A K F+ + E++V+SWT +I A
Sbjct: 167 QTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDME 226
Query: 251 -----------------------CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+NG + L +F KM G++ +E TL + S C
Sbjct: 227 SASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACA 286
Query: 288 TMLSLRVGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ +++ + + + G+ + N+ V ++++ +Y KCG DEA K+F+ M N+ ++
Sbjct: 287 QLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY 346
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
++MI G+A H AL +F + + ++P+ TF IL+ CS +E
Sbjct: 347 SSMILGYAM-----------HGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVE 395
Query: 406 QGEQIHA 412
QG Q+ A
Sbjct: 396 QGRQLFA 402
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 9/268 (3%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
S +D T L+ Y K G+ME A +FD+LP ++V+WT++++GY QN +P+ A+ F
Sbjct: 205 SERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQ 264
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYST 222
M + G VTL ++AC+ L +++ I + + + VG++L +YS
Sbjct: 265 KMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSK 324
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS + A K F ++E+NV S++++I +G A L+ F ML I+PN+ T I
Sbjct: 325 CGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGI 384
Query: 283 SSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HV 340
S C + G Q+ + K G A + ++ L + G ++EA L M
Sbjct: 385 LSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEP 444
Query: 341 NLVTWNAM-----IAGHAQMMDLAKDDL 363
N W A+ I G+ + +A ++L
Sbjct: 445 NGGVWGALLGACRIHGNPDIAQIAANEL 472
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 50 NSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIH--AHIVKTGSH 106
N P +L FQ+ V E +V + +S C ++ +A I A G
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVIS---ACAQLGAVKHANWIRDIAERSGFGPS 309
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+ V + L+++Y KCG+ +EA KVF+ + NV S++S+I GY + + A+ +F DM
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDM 369
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY----QTEDDTSVGNSLCSLYST 222
L+ P VT L+ACS + G+Q+ A + K+ + D + + L
Sbjct: 370 LKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC---MVDLLGR 426
Query: 223 CGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENG 255
G L A+ + E N W ++GAC +G
Sbjct: 427 AGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 240/698 (34%), Positives = 379/698 (54%), Gaps = 32/698 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V+LL C ++ +IH VK G + V L+++Y KCG + EA
Sbjct: 311 PDVAT--MVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAA 368
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF-----LDMLEAGNYPTNVTLGTALTA 184
+F + +VVSW S+I Y S+ F + M E VT+ L A
Sbjct: 369 ILFRKIENKSVVSWNSMIGAY---SREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPA 425
Query: 185 C---SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
C S L S+R +H Y +++ + + N+ + Y+ CGSL A F + K+V
Sbjct: 426 CLEESELLSLR---ALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSV 482
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW VIG +NG+ ++ L F+ +M GI P++F++ S+ CG + L+ G ++H
Sbjct: 483 SSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGF 542
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
++ G N V S++ LY C + F+ M N V WNAM++G++Q +
Sbjct: 543 VLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQ------N 596
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+L EALS+F ++ S G++PD +SIL CS+L AL G+++H LK +
Sbjct: 597 ELP-----NEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLME 651
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D V +L++MY K G + + R+F ++ + + SW MITGF H ++A++LFEDM
Sbjct: 652 DNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMK 711
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+ +P++ TF+G L AC +AG+V E L Y MQ YK++P ++HY C+IDM R G +
Sbjct: 712 RSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRL 771
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA +FI +M EP+ IWS ++ + ++E+G AE+LL L+ +SY +L +++
Sbjct: 772 NEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLY 831
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AG+W+ V +V+ ++ L + SWI ++ KVYSF + +P S EI K+ + L
Sbjct: 832 ATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLE 891
Query: 662 EKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
++ GY S EL + E + HSEK+AI FG LNT + + + K+ +CR
Sbjct: 892 KQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICR 951
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHN K I+ REI++RD+KR H F G C+C D+
Sbjct: 952 DCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDY 989
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 171/613 (27%), Positives = 287/613 (46%), Gaps = 76/613 (12%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F E +SV P ++ L++ C + + + +H VK G D FV ++ +
Sbjct: 197 FLELISVTEFQP--DNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIAL 254
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNV 176
YGKCG ++EA ++FD +P N++SW SLI G+ +N A F +LE+G+ P
Sbjct: 255 YGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVA 314
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ T L CS ++ +G IH VK + V N+L +YS CG L+ A F +I
Sbjct: 315 TMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKI 374
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVC---GTMLS 291
K+V+SW ++IGA G + KM E ++ NE T+ ++ C +LS
Sbjct: 375 ENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLS 434
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
LR +H ++ + + N+ + Y KCG + A+ +F GM+ ++ +WNA+I G
Sbjct: 435 LRA---LHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGG 491
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
HAQ D K AL + ++ G+ PD ++ S+L C RL L+ G++IH
Sbjct: 492 HAQNGDPIK-----------ALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L+ G + V +L+++Y C + F M + + W +M++G++ + L +
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPN 600
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIKPVM--D 526
+AL LF ML G+ P+++ L ACS ALG + KE + +K + D
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQ----LSALG----LGKEVHCFALKNSLMED 652
Query: 527 HYMC--LIDMFVRLGCIE----------------------------------EAFDFIKK 550
+++ L+DM+ + G + E F+ +K+
Sbjct: 653 NFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKR 712
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGF-YAAEQ--LLKLKPKDCESYAMLLDIFVSAGRW 607
D +P+ + + C G + G Y A+ L KL+P + E YA ++D+ AGR
Sbjct: 713 SDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEP-ELEHYACVIDMLGRAGRL 771
Query: 608 EDVAVVKNLTREE 620
+ N EE
Sbjct: 772 NEALNFINEMPEE 784
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 220/435 (50%), Gaps = 23/435 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ+C K++ + + V + DF + T L+ +Y CG E++ VFD L
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W +L+SGYV+N + AIH FL+++ + P N T + AC+ I LGK +
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H VK D VGN++ +LY CG L+ A++ F+++ E+N++SW ++I ENG
Sbjct: 233 HGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFW 292
Query: 258 VQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
++ R F +L +G+ P+ T+ ++ VC ++ VG +H + +KLG L V N
Sbjct: 293 LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCN 352
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG + EA LF + + ++V+WN+MI +++
Sbjct: 353 ALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSR--------------EGFVFET 398
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-----QIHALTLKTGFLSDVVVGTALV 430
F L M+ +L + + + LE+ E +H +L+ F ++ A +
Sbjct: 399 FDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFI 458
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
Y KCG + A VF M+T+++ SW ++I G A + +AL + +M G+ P+
Sbjct: 459 AAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDF 518
Query: 491 TFVGALAACSNAGMV 505
+ V L AC G++
Sbjct: 519 SIVSLLLACGRLGLL 533
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 149/292 (51%), Gaps = 21/292 (7%)
Query: 286 CGTMLSLRVGAQVHS-LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
CG ++ +G ++ L + ++ + + ++ +Y CG E++ +FD + + NL
Sbjct: 117 CGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQ 176
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVA 403
WNA+++G+ +++L EA+ F +L S + +PD +TF ++ C+
Sbjct: 177 WNALVSGYV------RNELY-----DEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCD 225
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+ G+ +H + +K G + D+ VG A++ +Y KCG ++ A +F +M + LISW S+I G
Sbjct: 226 IHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRG 285
Query: 464 FANHSLSHQALQLFEDMLLA--GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
F+ + +A + F +L + G+ P+ T V L CS G V + M K +
Sbjct: 286 FSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLV 345
Query: 522 KPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+M +C LIDM+ + GC+ EA +K++ + V W+ I R G
Sbjct: 346 HELM---VCNALIDMYSKCGCLSEAAILFRKIE-NKSVVSWNSMIGAYSREG 393
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 233/687 (33%), Positives = 370/687 (53%), Gaps = 24/687 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S Y SL+ +++ L IH +V +G + F+MT LVN G + A+K+FD
Sbjct: 57 SFYASLIDNSTHKRHLDQ---IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDE 113
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+V W ++I Y +N+ + ++ M G +P T L AC+ L L
Sbjct: 114 FCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLS 173
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
IH ++KY D V N L +LY+ CG + A F+ + + ++SWT++I +N
Sbjct: 174 CIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQN 233
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+AV+ LR FS+M + G++P+ L SI + L G +H IK+G +
Sbjct: 234 GKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALL 293
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
S+ Y KCGLV A+ FD M N++ WNAMI+G+A+ NG EA+
Sbjct: 294 ISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAK------------NGHAEEAV 341
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++F + S +KPD T S + +++ +LE + + K+ + SD+ V T+L++MY
Sbjct: 342 NLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMY 401
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A RVF S + ++ W++MI G+ H +A+ L+ M AGV PN VTF+
Sbjct: 402 AKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFI 461
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L AC+++G+V E F M K+++I P +HY C++D+ R G + EA FI K+
Sbjct: 462 GLLTACNHSGLVKEGWELFHCM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPI 520
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EP +W ++ C+ + + LG YAA +L L P + Y L +++ S+ W+ VA V
Sbjct: 521 EPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHV 580
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L RE+ L++ +S I I K+ +F D HP + EIF L L + K G+
Sbjct: 581 RVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLERRLKEVGFVPYT 640
Query: 674 SFELTD------EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
L D EE+ S +HSE++A+A+GL++T + + + K+ C +CH+ IK+I+
Sbjct: 641 ESVLHDLNYEEKEENLS-FHSERIAVAYGLISTAPGTTLRITKNLRACVNCHSAIKLISK 699
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
L REIIVRD+ R H F +G C+C D+
Sbjct: 700 LVEREIIVRDANRFHHFKDGLCSCGDY 726
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 117/230 (50%), Gaps = 4/230 (1%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + ++ G K + VS+L+ + L IH ++K G + ++ L
Sbjct: 238 EALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLT 297
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
Y KCG + A+ FD + NV+ W ++ISGY +N E A+++F M+ P +V
Sbjct: 298 AFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSV 357
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ +A+ A + + S+ L + + YV K D V SL +Y+ CGS+ A + F+R
Sbjct: 358 TVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRN 417
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+K+V+ W+ +I G +G+ + + + M G+ PN+ T + + C
Sbjct: 418 SDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTAC 467
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/617 (34%), Positives = 354/617 (57%), Gaps = 16/617 (2%)
Query: 54 VRSLGFQEALSVLTE---GPKVQTSSYV-SL-LQECVNRKSLSNAEIIHAHIVKTGSHQD 108
V + EALS+ ++ P + ++ SL L+ C S+S E +H + VKT
Sbjct: 43 VNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNS 102
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV + LV++Y K G ++E VF +P NVVSWT++I+G V+ + A+ F DM
Sbjct: 103 VFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWI 162
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
T +AL AC+ ++ G++IH +K + V N+L ++Y+ CG L+
Sbjct: 163 QKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDY 222
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
++ F + +++V+SWTT+I + + G+ ++ F +M + PNEFT ++ S C T
Sbjct: 223 GLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCAT 282
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ + G Q+H+ I+ G +L V NSIM +Y KC +D A +F G+S ++++W+ M
Sbjct: 283 LGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTM 342
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I+G+AQ G EA S + G +P+ + F+S+L++C + LEQG+
Sbjct: 343 ISGYAQ-----------GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGK 391
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
Q+HA L G + +V +AL+NMY KCG I+ AS++F E ++SWT+MI G+A H
Sbjct: 392 QLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHG 451
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
S +A+ LF+ + G+RP+ VTF+ LAACS+AG+V YF + K ++I P DHY
Sbjct: 452 YSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHY 511
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C+ID+ R G + +A I+ M F+ ++V+WS + CR HG+++ G AAE++L+L P
Sbjct: 512 GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDP 571
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
++ L +++ + G+W++ A V+ + + + + + WSWI+ KD+V +F D HP
Sbjct: 572 NCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHP 631
Query: 649 QSAEIFKVLDELVEKAK 665
+ I+ VLD L +A+
Sbjct: 632 EGEYIYDVLDLLASQAE 648
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 146/530 (27%), Positives = 252/530 (47%), Gaps = 57/530 (10%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLG 179
K G++ A+++FD + + + +SWT++ISGYV A+ +F M +E G + L
Sbjct: 13 KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILS 72
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
AL AC S+ G+ +H Y VK + VG++L +Y G ++ F + +
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I G + L +FS M + + + +T +S C +L G ++H
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH 192
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+K G+ + V N++ +Y KCG +D +LF+ M+ ++V+W +I + Q+
Sbjct: 193 CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQI---- 248
Query: 360 KDDLSAHNGGTE--ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
G E A+ F ++ + + P+ +TF+++++ C+ L +E GEQ+HA ++
Sbjct: 249 ---------GQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G + + V +++ MY KC +++ AS VF +S R +ISW++MI+G+A +A
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYL 359
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAG---------------------MVYEALGYFEMMQ 516
M G RPN+ F L+ C N MV AL M
Sbjct: 360 SWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSAL--INMYS 417
Query: 517 KEYKIK---PVMDH--------YMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSV 562
K IK + D + +I+ + G +EA D KK+ P+ V +
Sbjct: 418 KCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIA 477
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCES---YAMLLDIFVSAGRWED 609
+A C G ++LGF+ L K+ + C S Y ++D+ AGR D
Sbjct: 478 VLAACSHAGLVDLGFHYFNSLSKVH-QICPSKDHYGCMIDLLCRAGRLND 526
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 142/296 (47%), Gaps = 45/296 (15%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N ++ +K G ++ A++LFD M + ++W +I+G+ M+ TEALS
Sbjct: 5 NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNT-----------TEALS 53
Query: 375 IFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+FSK+ G+ D + S L C +++ GE +H ++KT F++ V VG+ALV+MY
Sbjct: 54 LFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMY 113
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
K G+++ VF EM R ++SWT++I G + +AL F DM + V + TF
Sbjct: 114 MKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFS 173
Query: 494 GALAACSNAGMV----------------------------YEALGYFEMMQKEYKIKPVM 525
AL AC+++G + Y G + + ++
Sbjct: 174 SALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQR 233
Query: 526 D--HYMCLIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
D + +I V++G E +AF +++ D PNE ++ I+GC G +E G
Sbjct: 234 DVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWG 289
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 261/792 (32%), Positives = 397/792 (50%), Gaps = 111/792 (14%)
Query: 71 KVQTSSYVSLLQECV--NRKSLSNAEIIHAHIVKTG------------------------ 104
++ + Y LQ C + S S A +HAH++ +G
Sbjct: 8 RLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYA 67
Query: 105 -------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQ 155
+ D T L+ Y GN+E +++F+ P + V + ++I+GY N
Sbjct: 68 RQLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD 127
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACS-SLESIRLGKQIHAYVVKYQTE-DDTSVG 213
A+ +F M P + T + L+A + + + Q+H VVK +SV
Sbjct: 128 GHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVL 187
Query: 214 NSLCSLYS--------TCGSLNSAIKAFNRIREKNVMSWTTVI----------------- 248
N+L S+Y C ++ SA K F+ + +++ ++WTT+I
Sbjct: 188 NALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFE 247
Query: 249 ------GA-----------CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
GA CG EA+ R KM GIQ ++ T T+I S C + S
Sbjct: 248 AMVENLGAAWNAMISGYVHCGCFQEALTLCR---KMRFLGIQFDDITYTTIISACANVGS 304
Query: 292 LRVGAQVHSLGIKLGYASN----LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++G Q+H+ +K N L V N+++ LY K VDEA+K+F M N++TWNA
Sbjct: 305 FQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNA 364
Query: 348 MIAGH--AQMMDLAKDDLS-----------------AHNG-GTEALSIFSKLNSSGMKPD 387
+++G+ A M+ AK A NG G E L +F ++ G +P
Sbjct: 365 ILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPC 424
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ F+ LT CS L ALE G Q+HA + G+ S + VG A+++MY KCG +E A VFV
Sbjct: 425 DFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFV 484
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M + L+SW SMI H +A++LF+ ML GV P+++TF+ L ACS+AG+V +
Sbjct: 485 TMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEK 544
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
YF M + Y I P DHY ++D+F R G A I M +P +W +AGC
Sbjct: 545 GRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGC 604
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R HGNM+LG AAEQL KL P++ +Y +L +I+ GRW DVA V+ L R++ + +
Sbjct: 605 RIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPA 664
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EES 682
SWI +++KV+ F +D +HP+ +++ L++L + K GY F L D +E
Sbjct: 665 CSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEH 724
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
A HSEKLA+ FG++ P + + V K+ +C DCHN K ++ + REIIVRD KR H
Sbjct: 725 ALSTHSEKLAVGFGIMKLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFH 784
Query: 743 KFVNGHCTCRDF 754
F NG C+CRD+
Sbjct: 785 HFKNGDCSCRDY 796
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 333/578 (57%), Gaps = 19/578 (3%)
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
A SS S+ IHA V+K D +G+ L S+Y G A + F+ + K+++S
Sbjct: 128 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 187
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W +++ G L F +M +E G QPNE TL S+ S C M +L G +H +
Sbjct: 188 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVV 247
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG + +V NS++ +Y K G +D A +LF+ M +LV+WN+M+ H
Sbjct: 248 VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN--------- 298
Query: 363 LSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
HNG E + +F+ + +G+ PD T ++L C+ Q E IHA + GF +
Sbjct: 299 ---HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA 355
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D+++ TAL+N+Y K GR+ + +F E+ R I+WT+M+ G+A H+ +A++LF+ M+
Sbjct: 356 DIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMV 415
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
GV + VTF L+ACS++G+V E YFE+M + Y+++P +DHY C++D+ R G +
Sbjct: 416 KEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRL 475
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
E+A++ IK M EP+ +W + CR +GN+ELG AEQLL L P D +Y ML +I+
Sbjct: 476 EDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIY 535
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AG W D + V+ L +E +L+ S+I +K++ F D LHP+S EI L+EL+
Sbjct: 536 SAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELI 595
Query: 662 EKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + G + F L D +E V HSEKLAIAFGLL T P+++ K+ +C
Sbjct: 596 RKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICG 655
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ K + L R II+RDSKR H F +G C+CRD+
Sbjct: 656 DCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDY 693
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 202/393 (51%), Gaps = 18/393 (4%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F+EA + VQ S V + C S+S IHA ++K+ ++ D F+ LV++
Sbjct: 109 FREASQFIVVYSIVQ--SLVFAISSCT---SVSYCSAIHARVIKSLNYSDGFIGDRLVSM 163
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVT 177
Y K G E+AQ++FD +P ++VSW SL+SG ++ F M E+G P VT
Sbjct: 164 YFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVT 223
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L + ++AC+ + ++ GK +H VVK V NSL ++Y G L++A + F +
Sbjct: 224 LLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMP 283
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++++SW +++ NG A +G+ F+ M GI P++ T+ ++ C R
Sbjct: 284 VRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAES 343
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H+ + G+ +++ + +++ LY K G ++ ++ +F+ + + + W AM+AG+A
Sbjct: 344 IHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA---- 399
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
H G EA+ +F + G++ D TF+ +L+ CS +E+G++ + +
Sbjct: 400 -------VHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEV 452
Query: 418 GFLSDVVVG-TALVNMYKKCGRIERASRVFVEM 449
+ + + +V++ + GR+E A + M
Sbjct: 453 YRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSM 485
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/731 (30%), Positives = 384/731 (52%), Gaps = 34/731 (4%)
Query: 36 SYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI 95
+Y R+G L + RS G + +Y + L C L +
Sbjct: 87 AYSRAGQPEASLETFARARRSAGV-----------RADRFTYAAALAACSRAGRLREGKA 135
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HA V G FV LV++Y +CG+M +A++VFD + VSW +L+SGYV+
Sbjct: 136 VHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGA 195
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGKQIHAYVVKYQTEDDTSVG 213
+ + VF M +G + LG+ + C+ + + + +H VVK + D +
Sbjct: 196 QDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLA 255
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV------QGLRFFSKM 267
+++ +Y+ G+L+ A+ F + + NV+ + +I + AV + L +S++
Sbjct: 256 SAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEV 315
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
S G++P EFT +S+ C + G Q+H +K + + + ++++ LYL G +
Sbjct: 316 QSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCM 375
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
++ + F + ++VTW AMI+G Q + AL++F +L +G+KPD
Sbjct: 376 EDGFRCFTSVPKQDVVTWTAMISGCVQNELFER-----------ALTLFHELLGAGLKPD 424
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+T SS++ C+ L GEQI K+GF +G + ++MY + G + A R F
Sbjct: 425 PFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQ 484
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
EM + ++SW+++I+ A H + AL+ F +M+ A V PN++TF+G L ACS+ G+V E
Sbjct: 485 EMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDE 544
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L Y+E M++EY + P + H C++D+ R G + +A FI+ F VIW +A C
Sbjct: 545 GLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASC 604
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H +ME G A+++++L+P SY L +I++ AG + ++++ +E + +
Sbjct: 605 RIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPG 664
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EESA 683
SWI ++ V+SF D HP+S I+ L E++ K S + D E+S
Sbjct: 665 LSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKLTATDASSTKSDDTIRNEQSW 724
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+HSEKLA+A GL++ P +PI V+K+ +CRDCH +K+I+ REI++RD+ R H
Sbjct: 725 MNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFHH 784
Query: 744 FVNGHCTCRDF 754
F +G C+C D+
Sbjct: 785 FRDGSCSCADY 795
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 271/583 (46%), Gaps = 72/583 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y+ L+ C + +A +HAHIV+ F+ L+ Y + G A+++ D +P
Sbjct: 20 YLHHLRSC---SAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMP 74
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLE-AGNYPTNVTLGTALTACSSLESIRLGK 195
R N VS+ LI Y + QPE ++ F AG T AL ACS +R GK
Sbjct: 75 RTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGK 134
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA V V NSL S+Y+ CG + A + F+ E++ +SW ++ G
Sbjct: 135 AVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAG 194
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS--LRVGAQVHSLGIKLGYASNLRV 313
LR F+ M GI N F L S+ C + + A VH +K G+ S++ +
Sbjct: 195 AQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFL 254
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT--- 370
++++ +Y K G + EA LF + N+V +NAMIAG L +D+ + GT
Sbjct: 255 ASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAG------LCRDEAAV---GTDVL 305
Query: 371 -EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EALS++S++ S GM+P +TFSS++ C+ +E G+QIH LK F D +G+AL
Sbjct: 306 REALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSAL 365
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y G +E R F + + +++WT+MI+G + L +AL LF ++L AG++P+
Sbjct: 366 IDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDP 425
Query: 490 VTFVGALAACSN-----------------------------------AGMVYEALGYFEM 514
T + AC++ +G V+ A+ F+
Sbjct: 426 FTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQE 485
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHG 571
M+ + + +I + GC +A F +M PNE+ + + C G
Sbjct: 486 MESHDIVS-----WSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGG 540
Query: 572 NMELGFYAAEQLLK---LKP--KDCESYAMLLDIFVSAGRWED 609
++ G E + + L P K C ++D+ AGR D
Sbjct: 541 LVDEGLKYYETMKEEYALSPTIKHC---TCVVDLLGRAGRLAD 580
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/706 (32%), Positives = 380/706 (53%), Gaps = 19/706 (2%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EAL + + G + ++ +L+ C +HAH+++ G ++ V+
Sbjct: 176 LEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNA 235
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCG++ A+KVFD++ ++ +SW ++I+G+ +N + + +FL ML+ P
Sbjct: 236 LMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPN 295
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ + A L I K++H VK D + NSL +Y++ G + A F+
Sbjct: 296 LMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFS 355
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R+ ++ MSWT +I +NG + L ++ M + P++ T+ S + C + SL V
Sbjct: 356 RMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDV 415
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++H L G+ S + V N+++ +Y K +D+A ++F M ++V+W++MIAG
Sbjct: 416 GVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAG--- 472
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ EAL F + + +KP+ TF + L C+ AL G++IHA
Sbjct: 473 --------FCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHV 523
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
L+ G + + AL+++Y KCG+ A F + ++SW MI GF H AL
Sbjct: 524 LRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETAL 583
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
F M+ G P++VTFV L ACS GMV E F M +Y I P + HY C++D+
Sbjct: 584 SFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDL 643
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R+G + EA++FI +M P+ +W + GCR H ++ELG AA+ +L+L+P D +
Sbjct: 644 LSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYH 703
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L D++ AG W+ +A V+ RE+ L SW+ +K V++F +D HPQ EI
Sbjct: 704 VLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREIN 763
Query: 655 KVLDELVEKAKCFGYKQQESFELTD---EESASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
VL+ + E+ K G ES D ++ HSE+LA+AFGL+NT + I V K+
Sbjct: 764 TVLEGIYERMKASGCAPVESHSPEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKN 823
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFGVS 757
C+ CH +K+I+ + R+IIVRDSK++H F +G C+C D G+
Sbjct: 824 QYTCQSCHRILKMISYIVRRDIIVRDSKQVHHFKDGSCSCGDEGLG 869
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 151/516 (29%), Positives = 271/516 (52%), Gaps = 22/516 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+YV+L + C R+++ AH + + ++++ + G A +VF
Sbjct: 95 DAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAK 154
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P +V SW ++ GY + E A+ ++ M+ AG P T L +C + R+G
Sbjct: 155 MPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMG 214
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+++HA+V+++ ++ V N+L ++Y+ CG + +A K F+ + + +SW +I EN
Sbjct: 215 REVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFEN 274
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
GE GL F ML + +QPN T+TS++ G + + ++H L +K G+A+++
Sbjct: 275 GECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFC 334
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
NS++ +Y G++ +A+ +F M + ++W AMI+G+ + NG +AL
Sbjct: 335 NSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEK------------NGFPDKAL 382
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+++ + + + PD T +S L C+ L +L+ G ++H L GF+S VVV AL+ MY
Sbjct: 383 EVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMY 442
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
K RI++A VF M + ++SW+SMI GF + + +AL F M LA V+PN VTF+
Sbjct: 443 AKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFI 501
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKM 551
ALAAC+ G + E+ + + Y+ LID++V+ C + + + +
Sbjct: 502 AALAACAATGALRSGK---EIHAHVLRCGIAYEGYLPNALIDLYVK--CGQTGYAWAQFC 556
Query: 552 DFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLKL 586
+V+ W++ IAG HGN E Q++K+
Sbjct: 557 AHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKI 592
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/609 (36%), Positives = 342/609 (56%), Gaps = 19/609 (3%)
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N + VFL L + + + + + A SS S+ IHA V+K D +
Sbjct: 117 NDSTRTKVAVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFI 176
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-G 271
G+ L S+Y G A + F+ + ++++SW +++ G L F +M +E G
Sbjct: 177 GDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESG 236
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
QPNE TL S+ S C M +L G +H + +KLG + +V NS++ +Y K G +D A
Sbjct: 237 RQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAAS 296
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYT 390
+LF+ M +LV+WN+M+ H HNG E + +F+ + +G+ PD T
Sbjct: 297 QLFEEMPVRSLVSWNSMVVIHN------------HNGYAEKGMDLFNLMKRAGINPDQAT 344
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
++L C+ Q E IHA + GF +D+++ TAL+N+Y K GR+ + +F E+
Sbjct: 345 MVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIK 404
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R I+WT+M+ G+A H+ +A++LF+ M+ GV + VTF L+ACS++G+V E
Sbjct: 405 DRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 464
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YFE+M + Y+++P +DHY C++D+ R G +E+A++ IK M EP+ +W + CR +
Sbjct: 465 YFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVY 524
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
GN+ELG AEQLL L P D +Y ML +I+ +AG W + V+ L +E +L+ S+
Sbjct: 525 GNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSF 584
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV---- 685
I +K++ F D LHP+S EI L+EL+ K G + F L D +E V
Sbjct: 585 IEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMIN 644
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLAIAFGLL T P+++ K+ +C DCH+ K + L R II+RDSKR H F
Sbjct: 645 KHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFA 704
Query: 746 NGHCTCRDF 754
+G C+CRD+
Sbjct: 705 DGLCSCRDY 713
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 191/363 (52%), Gaps = 13/363 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
S+S IHA ++K+ ++ D F+ LV++Y K G E+AQ++FD +P ++VSW SL+S
Sbjct: 154 SVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMS 213
Query: 149 GYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
G ++ F M E+G P VTL + ++AC+ + ++ GK +H VVK
Sbjct: 214 GLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMS 273
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
V NSL ++Y G L++A + F + ++++SW +++ NG A +G+ F+ M
Sbjct: 274 GKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLM 333
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
GI P++ T+ ++ C R +H+ + G+ +++ + +++ LY K G +
Sbjct: 334 KRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRL 393
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+ ++ +F+ + + + W AM+AG+A H G EA+ +F + G++ D
Sbjct: 394 NASEDIFEEIKDRDTIAWTAMLAGYA-----------VHACGREAIKLFDLMVKEGVEVD 442
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVF 446
TF+ +L+ CS +E+G++ + + + + + +V++ + GR+E A +
Sbjct: 443 HVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELI 502
Query: 447 VEM 449
M
Sbjct: 503 KSM 505
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 169/386 (43%), Gaps = 45/386 (11%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + +S++ C +L + +H +VK G V+ L+N+YGK G ++ A
Sbjct: 236 GRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAA 295
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++F+ +P ++VSW S++ + N E + +F M AG P T+ L AC+
Sbjct: 296 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 355
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
R + IHAY+ + D + +L +LY+ G LN++ F I++++ ++WT ++
Sbjct: 356 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAML 415
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ + ++ F M+ EG++ + T T + S C HS
Sbjct: 416 AGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACS-----------HS-------- 456
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
GLV+E +K F+ MS V V + ++ M+DL +G
Sbjct: 457 ----------------GLVEEGKKYFEIMSEVYRV--EPRLDHYSCMVDLL-----GRSG 493
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
E + + S M+P + ++L C +E G+++ A L + SD
Sbjct: 494 RLE--DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV-AEQLLSLDPSDHRNYIM 550
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTL 454
L N+Y G AS+V M R L
Sbjct: 551 LSNIYSAAGLWRXASKVRXLMKERRL 576
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 333/578 (57%), Gaps = 19/578 (3%)
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
A SS S+ IHA V+K D +G+ L S+Y G A + F+ + K+++S
Sbjct: 71 AISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVS 130
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W +++ G L F +M +E G QPNE TL S+ S C M +L G +H +
Sbjct: 131 WNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVV 190
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG + +V NS++ +Y K G +D A +LF+ M +LV+WN+M+ H
Sbjct: 191 VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN--------- 241
Query: 363 LSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
HNG E + +F+ + +G+ PD T ++L C+ Q E IHA + GF +
Sbjct: 242 ---HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNA 298
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D+++ TAL+N+Y K GR+ + +F E+ R I+WT+M+ G+A H+ +A++LF+ M+
Sbjct: 299 DIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMV 358
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
GV + VTF L+ACS++G+V E YFE+M + Y+++P +DHY C++D+ R G +
Sbjct: 359 KEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRL 418
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
E+A++ IK M EP+ +W + CR +GN+ELG AEQLL L P D +Y ML +I+
Sbjct: 419 EDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIY 478
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AG W D + V+ L +E +L+ S+I +K++ F D LHP+S EI L+EL+
Sbjct: 479 SAAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELI 538
Query: 662 EKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + G + F L D +E V HSEKLAIAFGLL T P+++ K+ +C
Sbjct: 539 RKIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICG 598
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ K + L R II+RDSKR H F +G C+CRD+
Sbjct: 599 DCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDY 636
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 199/383 (51%), Gaps = 14/383 (3%)
Query: 70 PKVQTSSYV-SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
P Q S V SL+ + S+S IHA ++K+ ++ D F+ LV++Y K G E+A
Sbjct: 57 PPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDA 116
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSS 187
Q++FD +P ++VSW SL+SG ++ F M E+G P VTL + ++AC+
Sbjct: 117 QRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAD 176
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++ GK +H VVK V NSL ++Y G L++A + F + ++++SW ++
Sbjct: 177 MGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSM 236
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ NG A +G+ F+ M GI P++ T+ ++ C R +H+ + G+
Sbjct: 237 VVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGF 296
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+++ + +++ LY K G ++ ++ +F+ + + + W AM+AG+A H
Sbjct: 297 NADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYA-----------VHA 345
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG- 426
G EA+ +F + G++ D TF+ +L+ CS +E+G++ + + + +
Sbjct: 346 CGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHY 405
Query: 427 TALVNMYKKCGRIERASRVFVEM 449
+ +V++ + GR+E A + M
Sbjct: 406 SCMVDLLGRSGRLEDAYELIKSM 428
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/749 (30%), Positives = 382/749 (51%), Gaps = 89/749 (11%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + + +++T +Y S+LQ C KS ++ + +H+ I D + LV+ Y C
Sbjct: 88 LICMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATC 147
Query: 123 GNMEEAQKVFDNLPRINV------------------------------------------ 140
G+++E ++VFD + + NV
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFEL 207
Query: 141 ---------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+SW S+ISGYV N E + ++ M+ G T+ + L C++ ++
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H+ +K E + N+L +YS CG L+ A++ F ++ E+NV+SWT++I
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+G + ++ +M EG++ + +TSI C SL G VH SNL
Sbjct: 328 TRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N++M +Y KCG ++ A +F M ++++WN MI
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE-------------------- 427
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+KPD T + +L C+ L ALE+G++IH L+ G+ SD V ALV+
Sbjct: 428 ------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG + A +F + ++ L+SWT MI G+ H ++A+ F +M AG+ P++V+
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 535
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G++ + +F +M+ ++ I+P ++HY C++D+ R G + +A++F++ +
Sbjct: 536 FISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETL 595
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
P+ IW + GCR + ++EL AE++ +L+P++ Y +L +I+ A +WE+V
Sbjct: 596 PIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVK 655
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
++ ++ L + SWI IK KV F N+ HP S I +L ++ K K G+
Sbjct: 656 RLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHF 715
Query: 671 QQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ + L + +E A HSEKLA+AFGLL P I V K+ +C DCH K +
Sbjct: 716 PKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFM 775
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ T REI++RDS R H F +G+C+CR F
Sbjct: 776 SKETRREIVLRDSNRFHHFKDGYCSCRGF 804
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 192/360 (53%), Gaps = 36/360 (10%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG +E R LG + + L G V ++ +S+L C N +LS + +H+ +K+ +
Sbjct: 229 NGLTE--RGLGIYKQMMYL--GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
L+++Y KCG+++ A +VF+ + NVVSWTS+I+GY ++ + + AI + M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ G V + + L AC+ S+ GK +H Y+ E + V N+L +Y+ CGS+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+A F+ + K+++SW T+IG ++P+ T+ + C
Sbjct: 405 AANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLPACA 443
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ +L G ++H ++ GY+S+ V N+++ LY+KCG++ A+ LFD + +LV+W
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MIAG+ H G EA++ F+++ +G++PD +F SIL CS LEQG
Sbjct: 504 MIAGYGM-----------HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/697 (32%), Positives = 380/697 (54%), Gaps = 28/697 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSN-AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
Q + VS+L+ C RK LS+ +H +++K+GS + +L+++Y KC A KV
Sbjct: 5 QRQNLVSILRVC-TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD++P NVVSW++L+SG+V N + ++ +F +M G YP T T L AC L ++
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QIH + +K E VGNSL +YS CG +N A K F RI +++++SW +I
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 252 GENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-- 307
G + L F M I+ P+EFTLTS+ C + + G Q+H ++ G+
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+ + S++ LY+KCG + A+K FD + +++W+++I G+AQ +
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF--------- 294
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ +F +L + D + SSI+ + + L QG+Q+ AL +K + V
Sbjct: 295 --VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN 352
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++V+MY KCG ++ A + F EM + +ISWT +ITG+ H L +++++F +ML + P
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
++V ++ L+ACS++GM+ E F + + + IKP ++HY C++D+ R G ++EA
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I M +PN IW ++ CR HG++ELG + LL++ K+ +Y M+ +++ AG W
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYW 532
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK-- 665
+ + L + L + SW+ I+ +V+ F+ + HP + I + L E + +
Sbjct: 533 NEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREE 592
Query: 666 ---CFGYKQQESFELTDE--ESASVYHSEKLAIAFGLLNTPIVSP---ILVVKSTTMCRD 717
+G K E ++ DE E HSEKLAI L + I V K+ +C D
Sbjct: 593 LGYVYGLK-HELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVD 651
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH FIK ++ +T +VRD+ R H F +G C+C D+
Sbjct: 652 CHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 688
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/685 (33%), Positives = 370/685 (54%), Gaps = 21/685 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
SLL+ V+ IHAHI++T + F+ LVN+Y K + AQ V
Sbjct: 11 SLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL 70
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
VV+WTSLISG V N + A+ F +M P + T A + ++ GKQI
Sbjct: 71 RTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQI 130
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H +K D VG S +Y G A F+ + ++N+ +W I ++ +
Sbjct: 131 HGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRS 190
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ + F + L +PN T + + C M+ L +G Q+H+ ++ GY ++ V N +
Sbjct: 191 LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGL 250
Query: 318 MYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+ Y KCG + A+ +F+ + + N+V+W +M+A Q + + A +F
Sbjct: 251 IDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEER-----------ACMVF 299
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+ ++P + SS+L+ C+ L LE G +HAL +K ++ VG+ALV+MY KC
Sbjct: 300 LQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKC 358
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA--GVRPNQVTFVG 494
G IE A +VF E+ R L++W +MI G+A+ AL+LFE+M L G+RP+ VT +
Sbjct: 359 GSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLIS 418
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ CS G V + FE M+ Y I+P +H+ C++D+ R G ++ A++FI+ M +
Sbjct: 419 ILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQ 478
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P +W + CR HG ELG AAE+L +L D ++ +L ++ SAGRWE+ VV+
Sbjct: 479 PTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVR 538
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
++ + + +SWI +K++++ F+ D H +++EI +L +L K GY +
Sbjct: 539 KEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTN 598
Query: 675 ---FELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F+L DEE AS YHSEK+A+AFGL+ P PI + K+ +C DCH+ IK I+ +
Sbjct: 599 LSLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIV 658
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD+ R H+F +G C+C+D+
Sbjct: 659 GREIIVRDNHRFHRFKDGCCSCKDY 683
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 198/443 (44%), Gaps = 29/443 (6%)
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+P N+ LG+ L + S LG+ IHA++++ + T + + N L ++YS LNSA
Sbjct: 4 HPQNL-LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQ 62
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ + V++WT++I C N + L F+ M + +QPN+FT + +
Sbjct: 63 HVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQ 122
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
G Q+H L +K G ++ V S +Y K G +A +FD M NL TWNA I+
Sbjct: 123 IPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYIS 182
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
Q D S +A+ F + +P+ TF + L C +V L G Q+
Sbjct: 183 NAVQ------DRRS-----LDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQL 231
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSL 469
HA ++ G+ DV V L++ Y KCG I A VF + R ++SW SM+ +
Sbjct: 232 HAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHE 291
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY--KIKPVMDH 527
+A +F V P L+AC+ LG E+ + + +K ++
Sbjct: 292 EERACMVFLQA-RKEVEPTDFMISSVLSACAE-------LGGLELGRSVHALAVKACVED 343
Query: 528 YM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+ L+DM+ + G IE A ++ E N V W+ I G G++++ E++
Sbjct: 344 NIFVGSALVDMYGKCGSIENAEQVFSELP-ERNLVTWNAMIGGYAHQGDIDMALRLFEEM 402
Query: 584 LKLKPKDCESYAMLLDIFVSAGR 606
SY L+ I R
Sbjct: 403 TLGSHGIRPSYVTLISILSVCSR 425
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 160/299 (53%), Gaps = 9/299 (3%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ F+E L V E + ++ + L CV+ L+ +HA IV+ G +D V L+
Sbjct: 195 VAFKEFLCVHGEPNSI---TFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLI 251
Query: 117 NVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ YGKCG++ A+ VF+ + R NVVSW S+++ VQN + E A VFL + PT+
Sbjct: 252 DFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVE-PTD 310
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ + L+AC+ L + LG+ +HA VK ED+ VG++L +Y CGS+ +A + F+
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSE 370
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLR 293
+ E+N+++W +IG G+ LR F +M S GI+P+ TL SI SVC + ++
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430
Query: 294 VGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
G Q+ S+ + G ++ L + GLVD A + M+ + W A++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLG 489
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/661 (33%), Positives = 361/661 (54%), Gaps = 31/661 (4%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G+++ A +FD +P ++ +WT LISG+ Q+ P+ AI ++ +L P L +
Sbjct: 25 GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC++ + + K+IH +++ D +GN+L ++ C +N A F+ + K+V+
Sbjct: 85 KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT++ G QG+ F +M GI+ N T++SI C + L G +VH
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKL--GREVHGFI 202
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA----------GH 352
++ N+ V ++++ +Y + +A+ +FD M H ++V+WN M+ G
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262
Query: 353 AQMMDLAKDDLS-------------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTIC 398
+ K+ + NG E AL I K+ SG+KP+ T S L C
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGC 322
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ L +L G++IH + F+ DV + TALV +Y KCG +E + VF M + +++W
Sbjct: 323 TNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWN 382
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
+MI + H ++L LF ML +GV PN VTF+G L+ CS++ + E L F M E
Sbjct: 383 TMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSE 442
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
+ I P DHY C++D+ R G +EEA+DFI+KM EP W + CR + N+ELG
Sbjct: 443 HSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTL 502
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AA QL +++P + +Y +L +I V+A +W + + ++ + R++ L++T SW+++K+KVY
Sbjct: 503 AASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVY 562
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAI 693
SF D + Q I++ LDE+ EK + GY+ F L + E HSE+LA+
Sbjct: 563 SFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAV 622
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
AFG+LN+ + + V K+ +C DCHN IK+I + +IIVRDS R H F +G+CTC D
Sbjct: 623 AFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCND 682
Query: 754 F 754
F
Sbjct: 683 F 683
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 195/401 (48%), Gaps = 49/401 (12%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+S+ + C L A+ IH ++ G ++D + L++++GKC + A+ VFD++
Sbjct: 81 LSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVV 140
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+VVSWTS+ YV I +F +M G ++T+ + L AC+ + I+LG+++
Sbjct: 141 KDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACA--DYIKLGREV 198
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV---------- 247
H ++++ + E + V ++L ++Y++ L A F+ + ++++SW +
Sbjct: 199 HGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEY 258
Query: 248 -------------------------IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
I C +NG+ L KM GI+PN T+ S
Sbjct: 259 ERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSA 318
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
C + SLR G ++H + + ++ + +++ LY KCG ++ ++ +F+ M ++
Sbjct: 319 LPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDV 378
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V WN MI + S H G E+L +F+K+ SG++P+ TF +L+ CS
Sbjct: 379 VAWNTMIMAN-----------SMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQ 427
Query: 403 ALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
++G + ++++ + D + +V++ + GR+E A
Sbjct: 428 LADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEA 468
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 11/180 (6%)
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
L G + A LFD + +L TW +I+GH Q H +A+ I+S L S
Sbjct: 22 LNSGDLKRALYLFDKIPEPDLRTWTILISGHTQ-----------HGFPKKAIDIYSTLLS 70
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
++PD + S+ C+ L ++IH ++ GF D+V+G AL++M+ KC +
Sbjct: 71 RNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNG 130
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A VF +M + ++SWTSM + N + Q + LF +M L G+R N +T L AC++
Sbjct: 131 ARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD 190
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
AL +L + G K + VS L C N +SL + IH ++ + +D + T LV
Sbjct: 296 ALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVL 355
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG++E ++ VF+ +PR +VV+W ++I + + ++ +F ML++G P +VT
Sbjct: 356 LYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVT 415
Query: 178 LGTALTACS 186
L+ CS
Sbjct: 416 FIGVLSGCS 424
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 430 VNMYKKC---GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+ + K C G ++RA +F ++ L +WT +I+G H +A+ ++ +L VR
Sbjct: 15 IKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVR 74
Query: 487 PNQVTFVGALAACSNAG-MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
P++ + AC+ +G +V + + +Q + V+ + LIDMF
Sbjct: 75 PDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGN--ALIDMF 122
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/671 (34%), Positives = 362/671 (53%), Gaps = 27/671 (4%)
Query: 98 AHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
AH +H+ + F L+ Y K + A +FD +P+ ++VS+ +LI+ Y
Sbjct: 62 AHHAFNQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDT 121
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
A+ +F +M E G T +TAC + + L +Q+H+ + SV NSL
Sbjct: 122 LSALSLFGEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSL 179
Query: 217 CSLYSTCGSLNSAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+ YS G L A FN + E ++ +SW ++I A G++ ++ L + M+ G +
Sbjct: 180 LTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEI 239
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKL 333
+ FTL S+ + + L G Q H+ IK G+ N V + ++ +Y KCG + E++K+
Sbjct: 240 DMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKV 299
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F+ + +LV WN MI+G++Q +L+ EAL F ++ +G PD +F
Sbjct: 300 FEEICGSDLVVWNTMISGYSQNKELS----------VEALECFRQMQRAGYWPDDCSFVC 349
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++ CS L + QG+Q HAL +K+ S+ + V ALV MY KCG ++ A ++F M
Sbjct: 350 AISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQH 409
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++ S+I G+A H + ++L LFE ML A + P +T V L+AC++ G V E YF
Sbjct: 410 NTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYF 469
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
MM+ + I+P +HY C+ID+ R G + EA I M F P W+ + CR++GN
Sbjct: 470 NMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGN 529
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
MEL AA Q L+L+P + Y ML ++ +A +WE+ A ++ L R+ + + SWI
Sbjct: 530 MELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIE 589
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY---------KQQESFELTDEESA 683
+ +V+ F D HP+ EI LDE+ K K GY K E+ E ++E
Sbjct: 590 LNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPDVRWAFVKDDETGE-QEKEIM 648
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+HSEKLA+AFGLL T P+LVVK+ +C DCHN IK ++++ R+I VRD+ R H
Sbjct: 649 LAHHSEKLAVAFGLLFTKHGEPLLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHC 708
Query: 744 FVNGHCTCRDF 754
F +G C+C D+
Sbjct: 709 FEDGRCSCGDY 719
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 206/425 (48%), Gaps = 49/425 (11%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L +C + + + GK +H +K T + N LYS C L +A AFN+ E NV
Sbjct: 15 LKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNV 74
Query: 242 -------------------------------MSWTTVIGACGENGEAVQGLRFFSKMLSE 270
+S+ T+I A + G+ + L F +M
Sbjct: 75 FSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREM 134
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G+ + FT + + + C + L Q+HSL G+ S + V+NS++ Y K G+++EA
Sbjct: 135 GLVMDGFTFSGVITACCNHVGLI--RQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEA 192
Query: 331 QKLFDGMSH--VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+ +F+GM + V+WN+MI + Q H G +AL+++ + G + D+
Sbjct: 193 EMVFNGMGEEVRDEVSWNSMIVAYGQ-----------HKRGLKALALYRDMVHRGFEIDM 241
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR-IERASRVFV 447
+T +S+LT S + L G Q HA +KTGF + VG+ L++MY KCG + + +VF
Sbjct: 242 FTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFE 301
Query: 448 EMSTRTLISWTSMITGFA-NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
E+ L+ W +MI+G++ N LS +AL+ F M AG P+ +FV A++ACSN
Sbjct: 302 EICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPS 361
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ + + K + L+ M+ + G +++A ++M + N V + IAG
Sbjct: 362 QGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMP-QHNTVTLNSIIAG 420
Query: 567 CRRHG 571
+HG
Sbjct: 421 YAQHG 425
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/759 (32%), Positives = 390/759 (51%), Gaps = 72/759 (9%)
Query: 57 LGFQEALSVLTE-----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
LGF E + L G + ++ +L+ C S +HA + +G + FV
Sbjct: 123 LGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFV 182
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINV---VSWTSLISGYVQNSQPELAIHVFLDMLE 168
LV++YG+CG E A++VFD + V VSW S+++ Y+Q A+ +F M E
Sbjct: 183 GNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE 242
Query: 169 -AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P V+L L AC+S+ + GKQ+H Y ++ +D VGN++ +Y+ CG +
Sbjct: 243 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMME 302
Query: 228 SAIKAFNRIR-----------------------------------EKNVMSWTTVIGACG 252
A K F R++ E NV++W+ VI
Sbjct: 303 EANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 362
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL------- 305
+ G + L F +ML G +PN TL S+ S C + +L G + H IK
Sbjct: 363 QRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEN 422
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN--LVTWNAMIAGHAQMMDLAKDDL 363
+L V N+++ +Y KC A+ +FD + + +VTW +I G+AQ
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQ--------- 473
Query: 364 SAHNGGTEALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
H EAL +FS++ + + P+ +T S L C+RL AL G QIHA L+ F S
Sbjct: 474 --HGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFES 531
Query: 422 DVV-VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
++ V L++MY K G ++ A VF M R +SWTS++TG+ H +ALQ+F +M
Sbjct: 532 AMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEM 591
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+ P+ VTFV L ACS++GMV + + YF M K++ + P +HY C++D+ R G
Sbjct: 592 QKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGR 651
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++EA + I+ M +P +W ++ CR + N+ELG YAA QLL+L+ + SY +L +I
Sbjct: 652 LDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNI 711
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ +A W+DVA ++ L + + + SW++ + +F D HP S +I+ +L +L
Sbjct: 712 YANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDL 771
Query: 661 VEKAKCFGYKQQESFEL---TDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
+++ K GY F L DEE + HSEKLA+A+G+L T +PI + K+ C
Sbjct: 772 MQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRAC 831
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ I+ + EIIVRDS R H F NG C+CR +
Sbjct: 832 GDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGY 870
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 265/542 (48%), Gaps = 58/542 (10%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PR 137
+L +C KSL++AE+ H ++ G D T ++++Y + +A V L P
Sbjct: 53 TLFHQC---KSLASAELTHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPS 106
Query: 138 INVV-SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ V W LI V E + ++ M G P + T L AC + S R G
Sbjct: 107 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 166
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---MSWTTVIGACGE 253
+HA V E + VGN L S+Y CG+ +A + F+ +RE+ V +SW +++ A +
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 254 NGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G++++ ++ F +M + GI+P+ +L ++ C ++ + G QVH ++ G ++
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLA----------K 360
V N+++ +Y KCG+++EA K+F+ M ++V+WNAM+ G++Q+ D A K
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 361 DDLS-----------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+L+ A G G EAL +F ++ G +P++ T S+L+ C+ L G+
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406
Query: 409 QIHALTLK-------TGFLSDVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTS 459
+ H +K D++V AL++MY KC + A +F + R++++WT
Sbjct: 407 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 466
Query: 460 MITGFANHSLSHQALQLFEDMLLAG--VRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+I G A H +++AL+LF ML V PN T AL AC+ G + F
Sbjct: 467 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-----RFGRQIH 521
Query: 518 EYKIKPVMDHYM-----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
Y ++ + M CLIDM+ + G ++ A M + N V W+ + G HG
Sbjct: 522 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGVSWTSLMTGYGMHGR 580
Query: 573 ME 574
E
Sbjct: 581 GE 582
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 205/464 (44%), Gaps = 85/464 (18%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T C SL S L Q +V+ D T + S+Y T S A+ R+
Sbjct: 53 TLFHQCKSLASAELTHQ--QLLVQGLPHDPTHI----ISMYLTFNSPAKALSVLRRLHPS 106
Query: 240 N--VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ V W +I G L+ + +M G +P+ +T + CG + S R GA
Sbjct: 107 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 166
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV---NLVTWNAMIAGHAQ 354
VH++ G+ N+ V N ++ +Y +CG + A+++FD M +LV+WN+++A + Q
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
D A+ +F ++ G++PD + ++L C+ + A +G+Q+H
Sbjct: 227 GGD-----------SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 275
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT----------- 462
L++G DV VG A+V+MY KCG +E A++VF M + ++SW +M+T
Sbjct: 276 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 335
Query: 463 ------------------------GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
G+A L +AL +F MLL G PN VT V L+
Sbjct: 336 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSG 395
Query: 499 CSNAGMVYEALGYFEMMQKE---YKIKPVM--------DHYM---CLIDMFVRLGCIEEA 544
C++AG + KE + IK ++ D M LIDM+ + + A
Sbjct: 396 CASAGTLLHG--------KETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 447
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
FD I D + V W+V I G +HG Q+L+
Sbjct: 448 RAMFDLIPPKD--RSVVTWTVLIGGNAQHGEANEALELFSQMLQ 489
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 198/457 (43%), Gaps = 78/457 (17%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK-------T 103
R LGF EAL V + G + + VSLL C + +L + + H H +K
Sbjct: 364 RGLGF-EALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDEN 422
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN--VVSWTSLISGYVQNSQPELAIH 161
D V+ L+++Y KC + + A+ +FD +P + VV+WT LI G Q+ + A+
Sbjct: 423 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 482
Query: 162 VFLDMLEAGNY--PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT-SVGNSLCS 218
+F ML+ N+ P T+ AL AC+ L ++R G+QIHAYV++ + E V N L
Sbjct: 483 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 542
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+YS G +++A F+ + ++N +SWT+++ G +G + L+ F +M + P+ T
Sbjct: 543 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVT 602
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ C HS G+VD+ F+GM+
Sbjct: 603 FVVVLYACS-----------HS------------------------GMVDQGINYFNGMN 627
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
V A +A M+DL LS EA+ + + MKP + ++L+ C
Sbjct: 628 KDFGVVPGA--EHYACMVDL----LSRAGRLDEAMELIRGMP---MKPTPAVWVALLSAC 678
Query: 399 SRLVALEQGEQI--HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST----- 451
+E GE L L++G T L N+Y + +R+ M
Sbjct: 679 RVYANVELGEYAANQLLELESGNDGSY---TLLSNIYANARCWKDVARIRYLMKNTGIKK 735
Query: 452 RTLISW-------TSMITGFANHSLSHQALQLFEDML 481
R SW + G +H +S Q L D++
Sbjct: 736 RPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 772
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/690 (32%), Positives = 372/690 (53%), Gaps = 15/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ +L+ C +HAH+++ G ++ V+ L+ +Y KCG++ A
Sbjct: 184 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA 243
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVFD++ ++ +SW ++I+G+ +N + + +FL ML P +T+ + A L
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLL 303
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ K++H VK D + NSL +Y++ G + A F+R+ ++ M+WT +I
Sbjct: 304 SDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMI 363
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG + L ++ M + P++ T+ S + C + SL VG ++H L G+
Sbjct: 364 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFI 423
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+I+ +Y K +D+A ++F M ++V+W++MIAG ++
Sbjct: 424 SYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAG-----------FCFNHR 472
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL F + + +KP+ TF + L C+ AL G++IHA L+ G + + A
Sbjct: 473 NFEALYYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNA 531
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y KCG+ A F + ++SW MI GF H AL F M+ G P+
Sbjct: 532 LIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPD 591
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+VTFV L ACS GMV E F M ++Y I P + HY C++D+ R G + EA++FI
Sbjct: 592 EVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFI 651
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+M P+ +W + GCR H ++ELG AA+ +L L+P D + +L D++ A W+
Sbjct: 652 NEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWD 711
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+A V+ RE+ L SW+ +K V++F +D HPQ EI VL+ + E+ K G
Sbjct: 712 KLARVRKTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASG 771
Query: 669 YKQQESFELTDE---ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
Y ES DE + HSE+LA+AFGL+NT + I V K+ C+ CH +K+I
Sbjct: 772 YAPVESHCPEDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMI 831
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
+++ R+IIVRDSK+LH F +G C+C D G
Sbjct: 832 SNIVRRDIIVRDSKQLHHFKDGSCSCGDEG 861
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/516 (28%), Positives = 271/516 (52%), Gaps = 22/516 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+YV+L + C R+++ AH + + ++++ + G A +VF
Sbjct: 89 DAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAWRVFAK 148
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P +V SW ++ GY ++ + A+ ++ M+ AG P T L +C + R+G
Sbjct: 149 MPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMG 208
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+++HA+V+++ ++ V N+L ++Y+ CG + +A K F+ + + +SW +I EN
Sbjct: 209 REVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFEN 268
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
GE GL F ML + +QPN T+TS++ G + + ++H L +K G+A ++
Sbjct: 269 GECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFC 328
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
NS++ +Y G++ +A+ +F M + +TW AMI+G+ + NG +AL
Sbjct: 329 NSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEK------------NGFPDKAL 376
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+++ + + + PD T +S L C+ L +L+ G ++H L GF+S +VV A++ MY
Sbjct: 377 EVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMY 436
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
K RI++A VF M + ++SW+SMI GF + + +AL F M LA V+PN VTF+
Sbjct: 437 AKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFI 495
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKM 551
ALAAC+ G + E+ + + Y+ LID++V+ C + + + +
Sbjct: 496 AALAACAATGALRSGK---EIHAHVLRCGIEYEGYLPNALIDLYVK--CGQTGYAWAQFC 550
Query: 552 DFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLKL 586
+V+ W++ IAG HG+ + Q++K+
Sbjct: 551 AHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKI 586
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/749 (30%), Positives = 381/749 (50%), Gaps = 89/749 (11%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + + +++T +Y S+LQ C KS ++ + +H+ I D + LV+ Y C
Sbjct: 88 LICMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATC 147
Query: 123 GNMEEAQKVFDNLPRINV------------------------------------------ 140
G+++E ++VFD + + NV
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFEL 207
Query: 141 ---------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+SW S+ISGYV N E + ++ M+ G T+ + L C++ ++
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H+ +K E + N+L +YS CG L+ A++ F ++ E+NV+SWT++I
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+G + ++ +M EG++ + +TSI C SL G VH SNL
Sbjct: 328 TRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N++M +Y KCG ++ A +F M ++++WN MI
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE-------------------- 427
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+KPD T + +L C+ L ALE+G++IH L+ G+ SD V ALV+
Sbjct: 428 ------------LKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG + A +F + ++ L+SWT MI G+ H ++A+ F +M AG+ P++V+
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 535
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G++ + +F +M+ ++ I+P ++HY C++D+ R G + +A++FI+ +
Sbjct: 536 FISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETL 595
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
P+ IW + GCR + ++EL AE++ +L+P++ Y +L +I+ A +WE+V
Sbjct: 596 PIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVK 655
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
++ ++ L + SWI IK KV F N+ HP S I +L ++ K K G+
Sbjct: 656 RLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHF 715
Query: 671 QQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ + L + +E A HSEKLA+AFGLL P I V K+ +C DCH K +
Sbjct: 716 PKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFM 775
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ T REI++RD R H F +G+C+CR F
Sbjct: 776 SKETRREIVLRDPNRFHHFKDGYCSCRGF 804
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 192/360 (53%), Gaps = 36/360 (10%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG +E R LG + + L G V ++ +S+L C N +LS + +H+ +K+ +
Sbjct: 229 NGLTE--RGLGIYKQMMYL--GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
L+++Y KCG+++ A +VF+ + NVVSWTS+I+GY ++ + + AI + M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ G V + + L AC+ S+ GK +H Y+ E + V N+L +Y+ CGS+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+A F+ + K+++SW T+IG ++P+ T+ + C
Sbjct: 405 AANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLPACA 443
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ +L G ++H ++ GY+S+ V N+++ LY+KCG++ A+ LFD + +LV+W
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MIAG+ H G EA++ F+++ +G++PD +F SIL CS LEQG
Sbjct: 504 MIAGYGM-----------HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/713 (34%), Positives = 378/713 (53%), Gaps = 34/713 (4%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVS----LLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R L ++L L V TS+Y+S LL R S + H H + F
Sbjct: 22 RDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDC------NVF 75
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
L++ Y K +E A ++FD +P+ + VS+ +LI+ Y + + A +FL+M EA
Sbjct: 76 SFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAF 135
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
TL +TAC ++ L +Q+HA V + SVGN+L + YS G L A
Sbjct: 136 LDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEAR 193
Query: 231 KAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F+ + E ++ +SW +++ A ++ E + L + +M G+ + FTL S+ + +
Sbjct: 194 RIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNV 253
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG-LVDEAQKLFDGMSHVNLVTWNAM 348
L G Q H+ IK GY N V + ++ LY KCG + + +K+FD +S+ +LV WN M
Sbjct: 254 QDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTM 313
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I+G++ DL+ EAL F +L G +PD + +++ CS + + QG
Sbjct: 314 ISGYSLYEDLSD----------EALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGR 363
Query: 409 QIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
Q+H L LK S+ + V AL+ MY KCG + A +F M +S+ SMI G+A H
Sbjct: 364 QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQH 423
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+ Q+L LF+ ML G P +TF+ LAAC++ G V + YF MM++++ I+P H
Sbjct: 424 GMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGH 483
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
+ C+ID+ R G + EA I+ + F+P WS + CR HGN+EL AA +LL+L
Sbjct: 484 FSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLD 543
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
P + Y ML +I+ GR +D A V+ L R+ + + SWI + +++ F D H
Sbjct: 544 PLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFH 603
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESFELT---------DEESASVYHSEKLAIAFGLL 698
P +I + L+E++ K K GY + L +EE +HSEKLA++FGL+
Sbjct: 604 PMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELRLGHHSEKLAVSFGLM 663
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
+T PILV K+ +C DCHN IK I+ + REI VRDS R H F +G C+C
Sbjct: 664 STREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSC 716
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 4/132 (3%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L+ F L C L G+ +HAL +K+ + + + +Y KC R+ A RVF
Sbjct: 8 LHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
+ S+ ++I+ +A S A QLF++M +P+ V++ +AA + G
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQP 123
Query: 508 ALGYFEMMQKEY 519
A F M++ +
Sbjct: 124 AFQLFLEMREAF 135
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 333/581 (57%), Gaps = 13/581 (2%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ + HA +K S +D FV + L+N+Y K G EA+KVFD +P N VSW ++ISGY
Sbjct: 125 AGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGY 184
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
A+ +F M + L+A + E + GKQIH VK
Sbjct: 185 ASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIV 244
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
SVGN+L ++Y+ CGSL+ A++ F +KN ++W+ +I ++G++ + L+ FS M
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLS 304
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
GI+P+EFT + + C + + G QVH +KLG+ S + V +++ +Y KC + +A
Sbjct: 305 GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLY 389
+K FD + ++V W +MI G+ Q NG E ALS++ ++ G+ P+
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQ------------NGENEDALSLYGRMEMEGILPNEL 412
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T +S+L CS L ALEQG+QIHA T+K GF +V +G+AL MY KCG ++ + VF M
Sbjct: 413 TMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRM 472
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R +ISW +MI+G + + +AL+LFE+M L G +P+ VTFV L+ACS+ G+V
Sbjct: 473 PARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGW 532
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
GYF MM E+ + P ++HY C++D+ R G ++EA +F + + +W + + CR
Sbjct: 533 GYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRN 592
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+ N ELG YA E+L++L ++ +Y +L I+ + GRWEDV V+ + + +S+ S
Sbjct: 593 YRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCS 652
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
WI +K V+ F D +HPQ +I L +L ++ K GY+
Sbjct: 653 WIELKSGVHVFVVKDQMHPQIGDIHVELRQLSKQMKDEGYE 693
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 176/574 (30%), Positives = 275/574 (47%), Gaps = 54/574 (9%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S + +LLQ NR SL + +HA I+K+ S ++ LVN+Y KC + EA+ VF+
Sbjct: 8 SFFTALLQYTHNR-SLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFER 65
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHV---FLDMLEAGNYPTNVTLGTALTACSSLESI 191
+ +VVSW +I+GY Q+ P + HV F M P T TA S+L
Sbjct: 66 IQNKDVVSWNCIINGYSQHG-PSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDA 124
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+ HA +K + D VG+SL ++Y G A K F+ + E+N +SW T+I
Sbjct: 125 AGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGY 184
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
A + L F M E NEF TS+ S + G Q+H + +K G S +
Sbjct: 185 ASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIV 244
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N+++ +Y KCG +D+A + F+ S N +TW+AMI G+AQ D K
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDK----------- 293
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL +FS ++ SG++P +TF ++ CS L A +G+Q+H LK GF S + V TALV+
Sbjct: 294 ALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVD 353
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KC I A + F + ++ WTSMI G+ + + AL L+ M + G+ PN++T
Sbjct: 354 MYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELT 413
Query: 492 FVGALAACSNAGMV----------------------------YEALGYFEMMQKEYKIKP 523
L ACS+ + Y G + ++ P
Sbjct: 414 MASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMP 473
Query: 524 VMD--HYMCLIDMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELGFY 578
D + +I + GC +EA + ++M E P+ V + ++ C G +E G+
Sbjct: 474 ARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWG 533
Query: 579 AAEQLLK---LKPKDCESYAMLLDIFVSAGRWED 609
+ + P+ E YA ++DI AG+ ++
Sbjct: 534 YFRMMFDEFGMDPR-VEHYACMVDILSRAGKLKE 566
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 227/428 (53%), Gaps = 30/428 (7%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P+N + TAL + S++ GK +HA ++K + + NSL +LY+ C L A
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQG--LRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F RI+ K+V+SW +I ++G + + F +M +E PN T + + T++
Sbjct: 63 FERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLV 122
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
G H++ IK+ ++ V +S+M +Y K GL EA+K+FD M N V+W MI+
Sbjct: 123 DAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMIS 182
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G+ A L+A EAL +F + + + F+S+L+ + + G+QI
Sbjct: 183 GY------ASQKLAA-----EALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQI 231
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H + +K G LS V VG ALV MY KCG ++ A + F S + I+W++MITG+A S
Sbjct: 232 HCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDS 291
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK---EYKIKPVMDH 527
+AL+LF M L+G+RP++ TFVG + ACS+ G +E + + K E +I VM
Sbjct: 292 DKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIY-VM-- 348
Query: 528 YMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQ 582
L+DM+ + I +A FD+++ EP+ V+W+ I G ++G E L Y +
Sbjct: 349 -TALVDMYAKCSSIVDARKGFDYLQ----EPDIVLWTSMIGGYVQNGENEDALSLYGRME 403
Query: 583 LLKLKPKD 590
+ + P +
Sbjct: 404 MEGILPNE 411
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 48 NGNSEPVRSL-GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
NG +E SL G E EG + S+L+ C + +L + IHA VK G
Sbjct: 389 NGENEDALSLYGRME-----MEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFG 443
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+ + + L +Y KCG +++ VF +P +V+SW ++ISG QN + A+ +F +M
Sbjct: 444 LEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEM 503
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCG 224
G P VT L+ACS + + G + + D V + C + S G
Sbjct: 504 QLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFD-EFGMDPRVEHYACMVDILSRAG 562
Query: 225 SLNSAIKAFNRIREKNVMS-WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE--FTLTS 281
L AI+ + M W ++GAC G K++ G Q + L+S
Sbjct: 563 KLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSS 622
Query: 282 ISSVCG 287
I S G
Sbjct: 623 IYSALG 628
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/685 (32%), Positives = 365/685 (53%), Gaps = 22/685 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSH---QDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
LL+ C N L E IH H++ T +D + + L+N+Y KCG A+KVFD +P
Sbjct: 37 LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96
Query: 137 RINVVSWTSLISGYVQNSQPELAI-HVFLDMLEAG-NYPTNVTLGTALTACSSLESIRLG 194
NVVSW +++ GY QNS + + +F M+ + + P +CSS I G
Sbjct: 97 ERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEG 155
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ H +K V N+L +YS C AI+ + + ++ +++ + E
Sbjct: 156 KQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G +G +M E + + T S +C + L + Q+HS ++LG+ S +
Sbjct: 216 GAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEAS 275
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+I+ +Y KCG V AQ++FD N+V + +MD D S EAL+
Sbjct: 276 GAIINMYGKCGKVLYAQRVFDNTHAQNIVL-------NTTIMDAYFQDKSFE----EALN 324
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+FSK+++ + P+ YTF+ L + L L+ G+ +H L LK+G+ + V+VG ALVNMY
Sbjct: 325 LFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
K G IE A + F M+ R +++W +MI GF++H L + L+ F+ M++AG PN++TF+G
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIG 444
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+ G V + L YF + K++ ++P + HY C++ + + G ++A DF++ E
Sbjct: 445 VLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ V W + C N LG AE + P D Y +L +I + WE VA V+
Sbjct: 505 WDVVAWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVR 564
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+L + + + SWI I+++ + F + HP+ I+ + E++ K + GY +
Sbjct: 565 SLMNKRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVA 624
Query: 675 --FELTDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F DEE YHSEKLA+A+GL+ TP SP+ V K+ +C DCH+ IK+I+ ++
Sbjct: 625 GVFHDVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R I++RDS R H F +G C+C D+
Sbjct: 685 KRYIVIRDSNRFHHFRDGQCSCCDY 709
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 199/415 (47%), Gaps = 25/415 (6%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVV---KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L L C++ +R G+ IH +++ + D NSL +LY CG A K F+
Sbjct: 34 LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFD 93
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLR 293
+ E+NV+SW ++ +G + L+ F M+ S+ +PNEF T + C + +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIE 153
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q H +K G S+ VRN+++Y+Y C EA ++ D + + +L +++ ++G+
Sbjct: 154 EGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ A G E L +K + D T+ S L +CS L L QIH+
Sbjct: 214 E--------CGAFKEGAEVLRRMAK---EDLVLDNITYLSCLRLCSNLRDLNLARQIHSR 262
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
++ GF S+V A++NMY KCG++ A RVF + ++ T+++ + +A
Sbjct: 263 MVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEA 322
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA-LGYFEMMQKEYKIKPVMDHYM--- 529
L LF M V PN+ TF +L + + ++ L + +++ Y+ +H M
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYR-----NHVMVGN 377
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
L++M+ + G IE+A M F + V W+ I G HG G A ++++
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMICGFSHHGLGREGLEAFDRMM 431
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 145/298 (48%), Gaps = 6/298 (2%)
Query: 58 GFQEALSVLTEGPK----VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+E VL K + +Y+S L+ C N + L+ A IH+ +V+ G + +
Sbjct: 217 AFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNSEVEASG 276
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
++N+YGKCG + AQ+VFDN N+V T+++ Y Q+ E A+++F M P
Sbjct: 277 AIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T +L + + L ++ G +H V+K + VGN+L ++Y+ GS+ A KAF
Sbjct: 337 NEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + +++++W T+I +G +GL F +M+ G PN T + C + +
Sbjct: 397 SGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACSHVGFVE 456
Query: 294 VGA-QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
G + L K +L+ I+ L K G+ +A+ ++V W A++
Sbjct: 457 QGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRALL 514
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 249/759 (32%), Positives = 389/759 (51%), Gaps = 72/759 (9%)
Query: 57 LGFQEALSVLTE-----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
LGF E + L G + ++ +L+ C S +HA + +G + FV
Sbjct: 104 LGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFV 163
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINV---VSWTSLISGYVQNSQPELAIHVFLDMLE 168
LV++YG+CG E A++VFD + V VSW S+++ Y+Q A+ +F M E
Sbjct: 164 GNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTE 223
Query: 169 -AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P V+L L AC+S+ + GKQ+H Y ++ +D VGN++ +Y+ CG +
Sbjct: 224 DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMME 283
Query: 228 SAIKAFNRIR-----------------------------------EKNVMSWTTVIGACG 252
A K F R++ E NV++W+ VI
Sbjct: 284 EANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYA 343
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL------- 305
+ G + L F +M G +PN TL S+ S C +L G + H IK
Sbjct: 344 QRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEN 403
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN--LVTWNAMIAGHAQMMDLAKDDL 363
+L V N+++ +Y KC A+ +FD + + +VTW +I G+AQ
Sbjct: 404 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQ--------- 454
Query: 364 SAHNGGTEALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
H EAL +FS++ + + P+ +T S L C+RL AL G QIHA L+ F S
Sbjct: 455 --HGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFES 512
Query: 422 DVV-VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
++ V L++MY K G ++ A VF M R +SWTS++TG+ H +ALQ+F +M
Sbjct: 513 AMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEM 572
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
G+ P+ VTFV L ACS++GMV + + YF M K++ + P +HY C++D+ R G
Sbjct: 573 QKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGR 632
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++EA + I+ M +P +W ++ CR + N+ELG YAA QLL+L+ + SY +L +I
Sbjct: 633 LDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNI 692
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ +A W+DVA ++ L + + + SW++ + +F D HP S +I+ +L +L
Sbjct: 693 YANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDL 752
Query: 661 VEKAKCFGYKQQESFEL---TDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
+++ K GY F L DEE + HSEKLA+A+G+L T +PI + K+ C
Sbjct: 753 MQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRAC 812
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ I+ + EIIVRDS R H F NG C+CR +
Sbjct: 813 GDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGY 851
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/542 (28%), Positives = 266/542 (49%), Gaps = 58/542 (10%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PR 137
+L +C KSL++AE+IH ++ G D T ++++Y + +A V L P
Sbjct: 34 TLFHQC---KSLASAELIHQQLLVQGLPHD---PTHIISMYLTFNSPAKALSVLRRLHPS 87
Query: 138 INVV-SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ V W LI V E + ++ M G P + T L AC + S R G
Sbjct: 88 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 147
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---MSWTTVIGACGE 253
+HA V E + VGN L S+Y CG+ +A + F+ +RE+ V +SW +++ A +
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 254 NGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G++++ ++ F +M + GI+P+ +L ++ C ++ + G QVH ++ G ++
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLA----------K 360
V N+++ +Y KCG+++EA K+F+ M ++V+WNAM+ G++Q+ D A K
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 361 DDLS-----------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+L+ A G G EAL +F ++ G +P++ T S+L+ C+ L G+
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387
Query: 409 QIHALTLK-------TGFLSDVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTS 459
+ H +K D++V AL++MY KC + A +F + R++++WT
Sbjct: 388 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 447
Query: 460 MITGFANHSLSHQALQLFEDMLLAG--VRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+I G A H +++AL+LF ML V PN T AL AC+ G + F
Sbjct: 448 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL-----RFGRQIH 502
Query: 518 EYKIKPVMDHYM-----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
Y ++ + M CLIDM+ + G ++ A M + N V W+ + G HG
Sbjct: 503 AYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMH-QRNGVSWTSLMTGYGMHGR 561
Query: 573 ME 574
E
Sbjct: 562 GE 563
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 205/456 (44%), Gaps = 69/456 (15%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T C SL S L Q +V+ D T + S+Y T S A+ R+
Sbjct: 34 TLFHQCKSLASAELIHQ--QLLVQGLPHDPTHI----ISMYLTFNSPAKALSVLRRLHPS 87
Query: 240 N--VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ V W +I G L+ + +M G +P+ +T + CG + S R GA
Sbjct: 88 SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGAS 147
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV---NLVTWNAMIAGHAQ 354
VH++ G+ N+ V N ++ +Y +CG + A+++FD M +LV+WN+++A + Q
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
D A+ +F ++ G++PD + ++L C+ + A +G+Q+H
Sbjct: 208 GGD-----------SIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGY 256
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
L++G DV VG A+V+MY KCG +E A++VF M + ++SW +M+TG++ A
Sbjct: 257 ALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDA 316
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ----------------- 516
L LFE + + N VT+ +A + G+ +EAL F M+
Sbjct: 317 LGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSG 376
Query: 517 ----------KE---YKIKPVM--------DHYM---CLIDMFVRLGCIEEA---FDFIK 549
KE + IK ++ D M LIDM+ + + A FD I
Sbjct: 377 CALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIP 436
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
D + V W+V I G +HG Q+L+
Sbjct: 437 PKD--RSVVTWTVLIGGNAQHGEANEALELFSQMLQ 470
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 198/457 (43%), Gaps = 78/457 (17%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK-------T 103
R LGF EAL V + G + + VSLL C +L + + H H +K
Sbjct: 345 RGLGF-EALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDEN 403
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN--VVSWTSLISGYVQNSQPELAIH 161
D V+ L+++Y KC + + A+ +FD +P + VV+WT LI G Q+ + A+
Sbjct: 404 DPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALE 463
Query: 162 VFLDMLEAGNY--PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT-SVGNSLCS 218
+F ML+ N+ P T+ AL AC+ L ++R G+QIHAYV++ + E V N L
Sbjct: 464 LFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLID 523
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+YS G +++A F+ + ++N +SWT+++ G +G + L+ F +M G+ P+ T
Sbjct: 524 MYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVT 583
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ C HS G+VD+ F+GM+
Sbjct: 584 FVVVLYACS-----------HS------------------------GMVDQGINYFNGMN 608
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
V A +A M+DL LS EA+ + + MKP + ++L+ C
Sbjct: 609 KDFGVVPGA--EHYACMVDL----LSRAGRLDEAMELIRGMP---MKPTPAVWVALLSAC 659
Query: 399 SRLVALEQGEQI--HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST----- 451
+E GE L L++G T L N+Y + +R+ M
Sbjct: 660 RVYANVELGEYAANQLLELESGNDGSY---TLLSNIYANARCWKDVARIRYLMKNTGIKK 716
Query: 452 RTLISW-------TSMITGFANHSLSHQALQLFEDML 481
R SW + G +H +S Q L D++
Sbjct: 717 RPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLM 753
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 349/654 (53%), Gaps = 58/654 (8%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
+S + LL CV +S +A +H +++T ++ F+ L++VYGKCG ++ A+KVFD
Sbjct: 24 SSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFD 83
Query: 134 NLPRINVVS-------------------------------WTSLISGYVQNSQPELAIHV 162
+ NV S W S+I+G+ Q+ + E A+
Sbjct: 84 RMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDW 143
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F+ M + + G+ L+ACS L+ ++LG QIH + K + D +G+ L YS
Sbjct: 144 FVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSK 203
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CG + A + F+ + EKNV+SW +I +NG A++ L F +M G +P+E TL S+
Sbjct: 204 CGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
S C T+ + + G Q+H+ +K + ++L + N+++ +Y KCG V+EA+ +FD M N
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323
Query: 342 LVTWNAMIAGHAQMMDLA-----------KDDLS--------AHNG-GTEALSIFSKLNS 381
V+ M++G+A+ + KD +S NG EAL +F L
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL------SDVVVGTALVNMYKK 435
+ P YTF ++L + L LE G Q H+ +K GF D+ VG +L++MY K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG +E RVF M + +SW +MI G+A + +AL+LF+ ML +G +P+ VT +G
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L ACS+AG+V E YF M KE+ + PV DHY C++D+ R GC+EEA D I+ M +P
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQP 563
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ V+WS ++ C+ H N+ LG Y AE++ ++ P Y +L +++ GRW D V+
Sbjct: 564 DAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRK 623
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
L R + + SWI I+ V+ F D HPQ EI+ +L L + + GY
Sbjct: 624 LMRRRGVVKQPGCSWIDIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGY 677
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 89/221 (40%), Gaps = 43/221 (19%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D F+ +L +C +L + +H ++T F +V + L+++Y KCG ++ A +VF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 447 VEMSTRTLI-------------------------------SWTSMITGFANHSLSHQALQ 475
MS R + SW SMI GFA H +AL
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLID 533
F M N +F L+ACS + ++ K K +D +M LID
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKS---KYSLDVFMGSGLID 199
Query: 534 MFVR---LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + +GC FD ++ E N V W+ I ++G
Sbjct: 200 FYSKCGLVGCARRVFDGME----EKNVVSWNCLITCYEQNG 236
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/638 (34%), Positives = 353/638 (55%), Gaps = 16/638 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL C + L +H+++ K G D+ + L+++Y KCG++E A +F++ R
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV W ++ + Q + + +F M AG P T L C+ I LG+QIH
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ VK E D V L +YS G L A + ++EK+V+SWT++I ++
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L F +M GI P+ L S S C + ++R G Q+H+ GY+ ++ + N+++
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALV 488
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY +CG + EA F+ M + +T N +++G AQ H EAL +F +
Sbjct: 489 NLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQS--------GLHE---EALKVFMR 537
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ SG+K +++TF S L+ + L ++QG+QIHA +KTG + VG AL+++Y KCG
Sbjct: 538 MDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGS 597
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
E A F EMS R +SW ++IT + H +AL LF+ M G++PN VTF+G LAA
Sbjct: 598 FEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAA 657
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V E L YF+ M EY I+P DHY C+ID+F R G ++ A FI++M + +
Sbjct: 658 CSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAM 717
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ C+ H N+E+G +AA+ LL+L+P D SY +L + + +W + V+ + R
Sbjct: 718 VWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMR 777
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ + + SWI +K+ V++F D LHP + +I+ L + ++ GYKQ++
Sbjct: 778 DRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFH 837
Query: 679 DEES-----ASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
D+E + HSEKLA+ FGL++ P P+ V+K+
Sbjct: 838 DKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKN 875
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 286/542 (52%), Gaps = 29/542 (5%)
Query: 60 QEALSVLTEGPK--VQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + + + V + YV S+L C + + +IHA K G + FV +
Sbjct: 125 EEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAV 184
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +CG+ A++VF ++P + V++ +LISG+ Q E A+ +F +M +G P
Sbjct: 185 ITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDC 244
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT+ + L AC+SL ++ G Q+H+Y+ K D + SL LY CG + +A+ FN
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
NV+ W ++ A G+ + + F +M + GI+PN+FT I C + +G
Sbjct: 305 SDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLG 364
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+HSL +K G+ S++ V ++ +Y K G +++A+++ + + ++V+W +MIAG+ Q
Sbjct: 365 EQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQ- 423
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H +AL+ F ++ G+ PD +S ++ C+ + A+ QG QIHA
Sbjct: 424 ----------HECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIY 473
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+G+ DV + ALVN+Y +CGRI A F EM + I+ +++GFA L +AL+
Sbjct: 474 VSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALK 533
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDM 534
+F M +GV+ N TFV AL+A +N + + + +++ + + + + LI +
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGN--ALISL 591
Query: 535 FVRLGCIEEAFDFIKKMDF----EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
+ + G E+A KM+F E NEV W+ I C +HG +Q+ K +KP
Sbjct: 592 YGKCGSFEDA-----KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKP 646
Query: 589 KD 590
D
Sbjct: 647 ND 648
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/464 (31%), Positives = 248/464 (53%), Gaps = 22/464 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA V G + V L+++Y K G + A++VF+ L + VSW +++SGY QN
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ ++ M AG PT L + L++C+ E G+ IHA K+ + VGN+
Sbjct: 124 GEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNA 183
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +LY CGS A + F + ++ +++ T+I + G L F +M G+ P+
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T++S+ + C ++ L+ G Q+HS K G +S+ + S++ LY+KCG V+ A +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
N+V WN M+ Q+ DLAK + +F ++ ++G++P+ +T+ IL
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-----------SFELFCQMQAAGIRPNQFTYPCIL 352
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ ++ GEQIH+L++KTGF SD+ V L++MY K G +E+A RV + + ++
Sbjct: 353 RTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVV 412
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS--NA---GMVYEALG 510
SWTSMI G+ H AL F++M G+ P+ + A++ C+ NA G+ A
Sbjct: 413 SWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARI 472
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
Y + I + L++++ R G I EAF ++M+ +
Sbjct: 473 YVSGYSGDVSI------WNALVNLYARCGRIREAFSSFEEMELK 510
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 212/401 (52%), Gaps = 13/401 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + +Y +L+ C + + E IH+ VKTG D +V L+++Y K G +E+A
Sbjct: 340 GIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKA 399
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++V + L +VVSWTS+I+GYVQ+ + A+ F +M + G +P N+ L +A++ C+ +
Sbjct: 400 RRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGI 459
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++R G QIHA + D S+ N+L +LY+ CG + A +F + K+ ++ ++
Sbjct: 460 NAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLV 519
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
++G + L+ F +M G++ N FT S S + ++ G Q+H+ IK G++
Sbjct: 520 SGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHS 579
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
V N+++ LY KCG ++A+ F MS N V+WN +I +Q H
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQ-----------HGR 628
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGT 427
G EAL +F ++ G+KP+ TF +L CS + +E+G +++ + G
Sbjct: 629 GLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYA 688
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
+++++ + G+++RA + EM + W ++++ H
Sbjct: 689 CVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVH 729
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 211/442 (47%), Gaps = 24/442 (5%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC-SSLESIRL 193
+ R S ++G++ + P + +F D + AL AC + ++
Sbjct: 1 MTRRGAASLGRTLAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQV 60
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
+IHA V VGN L LYS G + A + F + ++ +SW ++ +
Sbjct: 61 VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG + L + +M G+ P + L+S+ S C G +H+ G K G+ S + V
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ LYL+CG A+++F M H + VT+N +I+GHAQ H G AL
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQ---------CGH--GEHAL 229
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
IF ++ SG+ PD T SS+L C+ L L++G Q+H+ K G SD ++ +L+++Y
Sbjct: 230 EIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLY 289
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A +F ++ W M+ F + ++ +LF M AG+RPNQ T+
Sbjct: 290 VKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYP 349
Query: 494 GALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
L C+ + G +L + + + V LIDM+ + G +E+A +
Sbjct: 350 CILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGV------LIDMYSKYGWLEKARRVL 403
Query: 549 KKMDFEPNEVIWSVFIAGCRRH 570
+ + E + V W+ IAG +H
Sbjct: 404 EMLK-EKDVVSWTSMIAGYVQH 424
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 6/198 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL V G K ++VS L N + + IHA ++KTG + V L
Sbjct: 529 EEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNAL 588
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++YGKCG+ E+A+ F + N VSW ++I+ Q+ + A+ +F M + G P +
Sbjct: 589 ISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPND 648
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT L ACS + + G + +Y + ++ G L+ A K
Sbjct: 649 VTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIE 708
Query: 235 RIR-EKNVMSWTTVIGAC 251
+ + M W T++ AC
Sbjct: 709 EMPIAADAMVWRTLLSAC 726
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/670 (34%), Positives = 358/670 (53%), Gaps = 55/670 (8%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A+ +HA +V G Q F+ T LVN+Y G++ ++ FD +P+ +V +W S+IS YV
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 153 NSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
N AI F +L P T L AC +L G++IH + K + +
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVF 151
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V SL +YS G A F+ + +++ SW +I +NG A Q L +M EG
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 211
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
I+ N T+ SI V + +Y K GL+D A
Sbjct: 212 IKMNFVTVVSILPV-------------------------------FVDMYAKLGLLDSAH 240
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS-SGMKPDLY 389
K+F+ + ++++WN +I G+AQ NG +EA+ ++ + + P+
Sbjct: 241 KVFEIIPVKDVISWNTLITGYAQ------------NGLASEAIEVYKMMEECKEIIPNQG 288
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T+ SIL + + AL+QG +IH +KT DV V T L+++Y KCGR+ A +F ++
Sbjct: 289 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 348
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ ++W ++I+ H + + L+LF +ML GV+P+ VTFV L+ACS++G V E
Sbjct: 349 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 408
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F +MQ EY IKP + HY C++D+ R G +E A+DFIK M +P+ IW + CR
Sbjct: 409 WCFRLMQ-EYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRI 467
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
HGN+ELG +A+++L ++ K+ Y +L +I+ + G+WE V V++L RE L +T WS
Sbjct: 468 HGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 527
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESAS 684
I + KV F + HP+ EI++ L L K K GY SF L D +E
Sbjct: 528 TIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHIL 587
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSE+LAIAFG+++TP SPI + K+ +C DCHN K I+ +T REI+VRDS R H F
Sbjct: 588 TSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHF 647
Query: 745 VNGHCTCRDF 754
+G C+C D+
Sbjct: 648 KDGICSCGDY 657
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 175/389 (44%), Gaps = 49/389 (12%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C +L + IH K G + FV L+++Y + G A+ +FD++
Sbjct: 120 TFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDM 176
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++ SW ++ISG +QN G A A L+ +RL
Sbjct: 177 PFRDMGSWNAMISGLIQN-------------------------GNAAQALDVLDEMRLEG 211
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+K S+ +Y+ G L+SA K F I K+V+SW T+I +NG
Sbjct: 212 ------IKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNG 265
Query: 256 EAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
A + + + KM+ E I PN+ T SI + +L+ G ++H IK ++ V
Sbjct: 266 LASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 324
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
++ +Y KCG + +A LF + + VTWNA+I+ H H + L
Sbjct: 325 ATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHG-----------IHGHAEKTL 373
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ G+KPD TF S+L+ CS +E+G+ L + G + +V++
Sbjct: 374 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLL 433
Query: 434 KKCGRIERASRVFVEMSTRTLIS-WTSMI 461
+ G +E A +M + S W +++
Sbjct: 434 GRAGYLEMAYDFIKDMPLQPDASIWGALL 462
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++VS+L + +L IH ++KT H D FV T L++VYGKCG + +A +F +
Sbjct: 289 TWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQV 348
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P+ + V+W ++IS + + E + +F +ML+ G P +VT + L+ACS + GK
Sbjct: 349 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 408
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGEN 254
+ +Y + + L G L A + + + W ++GAC +
Sbjct: 409 WCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIH 468
Query: 255 GEAVQGLRFFSKMLSE 270
G G +F S L E
Sbjct: 469 GNIELG-KFASDRLFE 483
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/709 (32%), Positives = 371/709 (52%), Gaps = 36/709 (5%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT--FLVNVYGKCGNMEEAQKVFDNLP 136
+L Q+C + K L IHA +++T D + + F + ++ A+KVFD +P
Sbjct: 144 ALFQQCTSFKQLKQ---IHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP 200
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGK 195
+ N+ SW LI +S P ++ VF+ ML + P T + A + +GK
Sbjct: 201 QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR--EKNVMSWTTVIGACGE 253
+H +K DD V NSL Y++CG L+ A F I K+++SW +++ +
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + L F +M +EG+ PN T+ S+ S C ++L +G +V + NL V
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNV 380
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD--LAKD--------DL 363
N+ + +++KCG V+ A+ LFD M ++V+W +I G+A+M + +A+D D+
Sbjct: 381 CNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440
Query: 364 SAHN----------GGTEALSIFS--KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
A N EAL+IF +L SG +PD T S L+ C++L A++ GE IH
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
K + + T+L++MY K G +E+A VF + + + W++MI G A H
Sbjct: 501 GYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
A++LF DM V+PN VTF L ACS++G+V E F+ M++ Y + P HY C+
Sbjct: 561 AAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCM 620
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ R G +EEA FI+ M P+ +W + C HGN+EL A +LL+++P +
Sbjct: 621 VDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNH 680
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+Y +L +++ G WE V+ ++ R+ L + S I I V+ F D HP S
Sbjct: 681 GAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSR 740
Query: 652 EIFKVLDELVEKAKCFGYKQ------QESFELTDEESASVYHSEKLAIAFGLLNTPIVSP 705
+I+ LDE++ + + GY Q E +E A HSEK+AIAFGL+
Sbjct: 741 DIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSEKMAIAFGLIRADSQQA 800
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I +VK+ +CRDCH K+++ + R+I++RD R H F GHC+C+D+
Sbjct: 801 IRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQDY 849
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 140/321 (43%), Gaps = 70/321 (21%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P ++L E + EG + VS++ C +L+ + +I + + V
Sbjct: 324 PDKALDLFERMR--NEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS--------------------------- 145
++++ KCG +E A+ +FDN+ + +VVSWT+
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441
Query: 146 ----LISGYVQNSQPELAIHVF--LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
LISGY Q+ +P+ A+ +F L + ++G P VTL + L+AC+ L ++ +G+ IH
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+ K + + + ++ SL +YS G + AI+ F+ I K+V W+ +I +G
Sbjct: 502 YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEA 561
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
+ F M ++PN T T++ C HS
Sbjct: 562 AIELFLDMQETQVKPNSVTFTNLLCACS-----------HS------------------- 591
Query: 320 LYLKCGLVDEAQKLFDGMSHV 340
GLVDE ++LFD M V
Sbjct: 592 -----GLVDEGKRLFDEMERV 607
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 4/227 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+ P +L L + G + + +S L C ++ E IH +I K +
Sbjct: 453 SGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNR 512
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ T L+++Y K G++E+A +VF ++ +V W+++I+G + + E AI +FLDM E
Sbjct: 513 NLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQET 572
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNS 228
P +VT L ACS + GK++ + + Y T + + + G L
Sbjct: 573 QVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEE 632
Query: 229 AIKAFNRIREKNVMS-WTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
A+K + S W ++GAC +G + S++L I+P
Sbjct: 633 ALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLE--IEP 677
>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
Length = 713
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/694 (32%), Positives = 376/694 (54%), Gaps = 25/694 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V + Y SLL +C + L +HA I ++ F+ LV+ Y K G++ AQ
Sbjct: 33 VSINDYASLLWQC---RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLA 89
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + N SW L++ Y QN P A +F M G P VTL TAL AC++ ++
Sbjct: 90 FGRITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNL 149
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LG++++ + E D+ V +SL ++Y C + A +AF+R EK+V+ WT +I A
Sbjct: 150 ALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAY 209
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASN 310
N + L +M EGI+ T S+ C + + LR G H +G S+
Sbjct: 210 AHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSS 269
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V +++ LY KCG VD+A+++ D M V+W AMIA +AQ +
Sbjct: 270 TVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQ-----------NGNAA 318
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLKTGFLSDVVVGTAL 429
EA+++F ++ G +P T S++ C+ L L G++IHA + F +++ A+
Sbjct: 319 EAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAV 378
Query: 430 VNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-AGVR 486
+ MY KCG +E A VF V + TR++++WT+MI +A + + +A++LF++ML+ G
Sbjct: 379 ITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTE 438
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+VTF+ L ACS+ G + +A +F M ++ + P DHY CL+D+ R G + EA
Sbjct: 439 PNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEK 498
Query: 547 -FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
++ DFE + V W F++ C+ +G++E AA+++ +L+P++ +L +++ + G
Sbjct: 499 LLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKG 558
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
R DVA ++N + + + SWI I ++V+ F +D HP+ EI+ L+ L + K
Sbjct: 559 RRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREIK 618
Query: 666 CFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY L D +E V YHSE+LA+A G+++TP + + VVK+ +C DCH
Sbjct: 619 EAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGIISTPPGTTLRVVKNLRVCSDCHA 678
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + R+IIVRD+ R H F +G C+C D+
Sbjct: 679 ATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDY 712
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 193/392 (49%), Gaps = 25/392 (6%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
++G + + + L C ++L+ ++ I D V + L+ +YG+C +E
Sbjct: 126 SQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRCREIE 185
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG---NYPTNVTLGTALT 183
EA++ FD P +VV WT++IS Y N + A+ + M G PT V+L L
Sbjct: 186 EAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGIKLGLPTYVSL---LD 242
Query: 184 ACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+S +R G H + T V +L +LY CG ++ A + + + + +
Sbjct: 243 ACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSV 302
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS-L 301
SWT +I A +NG A + + F M EG +P++ TL S+ C + +L +G ++H+ +
Sbjct: 303 SWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARI 362
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD--GMSHVNLVTWNAMIAGHAQMMDLA 359
++ +L + N+++ +Y KCG ++ A+++F+ + ++VTW AMI +AQ
Sbjct: 363 RSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQ----- 417
Query: 360 KDDLSAHNG-GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLK 416
NG G EA+ +F + L G +P+ TF S+L CS L LEQ E ++
Sbjct: 418 -------NGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPD 470
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
G LV++ + GR+ A ++ +
Sbjct: 471 FGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLR 502
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 361/658 (54%), Gaps = 22/658 (3%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D + L+ +YGKCG + A VFD + + NVVSWT+L+ G++QN P ++ +F M
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+G P + T T L AC L + +G+QIH VK + VGNS+ +YS CG +N
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F + +N++SW +I G + L F KM G +EFT TS C
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185
Query: 288 TMLSLRVGAQVHSLGIKLG--YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ +++ G Q+H+ I G Y+ N V +++ LY+KCG + A+++F + ++++W
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
A+I G+AQ +LA E++ +F +L S ++ D + SS++ + + ++
Sbjct: 246 TALILGYAQEGNLA-----------ESMELFRQLRESSIQVDGFILSSMMGVFADFALVQ 294
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+Q+HA +K D+ V ++++MY KCG I A R+F EM R +ISWT MITG+
Sbjct: 295 QGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYG 354
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H L +A++LF++M L P+ VT++ L CS++G+V + YF + + IK +
Sbjct: 355 KHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARV 414
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY C++D+ R G ++EA + + M E N IW ++ CR HG++ELG LL+
Sbjct: 415 EHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLR 474
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L ++ +Y M+ +I+ AG W++ ++ L + +KL + SW+ I +V+ F D
Sbjct: 475 LDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDD 534
Query: 646 LHPQSAEIFKVLDELVEKAK-CFGYKQQESFELTDEESASVY-----HSEKLAIAFGLLN 699
HP + +I ++L E+ + K GY + L D E S HSEKLAI L+
Sbjct: 535 THPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVC 594
Query: 700 TPIVSP---ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I V K+ +C DCH FIK ++ + +VRD+ R H+F +G C+CRD+
Sbjct: 595 GGLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDY 652
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 212/423 (50%), Gaps = 17/423 (4%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P+ SL + + G K ++ + L+ C L IH VKTG
Sbjct: 51 NGNPLESLLLFSKMGL--SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVN 108
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V ++++Y KCG + EA +F+ +P N++SW ++I+GY E A+ +F M E
Sbjct: 109 VVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEV 168
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLN 227
G + T + L ACS L +I+ G QIHA+++ + +T+V +L LY CG L
Sbjct: 169 GGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLF 228
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A + F+ I EK+V+SWT +I + G + + F ++ IQ + F L+S+ V
Sbjct: 229 MARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFA 288
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ G Q+H+ IK+ ++ V NSI+ +YLKCG+++EA++LF M N+++W
Sbjct: 289 DFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTV 348
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI G+ + H G EA+ +F ++ +PD T+ ++L CS +E+G
Sbjct: 349 MITGYGK-----------HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKG 397
Query: 408 EQIHA-LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFA 465
++ + L G + V +V++ + GR++ A + M + W ++++
Sbjct: 398 QEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACR 457
Query: 466 NHS 468
H
Sbjct: 458 VHG 460
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/273 (33%), Positives = 143/273 (52%), Gaps = 19/273 (6%)
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+G+ +L + N ++ +Y KCG + A +FD M N+V+W A++ GH Q
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQ---------- 50
Query: 365 AHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
NG E+L +FSK+ SG+KP+ +TFS+ L C L L+ G QIH + +KTGF
Sbjct: 51 --NGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVN 108
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VVG ++++MY KCGRI A+ +F M R LISW +MI G+ +AL LF+ M
Sbjct: 109 VVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEV 168
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIKPVMDHYMCLIDMFVRLGC 540
G ++ TF L ACS+ G + E + Y + + LID++V+ G
Sbjct: 169 GGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAG--ALIDLYVKCGK 226
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+ A ++ E + + W+ I G + GN+
Sbjct: 227 LFMARRVFSHIE-EKHVISWTALILGYAQEGNL 258
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/568 (36%), Positives = 337/568 (59%), Gaps = 20/568 (3%)
Query: 195 KQIHAYVVKYQTE-DDTSVGNSLC-SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
+QIHA+ +++ + +G L +L S C ++ A + F++I+ N+ +W T+I
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
E+ + L + +M I+P+ T + ++ +R G +VHS+ I+ G+ S +
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
V+N+++++Y CG + A KLF+ M+ NLVTWN++I G+A NG E
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL------------NGRPNE 224
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL++F ++ G++PD +T S+L+ C+ L AL G + H +K G ++ G AL++
Sbjct: 225 ALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLD 284
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG I +A +VF EM ++++SWTS+I G A + +AL+LF+++ G+ P+++T
Sbjct: 285 LYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEIT 344
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
FVG L ACS+ GMV E YF+ M++EY I P ++HY C++D+ R G +++A +FI+ M
Sbjct: 345 FVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNM 404
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+PN V+W + C HG++ LG A QLL+L+PK Y +L +++ S RW DV
Sbjct: 405 PMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVH 464
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
V+ E + +T S + ++++++ F D HPQ+ EI+ L E+ + K GY
Sbjct: 465 KVRRTMLREGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVP 524
Query: 672 QESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
S L D +E+A YHSEK+AIAF L+NT PI VVK+ +C DCH IK+I+
Sbjct: 525 HISNVLADIEEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLIS 584
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI+VRD R H F +GHC+C+D+
Sbjct: 585 KVFDREIVVRDRSRFHHFKDGHCSCKDY 612
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 203/431 (47%), Gaps = 28/431 (6%)
Query: 53 PVRSLGFQEALSVLTEGPKVQT-SSYVSLLQECVNRKSLSNAEIIHAHIVKTG---SHQD 108
P + F + S E PK ++LL C + K IHA ++ G ++ D
Sbjct: 17 PRKHFSFTISTSTCPESPKSYILKKCIALLLSCASSKF--KFRQIHAFSIRHGVPLTNPD 74
Query: 109 ---FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+ + T L C M A ++F + N+ +W ++I GY ++ P A+ ++
Sbjct: 75 MGKYLIFTLL----SFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQ 130
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M + P T L A + L +R G+++H+ ++ E V N+L +Y+ CG
Sbjct: 131 MHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGH 190
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
SA K F + E+N+++W +VI NG + L F +M G++P+ FT+ S+ S
Sbjct: 191 AESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSA 250
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C + +L +G + H +K+G NL N+++ LY KCG + +A K+FD M ++V+W
Sbjct: 251 CAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSW 310
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
++I G L+ + G EAL +F +L G+ P TF +L CS ++
Sbjct: 311 TSLIVG-----------LAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVD 359
Query: 406 QG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG 463
+G + + + G + + +V++ + G +++A M + + W +++
Sbjct: 360 EGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419
Query: 464 FANHSLSHQAL 474
H H AL
Sbjct: 420 CTIH--GHLAL 428
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/685 (31%), Positives = 384/685 (56%), Gaps = 26/685 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL C + ++L +H +VK+G + V L+++Y + G E+A+ VF +
Sbjct: 266 ALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRER 325
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+++SW S+++ +V N A+ + ++ML+ VT TAL+AC +LE++++ +H
Sbjct: 326 DLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETLKI---VH 382
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
A+V+ + +GN+L ++Y GS+ +A + + +++ ++W +IG +N E
Sbjct: 383 AFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPN 442
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS----LRVGAQVHSLGIKLGYASNLRVR 314
+ F+ + EG+ N T+ ++ S LS L G +H+ + G+ V+
Sbjct: 443 AAIEAFNLLREEGVPVNYITIVNLLS---AFLSPDDLLDHGMPIHAHIVVAGFELETFVQ 499
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+S++ +Y +CG ++ + +FD +++ N TWNA+++ +A + G EAL
Sbjct: 500 SSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAH-----------YGPGEEALK 548
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ K+ + G+ D ++FS I L L++G+Q+H+L +K GF S+ V A ++MY
Sbjct: 549 LIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYG 608
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I+ R+ + +R+ SW +I+ A H QA + F +ML G+RP+ VTFV
Sbjct: 609 KCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVS 668
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS+ G+V E L YF M ++ + ++H +C+ID+ R G + EA +FI KM
Sbjct: 669 LLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVP 728
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P +++W +A C+ HGN+EL AA++L +L D +Y + ++ S RW DV V+
Sbjct: 729 PTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVR 788
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ + SW+++K++V +F D HPQ+AEI+ L+EL + + GY S
Sbjct: 789 KQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMPDTS 848
Query: 675 FEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
+ L TDEE HSE++A+AFGL+N+ SP+ + K+ +C DCH+ K+++ +
Sbjct: 849 YSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVSQII 908
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R+II+RD+ R H F +G C+C D+
Sbjct: 909 GRKIILRDAYRFHHFSSGKCSCSDY 933
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 228/451 (50%), Gaps = 19/451 (4%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G++E AQ VFD +P N SW +L+SG+V+ + A+ F MLE G P++
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 178 LGTALTACSSLESIRLGK-QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ +TAC + G Q+HA+V+K D VG SL Y T G + F I
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
E N++SWT+++ NG + + + ++ +G+ NE + ++ CG ++ +G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
QV IK G + + V NS++ ++ C ++EA +FD M + ++WN++I
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITA----- 235
Query: 357 DLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
S HNG E +L FS++ + K D T S++L +C L G +H + +
Sbjct: 236 -------SVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVV 288
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K+G S+V V +L++MY + G+ E A VF +M R LISW SM+ ++ +AL+
Sbjct: 289 KSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALE 348
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
L +ML N VTF AL+AC N + + ++ + + ++ + L+ M+
Sbjct: 349 LLIEMLQTRKATNYVTFTTALSACYNLETLKIVHAFVILLGLHHNL--IIGN--ALVTMY 404
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ G + A K M + +EV W+ I G
Sbjct: 405 GKFGSMAAAQRVCKIMP-DRDEVTWNALIGG 434
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/453 (30%), Positives = 231/453 (50%), Gaps = 25/453 (5%)
Query: 54 VRSLGFQEALS----VLTEGPKVQTSSYV--SLLQECVNRKSLSNAEI-IHAHIVKTGSH 106
VR +Q+A+ +L G V+ SSYV SL+ C ++ +HAH++K G
Sbjct: 34 VRVGWYQKAMQFFCHMLEHG--VRPSSYVAASLVTACDRSGCMTEGAFQVHAHVIKCGLA 91
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
D FV T L++ YG G + E VF + N+VSWTSL+ GY N + + V+ +
Sbjct: 92 CDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRL 151
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
G Y + T + +C L LG Q+ V+K + SV NSL S++ C S+
Sbjct: 152 RRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSI 211
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A F+ ++E++ +SW ++I A NG + L +FS+M + + T++++ VC
Sbjct: 212 EEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVC 271
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
G+ +LR G +H + +K G SN+ V NS++ +Y + G ++A+ +F M +L++WN
Sbjct: 272 GSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWN 331
Query: 347 AMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+M+A H NG AL + ++ + + TF++ L+ C L L
Sbjct: 332 SMMASHVD------------NGNYPRALELLIEMLQTRKATNYVTFTTALSACYNLETL- 378
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+ +HA + G ++++G ALV MY K G + A RV M R ++W ++I G A
Sbjct: 379 --KIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHA 436
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ + A++ F + GV N +T V L+A
Sbjct: 437 DNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 217/433 (50%), Gaps = 29/433 (6%)
Query: 59 FQEALSVLTEGPKVQTSS----YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ AL +L E + + ++ + + L C N ++L +I+HA ++ G H + +
Sbjct: 343 YPRALELLIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNA 399
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG---N 171
LV +YGK G+M AQ+V +P + V+W +LI G+ N +P AI F + E G N
Sbjct: 400 LVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVN 459
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
Y T V L +A + L + G IHA++V E +T V +SL ++Y+ CG LN++
Sbjct: 460 YITIVNLLSAFLSPDDL--LDHGMPIHAHIVVAGFELETFVQSSLITMYAQCGDLNTSNY 517
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + KN +W ++ A G + L+ KM ++GI ++F+ + ++ G +
Sbjct: 518 IFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTL 577
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G Q+HSL IK G+ SN V N+ M +Y KCG +D+ ++ + +WN +I+
Sbjct: 578 LDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQPRSRSQRSWNILISA 637
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQI 410
L+ H +A F ++ G++PD TF S+L+ CS +++G
Sbjct: 638 -----------LARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGLAYF 686
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITG---FAN 466
+++ K G + + ++++ + G++ A +M T + W S++ N
Sbjct: 687 SSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKIHGN 746
Query: 467 HSLSHQAL-QLFE 478
L+ +A +LFE
Sbjct: 747 LELARKAADRLFE 759
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/743 (30%), Positives = 400/743 (53%), Gaps = 66/743 (8%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++T+G + S++ L+ C + +H I+K G ++ + L+ +Y KCG
Sbjct: 124 MVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGK 183
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++E ++F+ + +V+SW ++IS YV A+ +F +ML +G P +T+ + ++
Sbjct: 184 LKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVST 243
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA--------------- 229
C+ L+ + +GK++H Y+V + S+ N L +YS CG ++ A
Sbjct: 244 CAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVV 303
Query: 230 ---------IKA---------FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
+K+ F+++ E++++SWTT++ + G + L F +M E
Sbjct: 304 LWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFEN 363
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ P+E L ++ S C + +G VH+ + G + + N+++ LY KCG +DEA
Sbjct: 364 VIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEAL 423
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQM--MDLAKDDLSA------------------HNGGTE 371
+ F+ + + +WN+M+ G + +D A+D + H+ E
Sbjct: 424 RTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNE 483
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+ IF K+ SS +KPD T S+L+ C+++ AL G ++ K D ++GTAL++
Sbjct: 484 SFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALID 543
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG +E A +F ++ + + WT+M+ +A + +A+ L+ +M GV+P+ VT
Sbjct: 544 MYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVT 603
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ LAACS+ G+V E YF ++ Y I P + HY C++D+ R+G +EE FI++M
Sbjct: 604 FIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERM 663
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
EP+ IWS + CR H N+EL A +QL+++ P + ++ +L +I+ AGRW+DV+
Sbjct: 664 PIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVS 723
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
V+ E + + ++ I V+ F ++ + SA+I +L ++ + KQ
Sbjct: 724 KVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNLV---SADILCMLQDIERR---LLVKQ 777
Query: 672 QESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
EL+D S HSE+LA+AFGL+N SPI VV S MCRDCH+ +K+I+ R
Sbjct: 778 ----ELSDTTSQ---HSERLAVAFGLINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDR 830
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EI++RD+ R H+F +GHC+C+D+
Sbjct: 831 EIVIRDNYRFHRFTDGHCSCKDY 853
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/560 (23%), Positives = 247/560 (44%), Gaps = 94/560 (16%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQD----FFVMTFLVNVYGKCGNMEEAQKVFD 133
+ LL+ C N + S IHAH++ D V+ FL++V N++ A ++
Sbjct: 39 IDLLKSCSNIREFSP---IHAHLITANLIHDPEITSQVLAFLLSV----NNLDCAHQILS 91
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ W +L+ ++ P+ + + M+ G T + AC ++L
Sbjct: 92 YSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKL 151
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G ++H ++K + S+ N+L LYS CG L + F ++ ++V+SW T+I
Sbjct: 152 GSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVL 211
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + L F +ML G+ P+E T+ S+ S C + L +G ++H + +
Sbjct: 212 KGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSL 271
Query: 314 RNSIMYLYLKCGLVDE---------------------------------AQKLFDGMSHV 340
N ++ +Y KCG +DE A++LFD M+
Sbjct: 272 LNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNER 331
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+LV+W M++G+ Q GG E+L +F ++ + PD ++L+ C
Sbjct: 332 SLVSWTTMMSGYVQ-------------GGYYCESLELFQQMRFENVIPDEVALVTVLSAC 378
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
L + G +HA + G L D +G AL+++Y KCG+++ A R F ++ ++ SW
Sbjct: 379 VHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWN 438
Query: 459 SMITGF-------------------------------ANHSLSHQALQLFEDMLLAGVRP 487
SM+ GF H L +++ ++F M + V+P
Sbjct: 439 SMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKP 498
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
++ T + L++C+ G + + ++K E I ++ LIDM+ + GC+E A++
Sbjct: 499 DKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLG--TALIDMYGKCGCVEMAYE 556
Query: 547 FIKKMDFEPNEVIWSVFIAG 566
++ E N +W+ +A
Sbjct: 557 IFTQI-IEKNVFVWTAMMAA 575
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/674 (33%), Positives = 357/674 (52%), Gaps = 19/674 (2%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
KSL A+ H +++ G HQD +++ L+ + A VF P N+ + +LI
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI 73
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES-IRLGKQIHAYVVKYQT 206
G V N A+ V+ M + G P N T L AC+ L +G +H+ V+K
Sbjct: 74 RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D V L LYS G L A K F+ I EKNV+SWT +I E+G + L F
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
+L G++P+ FTL I C + L G + + G N+ V S++ +Y KCG
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGS 253
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMK 385
++EA+++FDGM ++V W+A+I G+A NG EAL +F ++ ++
Sbjct: 254 MEEARRVFDGMVEKDVVCWSALIQGYAS------------NGMPKEALDVFFEMQRENVR 301
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
PD Y + + CSRL ALE G L FLS+ V+GTAL++ Y KCG + +A V
Sbjct: 302 PDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEV 361
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F M + + + ++I+G A A +F M+ G++P+ TFVG L C++AG+V
Sbjct: 362 FKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLV 421
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+ YF M + + P ++HY C++D+ R G + EA D I+ M E N ++W +
Sbjct: 422 DDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLG 481
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
GCR H + +L + +QL++L+P + Y +L +I+ ++ RW++ +++ ++ + +
Sbjct: 482 GCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKL 541
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESAS 684
SW+ + V+ F D HP S +I++ L+ L + + GY F L D EE
Sbjct: 542 PGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVLFDVEEEEK 601
Query: 685 VY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
Y HSEKLA+AF L++T I VVK+ +C DCH IK+++ +T REIIVRD+ R
Sbjct: 602 EYFLGCHSEKLAVAFALISTGAKDVIRVVKNLRVCGDCHEAIKLVSKVTGREIIVRDNNR 661
Query: 741 LHKFVNGHCTCRDF 754
H F G C+CRD+
Sbjct: 662 FHHFTEGSCSCRDY 675
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 212/440 (48%), Gaps = 25/440 (5%)
Query: 178 LGTALTACSS--LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+G+ L C + L+S+ KQ H +++ DT + N L + A F +
Sbjct: 1 MGSELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQ 60
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS-LRV 294
N+ + T+I N + ++ M G P+ FT + C + V
Sbjct: 61 TPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHV 120
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +HSL IK G+ ++ V+ ++ LY K G + +A+K+FD + N+V+W A+I G+ +
Sbjct: 121 GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
EAL +F L G++PD +T IL CSR+ L G I
Sbjct: 181 SGCFG-----------EALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYM 229
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++G + +V V T+LV+MY KCG +E A RVF M + ++ W+++I G+A++ + +AL
Sbjct: 230 RESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEAL 289
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE---MMQKEYKIKPVMDHYMCL 531
+F +M VRP+ VG +ACS G + LG + M E+ PV+ L
Sbjct: 290 DVFFEMQRENVRPDCYAMVGVFSACSRLGAL--ELGNWARGLMDGDEFLSNPVLG--TAL 345
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPK 589
ID + + G + +A + K M + V+++ I+G G++ F Q++K ++P
Sbjct: 346 IDFYAKCGSVAQAKEVFKGMR-RKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQP- 403
Query: 590 DCESYAMLLDIFVSAGRWED 609
D ++ LL AG +D
Sbjct: 404 DGNTFVGLLCGCTHAGLVDD 423
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 16/304 (5%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL + L G + + + V +L C L++ I ++ ++GS + FV T
Sbjct: 184 FGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATS 243
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCG+MEEA++VFD + +VV W++LI GY N P+ A+ VF +M P
Sbjct: 244 LVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPD 303
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ +ACS L ++ LG + + + +G +L Y+ CGS+ A + F
Sbjct: 304 CYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFK 363
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+R K+ + + VI G F +M+ G+QP+ T + C +
Sbjct: 364 GMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDD 423
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMY------LYLKCGLVDEAQKLFDGMS-HVNLVTWNA 347
G + S G +S V +I + L + GL+ EAQ L M N + W A
Sbjct: 424 GHRYFS-----GMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGA 478
Query: 348 MIAG 351
++ G
Sbjct: 479 LLGG 482
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/705 (31%), Positives = 382/705 (54%), Gaps = 20/705 (2%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+EA ++ EG +V ++L+ V +L A +HA K G ++ FV +
Sbjct: 512 FEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSA 571
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++ Y CG + +A++VFD + + V+WT+++S Y +N PE + +F M A +
Sbjct: 572 LIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLN 631
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L + L A L S+ LGK IHA VK + + V +L +Y+ CG++ A AF
Sbjct: 632 PFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFE 691
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ +V+ W+ +I + + Q F +M+ + PNEF+L+S+ C M L +
Sbjct: 692 MVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDL 751
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ IK+G+ S L V N+++ LY KC ++ + ++F + VN V+WN +I G+
Sbjct: 752 GKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGY-- 809
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S G ALS+F ++ ++ + T+SS+L C+ ++ Q+H L
Sbjct: 810 ---------SKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLI 860
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K+ F SD +V +L++ Y KCG I A +F + L+SW ++I+G+A H + A
Sbjct: 861 EKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQ 920
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LF+ M ++ N +TFV L+ C + G+V + L F+ M+ ++ I+P M+HY C++ +
Sbjct: 921 ELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRL 980
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G + +A +FI + P+ ++W ++ C H N+ELG ++AE++L+++P+D +Y
Sbjct: 981 LGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTY 1040
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ +AG + VA + R + + SW+ IK +V++F HP I
Sbjct: 1041 VLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVGSEDHPCMRVIN 1100
Query: 655 KVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVV 709
+L+ L KA GY L D EE V HSE+LA+A+GL+ TP PI ++
Sbjct: 1101 AMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHSERLALAYGLVMTPPGHPIRIM 1160
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ C DCH K+I+ + +EIIVRD R H F G C+C D+
Sbjct: 1161 KNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEGTCSCGDY 1205
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 266/527 (50%), Gaps = 27/527 (5%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCGNMEE 127
P V + +Y LLQ CV R +H H+V++G + D F L+N+Y K G
Sbjct: 424 PGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGS 483
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VFD LP N+VS+ +L+ G+ + E A +F + G+ L T L +
Sbjct: 484 AHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVA 543
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++++ L +HA K + + VG++L YS CG ++ A + F+ I K+ ++WT +
Sbjct: 544 MDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAM 603
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ EN L+ FSKM + N F LTS+ + S+ +G +H+ +K Y
Sbjct: 604 VSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLY 663
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V +++ +Y KCG +++A+ F+ +++ +++ W+ MI+ +AQ N
Sbjct: 664 DTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQC-----------N 712
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+A +F ++ S + P+ ++ SS+L C+ + L+ G+QIH +K G S++ VG
Sbjct: 713 QNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGN 772
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+++Y KC +E + +F + +SW ++I G++ AL +F +M A V
Sbjct: 773 ALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPS 832
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
QVT+ L AC++ + +++K + ++ + LID + + GCI +A
Sbjct: 833 TQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSN--SLIDSYAKCGCIRDARE 890
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
F+ +K+ D V W+ I+G HG + A++L + K+
Sbjct: 891 IFETLKECDL----VSWNAIISGYAVHGQAAM----AQELFDMMSKN 929
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/687 (32%), Positives = 376/687 (54%), Gaps = 31/687 (4%)
Query: 86 NRKSLSNAEIIHAHIVKTG------SHQDFFVMTF--LVNVYGKCGNMEEAQKVFDNLPR 137
N K+L+ + IH ++ S+++F ++ L+N+Y KC + A+ +FD +
Sbjct: 24 NTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMSL 83
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+VVS+ L+ GY+ + + + +F +M+ + P T L+AC+ + G Q
Sbjct: 84 RSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQC 143
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-----NRIREKNVMSWTTVIGACG 252
H ++ K+ V +SL +YS C ++ A++ N + + + +V+ A
Sbjct: 144 HGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALV 203
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
E+G + + +M+ EG+ + T S+ +CG + L +G QVH+ +K G ++
Sbjct: 204 ESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVF 263
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TE 371
V + ++ ++ KCG V A+K+FDG+ + N+V W +++ + Q NG E
Sbjct: 264 VGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQ------------NGEFEE 311
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
L++ S ++ G + +TF+ +L + + AL G+ +HA K G + V+VG AL+N
Sbjct: 312 TLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALIN 371
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG I+ + VF +M R +I+W +MI G++ H L QAL LF+DML AG PN VT
Sbjct: 372 MYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVT 431
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
FVG L+AC++ +V E Y + K +K++P ++HY C++ + R G +EEA +F++
Sbjct: 432 FVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTT 491
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+ + V W V + C H N LG AE +L++ P+D +Y +L +++ A W+ V
Sbjct: 492 QVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVT 551
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
+++ + RE + + SWI I++ V+ F + HP+ +I+ + L+E K GY
Sbjct: 552 MIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVP 611
Query: 672 QESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
L D +ES YHSEKLAIA+GL+ P +PI V+K+ +C DCH +K+I+
Sbjct: 612 NIEAVLHDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLIS 671
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRD 753
+T R IIVRD+ R H F +G CTC D
Sbjct: 672 KVTNRLIIVRDASRFHHFRDGTCTCTD 698
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 5/267 (1%)
Query: 23 SSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQ 82
S + + N Y + L++ E V LG ++ EG + +YVS++
Sbjct: 181 SEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLG-----RMVDEGVVWDSVTYVSVMG 235
Query: 83 ECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVS 142
C + L +HA ++K G D FV + LV+++GKCG++ A+KVFD L NVV
Sbjct: 236 LCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVV 295
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
WTSL++ Y+QN + E +++ M G T L A + + ++R G +HA V
Sbjct: 296 WTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVE 355
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
K ++ VGN+L ++YS CG ++S+ F +R +++++W +I ++G Q L
Sbjct: 356 KLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALL 415
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTM 289
F MLS G PN T + S C +
Sbjct: 416 LFQDMLSAGECPNHVTFVGVLSACAHL 442
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/719 (32%), Positives = 389/719 (54%), Gaps = 27/719 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ G ++ L C ++ N IH IVK G +D FV LV+ Y +C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
G ++ A+KVFD + NVVSWTS+I GY + + A+ +F M+ P +VT+
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
++AC+ LE + G++++A++ E + + ++L +Y C +++ A + F+ N+
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ G + L F+ M+ G++P+ ++ S S C + ++ G H
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA 359
++ G+ S + N+++ +Y+KC D A ++FD MS+ +VTWN+++AG+ + +D A
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 360 KDD---------------LSAHNGGT---EALSIFSKLNSS-GMKPDLYTFSSILTICSR 400
+ +S G+ EA+ +F + S G+ D T SI + C
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
L AL+ + I+ K G DV +GT LV+M+ +CG E A +F ++ R + +WT+
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I A + +A++LF+DM+ G++P+ V FVGAL ACS+ G+V + F M K +
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
+ P HY C++D+ R G +EEA I+ M EPN+VIW+ +A CR GN+E+ YAA
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAA 662
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
E++ L P+ SY +L +++ SAGRW D+A V+ +E+ L + S I+I+ K + F
Sbjct: 663 EKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEF 722
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAF 695
D HP+ I +LDE+ ++A G+ S L D +E ++ HSEKLA+A+
Sbjct: 723 TSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAY 782
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GL+++ + I +VK+ +C DCH+F K + + REII+RD+ R H G C+C DF
Sbjct: 783 GLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/622 (26%), Positives = 278/622 (44%), Gaps = 93/622 (14%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---AQK 130
T + S L+ C K++ ++ H + K G D +T LV + G E A++
Sbjct: 32 TKATPSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 131 VFDNLPRINVV-SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VF+N + SLI GY + AI +FL M+ +G P T L+AC+
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G QIH +VK D V NSL Y+ CG L+SA K F+ + E+NV+SWT++I
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 250 ACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A + F +M+ E + PN T+ + S C + L G +V++ G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N + ++++ +Y+KC +D A++LFD NL NAM + + + G
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR------------QG 316
Query: 369 GT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
T EAL +F+ + SG++PD + S ++ CS+L + G+ H L+ GF S +
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH-------------------- 467
AL++MY KC R + A R+F MS +T+++W S++ G+ +
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 468 -----------SLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SL +A+++F M GV + VT + +AC + G + A + +
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEA------------------------------- 544
+K I+ + L+DMF R G E A
Sbjct: 497 EKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLL 598
FD + + +P+ V + + C G ++ G FY+ +L + P+D Y ++
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH-YGCMV 614
Query: 599 DIFVSAGRWED-VAVVKNLTRE 619
D+ AG E+ V +++++ E
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPME 636
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 38/339 (11%)
Query: 51 SEPVRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
S VR +EAL V + G + S +S + C +++ + H ++++ G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ----------- 155
+ L+++Y KC + A ++FD + VV+W S+++GYV+N +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 156 PEL--------------------AIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLG 194
PE AI VF M + G VT+ + +AC L ++ L
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K I+ Y+ K + D +G +L ++S CG SA+ FN + ++V +WT IGA
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G A + + F M+ +G++P+ + C ++ G ++ +KL S V
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 315 NSIMYLYL-KCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
M L + GL++EA +L + M N V WN+++A
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 14/223 (6%)
Query: 59 FQEALSVL-----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+EA+ V EG + +S+ C + +L A+ I+ +I K G D + T
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
LV+++ +CG+ E A +F++L +V +WT+ I E AI +F DM+E G P
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQ--TEDDTSVGNSLCSLYSTCGSLNSAIK 231
V ALTACS ++ GK+I ++K + +D G + L G L A++
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQ 628
Query: 232 AFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+ E N + W +++ AC VQG + +E IQ
Sbjct: 629 LIEDMPMEPNDVIWNSLLAAC-----RVQGNVEMAAYAAEKIQ 666
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/678 (33%), Positives = 364/678 (53%), Gaps = 20/678 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H + ++ G Q F L+ +Y K G +++++ +F++ ++VSW ++IS + Q+ +
Sbjct: 219 LHGYSLRVGD-QKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 277
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS-VGN 214
A+ F M+ G VT+ + L ACS LE + +GK+IHAYV++ + S VG+
Sbjct: 278 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 337
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQ 273
+L +Y C + S + F+ I + + W +I NG + L F +M+ G+
Sbjct: 338 ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLL 397
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN T+ S+ C + +H +KLG+ + V+N++M +Y + G +D ++ +
Sbjct: 398 PNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETI 457
Query: 334 FDGMSHVNLVTWNAMIAGH------AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
FD M + V+WN MI G+ + + L + N KP+
Sbjct: 458 FDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPN 517
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T ++L C+ L A+ +G++IHA ++ SD+ VG+ALV+MY KCG + + RVF
Sbjct: 518 AITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFN 577
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR-----PNQVTFVGALAACSNA 502
EM + +I+W +I H +AL+LF++M+ R PN+VTF+ AACS++
Sbjct: 578 EMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHS 637
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-IWS 561
G++ E L F M+ ++ ++P DHY C++D+ R G +EEA++ + M E ++V WS
Sbjct: 638 GLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWS 697
Query: 562 VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+ CR H N+ELG AA+ LL L+P Y +L +I+ SAG W V+ R+
Sbjct: 698 SLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMG 757
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL---- 677
+ + SWI +D+V+ F D HPQS ++ L+ L EK + GY S L
Sbjct: 758 VKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVD 817
Query: 678 -TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
++E+ HSEKLAIAFG+LNTP + I V K+ +C DCH K I+ + REIIVR
Sbjct: 818 EDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVR 877
Query: 737 DSKRLHKFVNGHCTCRDF 754
D +R H F G C+C D+
Sbjct: 878 DVRRFHHFKEGTCSCGDY 895
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 156/589 (26%), Positives = 270/589 (45%), Gaps = 55/589 (9%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTE----GPKVQT 74
++P++S T K S RS + + + RS F+EA+S E G +
Sbjct: 35 QKPTASPLTSKTPPKPTSPSRSTASWV--DALRSRTRSNDFREAISTYIEMTVSGARPDN 92
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ ++L+ + L E IHA VK G V LVN+YGKCG + + KVFD
Sbjct: 93 FAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFD 152
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ES 190
+ + VSW S I+ + + E A+ F M ++ TL + ACS+L
Sbjct: 153 RITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHG 212
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+RLGKQ+H Y ++ + T N+L ++Y+ G ++ + F +++++SW T+I +
Sbjct: 213 LRLGKQLHGYSLRV-GDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISS 271
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YAS 309
++ + L FF M+ EG++ + T+ S+ C + L VG ++H+ ++
Sbjct: 272 FSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIE 331
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V ++++ +Y C V+ +++FD + + WNAMI+G+A+ NG
Sbjct: 332 NSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR------------NGL 379
Query: 370 TE-ALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
E AL +F ++ +G+ P+ T +S++ C A E IH +K GF D V
Sbjct: 380 DEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQN 439
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL----- 482
AL++MY + G+++ + +F M R +SW +MITG+ AL L +M
Sbjct: 440 ALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTK 499
Query: 483 ------------AGVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVM 525
+PN +T + L C+ G A M+ + +
Sbjct: 500 DVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSA- 558
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
L+DM+ + GC+ + +M N + W+V I C HG E
Sbjct: 559 -----LVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGE 601
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 139/254 (54%), Gaps = 27/254 (10%)
Query: 60 QEALSVLTEGPKV-----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++AL + E KV T++ S++ CV+ ++ SN E IH + VK G +D +V
Sbjct: 381 EKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNA 440
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-------- 166
L+++Y + G M+ ++ +FD++ + VSW ++I+GYV + + A+ + +M
Sbjct: 441 LMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKD 500
Query: 167 --------LEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
+ G Y P +TL T L C++L +I GK+IHAY ++ D +VG++L
Sbjct: 501 VKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALV 560
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-----I 272
+Y+ CG LN + + FN + KNV++W +I ACG +G+ + L F M++E
Sbjct: 561 DMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEA 620
Query: 273 QPNEFTLTSISSVC 286
+PNE T ++ + C
Sbjct: 621 KPNEVTFITVFAAC 634
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/687 (32%), Positives = 379/687 (55%), Gaps = 23/687 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIV---KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
V+LL+ KSL + IHA +V +T D + L+N+Y KCG + A+K+FD
Sbjct: 27 VNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDR 86
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRL 193
+ + NVVSW++L+ GY+ + + +F +++ + YP L+ C+ ++
Sbjct: 87 MLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKE 146
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GKQ H Y++K V N+L +YS C ++SA++ + + +V S+ +++ A E
Sbjct: 147 GKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVE 206
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+G + + +M+ E + + T S+ +C + L++G Q+H+ +K G ++ V
Sbjct: 207 SGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFV 266
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEA 372
++++ Y KCG V A+K FDG+ N+V W A++ + Q NG E
Sbjct: 267 SSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQ------------NGHFEET 314
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L++F+K+ +P+ +TF+ +L C+ LVAL G+ +H + +GF + ++VG AL+NM
Sbjct: 315 LNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINM 374
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K G I+ + VF M R +I+W +MI G+++H L QAL +F+DM+ AG PN VTF
Sbjct: 375 YSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTF 434
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK-KM 551
+G L+AC + +V E YF+ + K++ ++P ++HY C++ + R G ++EA +F+K
Sbjct: 435 IGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTT 494
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+ + V W + C H N LG E ++++ P D +Y +L ++ A +W+ V
Sbjct: 495 QVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVV 554
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
++ L +E + + SW+ I++ + F HP+S +IF+ + +L+ K GY
Sbjct: 555 KIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPESTQIFEKVQQLLAMIKPLGYAP 614
Query: 672 QESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
L D +E +HSEKLA+A+GL+ P PI ++K+ MC DCH +K+I+
Sbjct: 615 DVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPGPIRIIKNLRMCDDCHIAVKLIS 674
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRD 753
T R IIVRD+ R H F G CTC D
Sbjct: 675 KATNRLIIVRDANRFHHFREGLCTCND 701
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 227/453 (50%), Gaps = 24/453 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ +L C + + + H +++K+G +V L+++Y +C +++ A ++ D +P
Sbjct: 131 FTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVP 190
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+V S+ S++S V++ A V M++ +VT + L C+ + ++LG Q
Sbjct: 191 GDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQ 250
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IHA ++K D V ++L Y CG + +A K F+ +R++NV++WT V+ A +NG
Sbjct: 251 IHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGH 310
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L F+KM E +PNEFT + + C ++++L G +H + G+ ++L V N+
Sbjct: 311 FEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNA 370
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G +D + +F M + +++TWNAMI G+ S H G +AL +F
Sbjct: 371 LINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGY-----------SHHGLGKQALLVF 419
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG----TALVNM 432
+ S+G P+ TF +L+ C L +++G +K DV G T +V +
Sbjct: 420 QDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKK---FDVEPGLEHYTCMVAL 476
Query: 433 YKKCGRIERASRVFVEMSTRT---LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ G ++ A F++ +T+ +++W +++ H + Q+ E ++ + P+
Sbjct: 477 LGRAGLLDEAEN-FMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVI--QMDPHD 533
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
V L+ ++ + + KE IK
Sbjct: 534 VGTYTLLSNMHAKARKWDGVVKIRKLMKERNIK 566
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 140/277 (50%), Gaps = 3/277 (1%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+YVS+L C + L IHA ++KTG D FV + L++ YGKCG + A+K FD L
Sbjct: 231 TYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGL 290
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
NVV+WT++++ Y+QN E +++F M P T L AC+SL ++ G
Sbjct: 291 RDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGD 350
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+H +V ++ VGN+L ++YS G+++S+ F+ + ++V++W +I +G
Sbjct: 351 LLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHG 410
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVR 314
Q L F M+S G PN T + S C + ++ G + K L
Sbjct: 411 LGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHY 470
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMI 349
++ L + GL+DEA+ + V ++V W ++
Sbjct: 471 TCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLL 507
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/719 (32%), Positives = 389/719 (54%), Gaps = 27/719 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ G ++ L C ++ N IH IVK G +D FV LV+ Y +C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
G ++ A+KVFD + NVVSWTS+I GY + + A+ +F M+ P +VT+
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
++AC+ LE + G++++A++ E + + ++L +Y C +++ A + F+ N+
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ G + L F+ M+ G++P+ ++ S S C + ++ G H
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA 359
++ G+ S + N+++ +Y+KC D A ++FD MS+ +VTWN+++AG+ + +D A
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 360 KDD---------------LSAHNGGT---EALSIFSKLNSS-GMKPDLYTFSSILTICSR 400
+ +S G+ EA+ +F + S G+ D T SI + C
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
L AL+ + I+ K G DV +GT LV+M+ +CG E A +F ++ R + +WT+
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I A + +A++LF+DM+ G++P+ V FVGAL ACS+ G+V + F M K +
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
+ P HY C++D+ R G +EEA I+ M EPN+VIW+ +A CR GN+E+ YAA
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAA 662
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
E++ L P+ SY +L +++ SAGRW D+A V+ +E+ L + S I+I+ K + F
Sbjct: 663 EKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEF 722
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAF 695
D HP+ I +LDE+ ++A G+ S L D +E ++ HSEKLA+A+
Sbjct: 723 TSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAY 782
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GL+++ + I +VK+ +C DCH+F K + + REII+RD+ R H G C+C DF
Sbjct: 783 GLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 165/622 (26%), Positives = 278/622 (44%), Gaps = 93/622 (14%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---AQK 130
T + S L+ C K++ ++ H + K G D +T LV + G E A++
Sbjct: 32 TKATPSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 131 VFDNLPRINVV-SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VF+N + SLI GY + AI +FL M+ +G P T L+AC+
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G QIH +VK D V NSL Y+ CG L+SA K F+ + E+NV+SWT++I
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 250 ACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A + F +M+ E + PN T+ + S C + L G +V++ G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N + ++++ +Y+KC +D A++LFD NL NAM + + + G
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR------------QG 316
Query: 369 GT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
T EAL +F+ + SG++PD + S ++ CS+L + G+ H L+ GF S +
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH-------------------- 467
AL++MY KC R + A R+F MS +T+++W S++ G+ +
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 468 -----------SLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SL +A+++F M GV + VT + +AC + G + A + +
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEA------------------------------- 544
+K I+ + L+DMF R G E A
Sbjct: 497 EKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLL 598
FD + + +P+ V + + C G ++ G FY+ +L + P+D Y ++
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH-YGCMV 614
Query: 599 DIFVSAGRWED-VAVVKNLTRE 619
D+ AG E+ V +++++ E
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPME 636
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 38/339 (11%)
Query: 51 SEPVRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
S VR +EAL V + G + S +S + C +++ + H ++++ G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ----------- 155
+ L+++Y KC + A ++FD + VV+W S+++GYV+N +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 156 PEL--------------------AIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLG 194
PE AI VF M + G VT+ + +AC L ++ L
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K I+ Y+ K + D +G +L ++S CG SA+ FN + ++V +WT IGA
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G A + + F M+ +G++P+ + C ++ G ++ +KL S V
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 315 NSIMYLYL-KCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
M L + GL++EA +L + M N V WN+++A
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 14/223 (6%)
Query: 59 FQEALSVL-----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+EA+ V EG + +S+ C + +L A+ I+ +I K G D + T
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
LV+++ +CG+ E A +F++L +V +WT+ I E AI +F DM+E G P
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQ--TEDDTSVGNSLCSLYSTCGSLNSAIK 231
V ALTACS ++ GK+I ++K + +D G + L G L A++
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQ 628
Query: 232 AFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+ E N + W +++ AC VQG + +E IQ
Sbjct: 629 LIEDMPMEPNDVIWNSLLAAC-----RVQGNVEMAAYAAEKIQ 666
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/705 (30%), Positives = 381/705 (54%), Gaps = 24/705 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EALS+ G T ++V+ LQ + + IH +K+ D +V L+
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALI 290
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y KCG ME+A++VF ++ + VSW +L+SG VQN A++ F DM + P V
Sbjct: 291 AMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQV 350
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
++ + A ++ GK++HAY ++ + + +GN+L +Y+ C + AF +
Sbjct: 351 SVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECM 410
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EK+++SWTT+I +N ++ + F K+ +G+ + + S+ C + S
Sbjct: 411 HEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIR 470
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
++H K A ++ ++N+I+ +Y + G D A++ F+ + ++V+W +MI
Sbjct: 471 EIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMIT------ 523
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG EAL +F L + ++PD S L+ + L +L++G++IH +
Sbjct: 524 ------CCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLI 577
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF + + ++LV+MY CG +E + ++F + R LI WTSMI H ++A+
Sbjct: 578 RKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIA 637
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF+ M V P+ +TF+ L ACS++G++ E +FE+M+ Y+++P +HY C++D+
Sbjct: 638 LFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLL 697
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R +EEA+ F++ M +P+ +W + C H N ELG AA++LL+ K+ YA
Sbjct: 698 SRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYA 757
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ +IF + GRW DV V+ + L + SWI + +K+++F D HPQ+ +I+
Sbjct: 758 LISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYL 817
Query: 656 VLDELVE-KAKCFGYKQQESF---ELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVV 709
L + + K GY Q F +++EE + HSE+LA+ +GLL TP + I +
Sbjct: 818 KLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRIT 877
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH F KI + ++ R ++VRD+ R H F G C+C DF
Sbjct: 878 KNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERGLCSCGDF 922
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 260/531 (48%), Gaps = 34/531 (6%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V S + EA+ + E G + ++ S+L+ C IH VK G +
Sbjct: 121 VSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFV 180
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
FV L+ +YGKCG++ A+ +FD + + + VSW S+IS +V + A+ +F M
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQ 240
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
E G T AL ++LG IH +K D V N+L ++Y+ CG +
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRME 300
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A + F + ++ +SW T++ +N L +F M + +P++ ++ ++ + G
Sbjct: 301 DAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASG 360
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+L G +VH+ I+ G SN+++ N+++ +Y KC V F+ M +L++W
Sbjct: 361 RSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTT 420
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+IAG+AQ + EA+++F K+ GM D S+L CS L +
Sbjct: 421 IIAGYAQ-----------NECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
+IH K L+D+++ A+VN+Y + G + A R F + ++ ++SWTSMIT ++
Sbjct: 470 REIHGYVFKRD-LADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN 528
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV---YEALGYFEMMQKEYKIK-P 523
L +AL+LF + ++P+ + + AL+A +N + E G+ +++K + ++ P
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGF--LIRKGFFLEGP 586
Query: 524 VMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ L+DM+ G +E + F +K+ D ++W+ I HG
Sbjct: 587 IASS---LVDMYACCGTVENSRKMFHSVKQRDL----ILWTSMINANGMHG 630
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 241/464 (51%), Gaps = 20/464 (4%)
Query: 43 KLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHA 98
K I +N ++ + FQ +L++L+ P S ++ LL CV K+L + +HA
Sbjct: 12 KSISVNTLNKGTLNPAFQ-SLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHA 70
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL 158
++K SH F+ T L+++Y KCG++++A KVFD + + +W +++ +V + +
Sbjct: 71 RLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLE 128
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
AI ++ +M G T + L AC +L RLG +IH VK + V N+L +
Sbjct: 129 AIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIA 188
Query: 219 LYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+Y CG L A F+ I +++ +SW ++I A G+ ++ L F +M G+ N
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNT 248
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+T + +++G +H +K + +++ V N+++ +Y KCG +++A+++F
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDAERVFAS 308
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M + V+WN +++G Q +L +D AL+ F + +S KPD + +++
Sbjct: 309 MLCRDYVSWNTLLSGLVQ-NELYRD----------ALNYFRDMQNSAQKPDQVSVLNLIA 357
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
R L G+++HA ++ G S++ +G L++MY KC ++ F M + LIS
Sbjct: 358 ASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLIS 417
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
WT++I G+A + +A+ LF + + G+ + + L ACS
Sbjct: 418 WTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 202/397 (50%), Gaps = 37/397 (9%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C +++++ G+Q+HA ++K + + L +Y CGSL A+K F+ + E+ +
Sbjct: 53 LDLCVAVKALPQGQQLHARLLK--SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTI 110
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W ++GA +G+ ++ + + +M G+ + T S+ CG + R+GA++H +
Sbjct: 111 FTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDLA 359
+K G+ + V N+++ +Y KCG + A+ LFDG M + V+WN++I+ H
Sbjct: 171 AVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHV------ 224
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
EALS+F ++ G+ + YTF + L ++ G IH LK+
Sbjct: 225 -----TEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNH 279
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+DV V AL+ MY KCGR+E A RVF M R +SW ++++G + L AL F D
Sbjct: 280 FADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRD 339
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIKPVMDHYM----CLI 532
M + +P+QV+ + +AA +G + KE Y I+ +D M LI
Sbjct: 340 MQNSAQKPDQVSVLNLIAASGRSGNLLNG--------KEVHAYAIRNGLDSNMQIGNTLI 391
Query: 533 DMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAG 566
DM+ + C++ AF+ + + D + W+ IAG
Sbjct: 392 DMYAKCCCVKHMGYAFECMHEKDL----ISWTTIIAG 424
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/612 (35%), Positives = 358/612 (58%), Gaps = 23/612 (3%)
Query: 153 NSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
N +HV LD++ G+ P L C+ L ++ GK +H +++ + +D
Sbjct: 69 NPNSTTGLHV-LDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLV 127
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG---EAVQGLRFFSKML 268
+ NS+ +Y+ CGSL A + F+ + K+V++WT++I ++G A L F +M+
Sbjct: 128 IKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMV 187
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+G++PNEF L+S+ CG + S G Q+H K G+ N+ V +S++ +Y +CG +
Sbjct: 188 RDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELR 247
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
E++ +FD + N V+WNA+I+G A+ + G EAL +F K+ G
Sbjct: 248 ESRLVFDELESKNEVSWNALISGFARKGE-----------GEEALGLFVKMQREGFGATE 296
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+T+S++L S +LEQG+ +HA +K+G VG L++MY K G I A +VF
Sbjct: 297 FTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDR 356
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNAGMVYE 507
+ ++S SM+ G+A H L +A++LFE+M+L + PN +TF+ L ACS+AG++ E
Sbjct: 357 LVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDE 416
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L YFE+M+K Y ++P + HY ++D+F R G +++A FI++M EPN IW +
Sbjct: 417 GLYYFELMKK-YGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGAS 475
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
+ H N E+G YAA+++L+L P ++ +L +I+ SAG+W+DVA V+ ++ L +
Sbjct: 476 KMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPA 535
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEES 682
SW+ I++ V+ F ND HPQ +++++ + L +K K GY S + ++E
Sbjct: 536 CSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKEL 595
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
YHSEKLA+AF LLNT S I ++K+ +C DCH+ IK ++ + REIIVRD+ R H
Sbjct: 596 NLQYHSEKLALAFALLNTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFH 655
Query: 743 KFVNGHCTCRDF 754
F +G C+CRD+
Sbjct: 656 HFRDGSCSCRDY 667
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 196/377 (51%), Gaps = 15/377 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y LL+ C L +++H H++ + D + ++ +Y KCG++E A++VFD +
Sbjct: 94 YNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMC 153
Query: 137 RINVVSWTSLISGYVQN---SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+VV+WTS+I+GY Q+ S A+ +FL+M+ G P L + + C L S
Sbjct: 154 VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVD 213
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GKQIH KY +++ VG+SL +Y+ CG L + F+ + KN +SW +I
Sbjct: 214 GKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFAR 273
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
GE + L F KM EG EFT +++ T SL G +H+ +K G V
Sbjct: 274 KGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYV 333
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++++Y K G + +A+K+FD + V++V+ N+M+ G+AQ H G EA+
Sbjct: 334 GNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQ-----------HGLGKEAV 382
Query: 374 SIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+F ++ ++P+ TF S+LT CS L++G L K G + T +V++
Sbjct: 383 ELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDL 442
Query: 433 YKKCGRIERASRVFVEM 449
+ + G +++A EM
Sbjct: 443 FGRAGLLDQAKSFIEEM 459
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 148/291 (50%), Gaps = 2/291 (0%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ +G + + SL++ C S + + IH K G ++ FV + LV++Y +C
Sbjct: 184 LEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC 243
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + E++ VFD L N VSW +LISG+ + + E A+ +F+ M G T T L
Sbjct: 244 GELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+ S+ S+ GK +HA+++K + VGN+L +Y+ G++ A K F+R+ + +V+
Sbjct: 304 CSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVV 363
Query: 243 SWTTVIGACGENGEAVQGLRFFSK-MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
S +++ ++G + + F + ML I+PN+ T S+ + C L G L
Sbjct: 364 SCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFEL 423
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
K G L +++ L+ + GL+D+A+ + M N W A++
Sbjct: 424 MKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGA 474
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/693 (32%), Positives = 375/693 (54%), Gaps = 19/693 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + +Y +++ C L+ E +H ++K+G D ++ L+ +Y K G +E A
Sbjct: 121 GVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESA 180
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ VF +P ++VSW S+ISGYV ++ F +M +G ++ L ACS
Sbjct: 181 EMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLE 240
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+R GK+IH +++ + E D V SL +Y+ CG ++ A + F++I +K++++W +I
Sbjct: 241 GFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMI 300
Query: 249 GACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
G N ++ + + KM G + P+ T+ ++ C + ++ +G VH I+ G+
Sbjct: 301 GGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGF 360
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+L + +++ +Y +CG + A+ LF M+ NL++WNAMIA + + N
Sbjct: 361 LPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTK------------N 408
Query: 368 G-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +A+++F L + +KPD T +SIL + L +L + EQIH K S+ V
Sbjct: 409 GENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS 468
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
++V MY KCG + RA +F M+ + +ISW ++I +A H +++LF +M G
Sbjct: 469 NSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFE 528
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN TFV L +CS AG+V E YF M+++Y I P ++HY C++D+ R G ++ A +
Sbjct: 529 PNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKN 588
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI++M P IW + R G++EL AAE +L L+ + Y +L +++ AGR
Sbjct: 589 FIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGR 648
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
WEDV +K ++E L ++ S + + K + F D + ++ VLD + +K
Sbjct: 649 WEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGE 708
Query: 667 FGYKQQ-ESFELTDEE----SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
Y F +D E +++ HS +LAI FGL++T I +P+LV K+ +C CH F
Sbjct: 709 DVYVHSLTKFRPSDLEKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHRF 768
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ T REIIVRDSK H F GHC+C D+
Sbjct: 769 AKRISETTKREIIVRDSKIFHHFNGGHCSCGDY 801
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 248/492 (50%), Gaps = 33/492 (6%)
Query: 95 IIHAHIVKTGS---HQDFFV------MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
I+ I KT +Q F V +T ++ Y + G M+ A +F+N+ + + W
Sbjct: 37 ILKPRIFKTARSKRNQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNV 96
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+I G+V N A+ + M G N T + AC L + G+++H V+K
Sbjct: 97 MIRGFVDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSG 156
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D +GNSL +Y+ G + SA F + ++++SW ++I G+ + L F
Sbjct: 157 LDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFR 216
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M + GI+ + F++ I C LR G ++H ++ ++ V+ S++ +Y KCG
Sbjct: 217 EMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCG 276
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-M 384
+D A++LFD ++ ++V WNAMI G++ L+A + E+ + K+ G +
Sbjct: 277 RMDYAERLFDQITDKSIVAWNAMIGGYS---------LNAQS--FESFAYVRKMQEGGKL 325
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD T ++L C++L A+ G+ +H ++ GFL +V+ TALV+MY +CG+++ A
Sbjct: 326 HPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAEC 385
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
+F +M+ R LISW +MI + + + +A+ LF+D+ ++P+ T L A +
Sbjct: 386 LFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELAS 445
Query: 505 VYEA---LGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
+ EA GY K+K + ++ ++ M+ + G + A + +M F+ + +
Sbjct: 446 LREAEQIHGYVT------KLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFK-DVIS 498
Query: 560 WSVFIAGCRRHG 571
W+ I HG
Sbjct: 499 WNTVIMAYAIHG 510
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/667 (34%), Positives = 367/667 (55%), Gaps = 20/667 (2%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
++HAH + G + FV + +V++Y K E A+KVFD +P + V W ++ISG+ +NS
Sbjct: 134 LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNS 193
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E +I VF+DML+ G + TL T LTA + L+ RLG I K D V
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L SLYS CG F++I + +++S+ +I N E + F ++L+ G +
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N TL + V L++ + +L +K+G V ++ +Y + V A++LF
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
D +L +WNAMI+G+ Q NG T+ A+S+F ++ + P+ T +S
Sbjct: 374 DESPEKSLASWNAMISGYTQ------------NGLTDRAISLFQEMMPQ-LSPNPVTVTS 420
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL+ C++L AL G+ +H L S+V V TALV+MY KCG I A ++F M +
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+++W +MITG+ H +AL+LF +ML +G+ P VTF+ L ACS++G+V E F
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M Y +P+ +HY C++D+ R G + A +FI++M EP +W + C H N
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
E+ A+++L +L P++ Y +L +I+ + + A V+ + ++ KL++T + I I
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES----FELTDEESASV--YH 687
D+ Y F D HPQ+ IF++L++L K + GY+ + ++ DEE + H
Sbjct: 661 DDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLAIAFGL++T + I ++K+ +C DCH K I+ +T R I+VRD+ R H F NG
Sbjct: 721 SEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 781 ICSCGDY 787
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 240/490 (48%), Gaps = 19/490 (3%)
Query: 86 NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
N +LS I A ++ G H D +T L + + G + +++F+ + + ++ +
Sbjct: 23 NATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNV 82
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
LI G+ N P+ +I ++ + + N P N T A++A S LE R+G +HA+ +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+ VG+++ LY A K F+ + E++ + W T+I N +R F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
ML G+ + TL ++ + + R+G + L K G S++ V ++ LY KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSG 383
G + + LFD + +L+++NAMI+G+ N TE A+++F +L +SG
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGY------------TFNHETESAVTLFRELLASG 310
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
+ + T ++ + L+ I L+LK G + V TAL +Y + ++ A
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
++F E ++L SW +MI+G+ + L+ +A+ LF++M + + PN VT L+AC+ G
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLG 429
Query: 504 MVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
+ ++G + + K +++ + L+DM+ + G I EA M + N V W+
Sbjct: 430 AL--SIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNA 486
Query: 563 FIAGCRRHGN 572
I G HG+
Sbjct: 487 MITGYGLHGH 496
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 2/244 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G +V +S+ V L+ + L + +I +K G V T L VY +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+++FD P ++ SW ++ISGY QN + AI +F +M+ + P VT+ + L+A
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS-PNPVTVTSILSA 424
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L ++ +GK +H + + E + V +L +Y+ CGS+ A + F+ + +KNV++W
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGI 303
+I G +G + L+ F +ML GI P T SI C + G ++ HS+
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 304 KLGY 307
G+
Sbjct: 545 NYGF 548
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG ++ SL FQE + L+ P TS +L C +LS + +H I
Sbjct: 394 NGLTDRAISL-FQEMMPQLSPNPVTVTS----ILSACAQLGALSIGKWVHGLIKSERLES 448
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ +V T LV++Y KCG++ EA+++FD + NVV+W ++I+GY + + A+ +F +ML
Sbjct: 449 NVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEML 508
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
++G PT VT + L ACS + G +I H+ Y + + + + G L
Sbjct: 509 QSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQL 568
Query: 227 NSAIKAFNRIR-EKNVMSWTTVIGAC 251
+A++ R+ E W ++GAC
Sbjct: 569 TNALEFIERMPLEPGPAVWGALLGAC 594
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 228/667 (34%), Positives = 367/667 (55%), Gaps = 20/667 (2%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
++HAH + G + FV + +V++Y K E A+KVFD +P + V W ++ISG+ +NS
Sbjct: 134 LLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNS 193
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E +I VF+DML+ G + TL T LTA + L+ RLG I K D V
Sbjct: 194 YFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLT 253
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L SLYS CG F++I + +++S+ +I N E + F ++L+ G +
Sbjct: 254 GLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRV 313
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N TL + V L++ + +L +K+G V ++ +Y + V A++LF
Sbjct: 314 NSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLF 373
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
D +L +WNAMI+G+ Q NG T+ A+S+F ++ + P+ T +S
Sbjct: 374 DESPEKSLASWNAMISGYTQ------------NGLTDRAISLFQEMMPQ-LSPNPVTVTS 420
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL+ C++L AL G+ +H L S+V V TALV+MY KCG I A ++F M +
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+++W +MITG+ H +AL+LF +ML +G+ P VTF+ L ACS++G+V E F
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M Y +P+ +HY C++D+ R G + A +FI++M EP +W + C H N
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
E+ A+++L +L P++ Y +L +I+ + + A V+ + ++ KL++T + I I
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES----FELTDEESASV--YH 687
D+ Y F D HPQ+ IF++L++L K + GY+ + ++ DEE + H
Sbjct: 661 DDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLAIAFGL++T + I ++K+ +C DCH K I+ +T R I+VRD+ R H F NG
Sbjct: 721 SEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 781 ICSCGDY 787
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/490 (26%), Positives = 240/490 (48%), Gaps = 19/490 (3%)
Query: 86 NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
N +LS I A ++ G H D +T L + + G + +++F+ + + ++ +
Sbjct: 23 NATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNV 82
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
LI G+ N P+ +I ++ + + N P N T A++A S LE R+G +HA+ +
Sbjct: 83 LIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD 142
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+ VG+++ LY A K F+ + E++ + W T+I N +R F
Sbjct: 143 GVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVF 202
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
ML G+ + TL ++ + + R+G + L K G S++ V ++ LY KC
Sbjct: 203 VDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKC 262
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSG 383
G + + LFD + +L+++NAMI+G+ N TE A+++F +L +SG
Sbjct: 263 GKSCKGRILFDQIDQPDLISYNAMISGY------------TFNHETESAVTLFRELLASG 310
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
+ + T ++ + L+ I L+LK G + V TAL +Y + ++ A
Sbjct: 311 QRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFAR 370
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
++F E ++L SW +MI+G+ + L+ +A+ LF++M + + PN VT L+AC+ G
Sbjct: 371 QLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLG 429
Query: 504 MVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
+ ++G + + K +++ + L+DM+ + G I EA M + N V W+
Sbjct: 430 AL--SIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNA 486
Query: 563 FIAGCRRHGN 572
I G HG+
Sbjct: 487 MITGYGLHGH 496
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 2/244 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G +V +S+ V L+ + L + +I +K G V T L VY +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+++FD P ++ SW ++ISGY QN + AI +F +M+ + P VT+ + L+A
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLS-PNPVTVTSILSA 424
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L ++ +GK +H + + E + V +L +Y+ CGS+ A + F+ + +KNV++W
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGI 303
+I G +G + L+ F +ML GI P T SI C + G ++ HS+
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 304 KLGY 307
G+
Sbjct: 545 NYGF 548
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG ++ SL FQE + L+ P TS +L C +LS + +H I
Sbjct: 394 NGLTDRAISL-FQEMMPQLSPNPVTVTS----ILSACAQLGALSIGKWVHGLIKSERLES 448
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ +V T LV++Y KCG++ EA+++FD + NVV+W ++I+GY + + A+ +F +ML
Sbjct: 449 NVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEML 508
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
++G PT VT + L ACS + G +I H+ Y + + + + G L
Sbjct: 509 QSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQL 568
Query: 227 NSAIKAFNRIR-EKNVMSWTTVIGAC 251
+A++ R+ E W ++GAC
Sbjct: 569 TNALEFIERMPLEPGPAVWGALLGAC 594
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 1058
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/679 (32%), Positives = 373/679 (54%), Gaps = 34/679 (5%)
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+KTG D V + ++N Y + G+++ A F+ +P N SWT++I+ + Q + + AI
Sbjct: 388 IKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAI 447
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
++ + E T T +TA + + I+ + I ++ + N++ + Y
Sbjct: 448 QLYERVPEQ----TVATKTAMMTAYAQVGRIQKARLIFDEILN----PNVVAWNAIIAGY 499
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
+ G L A F ++ KN SW +I +N E+ + L ++ G P++ + T
Sbjct: 500 TQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFT 559
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
S S C + + +G +HSL IK G N V N ++ +Y KCG V++ +F +
Sbjct: 560 SALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK 619
Query: 341 NLVTWNAMIAGHAQ--MMD--------LAKDD-------LSAH---NGGTEALSIFSKLN 380
+ V+WN++I+G ++ M+D + K D +SA+ G AL +F +
Sbjct: 620 DTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDML 679
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+ G+KP+ T +S+L+ C L A++ GEQ HAL K GF + + VG +L+ MY KCG E
Sbjct: 680 ARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YE 738
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
VF EM LI+W +++ G A + L +A+++FE M + G+ P+Q++F+G L ACS
Sbjct: 739 DGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACS 798
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+AG+V E +F M ++Y I P++ HY C++D+ R G + EA I+ M +P+ VIW
Sbjct: 799 HAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIW 858
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ CR H N+ELG AE+L ++ +Y +L ++F S G W+ VA ++ L +++
Sbjct: 859 EALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQ 918
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
L++ SWI++K+K++ F D H Q EI+ L E + GY +F L D
Sbjct: 919 GLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDV 978
Query: 681 ESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIV 735
E +YHSEKLA+ FG+L+TP SPI ++K+ +C DCH F+K ++ +T R+II+
Sbjct: 979 EEEQKQNELLYHSEKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIII 1038
Query: 736 RDSKRLHKFVNGHCTCRDF 754
RD R H F +G C+C D+
Sbjct: 1039 RDGNRFHHFRDGSCSCGDY 1057
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 226/492 (45%), Gaps = 61/492 (12%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+V Y C M EA+++FD +P N VSW +ISGYV S A VF+ M P
Sbjct: 301 VVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPD 360
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L+A + L+ + L + +K E D VG+++ + Y+ GSL+ A+ F
Sbjct: 361 QSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFE 420
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E+N SWTT+I A + G ++ + ++ + + +T+ + V + +
Sbjct: 421 TMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLI 480
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
++ + N+ N+I+ Y + G++ EA+ LF M N +W AMIAG Q
Sbjct: 481 FDEILN--------PNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQ 532
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ EAL + +L+ SG P +F+S L+ C+ + +E G IH+L
Sbjct: 533 -----------NEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLA 581
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFV--------------------------- 447
+KTG + V L++MY KCG +E S VF
Sbjct: 582 IKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDAR 641
Query: 448 ----EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+M R ++SWT++I+ + AL LF DML G++PNQ+T L+AC N G
Sbjct: 642 VVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLG 701
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
+ + ++ K D ++ LI M+ + G E+ F ++M E + +
Sbjct: 702 AIKLGEQFHALI-----FKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLIT 754
Query: 560 WSVFIAGCRRHG 571
W+ + GC ++G
Sbjct: 755 WNAVLVGCAQNG 766
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 161/329 (48%), Gaps = 38/329 (11%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL +L E G SS+ S L C N + +IH+ +KTG + +VM L
Sbjct: 537 REALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGL 596
Query: 116 VNVYGKCGNMEE-------------------------------AQKVFDNLPRINVVSWT 144
+++Y KCGN+E+ A+ VF+ +P+ +VVSWT
Sbjct: 597 ISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWT 656
Query: 145 SLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
++IS YVQ E+A+ +FLDML G P +T+ + L+AC +L +I+LG+Q HA + K
Sbjct: 657 AIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKL 716
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+ VGNSL ++Y CG F + E ++++W V+ C +NG + ++ F
Sbjct: 717 GFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIF 775
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+M EGI P++ + + C + G A +S+ K G + ++ L +
Sbjct: 776 EQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGR 835
Query: 324 CGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
G + EA+ L + M + V W A++
Sbjct: 836 AGYLSEAEALIENMPVKPDSVIWEALLGA 864
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 132/584 (22%), Positives = 254/584 (43%), Gaps = 72/584 (12%)
Query: 28 LKDKNHTVSYQRSGSKLIQLNGNSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVN 86
++ K+ + + + L Q N + + LG +EA V E + S+ S++
Sbjct: 155 IRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQ 214
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
+ A ++ V ++ T L+ Y K G +EEA++VF+++ NVVSW ++
Sbjct: 215 NGKVDEARLLFDAFVG----KNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAM 270
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
ISGYVQN + A +F +M
Sbjct: 271 ISGYVQNGDLKNARKLFDEM---------------------------------------P 291
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
E + + NS+ + Y C ++ A + F+++ E+N +SW +I + + F K
Sbjct: 292 EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVK 351
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M +P++ + S + L + + + IK GY ++ V ++I+ Y + G
Sbjct: 352 MCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGS 411
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+D A F+ M N +W MIA AQ L DD A+ ++ ++ +
Sbjct: 412 LDLAMHFFETMPERNEYSWTTMIAAFAQCGRL--DD---------AIQLYERVPEQTVA- 459
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
T ++++T +++ +++ I L +VV A++ Y + G ++ A +F
Sbjct: 460 ---TKTAMMTAYAQVGRIQKARLIFDEILN----PNVVAWNAIIAGYTQNGMLKEAKDLF 512
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+M + SW +MI GF + S +AL+L ++ +G P+ +F AL+AC+N G V
Sbjct: 513 QKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDV- 571
Query: 507 EALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
+G + K + Y+ LI M+ + G +E+ + + + + V W+ I
Sbjct: 572 -EIGRV-IHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVK-DTVSWNSLI 628
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+G + ++ E++ K +D S+ ++ +V AG E
Sbjct: 629 SGLSENYMLDDARVVFEKMPK---RDVVSWTAIISAYVQAGHGE 669
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 139/293 (47%), Gaps = 36/293 (12%)
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNS 381
+ G V+EA+++F+ M ++V+WN+MI G++Q NG EA +F
Sbjct: 183 RLGRVEEARRVFNEMIQRDVVSWNSMINGYSQ------------NGKVDEARLLFDAFVG 230
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
++ T++ +LT ++ +E+ ++ ++T + +VV A+++ Y + G ++
Sbjct: 231 KNIR----TWTILLTGYAKEGRIEEAREVFESMTER-----NVVSWNAMISGYVQNGDLK 281
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A ++F EM + + SW S++TG+ + +A +LF+ M N V+++ ++
Sbjct: 282 NARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM----PERNSVSWMVMISGYV 337
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE---EAFDFIKKMDFEPNE 557
+ +EA F M + +P ++ ++ L +E K +E +
Sbjct: 338 HISDYWEAWDVFVKMCRTVA-RPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDV 396
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE-SYAMLLDIFVSAGRWED 609
V+ S + R+G+++L + E + P+ E S+ ++ F GR +D
Sbjct: 397 VVGSAILNAYTRNGSLDLAMHFFETM----PERNEYSWTTMIAAFAQCGRLDD 445
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 350/630 (55%), Gaps = 25/630 (3%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NV SW S+I+ + A+ F + + G PT + + +CS+L + G+ H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ E D V ++L +YS CG L A F+ I +NV+SWT++I +N +A
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225
Query: 259 QGLRFFSKMLSE--------GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
L F L E + + + S+ S C + + VH +K G+ +
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V N++M Y KCG ++K+FD M + ++WN+MIA +AQ S +G
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ---------SGLSG-- 1334
Query: 371 EALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL +F + G++ + T S++L C+ AL G+ IH +K +V VGT++
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 1394
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCGR+E A + F M + + SWT+M+ G+ H + +AL +F M+ AGV+PN
Sbjct: 1395 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 1454
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TFV LAACS+AG+V E +F M+ +Y I+P ++HY C++D+F R GC+ EA++ IK
Sbjct: 1455 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 1514
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
+M +P+ V+W + CR H N++LG AA++L +L P +C Y +L +++ AGRW D
Sbjct: 1515 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 1574
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V ++ L + +L + +S + +K +V+ F D HP I+K L++L + + GY
Sbjct: 1575 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 1634
Query: 670 KQQESFEL--TDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
+ L DEE + HSEKLA+AFG++N+ + I ++K+ +C DCH IK+
Sbjct: 1635 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 1694
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ L R+ +VRDSKR H F +G C+C D+
Sbjct: 1695 ISKLVHRDFVVRDSKRFHHFKDGVCSCGDY 1724
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 208/411 (50%), Gaps = 24/411 (5%)
Query: 165 DMLEAGNYPT----NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
D+ + N P N+ AL + ++ + +QIHA +++ +D + L LY
Sbjct: 10 DVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLY 69
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
ST G + AI F +I+ +W +I A NG + Q L + M+ +GI ++FT
Sbjct: 70 STHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFP 129
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
+ C LS+ +G VH IK G++ ++ V+N+++ Y KCG A K+F+ M
Sbjct: 130 FVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR 189
Query: 341 NLVTWNAMIAGHAQMMDLAK-----DDLSAHN---------------GGTEALSIFSKLN 380
N+V+W +I+G DL + D++ + N EAL +F ++
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+ + P+ YT S++ C+ + L G IH +K V +GTAL++MY KCG I+
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF M ++L +W SMIT H L +AL LF +M V+P+ +TF+G L AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
+ V E YF M + Y I P+ +HY C+ +++ R ++EAF K++
Sbjct: 370 HIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 232/466 (49%), Gaps = 34/466 (7%)
Query: 14 LETKSRQP---SSSLAT----LKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVL 66
+ R+P SS+LAT DK++ S+ + L + + E +R+ L ++
Sbjct: 1080 FPSSRRRPVSLSSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLI 1139
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
SS+ ++ C L + + H G D FV + L+++Y KCG ++
Sbjct: 1140 P-----TRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLK 1194
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE-------AGNYPTN-VTL 178
+A+ +FD +P NVVSWTS+I+GYVQN Q + A+ +F D LE N P + V +
Sbjct: 1195 DARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVM 1254
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L+ACS + + + +H +VVK + VGN+L Y+ CG + K F+ + E
Sbjct: 1255 VSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE 1314
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQ 297
K+ +SW ++I ++G + + L F M+ G++ N TL+++ C +LR G
Sbjct: 1315 KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC 1374
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H IK+ N+ V SI+ +Y KCG V+ A+K FD M N+ +W AM+AG+
Sbjct: 1375 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGM--- 1431
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLK 416
H EAL IF K+ +G+KP+ TF S+L CS +E+G +A+ K
Sbjct: 1432 --------HGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHK 1483
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMI 461
+ +V+++ + G + A + M + + W S++
Sbjct: 1484 YDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 1529
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 172/373 (46%), Gaps = 45/373 (12%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
LT ++ + LLQ C N K L IHA I+++G D + L+++Y G +
Sbjct: 19 LTPRGNIRAKKALFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRI 75
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A +F + +W +I N E A+ ++ +M+ G T + AC
Sbjct: 76 AYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKAC 135
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ SI LGK +H ++KY D V N+L Y CG A+K F ++R +NV+SWT
Sbjct: 136 TNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWT 195
Query: 246 TVIG---ACGE----------------------------NGEAVQGLRFFSKMLSEGIQP 274
TVI +CG+ N + + L F +M +E I P
Sbjct: 196 TVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP 255
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
NE+T+ S+ C M L +G +H IK + + +++ +Y KCG + +A ++F
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVF 315
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ M +L TWN+MI L H G EAL++FS++ +KPD TF +
Sbjct: 316 ETMPRKSLPTWNSMIT-----------SLGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364
Query: 395 LTICSRLVALEQG 407
L C + +++G
Sbjct: 365 LCACVHIKNVKEG 377
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 32/301 (10%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+++ +G ++ +++ C N S+ +++H ++K G D FV L++ Y KCG
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174
Query: 124 -------------------------------NMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+++EA+++FD +P NVVSWT++I+GY++
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N QPE A+ +F M +P T+ + + AC+ + + LG+ IH Y +K E +
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYL 294
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
G +L +YS CGS+ AI+ F + K++ +W ++I + G +G + L FS+M +
Sbjct: 295 GTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354
Query: 273 QPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ T + C + +++ G A + G A + LY + +DEA
Sbjct: 355 KPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Query: 332 K 332
K
Sbjct: 415 K 415
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/714 (31%), Positives = 381/714 (53%), Gaps = 51/714 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL+ ++ KS S A+ +HA ++K + ++ L+++Y + ++ ++F+ +
Sbjct: 11 ALLRNPLSIKSRSQAQQLHAQVLKFQA-SSLCNLSLLLSIYSHINLLHDSLRLFNTIHFP 69
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++W S+I Y + P ++ F+ ML +G YP + + L +C+ L + LG+ +H
Sbjct: 70 PALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLH 129
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSL-------------------------------- 226
Y+++ + D GN+L ++YS L
Sbjct: 130 GYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE 189
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+S K F + EK+++SW T+I NG + LR +M ++P+ FTL+S+ +
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ + G ++H I+ G +++ V +S++ +Y KC V ++ ++F ++ + ++WN
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309
Query: 347 AMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
++IAG Q NG E L F ++ + +KP Y+FSSI+ C+ L L
Sbjct: 310 SIIAGCVQ------------NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+H + GF ++ + ++LV+MY KCG I A ++F M R ++SWT+MI G A
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H + A++LFE M G++PN V F+ L ACS+ G+V EA YF M +++ I P +
Sbjct: 418 LHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 477
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY + D+ R G +EEA+DFI M P IW+ ++ CR H N+++ A ++L+
Sbjct: 478 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILE 537
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
+ P + +Y +L +I+ +A RW++ A + R + +T SWI +K+KVY+F D
Sbjct: 538 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNT 700
HP +I + ++ LVE + GY S D EE Y HSE+LAI FG++NT
Sbjct: 598 SHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 657
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P I V K+ +C DCH K I+ + REI+VRD+ R H F NG C+C D+
Sbjct: 658 PAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDY 711
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 206/423 (48%), Gaps = 46/423 (10%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P +SLG + +L G + + S+L+ C L+ E +H +I++ G D +
Sbjct: 87 PHQSLG--SFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTG 144
Query: 113 TFLVNVYGKCGNMEEA--------------------------------QKVFDNLPRINV 140
L+N+Y K +EE+ +K+F+ +P ++
Sbjct: 145 NALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDL 204
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSW ++I+G +N E + + +M A P + TL + L + I GK+IH
Sbjct: 205 VSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGC 264
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
++ + D V +SL +Y+ C + + + F + E++ +SW ++I C +NG +G
Sbjct: 265 SIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEG 324
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
LRFF +ML I+P ++ +SI C + +L +G Q+H + G+ N+ + +S++ +
Sbjct: 325 LRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 384
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG + A+++FD M ++V+W AMI G A H +A+ +F ++
Sbjct: 385 YAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA-----------LHGQAPDAIELFEQME 433
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ G+KP+ F ++LT CS +++ + +++T G V A+ ++ + GR+
Sbjct: 434 TEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRL 493
Query: 440 ERA 442
E A
Sbjct: 494 EEA 496
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 150/285 (52%), Gaps = 7/285 (2%)
Query: 59 FQEALSVLTE--GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++E L ++ E G ++ S+ S+L +S + IH ++ G D +V +
Sbjct: 220 YEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASS 279
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KC + ++ +VF L + +SW S+I+G VQN + + F ML A P
Sbjct: 280 LIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPK 339
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ + + + AC+ L ++ LGKQ+H Y+ + +++ + +SL +Y+ CG++ +A + F+
Sbjct: 340 SYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFD 399
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC--GTMLSL 292
R+R ++++SWT +I C +G+A + F +M +EGI+PN ++ + C G ++
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVD- 458
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+S+ G A + ++ L + G ++EA GM
Sbjct: 459 EAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGM 503
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/673 (32%), Positives = 368/673 (54%), Gaps = 17/673 (2%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
K L + IHA I+ +G + F+ L+N Y CG + +A+++F + P NVVSWT LI
Sbjct: 35 KDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILI 94
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
SG +N AI VF +M+ P VT+ + L A ++L IR+ K +H + V+ E
Sbjct: 95 SGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFE 154
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
+ V +L +YS G + A + F + E+NV++W ++ ++G + + + F+ M
Sbjct: 155 GNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLM 214
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+G+ + +T+ S+ ++ L+VG +H I+ GY ++ ++ ++M +Y+ V
Sbjct: 215 RRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCV 274
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK-LNSSGMKP 386
D+A ++F MS ++ W M+ G S+ A+ F+K L +K
Sbjct: 275 DDAHRVFSEMSVKDVAAWTLMLTG-----------FSSGRHWDRAIKHFNKMLGIQNLKL 323
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D IL+ CS AL+QG ++HAL +KT F +++ VG+A+++MY CG +E A R F
Sbjct: 324 DSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFF 383
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
M + ++ W +MI G + A+ LF M +G+ P++ TFV L ACS+AGMVY
Sbjct: 384 YGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVY 443
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E L F M K + P + HY C+ID+ R G ++ A+ FI M F+P+ ++S +
Sbjct: 444 EGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGA 503
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR HGN++LG ++++ +++P D Y +L +++ AG WE V + + R +++ +
Sbjct: 504 CRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDP 563
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EE 681
+S I I ++Y+F + HPQ +I +L L+ K K GY + L D ++
Sbjct: 564 GFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLLQDVSDDMKK 623
Query: 682 SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
+HSEK+AIAFGL+ T + I + K+ C DCH K ++ + R ++++D+ R
Sbjct: 624 DILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASKFVSKVFGRVLVIKDANRF 683
Query: 742 HKFVNGHCTCRDF 754
H F +G C+CRD+
Sbjct: 684 HVFQDGVCSCRDY 696
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/401 (28%), Positives = 208/401 (51%), Gaps = 17/401 (4%)
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L+ ++ +QIHA ++ +T + NSL + Y CG L A + F+ KNV+SWT +
Sbjct: 34 LKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTIL 93
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +N V+ + F +M+ +PN T++S+ + +R+ VH ++ G+
Sbjct: 94 ISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGF 153
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N+ V +++ +Y K G + A++LF+ MS N+VTWNA+++G+ S H
Sbjct: 154 EGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGY-----------SDHG 202
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ +F+ + G+ D YT S++ + L+ G IH ++TG+ +D + T
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML-LAGVR 486
AL+++Y ++ A RVF EMS + + +WT M+TGF++ +A++ F ML + ++
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
+ + +G L++CS++G + + + K + +IDM+ G +E+A
Sbjct: 323 LDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVG-SAVIDMYANCGNLEDAKR 381
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
F M E + V W+ IAG +G G A + L++K
Sbjct: 382 FFYGMG-EKDVVCWNAMIAGNGMNG---YGTDAIDLFLQMK 418
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 233/468 (49%), Gaps = 31/468 (6%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTE------GPKVQTSSYV 78
LA K H Y+ S I ++G + ++ F EA+ V E P T S
Sbjct: 72 LADAKQIFHHTPYKNVVSWTILISGLA---KNDCFVEAIDVFREMIMGNFKPNAVTIS-- 126
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L N + A+ +H V+ G + FV T LV++Y K G M A+++F+++
Sbjct: 127 SVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER 186
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV+W +++SGY + E AI +F M G T+ + + A S+ +++G IH
Sbjct: 187 NVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIH 246
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++++ E+D + +L +Y + ++ A + F+ + K+V +WT ++
Sbjct: 247 GFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWD 306
Query: 259 QGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ ++ F+KML + ++ + L I S C +L+ G +VH+L IK +A+N+ V +++
Sbjct: 307 RAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAV 366
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIF 376
+ +Y CG +++A++ F GM ++V WNAMIAG+ NG GT+A+ +F
Sbjct: 367 IDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGM------------NGYGTDAIDLF 414
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKK 435
++ SG+ PD TF S+L CS + +G QI +KT + ++ ++++ +
Sbjct: 415 LQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGR 474
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITG----FANHSLSHQALQ-LFE 478
G+++ A M + S + G N L H+ Q +FE
Sbjct: 475 AGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE 522
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 153/307 (49%), Gaps = 30/307 (9%)
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
++ LS QP+ +S+ + L+ Q+H+ I G N + NS+M Y+ C
Sbjct: 17 TQRLSPLAQPH-------ASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYC 69
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
GL+ +A+++F + N+V+W +I+G LAK+D EA+ +F ++
Sbjct: 70 GLLADAKQIFHHTPYKNVVSWTILISG------LAKNDCF-----VEAIDVFREMIMGNF 118
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
KP+ T SS+L + L + + +H ++ GF +V V TALV+MY K G + A +
Sbjct: 119 KPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQ 178
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
+F MS R +++W ++++G+++H S +A+ LF M G+ + T + + A + G
Sbjct: 179 LFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGC 238
Query: 505 VYEALGYFEMM-----QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
+ G + + + IK L+D++V C+++A +M + +
Sbjct: 239 LQVGTGIHGFIIRTGYENDKHIKTA------LMDIYVSHNCVDDAHRVFSEMSVK-DVAA 291
Query: 560 WSVFIAG 566
W++ + G
Sbjct: 292 WTLMLTG 298
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 4/180 (2%)
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+I +L L+ +QIHA + +G + + +L+N Y CG + A ++F + ++
Sbjct: 29 SILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVV 88
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEM 514
SWT +I+G A + +A+ +F +M++ +PN VT L A +N G++ A +
Sbjct: 89 SWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFW 148
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
++ ++ ++ L+DM+ + GC+ A + M E N V W+ ++G HG E
Sbjct: 149 VRGGFEGNVFVE--TALVDMYSKFGCMGVARQLFESMS-ERNVVTWNAIVSGYSDHGFSE 205
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 233/733 (31%), Positives = 379/733 (51%), Gaps = 77/733 (10%)
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
+ C +L+ +HAH+ TG H+ T L+ Y + G E +++VFD P+ +
Sbjct: 356 KRCATSTTLTQ---LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSF 412
Query: 142 SWTSLISGYV---------------------------------------------QNSQP 156
W LI YV +N Q
Sbjct: 413 MWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQA 472
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK--------QIHAYVVKYQTED 208
+ +F M+ P +VT+ + ACS L S+RLG+ +H +V++ +
Sbjct: 473 SEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDP 532
Query: 209 DTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
+ +G +L LY+ G+L K F I+EK ++SW T+I NG+ + L F +M
Sbjct: 533 ELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQM 592
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
++G+ P+ ++L S S CGT+ ++GAQ+H IK G ++ V+N+++ +Y KCG V
Sbjct: 593 QTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKCGFV 651
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKP 386
A K+F+ + +LVTWN+MI G +Q NG EA+++F ++ + +K
Sbjct: 652 HSANKMFEKIKEKSLVTWNSMICGFSQ------------NGYSVEAITLFDQMYMNCVKM 699
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D TF S++ CS L LE+G+ +H + G D + TAL +MY KCG ++ A VF
Sbjct: 700 DKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVF 759
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
MS R+++SW+ MI G+ H + + LF ML +G++PN +TF+ L+ACS+AG V
Sbjct: 760 DRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVE 819
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E YF M E+ ++P DH+ C++D+ R G + A+ I + F N IW + G
Sbjct: 820 EGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNG 878
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR H +++ + LL + D Y +L +I+ G W+ V+++ + + L +
Sbjct: 879 CRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVP 938
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL--VEKAKCFGYKQQESFELT---DEE 681
+S I I K+Y F P D H Q+ +I++ L+ + A+ + + S T ++E
Sbjct: 939 GYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKE 998
Query: 682 SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
+ V HSEKLAIAFG++NT + + + K+ +CRDCH+F KI + +T REII+RD R
Sbjct: 999 NNVVSHSEKLAIAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRF 1058
Query: 742 HKFVNGHCTCRDF 754
H F NG C+C D+
Sbjct: 1059 HCFRNGSCSCNDY 1071
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 1/182 (0%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K+ +++S++Q C + L + +H ++ G +D ++ T L ++Y KCG ++ A
Sbjct: 698 KMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHG 757
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD + ++VSW+ +I+GY + Q I +F ML +G P ++T L+ACS +
Sbjct: 758 VFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGA 817
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIG 249
+ GK + ++ E + L S G LN A + + N W ++
Sbjct: 818 VEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLN 877
Query: 250 AC 251
C
Sbjct: 878 GC 879
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/771 (32%), Positives = 391/771 (50%), Gaps = 109/771 (14%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +HAHI+ +G + F++ L+N+Y K N+ A+K+FD +P+ ++V+ T+L+S Y
Sbjct: 24 ARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSS 83
Query: 153 NSQPELA---------------------------------IHVFLDMLEAGNYPTNVTLG 179
+ +LA +++F+ M G P T
Sbjct: 84 SGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFS 143
Query: 180 TALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS---------LNSA 229
+ L+A S + + R + +H V+K T SV N+L S Y C S + SA
Sbjct: 144 SVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASA 203
Query: 230 IKAFNRIREKNVM--SWTTVIGACGENG------EAVQGLRF------------------ 263
K F+ + + SWTT+I N E + GL +
Sbjct: 204 RKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGL 263
Query: 264 -------FSKMLSEGIQPNEFTLTSISSVCGT----MLSLRVGAQVHSLGIKLGYASN-- 310
F +M S GIQ +E+T TS+ S CG+ M G QVH ++ +
Sbjct: 264 YEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHH 323
Query: 311 --LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH--AQMMDLAKDDLS-- 364
L V N+++ Y K + EA+++FD M ++++WNA+++G+ AQ ++ A S
Sbjct: 324 FVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEM 383
Query: 365 ---------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
A NG G E L +F+++ S G++P Y F+ +T CS L +L+ G+
Sbjct: 384 PERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQ 443
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
QIH+ ++ G S + G AL+ MY +CG +E A VF+ M +SW +MI A H
Sbjct: 444 QIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHG 503
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+A++LFE M+ + P+++TF+ L AC++AG++ E YF+ M Y I P DHY
Sbjct: 504 HGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHY 563
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
LID+ R G +A IK M FE IW +AGCR HGNMELG AA++LL+L P
Sbjct: 564 ARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIP 623
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+Y +L +++ + G+W++VA V+ L RE + + SW+ +++ V+ F +D HP
Sbjct: 624 GQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHP 683
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTDEES-----ASVYHSEKLAIAFGLLNTPIV 703
+ ++ L +LV + K GY F L D ES + HSEKLA+ +G++ P+
Sbjct: 684 EVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLG 743
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I V K+ +C DCHN K I+ + REI+VRD KR H F NG C+C ++
Sbjct: 744 ATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNY 794
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 82/327 (25%)
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
LT ++ V T + R VH+ + G+ N + N ++ +Y K + A+KLFD +
Sbjct: 11 LTQLNHVSTTQIIARA---VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIP 67
Query: 339 HVNLVTWNAMIAGH--------AQMMDLA-----KDDLSAH---------NGGTEALSIF 376
++V +++ + AQ + A +D +S + N G AL++F
Sbjct: 68 KPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLF 127
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG--EQIHALTLKTGFLSDVVVGTALVNMYK 434
++ G PD +TFSS+L+ S L+A E+ + +H +K G L V AL++ Y
Sbjct: 128 VQMKRYGFLPDPFTFSSVLSALS-LIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYV 186
Query: 435 KCGR---------IERASRVFVEMSTRTLI--SWTSMITGFANHSLSHQALQLFEDMLLA 483
C + A +VF E + SWT+MI G+ + A +L +
Sbjct: 187 CCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLD----- 241
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+ Y P+ + +I +VR G EE
Sbjct: 242 -------------------GLTY----------------PIDVAWNAMISGYVRRGLYEE 266
Query: 544 AFDFIKKMD---FEPNEVIWSVFIAGC 567
AFD ++M + +E ++ I+ C
Sbjct: 267 AFDTFRRMHSMGIQEDEYTYTSLISAC 293
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 232/667 (34%), Positives = 360/667 (53%), Gaps = 53/667 (7%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF + N + W +++ GY +S P A+ +++ M+ G P + T L +C+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR------------ 235
++ G+QIH +V+K E D V SL S+Y+ G L A K F+R
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 236 -------------------IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
I K+V+SW +I E G + L F +M+ ++P+E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ ++ S C S+ +G QVHS G+ SNL++ N+++ LY KCG V+ A LF+G
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+S ++V+WN +I G+ M N EAL +F ++ SG P+ T SIL
Sbjct: 259 LSCKDVVSWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGESPNDVTIVSILP 307
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVV----VGTALVNMYKKCGRIERASRVFVEMSTR 452
C+ L A++ G IH K L DV + T+L++MY KCG IE A +VF M +
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKK--LKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHK 365
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+L SW +MI GFA H ++ LF M G+ P+ +TFVG L+ACS++G + F
Sbjct: 366 SLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIF 425
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ M ++Y I P ++HY C+ID+ G +EA + IK M EP+ VIW + CRRHGN
Sbjct: 426 KSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGN 485
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+EL A L+K++P++ SY +L +I+ +AG W++VA V+ L + + + S I
Sbjct: 486 LELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIE 545
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYH 687
I +V+ F D LHP++ EI+ +L+E+ + G+ S L + +E A +H
Sbjct: 546 IDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHH 605
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLAIAFGL++T + + +VK+ +CR+CH K+++ + REII RD R H F +G
Sbjct: 606 SEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDG 665
Query: 748 HCTCRDF 754
C+C DF
Sbjct: 666 VCSCNDF 672
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 192/394 (48%), Gaps = 46/394 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S+PV +L + L P T + LL+ C K+ + IH H++K G D
Sbjct: 44 SSDPVSALKLYVVMISLGLLPNSYTFPF--LLKSCAKSKAFEEGQQIHGHVLKLGYEPDL 101
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL----------------------- 146
+V T L+++Y + G +E+A KVFD +VVS+T+L
Sbjct: 102 YVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVK 161
Query: 147 --------ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
ISGY + + A+ +F +M++ P T+ T L+AC+ S+ LG+Q+H
Sbjct: 162 DVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVH 221
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L LYS CG + +A F + K+V+SW T+IG
Sbjct: 222 SWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYK 281
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH-SLGIKLGYASNL-RVRNS 316
+ L F +ML G PN+ T+ SI C + ++ +G +H + KL +N +R S
Sbjct: 282 EALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTS 341
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG ++ A ++F+ M H +L +WNAMI G A H +F
Sbjct: 342 LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM-----------HGRANAGFDLF 390
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
S++ +G++PD TF +L+ CS L+ G I
Sbjct: 391 SRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHI 424
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/672 (32%), Positives = 373/672 (55%), Gaps = 26/672 (3%)
Query: 96 IHAHIVK----TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR--INVVSWTSLISG 149
+HA ++K TGS + F + L + A +F PR ++ + L+
Sbjct: 35 LHAALIKSGELTGSAKSFH--SLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRA 92
Query: 150 YVQNSQPELAIHVFLDMLEAGNY-PTNV-TLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
++ PE A+H+F++ML A + P + T AL +CS + ++ +G+ + AY VK
Sbjct: 93 FLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLV 152
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D V +SL +Y++CG + +A F+ E V+ W ++ A +NG+ ++ + F M
Sbjct: 153 ADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGM 212
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
L G+ +E TL S+ + CG + ++G V + G A N ++ ++M +Y KCG +
Sbjct: 213 LEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEI 272
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+A++LFDGM ++V W+AMI+G+ Q + EAL +FS++ + ++P+
Sbjct: 273 GKARRLFDGMQSRDVVAWSAMISGYTQA-----------DQCREALGLFSEMQLARVEPN 321
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T S+L+ C+ L ALE G+ +H+ + ++GTALV+ Y KCG I+ A F
Sbjct: 322 DVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFE 381
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M + +WT++I G A + +AL+LF M AG+ P VTF+G L ACS++ +V E
Sbjct: 382 SMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEE 441
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+F+ M ++Y IKP ++HY C++D+ R G ++EA+ FI+ M EPN VIW ++ C
Sbjct: 442 GRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSC 501
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
H N+ +G A +Q++ L P Y +L +I+ SAG+W+D A+V+ ++ + +T
Sbjct: 502 AVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPG 561
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEES 682
S I + V+ F D HP+ EI++ ++E++ + K GY + E ++E
Sbjct: 562 CSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEV 621
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
+ +HSEKLAIAFGL+ + I + K+ +C DCH+ K+I+ + REI+VRD H
Sbjct: 622 SVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFH 681
Query: 743 KFVNGHCTCRDF 754
F +G C+C D+
Sbjct: 682 HFKDGTCSCNDY 693
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 200/412 (48%), Gaps = 16/412 (3%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F E L + P Q ++ +L + C +L + A+ VK G D FV++ L+++
Sbjct: 106 FIEMLHAASACPADQHTAACAL-KSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHM 164
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y CG++ A+ VFD VV W ++++ Y++N + +F MLE G VTL
Sbjct: 165 YASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTL 224
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ +TAC + +LGK + +V + + + +L +Y+ CG + A + F+ ++
Sbjct: 225 VSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQS 284
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V++W+ +I + + + L FS+M ++PN+ T+ S+ S C + +L G V
Sbjct: 285 RDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWV 344
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HS + + + +++ Y KCG +D+A + F+ M N TW A+I G A
Sbjct: 345 HSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMAT---- 400
Query: 359 AKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLK 416
NG G EAL +FS + +G++P TF +L CS +E+G + ++
Sbjct: 401 --------NGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARD 452
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
G V +V++ + G ++ A + M + W ++++ A H
Sbjct: 453 YGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVH 504
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 12/310 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ VS++ C + + H+ + G ++ ++T L+++Y KCG + +A+++FD +
Sbjct: 223 TLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGM 282
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VV+W+++ISGY Q Q A+ +F +M A P +VT+ + L+AC+ L ++ GK
Sbjct: 283 QSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGK 342
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+H+YV + + T +G +L Y+ CG ++ A++AF + KN +WT +I NG
Sbjct: 343 WVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNG 402
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L FS M GI+P + T + C + G + H + Y RV +
Sbjct: 403 RGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMARDYGIKPRVEH 461
Query: 316 --SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
++ L + GLVDEA + M N V W A+++ A ++ G EA
Sbjct: 462 YGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGI--------GEEA 513
Query: 373 LSIFSKLNSS 382
L LN S
Sbjct: 514 LKQIISLNPS 523
>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
Length = 772
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/687 (35%), Positives = 383/687 (55%), Gaps = 30/687 (4%)
Query: 72 VQTSSYVSLLQE-----CVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVNVYGKCGN 124
V SYV LL + L +H H++ TG DF V LVN+Y KCG+
Sbjct: 26 VSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGS 84
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A++VF + + VSW S+I+G QN A+ + M P + TL ++L++
Sbjct: 85 IADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSS 144
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SL+ +LG+QIH +K + + SV N+L +LY+ G LN K F+ + E + +SW
Sbjct: 145 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 204
Query: 245 TTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
++IGA + ++ + + F L G + N T +S+ S ++ +G Q+H L +
Sbjct: 205 NSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 264
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
K A N+++ Y KCG +D +K+F MS + VTWN+MI+G+ LAK
Sbjct: 265 KYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAK-- 322
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
AL + + +G + D + ++++L+ + + LE+G ++HA +++ SD
Sbjct: 323 ---------ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 373
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
VVVG+ALV+MY KCGR++ A R F M R SW SMI+G+A H +AL+LF +M L
Sbjct: 374 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKL 433
Query: 483 AG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G P+ VTFVG L+ACS+AG++ E +FE M Y + P ++H+ C+ D+ R G +
Sbjct: 434 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGEL 493
Query: 542 EEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLD 599
++ DFI KM +PN +IW +V A CR +G ELG AAE L +L+P++ +Y +L +
Sbjct: 494 DKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 553
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ + GRWED+ + ++ + + +SW+ +KD V+ F D HP + I+K L E
Sbjct: 554 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDTDVIYKKLKE 613
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL-LNTPIVSPILVVKSTT 713
L K + GY Q F L D +E YHSEKLA+AF L PI ++K+
Sbjct: 614 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 673
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKR 740
+C DCH+ K I+ + R+II+RDS R
Sbjct: 674 VCGDCHSAFKYISKIEGRQIILRDSNR 700
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 227/474 (47%), Gaps = 30/474 (6%)
Query: 149 GYVQNSQPELAIHVFLDM--LEAGNYPTNVTLGTALTACSSLESIRL--GKQIHAYVVKY 204
G V+ E A +F+DM + + + V L ++ S E + L G+++H +V+
Sbjct: 3 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEQVGLKKGREVHGHVITT 62
Query: 205 QTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
D +GN L ++Y+ CGS+ A + F + EK+ +SW ++I +NG ++ +
Sbjct: 63 GLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEKDSVSWNSMITGLDQNGCFIEAVER 122
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+ M I P FTL S S C ++ ++G Q+H +KLG N+ V N++M LY +
Sbjct: 123 YQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE 182
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
G ++E +K+F M + V+WN++I A S+ EA++ F +G
Sbjct: 183 TGYLNECRKIFSSMPEHDQVSWNSIIGALA----------SSERSLPEAVACFLNALRAG 232
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
K + TFSS+L+ S L E G+QIH L LK + AL+ Y KCG ++
Sbjct: 233 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCE 292
Query: 444 RVFVEMST-RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
++F MS R ++W SMI+G+ ++ L +AL L ML G R + + L+A ++
Sbjct: 293 KIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 352
Query: 503 -----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
GM A ++ + + L+DM+ + G ++ A F M N
Sbjct: 353 ATLERGMEVHACSVRACLESDVVVGSA------LVDMYSKCGRLDYALRFFNTMPVR-NS 405
Query: 558 VIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
W+ I+G RHG E L +A +L P D ++ +L AG E+
Sbjct: 406 YSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEE 459
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ + Y ++L + +L +HA V+ D V + LV++Y KCG
Sbjct: 330 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 389
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALT 183
++ A + F+ +P N SW S+ISGY ++ Q E A+ +F +M L+ P +VT L+
Sbjct: 390 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLS 449
Query: 184 ACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NV 241
ACS + G K + Y + + L G L+ +++ K NV
Sbjct: 450 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNV 509
Query: 242 MSWTTVIGAC 251
+ W TV+GAC
Sbjct: 510 LIWRTVLGAC 519
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/686 (33%), Positives = 366/686 (53%), Gaps = 22/686 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
S L+ V +S +HAHI++T + F+ LVN+Y K AQ V
Sbjct: 12 SFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNP 71
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
VV+WTSLISG V N + A+ F +M P + T A +SL GKQ+
Sbjct: 72 RTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQL 131
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA +K D VG S +YS G A F+ + +N+ +W + ++G
Sbjct: 132 HALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRC 191
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ + F K L +PN T + + C ++SL +G Q+H ++ Y ++ V N +
Sbjct: 192 LDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGL 251
Query: 318 MYLYLKCGLVDEAQKLFD--GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+ Y KCG + ++ +F G N+V+W +++A Q + + A +
Sbjct: 252 IDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEER-----------ACMV 300
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F + ++P + SS+L+ C+ L LE G +HAL LK ++ VG+ALV++Y K
Sbjct: 301 FLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGK 359
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA--GVRPNQVTFV 493
CG IE A +VF EM R L++W +MI G+A+ AL LF++M G+ + VT V
Sbjct: 360 CGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLV 419
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L+ACS AG V L FE M+ Y I+P +HY C++D+ R G ++ A++FIK+M
Sbjct: 420 SVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPI 479
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P +W + C+ HG +LG AAE+L +L P D ++ + ++ SAGRWE+ +V
Sbjct: 480 LPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIV 539
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ R+ + + +SW+ +K++V+ F+ D H +++EI +L +L + K GY
Sbjct: 540 RKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDA 599
Query: 674 S---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
+ F+L +EE AS YHSEK+A+AFGL+ P PI + K+ +C DCH+ IK I+ +
Sbjct: 600 NLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPIRITKNLRICIDCHSAIKFISKI 659
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD+ R H+F +G C+C+D+
Sbjct: 660 VGREIIVRDNNRFHRFKDGWCSCKDY 685
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 203/443 (45%), Gaps = 30/443 (6%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P N+ LG+ L + S LG+ +HA++++ + T + + N L ++YS NSA
Sbjct: 6 PPNL-LGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQL 64
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
+ + V++WT++I C N L FS M E + PN+FT + ++
Sbjct: 65 VLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHM 124
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
G Q+H+L +K G ++ V S +Y K GL EA+ +FD M H NL TWNA ++
Sbjct: 125 PVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSN 184
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
Q +A++ F K +P+ TF + L C+ +V+LE G Q+H
Sbjct: 185 AVQ-----------DGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLH 233
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST--RTLISWTSMITGFANHSL 469
+++ + DV V L++ Y KCG I + VF + + R ++SW S++ +
Sbjct: 234 GFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHE 293
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY--KIKPVMDH 527
+A +F V P L+AC+ LG E+ + + +K ++
Sbjct: 294 EERACMVFLQA-RKEVEPTDFMISSVLSACAE-------LGGLELGRSVHALALKACVEE 345
Query: 528 YM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+ L+D++ + G IE A ++M E N V W+ I G G++++ +++
Sbjct: 346 NIFVGSALVDLYGKCGSIEYAEQVFREMP-ERNLVTWNAMIGGYAHLGDVDMALSLFQEM 404
Query: 584 LKLKPKDCESYAMLLDIFVSAGR 606
SY L+ + + R
Sbjct: 405 TSGSCGIALSYVTLVSVLSACSR 427
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 143/282 (50%), Gaps = 7/282 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ + L C + SL +H IV++ +D V L++ YGKCG++ ++ VF +
Sbjct: 212 TFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRI 271
Query: 136 --PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
R NVVSW SL++ VQN + E A VFL + PT+ + + L+AC+ L + L
Sbjct: 272 GSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVE-PTDFMISSVLSACAELGGLEL 330
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+ +HA +K E++ VG++L LY CGS+ A + F + E+N+++W +IG
Sbjct: 331 GRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAH 390
Query: 254 NGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYASN 310
G+ L F +M S GI + TL S+ S C ++ G Q+ S+ + G
Sbjct: 391 LGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPG 450
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT-WNAMIAG 351
++ L + GLVD A + M + ++ W A++
Sbjct: 451 AEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGA 492
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 350/630 (55%), Gaps = 25/630 (3%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NV SW S+I+ + A+ F + + G PT + + +CS+L + G+ H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ E D V ++L +YS CG L A F+ I +NV+SWT++I +N +A
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098
Query: 259 QGLRFFSKMLSE--------GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
L F L E + + + S+ S C + + VH +K G+ +
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V N++M Y KCG ++K+FD M + ++WN+MIA +AQ S +G
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQ---------SGLSG-- 2207
Query: 371 EALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL +F + G++ + T S++L C+ AL G+ IH +K +V VGT++
Sbjct: 2208 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 2267
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCGR+E A + F M + + SWT+M+ G+ H + +AL +F M+ AGV+PN
Sbjct: 2268 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 2327
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TFV LAACS+AG+V E +F M+ +Y I+P ++HY C++D+F R GC+ EA++ IK
Sbjct: 2328 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 2387
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
+M +P+ V+W + CR H N++LG AA++L +L P +C Y +L +++ AGRW D
Sbjct: 2388 RMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWAD 2447
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V ++ L + +L + +S + +K +V+ F D HP I+K L++L + + GY
Sbjct: 2448 VERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGY 2507
Query: 670 KQQESFEL--TDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
+ L DEE + HSEKLA+AFG++N+ + I ++K+ +C DCH IK+
Sbjct: 2508 VPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTVIKL 2567
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ L R+ +VRDSKR H F +G C+C D+
Sbjct: 2568 ISKLVHRDFVVRDSKRFHHFKDGVCSCGDY 2597
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 208/411 (50%), Gaps = 24/411 (5%)
Query: 165 DMLEAGNYPT----NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
D+ + N P N+ AL + ++ + +QIHA +++ +D + L LY
Sbjct: 10 DVFPSKNIPLTPRGNIRAKKALFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLY 69
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
ST G + AI F +I+ +W +I A NG + Q L + M+ +GI ++FT
Sbjct: 70 STHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFP 129
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
+ C LS+ +G VH IK G++ ++ V+N+++ Y KCG A K+F+ M
Sbjct: 130 FVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVR 189
Query: 341 NLVTWNAMIAGHAQMMDLAK-----DDLSAHN---------------GGTEALSIFSKLN 380
N+V+W +I+G DL + D++ + N EAL +F ++
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+ + P+ YT S++ C+ + L G IH +K V +GTAL++MY KCG I+
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK 309
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF M ++L +W SMIT H L +AL LF +M V+P+ +TF+G L AC
Sbjct: 310 DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACV 369
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
+ V E YF M + Y I P+ +HY C+ +++ R ++EAF K++
Sbjct: 370 HIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 229/458 (50%), Gaps = 31/458 (6%)
Query: 19 RQPSSSLAT----LKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQT 74
R+ S+LAT DK++ S+ + L + + E +R+ L ++
Sbjct: 1961 REDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIP-----TR 2015
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
SS+ ++ C L + + H G D FV + L+++Y KCG +++A+ +FD
Sbjct: 2016 SSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDE 2075
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE-------AGNYPTN-VTLGTALTACS 186
+P NVVSWTS+I+GYVQN Q + A+ +F D LE N P + V + + L+ACS
Sbjct: 2076 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ + + +H +VVK + VGN+L Y+ CG + K F+ + EK+ +SW +
Sbjct: 2136 RVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNS 2195
Query: 247 VIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I ++G + + L F M+ G++ N TL+++ C +LR G +H IK+
Sbjct: 2196 MIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKM 2255
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
N+ V SI+ +Y KCG V+ A+K FD M N+ +W AM+AG+
Sbjct: 2256 DLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGM----------- 2304
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVV 424
H EAL IF K+ +G+KP+ TF S+L CS +E+G +A+ K +
Sbjct: 2305 HGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIE 2364
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMI 461
+V+++ + G + A + M + + W S++
Sbjct: 2365 HYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLL 2402
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 172/373 (46%), Gaps = 45/373 (12%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
LT ++ + LLQ C N K L IHA I+++G D + L+++Y G +
Sbjct: 19 LTPRGNIRAKKALFLLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRI 75
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A +F + +W +I N E A+ ++ +M+ G T + AC
Sbjct: 76 AYAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKAC 135
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ SI LGK +H ++KY D V N+L Y CG A+K F ++R +NV+SWT
Sbjct: 136 TNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWT 195
Query: 246 TVIG---ACGE----------------------------NGEAVQGLRFFSKMLSEGIQP 274
TVI +CG+ N + + L F +M +E I P
Sbjct: 196 TVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFP 255
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
NE+T+ S+ C M L +G +H IK + + +++ +Y KCG + +A ++F
Sbjct: 256 NEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVF 315
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ M +L TWN+MI L H G EAL++FS++ +KPD TF +
Sbjct: 316 ETMPRKSLPTWNSMITS-----------LGVHGLGQEALNLFSEMERVNVKPDAITFIGV 364
Query: 395 LTICSRLVALEQG 407
L C + +++G
Sbjct: 365 LCACVHIKNVKEG 377
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 146/301 (48%), Gaps = 32/301 (10%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+++ +G ++ +++ C N S+ +++H ++K G D FV L++ Y KCG
Sbjct: 115 NMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCG 174
Query: 124 -------------------------------NMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+++EA+++FD +P NVVSWT++I+GY++
Sbjct: 175 HTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIR 234
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N QPE A+ +F M +P T+ + + AC+ + + LG+ IH Y +K E +
Sbjct: 235 NQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYL 294
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
G +L +YS CGS+ AI+ F + K++ +W ++I + G +G + L FS+M +
Sbjct: 295 GTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNV 354
Query: 273 QPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ T + C + +++ G A + G A + LY + +DEA
Sbjct: 355 KPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAF 414
Query: 332 K 332
K
Sbjct: 415 K 415
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/591 (36%), Positives = 338/591 (57%), Gaps = 13/591 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C + +H +V++G QD +V T L++ Y K GN+EEA+ VFD L
Sbjct: 156 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 215
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V+WT++I+GY + + +++ +F M E P + + L+ACS LE + GKQIH
Sbjct: 216 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 275
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AYV++ TE D SV N L Y+ C + + K F+++ KN++SWTT+I +N
Sbjct: 276 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 335
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ ++ F +M G +P+ F TS+ + CG+ +L G QVH+ IK S+ V+N ++
Sbjct: 336 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 395
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K L+ +A+K+FD M+ N++++NAMI G++ L +EAL +F +
Sbjct: 396 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKL-----------SEALELFHE 444
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ KP+ +TF++++T S L +L G+Q H +K G V ALV+MY KCG
Sbjct: 445 MRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 504
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A ++F R ++ W SMI+ A H + +AL +F +M+ G++PN VTFV L+A
Sbjct: 505 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 564
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+AG V + L +F M + IKP +HY C++ + R G + EA +FI+KM EP +
Sbjct: 565 CSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 623
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR GN+ELG YAAE + PKD SY +L +IF S G W DV V++
Sbjct: 624 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 683
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ + SWI + +KV F D H + A+I VLD L++ K GY
Sbjct: 684 SSEVVKEPGRSWIEVNNKVNVFIARDTTH-READIGSVLDILIQHIKGAGY 733
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 162/537 (30%), Positives = 286/537 (53%), Gaps = 19/537 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ +LLQ ++R + + +IIH I+ +G D F+ L+NV K ++ A+ VFD +P
Sbjct: 52 FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 111
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGK 195
N+++W+S++S Y Q E A+ VF+D+ ++G +P L + + AC+ L + G
Sbjct: 112 HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGA 171
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H +VV+ + D VG SL YS G++ A F+++ EK ++WTT+I + G
Sbjct: 172 QLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG 231
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L F++M + P+ + ++S+ S C + L G Q+H+ ++ G ++ V N
Sbjct: 232 RSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVN 291
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ Y KC V +KLFD M N+++W MI+G+ Q ++ EA+ +
Sbjct: 292 VLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQ-----------NSFDWEAMKL 340
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++N G KPD + +S+LT C ALEQG Q+HA T+K SD V L++MY K
Sbjct: 341 FGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAK 400
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
+ A +VF M+ + +IS+ +MI G+++ +AL+LF +M + +PN+ TF
Sbjct: 401 SNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAAL 460
Query: 496 LAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
+ A SN A + + + ++++ P + + L+DM+ + G IEEA +
Sbjct: 461 ITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR 518
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDIFVSAGRWED 609
+ V W+ I+ +HG E +++K ++P + ++ +L AGR ED
Sbjct: 519 -DVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGRVED 573
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ N SL + + H +VK G FV LV++Y KCG++EEA+K+F++
Sbjct: 456 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 515
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VV W S+IS + Q+ + E A+ +F +M++ G P VT L+ACS + G
Sbjct: 516 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGL 575
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
+ + + T + SL G L A + ++ E + W +++ AC
Sbjct: 576 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSAC 632
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 242/713 (33%), Positives = 377/713 (52%), Gaps = 34/713 (4%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVS----LLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R L ++L L V TS+Y+S LL R S + H H + F
Sbjct: 22 RDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDC------NVF 75
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
L++ Y K +E A ++FD +P+ + VS+ +LI+ Y + + A +FL+M EA
Sbjct: 76 SFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAF 135
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
TL +TAC ++ L +Q+HA V + SVGN+L + YS G L A
Sbjct: 136 LDMDGFTLSGIITACGI--NVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEAR 193
Query: 231 KAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F+ + E ++ +SW +++ A ++ E + L + +M G+ + FTL S+ + +
Sbjct: 194 RIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNV 253
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG-LVDEAQKLFDGMSHVNLVTWNAM 348
L G Q H+ IK GY N V + ++ LY KCG + + +K+FD +S+ +LV WN M
Sbjct: 254 QDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTM 313
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I+G++ DL+ EAL F +L G +PD + +++ CS + + QG
Sbjct: 314 ISGYSLYEDLSD----------EALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGR 363
Query: 409 QIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
Q+H L LK S+ + V AL+ MY KCG + A +F M +S+ SMI G+A H
Sbjct: 364 QVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQH 423
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
+ Q+L LF+ ML P +TF+ LAAC++ G V + YF MM++++ I+P H
Sbjct: 424 GMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGH 483
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
+ C+ID+ R G + EA I+ + F+P WS + CR HGN+EL AA +LL+L
Sbjct: 484 FSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLD 543
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
P + Y ML +I+ GR +D A V+ L R+ + + SWI + +++ F D H
Sbjct: 544 PLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFH 603
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQ---------ESFELTDEESASVYHSEKLAIAFGLL 698
P +I + L+E++ K K GY + + +EE +HSEKLA++FGL+
Sbjct: 604 PMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLM 663
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
+T PILV K+ +C DCHN IK I+ + REI VRDS R H F +G C+C
Sbjct: 664 STREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSC 716
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L++F L C L G+ +HAL +K+ + + + +Y KC R+ A RVF
Sbjct: 8 LHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
+ S+ ++I+ +A S A QLF++M +P+ V++ +AA + G
Sbjct: 68 HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEM----PQPDSVSYNTLIAAYARRGDTQP 123
Query: 508 ALGYFEMMQKEY 519
A F M++ +
Sbjct: 124 AFQLFLEMREAF 135
>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
Length = 679
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/692 (34%), Positives = 374/692 (54%), Gaps = 28/692 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ SLLQ+C +SL IHA IV TG +D F+ L+ +YGKCG MEEA+ VF+ +
Sbjct: 2 AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N+ SW+ +I V N A+ ++ M G V L ++ACSSL S+ G+
Sbjct: 62 ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGR 121
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGEN 254
+ A + V NSL ++Y GS+++A K F + +++V+SWT +I +
Sbjct: 122 ALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALH 181
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSV--CGTMLSLRVGAQVHSLGIKLGYASNLR 312
G L FF KM++EG++PNE T SI ++ C + L G ++H L + G S++
Sbjct: 182 GCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLDSSI- 240
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
VRNS++ +Y KCG +DEA+++F+ NL+TW+ MIA + S + G +
Sbjct: 241 VRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAY-----------SLNGDGRQ 289
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVA---LEQGEQIHALTLKTGFLSDVVVGTA 428
ALS++ K++ G++PD YTF+S+L CS +A L +G +H G +V+ TA
Sbjct: 290 ALSLYKKMDLEGLEPDEYTFTSLLDACS--IAGDTLTEGRALHRRLEAKGLEKKMVLATA 347
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+NMY + G++E A RVF +M+ L++WT++I FA H H A+ L M L GV+ +
Sbjct: 348 LINMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQAD 406
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+ F+ L ACS+A ++ L F+ M ++ ++ HY C++D+ R G + EA + +
Sbjct: 407 NIVFLSVLHACSHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELL 466
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
M FEP + +A CR G+ G A L P D Y ++ + + +W+
Sbjct: 467 HSMPFEPAHMEMKTLLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWD 526
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYS-FKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+VA V+ + + + WS + +K++V+ F N H ++AEI L L K
Sbjct: 527 EVAEVQERMAKLGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEG 586
Query: 668 GY-----KQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY + E +E HSE++AIAFGLL P PI VVK+ +C DCH
Sbjct: 587 GYIPDTGQIGHRLEEDGKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVA 646
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
KII+ R I+VRD+ R H+F NG C+C D+
Sbjct: 647 KIISRSVGRRIVVRDAYRFHRFENGTCSCGDY 678
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 134/405 (33%), Positives = 210/405 (51%), Gaps = 23/405 (5%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
V + L C S+ G++IHA +V D +GN L +Y CG++ A F +
Sbjct: 1 VAFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEK 60
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I N+ SW+ +IGAC +NG A + L + M EG++ + L + S C ++ SL G
Sbjct: 61 IESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQ 354
+ + +G+ + V NS++ +Y K G +D A+K F M+ ++V+W AMI+G A
Sbjct: 121 RALEARITSMGFHLHPVVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFA- 179
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI--CSRLVALEQGEQIHA 412
H AL F K+ + G++P+ TF SIL + CS L L G+++H
Sbjct: 180 ----------LHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHE 229
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSH 471
L L G L +V +L+NMY KCG ++ A RVF R LI+W++MI ++ +
Sbjct: 230 LILDAG-LDSSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGR 288
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV---MDHY 528
QAL L++ M L G+ P++ TF L ACS AG + L + + + K + M
Sbjct: 289 QALSLYKKMDLEGLEPDEYTFTSLLDACSIAG---DTLTEGRALHRRLEAKGLEKKMVLA 345
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
LI+M+ R G +E+A +KM+ N V W+ IA +HGN+
Sbjct: 346 TALINMYGRYGQLEDALRVFEKMN-HWNLVAWTALIAAFAQHGNV 389
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 224/478 (46%), Gaps = 39/478 (8%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG ++ ++ + C + SL + + A I G H V L+N+Y K G+++
Sbjct: 95 EGVRLDMVVLINPVSACSSLGSLDHGRALEARITSMGFHLHPVVWNSLLNMYCKAGSIDN 154
Query: 128 AQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT--ALTA 184
A+K F ++ +VVSWT++ISG+ + +LA+ F M+ G P VT + AL A
Sbjct: 155 ARKFFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEA 214
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMS 243
CS+L + GK++H ++ D + V NSL ++Y CG L+ A + F R + +N+++
Sbjct: 215 CSNLNLLAAGKKLHELILDAGL-DSSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLIT 273
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML-SLRVGAQVHSLG 302
W+T+I A NG+ Q L + KM EG++P+E+T TS+ C +L G +H
Sbjct: 274 WSTMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRL 333
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
G + + +++ +Y + G +++A ++F+ M+H NLV W A+IA AQ
Sbjct: 334 EAKGLEKKMVLATALINMYGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQ-------- 385
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLS 421
+G A+ + +++ G++ D F S+L CS V LE G + G
Sbjct: 386 ----HGNVHAIDLSWRMHLEGVQADNIVFLSVLHACSHAVVLEAGLSCFQEMVADFGVRG 441
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ +V++ +CGR+ A + HS+ + + L
Sbjct: 442 GAAHYSCMVDLLARCGRVAEAEELL--------------------HSMPFEPAHMEMKTL 481
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
LA R + T GA A +G++ + +M Y D + + +LG
Sbjct: 482 LAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQERMAKLG 539
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/705 (33%), Positives = 384/705 (54%), Gaps = 62/705 (8%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKC-GNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IH I KT D V L+++YG C + +A+ VFD + N +SW S+IS Y +
Sbjct: 224 IHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRG 283
Query: 155 QPELAIHVFLDMLEAG---NYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDD- 209
A +F M + G ++ N A + S LE R G+++HA+V++ D+
Sbjct: 284 DAVSAYDLFSSMQKEGLGFSFKPN----DAFSEFSVLEEGRRKGREVHAHVIRTGLNDNK 339
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT----------------------- 246
++GN L ++Y+ G++ A F + EK+ +SW +
Sbjct: 340 VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPE 399
Query: 247 --------VIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
VIGA ++ +V Q +++F +M+ G + T +I S ++ V Q
Sbjct: 400 YDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQ 459
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMM 356
+H+L +K + + + N+++ Y KCG ++E +K+F MS + V+WN+MI+G+
Sbjct: 460 IHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNE 519
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
L K A+ + + G + D +TF++IL+ C+ + LE+G ++HA ++
Sbjct: 520 LLHK-----------AMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIR 568
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
SDVVVG+ALV+MY KCGRI+ ASR F M R + SW SMI+G+A H +AL+L
Sbjct: 569 ACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKL 628
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F M+L G P+ VTFVG L+ACS+ G V E +F+ M + Y++ P ++H+ C++D+
Sbjct: 629 FTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLG 688
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESY 594
R G ++E DFI M +PN +IW +V A CR +G N ELG AAE LL+L+P++ +Y
Sbjct: 689 RAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNY 748
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ S +WEDVA + +E + + SW+ +KD V+ F D LHP+ I+
Sbjct: 749 VLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIY 808
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVV 709
L EL K + GY Q + L D E + YHSEK+A+AF L + PI ++
Sbjct: 809 DKLRELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSAL-PIRIM 867
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH+ I+ + R+I++RDS R H F +G C+C D+
Sbjct: 868 KNLRVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDY 912
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 252/517 (48%), Gaps = 46/517 (8%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +H +K G + F+ L+N+Y + G++ AQK+FD + N+V+W LISGY Q
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC--SSLESIRLGKQIHAYVVKYQTEDDT 210
N +P+ A F DM+ AG P + G+AL AC S +LG QIH + K + D
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 237
Query: 211 SVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V N L S+Y +C S N A F+ I +N +SW ++I G+AV FS M
Sbjct: 238 VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 297
Query: 270 EGI----QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN-LRVRNSIMYLYLKC 324
EG+ +PN+ + S R G +VH+ I+ G N + + N ++ +Y K
Sbjct: 298 EGLGFSFKPND----AFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKS 353
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAG---------HAQMMDLAKD-DLSAHNGGTEALS 374
G + +A +F+ M + V+WN++I+G A+M L + D + N ALS
Sbjct: 354 GAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALS 413
Query: 375 -----------IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
F ++ G TF +IL+ S L E QIHAL LK D
Sbjct: 414 DSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDT 473
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+G AL++ Y KCG + ++F MS TR +SW SMI+G+ ++ L H+A+ L M+
Sbjct: 474 AIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQ 533
Query: 483 AGVRPNQVTFVGALAACSNA-----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
G R + TF L+AC++ GM A G ++ + + L+DM+ +
Sbjct: 534 KGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSA------LVDMYSK 587
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
G I+ A F + M N W+ I+G RHG+ E
Sbjct: 588 CGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGE 623
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 205/472 (43%), Gaps = 63/472 (13%)
Query: 3 SVPWAAAAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEA 62
SV W + + + + + ++ + +L + VS+ + +I +SE S +
Sbjct: 371 SVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSW----NSVIGALSDSEASVSQAVKYF 426
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI---IHAHIVKTGSHQDFFVMTFLVNVY 119
L ++ G + +++++L SLS E+ IHA ++K D + L++ Y
Sbjct: 427 LQMMRGGWGLSRVTFINILSAV---SSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCY 483
Query: 120 GKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
GKCG M E +K+F + + VSW S+ISGY+ N A+ + M++ G + T
Sbjct: 484 GKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 543
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
T L+AC+S+ ++ G ++HA ++ E D VG++L +YS CG ++ A + F +
Sbjct: 544 ATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPL 603
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+NV SW ++I +G + L+ F++M+ +G P+ T + S C +
Sbjct: 604 RNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHV--------- 654
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
G V+E + F MS V ++ + + M+DL
Sbjct: 655 --------------------------GFVEEGFEHFKSMSEVYRLS--PRVEHFSCMVDL 686
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA--LEQGEQIHALTLK 416
G + + F +NS MKP++ + ++L C R E G + + L+
Sbjct: 687 L-----GRAGKLDEVGDF--INSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE 739
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISWTSMITG 463
+ V L NMY + E ++ M + SW +M G
Sbjct: 740 LE-PQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDG 790
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF S++ E+ ++H ++K GF+ ++ + L+N+Y + G + A ++F EM
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
S R L++W +I+G+ + +A F DM+ AG PN F AL AC +G L
Sbjct: 161 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 220
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD--FEPNEVIWSVFIAGC 567
G ++ K + D +C + + + C++ A D D N + W+ I+
Sbjct: 221 G-VQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVY 279
Query: 568 RRHGNMELGFYAAEQLLK------LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
R G+ + + K KP D S +L+ GR V++ + K
Sbjct: 280 SRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDNK 339
Query: 622 LS 623
++
Sbjct: 340 VA 341
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/704 (32%), Positives = 371/704 (52%), Gaps = 54/704 (7%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G ++ + ++G K + S+L+ C L ++IH + +K + FV T LV+
Sbjct: 118 GLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVD 177
Query: 118 VYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y KC + EA+ +F +LP R N V WT++++GY QN + AI F +M G +
Sbjct: 178 MYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHF 237
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T + LTAC+S+ + G+Q+H ++ + V ++L +Y+ CG L SA + +
Sbjct: 238 TFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTM 297
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+V+ W ++I C +G + L F KM + I+ ++FT S+ + +L++G
Sbjct: 298 EIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGE 357
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
VHSL IK G+ + V N+++ +Y K G + A +F+ + ++++W +++ G+
Sbjct: 358 SVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYV--- 414
Query: 357 DLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
HNG E AL +F + ++ + D + + + + C+ L +E G Q+HA +
Sbjct: 415 ---------HNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFI 465
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K+ S + +L+ MY KCG +E A RV M TR +ISWT++I G+A +
Sbjct: 466 KSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN-------- 517
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
G+V YFE M+K Y IKP D Y C+ID+
Sbjct: 518 ---------------------------GLVETGQSYFESMEKVYGIKPASDRYACMIDLL 550
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G I EA + +MD EP+ IW ++ CR HGN+ELG A + L+KL+P + Y
Sbjct: 551 GRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYV 610
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L ++F AGRWED A ++ + + + +SWI +K +V++F D HP +AEI+
Sbjct: 611 LLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKSQVHTFISEDRSHPLAAEIYS 670
Query: 656 VLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
+DE++ K G+ +F L D +E + YHSEKLA+AFGLL +PI + K
Sbjct: 671 KIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEKLAVAFGLLTVAKGAPIRIFK 730
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+ +K I+S+ R II+RD H F+ G C+C DF
Sbjct: 731 NLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCSCGDF 774
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/505 (31%), Positives = 267/505 (52%), Gaps = 18/505 (3%)
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
++D + +++ Y GN+ EA+K+F+ P N ++W+SL+SGY +N + F
Sbjct: 65 YRDKYTWNIMISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQ 124
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G P+ TLG+ L ACS+L + GK IH Y +K Q E + V L +YS C
Sbjct: 125 MWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184
Query: 226 LNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L A F + + KN + WT ++ +NGE+++ ++ F +M ++G++ N FT SI +
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILT 244
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C ++ + G QVH I G+ N+ V+++++ +Y KCG + A+ + D M ++V
Sbjct: 245 ACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVC 304
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN+MI G H EAL +F K+++ ++ D +T+ S+L + L
Sbjct: 305 WNSMIVG-----------CVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNL 353
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ GE +H+LT+KTGF + V ALV+MY K G + A VF ++ + +ISWTS++TG+
Sbjct: 354 KIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGY 413
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
++ +ALQLF DM A V +Q +AC+ ++ K +
Sbjct: 414 VHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKS-SAGSL 472
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAE 581
+ LI M+ + GC+E+A M+ N + W+ I G ++G +E G F + E
Sbjct: 473 LSAENSLITMYAKCGCLEDAIRVXDSMETR-NVISWTAIIVGYAQNGLVETGQSYFESME 531
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGR 606
++ +KP + YA ++D+ AG+
Sbjct: 532 KVYGIKPAS-DRYACMIDLLGRAGK 555
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 46/300 (15%)
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK-----D 361
Y+SNL N ++ K G VDEA+KLFD M + + TWN MI+ +A + +L + +
Sbjct: 34 YSSNLD-SNQLLSELSKNGRVDEARKLFDQMPYRDKYTWNIMISAYANLGNLVEARKLFN 92
Query: 362 DLSAHNGGT---------------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+ N T E L FS++ S G KP YT S+L CS L L
Sbjct: 93 ETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLLHT 152
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFA 465
G+ IH +K +++ V T LV+MY KC + A +F + R + WT+M+TG+A
Sbjct: 153 GKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYA 212
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS-----------NAGMVYEALGYFEM 514
+ S +A+Q F++M G+ N TF L AC+ + +++ G
Sbjct: 213 QNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFG---- 268
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
P + L+DM+ + G + A + M+ + + V W+ I GC HG ME
Sbjct: 269 --------PNVYVQSALVDMYAKCGDLASARMILDTMEID-DVVCWNSMIVGCVTHGYME 319
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/710 (32%), Positives = 389/710 (54%), Gaps = 24/710 (3%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P S+ Q L +T T ++ LL++C++ +S+S + I A ++K+G +
Sbjct: 26 PELSINSQFRLLCITCDSLTTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPVEL-SG 84
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+ LV+ KCG + A+++FD +P ++V+W S+I+ Y+++ + + A+ ++ M+
Sbjct: 85 SKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVL 144
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIK 231
P TL + A S L + ++ H V E + VG++L +Y G A
Sbjct: 145 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 204
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
+R+ EK+V+ T +I + GE + ++ F ML E +QPNE+T S+ CG +
Sbjct: 205 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 264
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G +H L +K G+ S L + S++ +YL+C LVD++ +F + + N VTW ++I+G
Sbjct: 265 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISG 324
Query: 352 HAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
Q NG E AL F K+ +KP+ +T SS L CS L E+G Q+
Sbjct: 325 LVQ------------NGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEEGRQV 372
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H + K GF D G+ L+ +Y KCG + A VF +S +IS +MI +A +
Sbjct: 373 HGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 432
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL+LFE M+ G++PN VT + L AC+N+G+V E F+ +K+ KI DHY C
Sbjct: 433 REALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIMLTNDHYAC 491
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++DM R G +EEA I ++ P+ V+W ++ C+ H +E+ ++L++ P D
Sbjct: 492 MVDMLGRAGRLEEAEMLITEVT-NPDLVLWRTLLSACKVHRKVEMAERITRKILEIAPGD 550
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQ 649
+ +L +++ S G+W+ V +K+ +E KL + SW+ I + ++F D HP
Sbjct: 551 EGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVEIDKETHTFMAGDLFSHPN 610
Query: 650 SAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVS 704
S +I + L+EL++KAK GY + +S E T +E + HSEKLAIAF + +
Sbjct: 611 SEQILENLEELIKKAKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRN-VGG 669
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I ++K+ +C DCH++IKI++ + REII RDSKR H F +G C+C D+
Sbjct: 670 SIRILKNLRVCVDCHSWIKIVSRIIKREIICRDSKRFHHFRDGSCSCGDY 719
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/693 (32%), Positives = 376/693 (54%), Gaps = 44/693 (6%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
+L + IHAHI+KT H + +N + G AQ W +I+
Sbjct: 55 TLEQTKQIHAHIIKTHFHH---ALQIPLNDF-PSGLSPSAQ-------------WNFVIT 97
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y + +QP A++V+ + + N + L AC + +LGK+IH +V+K +
Sbjct: 98 SYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDR 157
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
D VGN+L +Y C + A F+++ E++V+SW+T+I + N E L +M
Sbjct: 158 DVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMN 217
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS--IMYLYLKCGL 326
++P+E + S+ ++ ++R+G +H+ I+ ++ V + ++ +Y KCG
Sbjct: 218 FMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGH 277
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQ---------MMDLAKDD--------LSAH--- 366
+ A++LF+G++ +V+W AMIAG + + D ++ LSA+
Sbjct: 278 LGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQA 337
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
N +A ++F ++ +SG++P T S+L++C+ AL+ G+ +H+ K D ++
Sbjct: 338 NCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILN 397
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TALV+MY KCG I A R+F+E +R + W ++ITGFA H +AL +F +M GV+
Sbjct: 398 TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 457
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN +TF+G L ACS+AG+V E FE M + + P ++HY C++D+ R G ++EA +
Sbjct: 458 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE 517
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
IK M +PN ++W +A CR H N +LG AA QLL+++P++C ++ +I+ +A R
Sbjct: 518 MIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANR 577
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W D A V+ + + + S I + V+ F D HPQ I ++L E+ K
Sbjct: 578 WSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNE 637
Query: 667 FGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY S L ++E+A YHSEKLA+AFGL++T +PI +VK+ +C DCH
Sbjct: 638 AGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAA 697
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+++ + R IIVRD R H F G+C+C D+
Sbjct: 698 TKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 730
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 199/424 (46%), Gaps = 46/424 (10%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C + IH ++K G +D FV L+ +YG+C +E A+ VFD +
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 188
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSW+++I +N + ++A+ + +M P+ V + + + + ++R+GK +H
Sbjct: 189 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248
Query: 199 AYVVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC----- 251
AYV++ + V + L +Y+ CG L A + FN + +K V+SWT +I C
Sbjct: 249 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 308
Query: 252 ----------GENGEAV----------------QGLRFFSKMLSEGIQPNEFTLTSISSV 285
+N + + Q F +M + G++P + T+ S+ S+
Sbjct: 309 LEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSL 368
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C +L +G VHS K + + +++ +Y KCG ++ A +LF ++ W
Sbjct: 369 CAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMW 428
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
NA+I G A H G EAL IF+++ G+KP+ TF +L CS +
Sbjct: 429 NAIITGFAM-----------HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 477
Query: 406 QGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG 463
+G+++ + T G + + +V++ + G ++ A + M + I W +++
Sbjct: 478 EGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537
Query: 464 FANH 467
H
Sbjct: 538 CRLH 541
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 192/456 (42%), Gaps = 71/456 (15%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG-NSLCSLYSTCGSLNSAIK 231
PT + + L ++ KQIHA+++K + N S S
Sbjct: 38 PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSA------- 90
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
W VI + + + L ++++ + + F S+ CG +
Sbjct: 91 -----------QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSW 139
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
++G ++H +K G ++ V N++M +Y +C V+ A+ +FD M ++V+W+ MI
Sbjct: 140 TQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRS 199
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
LS + AL + ++N ++P S++ + + + G+ +H
Sbjct: 200 -----------LSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248
Query: 412 ALTLKTGFLSD--VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG------ 463
A ++ V TAL++MY KCG + A ++F ++ +T++SWT+MI G
Sbjct: 249 AYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 308
Query: 464 -------------------------FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+A + QA LF+ M +GVRP +VT V L+
Sbjct: 309 LEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSL 368
Query: 499 CSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEAFD-FIKKMDFEPN 556
C+ AG + + KE ++ +++ L+DM+ + G I A FI+ + +
Sbjct: 369 CAVAGALDLGKWVHSYIDKERVEVDCILN--TALVDMYAKCGDINAAGRLFIEAISRDI- 425
Query: 557 EVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKD 590
+W+ I G HG E L +A + +KP D
Sbjct: 426 -CMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 460
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 10/191 (5%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
T G + + VSLL C +L + +H++I K D + T LV++Y KCG++
Sbjct: 352 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 411
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A ++F ++ W ++I+G+ + E A+ +F +M G P ++T L ACS
Sbjct: 412 AAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 471
Query: 187 SLESIRLGKQ-----IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-N 240
+ GK+ +H + + Q E + L G L+ A + + K N
Sbjct: 472 HAGLVTEGKKLFEKMVHTFGLVPQIEH----YGCMVDLLGRAGLLDEAHEMIKSMPIKPN 527
Query: 241 VMSWTTVIGAC 251
+ W ++ AC
Sbjct: 528 TIVWGALVAAC 538
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/749 (30%), Positives = 382/749 (51%), Gaps = 89/749 (11%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + + +++T +Y S+LQ C KSL++ + +H+ I D + LV+ Y C
Sbjct: 88 LVCMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATC 147
Query: 123 GNMEEAQKVFDNLPRINV------------------------------------------ 140
G+++E ++VFD + + NV
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL 207
Query: 141 ---------VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+SW S+ISGYV N E + ++ M+ G T+ + L C++ ++
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H+ +K E + N+L +YS CG L+ A++ F ++ E+NV+SWT++I
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+G + + +M EG++ + +TSI C SL G VH ASNL
Sbjct: 328 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 387
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V N++M +Y KCG ++ A +F M ++++WN M+
Sbjct: 388 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE-------------------- 427
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+KPD T + IL C+ L ALE+G++IH L+ G+ SD V ALV+
Sbjct: 428 ------------LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVD 475
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG + A +F + ++ L+SWT MI G+ H ++A+ F +M AG+ P++V+
Sbjct: 476 LYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVS 535
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G++ + +F +M+ ++ I+P ++HY C++D+ R G + +A+ FI+ +
Sbjct: 536 FISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETL 595
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
P+ IW + GCR + ++EL AE++ +L+P++ Y +L +I+ A + E+V
Sbjct: 596 PIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVK 655
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
++ ++ L + SWI IK +V F N+ HP S +I +L ++ K K GY
Sbjct: 656 RMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYF 715
Query: 671 QQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ + L + +E A HSEKLA+AFGLL P I V K+ +C DCH K +
Sbjct: 716 PKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFM 775
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ T REI++RDS R H F +G+C+CR F
Sbjct: 776 SKETRREIVLRDSNRFHHFKDGYCSCRGF 804
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/360 (30%), Positives = 189/360 (52%), Gaps = 36/360 (10%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG +E R LG + + L G V ++ +S+L C N +LS + +H+ +K+ +
Sbjct: 229 NGLTE--RGLGIYKQMMYL--GIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
L+++Y KCG+++ A +VF+ + NVVSWTS+I+GY ++ + AI + M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 344
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ G V + + L AC+ S+ GK +H Y+ + V N+L +Y+ CGS+
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F+ + K+++SW T++G ++P+ T+ I C
Sbjct: 405 GANSVFSTMVVKDIISWNTMVGE---------------------LKPDSRTMACILPACA 443
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ +L G ++H ++ GY+S+ V N+++ LY+KCG++ A+ LFD + +LV+W
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MIAG+ H G EA++ F+++ +G++PD +F SIL CS LEQG
Sbjct: 504 MIAGYGM-----------HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/696 (32%), Positives = 374/696 (53%), Gaps = 14/696 (2%)
Query: 72 VQTSSY--VSLLQECVN---RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
V+ SS+ VS++ C N + L + +HA+ ++ G F + T LV +YGK G +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLA 253
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++ + + ++V+W +++S QN Q A+ +M+ G P T+ + L ACS
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
LE +R GK++HAY +K + D+ S VG++L +Y C + S + F+ + ++ + W
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 246 TVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +N + L F M S G+ N T+ + C + +H +K
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V+N++M +Y + G +D A ++F M +LVTWN MI G+ L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H + + +KP+ T +IL C+ L AL +G++IHA +K +DV
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ALV+MY KCG ++ + +VF ++ + +I+W +I + H +A+ L M++ G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+PN+VTF+ AACS++GMV E L F +M+ +Y ++P DHY C++D+ R G I+EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 545 FDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
+ + M + N+ WS + R H N+E+G AA+ L++L+P Y +L +I+ S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG W+ V+ +E+ + + SWI D+V+ F D HPQS ++ L+ L E+
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 664 AKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY S E ++E HSEKLAIAFG+LNT + I V K+ +C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K I+ + REII+RD +R H+F NG C+C D+
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 185/686 (26%), Positives = 325/686 (47%), Gaps = 91/686 (13%)
Query: 16 TKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEP----------VRSLGFQEAL-- 63
++ + P AT V+ SG+ I ++ + P VRS +EA+
Sbjct: 25 SRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLT 84
Query: 64 --SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYG 120
++ G K ++ +LL+ + + + + IHAH+ K G D V LVN+Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG+ KVFD + N VSW SLIS + E+A+ F ML+ P++ TL +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 181 ALTACSSL---ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+TACS+L E + +GKQ+HAY ++ + E ++ + N+L ++Y G L S+
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++++W TV+ + +N + ++ L + +M+ EG++P+EFT++S+ C + LR G +
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 298 VHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H+ +K G N V ++++ +Y C V +++FDGM + WNAMIAG++Q
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ-- 381
Query: 357 DLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ H+ EAL +F + S+G+ + T + ++ C R A + E IH +
Sbjct: 382 -------NEHD--KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K G D V L++MY + G+I+ A R+F +M R L++W +MITG+ AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 476 LFEDML-----------LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
L M ++PN +T + L +C+ AL + + Y IK
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA----ALSALAKGKEIHA-YAIKNN 547
Query: 525 MDHYM----CLIDMFVRLGCI-------------------------------EEAFDFIK 549
+ + L+DM+ + GC+ +EA D ++
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 550 KM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVS 603
M +PNEV + A C G ++ G FY + ++P + YA ++D+
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS-DHYACVVDLLGR 666
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWS 629
AGR ++ + N+ + ++ WS
Sbjct: 667 AGRIKEAYQLMNMMPRD-FNKAGAWS 691
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/696 (32%), Positives = 374/696 (53%), Gaps = 14/696 (2%)
Query: 72 VQTSSY--VSLLQECVN---RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
V+ SS+ VS++ C N + L + +HA+ ++ G F + T LV +YGK G +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLA 253
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++ + + ++V+W +++S QN Q A+ +M+ G P T+ + L ACS
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
LE +R GK++HAY +K + D+ S VG++L +Y C + S + F+ + ++ + W
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 246 TVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +N + L F M S G+ N T+ + C + +H +K
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V+N++M +Y + G +D A ++F M +LVTWN MI G+ L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H + + +KP+ T +IL C+ L AL +G++IHA +K +DV
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ALV+MY KCG ++ + +VF ++ + +I+W +I + H +A+ L M++ G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+PN+VTF+ AACS++GMV E L F +M+ +Y ++P DHY C++D+ R G I+EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 545 FDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
+ + M + N+ WS + R H N+E+G AA+ L++L+P Y +L +I+ S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG W+ V+ +E+ + + SWI D+V+ F D HPQS ++ L+ L E+
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 664 AKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY S E ++E HSEKLAIAFG+LNT + I V K+ +C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K I+ + REII+RD +R H+F NG C+C D+
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 185/686 (26%), Positives = 325/686 (47%), Gaps = 91/686 (13%)
Query: 16 TKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEP----------VRSLGFQEAL-- 63
++ + P AT V+ SG+ I ++ + P VRS +EA+
Sbjct: 25 SRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLT 84
Query: 64 --SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYG 120
++ G K ++ +LL+ + + + + IHAH+ K G D V LVN+Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG+ KVFD + N VSW SLIS + E+A+ F ML+ P++ TL +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 181 ALTACSSL---ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+TACS+L E + +GKQ+HAY ++ + E ++ + N+L ++Y G L S+
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++++W TV+ + +N + ++ L + +M+ EG++P+EFT++S+ C + LR G +
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 298 VHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H+ +K G N V ++++ +Y C V +++FDGM + WNAMIAG++Q
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ-- 381
Query: 357 DLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ H+ EAL +F + S+G+ + T + ++ C R A + E IH +
Sbjct: 382 -------NEHD--KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K G D V L++MY + G+I+ A R+F +M R L++W +MITG+ AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 476 LFEDML-----------LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
L M ++PN +T + L +C+ AL + + Y IK
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA----ALSALAKGKEIHA-YAIKNN 547
Query: 525 MDHYM----CLIDMFVRLGCI-------------------------------EEAFDFIK 549
+ + L+DM+ + GC+ +EA D ++
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 550 KM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVS 603
M +PNEV + A C G ++ G FY + ++P + YA ++D+
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS-DHYACVVDLLGR 666
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWS 629
AGR ++ + N+ + ++ WS
Sbjct: 667 AGRIKEAYQLMNMMPRD-FNKAGAWS 691
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/616 (34%), Positives = 350/616 (56%), Gaps = 21/616 (3%)
Query: 145 SLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
+L+ Y ++++ +LA +F +M E ++ T L A L+ I LG+QIH++V+K
Sbjct: 184 TLVDSYCKSNRLDLACQLFKEMPEIDSF----TFAAVLCANIGLDDIVLGQQIHSFVIKT 239
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+ V N+L YS S+ A K F+ + E++ +S+ +I +G+ F
Sbjct: 240 NFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLF 299
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
++ +F ++ S+ L +G Q+H+ I S + V NS++ +Y KC
Sbjct: 300 RELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKC 359
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
G +EA+ +F ++H + V W AMI+ + Q E L +F+K+ + +
Sbjct: 360 GKFEEAEMIFTNLTHRSAVPWTAMISAYVQ-----------KGFYEEGLQLFNKMRQASV 408
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
D TF+S+L + + +L G+Q+H+ +K+GF+S+V G+AL+++Y KCG I+ A +
Sbjct: 409 IADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQ 468
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
F EM R ++SW +MI+ +A + + L+ F++M+L+G++P+ V+F+G L+ACS++G+
Sbjct: 469 TFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGL 528
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V E L +F M + YK+ P +HY ++DM R G EA + +M +P+E++WS +
Sbjct: 529 VEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 588
Query: 565 AGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
CR H N EL AA+QL ++ +D Y + +I+ +AG+WE+V+ V R+ +
Sbjct: 589 NACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVK 648
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE-- 681
+ +SW+ IK + + F ND HPQ EI K +D L + + GYK S L +E+
Sbjct: 649 KLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEK 708
Query: 682 ---SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDS 738
+ YHSE+LAIAF L++TP SPILV+K+ C DCH IK+I+ + REI VRDS
Sbjct: 709 FKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDS 768
Query: 739 KRLHKFVNGHCTCRDF 754
R H F +G C+C DF
Sbjct: 769 TRFHHFRDGFCSCGDF 784
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/558 (25%), Positives = 246/558 (44%), Gaps = 86/558 (15%)
Query: 90 LSNAEIIHA-HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L N E+ A + + H++ +++ Y K GN+ EA+K+FD + V+WT LI
Sbjct: 58 LKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIG 117
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
GY Q +Q + A +F+ M G P VT T L+ C+ E Q+ ++K +
Sbjct: 118 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDS 177
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
VGN+L Y L+ A + F + E + ++ V+ C G
Sbjct: 178 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSFTFAAVL--CANIG------------- 222
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+ + +G Q+HS IK + N+ V N+++ Y K V
Sbjct: 223 --------------------LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVI 262
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPD 387
+A+KLFD M + V++N +I+G+A +G + A +F +L +
Sbjct: 263 DARKLFDEMPEQDGVSYNVIISGYAW------------DGKHKYAFDLFRELQFTAFDRK 310
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ F+++L+I S + E G QIHA T+ T S+++VG +LV+MY KCG+ E A +F
Sbjct: 311 QFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFT 370
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM--- 504
++ R+ + WT+MI+ + + LQLF M A V +Q TF L A ++
Sbjct: 371 NLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSL 430
Query: 505 -------------------------VYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVR 537
VY G + + ++ P + + +I + +
Sbjct: 431 GKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ 490
Query: 538 LGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDC 591
G E K+M +P+ V + ++ C G +E G F + Q+ KL P+
Sbjct: 491 NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRR- 549
Query: 592 ESYAMLLDIFVSAGRWED 609
E YA ++D+ +GR+ +
Sbjct: 550 EHYASVVDMLCRSGRFNE 567
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 224/463 (48%), Gaps = 33/463 (7%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A + E P++ + ++ ++L + + + IH+ ++KT + FV L++ Y K
Sbjct: 198 ACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSK 257
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
++ +A+K+FD +P + VS+ +ISGY + + + A +F ++ T
Sbjct: 258 HDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATM 317
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+ S+ +G+QIHA + + + VGNSL +Y+ CG A F + ++
Sbjct: 318 LSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSA 377
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ WT +I A + G +GL+ F+KM + ++ T S+ ++ SL +G Q+HS
Sbjct: 378 VPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSF 437
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK G+ SN+ ++++ +Y KCG + +A + F M N+V+WNAMI+ +AQ
Sbjct: 438 IIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQ------- 490
Query: 362 DLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-------EQIHAL 413
NG EA L F ++ SG++PD +F +L+ CS +E+G QI+ L
Sbjct: 491 -----NGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKL 545
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITG---FANHSL 469
+ + V V+M + GR A ++ EM I W+S++ N L
Sbjct: 546 DPRREHYASV------VDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQEL 599
Query: 470 SHQAL-QLF--EDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ +A QLF E++ A N A N V++A+
Sbjct: 600 ARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAM 642
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 42/203 (20%)
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGY-----ASNLRV------------------- 313
+LTS++S+ L L V + + +K G+ SN RV
Sbjct: 14 SLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKM 73
Query: 314 -------RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
N ++ Y+K G + EA+KLFDGM VTW +I G++Q+
Sbjct: 74 PHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQL----------- 122
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
N EA +F ++ G +PD TF ++L+ C+ Q Q+ +K G+ S ++VG
Sbjct: 123 NQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVG 182
Query: 427 TALVNMYKKCGRIERASRVFVEM 449
LV+ Y K R++ A ++F EM
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEM 205
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 382/696 (54%), Gaps = 27/696 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K T +Y +++ SL + IHA ++K G D +V L+++Y K G +A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P ++VSW S+ISGY+ ++ +F +ML+ G P + +AL ACS +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 189 ESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
S ++GK+IH + V+ + E D V S+ +YS G ++ A + FN + ++N+++W +
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 248 IGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
IG NG F KM + G+QP+ +TSI+ + + ++ G +H ++ G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPD--VITSINLLPAS--AILEGRTIHGYAMRRG 360
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ ++ + +++ +Y +CG + A+ +FD M+ N+++WN++IA + Q
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ------------ 408
Query: 367 NGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG AL +F +L S + PD T +SIL + ++L +G +IHA +K+ + S+ ++
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+LV+MY CG +E A + F + + ++SW S+I +A H ++ LF +M+ + V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
PN+ TF LAACS +GMV E YFE M++EY I P ++HY C++D+ R G A
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
F+++M F P IW + R H ++ + +AAEQ+ K++ + Y +LL+++ AG
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK-- 663
RWEDV +K L + +S T S + K K + F D H + +I++VLD +
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVG 708
Query: 664 -----AKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
C + E+ + ++ HS +LA FGL++T + V +T +CR C
Sbjct: 709 EEDIYVHCVSRLRPETL-VKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKC 767
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H F++ + LT REI+V DSK H F NG C+C ++
Sbjct: 768 HEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNY 803
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 196/377 (51%), Gaps = 19/377 (5%)
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
ME+A ++FD + + + W +I G+ A+ + M+ AG T + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ + S+ GK+IHA V+K D V NSL SLY G A K F + E++++SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I G+ L F +ML G +P+ F+ S C + S ++G ++H ++
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 305 LGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ ++ V SI+ +Y K G V A+++F+GM N+V WN MI +A+
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR--------- 310
Query: 364 SAHNGG-TEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG T+A F K++ +G++PD+ T ++L A+ +G IH ++ GFL
Sbjct: 311 ---NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLP 363
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ TAL++MY +CG+++ A +F M+ + +ISW S+I + + ++ AL+LF+++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 482 LAGVRPNQVTFVGALAA 498
+ + P+ T L A
Sbjct: 424 DSSLVPDSTTIASILPA 440
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 31/292 (10%)
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
L+++A +LFD M+ + WN MI G ++ EA+ +S++ +G+K
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKG-----------FTSCGLYIEAVQFYSRMVFAGVK 127
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
D +T+ ++ + + +LE+G++IHA+ +K GF+SDV V +L+++Y K G A +V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F EM R ++SW SMI+G+ +L LF++ML G +P++ + + AL ACS+
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV--- 244
Query: 506 YEALGYFEMMQKEYKIKPVMDH--------YMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
Y M KE V ++DM+ + G + A M + N
Sbjct: 245 -----YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNI 298
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLK---LKPKDCESYAMLLDIFVSAGR 606
V W+V I R+G + F +++ + L+P S +L + GR
Sbjct: 299 VAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR 350
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/685 (33%), Positives = 366/685 (53%), Gaps = 22/685 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSH---QDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
LL+ C N L E IHAH++ T +D + + L+N+Y KC A+K+FD +P
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 137 RINVVSWTSLISGYVQNSQPELAI-HVFLDMLEAG-NYPTNVTLGTALTACSSLESIRLG 194
NVVSW +++ GY QNS + + +F M +G + P +CS+ I G
Sbjct: 97 ERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ H +KY V N+L +YS C AI+ + + ++ +++ + E
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G +GL K +E N T S + + L + QVHS ++ G+ + +
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KCG V AQ++FD +H + N I MD D S EAL+
Sbjct: 276 GALINMYGKCGKVLYAQRVFDD-THAQNIFLNTTI------MDAYFQDKSFE----EALN 324
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+FSK+++ + P+ YTF+ +L + L L+QG+ +H L LK+G+ + V+VG ALVNMY
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
K G IE A + F M+ R +++W +MI+G ++H L +AL+ F+ M+ G PN++TF+G
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+ G V + L YF + K++ ++P + HY C++ + + G ++A DF++ E
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ V W + C N LG AE ++ P D Y +L +I + WE VA V+
Sbjct: 505 WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVR 564
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-- 672
+L + + SWI I+++ + F D HP+ I+ + E++ K K GY
Sbjct: 565 SLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVA 624
Query: 673 ESFELTDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
+F DEE YHSEKLA+A+GL+ TP SP+ V K+ +C DCH+ IK+I+ ++
Sbjct: 625 GAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R I++RDS R H F++G C+C D+
Sbjct: 685 KRYIVIRDSNRFHHFLDGQCSCCDY 709
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 191/402 (47%), Gaps = 25/402 (6%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVV---KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L L C++ +R+G+ IHA+++ + +D NSL +LY C A K F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLR 293
+ E+NV+SW ++ +G + L+ F M G +PNEF T + C +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q H +K G S+ VRN+++Y+Y C EA ++ D + + +L +++ ++G+
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ E L + K + + T+ S L + S L L Q+H+
Sbjct: 214 EC-----------GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
++ GF ++V AL+NMY KCG++ A RVF + + + T+++ + +A
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA-LGYFEMMQKEYKIKPVMDHYM--- 529
L LF M V PN+ TF L + + ++ + L + +++ Y+ +H M
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR-----NHVMVGN 377
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
L++M+ + G IE+A M F + V W+ I+GC HG
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 58 GFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+E L VL E +Y+S L+ N + L+ A +H+ +V+ G + +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+N+YGKCG + AQ+VFD+ N+ T+++ Y Q+ E A+++F M P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T L + + L ++ G +H V+K + VGN+L ++Y+ GS+ A KAF
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + +++++W T+I C +G + L F +M+ G PN T + C + +
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 294 VGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
G + L K +++ I+ L K G+ +A+ ++V W ++
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/701 (32%), Positives = 375/701 (53%), Gaps = 12/701 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVN---RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
+L E + + + VS++ C N + L + +HA+ ++ G F + T LV +YGK
Sbjct: 103 MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGK 161
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G + ++ + + ++V+W +++S QN Q A+ +M+ G P T+ +
Sbjct: 162 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 221
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L ACS LE +R GK++HAY +K + D+ S VG++L +Y C + S + F+ + ++
Sbjct: 222 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 281
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ W +I +N + L F M S G+ N T+ + C + +H
Sbjct: 282 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 341
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+K G + V+N++M +Y + G +D A ++F M +LVTWN MI G+
Sbjct: 342 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 401
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
L H + + +KP+ T +IL C+ L AL +G++IHA +K
Sbjct: 402 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNL 461
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+DV VG+ALV+MY KCG ++ + +VF ++ + +I+W +I + H +A+ L
Sbjct: 462 ATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRM 521
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M++ GV+PN+VTF+ AACS++GMV E L F +M+ +Y ++P DHY C++D+ R G
Sbjct: 522 MMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAG 581
Query: 540 CIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
I+EA+ + M + N+ WS + R H N+E+G AA+ L++L+P Y +L
Sbjct: 582 RIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLA 641
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+I+ SAG W+ V+ +E+ + + SWI D+V+ F D HPQS ++ L+
Sbjct: 642 NIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLE 701
Query: 659 ELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
L E+ + GY S E ++E HSEKLAIAFG+LNT + I V K+
Sbjct: 702 TLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLR 761
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH K I+ + REII+RD +R H+F NG C+C D+
Sbjct: 762 VCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 802
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 172/619 (27%), Positives = 300/619 (48%), Gaps = 77/619 (12%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYGKCGNMEE 127
G K ++ +LL+ + + + + IHAH+ K G D V LVN+Y KCG+
Sbjct: 5 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
KVFD + N VSW SLIS + E+A+ F ML+ P++ TL + +TACS+
Sbjct: 65 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124
Query: 188 L---ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
L E + +GKQ+HAY ++ + E ++ + N+L ++Y G L S+ +++++W
Sbjct: 125 LPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTW 183
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
TV+ + +N + ++ L + +M+ EG++P+EFT++S+ C + LR G ++H+ +K
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243
Query: 305 LG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
G N V ++++ +Y C V +++FDGM + WNAMIAG++Q
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ--------- 294
Query: 364 SAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
+ H+ EAL +F + S+G+ + T + ++ C R A + E IH +K G D
Sbjct: 295 NEHD--KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 352
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML- 481
V L++MY + G+I+ A R+F +M R L++W +MITG+ AL L M
Sbjct: 353 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 412
Query: 482 ----------LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-- 529
++PN +T + L +C+ AL + + Y IK + +
Sbjct: 413 LERKVSKGASRVSLKPNSITLMTILPSCA----ALSALAKGKEIHA-YAIKNNLATDVAV 467
Query: 530 --CLIDMFVRLGCI-------------------------------EEAFDFIKKM---DF 553
L+DM+ + GC+ +EA D ++ M
Sbjct: 468 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 527
Query: 554 EPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
+PNEV + A C G ++ G FY + ++P + YA ++D+ AGR ++
Sbjct: 528 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS-DHYACVVDLLGRAGRIKEA 586
Query: 611 AVVKNLTREEKLSETDDWS 629
+ N+ + ++ WS
Sbjct: 587 YQLMNMMPRD-FNKAGAWS 604
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 209/409 (51%), Gaps = 24/409 (5%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCG 224
M+ G P N L A + L+ + LGKQIHA+V K+ D +V N+L +LY CG
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ K F+RI E+N +SW ++I + + L F ML E ++P+ FTL S+ +
Sbjct: 61 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120
Query: 285 VCGTML---SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
C + L +G QVH+ G++ G ++ + N+++ +Y K G + ++ L +
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRD 179
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
LVTWN +++ Q L EAL ++ G++PD +T SS+L CS L
Sbjct: 180 LVTWNTVLSSLCQNEQL-----------LEALEYLREMVLEGVEPDEFTISSVLPACSHL 228
Query: 402 VALEQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
L G+++HA LK G L + VG+ALV+MY C ++ RVF M R + W +M
Sbjct: 229 EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAM 288
Query: 461 ITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMV--YEALGYFEMMQK 517
I G++ + +AL LF M AG+ N T G + AC +G EA+ F + +
Sbjct: 289 IAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG 348
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ + V + L+DM+ RLG I+ A KM+ + + V W+ I G
Sbjct: 349 LDRDRFVQN---TLMDMYSRLGKIDIAMRIFGKME-DRDLVTWNTMITG 393
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/647 (32%), Positives = 362/647 (55%), Gaps = 17/647 (2%)
Query: 23 SSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQ 82
S + L +KN VS+ + +Q + N E + F+E V G V S Y SL +
Sbjct: 237 SVFSELPEKN-WVSWSAMIAGCVQNDRNVEGLEL--FKEMQGV---GVGVSQSIYASLFR 290
Query: 83 ECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVS 142
C +L + +H+H +K+ D V T +++Y KCG M +AQKV ++P+ ++ S
Sbjct: 291 SCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQS 350
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
+ ++I GY ++ + A+ F +L+ G +TL AL AC+S+ G+Q+H V
Sbjct: 351 YNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAV 410
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
K + + V N++ +Y C +L A F+ + ++ +SW +I AC +NG + L
Sbjct: 411 KSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLA 470
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
F+ M+ ++P++FT S+ C +L G ++H+ IK G + V +++ +Y
Sbjct: 471 HFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYC 530
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
KCG++++A K+ D +V+WNA+I+G + L + AH FS++
Sbjct: 531 KCGMIEKADKIHDRTEQKTMVSWNAIISGFS----LLQQSEDAHK-------FFSRMLEM 579
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G+ PD +T++++L C+ L + G+QIHA +K SDV + + LV+MY KCG ++ +
Sbjct: 580 GVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDS 639
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+F + R ++W +M+ G+A+H L +AL+LFE M L V+PN TFV L AC++
Sbjct: 640 QLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHM 699
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G+V + L YF++M EY + P +HY C++D+ R G I+EA + ++KM FE + VIW
Sbjct: 700 GLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRN 759
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
++ C+ HGN+E+ A LL+L P+D + +L +I+ AG W +V+ ++ + R KL
Sbjct: 760 LLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKL 819
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ SWI +KD+V++F D HP+ EI++ L L+ + + GY
Sbjct: 820 KKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGY 866
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 270/531 (50%), Gaps = 33/531 (6%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G +S +L+ C + +H +VK G D + L+ +Y KC ++++
Sbjct: 176 GVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDS 235
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF LP N VSW+++I+G VQN + + +F +M G + + +C++L
Sbjct: 236 LSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAAL 295
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++RLGK++H++ +K D VG + +Y+ CG + A K + + + ++ S+ +I
Sbjct: 296 SALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAII 355
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ Q L+ F +L G+ +E TL+ + C ++ G QVH L +K
Sbjct: 356 VGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISM 415
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
SN+ V N+I+ +Y KC + EA LFD M + V+WNA+IA Q NG
Sbjct: 416 SNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQ------------NG 463
Query: 369 G-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
E L+ F+ + S M+PD +T+ S+L C+ AL G +IH +K+G D VG
Sbjct: 464 NEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA 523
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV+MY KCG IE+A ++ +T++SW ++I+GF+ S A + F ML GV P
Sbjct: 524 ALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583
Query: 488 NQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIE 542
+ T+ L C+N V LG + +++++E + D Y+C L+DM+ + G ++
Sbjct: 584 DNFTYAAVLDTCANLATV--GLGKQIHAQIIKQELQ----SDVYICSTLVDMYSKCGNMQ 637
Query: 543 EA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
++ F+ DF V W+ + G HG E L + + QL+ +KP
Sbjct: 638 DSQLMFEKAPNRDF----VTWNAMLCGYAHHGLGEEALKLFESMQLVNVKP 684
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 158/553 (28%), Positives = 268/553 (48%), Gaps = 61/553 (11%)
Query: 53 PVRSLGFQEALSVLTEGP-KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
P+ + F T+ P K++T S++ QEC + SL+ + HA ++ G FV
Sbjct: 29 PIPTNNFSTLAQNQTQPPAKIRTFSHI--YQECSKQNSLNPGKQAHARMIFCGFEPTTFV 86
Query: 112 MTFLVNVYGKC-------------------------------GNMEEAQKVFDNLPRINV 140
L+ +Y KC G M+ A+K F +P +V
Sbjct: 87 SNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDV 146
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSW S+ISG++QN + +I VFL+M G +L L AC +LE +G Q+H
Sbjct: 147 VSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGL 206
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
VVK+ + D G++L +Y+ C L+ ++ F+ + EKN +SW+ +I C +N V+G
Sbjct: 207 VVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEG 266
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L F +M G+ ++ S+ C + +LR+G ++HS +K + S++ V + + +
Sbjct: 267 LELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDM 326
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG + +AQK+ M +L ++NA+I G+A+ + G +AL F L
Sbjct: 327 YAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYAR-----------SDRGFQALKSFQLLL 375
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+G+ D T S L C+ + +G Q+H L +K+ +S++ V A+++MY KC +
Sbjct: 376 KTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALA 435
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
AS +F M R +SW ++I + + L F M+ + + P+ T+ L AC+
Sbjct: 436 EASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACA 495
Query: 501 -----NAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDF 553
N GM E+ + K D ++ L+DM+ + G IE+A D I
Sbjct: 496 GRQALNTGM--------EIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKA-DKIHDRTE 546
Query: 554 EPNEVIWSVFIAG 566
+ V W+ I+G
Sbjct: 547 QKTMVSWNAIISG 559
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 237/502 (47%), Gaps = 76/502 (15%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQN-SQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A +F +P I ++++L QN +QP I F + + CS
Sbjct: 20 AIPLFKKIPPIPTNNFSTL----AQNQTQPPAKIRTFSHIYQE---------------CS 60
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGN-------------------------------S 215
S+ GKQ HA ++ E T V N S
Sbjct: 61 KQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNS 120
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ S Y++CG ++ A K F + E++V+SW +VI +NGE + + F +M G+ +
Sbjct: 121 IISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFD 180
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+L + CG + +G QVH L +K G+ ++ ++++ +Y KC +D++ +F
Sbjct: 181 RASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFS 240
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
+ N V+W+AMIAG Q ++ E L +F ++ G+ ++S+
Sbjct: 241 ELPEKNWVSWSAMIAGCVQ-----------NDRNVEGLELFKEMQGVGVGVSQSIYASLF 289
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ L AL G+++H+ LK+ F SD++VGTA ++MY KCGR+ A +V M +L
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
S+ ++I G+A QAL+ F+ +L G+ +++T GAL AC++ G E
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACAS------IRGDLEGR 403
Query: 516 QKE-YKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
Q +K + +C ++DM+ + + EA D M+ + V W+ IA C ++
Sbjct: 404 QVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMME-RRDAVSWNAIIAACEQN 462
Query: 571 GNME--LGFYAAEQLLKLKPKD 590
GN E L +A+ +++P D
Sbjct: 463 GNEEETLAHFASMIHSRMEPDD 484
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/669 (33%), Positives = 366/669 (54%), Gaps = 53/669 (7%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF+ + N++ W +++ G+ +S P A+ +++ M+ G+ P + + L +C+
Sbjct: 17 AISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAK 76
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL--------------------- 226
++ G+QIHA V+K D V SL S+Y+ G L
Sbjct: 77 SKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTAL 136
Query: 227 ----------NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
SA K F+ I E++V+SW +I ENG + L F +M+ ++P+E
Sbjct: 137 ITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDE 196
Query: 277 FTLTSISSVCGTMLSLRVGAQVHS----LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
TL S+ S C S+ +G QVHS G++S+L++ N+++ LY KCG V+ A
Sbjct: 197 GTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFG 256
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+G+S ++V+WN +I G+ N EAL +F ++ SG P+ T
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHT-----------NLYKEALLLFQEMLRSGECPNDVTLL 305
Query: 393 SILTICSRLVALEQGEQIHALTLKT--GFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
S+L C+ L A++ G IH K G ++ + T+L++MY KCG IE A +VF M
Sbjct: 306 SVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSML 365
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R+L SW +MI GFA H ++ A LF M V P+ +TFVG L+ACS++G++
Sbjct: 366 YRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ 425
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
F+ M ++Y + P ++HY C+ID+ G +EA + I M EP+ VIW + C++H
Sbjct: 426 IFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKH 485
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
GN+EL A++L+K++P++ SY +L +I+ +AGRWEDVA V+ + + + + S
Sbjct: 486 GNLELAESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSS 545
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
I + V+ F D LHP+ EI+ +L+E+ + + G+ S L + +E A
Sbjct: 546 IEVDSVVHEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALR 605
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
+HSEKLAIAFGL++T + + +VK+ +CR+CH K+I+ + REI+ RD R H F
Sbjct: 606 HHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFR 665
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 666 DGVCSCCDY 674
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 220/458 (48%), Gaps = 67/458 (14%)
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
LC + L AI F I+E N++ W T++ + + V L + +M+S G PN
Sbjct: 4 LCVVSPHFDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPN 63
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
++ + C + G Q+H+ +KLG + V S++ +Y + G +++A+K+FD
Sbjct: 64 SYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFD 123
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAK-----DDLS--------------AHNGG-TEALSI 375
SH ++V+ A+I G+A D D+++ NG EAL +
Sbjct: 124 ASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALEL 183
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT----GFLSDVVVGTALVN 431
F ++ + ++PD T S+++ C++ ++E G Q+H+ GF S + + AL++
Sbjct: 184 FKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALID 243
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG +E A +F +S + ++SW ++I G+ + +L +AL LF++ML +G PN VT
Sbjct: 244 LYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVT 303
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH---YMCLIDMFVRLGCIE------ 542
+ L AC++ G + +G + + + K+K V + LIDM+ + G IE
Sbjct: 304 LLSVLPACAHLGAI--DIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVF 361
Query: 543 -------------------------EAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNME 574
AFD +M EP+++ + ++ C G ++
Sbjct: 362 NSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLD 421
Query: 575 LG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
LG F + Q L PK E Y ++D+ +G +++
Sbjct: 422 LGRQIFKSMTQDYNLTPK-LEHYGCMIDLLGHSGLFKE 458
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/685 (32%), Positives = 372/685 (54%), Gaps = 42/685 (6%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL+ C S +H K G D FV L+N+Y KCG + A+ VFD +P
Sbjct: 93 SLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPER 152
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSWT+++ YV++ A+ + +M G + V L + + +L ++ G+ +H
Sbjct: 153 DVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVH 212
Query: 199 AYVVKYQTED--DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
Y+V+ ++ + S+ +L +Y G L SA + F+R+ +++V+SWT +I C +
Sbjct: 213 GYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCR 272
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+G + F++ML E + PNE TL S+ + CG + +L +G H+ ++ G+ +L + +
Sbjct: 273 LDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTA 332
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLAKDDLSAHNGGTEALS 374
++ +Y KCG V A+ LF+G+ ++ W+ +I+ +A + MD + +
Sbjct: 333 LIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMD-------------QVFN 379
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ ++ +KP+ T S+L++C+ AL+ G+ HA + G DV++ TAL+NMY
Sbjct: 380 LFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYA 439
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + A +F E R + W +M+ GF+ H +AL+LF +M GV PN +TFV
Sbjct: 440 KCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVS 499
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
ACS++G+ M+HY CL+D+ R G ++EA + I+ M
Sbjct: 500 IFHACSHSGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMR 539
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN +IW +A C+ H N+ LG AA ++L+L P++C + +I+ SA RW DV V+
Sbjct: 540 PNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVR 599
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ + SWI + V+ FK D Q+ ++++++ E+ K + GY +
Sbjct: 600 EAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESGYTPNTA 659
Query: 675 FEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L ++ESA YHSEKLA AFGL++T +PI +VK+ +C DCH K+++ +
Sbjct: 660 AVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATKLLSKIY 719
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R IIVRD R H F G+C+C +
Sbjct: 720 GRTIIVRDRNRFHHFSEGYCSCMGY 744
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 202/421 (47%), Gaps = 37/421 (8%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VRS F EAL ++ E G K+ + +SL+ N + + +H +IV+ +
Sbjct: 165 VRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKM 224
Query: 110 FV--MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
V T L+++Y K G + AQ++FD L + +VVSWT +I+G +++ + + F ML
Sbjct: 225 EVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRML 284
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
E +P +TL + +T C + ++ LGK HAY+++ ++ +L +Y CG +
Sbjct: 285 EEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVG 344
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A FN +++K+V W+ +I A Q F +ML+ ++PN T+ S+ S+C
Sbjct: 345 YARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCA 404
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+L +G H+ + G ++ + +++ +Y KCG V A+ LF+ ++ WN
Sbjct: 405 EAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNT 464
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
M+AG S H G EAL +FS++ S G++P+ TF SI CS +E
Sbjct: 465 MMAG-----------FSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEH- 512
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFAN 466
LV++ + G ++ A + M R I W +++
Sbjct: 513 ------------------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKL 554
Query: 467 H 467
H
Sbjct: 555 H 555
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 118/243 (48%), Gaps = 22/243 (9%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D + S+L C++ + + G ++H K GF SDV V AL+NMY+KCG + A VF
Sbjct: 87 DNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVF 146
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN----- 501
+M R ++SWT+M+ + +AL+L +M GV+ + V + +A N
Sbjct: 147 DQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMK 206
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEV 558
+G GY + K++ M LIDM+ + GC+ A FD + K V
Sbjct: 207 SGRAVH--GYIVRNVGDEKMEVSMT--TALIDMYCKGGCLASAQRLFDRLSKRSV----V 258
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLL--KLKPKDCESYAMLLDI-FVSA---GRWEDVAV 612
W+V IAGC R ++ G ++L KL P + +++ + FV G+W +
Sbjct: 259 SWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYL 318
Query: 613 VKN 615
++N
Sbjct: 319 LRN 321
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 234/700 (33%), Positives = 378/700 (54%), Gaps = 53/700 (7%)
Query: 97 HAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
HA +VKTG H + ++ L+ V + A VF+ N++ W +++ G +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
S + +++ M+ G+ P T L +C+ ++ G+QIHA V+K E D
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 214 NSLCSLYS---------------------TC----------GSLNSAIKAFNRIREKNVM 242
SL S+Y+ +C G + SA K F+ I E++V+
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL- 301
SW +I EN + L F +M+ ++P+E TL S+ S C S+ +G ++H+L
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
G+ S+L++ N+ + LY KCG V+ A LF+G+S ++V+WN +I G+ M
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHM------ 295
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK--TGF 419
N EAL +F ++ SG P+ T S+L C+ L A++ G IH K G
Sbjct: 296 -----NLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGV 350
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+ + T+L++MY KCG IE A +VF M ++L SW +MI GFA H ++ A LF
Sbjct: 351 TNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSR 410
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G+ P+ +T VG L+ACS++G++ F+ + ++Y I P ++HY C+ID+ G
Sbjct: 411 MRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAG 470
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+EA + I M EP+ VIW + C+ HGN+EL A++L++++P++ SY +L +
Sbjct: 471 LFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSN 530
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +AGRWEDVA ++ + + + + S I I V+ F D LHPQS EI+++L+E
Sbjct: 531 IYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEE 590
Query: 660 ---LVEKAKCFGYKQQESFELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L+E+A + E+ +E E A +HSEKLAIAFGL++T + + VVK+ +
Sbjct: 591 MDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTVVKNLRV 650
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CR+CH K+I+ + REI+ RD R H F +G C+C D+
Sbjct: 651 CRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDY 690
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 174/365 (47%), Gaps = 45/365 (12%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA----------- 128
LL+ C K+ IHA ++K G D + T L+++Y + G +E+A
Sbjct: 89 LLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRD 148
Query: 129 --------------------QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+KVFD + +VVSW ++I+GYV+N E A+ +F +M+
Sbjct: 149 VVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMR 208
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT-SVGNSLCSLYSTCGSLN 227
P TL + L+AC+ SI LG++IH V + + + N+ LYS CG +
Sbjct: 209 TNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVE 268
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F + K+V+SW T+IG + L F +ML G PN+ T+ S+ C
Sbjct: 269 IASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACA 328
Query: 288 TMLSLRVGAQVHSLGIKL--GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ ++ +G +H K G + +R S++ +Y KCG ++ A ++F+ M H +L +W
Sbjct: 329 HLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSW 388
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
NAMI G A H A +FS++ +G++PD T +L+ CS L+
Sbjct: 389 NAMIFGFAM-----------HGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLD 437
Query: 406 QGEQI 410
G I
Sbjct: 438 LGRHI 442
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/713 (32%), Positives = 375/713 (52%), Gaps = 25/713 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVN-RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L+E + + VS+ C + R + + +HA+ ++ G + + LV +Y + G
Sbjct: 424 MLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY-TNNALVTMYARLG 482
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ +A+ +F ++VSW ++IS QN + E A+ M+ G P VTL + L
Sbjct: 483 RVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLP 542
Query: 184 ACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
ACS LE +R+G++IH Y ++ +++ VG +L +Y C F+ + + V
Sbjct: 543 ACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVA 602
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W ++ N Q LR F +M+SE PN T S+ C +H
Sbjct: 603 VWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGY 662
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG------HAQM 355
+K G+ + V+N++M +Y + G V+ ++ +F M+ ++V+WN MI G +
Sbjct: 663 IVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDA 722
Query: 356 MDLAKDDLSAHNG--GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
++L + + G G++ + KP+ T ++L C+ L AL +G++IHA
Sbjct: 723 LNLLHE-MQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAY 781
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K DV VG+ALV+MY KCG + ASRVF +M R +I+W +I + H +A
Sbjct: 782 AVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEA 841
Query: 474 LQLFEDMLLAG------VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
L+LF M G +RPN+VT++ AACS++GMV E L F M+ + ++P DH
Sbjct: 842 LELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDH 901
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKL 586
Y CL+D+ R G ++EA++ I M N+V WS + CR H ++E G AA+ L L
Sbjct: 902 YACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVL 961
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P Y ++ +I+ SAG W+ V+ +E + + SWI D+V+ F D
Sbjct: 962 EPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDAS 1021
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTP 701
HPQS E+ + L+ L ++ + GY S + DEE ++ HSE+LAIAFGLLNTP
Sbjct: 1022 HPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTP 1081
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I V K+ +C DCH KII+ + REII+RD +R H F NG C+C D+
Sbjct: 1082 PGTTIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHFANGTCSCGDY 1134
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 178/623 (28%), Positives = 292/623 (46%), Gaps = 87/623 (13%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ ++L+ L + IHAH+ K G V LVN+YGKCG++ A++VFD
Sbjct: 332 AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFD 391
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE-SIR 192
++P + VSW S+I+ + + EL++H+F ML PT+ TL + ACS + +R
Sbjct: 392 DIPDRDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVR 451
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LGKQ+HAY ++ + T N+L ++Y+ G +N A F K+++SW TVI +
Sbjct: 452 LGKQVHAYTLR-NGDLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLS 510
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNL 311
+N + L + M+ +G++P+ TL S+ C + LR+G ++H ++ G N
Sbjct: 511 QNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENS 570
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V +++ +Y C + + +FDG+ + WNA++AG+A+ DD +
Sbjct: 571 FVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARN---EFDD--------Q 619
Query: 372 ALSIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
AL +F ++ S S P+ TF+S+L C R E IH +K GF D V AL+
Sbjct: 620 ALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALM 679
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-------- 482
+MY + GR+E + +F M+ R ++SW +MITG AL L +M
Sbjct: 680 DMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSD 739
Query: 483 --------AGV--RPNQVTFVGALAACSNAGMVYEALGYF-EMMQKEYKIKPVMDHYM-- 529
GV +PN VT + L C+ ALG E+ K K MD +
Sbjct: 740 TFVDYEDDGGVPFKPNSVTLMTVLPGCA----ALAALGKGKEIHAYAVKQKLAMDVAVGS 795
Query: 530 CLIDMFVRLGCI-------------------------------EEAFDFIKKMD------ 552
L+DM+ + GC+ EEA + + M
Sbjct: 796 ALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSN 855
Query: 553 ---FEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
PNEV + A C G ++ G F+ + ++P+ + YA L+D+ +GR
Sbjct: 856 REVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRG-DHYACLVDLLGRSGR 914
Query: 607 WEDVAVVKNLTREEKLSETDDWS 629
++ + N T L++ D WS
Sbjct: 915 VKEAYELIN-TMPSNLNKVDAWS 936
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/578 (34%), Positives = 342/578 (59%), Gaps = 16/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ + + GK HA ++ + D N L ++YS CGS++ A + F+ + +++
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+IG+ +NGE + L +M EG +EFT++S+ C +L +H+
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK N+ V +++ +Y KCGL+ +A +F+ M ++VTW++M AG+ Q
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ------- 243
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ +AL++F K +G+K D + SS++ C+ L A+ +G+Q++AL K+GF S
Sbjct: 244 ----NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCS 299
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
++ V ++L++MY KCG IE + +VF ++ R ++ W +MI+G + H+ S + + LFE M
Sbjct: 300 NIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQ 359
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ PN VTFV L+AC + G+V + YF++M KE+ + P + HY C++D R G I
Sbjct: 360 QMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQI 419
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA+D I K+ F + +W +A CR HGN+EL AA++L ++P + +Y +L +++
Sbjct: 420 FEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMY 479
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+ G+W++VA ++ L +E + + SWI IKDKV+ F + HP+ EI+ L+E++
Sbjct: 480 AANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVM 539
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
++ + GYK + +L ++ +HSEKLA GLL P +PI ++K+ +C
Sbjct: 540 DELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICG 599
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+F+K+ + R++IVRD+ R H F NG C+C DF
Sbjct: 600 DCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDF 637
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 212/411 (51%), Gaps = 19/411 (4%)
Query: 65 VLTEGPKVQ--TSSYVSLLQE----CVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
V E P + +++VS + E C RK L + HA I+ G D L+N+
Sbjct: 49 VECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINM 108
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG+++ A++VFD +P ++VSW ++I QN + A+ + L M G + T+
Sbjct: 109 YSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTI 168
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L AC++ ++ + +HA+ +K + + V +L +Y+ CG + A+ F + +
Sbjct: 169 SSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD 228
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V++W+++ +N Q L F K G++ ++F ++S+ C + ++ G QV
Sbjct: 229 RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQV 288
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++L K G+ SN+ V +S++ +Y KCG ++E+ K+F + N+V WNAMI+G
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISG------- 341
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
LS H E + +F K+ G+ P+ TF S+L+ C + +++G++ L K
Sbjct: 342 ----LSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEH 397
Query: 419 FLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
L+ +V + +V+ + G+I A + ++ S W S++ H
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTH 448
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 166/327 (50%), Gaps = 14/327 (4%)
Query: 61 EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL +L EG + S+L C + +LS +++HA +K + FV T L+
Sbjct: 148 EALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALL 207
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+VY KCG M++A VF+++P +VV+W+S+ +GYVQN E A+ +F E G
Sbjct: 208 DVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQF 267
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + + AC+ L ++ GKQ++A + K + V +SL +Y+ CG + + K F +
Sbjct: 268 LMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV 327
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++NV+ W +I + +++ + F KM G+ PN+ T S+ S CG M ++ G
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVKKGQ 387
Query: 297 QVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA---- 350
+ L K + A N+ + ++ + G + EA L + + + W +++A
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 351 -GHAQMMDLAKD---DLSAHNGGTEAL 373
G+ ++ ++A D+ HN G L
Sbjct: 448 HGNLELAEVAAKKLFDIEPHNSGNYLL 474
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL +C++ L QG+ HA L G +D++ L+NMY KCG ++ A +VF EM +R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L+SW +MI + ++AL L M G ++ T L AC+ + E
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC----- 184
Query: 514 MMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ + IK MD + L+D++ + G +++A + M + + V WS AG
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSMAAG 240
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/707 (32%), Positives = 381/707 (53%), Gaps = 21/707 (2%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
S G + L EG ++ V+++ C + + + H +K G + V + L
Sbjct: 281 SYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSL 340
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG + EA+ +FD + NV+SW S+I GY ++ A + M N
Sbjct: 341 LDMYSKCGYLCEARVLFDTNEK-NVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVN 399
Query: 176 -VTLGTALTACSS-LESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKA 232
VTL L C ++ ++L K+IH Y +++ + D V N+ + Y+ CGSL+ A
Sbjct: 400 EVTLLNVLPVCEEEIQFLKL-KEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F + K V SW +IG +NG + L + M G++P+ FT+ S+ S C + SL
Sbjct: 459 FCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSL 518
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G ++H ++ G+ + + S++ LY++CG + A+ FD M NLV WN MI G
Sbjct: 519 SCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGF 578
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+Q + +AL +F ++ SS + PD + L CS++ AL G+++H
Sbjct: 579 SQ-----------NEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHC 627
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+K+ V +L++MY KCG +E++ +F + + ++W +ITG+ H +
Sbjct: 628 FAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRK 687
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
A++LF+ M AG RP+ VTF+ L AC++AG+V E L Y MQ + IKP ++HY C++
Sbjct: 688 AIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVV 747
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
DM R G + EA + + ++ +P+ IWS ++ CR + ++++G A +LL+L P E
Sbjct: 748 DMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAE 807
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
+Y ++ + + G+W++V ++ +E L + SWI I KV F D QS +
Sbjct: 808 NYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMK 867
Query: 653 IFKVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPIL 707
I + EL +K GYK S EL ++E + HSEKLAI+FGLLNT + +
Sbjct: 868 IQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFGLLNTAKGTTLR 927
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
V K+ +C DCHN IK+++ + REIIVRD+KR H F NG C+C D+
Sbjct: 928 VCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDY 974
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/498 (30%), Positives = 261/498 (52%), Gaps = 30/498 (6%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ C K++ IH I + Q D ++T LV +Y C + ++ VF+ R
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W +L+SGY++NS A+ VF++M+ + P N TL + AC + +RLG+ +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H + +K + D VGN+L ++Y G + SA+K F+++ ++N++SW +V+ AC ENG
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVF 278
Query: 258 VQGLRFFSKMLS--EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ F +L+ EG+ P+ T+ ++ +C +R+G H L +KLG L+V +
Sbjct: 279 EESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNS 338
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ +Y KCG + EA+ LFD + N+++WN+MI G+++ D A +
Sbjct: 339 SLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRG-----------AFEL 386
Query: 376 FSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMY 433
K+ +K + T ++L +C + + ++IH L+ GF+ SD +V A V Y
Sbjct: 387 LRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGY 446
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG + A VF M ++ + SW ++I G + +AL L+ M +G+ P+ T
Sbjct: 447 AKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIA 506
Query: 494 GALAACSNAGMV---YEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFI 548
L+AC+ + E G M++ ++ +D ++C L+ ++V+ G I A F
Sbjct: 507 SLLSACARLKSLSCGKEIHG--SMLRNGFE----LDEFICISLVSLYVQCGKILLAKLFF 560
Query: 549 KKMDFEPNEVIWSVFIAG 566
M+ E N V W+ I G
Sbjct: 561 DNME-EKNLVCWNTMING 577
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/628 (34%), Positives = 353/628 (56%), Gaps = 38/628 (6%)
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
S P A++ + M + + + + L ACS + R+GK+IH + VK D V
Sbjct: 88 SHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVV 147
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC-----GENGEAV---------- 258
N+L +YS CGSL SA F+++ E++V+SW+T+I A G + ++
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGY 207
Query: 259 -------QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+G R F +M+ E + PN+ T+ S+ CG + ++++G ++H+ ++ G+ +L
Sbjct: 208 IRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ +++ +Y KCG + A+ +FD M + +++TW AMI+ +AQ N
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQA-----------NCIDY 316
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A +F ++ +G++P+ T S+L++C+ AL+ G+ HA K G DV++ TAL++
Sbjct: 317 AFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALID 376
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG I A R+F E R + +W M+ G+ H +AL+LF +M GV+PN +T
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+GAL ACS+AG+V E G FE M ++ + P ++HY C++D+ R G ++EA+ I+ M
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM 496
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
PN IW +A C+ H N +G AA +LL L+P++C ++ +I+ +A RW DVA
Sbjct: 497 PVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVA 556
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
++ ++ + + S I + V+ FK D HP +I ++L E+ +K K GY
Sbjct: 557 GMRKAVKDTGIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLP 616
Query: 672 QESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
S L ++E+A YHSEKLA+AFGL++T +PI VVK+ +C DCH K+++
Sbjct: 617 DTSVVLHNIDEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLS 676
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ R IIVRD R H F G C+C +
Sbjct: 677 KIYKRVIIVRDRNRFHHFREGSCSCGGY 704
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 212/426 (49%), Gaps = 37/426 (8%)
Query: 72 VQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
++ S++ S+L+ C + IH VK G D FV+ L+ +Y +CG++ A+
Sbjct: 105 IEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSAR 164
Query: 130 KVFDNLPRINVVSW----------------------TSLISGYVQNSQPELAIHVFLDML 167
+FD + +VVSW T++I+GY++ + E +F+ M+
Sbjct: 165 LLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
E +P ++T+ + + +C + +++LGK++HAY+++ ++ +L +Y CG +
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIR 284
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
SA F+ ++ K+VM+WT +I A + + F +M G++PNE T+ S+ S+C
Sbjct: 285 SARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCA 344
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+L +G H+ K G ++ ++ +++ +Y KCG + AQ+LF ++ TWN
Sbjct: 345 VNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNV 404
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
M+AG+ H G +AL +F+++ + G+KP+ TF L CS + +G
Sbjct: 405 MMAGYGM-----------HGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEG 453
Query: 408 EQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFA 465
+ + + G + V +V++ + G ++ A ++ M T + W +M+
Sbjct: 454 KGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACK 513
Query: 466 NHSLSH 471
H S+
Sbjct: 514 IHKNSN 519
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
FQ + + G + + VSLL C +L + HA+I K G D + T L++
Sbjct: 317 AFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALID 376
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG++ AQ++F ++ +W +++GY + E A+ +F +M G P ++T
Sbjct: 377 MYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDIT 436
Query: 178 LGTALTACSSLESIRLG-----KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
AL ACS + G K IH + + + E + L G L+ A K
Sbjct: 437 FIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEH----YGCMVDLLGRAGLLDEAYKM 492
Query: 233 FNRIR-EKNVMSWTTVIGAC 251
+ N+ W ++ AC
Sbjct: 493 IESMPVTPNIAIWGAMLAAC 512
>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Vitis vinifera]
Length = 882
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/730 (31%), Positives = 381/730 (52%), Gaps = 54/730 (7%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+ G ++ S+V++L C+ L +HA ++K G FV L+ +YGKCG ++
Sbjct: 164 SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD 223
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTAC 185
++FD +P ++ SW ++IS V+ E A +F DM + + TL T L A
Sbjct: 224 SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAA 283
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
L S+ +G++IHA+V+K E + SV N+L Y+ CGS+ + F ++R ++V++WT
Sbjct: 284 RGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWT 342
Query: 246 TVIGACGE-------------------------------NGEAVQGLRFFSKMLSEGIQP 274
+I A E NGE + L FF +M+ EG++
Sbjct: 343 EMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVEL 402
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+FTLT + + CG ++ ++ Q+H +K G+ SN + +++ + +CG + +AQK+F
Sbjct: 403 TDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMF 462
Query: 335 DGMSHVNL--VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTF 391
S + W +MI G+A+ + EA+S+F + G M D
Sbjct: 463 SQGSFSQSGSIIWTSMICGYAR-----------NAQPEEAISLFCQSQLEGAMVVDKVAS 511
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+++L +C L E G+QIH LK+GFLSD+ VG +++ MY KC ++ A +VF M
Sbjct: 512 TAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA 571
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--SNAGMVYEAL 509
++SW +I G H +AL ++ M AG++P+ VTFV ++A +N+ +V
Sbjct: 572 HDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCR 631
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F M+ Y I P ++HY L+ + G +EEA + I KM EP +W + CR
Sbjct: 632 RLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRI 691
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H N +G AA+ LL +KP D +Y ++ +++ + GRW +V+ R + + S
Sbjct: 692 HSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRS 751
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS----- 684
WI ++KV+SF D HPQ+ +I L+ L+ + GY SF L + E
Sbjct: 752 WIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFL 811
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
YHS K+A +GLL T PI +VK+ +C DCH F+K ++ +T REI +RD+ H F
Sbjct: 812 FYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCF 871
Query: 745 VNGHCTCRDF 754
+NG C+C+D+
Sbjct: 872 LNGQCSCKDY 881
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 279/593 (47%), Gaps = 57/593 (9%)
Query: 64 SVLTEGPKVQTSS---YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
++L+ P V + + LL V + + +HA I K +D + L+ Y
Sbjct: 59 ALLSNFPSVSNDTVNDHYYLLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYL 116
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
K G + A KVF L NVVS+T++ISG+ ++++ A+ +F M +G +
Sbjct: 117 KLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVA 176
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
LT C L + LG Q+HA V+K + T V N+L LY CG L+S ++ F+ + ++
Sbjct: 177 ILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRD 236
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ SW TVI + + + F M +G + + FTL++I V L+ VG ++H
Sbjct: 237 IASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTI-LVAARGLASMVGREIH 295
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMD 357
+ IK+G+ SN+ V N+++ Y KCG + LF+ M +++TW MI + + + D
Sbjct: 296 AHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTD 355
Query: 358 LAK---DDLSAHNG---------------GTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
LA D + A N G++AL+ F ++ G++ +T + +L C
Sbjct: 356 LALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACG 415
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV--FVEMSTRTLISW 457
L+ + +QIH LK GF S+ + AL++M +CGR+ A ++ S I W
Sbjct: 416 LLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIW 475
Query: 458 TSMITGFANHSLSHQALQLF-EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
TSMI G+A ++ +A+ LF + L + ++V L C F M
Sbjct: 476 TSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLA--------FHEMG 527
Query: 517 KEYKIKPVMDHYM-------CLIDMFVRLGCIEEAFDFIKKMDFEPNE--VIWSVFIAG- 566
K+ + ++ +I M+ + +++A IK + P V W+ IAG
Sbjct: 528 KQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA---IKVFNVMPAHDIVSWNGLIAGH 584
Query: 567 -CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
R G+ L ++ + +KP D ++ ++ +SA R + +V N R
Sbjct: 585 LLHRQGDEALSVWSKMEKAGIKP-DTVTFVLI----ISAYRHTNSNLVDNCRR 632
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 220/685 (32%), Positives = 373/685 (54%), Gaps = 20/685 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S+ S+L++ + K L IHA I+ +G + F+ L+N Y CG + +A+++F +
Sbjct: 26 SHASILRKLKDLKPLQQ---IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P NVVSWT LISG +N AI VF +M P VT+ + L A ++L IR+ K
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+H + V+ E + V +L +YS G + A + F + E+NV+SW ++ ++G
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHG 202
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + + F+ M +G+ + +T+ S+ ++ L+VG +H I+ GY ++ ++
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++M +Y+ VD+A ++F M ++ W M+ G S+ A+
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTG-----------FSSGRHWDRAIKH 311
Query: 376 FSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F+K L +K D IL+ CS AL+QG ++HAL +KT F +++ VG+A+++MY
Sbjct: 312 FNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYA 371
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
CG +E A R F M + ++ W +MI G + A+ LF M +G+ P++ TFV
Sbjct: 372 NCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVS 431
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+AGMVYE L F M K P + HY C+ID+ R G ++ A+ FI M F+
Sbjct: 432 VLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQ 491
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ ++S + CR HGN++LG ++++ +++P D Y +L +++ AG WE V + +
Sbjct: 492 PDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTR 551
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
R ++L + +S I I ++Y+F + HPQ +I +L L+ K K GY +
Sbjct: 552 ASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTN 611
Query: 675 FELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L D ++ +HSEK+AIAFGL+ T + I + K+ C DCH+ K ++ +
Sbjct: 612 VLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFVSKVF 671
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R ++++D+ R H F +G C+CRD+
Sbjct: 672 GRVLVIKDANRFHVFQDGVCSCRDY 696
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 139/287 (48%), Gaps = 7/287 (2%)
Query: 58 GF-QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF +EA+ + +G V + +SL+ ++ L IH I++TG D +
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK 261
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T L+++Y +++A +VF + +V +WT +++G+ + AI F ML N
Sbjct: 262 TALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNL 321
Query: 173 PTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
+ + L L++CS +++ G+++HA +K ++ VG+++ +Y+ CG+L A +
Sbjct: 322 KLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKR 381
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F + EK+V+ W +I G NG + F +M G+ P+E T S+ C
Sbjct: 382 FFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGM 441
Query: 292 LRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ G Q+ +K + NL+ ++ + + G +D A + M
Sbjct: 442 VYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNM 488
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K+ + + +L C + +L +HA +KT + FV + ++++Y CGN+E+A++
Sbjct: 322 KLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKR 381
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
F + +VV W ++I+G N AI +FL M +G P T + L ACS
Sbjct: 382 FFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGM 441
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EKNVMSWTTV 247
+ G QI ++VK + D ++ + C + G L++A N + + + ++T+
Sbjct: 442 VYEGLQIFYHMVK-TSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTL 500
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+GAC +G G K+ ++PN+
Sbjct: 501 LGACRIHGNIKLGHEISQKIFE--MEPND 527
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/578 (34%), Positives = 342/578 (59%), Gaps = 16/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ + + GK HA ++ + D N L ++YS CGS++ A + F+ + +++
Sbjct: 71 LKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRSL 130
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+IG+ +NGE + L +M EG +EFT++S+ C +L +H+
Sbjct: 131 VSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAF 190
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK N+ V +++ +Y KCGL+ +A +F+ M ++VTW++M AG+ Q
Sbjct: 191 AIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQ------- 243
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ +AL++F K +G+K D + SS++ C+ L A+ +G+Q++AL K+GF S
Sbjct: 244 ----NEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCS 299
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
++ V ++L++MY KCG IE + +VF ++ R ++ W +MI+G + H+ S + + LFE M
Sbjct: 300 NIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQ 359
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ PN VTFV L+AC + G+V + YF++M KE+ + P + HY C++D R G I
Sbjct: 360 QMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQI 419
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA+D I K+ F + +W +A CR HGN+EL AA++L ++P + +Y +L +++
Sbjct: 420 FEAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMY 479
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+ G+W++VA ++ L +E + + SWI IKDKV+ F + HP+ EI+ L+E++
Sbjct: 480 AANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVM 539
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
++ + GYK + +L ++ +HSEKLA GLL P +PI ++K+ +C
Sbjct: 540 DELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICG 599
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+F+K+ + R++IVRD+ R H F NG C+C DF
Sbjct: 600 DCHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDF 637
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 211/411 (51%), Gaps = 19/411 (4%)
Query: 65 VLTEGPKVQ--TSSYVSLLQE----CVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
V E P + +++VS + E C RK L + HA I+ G D L+N+
Sbjct: 49 VECEKPTTKDFNATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINM 108
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG+++ A++VFD +P ++VSW ++I QN + A+ + L M G + T+
Sbjct: 109 YSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTI 168
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L AC++ ++ + +HA+ +K + + V +L +Y+ CG + A+ F + +
Sbjct: 169 SSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD 228
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V++W+++ +N Q L F K G++ ++F ++S+ C + ++ G Q+
Sbjct: 229 RSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQM 288
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
++L K G+ SN+ V +S++ +Y KCG ++E+ K+F + N+V WNAMI+G
Sbjct: 289 NALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISG------- 341
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
LS H E + +F K+ G+ P+ TF S+L+ C + + +G++ L K
Sbjct: 342 ----LSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEH 397
Query: 419 FLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
L+ +V + +V+ + G+I A + ++ S W S++ H
Sbjct: 398 HLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRTH 448
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 166/327 (50%), Gaps = 14/327 (4%)
Query: 61 EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL +L EG + S+L C + +LS +++HA +K + FV T L+
Sbjct: 148 EALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHAFAIKAAMDLNVFVATALL 207
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+VY KCG M++A VF+++P +VV+W+S+ +GYVQN E A+ +F E G
Sbjct: 208 DVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQF 267
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + + AC+ L ++ GKQ++A + K + V +SL +Y+ CG + + K F +
Sbjct: 268 LMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV 327
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++NV+ W +I + +++ + F KM G+ PN+ T S+ S CG M +R G
Sbjct: 328 EKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQ 387
Query: 297 QVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA---- 350
+ L K + A N+ + ++ + G + EA L + + + W +++A
Sbjct: 388 KYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWGSLLASCRT 447
Query: 351 -GHAQMMDLAKD---DLSAHNGGTEAL 373
G+ ++ ++A D+ HN G L
Sbjct: 448 HGNLELAEVAAKKLFDIEPHNSGNYLL 474
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL +C++ L QG+ HA L G +D++ L+NMY KCG ++ A +VF EM +R+
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L+SW +MI + ++AL L M G ++ T L AC+ + E
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSEC----- 184
Query: 514 MMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ + IK MD + L+D++ + G +++A + M + + V WS AG
Sbjct: 185 QLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMP-DRSVVTWSSMAAG 240
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 340/593 (57%), Gaps = 16/593 (2%)
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
LE G + T + AC L+SIR K++ Y+V E D + N + ++ CG +
Sbjct: 124 LEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMM 183
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A + F+ + +N +SW T+I ++G V+ R F M E T ++
Sbjct: 184 IDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRAS 243
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ + G Q+HS IK G ++ V +++ +Y KCG +++A +FD M +V WN
Sbjct: 244 AGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWN 303
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
++IAG+A H EAL ++ ++ SG+K D +TFS I+ ICSRL ++ +
Sbjct: 304 SIIAGYA-----------LHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVAR 352
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
+Q+HA ++ GF DVV TALV+ Y K G+++ A VF MS R +ISW ++I G+ N
Sbjct: 353 AKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN 412
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H +A+ +FE ML G+ PN VTF+ L+ACS +G+ F+ M +++K+KP
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAM 472
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
H+ C+I++ R G ++EA+ I+K F+P +W+ + CR HGN+ELG +AAE+L +
Sbjct: 473 HFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAAEKLYGM 532
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P+ +Y +LL+I+ S+G+ ++ A V + + L SWI + ++ ++F D
Sbjct: 533 EPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKGLRMLPACSWIEVNNQPHAFLSGDKH 592
Query: 647 HPQSAEIFKVLDELVEKAKCFGY-KQQESFELTD----EESASVYHSEKLAIAFGLLNTP 701
H Q ++ +DEL+ GY ++++F L D EE +YHSEKLAIA+GLLNT
Sbjct: 593 HVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDVDENEEKIRMYHSEKLAIAYGLLNTL 652
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+P+ +V+S +C DCH+ IK+I +T REI++RD+ R H F +G C+C D+
Sbjct: 653 EKTPLQIVQSHRICSDCHSVIKLIAMITKREIVIRDASRFHHFRDGSCSCGDY 705
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 229/456 (50%), Gaps = 16/456 (3%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L +G V S+Y +L+ C+ KS+ + + ++V G D ++ ++ ++ KCG M
Sbjct: 124 LEDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMM 183
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A ++FD +P N VSW ++ISGYV + A +F+ M E T T + A
Sbjct: 184 IDACRLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRAS 243
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ LE I G+Q+H+ +K D V +L +YS CGSL A F+ + +K ++ W
Sbjct: 244 AGLEIIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWN 303
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
++I +G + + L + +M G++ + FT + I +C + S+ QVH+ ++
Sbjct: 304 SIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRN 363
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G+ ++ +++ Y K G VD+A+ +FD MS N+++WNA+IAG+
Sbjct: 364 GFGLDVVANTALVDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGN----------- 412
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVV 424
H G EA+ +F K+ GM P+ TF ++L+ CS E+G +I ++T +
Sbjct: 413 HGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISGLFERGWEIFQSMTRDHKVKPRAM 472
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLA 483
++ + + G ++ A + + + T W +++ H + L F L
Sbjct: 473 HFACMIELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVH--GNLELGKFAAEKLY 530
Query: 484 GVRPNQVT-FVGALAACSNAGMVYEALGYFEMMQKE 518
G+ P +++ ++ L +++G + EA F+ ++++
Sbjct: 531 GMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRK 566
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E G K+ ++ +++ C S++ A+ +HA +V+ G D T L
Sbjct: 316 EEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTAL 375
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V+ Y K G +++A+ VFD + N++SW +LI+GY + E AI +F ML G P +
Sbjct: 376 VDFYSKWGKVDDARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNH 435
Query: 176 VTLGTALTACS 186
VT L+ACS
Sbjct: 436 VTFLAVLSACS 446
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/711 (31%), Positives = 376/711 (52%), Gaps = 66/711 (9%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
GP T Y ++Q C R + IH H++K G D +V L+N+Y CGNM +A
Sbjct: 138 GPDNYT--YPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDA 195
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+K+FD P ++ VSW S+++GYV+ E A +F M
Sbjct: 196 RKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM---------------------- 233
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ + NS+ L G + A K FN + EK+++SW+ +I
Sbjct: 234 -----------------PQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALI 276
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG + L F +M + G++ +E + S+ S C + ++ G +H L I++G
Sbjct: 277 SGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIE 336
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ---------MMDL- 358
S + ++N+++++Y G + +AQKLF+G +++ ++WN+MI+G + + D+
Sbjct: 337 SYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVM 396
Query: 359 -AKDDLS---------AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
KD +S H+ +E L++F ++ ++PD S+++ C+ L AL+QG+
Sbjct: 397 PEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGK 456
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+HA K G +V++GT L++MY KCG +E A VF M + + SW ++I G A +
Sbjct: 457 WVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNG 516
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L ++L +F +M GV PN++TF+G L AC + G+V E +F M +++ I+P + HY
Sbjct: 517 LVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHY 576
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G + EA I+ M P+ W + C++HG+ E+G +L++L+P
Sbjct: 577 GCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQP 636
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ +L +IF S G WEDV V+ + +++ + +T S I V+ F D HP
Sbjct: 637 DHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHP 696
Query: 649 QSAEIFKVLDELVEKAKCFGYK---QQESFELTDEESASVY--HSEKLAIAFGLLNTPIV 703
++ +L+E+ ++ K GY + S ++ +EE + HSEKLAIAFGLL
Sbjct: 697 WINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPP 756
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+PI ++K+ +C DCH K+I+ AREI+VRD R H F G C+C D+
Sbjct: 757 TPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDY 807
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 198/432 (45%), Gaps = 86/432 (19%)
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L+ +++ F+RI N W T++ A ++ A + L + M+ + P+ +T +
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C L G ++H +K+G+ S++ V+N+++ +Y CG + +A+KLFD ++ V+W
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 346 NAMIAGHAQMMDL------------------------------------------AKDDL 363
N+++AG+ + D+ KD +
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMV 270
Query: 364 S--------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S NG E AL +F ++N++GM+ D S+L+ C+ L ++ G+ IH L
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330
Query: 415 LKTGFLSDVVVGTALVNMYK-------------------------------KCGRIERAS 443
++ G S V + AL++MY KCG +E+A
Sbjct: 331 IRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKAR 390
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+F M + ++SW+++I+G+A H + L LF +M L +RP++ V ++AC++
Sbjct: 391 ALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLA 450
Query: 504 MVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
+ + ++K K+ ++ L+DM+++ GC+E A + M+ E W+
Sbjct: 451 ALDQGKWVHAYIRKNGLKVNVILG--TTLLDMYMKCGCVENALEVFNGME-EKGVSSWNA 507
Query: 563 FIAGCRRHGNME 574
I G +G +E
Sbjct: 508 LIIGLAVNGLVE 519
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/644 (34%), Positives = 341/644 (52%), Gaps = 18/644 (2%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K + E A+ V P NVVSWTSLISG QN A+ F +M G P + T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
A A +SL GKQIHA VK D VG S +Y + A K F+ I
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
E+N+ +W I +G + + F + PN T + + C L L +G Q
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H L ++ G+ +++ V N ++ Y KC + ++ +F M N V+W +++A + Q +
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
K A ++ + ++ + SS+L+ C+ + LE G IHA +K
Sbjct: 241 DEK-----------ASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 289
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
+ VG+ALV+MY KCG IE + + F EM + L++ S+I G+A+ AL LF
Sbjct: 290 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 349
Query: 478 EDMLLAGV--RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
E+M G PN +TFV L+ACS AG V + F+ M+ Y I+P +HY C++DM
Sbjct: 350 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 409
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G +E A++FIKKM +P +W CR HG +LG AAE L KL PKD ++
Sbjct: 410 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 469
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L + F +AGRW + V+ + + + +SWI +K++V++F+ D H + EI
Sbjct: 470 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 529
Query: 656 VLDELVEKAKCFGYKQQESFELTD----EESASV-YHSEKLAIAFGLLNTPIVSPILVVK 710
L +L + + GYK L D E++A V +HSEKLA+AFGLL+ P+ PI + K
Sbjct: 530 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITK 589
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+F K ++ REIIVRD+ R H+F +G C+C+D+
Sbjct: 590 NLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDY 633
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 17/391 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA VK G D FV ++Y K ++A+K+FD +P N+ +W + IS V + +
Sbjct: 80 IHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGR 139
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P AI F++ +P ++T L ACS + LG Q+H V++ + D SV N
Sbjct: 140 PREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNG 199
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L Y C + S+ F + KN +SW +++ A +N E + + + + ++ +
Sbjct: 200 LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETS 259
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+F ++S+ S C M L +G +H+ +K + V ++++ +Y KCG ++++++ FD
Sbjct: 260 DFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFD 319
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKL--NSSGMKPDLYTFS 392
M NLVT N++I G+ AH G + AL++F ++ G P+ TF
Sbjct: 320 EMPEKNLVTRNSLIGGY------------AHQGQVDMALALFEEMAPRGCGPTPNYMTFV 367
Query: 393 SILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+L+ CSR A+E G +I ++ G + +V+M + G +ERA +M
Sbjct: 368 SLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPI 427
Query: 452 RTLIS-WTSMITGFANHSLSHQALQLFEDML 481
+ IS W ++ H L E++
Sbjct: 428 QPTISVWGALQNACRMHGKPQLGLLAAENLF 458
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 21/321 (6%)
Query: 60 QEALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ E ++ + ++ + L C + L+ +H ++++G D V L
Sbjct: 141 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 200
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL----DMLEAGN 171
++ YGKC + ++ +F + N VSW SL++ YVQN + E A ++L D++E +
Sbjct: 201 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 260
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
+ + + L+AC+ + + LG+ IHA+ VK E VG++L +Y CG + + +
Sbjct: 261 F----MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 316
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI--QPNEFTLTSISSVCGTM 289
AF+ + EKN+++ ++IG G+ L F +M G PN T S+ S C
Sbjct: 317 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 376
Query: 290 LSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNA 347
++ G ++ S+ G + I+ + + G+V+ A + M + W A
Sbjct: 377 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 436
Query: 348 M-----IAGHAQMMDLAKDDL 363
+ + G Q+ LA ++L
Sbjct: 437 LQNACRMHGKPQLGLLAAENL 457
>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/730 (31%), Positives = 381/730 (52%), Gaps = 54/730 (7%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+ G ++ S+V++L C+ L +HA ++K G FV L+ +YGKCG ++
Sbjct: 182 SSGIELNEFSFVAILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLD 241
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTAC 185
++FD +P ++ SW ++IS V+ E A +F DM + + TL T L A
Sbjct: 242 SVLQLFDEMPHRDIASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTILVAA 301
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
L S+ +G++IHA+V+K E + SV N+L Y+ CGS+ + F ++R ++V++WT
Sbjct: 302 RGLASM-VGREIHAHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWT 360
Query: 246 TVIGACGE-------------------------------NGEAVQGLRFFSKMLSEGIQP 274
+I A E NGE + L FF +M+ EG++
Sbjct: 361 EMITAYMEFGLTDLALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVEL 420
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+FTLT + + CG ++ ++ Q+H +K G+ SN + +++ + +CG + +AQK+F
Sbjct: 421 TDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMF 480
Query: 335 DGMSHVNL--VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTF 391
S + W +MI G+A+ + EA+S+F + G M D
Sbjct: 481 SQGSFSQSGSIIWTSMICGYAR-----------NAQPEEAISLFCQSQLEGAMVVDKVAS 529
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+++L +C L E G+QIH LK+GFLSD+ VG +++ MY KC ++ A +VF M
Sbjct: 530 TAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDAIKVFNVMPA 589
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--SNAGMVYEAL 509
++SW +I G H +AL ++ M AG++P+ VTFV ++A +N+ +V
Sbjct: 590 HDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISAYRHTNSNLVDNCR 649
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F M+ Y I P ++HY L+ + G +EEA + I KM EP +W + CR
Sbjct: 650 RLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEEMINKMPIEPEASVWRALLDACRI 709
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H N +G AA+ LL +KP D +Y ++ +++ + GRW +V+ R + + S
Sbjct: 710 HSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGRWHCSDMVREEMRVKGFRKHPGRS 769
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS----- 684
WI ++KV+SF D HPQ+ +I L+ L+ + GY SF L + E
Sbjct: 770 WIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLKAGYVPDTSFVLHEVEEHQKKDFL 829
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
YHS K+A +GLL T PI +VK+ +C DCH F+K ++ +T REI +RD+ H F
Sbjct: 830 FYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTFLKYVSIVTGREIFLRDASGHHCF 889
Query: 745 VNGHCTCRDF 754
+NG C+C+D+
Sbjct: 890 LNGQCSCKDY 899
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 279/593 (47%), Gaps = 57/593 (9%)
Query: 64 SVLTEGPKVQTSS---YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
++L+ P V + + LL V + + +HA I K +D + L+ Y
Sbjct: 77 ALLSNFPSVSNDTVNDHYYLLDLSVRYDDVELIKAVHASIFKLA--EDIHLANALIVAYL 134
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
K G + A KVF L NVVS+T++ISG+ ++++ A+ +F M +G +
Sbjct: 135 KLGMVPNAYKVFVGLSCPNVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVA 194
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
LT C L + LG Q+HA V+K + T V N+L LY CG L+S ++ F+ + ++
Sbjct: 195 ILTVCIRLLDLELGCQLHAIVIKMGFLNYTFVSNALMGLYGKCGYLDSVLQLFDEMPHRD 254
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ SW TVI + + + F M +G + + FTL++I V L+ VG ++H
Sbjct: 255 IASWNTVISSVVKEMMYERAFELFRDMRRIDGFRIDHFTLSTI-LVAARGLASMVGREIH 313
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMD 357
+ IK+G+ SN+ V N+++ Y KCG + LF+ M +++TW MI + + + D
Sbjct: 314 AHVIKIGFESNISVINALIRFYTKCGSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTD 373
Query: 358 LAK---DDLSAHNG---------------GTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
LA D + A N G++AL+ F ++ G++ +T + +L C
Sbjct: 374 LALEVFDKMPARNSISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACG 433
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV--FVEMSTRTLISW 457
L+ + +QIH LK GF S+ + AL++M +CGR+ A ++ S I W
Sbjct: 434 LLMEAKISKQIHGFILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIW 493
Query: 458 TSMITGFANHSLSHQALQLF-EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
TSMI G+A ++ +A+ LF + L + ++V L C F M
Sbjct: 494 TSMICGYARNAQPEEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLA--------FHEMG 545
Query: 517 KEYKIKPVMDHYM-------CLIDMFVRLGCIEEAFDFIKKMDFEPNEVI--WSVFIAG- 566
K+ + ++ +I M+ + +++A IK + P I W+ IAG
Sbjct: 546 KQIHCHALKSGFLSDLGVGNSIITMYSKCSNMDDA---IKVFNVMPAHDIVSWNGLIAGH 602
Query: 567 -CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
R G+ L ++ + +KP D ++ ++ +SA R + +V N R
Sbjct: 603 LLHRQGDEALSVWSKMEKAGIKP-DTVTFVLI----ISAYRHTNSNLVDNCRR 650
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/743 (31%), Positives = 382/743 (51%), Gaps = 69/743 (9%)
Query: 81 LQECVNRK--SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ---KVFDNL 135
L +C++ SLS A HA I++ D + T L++ Y ++ Q + +L
Sbjct: 5 LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P + S++SLI + ++ + F + P L +A+ +C+SL ++ G+
Sbjct: 65 PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR------------------ 237
Q+HA+ D+ V +SL +Y C + A K F+R+
Sbjct: 125 QLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLG 184
Query: 238 -----------------EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
E N++SW ++ G NG + + F ML +G P+ T++
Sbjct: 185 LVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVS 244
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
+ G + + VGAQVH IK G S+ V ++++ +Y KCG V E ++FD + +
Sbjct: 245 CVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEM 304
Query: 341 NLVTWNAMIAGHAQ--MMDLA-------KDD---------------LSAHNGGTEALSIF 376
+ + NA + G ++ M+D A KD S + EAL +F
Sbjct: 305 EIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELF 364
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+ + G++P+ T S++ C + AL G++IH +L+ G DV VG+AL++MY KC
Sbjct: 365 RDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKC 424
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
GRI+ A R F +MS L+SW +++ G+A H + + +++F ML +G +P+ VTF L
Sbjct: 425 GRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVL 484
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+AC+ G+ E + M +E+ I+P M+HY CL+ + R+G +EEA+ IK+M FEP+
Sbjct: 485 SACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPD 544
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W ++ CR H N+ LG AAE+L L+P + +Y +L +I+ S G W++ ++ +
Sbjct: 545 ACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREV 604
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF- 675
+ + L + +SWI + KV+ D HPQ +I + LD+L + K GY + +F
Sbjct: 605 MKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKKSGYLPKTNFV 664
Query: 676 ----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
E D+E HSEKLA+ GLLNT P+ V+K+ +C DCH IK+I+ L R
Sbjct: 665 LQDVEEQDKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGR 724
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EI VRD+ R H F +G C+C DF
Sbjct: 725 EIYVRDTNRFHHFKDGVCSCGDF 747
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 185/372 (49%), Gaps = 30/372 (8%)
Query: 181 ALTAC--SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS---AIKAFNR 235
AL+ C SS S+ +Q HA +++ DT + SL S Y+ SL++ ++ +
Sbjct: 4 ALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSH 63
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ + S++++I A + L FS + + P+ F L S C ++ +L G
Sbjct: 64 LPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPG 123
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ- 354
Q+H+ G+ ++ V +S+ ++YLKC + +A+KLFD M ++V W+AMIAG+++
Sbjct: 124 QQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRL 183
Query: 355 -MMDLAKD------------DLSAHNGG----------TEALSIFSKLNSSGMKPDLYTF 391
+++ AK+ +L + NG EA+ +F + G PD T
Sbjct: 184 GLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTV 243
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S +L L + G Q+H +K G SD V +A+++MY KCG ++ SRVF E+
Sbjct: 244 SCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEE 303
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
+ S + +TG + + + AL++F + N VT+ +A+CS G EAL
Sbjct: 304 MEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALEL 363
Query: 512 FEMMQKEYKIKP 523
F MQ Y ++P
Sbjct: 364 FRDMQA-YGVEP 374
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/687 (34%), Positives = 371/687 (54%), Gaps = 41/687 (5%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG--KCGNMEEAQKVFDNLPRI 138
LQ C + A +HA +KT S V + L+ +Y + N++ A +FD +
Sbjct: 22 LQNCGTER---EANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEP 78
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VSW LI Y++N + AI +F +L P + TL L C+ L +++ GKQIH
Sbjct: 79 TLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIH 137
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
V+K D V +SL S+YS CG + K F+R+ +K+V+SW ++I GE
Sbjct: 138 GLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIE 197
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L F +M + + F+ T + L V + +RNS+
Sbjct: 198 LALEMFEEM----PEKDSFSWTILIDGLSKSGKLEAARDVFD---------RMPIRNSVS 244
Query: 319 YL-----YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+ Y+K G + A++LFD M +LVTWN+MI G+ + T+AL
Sbjct: 245 WNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQF-----------TKAL 293
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F + + P+ T ++ S +V+L G +H+ +K+GF +D V+GT L+ MY
Sbjct: 294 KLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMY 353
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG ++ A RVF + + L WTS+I G H L Q L+LF++M G++P+ +TF+
Sbjct: 354 SKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFI 413
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+AG +A YF+MM +Y IKP ++HY CLID+ R G +EEA D I++M
Sbjct: 414 GVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPI 473
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ N+VIW+ ++G R+HGN+ +G YAA+ L+ L P Y +L +++ +AG WE V V
Sbjct: 474 KANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQV 533
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ + +++ + + S I + ++ F D HPQ+ EI+ L E+ +K G+
Sbjct: 534 REMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDT 593
Query: 674 S-----FELTDEESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
+ E +E+ A + HSE+LAIAFGLLN SPI ++K+ +C DCH K+++
Sbjct: 594 TQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKLLSH 653
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REII+RD R H F +G C+C+DF
Sbjct: 654 IYNREIIIRDGSRFHHFKSGSCSCKDF 680
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 186/390 (47%), Gaps = 21/390 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L+ C +L + IH ++K G D FV++ LV++Y KCG +E +KVFD + +
Sbjct: 120 VLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKD 179
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSW SLI GY + + ELA+ +F +M E ++ + + L+ LE+ R
Sbjct: 180 VVSWNSLIDGYARCGEIELALEMFEEMPEKDSFSWTILI-DGLSKSGKLEAAR------- 231
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V ++ N++ + Y G N+A + F+++ E+++++W ++I N + +
Sbjct: 232 DVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTK 291
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L+ F ML E I PN T+ S M+SL G VHS +K G+ ++ + ++
Sbjct: 292 ALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIE 351
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG V A ++F + L W ++I G L H + L +F ++
Sbjct: 352 MYSKCGSVKSALRVFRSIPKKKLGHWTSVIVG-----------LGMHGLVEQTLELFDEM 400
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+G+KP TF +L CS E + +T G + L+++ + G
Sbjct: 401 CRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGH 460
Query: 439 IERASRVFVEMSTR-TLISWTSMITGFANH 467
+E A M + + WTS+++G H
Sbjct: 461 LEEAKDTIERMPIKANKVIWTSLLSGSRKH 490
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 367/696 (52%), Gaps = 33/696 (4%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
K L++ ++ + SH ++ +NV G+ AQ++FDN+P+ + + ++LI
Sbjct: 49 KQLTSTKVAPSVPTNIPSHLGLRLLKAALNV----GDFRRAQQLFDNIPQPDPTTCSTLI 104
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
S + P AI ++ + G P N T AC + K++H ++
Sbjct: 105 SAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMM 164
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D +GN+L Y C + A + F+ + K+V+SWT++ G GL F +M
Sbjct: 165 SDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEM 224
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
G++PN TL+SI C + L+ G +H ++ G N+ V ++++ LY +C V
Sbjct: 225 GWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSV 284
Query: 328 DEAQKLFDGMSHVNLVTWNAMIA----------GHAQMMDLAKDDLSA------------ 365
+A+ +FD M H ++V+WN ++ G A ++ + A
Sbjct: 285 KQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGC 344
Query: 366 -HNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
NG TE A+ + K+ + G KP+ T SS L CS L +L G+++H + + D+
Sbjct: 345 MENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDL 404
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
TALV MY KCG + + VF + + +++W +MI A H + L LFE ML +
Sbjct: 405 TTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQS 464
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G++PN VTF G L+ CS++ +V E L F M +++ ++P +HY C++D+F R G + E
Sbjct: 465 GIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHE 524
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A++FI++M EP W + CR + N+EL +A +L +++P + +Y L +I V+
Sbjct: 525 AYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVT 584
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A W + + + L +E +++T SW+++ D+V++F D + +S +I+ LDEL EK
Sbjct: 585 AKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMESDKIYNFLDELGEK 644
Query: 664 AKCFGYKQQESFELTD---EESAS--VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GYK + L D EE A HSEKLA+AFG+LN S I V K+ +C DC
Sbjct: 645 MKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 704
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
HN IK ++ + IIVRDS R H F NG+C+C+D
Sbjct: 705 HNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDL 740
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 223/464 (48%), Gaps = 58/464 (12%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ G K S ++++ + C S + +H ++ G D F+ L++ YGKC
Sbjct: 122 SLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCK 181
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+E A++VFD+L +VVSWTS+ S YV P L + VF +M G P +VTL + L
Sbjct: 182 CVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILP 241
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
ACS L+ ++ G+ IH + V++ ++ V ++L SLY+ C S+ A F+ + ++V+S
Sbjct: 242 ACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVS 301
Query: 244 -----------------------------------WTTVIGACGENGEAVQGLRFFSKML 268
W VIG C ENG+ + + KM
Sbjct: 302 WNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQ 361
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+ G +PN+ T++S C + SLR+G +VH + +L +++Y+Y KCG ++
Sbjct: 362 NLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLN 421
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
++ +FD + ++V WN MI +A H G E L +F + SG+KP+
Sbjct: 422 LSRNVFDMICRKDVVAWNTMIIANAM-----------HGNGREVLLLFESMLQSGIKPNS 470
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFV 447
TF+ +L+ CS +E+G QI + + D +V+++ + GR+ A
Sbjct: 471 VTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQ 530
Query: 448 EMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
M T +W +++ A ++++++ LA + N++
Sbjct: 531 RMPMEPTASAWGALLG----------ACRVYKNVELAKISANKL 564
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/724 (32%), Positives = 386/724 (53%), Gaps = 55/724 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEA 128
++ +SLL C K+L + IIHA ++K G H + ++ L+ + + A
Sbjct: 31 IRNHPSLSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYA 87
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + N++ W ++ G+ +S P A+ +++ M+ G P + T L +C+
Sbjct: 88 ISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS 147
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR------------- 235
++ + G+QIH +V+K + D V SL S+Y G L A K F++
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 236 ------------------IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
I K+V+SW +I E G + L F M+ ++P+E
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
T+ ++ S C S+ +G QVH G+ SNL++ N+++ LY KCG ++ A LF+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
+ ++++WN +I G+ M N EAL +F ++ SG P+ T SIL
Sbjct: 328 PYKDVISWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 398 CSRLVALEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ L A++ G IH K G + + T+L++MY KCG IE A +VF + ++L
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW +MI GFA H + + LF M G++P+ +TFVG L+ACS++GM+ F M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
++YK+ P ++HY C+ID+ G +EA + I M+ EP+ VIW + C+ HGN+EL
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G AE L+K++P++ SY +L +I+ SAGRW +VA + L ++ + + S I I
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDE---LVEKAKCFGYKQQESFELTDE--ESASVYHSEK 690
V+ F D HP++ EI+ +L+E L+EKA + E+ +E E A +HSEK
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LAIAFGL++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+
Sbjct: 677 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 736
Query: 751 CRDF 754
C D+
Sbjct: 737 CNDY 740
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 48/354 (13%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
++A V + P SY +L++ +R
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASR------------------------------- 213
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
G +E AQK+FD +P +VVSW ++ISGY + + A+ +F DM++ P T+
Sbjct: 214 ----GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
T ++AC+ SI LG+Q+H ++ + + + N+L LYS CG L +A F R+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+V+SW T+IG + L F +ML G PN+ T+ SI C + ++ +G +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 299 HSLGIKL--GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
H K G + +R S++ +Y KCG ++ A ++F+ + H +L +WNAMI G A
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM-- 447
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
H + +FS++ G++PD TF +L+ CS L+ G I
Sbjct: 448 ---------HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/660 (33%), Positives = 363/660 (55%), Gaps = 49/660 (7%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF ++ N +SW ++I G+ +S P A+++++ M+ G P + T +C+
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS-------------------------- 221
++ + GKQIHA ++KY D V SL S+Y+
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 222 -----TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ G+++ A K F+ I K+V+SW +I E G + L F++M+ ++P+E
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ ++ S C ++ +G Q+HS G+ SNL++ N+++ LY KCG ++ A LF+G
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+ + ++++WN +I G+A + N EAL +F ++ G P+ T SIL
Sbjct: 271 LQYKDVISWNTLIGGYAYI-----------NHHKEALLVFQEMLKLGETPNDVTMLSILP 319
Query: 397 ICSRLVALEQGEQIHALTLKT--GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C+ L A++ G IH K G +++ + T+L++MY KCG IE A++VF + ++L
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
S +MI GFA H + A L M G+ P+ +TFVG L+ACS+AG+ F+
Sbjct: 380 SSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKS 439
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M +Y+I+P ++HY C+ID+ R G +EA + I M EP+ VIW + C+ H N+E
Sbjct: 440 MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLE 499
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG A++L+K++PK+ SY +L +I+ ++ RW+DVA V+ L ++ L + S I I
Sbjct: 500 LGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEID 559
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
V+ F D HPQ+ EI+K+L+E+ G+ S L + +E A YHSE
Sbjct: 560 SMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSE 619
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFGL++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C
Sbjct: 620 KLAIAFGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 228/465 (49%), Gaps = 64/465 (13%)
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
C L L AI F I+E N +SW T+I + + + L + M+S G+ PN
Sbjct: 18 FCILTPYFHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPN 77
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+T + C + + G Q+H+ +K G +L V S++ +Y + G+V++A K+FD
Sbjct: 78 SYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFD 137
Query: 336 GMSHVNLVTWNAMIAGHAQM--MDLAK--------DDLSAHNGG----------TEALSI 375
SH ++V++ AMI G+A MD A+ D+ + N EAL +
Sbjct: 138 TSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALEL 197
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F+++ +KPD T +++L+ C+ +E G QIH+ GF S++ + AL+++Y K
Sbjct: 198 FNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSK 257
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG +ERA +F + + +ISW ++I G+A + +AL +F++ML G PN VT +
Sbjct: 258 CGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSI 317
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDH---YMCLIDMFVRLGCIE---------- 542
L AC++ G + +G + + + K+K ++ + LIDM+ + G IE
Sbjct: 318 LPACAHLGAI--DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTIL 375
Query: 543 ---------------------EAFDFIKKMD---FEPNEVIWSVFIAGCRRHGNMELG-- 576
AFD + +M EP+++ + ++ C G +LG
Sbjct: 376 NKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRK 435
Query: 577 -FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTRE 619
F + +++PK E Y ++D+ +G +++ ++ ++T E
Sbjct: 436 IFKSMTLDYRIEPK-LEHYGCMIDLLGRSGLFKEAEELINSMTME 479
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 213/453 (47%), Gaps = 48/453 (10%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG----- 104
+S+P+ +L + L P T + L + C K+ + IHA I+K G
Sbjct: 56 SSDPISALNLYVYMISLGLSPNSYTFPF--LFKSCAKSKAAQEGKQIHAQILKYGLTVDL 113
Query: 105 --------------------------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SH+D T ++ Y GNM++AQK+FD +P
Sbjct: 114 HVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIK 173
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSW ++ISGY + + + A+ +F +M++ P T+ T L+ C+ ++ LG+QIH
Sbjct: 174 DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIH 233
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L LYS CG + A F ++ K+V+SW T+IG
Sbjct: 234 SWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHK 293
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH-SLGIKL-GYASNLRVRNS 316
+ L F +ML G PN+ T+ SI C + ++ +G +H + KL G +N ++ S
Sbjct: 294 EALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTS 353
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG ++ A ++FD + + +L + NAMI G A H A +
Sbjct: 354 LIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAM-----------HGRADAAFDLL 402
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKK 435
S++ G++PD TF +L+ CS + G +I ++TL + ++++ +
Sbjct: 403 SRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGR 462
Query: 436 CGRIERASRVFVEMSTRTL-ISWTSMITGFANH 467
G + A + M+ + W S++ H
Sbjct: 463 SGLFKEAEELINSMTMEPDGVIWGSLLKACKIH 495
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/676 (32%), Positives = 355/676 (52%), Gaps = 102/676 (15%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
+S + LL C+ +S ++HA I+ T + F+ L++VYGKC +++A+K+FD
Sbjct: 15 SSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFD 74
Query: 134 NLPRINVVSWTSLI-------------------------------SGYVQNSQPELAIHV 162
+P+ N +W SLI SG+ Q+ + E ++
Sbjct: 75 RMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEY 134
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F+ M + G+AL+AC+ L + +G Q+HA V K + D +G++L +YS
Sbjct: 135 FVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSK 194
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS+ A + F+ + E+N+++W ++I +NG A + L F +M+ G++P+E TL S+
Sbjct: 195 CGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS--- 338
S C ++ +L+ G Q+H+ +K + +L + N+++ +Y KC V+EA+++FD MS
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314
Query: 339 ----------------------------HVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
N+V+WNA+IAG+ Q NG
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQ------------NGEN 362
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL +F L + P YTF ++L SD+ VG +L
Sbjct: 363 EEALRLFRLLKRESIWPTHYTFGNLLK------------------------SDIFVGNSL 398
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG IE SRVF +M R +SW ++I G+A + +ALQ+F ML+ G +P+
Sbjct: 399 IDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDH 458
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT +G L ACS+AG+V E YF M+ E+ + P+ DHY C++D+ R GC+ EA + I+
Sbjct: 459 VTMIGVLCACSHAGLVEEGRHYFFSME-EHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIE 517
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M P+ V+W +A C+ HGN+E+G +AAE+LL++ P + Y +L +++ GRW D
Sbjct: 518 AMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGD 577
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V V+ L R++ +++ SWI ++ +V+ F D HP +I+ VL L E+ K GY
Sbjct: 578 VVRVRKLMRQQGVTKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGY 637
Query: 670 -KQQESFELTDEESAS 684
FE DE+S S
Sbjct: 638 IPDANDFEAYDEQSKS 653
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 227/457 (49%), Gaps = 72/457 (15%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P + L +C S R + +HA ++ Q + + N L +Y C L+ A K
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 233 FNRIREKNVMSWTTVIGACGENG---EAV----------------------------QGL 261
F+R+ ++N +W ++I ++G EA + L
Sbjct: 73 FDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESL 132
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
+F KM E NE++ S S C ++ L +G QVH+L K Y++++ + ++++ +Y
Sbjct: 133 EYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMY 192
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLN 380
KCG V A+++F GM NLVTWN++I + Q NG +EAL +F ++
Sbjct: 193 SKCGSVACAEEVFSGMIERNLVTWNSLITCYEQ------------NGPASEALEVFVRMM 240
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRI 439
SG++PD T +S+++ C+ L AL++G QIHA +KT F D+V+G ALV+MY KC ++
Sbjct: 241 DSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKV 300
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
A RVF MS R ++S TSM++G+A + A +F M + N V++ +A
Sbjct: 301 NEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKM----TQRNVVSWNALIAGY 356
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYM-------------CLIDMFVRLGCIEEAFD 546
+ G EAL F ++++E I P HY LIDM+++ G IE+
Sbjct: 357 TQNGENEEALRLFRLLKRE-SIWPT--HYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSR 413
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+KM E + V W+ I G ++G Y AE L
Sbjct: 414 VFEKMK-ERDCVSWNAIIVGYAQNG------YGAEAL 443
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 141/304 (46%), Gaps = 13/304 (4%)
Query: 61 EALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFL 115
EAL V + G + + S++ C + +L IHA +VKT +D V+ L
Sbjct: 231 EALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNAL 290
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KC + EA++VFD + NVVS TS++SGY + + + A +F M + N
Sbjct: 291 VDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWN 350
Query: 176 VTLGTALTACSSLESIRLGKQIHA-------YVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
+ + E++RL + + Y + D VGNSL +Y CGS+
Sbjct: 351 ALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIED 410
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
+ F +++E++ +SW +I +NG + L+ F KML G +P+ T+ + C
Sbjct: 411 GSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSH 470
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNA 347
+ G + G ++ L + G ++EA+ L + M + + V W +
Sbjct: 471 AGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 530
Query: 348 MIAG 351
++A
Sbjct: 531 LLAA 534
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 48/230 (20%)
Query: 383 GMKPDLY-----TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
G+ DLY F+ +L C R + +HA L T F ++ + L+++Y KC
Sbjct: 5 GLVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCD 64
Query: 438 RIERASRVFVEMSTRTLISW-------------------------------TSMITGFAN 466
++ A ++F M R +W SM++GFA
Sbjct: 65 CLDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQ 124
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H ++L+ F M N+ +F AL+AC AG++ +G ++ K + D
Sbjct: 125 HDRFEESLEYFVKMHREDFLLNEYSFGSALSAC--AGLMDLNMGT-QVHALVSKSRYSTD 181
Query: 527 HYM--CLIDMFVRLG---CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
YM LIDM+ + G C EE F + E N V W+ I ++G
Sbjct: 182 VYMGSALIDMYSKCGSVACAEEVFSGM----IERNLVTWNSLITCYEQNG 227
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/723 (29%), Positives = 367/723 (50%), Gaps = 75/723 (10%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH ++K G D ++ L+N YG+C +E+A +VF +P + W I +Q+ +
Sbjct: 696 IHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEK 755
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ + +F M + T+ L AC + ++ KQIH YV ++ + D S+ N
Sbjct: 756 LQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNP 815
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA------------------------- 250
L S+YS G L A + F+ + +N SW ++I +
Sbjct: 816 LISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPD 875
Query: 251 -----CGENGEAVQG-----LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
C +G + G L +M EG +PN ++TS+ + L +G + H
Sbjct: 876 IVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHG 935
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
++ G+ ++ V S++ +Y+K + AQ +FD M + N+ WN++++G+
Sbjct: 936 YVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGY-------- 987
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS------------------------ILT 396
S +AL + +++ G+KPDL T++ +L
Sbjct: 988 ---SFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLR 1044
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C+ L L++G++IH L+++ GF+ DV V TAL++MY K ++ A +VF + +TL S
Sbjct: 1045 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 1104
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W MI GFA L +A+ +F +M GV P+ +TF L+AC N+G++ E YF+ M
Sbjct: 1105 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 1164
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+Y+I P ++HY C++D+ R G ++EA+D I M +P+ IW + CR H N+
Sbjct: 1165 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFA 1224
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
AA+ L KL+P + +Y ++++++ RWED+ ++ L + WSWI+I +
Sbjct: 1225 ETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQR 1284
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKL 691
V+ F ++ HP + +I+ L +LV + K GY ++ + +++ + H+EKL
Sbjct: 1285 VHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKL 1344
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
AI +GL+ PI V+K+T +C DCH+ K I+ + ARE+ +RD R H F G C+C
Sbjct: 1345 AITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSC 1404
Query: 752 RDF 754
DF
Sbjct: 1405 NDF 1407
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/577 (22%), Positives = 247/577 (42%), Gaps = 88/577 (15%)
Query: 115 LVNVYGKCGNMEEAQKVFD-NLPRINVVSWTSLISGYVQNSQP-ELAIHVFLDMLEAGNY 172
L++ Y G+ A VF LPR N + W S + + ++ + + VF ++ G
Sbjct: 613 LISSYLGFGDFWSAAMVFYVGLPR-NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVV 671
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+ AL C+ + I LG +IH ++K + D + +L + Y C L A +
Sbjct: 672 FDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQV 731
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + + W I ++ + +G+ F KM ++ T+ + CG M +L
Sbjct: 732 FHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL 791
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
Q+H + G S++ + N ++ +Y K G ++ A+++FD M + N +WN+MI+ +
Sbjct: 792 NAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSY 851
Query: 353 AQM----------MDLAKDDLSA--------------HNGGTEALSIFSKLNSSGMKPDL 388
A + +L D+ H E L+I ++ G KP+
Sbjct: 852 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+ +S+L S L L G++ H L+ GF DV VGT+L++MY K + A VF
Sbjct: 912 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA------------- 495
M R + +W S+++G++ + AL+L M G++P+ VT+ G
Sbjct: 972 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKA 1031
Query: 496 -----------LAACSNAGM-------------------VYEALGYFEMMQKEYKIK--- 522
L AC++ + V+ A +M K +K
Sbjct: 1032 FMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 1091
Query: 523 --------PVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + C+I F G +EA F+ ++K+ P+ + ++ ++ C+ G
Sbjct: 1092 KVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSG 1151
Query: 572 NMELGFYAAEQLL---KLKPKDCESYAMLLDIFVSAG 605
+ G+ + ++ ++ P+ E Y ++D+ AG
Sbjct: 1152 LIGEGWKYFDSMITDYRIVPR-LEHYCCMVDLLGRAG 1187
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/580 (35%), Positives = 335/580 (57%), Gaps = 19/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ S G+ HA +++ E D N L ++YS C ++SA K FN + K++
Sbjct: 50 LQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSL 109
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW TVIGA +N E + L+ +M EG NEFT++S+ C ++ Q+H+
Sbjct: 110 VSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAF 169
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK SN V +++++Y KC + +A ++F+ M N VTW++M+AG+ Q
Sbjct: 170 SIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ------- 222
Query: 362 DLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
NG EAL IF G D + SS ++ C+ L L +G+Q+HA++ K+GF
Sbjct: 223 -----NGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFG 277
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVE-MSTRTLISWTSMITGFANHSLSHQALQLFED 479
S++ V ++L++MY KCG I A VF + R+++ W +MI+GFA H+ + +A+ LFE
Sbjct: 278 SNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEK 337
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G P+ VT+V L ACS+ G+ E YF++M +++ + P + HY C+ID+ R G
Sbjct: 338 MQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAG 397
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+ +A+D I++M F +W +A C+ +GN+E AA+ L +++P + ++ +L +
Sbjct: 398 LVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLAN 457
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ + +W++VA + L RE + + SWI IK+K++SF + HPQ +I+ LD
Sbjct: 458 IYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAKLDN 517
Query: 660 LVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
LV + K YK S +L D E +HSEKLAI FGL+ P PI ++K+ +
Sbjct: 518 LVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKNLRI 577
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH F+K+++ T+REIIVRD+ R H F +G C+C +F
Sbjct: 578 CGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEF 617
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 194/386 (50%), Gaps = 14/386 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LLQ C +S HA I++ G D L+N+Y KC ++ A+K F+ +P +
Sbjct: 49 LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKS 108
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+VSW ++I QN++ A+ + + M G T+ + L C+ +I Q+HA
Sbjct: 109 LVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHA 168
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+ +K + + VG +L +Y+ C S+ A + F + EKN ++W++++ +NG +
Sbjct: 169 FSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEE 228
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F G + F ++S S C + +L G QVH++ K G+ SN+ V +S++
Sbjct: 229 ALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLID 288
Query: 320 LYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG + EA +F G+ V ++V WNAMI+G A+ H EA+ +F K
Sbjct: 289 MYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFAR-----------HARAPEAMILFEK 337
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCG 437
+ G PD T+ +L CS + E+G++ L ++ LS V+ + ++++ + G
Sbjct: 338 MQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAG 397
Query: 438 RIERASRVFVEMSTRTLIS-WTSMIT 462
+ +A + M S W S++
Sbjct: 398 LVHKAYDLIERMPFNATSSMWGSLLA 423
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 15/329 (4%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL +L EG + S+L C + ++ +HA +K + FV T L
Sbjct: 126 REALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVGTAL 185
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++VY KC ++++A ++F+++P N V+W+S+++GYVQN E A+ +F + G
Sbjct: 186 LHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALLIFRNAQLMGFDQDP 245
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ +A++AC+ L ++ GKQ+HA K + V +SL +Y+ CG + A F
Sbjct: 246 FMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQG 305
Query: 236 IRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E ++++ W +I + A + + F KM G P++ T + + C M
Sbjct: 306 VLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEE 365
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYL-KCGLVDEAQKLFDGMS-HVNLVTWNAMIA-- 350
G + L ++ S + S M L + GLV +A L + M + W +++A
Sbjct: 366 GQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASC 425
Query: 351 ---GHAQMMDLAKD---DLSAHNGGTEAL 373
G+ + ++A ++ +N G L
Sbjct: 426 KIYGNIEFAEIAAKYLFEMEPNNAGNHIL 454
>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g71420-like [Vitis vinifera]
Length = 741
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 237/718 (33%), Positives = 373/718 (51%), Gaps = 42/718 (5%)
Query: 59 FQEALSV---LTEGPKVQTS--SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF--FV 111
QEAL + +T P + S +Y +L Q C R SL + +H H+ + DF F+
Sbjct: 43 LQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFL 102
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+VN+Y KCG+++ A ++FD +P N+VSWT+L+SGY Q+ + VF ML +
Sbjct: 103 TNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGML-IWH 161
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY-STCGSLNSAI 230
PT + ++AC ++ G+Q+HA +K + VGN+L +Y +CG + A
Sbjct: 162 QPTEFAFASVISACGGDDNC--GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGADEAW 219
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI-SSVCGTM 289
+ + +N++SW ++I G + L FS+M GI+ + TL SI S +CG
Sbjct: 220 NVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMG 279
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG-LVDEAQKLF---DGMSHVNLVTW 345
L Q+ L IK G+ + V +++ Y G V + ++F DG V V+W
Sbjct: 280 DGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDV--VSW 337
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+IA A+ +D +AL IF + + PD + FS +L C+ L
Sbjct: 338 TGIIAAFAE-----RDP-------KKALVIFRQFLRECLAPDRHMFSIVLKACAGLATER 385
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+ + LK GF D+V+ AL++ +CG + + +VF +M +R +SW SM+ +A
Sbjct: 386 HALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYA 445
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H +AL LF M +P+ TFV L+ACS+AGM E FE M + I P +
Sbjct: 446 MHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQL 502
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
DHY C++D+ R G I EA + I KM EP+ V+WS + CR+HG +L AA +L +
Sbjct: 503 DHYACMVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKE 562
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P + Y ++ +IF + GR+ + +++ + + + SWI + ++V+ F
Sbjct: 563 LDPNNSLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQ 622
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNT 700
HP+ I L+ELV + K GY Q S L D +E YHSEKLA+AF L+N
Sbjct: 623 QHPEKEAICARLEELVRRLKDLGYVPQISLALHDIEDEHKEEQLYYHSEKLALAFALMNV 682
Query: 701 PIV----SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + I ++K+ +C DCHNF+K+ + L EI+VRDS R H F C+C D+
Sbjct: 683 GSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDY 740
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/615 (34%), Positives = 340/615 (55%), Gaps = 14/615 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF+ +L G +Y +++Q C+ SL +++HA IV G FV T L+N
Sbjct: 205 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 264
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G++E++ VF+ + N VSW ++ISG N A +F+ M P T
Sbjct: 265 MYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 324
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF--NR 235
L + A L + +GK++ + E + VG +L +YS CGSL+ A F N
Sbjct: 325 LVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNF 384
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I W +I ++G + + L + +M GI + +T S+ + SL+ G
Sbjct: 385 INCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFG 444
Query: 296 AQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
VH + +K G + V N+I Y KCG +++ +K+FD M ++V+W ++ ++Q
Sbjct: 445 RVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQ 504
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ G EAL+ F + G P+ +TFSS+L C+ L LE G Q+H L
Sbjct: 505 -----------SSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL 553
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K G ++ + +AL++MY KCG I A +VF ++S ++SWT++I+G+A H L AL
Sbjct: 554 CKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDAL 613
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
QLF M L+G++ N VT + L ACS+ GMV E L YF+ M+ Y + P M+HY C+ID+
Sbjct: 614 QLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDL 673
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R+G +++A +FI+KM EPNE++W + GCR HGN+ELG AA ++L ++P+ +Y
Sbjct: 674 LGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATY 733
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L + ++ G +ED ++N+ +++ + + +SWI +K +V+ F D HPQ EI+
Sbjct: 734 VLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIY 793
Query: 655 KVLDELVEKAKCFGY 669
L+EL EK K GY
Sbjct: 794 VKLEELREKIKAMGY 808
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/526 (29%), Positives = 262/526 (49%), Gaps = 32/526 (6%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVM-TFLVNV 118
E++ + + Q + +L++C + S+ A+ +H ++K+ +D V+ +V
Sbjct: 105 ESIGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHV 164
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KC A VFD +P+ NV SWT +I G ++ F +ML +G P
Sbjct: 165 YSKCSEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAY 224
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ +C L+S+ LGK +HA +V V SL ++Y+ GS+ + FN + E
Sbjct: 225 SAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTE 284
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
N +SW +I C NG ++ F +M + PN +TL S+S G ++ + +G +V
Sbjct: 285 HNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV 344
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL---VTWNAMIAGHAQM 355
+ +LG N+ V +++ +Y KCG + +A+ +FD + +N WNAMI+G++Q
Sbjct: 345 QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFD-TNFINCGVNTPWNAMISGYSQ- 402
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
EAL ++ ++ +G+ DLYT+ S+ + +L+ G +H + L
Sbjct: 403 ----------SGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVL 452
Query: 416 KTGF-LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K G L V V A+ + Y KCG +E +VF M R ++SWT+++T ++ SL +AL
Sbjct: 453 KCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEAL 512
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI--KPVMDHYMC-- 530
F M G PNQ TF L +C+ +L + E ++ + + K +D C
Sbjct: 513 ATFCLMREEGFAPNQFTFSSVLISCA-------SLCFLEYGRQVHGLLCKAGLDTEKCIE 565
Query: 531 --LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
LIDM+ + G I EA K+ P+ V W+ I+G +HG +E
Sbjct: 566 SALIDMYAKCGSITEAGKVFDKIS-NPDIVSWTAIISGYAQHGLVE 610
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/682 (31%), Positives = 361/682 (52%), Gaps = 58/682 (8%)
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEE--------------------AQKVFDNLPRI 138
+ T ++ ++ F+V+ Y K G+ +E A ++FD L
Sbjct: 17 RVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDR 76
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+V+SW S+ISGYV N E + ++ M+ G T+ + L C+ ++ LGK +H
Sbjct: 77 DVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVH 136
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ +K E + N+L +YS CG L+ A++ F ++ E+NV+SWT++I +G +
Sbjct: 137 SLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSD 196
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ +M EG++ + +TSI C SL G VH ASNL V N++M
Sbjct: 197 GAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALM 256
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG ++ A +F M ++++WN M+
Sbjct: 257 DMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE--------------------------- 289
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+KPD T + IL C+ L ALE+G++IH L+ G+ SD V ALV++Y KCG
Sbjct: 290 -----LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 344
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A +F + ++ L+SWT MI G+ H ++A+ F +M AG+ P++V+F+ L A
Sbjct: 345 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 404
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS++G++ + +F +M+ ++ I+P ++HY C++D+ R G + +A+ FI+ + P+
Sbjct: 405 CSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDAT 464
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW + GCR + ++EL AE++ +L+P++ Y +L +I+ A +WE+V ++
Sbjct: 465 IWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIG 524
Query: 619 EEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
++ L + SWI IK +V F N+ HP S +I +L ++ K K GY + + L
Sbjct: 525 KKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 584
Query: 678 TD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
+ +E A HSEKLA+AFGLL P I V K+ +C DCH K ++ T RE
Sbjct: 585 INADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRRE 644
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
I++RDS R H F +G+C+CR F
Sbjct: 645 IVLRDSNRFHHFKDGYCSCRGF 666
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 188/360 (52%), Gaps = 36/360 (10%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG +E R LG + + L G V ++ +S+L C +LS + +H+ +K+ +
Sbjct: 91 NGLTE--RGLGIYKQMMYL--GIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFER 146
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
L+++Y KCG+++ A +VF+ + NVVSWTS+I+GY ++ + AI + M
Sbjct: 147 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 206
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ G V + + L AC+ S+ GK +H Y+ + V N+L +Y+ CGS+
Sbjct: 207 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 266
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F+ + K+++SW T++G ++P+ T+ I C
Sbjct: 267 GANSVFSTMVVKDIISWNTMVGE---------------------LKPDSRTMACILPACA 305
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ +L G ++H ++ GY+S+ V N+++ LY+KCG++ A+ LFD + +LV+W
Sbjct: 306 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 365
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MIAG+ H G EA++ F+++ +G++PD +F SIL CS LEQG
Sbjct: 366 MIAGYGM-----------HGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 414
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 180/416 (43%), Gaps = 103/416 (24%)
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKN----------------------------------- 240
L S Y+TCG L + F+ + +KN
Sbjct: 2 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGK 61
Query: 241 ----------------VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
V+SW ++I NG +GL + +M+ GI + T+ S+
Sbjct: 62 RSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLV 121
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C +L +G VHSL IK + + N+++ +Y KCG +D A ++F+ M N+V+
Sbjct: 122 GCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVS 181
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
W +MIAG+ + +G ++ A+ + ++ G+K D+ +SIL C+R +
Sbjct: 182 WTSMIAGYTR------------DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGS 229
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L+ G+ +H S++ V AL++MY KCG +E A+ VF M + +ISW +M+
Sbjct: 230 LDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV-- 287
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV---YEALGYFEMMQKEYK 520
++P+ T L AC++ + E GY +++ Y
Sbjct: 288 -------------------GELKPDSRTMACILPACASLSALERGKEIHGY--ILRNGYS 326
Query: 521 IKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
D ++ L+D++V+ G + A FD I D V W+V IAG HG
Sbjct: 327 ----SDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL----VSWTVMIAGYGMHG 374
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/700 (31%), Positives = 369/700 (52%), Gaps = 32/700 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + + V L C + A IH+ + ++G Q V T L + Y + G++++
Sbjct: 222 EGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQ 278
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++VFD +VVSW +++ Y Q+ A +F ML G P+ VTL A T CSS
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSS 338
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L R G+ IHA ++ + D +GN+L +Y+ CGS A F I N +SW T+
Sbjct: 339 L---RFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGI-PGNAVSWNTM 394
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFT----LTSISSVCGTMLSLRVGAQVHSLGI 303
I + G+ + L F +M EG+ P T L +++S ++ G ++HS +
Sbjct: 395 IAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS---HVNLVTWNAMIAGHAQMMDLAK 360
GYAS + +++ +Y CG +DEA F + ++V+WNA+I+
Sbjct: 455 SCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIIS---------- 504
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
LS H G AL F +++ G+ P+ T ++L C+ AL +G +H +G
Sbjct: 505 -SLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGME 563
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFED 479
S+V V TAL +MY +CG +E A +F +++ R ++ + +MI ++ + L+ +AL+LF
Sbjct: 564 SNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWR 623
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G RP++ +FV L+ACS+ G+ E F M++ Y I P DHY C +D+ R G
Sbjct: 624 MQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAG 683
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+ +A + I+ MD +P ++W + CR++ +++ G A + +L P D +Y +L +
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSN 743
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I AG+W++ A V+ L + SWI IK +V+ F D HP+S EI++ L+
Sbjct: 744 ILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELER 803
Query: 660 LVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L + + GY L ++E HSE+LAIA G++++ + V+K+ +
Sbjct: 804 LHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS-TDTVRVMKNLRV 862
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHN K I+ + +EI+VRD+ R H FV+G C+C D+
Sbjct: 863 CEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDY 902
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 266/511 (52%), Gaps = 27/511 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + +++++L+ C LS IHA IV++G + L+++YG CG +
Sbjct: 122 EGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVAS 181
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +F+ + R ++VSW + I+ Q+ ++A+ +F M G P +TL L+ C+
Sbjct: 182 AMLLFERMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA- 239
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
IR + IH+ V + E V +L S Y+ G L+ A + F+R E++V+SW +
Sbjct: 240 --KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAM 297
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+GA ++G + F++ML EGI P++ TL + S+ C SLR G +H+ ++ G
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGL 354
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ + N+++ +Y +CG +EA+ LF+G+ N V+WN MIAG +Q + +
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKR------- 406
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICS----RLVALEQGEQIHALTLKTGFLSDV 423
AL +F ++ GM P T+ ++L + A+ +G ++H+ + G+ S+
Sbjct: 407 ----ALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEP 462
Query: 424 VVGTALVNMYKKCGRIERASRVFVE--MSTR-TLISWTSMITGFANHSLSHQALQLFEDM 480
+GTA+V MY CG I+ A+ F M R ++SW ++I+ + H +AL F M
Sbjct: 463 AIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRM 522
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
L GV PNQ+T V L AC+ A + E + + ++ V L M+ R G
Sbjct: 523 DLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFV-ATALASMYGRCGS 581
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+E A + +K+ E + VI++ IA ++G
Sbjct: 582 LESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 262/529 (49%), Gaps = 32/529 (6%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V LL+ + + LS IHA IV G ++ L+ +Y KC ++ + ++VF L
Sbjct: 33 VRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEV 90
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+ SWT++I+ Y ++ Q + AI +F M + G VT L AC+ L + G+ I
Sbjct: 91 RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA++V+ E + + N L +Y +CG + SA+ F R+ E++++SW I A ++G+
Sbjct: 151 HAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDL 209
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
L F +M EG++P TL SVC + R +HS+ + G L V ++
Sbjct: 210 DMALELFQRMQLEGVRPARITLVITLSVCAKIRQARA---IHSIVRESGLEQTLVVSTAL 266
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
Y + G +D+A+++FD + ++V+WNAM+ +AQ H +EA +F+
Sbjct: 267 ASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQ-----------HGHMSEAALLFA 315
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
++ G+ P T + T CS +L G IHA L+ G D+V+G AL++MY +CG
Sbjct: 316 RMLHEGIPPSKVTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCG 372
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
E A +F E +SW +MI G + +AL+LF+ M L G+ P + T++ L
Sbjct: 373 SPEEARHLF-EGIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLE 431
Query: 498 ACSNAGMVYEALGYFEMMQKE-----YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK-- 550
A ++ A+ + Y +P + ++ M+ G I+EA ++
Sbjct: 432 AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGA 489
Query: 551 MDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAML 597
M+ + V W+ I+ +HG+ + LGF+ L + P A+L
Sbjct: 490 MEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVL 538
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 226/695 (32%), Positives = 379/695 (54%), Gaps = 23/695 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEI---IHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
EG ++ + S L+ V SL AEI +H+ IVK G + FV L+N Y CG+
Sbjct: 140 EGHELNPHVFTSFLKLFV---SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+ VF+ + ++V W ++S YV+N E ++ + M AG P N T TAL A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
L + K +H ++K D VG L LY+ G ++ A K FN + + +V+ W
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I +NG + + F +M + PNEFTL+SI + C +G Q+H L +K
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+G+ ++ V N+++ +Y KC +D A KLF +S N V+WN +I G+ + +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE------- 429
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
G +A S+F + + + TFSS L C+ L +++ G Q+H L +KT V
Sbjct: 430 ----GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +L++MY KCG I+ A VF EM T + SW ++I+G++ H L QAL++ + M
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+PN +TF+G L+ CSNAG++ + FE M +++ I+P ++HY C++ + R G +++A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
I+ + +EP+ +IW ++ N E +AE++LK+ PKD +Y ++ +++ A
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGA 665
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
+W +VA ++ +E + + SWI + V+ F HP I +L+ L KA
Sbjct: 666 KQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKA 725
Query: 665 KCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIV-SPILVVKSTTMCRDC 718
GY + ++ DEE HSE+LA+A+GL+ P + IL++K+ +C DC
Sbjct: 726 TRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDC 785
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
H+ +K+I+S+ R++++RD R H F G C+C D
Sbjct: 786 HSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 252/524 (48%), Gaps = 22/524 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P + + +Y ++L+ C+ + +A+ IH I+K GS D F L+N Y K G ++A
Sbjct: 45 PGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL 104
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P N VS+ +L GY I ++ + G+ + L SL+
Sbjct: 105 NLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ +H+ +VK + + VG +L + YS CGS++SA F I K+++ W ++
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
ENG L+ S M G PN +T + + + VH +K Y
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
+ RV ++ LY + G + +A K+F+ M ++V W+ MIA Q NG
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ------------NGF 328
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+ +F ++ + + P+ +T SSIL C+ GEQ+H L +K GF D+ V A
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y KC +++ A ++F E+S++ +SW ++I G+ N +A +F + L V
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+VTF AL AC++ + + + K K V LIDM+ + G I+ A
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN-SLIDMYAKCGDIKFAQSVF 507
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+M+ + W+ I+G HG LG A L +K +DC+
Sbjct: 508 NEME-TIDVASWNALISGYSTHG---LGRQALRILDIMKDRDCK 547
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/624 (34%), Positives = 348/624 (55%), Gaps = 26/624 (4%)
Query: 146 LISGYVQNSQPELAIHV--------FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
L+S + NS L IH+ L M G T L C +IR G+++
Sbjct: 21 LLSTFPSNSHHVLNIHIHDTRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRV 80
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA+++K + L Y C SL A F+ + E+NV+SWT +I A + G A
Sbjct: 81 HAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYA 140
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
Q L F +ML G +PNEFT ++ + C +G Q+HS IKL Y +++ V +S+
Sbjct: 141 SQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSL 200
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y K G + EA+ +F + ++V+ A+I+G+AQ L D+ EAL +F
Sbjct: 201 LDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQ---LGLDE--------EALELFR 249
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+L GM+ + T++S+LT S L AL+ G+Q+H L++ S VV+ +L++MY KCG
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGAL 496
+ A R+F + RT+ISW +M+ G++ H + L+LF M+ V+P+ VT + L
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369
Query: 497 AACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
+ CS+ G+ + + +++M + ++P HY C++DM R G +E AF+F+KKM FEP
Sbjct: 370 SGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEP 429
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ IW + C H N+++G + QLL+++P++ +Y +L +++ SAGRWEDV ++N
Sbjct: 430 SAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDVRSLRN 489
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF 675
L ++ +++ SWI + +++F +D HP+ E+ + EL + K GY S
Sbjct: 490 LMLKKAVTKEPGRSWIELDQVLHTFHASDCSHPRREEVSAKVQELSARFKEAGYVPDLSC 549
Query: 676 ELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L D +E + HSEKLA+ FGL+ TP PI V+K+ +C DCHNF K + +
Sbjct: 550 VLHDVDEEQKEKILLSHSEKLALTFGLIATPESVPIRVIKNLRICVDCHNFAKYTSKIYG 609
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
RE+ +RD R H+ V G C+C D+
Sbjct: 610 REVSLRDKNRFHRIVGGKCSCGDY 633
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 219/426 (51%), Gaps = 24/426 (5%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + G Y ++L EC+ ++++ + +HAH++KT ++ T L+ Y KC
Sbjct: 47 LHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKC 106
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
++ +A+ VFD +P NVVSWT++IS Y Q A+ +F+ ML +G P T T L
Sbjct: 107 DSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVL 166
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
T+C LG+QIH++++K E VG+SL +Y+ G ++ A F + E++V+
Sbjct: 167 TSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVV 226
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
S T +I + G + L F ++ EG+Q N T TS+ + + +L G QVH+
Sbjct: 227 SCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHL 286
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++ S + ++NS++ +Y KCG + A+++FD + +++WNAM+ G+
Sbjct: 287 LRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGY---------- 336
Query: 363 LSAHNGGTEALSIFS-KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
S H G E L +F+ ++ + +KPD T ++L+ CS ++G I + +G +S
Sbjct: 337 -SKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIF-YDMTSGKIS 394
Query: 422 ---DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHS-------LS 470
D +V+M + GR+E A +M + W ++ + HS +
Sbjct: 395 VQPDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVG 454
Query: 471 HQALQL 476
HQ LQ+
Sbjct: 455 HQLLQI 460
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/695 (30%), Positives = 361/695 (51%), Gaps = 57/695 (8%)
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+ T H+ V+ F V + +A+ VFD P WT ISG + + +
Sbjct: 41 LATVPHERASVLRFWV----RRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGM 96
Query: 161 HVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
F +ML G P L + C+ + + GK++H ++++ D + N++ +
Sbjct: 97 RAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDM 156
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS-------------- 265
Y+ CG A + F + E++ +SW IGAC ++G+ + ++ F
Sbjct: 157 YAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTII 216
Query: 266 -----------------KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+M G+ N +T ++ + G +L +G Q+H +
Sbjct: 217 SGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALE 276
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL---VTWNAMIAGHAQMMDLAKDDLSA 365
+ VR+S+M +Y KCGL++ A +FD S + W+ M+AG+ Q
Sbjct: 277 GDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQ----------- 325
Query: 366 HNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG E AL +F ++ G+ D +T +S+ C+ + +EQG Q+H K + D
Sbjct: 326 -NGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAP 384
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ +A+V+MY KCG +E A +F T+ + WTSM+ +A+H A++LFE M
Sbjct: 385 LASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEK 444
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ PN++T VG L+ACS+ G+V E YF+ MQ+EY I P ++HY C++D++ R G +++A
Sbjct: 445 MTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKA 504
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+FI++ + ++W ++ CR H + E A+E+L++L+ D SY ML +I+ +
Sbjct: 505 KNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIYATN 564
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
+W D ++ +E K+ + SWI +K+ V++F D HPQSAEI+ L++LVE+
Sbjct: 565 NKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAYLEKLVERL 624
Query: 665 KCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY + + D E+A +HSEKLAIAFG+++TP +P+ + K+ +C DCH
Sbjct: 625 KEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGIISTPSGTPLRIFKNLRVCEDCH 684
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK I+ T REI+VRD R H F + C+C DF
Sbjct: 685 EAIKYISLATGREIVVRDLYRFHHFKDASCSCEDF 719
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 205/449 (45%), Gaps = 52/449 (11%)
Query: 58 GFQEALSVLTEGPKVQTSSYVS-LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
G + +L EG + ++ +++ C + + + +H +++ G H D + ++
Sbjct: 95 GMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVL 154
Query: 117 NVYGKCGNMEEAQKV-------------------------------FDNLPRINVVSWTS 145
++Y KCG E A++V FD P + SW +
Sbjct: 155 DMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNT 214
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+ISG +++ A+ M +AG + T TA L LG+Q+H V+
Sbjct: 215 IISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAA 274
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNR----IREKNVMSWTTVIGACGENGEAVQGL 261
E D V +SL +Y CG L +A F+ R+ N +W+T++ +NG + L
Sbjct: 275 LEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMN-FAWSTMVAGYVQNGREEEAL 333
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F +ML EG+ + FTLTS+++ C + + G QVH KL Y + + ++I+ +Y
Sbjct: 334 DLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMY 393
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
KCG +++A+ +FD N+ W +M+ +A +H G A+ +F ++ +
Sbjct: 394 AKCGNLEDARSIFDRACTKNIAVWTSMLCSYA-----------SHGQGRIAIELFERMTA 442
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
M P+ T +L+ CS + + +GE + + G + + +V++Y + G ++
Sbjct: 443 EKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLD 502
Query: 441 RASRVFVEMS--TRTLISWTSMITGFANH 467
+A + F+E + I W ++++ H
Sbjct: 503 KA-KNFIEENNINHEAIVWKTLLSACRLH 530
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 143/279 (51%), Gaps = 12/279 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN---LPRINVVSWTSLISGYVQ 152
+H ++ D FV + L+++Y KCG +E A VFD+ L R +W+++++GYVQ
Sbjct: 266 LHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQ 325
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N + E A+ +F ML G TL + AC+++ + G+Q+H V K + D +
Sbjct: 326 NGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPL 385
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
+++ +Y+ CG+L A F+R KN+ WT+++ + +G+ + F +M +E +
Sbjct: 386 ASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKM 445
Query: 273 QPNEFTLTSISSVCGTMLSLRVGA-QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
PNE TL + S C + + G + + G ++ N I+ LY + GL+D+A+
Sbjct: 446 TPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAK 505
Query: 332 KLFD--GMSHVNLVTWNAMIAG-----HAQMMDLAKDDL 363
+ ++H +V W +++ H + LA + L
Sbjct: 506 NFIEENNINHEAIV-WKTLLSACRLHQHNEYAKLASEKL 543
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 348/614 (56%), Gaps = 12/614 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V S Y S+ + C +L +HAH +K D V T +++Y KCG++ +A
Sbjct: 272 GIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADA 331
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
Q++F++LP+ ++ + ++I G V+N + A+ F +L++G ++L A +AC+S+
Sbjct: 332 QRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASI 391
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ G+Q+H+ VK + V NS+ +Y C +L+ A F+ + ++ +SW VI
Sbjct: 392 KGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVI 451
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +NG + L F+ ML ++P++FT S+ C + +L G ++H+ IK G
Sbjct: 452 AAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLG 511
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V +++ +Y KCG+++EA+K+ D + +V+WNA+IAG L K AH
Sbjct: 512 LDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAG----FTLLKHSEDAH-- 565
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
S F ++ +KPD +T++ +L C+ L ++ G+QIH +K SDV + +
Sbjct: 566 -----SFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITST 620
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG ++ ++ VF + + ++W +MI G+A H L +AL FE M L VRPN
Sbjct: 621 LVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPN 680
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
TFV L AC++ G + + L YF M EY ++P ++HY C+ID+ R G I EA I
Sbjct: 681 HATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLI 740
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
++M FE + VIW ++ C+ HGN+E+ A +L+L+P+D + +L +I+ AG W
Sbjct: 741 QEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWG 800
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V+ ++ + R KL + SWI +KD+V++F + HP+ EI+K+L L+++ K G
Sbjct: 801 KVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIG 860
Query: 669 YKQQESFELTDEES 682
Y F L DEES
Sbjct: 861 YIPDIDF-LIDEES 873
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 159/500 (31%), Positives = 270/500 (54%), Gaps = 25/500 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H IV+ G ++D + L+++Y KC ++++ K+F +P N V W+++I+G VQN +
Sbjct: 198 VHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDE 257
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
L + +F +M + G + + +C+ L ++++G Q+HA+ +K D +VG +
Sbjct: 258 HILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTA 317
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+Y+ CGSL A + FN + + ++ + +I C N + + L+FF +L G+ N
Sbjct: 318 TLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFN 377
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E +L+ S C ++ G Q+HSL +K SN+ V NSI+ +Y KC + EA +FD
Sbjct: 378 EISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFD 437
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSI 394
M + V+WNA+IA H Q NG E L++F+ + M+PD +T+ S+
Sbjct: 438 EMERRDAVSWNAVIAAHEQ------------NGNEEETLNLFASMLRLRMEPDQFTYGSV 485
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L CS AL G +IH +K+G D VG AL++MY KCG IE A ++ + +T+
Sbjct: 486 LKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTM 545
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SW ++I GF S A F +ML V+P+ T+ L AC+N V LG ++
Sbjct: 546 VSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASV--GLGK-QI 602
Query: 515 MQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNE--VIWSVFIAGCRRH 570
+ K++ D Y+ L+DM+ + G ++++ +K PN+ V W+ I G +H
Sbjct: 603 HGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEK---APNKDFVTWNAMICGYAQH 659
Query: 571 GNME--LGFYAAEQLLKLKP 588
G E LG++ QL ++P
Sbjct: 660 GLGEEALGYFERMQLENVRP 679
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 280/570 (49%), Gaps = 64/570 (11%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K++T S++ +QEC + SL + HA ++ +G D ++ L+ +Y +C ++ A K
Sbjct: 42 KIRTFSHI--IQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYK 99
Query: 131 VFDNL-------------------------------PRINVVSWTSLISGYVQNSQPELA 159
VF+ + P+ +VVSW S++SG++QN + +
Sbjct: 100 VFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKS 159
Query: 160 IHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
I VFLDM + + T L ACS LE LG Q+H +V+ D G++L
Sbjct: 160 IDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLD 219
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y+ C L+ ++K F+ I KN + W+ +I C +N E + GL F +M GI ++
Sbjct: 220 MYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSI 279
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
S+ C + +L+VG Q+H+ +K + S++ V + + +Y KCG + +AQ++F+ +
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+L +NA+I G + + G EAL F L SG+ + + S + C
Sbjct: 340 KHSLQCYNAIIVGCVR-----------NEKGFEALQFFQLLLKSGLGFNEISLSGAFSAC 388
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ + G Q+H+L++K+ S++ V ++++MY KC + A +F EM R +SW
Sbjct: 389 ASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWN 448
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS-----NAGMVYEALGYFE 513
++I + + L LF ML + P+Q T+ L ACS N+GM E
Sbjct: 449 AVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGM--------E 500
Query: 514 MMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG--CRR 569
+ + K +D ++ LIDM+ + G IEEA +++ + V W+ IAG +
Sbjct: 501 IHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIE-QQTMVSWNAIIAGFTLLK 559
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
H F+ + +KP D +YA++LD
Sbjct: 560 HSEDAHSFFYEMLKMSVKP-DNFTYAIVLD 588
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 218/459 (47%), Gaps = 64/459 (13%)
Query: 173 PTNV-TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
PT + T + CS S++ GKQ HA ++ D + N L +Y C LN A K
Sbjct: 40 PTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYK 99
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFF-----------SKMLSEGIQPNE---- 276
F ++ +++V+S+ T+I + GE FF + MLS +Q E
Sbjct: 100 VFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKS 159
Query: 277 --------------FTLTSISSV---CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
F T+ + V C + +G QVH L +++G+ ++ ++++
Sbjct: 160 IDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLD 219
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KC +D++ K+F + N V W+A+IAG Q ++ L +F ++
Sbjct: 220 MYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQ-----------NDEHILGLELFKEM 268
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
G+ ++S+ C+ L AL+ G Q+HA LK F SD+ VGTA ++MY KCG +
Sbjct: 269 QKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSL 328
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
A R+F + +L + ++I G + +ALQ F+ +L +G+ N+++ GA +AC
Sbjct: 329 ADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSAC 388
Query: 500 SNAGMVYEALGYFEMMQ-KEYKIKPVMDHYMC----LIDMFVRLGCIEEA---FDFIKKM 551
++ G + Q +K + +C ++DM+ + + EA FD +++
Sbjct: 389 ASIK------GDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERR 442
Query: 552 DFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
D V W+ IA ++GN E L +A+ L+++P
Sbjct: 443 D----AVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEP 477
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 170/359 (47%), Gaps = 45/359 (12%)
Query: 261 LRFFSKMLSEGIQPNEF-------TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
LR F+ +Q N+ T + I C SL+ G Q H+ I G+ ++ +
Sbjct: 21 LRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYI 80
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDL 363
N +M +YL+C ++ A K+F+ MS +++++N MI+G+A D K D+
Sbjct: 81 SNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDV 140
Query: 364 SAHNG----------GTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ N +++ +F + S + D TF+ +L CS L G Q+H
Sbjct: 141 VSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHG 200
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L ++ GF DVV G+AL++MY KC R++ + ++F E+ + + W+++I G +
Sbjct: 201 LIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHIL 260
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--C 530
L+LF++M G+ +Q + +C AG+ +G ++ K D +
Sbjct: 261 GLELFKEMQKVGIGVSQSIYASVFRSC--AGLSALKVGT-QLHAHALKCDFGSDITVGTA 317
Query: 531 LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE--QLL 584
+DM+ + G + +A F+ + K + ++ I GC R+ E GF A + QLL
Sbjct: 318 TLDMYAKCGSLADAQRIFNSLPKHSLQ----CYNAIIVGCVRN---EKGFEALQFFQLL 369
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/700 (31%), Positives = 370/700 (52%), Gaps = 32/700 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + + V L C ++ A+ IH + ++G Q V T L + Y + G++ +
Sbjct: 222 EGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQ 278
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++VFD +VVSW +++ Y Q+ A +F ML G P+ VTL A T CSS
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSS 338
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L R G+ IH ++ + D +GN+L +Y+ CGS A F RI N +SW T+
Sbjct: 339 L---RFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTM 394
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFT----LTSISSVCGTMLSLRVGAQVHSLGI 303
I + G+ + + F +M EG+ P T L +++S ++ G ++HS +
Sbjct: 395 IAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS---HVNLVTWNAMIAGHAQMMDLAK 360
GYAS + +++ +Y CG +DEA F + ++V+WNA+I+
Sbjct: 455 SCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIIS---------- 504
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
LS H G AL F +++ G+ P+ T ++L C+ AL +GE +H +G
Sbjct: 505 -SLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGME 563
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFED 479
S++ V TAL +MY +CG +E A +F +++ R ++ + +MI ++ + L+ +AL+LF
Sbjct: 564 SNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWR 623
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G RP++ +FV L+ACS+ G+ E F M++ Y I P DHY C +D+ R G
Sbjct: 624 MQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAG 683
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+ +A + I+ MD +P ++W + CR++ +++ G A + +L P D +Y +L +
Sbjct: 684 WLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSN 743
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I AG+W++ A V+ L + SWI IK +V+ F D HP+S EI++ L+
Sbjct: 744 ILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELER 803
Query: 660 LVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L + + GY L ++E HSE+LAIA G++++ + V+K+ +
Sbjct: 804 LHAEIREIGYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS-TDTVRVMKNLRV 862
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHN K I+ + +EI+VRD+ R H FV+G C+C D+
Sbjct: 863 CEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCSCGDY 902
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 263/514 (51%), Gaps = 33/514 (6%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + +++++L+ C LS IHA IV++G + L+++YG CG +
Sbjct: 122 EGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVAS 181
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +F+ + R ++VSW + I+ Q+ +A+ +F M G P +TL ALT C+
Sbjct: 182 AMLLFEKMER-DLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA- 239
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+IR + IH V + E V +L S Y+ G L A + F+R E++V+SW +
Sbjct: 240 --TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAM 297
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+GA ++G + F++ML EGI P++ TL + S+ C SLR G +H ++ G
Sbjct: 298 LGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGL 354
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ + N+++ +Y +CG +EA+ LF + N V+WN MIAG +Q + +
Sbjct: 355 DRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKR------- 406
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICS----RLVALEQGEQIHALTLKTGFLSDV 423
A+ +F ++ GM P T+ ++L + A+ +G ++H+ + G+ S+
Sbjct: 407 ----AVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEP 462
Query: 424 VVGTALVNMYKKCGRIERASRVFVE--MSTR-TLISWTSMITGFANHSLSHQALQLFEDM 480
+GTA+V MY CG I+ A+ F M R ++SW ++I+ + H +AL F M
Sbjct: 463 AIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRM 522
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVR 537
L GV PNQ+T V L AC+ A + E E++ + + + L M+ R
Sbjct: 523 DLHGVAPNQITCVAVLDACAGAAALTEG----EIVHDHLRHSGMESNLFVATALASMYGR 578
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G +E A + +K+ E + VI++ IA ++G
Sbjct: 579 CGSLESAREIFEKVAVERDVVIFNAMIAAYSQNG 612
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 260/529 (49%), Gaps = 32/529 (6%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V LL+ + + LS IHA IV G ++ L+ +Y KC ++ + ++VF L
Sbjct: 33 VRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG--NHLLRLYLKCESLGDVEEVFSRLEV 90
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+ SWT++I+ Y ++ Q + AI +F M + G VT L AC+ L + G+ I
Sbjct: 91 RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA++V+ + + + N L +Y +CG + SA+ F ++ E++++SW I A ++G+
Sbjct: 151 HAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDL 209
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
L F +M EG++P TL +VC T +R +H + + G L V ++
Sbjct: 210 GIALELFQRMQLEGVRPARITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTAL 266
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
Y + G + +A+++FD + ++V+WNAM+ +AQ H +EA +F+
Sbjct: 267 ASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQ-----------HGHMSEAALLFA 315
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
++ G+ P T + T CS +L G IH L+ G D+V+G AL++MY +CG
Sbjct: 316 RMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCG 372
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
E A +F + +SW +MI G + +A++LF+ M L G+ P + T++ L
Sbjct: 373 SPEEARHLFKRIPCNA-VSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLE 431
Query: 498 ACSNAGMVYEALGYFEMMQKE-----YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK-- 550
A ++ A+ + Y +P + ++ M+ G I+EA ++
Sbjct: 432 AVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGA 489
Query: 551 MDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAML 597
M+ + V W+ I+ +HG+ + LGF+ L + P A+L
Sbjct: 490 MEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVL 538
>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 923
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/691 (31%), Positives = 382/691 (55%), Gaps = 18/691 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K ++ SL+ C + ++ IH+ V +G H ++ LVN+Y G ++EA+
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLE 189
+F N+ R +V+SW ++IS YVQ++ A+ +L+ P N +T +AL ACSS E
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ G+ IHA +++ ++ +GNSL ++YS C S+ + F + +V+S + G
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLGYA 308
+ +R FS M GI+PN T+ ++ C ++ L G +H+ + G
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S+ + NS++ +Y CG ++ + +F +++ ++++WNA+IA + + H
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVR-----------HGR 531
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
G EA+ +F +G K D + + L+ + L +LE+G Q+H L++K G D V A
Sbjct: 532 GEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNA 591
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
++MY KCG+++ + + + R W ++I+G+A + +A F+ M+ G +P+
Sbjct: 592 TMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPD 651
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTFV L+ACS+AG++ + + Y+ M + + P + H +C++D+ RLG EA FI
Sbjct: 652 YVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFI 711
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+M PN++IW ++ R H N+++G AA+ LL+L P D +Y +L +++ + RW
Sbjct: 712 DEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWV 771
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV +++ + KL++ SW+++K++V +F D H + +I+ LDE++ K + G
Sbjct: 772 DVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVG 831
Query: 669 YKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y S L TDEE HSEKLA+A+GLL P S I + K+ +C DCH K
Sbjct: 832 YVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFK 891
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+++ + REI++RD R H+F +G C+C DF
Sbjct: 892 LVSMVFHREIVLRDPYRFHQFKHGSCSCSDF 922
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 241/504 (47%), Gaps = 24/504 (4%)
Query: 79 SLLQECVNR---KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
SL+ C +R + + IHA + G + ++ T L+++YG G + AQ++F +
Sbjct: 46 SLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEM 105
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P+ NVVSWT+++ N E A+ + M + G L T ++ C +LE G
Sbjct: 106 PQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGL 165
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+ A+VV SV NSL +++ + A + F+R+ E++ +SW +I
Sbjct: 166 QVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEE 225
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ S M ++P+ TL S+ SVC + + +G+ +HSL + G ++ + N
Sbjct: 226 VYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN 285
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y G +DEA+ LF MS ++++WN MI+ + Q N EAL
Sbjct: 286 ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQ-----------SNSCVEALET 334
Query: 376 FSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ L + P+ TFSS L CS AL G IHA+ L+ + +++G +L+ MY
Sbjct: 335 LGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYS 394
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KC +E RVF M ++S + G+A A+++F M G++PN +T +
Sbjct: 395 KCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMIN 454
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKP--VMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
C + G ++ + M Y + + D Y+ LI M+ G +E + +
Sbjct: 455 LQGTCKSLGDLHS----YGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSR 510
Query: 551 MDFEPNEVIWSVFIAGCRRHGNME 574
++ + + W+ IA RHG E
Sbjct: 511 IN-NKSVISWNAIIAANVRHGRGE 533
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 235/483 (48%), Gaps = 25/483 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+ AH+V +G V L+ ++G +++A+++FD + + +SW ++IS Y
Sbjct: 167 VTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEV 226
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
V DM P TL + ++ C+S + + LG IH+ V + N+
Sbjct: 227 YSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA 286
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML--SEGIQ 273
L ++YST G L+ A F + ++V+SW T+I + ++ V+ L ++L EG
Sbjct: 287 LVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-P 345
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN T +S C + +L G +H++ ++ + L + NS++ +Y KC +++ +++
Sbjct: 346 PNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERV 405
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F+ M ++V+ N + G+A + D+A A+ +FS + +G+KP+ T +
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVAN-----------AMRVFSWMRGTGIKPNYITMIN 454
Query: 394 ILTICSRLVALEQ-GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ C L L G +HA +TG LSD + +L+ MY CG +E ++ +F ++ +
Sbjct: 455 LQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK 514
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++ISW ++I H +A++LF D AG + ++ L++ +N + E
Sbjct: 515 SVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEG---- 570
Query: 513 EMMQKEYKIKPVMD---HYM-CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
M +K +D H + +DM+ + G ++ + P + W+ I+G
Sbjct: 571 -MQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQC-WNTLISGYA 628
Query: 569 RHG 571
R+G
Sbjct: 629 RYG 631
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 182/373 (48%), Gaps = 19/373 (5%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ESI 191
+P SW + +SG + A + M E + L + +TAC E
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G IHA + + +G +L LY + G + +A + F + ++NV+SWT ++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
NG + L + +M EG+ N L ++ S+CG + G QV + + G +++
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ ++ V +A++LFD M + ++WNAMI+ ++ +K
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSK----------- 229
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTIC--SRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+ S + +KPD+ T S++++C S LVAL G IH+L + +G V + AL
Sbjct: 230 CFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVAL--GSGIHSLCVSSGLHCSVPLINAL 287
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV-RPN 488
VNMY G+++ A +F MS R +ISW +MI+ + + +AL+ +L PN
Sbjct: 288 VNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPN 347
Query: 489 QVTFVGALAACSN 501
+TF AL ACS+
Sbjct: 348 SMTFSSALGACSS 360
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR +EA+ + + G K+ L N SL +H VK G D
Sbjct: 527 VRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDS 586
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V+ +++YGKCG M+ K + W +LISGY + + A F M+
Sbjct: 587 HVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSV 646
Query: 170 GNYPTNVTLGTALTACS 186
G P VT L+ACS
Sbjct: 647 GQKPDYVTFVALLSACS 663
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 235/723 (32%), Positives = 386/723 (53%), Gaps = 56/723 (7%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG----------NM 125
S+ LL + V + L + +HA VK+ ++ VN+Y KCG +
Sbjct: 10 SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69
Query: 126 EE---------------------AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
EE A+++FD P+ + VS+ +LISGY + A+ +F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
M E G TL + AC + + L KQ+H + V + +SV N+ + YS G
Sbjct: 130 RMRELGFEVDGFTLSGLIAACC--DRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 225 SLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
L A+ F + ++ +SW ++I A G++ E + L + +M+ +G + + FTL S+
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD---EAQKLFDGMSHV 340
+ ++ L G Q H IK G+ N V + ++ Y KCG D +++K+F +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSP 307
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+LV WN MI+G++ + ++ EA+ F ++ G +PD +F + + CS
Sbjct: 308 DLVLWNTMISGYSMNEEHSE----------EAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 401 LVALEQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L + QG+QIH L +K+ S+ + V AL+++Y K G + A RVF M +S+
Sbjct: 358 LSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNC 417
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
MI G+A H +AL+L++ ML +G+ PN +TFV L+AC++ G V E YF M++ +
Sbjct: 418 MIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETF 477
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
KI+P +HY C+ID+ R G +EEA FI M ++P V W+ + CR+H NM L A
Sbjct: 478 KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERA 537
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
A++L+ ++P Y ML +++ AG+WE++A V+ R +++ + SWI +K K +
Sbjct: 538 AKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV--------YHSEKL 691
F D HP E+ + L+E+++K K GY + + + E+ A +HSEKL
Sbjct: 598 FVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGEEEMRLGHHSEKL 657
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A+AFGL++T I+VVK+ +C DCHN IK ++++ REIIVRD+ R H F +G C+C
Sbjct: 658 AVAFGLMSTRDGEEIVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSC 717
Query: 752 RDF 754
D+
Sbjct: 718 GDY 720
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 56/420 (13%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
S ++ + E ++L + + + +G K+ + S+L + L H ++
Sbjct: 210 SMIVAYGQHKEGAKALALYKEM--IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 102 KTGSHQDFFVMTFLVNVYGKCG---NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PE 157
K G HQ+ V + L++ Y KCG M +++KVF + ++V W ++ISGY N + E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSE 327
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSL 216
A+ F M G+ P + + +ACS+L S GKQIH +K + SV N+L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNAL 387
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
SLY G+L A + F+R+ E N +S+ +I ++G + LR + +ML GI PN
Sbjct: 388 ISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNN 447
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T +I S C CG VDE QK F+
Sbjct: 448 ITFVAILSACA-----------------------------------HCGKVDEGQKYFNT 472
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M + A H M DL G E F +++ KP ++++L
Sbjct: 473 MKETFKIEPEAE---HYSCM----IDLLGRAGKLEEAERF--IDAMPYKPGSVAWAALLG 523
Query: 397 ICSRL--VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C + +AL + + ++ + V+ L NMY G+ E + V M + +
Sbjct: 524 ACRKHKNMALAERAAKELMVMQPLAATPYVM---LANMYADAGKWEEMASVRKSMRGKRI 580
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 331/610 (54%), Gaps = 49/610 (8%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L +C S S+ LGKQ+H+ ++ D + N L +LYS CG L++AI F + KN+
Sbjct: 59 LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNI 118
Query: 242 MSWTTVIGACGENGEAV-------------------------------QGLRFFSKMLSE 270
MS +I +G+ V +GL FS+M
Sbjct: 119 MSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNEL 178
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G P+EF L S+ C + +L G QVH K G+ NL V +S+ ++Y+KCG + E
Sbjct: 179 GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEG 238
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLY 389
++L M N+V WN +IAG AQ NG E L ++ + +G +PD
Sbjct: 239 ERLIRAMPSQNVVAWNTLIAGRAQ------------NGYPEEVLDQYNMMKMAGFRPDKI 286
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF S+++ CS L L QG+QIHA +K G V V ++L++MY +CG +E + +VF+E
Sbjct: 287 TFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLEC 346
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
++ W+SMI + H +A+ LF M + N VTF+ L ACS+ G+ + +
Sbjct: 347 ENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGI 406
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+F++M ++Y +KP ++HY C++D+ R G +EEA I+ M + + + W ++ C+
Sbjct: 407 KFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKI 466
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H E+ +E++ +L P+D Y +L +I S RW+DV+ V+ R+ KL + S
Sbjct: 467 HKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDVRKAMRDRKLKKEPGIS 526
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-----ESFELTDEESAS 684
W+ +K++++ F D HP+S EI L EL + K GY ++ D+E +
Sbjct: 527 WLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDIDSVLHDMDVEDKEYSL 586
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
V+HSEKLAIAF LL TP+ +PI V+K+ +C DCH IK I+ ++ REIIVRDS R H F
Sbjct: 587 VHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEISNREIIVRDSSRFHHF 646
Query: 745 VNGHCTCRDF 754
NG C+C D+
Sbjct: 647 KNGRCSCGDY 656
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 216/442 (48%), Gaps = 44/442 (9%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA---- 128
+ S + LLQ C++ SLS + +H+ I+ +G D F+ L+N+Y KCG ++ A
Sbjct: 51 EPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLF 110
Query: 129 ---------------------------QKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
+K+FD +P NV +W ++++G +Q E +
Sbjct: 111 GVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLG 170
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
+F M E G P LG+ L C+ L ++ G+Q+H YV K E + V +SL +Y
Sbjct: 171 LFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYM 230
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
CGSL + + +NV++W T+I +NG + L ++ M G +P++ T S
Sbjct: 231 KCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVS 290
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ S C + +L G Q+H+ IK G + + V +S++ +Y +CG ++ + K+F + +
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGD 350
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
+V W++MIA + H G EA+ +F+++ ++ + TF S+L CS
Sbjct: 351 VVCWSSMIAAYG-----------FHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHC 399
Query: 402 VALEQGEQIHALTL-KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTS 459
E+G + L + K G + T +V++ + G +E A + M + +I+W +
Sbjct: 400 GLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKT 459
Query: 460 MITGFANHSLSHQALQLFEDML 481
+++ H + A ++ E++
Sbjct: 460 LLSACKIHKKTEMARRISEEVF 481
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/346 (30%), Positives = 163/346 (47%), Gaps = 59/346 (17%)
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
RF S + SE P+ F+ + C + SL +G Q+HSL I G +S+ + N ++ LY
Sbjct: 43 RFSSHIWSE---PSLFS--HLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLY 97
Query: 322 LKCGLVD-------------------------------EAQKLFDGMSHVNLVTWNAMIA 350
KCG +D A+K+FD M N+ TWNAM+A
Sbjct: 98 SKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVA 157
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G Q E L +FS++N G PD + S+L C+ L AL G Q+
Sbjct: 158 GLIQF-----------EFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQV 206
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H K GF ++VV ++L +MY KCG + R+ M ++ +++W ++I G A +
Sbjct: 207 HGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYP 266
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP----VMD 526
+ L + M +AG RP+++TFV +++CS LG + + E IK ++
Sbjct: 267 EEVLDQYNMMKMAGFRPDKITFVSVISSCSELA----TLGQGQQIHAEV-IKAGASLIVS 321
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHG 571
LI M+ R GC+E + ++ E +V+ WS IA HG
Sbjct: 322 VISSLISMYSRCGCLEYSLKVF--LECENGDVVCWSSMIAAYGFHG 365
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/715 (32%), Positives = 389/715 (54%), Gaps = 39/715 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK-CGNME 126
EG S++ S+L + L E++ ++KTG D + T ++NVY + ++
Sbjct: 217 EGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALD 276
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF-LDMLEAGNYPTNVTLGTALTAC 185
A K FD + N +W+++I+ + + AI V+ D +++ P+ L T L C
Sbjct: 277 IAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKS--IPSQTALLTGLARC 334
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVG-NSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
G+ A ++ Q D V N++ + Y G ++ A + F+R+ +N +SW
Sbjct: 335 --------GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISW 386
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +NG + + L + G+ P+ +LTS C + +L G QVHSL +K
Sbjct: 387 AGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVK 446
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAK-- 360
G N V N+++ +Y KC ++ +++F+ M + V+WN+ IA Q M++ A+
Sbjct: 447 AGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHI 506
Query: 361 -DDLSAHN---------------GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
D++ + + G EA+ F + KP+ + +L++C L +
Sbjct: 507 FDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSA 566
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ G+QIH + +K G S+++V AL++MY KCG + + +VF M R + +W + ITG
Sbjct: 567 KLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSMEERDIFTWNTFITGC 625
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H L +A++++E M GV PN+VTFVG L ACS+AG+V E +F+ M ++Y + P+
Sbjct: 626 AQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPL 685
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
++HY C++D+ R G ++ A FI M EP+ VIWS + C+ H N E+G AAE+L
Sbjct: 686 LEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLF 745
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+P + +Y ML +I+ S G W +VA ++ + ++ +S+ SW++I++KV+SF D
Sbjct: 746 TTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGD 805
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
H + EI L +L + GY F L D +ES+ +YHSEKLA+A+GLL
Sbjct: 806 KQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLV 865
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP PI ++K+ +C DCH FIK ++ +T R+I +RD R H F NG C+C DF
Sbjct: 866 TPKGMPIQIMKNLRICGDCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDF 920
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/495 (27%), Positives = 236/495 (47%), Gaps = 66/495 (13%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+V Y M +A +F +P+ N+V+WT +ISGYV+ Q +F M G P
Sbjct: 163 MVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPD 222
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS-LNSAIKAF 233
+ L+A + L+ + + + + V+K E D +G S+ ++Y+ S L+ AIK F
Sbjct: 223 QSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFF 282
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + E+N +W+T+I A G + + + + I P++ L + + CG + R
Sbjct: 283 DGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSI-PSQTALLTGLARCGRITEAR 341
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+ + I + + N+++ Y++ G+VDEA++LFD M N ++W MIAG+A
Sbjct: 342 ILFEQIPDPIVVSW-------NAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYA 394
Query: 354 QMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
Q NG + EAL + L+ +GM P L + +S CS + ALE G Q+H+
Sbjct: 395 Q------------NGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHS 442
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L +K G + V AL++MY KC +E +VF M + +SW S I +++
Sbjct: 443 LAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLED 502
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK------------ 520
A +F++ML V V++ ++A + A EA+ +F+ M E++
Sbjct: 503 ARHIFDNMLSRDV----VSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLS 558
Query: 521 ------------------IKPVMDHYM----CLIDMFVRLGCIE--EAFDFIKKMDFEPN 556
IK MD + L+ M+ + GC + + FD +++ D
Sbjct: 559 VCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADSHKVFDSMEERDI--- 615
Query: 557 EVIWSVFIAGCRRHG 571
W+ FI GC +HG
Sbjct: 616 -FTWNTFITGCAQHG 629
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 134/592 (22%), Positives = 240/592 (40%), Gaps = 79/592 (13%)
Query: 39 RSGSKLIQLNGNSEPVRSLG----FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAE 94
RS + + + +S +R L +EA V P ++ S++ N L +A
Sbjct: 25 RSVHRALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDAR 84
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
I+ I S + T L++ Y + G + +A++VFD +P N V+W +++S YVQN
Sbjct: 85 ILFDAI----SGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNG 140
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+A +F M P+ D + N
Sbjct: 141 DITMARRLFDAM------PSR---------------------------------DVTSWN 161
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
S+ + Y + A F ++ ++N+++WT +I + +G F M EG P
Sbjct: 162 SMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASP 221
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK-CGLVDEAQKL 333
++ S+ S + L V + L +K G+ S++ + SI+ +Y + +D A K
Sbjct: 222 DQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKF 281
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FDGM N TW+ MIA +H G +A + P +
Sbjct: 282 FDGMVERNEYTWSTMIAA------------LSHGGRIDAAIAVYGRDPVKSIPSQTALLT 329
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTR 452
L C R+ A L +VV A++ Y + G ++ A +F M R
Sbjct: 330 GLARCGRIT--------EARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR 381
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
ISW MI G+A + S +AL L + + G+ P+ + + ACS+ G +
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGR--- 438
Query: 513 EMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
++ K + Y+C LI M+ + +E +M + + V W+ FIA ++
Sbjct: 439 QVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVK-DTVSWNSFIAALVQN 497
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED-VAVVKNLTREEK 621
+E + + +L +D S+ ++ + A R ++ V K + E +
Sbjct: 498 NMLEDARHIFDNMLS---RDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHE 546
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 3/208 (1%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
++L E K + LL C S + IH +K G + V L+++Y KCG
Sbjct: 540 TMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCG 599
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++ KVFD++ ++ +W + I+G Q+ AI ++ M G P VT L
Sbjct: 600 -CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLN 658
Query: 184 ACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIK-AFNRIREKNV 241
ACS + G Q + + Y + L G + A K ++ E +
Sbjct: 659 ACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDT 718
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLS 269
+ W+ ++GAC + A G R K+ +
Sbjct: 719 VIWSALLGACKIHKNAEIGRRAAEKLFT 746
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 224/738 (30%), Positives = 380/738 (51%), Gaps = 56/738 (7%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G S+ S+++ C + A +HA + K G + + +V +Y KCG+++ A
Sbjct: 141 GKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLA 200
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF------------------------- 163
+ VF ++ R ++ W S+I GY Q P A+ +F
Sbjct: 201 ETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGV 260
Query: 164 ------LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
++M G P +T G+ L+AC+S ++ G +HA +++ + D GN L
Sbjct: 261 QCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLI 320
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
+Y+ CG L+ A + F +RE + +SW ++I G L F++M + +EF
Sbjct: 321 DMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEF 380
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
L +I VC G +H IK G S+ V N+I+ +Y KCG D+A +F M
Sbjct: 381 ILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM 440
Query: 338 SHVNLVTWNAMIAGHAQMMDLAK-----DDLSAHNGGT---------------EALSIFS 377
N ++W AMI ++ D+ K D + N T E L ++
Sbjct: 441 PLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYV 500
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ S+G++PD TF++ + C+ L ++ G Q+ K G +V V ++V MY +CG
Sbjct: 501 SMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCG 560
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
I+ A F + + LISW +M+ FA + L + + FEDML +PN +++V L+
Sbjct: 561 LIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLS 620
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
CS+ G+V E YF+ M + + I P +H+ C++D+ R G +E+A D I+ M F+PN
Sbjct: 621 GCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNA 680
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+WS + CR H ++ L AA++L++L + E Y +L +++ +G ++VA ++ L
Sbjct: 681 TVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLM 740
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG-YKQQESFE 676
+ + + + SWI + ++V+ F ++ HPQ E++ L+E+++ + G Y ES
Sbjct: 741 KVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITVES-- 798
Query: 677 LTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+ YHSEKLA AFGLLN P PI V+K+ +C DCH IK+++ +T+RE+I+R
Sbjct: 799 --SVHRSKKYHSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCHLVIKLLSLVTSRELIMR 856
Query: 737 DSKRLHKFVNGHCTCRDF 754
D R H F +G C+C+D+
Sbjct: 857 DGYRFHHFKDGICSCKDY 874
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/573 (25%), Positives = 262/573 (45%), Gaps = 88/573 (15%)
Query: 91 SNAEIIHA--HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP-RI-NVVSWTSL 146
SN + H + + H++ F ++ M +A+K+FD +P R+ + VSWT++
Sbjct: 54 SNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTM 113
Query: 147 ISGYVQNSQPELAIHVFLDML----EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
ISGY QN + F M+ + G + + + AC SL RL Q+HA V
Sbjct: 114 ISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVS 173
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLN-------------------------------SAIK 231
K +T + NS+ +Y CG ++ A++
Sbjct: 174 KLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQ 233
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FNR+ E++ +SW T+I ++G VQ L F +M ++G PN T S+ S C +
Sbjct: 234 IFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSD 293
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L+ GA +H+ +++ ++ +L N ++ +Y KCG +D A+++F + + ++WN++I G
Sbjct: 294 LKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITG 353
Query: 352 HAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
H G G +AL +F+++ S + D + +IL +CS GE +
Sbjct: 354 ------------VVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELL 401
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA----- 465
H T+K+G S VG A++ MY KCG ++A VF M R ISWT+MIT F+
Sbjct: 402 HGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDI 461
Query: 466 --------------------------NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+ S + L+L+ M GV+P+ +TF ++ AC
Sbjct: 462 GKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRAC 521
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
++ +V + K + + + ++ M+ R G I+EA + +D + + +
Sbjct: 522 ADLAIVKLGMQVVTHATK-FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLIS 579
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
W+ +A ++G LG + + +C+
Sbjct: 580 WNAMLAAFAQNG---LGIKVIDTFEDMLKTECK 609
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 150/342 (43%), Gaps = 61/342 (17%)
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
T S + ++H+ I G S+L + N+++++Y CGL +A ++F H N+ TWN
Sbjct: 20 THKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNT 79
Query: 348 MI---AGHAQMMDL----------AKDDLS--------AHNG-GTEALSIFSKL----NS 381
MI ++M D KD +S + NG + + FS + N
Sbjct: 80 MIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTND 139
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
G D ++F+S++ C L Q+HAL K GF + + ++V MY KCG ++
Sbjct: 140 GGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDL 199
Query: 442 ASRVFVEMSTRTLISWTSMITG-------------------------------FANHSLS 470
A VF ++ +L W SMI G F+ H
Sbjct: 200 AETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFG 259
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAAC-SNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
Q L +F +M G PN +T+ L+AC S + + + A + +++ E+ + V +
Sbjct: 260 VQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGN-- 317
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LIDM+ + GC++ A K + E + + W+ I G G
Sbjct: 318 GLIDMYAKCGCLDLAKRVFKSLR-EHDHISWNSLITGVVHFG 358
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 3 SVPWAAAAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEA 62
++ W A + + + + + V++ S +Q NG SE G +
Sbjct: 445 TISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQ-NGFSEE----GLKLY 499
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+S+ + G + ++ + ++ C + + + H K G + V +V +Y +C
Sbjct: 500 VSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRC 559
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G ++EA+ FD++ +++SW ++++ + QN I F DML+ P +++ + L
Sbjct: 560 GLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVL 619
Query: 183 TACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-N 240
+ CS + + GK + + + + + L G L A + K N
Sbjct: 620 SGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPN 679
Query: 241 VMSWTTVIGAC 251
W+ ++G+C
Sbjct: 680 ATVWSALLGSC 690
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/625 (32%), Positives = 352/625 (56%), Gaps = 17/625 (2%)
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
P ++ + L+ + PE A+H+F++ML+ + P T+ AL +CS + ++ +G
Sbjct: 79 PPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVG 138
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ I AY VK D V +SL +Y++C + +A F+ + E V+ W +I A +N
Sbjct: 139 RGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKN 198
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ + F ML G+ +E TL S+ + CG + ++G V + G N +
Sbjct: 199 GNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLM 258
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KCG + +A++LFDGM ++V W+AMI+G+ Q + EAL+
Sbjct: 259 TALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQA-----------DQCREALA 307
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+FS++ + ++P+ T S+L+ C+ L ALE G+ +H+ + +++GTALV+ Y
Sbjct: 308 LFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYA 367
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I+ A F M + +WT++I G A + +AL+LF M A + P VTF+G
Sbjct: 368 KCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIG 427
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS++ +V E +F+ M ++Y IKP +HY C++D+ R G I+EA+ FI+ M E
Sbjct: 428 VLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN VIW ++ C H N+E+G A +Q++ L P Y +L +I+ S G+W++ A+++
Sbjct: 488 PNAVIWRALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIR 547
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
++ + +T S I + V F D HPQ EI++ ++E++++ K GY +
Sbjct: 548 KEMKDRGIEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTA 607
Query: 675 -----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
+ ++E + +HSEKLAIAFGL+ + I + K+ +C DCH+ K+I+ +
Sbjct: 608 DVRLEVDEHEKEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVY 667
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD R H F +G C+C D+
Sbjct: 668 NREIVVRDRNRFHHFKDGTCSCNDY 692
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 15/411 (3%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F E L V + P T + L+ C +L I A+ VK G D FV++ L+++
Sbjct: 106 FVEMLDVASVCPDQHTVA--CALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHM 163
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y C ++ AQ +FD + VV W ++I+ Y++N + +F MLE G +TL
Sbjct: 164 YASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITL 223
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ +TAC + +LGK + YV + + ++ +L +Y+ CG L A + F+ ++
Sbjct: 224 VSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQS 283
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V++W+ +I + + + L FS+M ++PN+ T+ S+ S C + +L G V
Sbjct: 284 RDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWV 343
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HS + + + + +++ Y KCG +D+A + F+ M N TW A+I G
Sbjct: 344 HSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG------- 396
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKT 417
++ + G EAL +FS + + ++P TF +L CS +E+G + ++T
Sbjct: 397 ----MATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDY 452
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
G +V++ + G I+ A + M + W ++++ A H
Sbjct: 453 GIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVH 503
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 334/578 (57%), Gaps = 16/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ ++ K H +++ E D ++ N L + YS CG + A + F+ + E+++
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+IG N + L F +M +EG + +EFT++S+ S CG ++H L
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K NL V +++ LY KCG++ +A ++F+ M + VTW++M+AG+ Q
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ------- 240
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL ++ + ++ + +T SS++ CS L AL +G+Q+HA+ K+GF S
Sbjct: 241 ----NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V V ++ V+MY KCG + + +F E+ + L W ++I+GFA H+ + + LFE M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ PN+VTF L+ C + G+V E +F++M+ Y + P + HY C++D+ R G +
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA++ IK + F+P IW +A CR + N+EL AAE+L +L+P++ ++ +L +I+
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIY 476
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+ +WE++A + L R+ + + SWI IKDKV++F + HP+ EI LD LV
Sbjct: 477 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 536
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + FGYK EL D +E + HSEKLA+ FGL+ P SP+ ++K+ +C
Sbjct: 537 IKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICV 596
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH F+K + T R IIVRD R H F +GHC+C DF
Sbjct: 597 DCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 189/364 (51%), Gaps = 12/364 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+LQ C ++ A+ H I++ D ++ L+N Y KCG +E A++VFD + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+VSW ++I Y +N A+ +FL+M G + T+ + L+AC K++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
VK + + VG +L LY+ CG + A++ F +++K+ ++W++++ +N +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L + + ++ N+FTL+S+ C + +L G Q+H++ K G+ SN+ V +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG + E+ +F + NL WN +I+G A+ H E + +F K+
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK-----------HARPKEVMILFEKM 355
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGR 438
GM P+ TFSS+L++C +E+G + L T G +VV + +V++ + G
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 439 IERA 442
+ A
Sbjct: 416 LSEA 419
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 166/326 (50%), Gaps = 20/326 (6%)
Query: 63 LSVLTEGPKVQTSSYVSLLQEC-VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
L + EG K + S+L C VN +L + +H VKT + +V T L+++Y K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAK 209
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG +++A +VF+++ + V+W+S+++GYVQN E A+ ++ TL +
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ ACS+L ++ GKQ+HA + K + V +S +Y+ CGSL + F+ ++EKN+
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W T+I ++ + + F KM +G+ PNE T +S+ SVCG + G + L
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 302 -GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL-----FDGMSHVNLVTWNAMIAG---- 351
G + N+ + ++ + + GL+ EA +L FD + + W +++A
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI----WGSLLASCRVY 445
Query: 352 -HAQMMDLAKD---DLSAHNGGTEAL 373
+ ++ ++A + +L N G L
Sbjct: 446 KNLELAEVAAEKLFELEPENAGNHVL 471
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 152/308 (49%), Gaps = 17/308 (5%)
Query: 268 LSEGIQPNEFT----LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+S G NEF+ + I +C ++ H I++ ++ + N ++ Y K
Sbjct: 49 VSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK 108
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG V+ A+++FDGM +LV+WN MI + + + +EAL IF ++ + G
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTR-----------NRMESEALDIFLEMRNEG 157
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
K +T SS+L+ C + +++H L++KT ++ VGTAL+++Y KCG I+ A
Sbjct: 158 FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAV 217
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+VF M ++ ++W+SM+ G+ + +AL L+ + NQ T + ACSN
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E ++ K V +DM+ + G + E++ ++ E N +W+
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSA-VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTI 335
Query: 564 IAGCRRHG 571
I+G +H
Sbjct: 336 ISGFAKHA 343
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 373 LSIFSKLNSSGMKPDLYT--FSS------ILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+S+ + + + P Y+ FS+ IL +C+R A+ + + H ++ DV
Sbjct: 38 ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 97
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ L+N Y KCG +E A +VF M R+L+SW +MI + + + +AL +F +M G
Sbjct: 98 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIE 542
+ ++ T L+AC G+ +AL ++ K ++ Y+ L+D++ + G I+
Sbjct: 158 FKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLK 587
+A + M + + V WS +AG ++ N E L Y Q + L+
Sbjct: 215 DAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 228/710 (32%), Positives = 389/710 (54%), Gaps = 24/710 (3%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P S+ Q L +T T ++ LL++C++ +S+S + I AH++K+G +
Sbjct: 44 PESSINNQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SG 102
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+ LV+ KCG+++ A++VFD + ++V+W SLI+ +++ + + A+ ++ M+
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIK 231
P TL + A S L + ++ H V E + VG++L +Y G A
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
+R+ EK+V+ T +I + GE + ++ F ML E +QPNE+T S+ CG +
Sbjct: 223 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G +H L +K G+ S L + S++ +YL+C LVD++ ++F + + N V+W ++I+G
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 352 HAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
Q NG E AL F K+ +KP+ +T SS L CS L E+G QI
Sbjct: 343 LVQ------------NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H + K GF D G+ L+++Y KCG + A VF +S +IS +MI +A +
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL LFE M+ G++PN VT + L AC+N+ +V E F+ +K+ KI DHY C
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYAC 509
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G +EEA + + P+ V+W ++ C+ H +E+ ++L+++P D
Sbjct: 510 MVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGD 568
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQ 649
+ ++ +++ S G+W V +K+ ++ KL + SW+ I + ++F D HP
Sbjct: 569 EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPN 628
Query: 650 SAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVS 704
S +I + L+EL++K+K GY + +S E T +E + HSEKLAIAF + +
Sbjct: 629 SEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRN-VGG 687
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I ++K+ +C DCH++IKI++ + REII RDSKR H F +G C+C D+
Sbjct: 688 SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDY 737
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/597 (33%), Positives = 339/597 (56%), Gaps = 18/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD+L+AG PT T +TAC+ +++ +++HA++ + D + NSL LY
Sbjct: 39 LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS+ A K F+ +R K+++SWT++I +N + + ML +PN FT S+
Sbjct: 99 CGSVLEARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
G +G Q+H+L +K + ++ V ++++ +Y +CG++D A +FD + N
Sbjct: 159 LKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNG 218
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+I+G A+ D G AL F+++ +G + +T+SS+ + +RL
Sbjct: 219 VSWNALISGFARKGD-----------GETALMTFAEMLRNGFEATHFTYSSVFSSIARLG 267
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
ALEQG+ +HA +K+ G L++MY K G + A +VF + + L++W +M+T
Sbjct: 268 ALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLT 327
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
FA + L +A+ FE+M +G+ NQVTF+ L ACS+ G+V E YFEMM KEY ++
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM-KEYDLE 386
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P +DH++ ++ + R G + A FI KM EP +W +A CR H N ++G +AA+
Sbjct: 387 PEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADH 446
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D +L +I+ S G+W+ A V+ + + + + SW+ +++ V+ F
Sbjct: 447 VFELDPDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVA 506
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGL 697
ND HP++ EI+K+ ++ +K + GY + L + E+ YHSEKLA+AF L
Sbjct: 507 NDDTHPRAEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFAL 566
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ P + I ++K+ +C DCH+ K I+ + REI+VRD+ R H F NG C+C D+
Sbjct: 567 IEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADY 623
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 194/377 (51%), Gaps = 18/377 (4%)
Query: 33 HTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSN 92
HT Y + + + S +R L +A L P+V Y + + C K+L +
Sbjct: 17 HTRPYTSTAANPVP--AASAVLRDLDLLDA-GELAPTPRV----YHTFITACAQSKNLED 69
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +HAH+ + D F+ L+++Y KCG++ EA+KVFD + R ++VSWTSLI+GY Q
Sbjct: 70 ARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMRRKDMVSWTSLIAGYAQ 129
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N PE AI + ML+ P T + L A + +G+QIHA VK +D V
Sbjct: 130 NDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYV 189
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
G++L +Y+ CG ++ A F+++ KN +SW +I G+ L F++ML G
Sbjct: 190 GSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGF 249
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+ FT +S+ S + +L G VH+ IK N+++ +Y K G + +A+K
Sbjct: 250 EATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARK 309
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+FD + +LVTWN M+ AQ + G EA+S F ++ SG+ + TF
Sbjct: 310 VFDRVDDKDLVTWNTMLTAFAQ-----------YGLGKEAVSHFEEMRKSGIYLNQVTFL 358
Query: 393 SILTICSRLVALEQGEQ 409
ILT CS +++G++
Sbjct: 359 CILTACSHGGLVKEGKR 375
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 1/197 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + +Y S+ +L + +HAH++K+ F L+++Y K G+
Sbjct: 244 MLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGS 303
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
M +A+KVFD + ++V+W ++++ + Q + A+ F +M ++G Y VT LTA
Sbjct: 304 MIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTA 363
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA-IKAFNRIREKNVMS 243
CS ++ GK+ + +Y E + ++ +L G LN A + F E
Sbjct: 364 CSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAV 423
Query: 244 WTTVIGACGENGEAVQG 260
W ++ AC + A G
Sbjct: 424 WGALLAACRMHKNAKVG 440
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/597 (34%), Positives = 340/597 (56%), Gaps = 18/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD+L+AG PT + +TAC+ +++ ++IHA++ + D + NSL +Y
Sbjct: 39 LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
C S+ A F+++R K+++SWT++I +N V+ + ML +PN FT S+
Sbjct: 99 CRSVLDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
G G Q+H+L +K G+ ++ V ++++ +Y +CG +D A +FD + N
Sbjct: 159 LKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+I+G A+ D G AL F+++ +G + +T+SS+ + +RL
Sbjct: 219 VSWNALISGFARKGD-----------GESALMTFAEMLRNGFEATHFTYSSVFSSIARLG 267
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
ALEQG+ +HA +K+ VG L++MY K G + A +VF + + L++W SM+T
Sbjct: 268 ALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLT 327
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
FA + L +A+ FE+M +GV NQ+TF+ L ACS+ G+V E YFEMM KEY ++
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMM-KEYDLE 386
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P +DHY+ ++ + R G + A FI KM EP +W +A CR H N ++G +AA+
Sbjct: 387 PEIDHYVTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADH 446
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D +L +I+ S G+W+ A V+ + + + + SW+ +++ V+ F
Sbjct: 447 VFELDPDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVA 506
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGL 697
ND HPQ+ EI+K+ E+ +K + GY + L ++E+ YHSEKLA+AF L
Sbjct: 507 NDDTHPQAEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFAL 566
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ P + I ++K+ +C DCH+ K I+ + REI+VRD+ R H F +G C+C D+
Sbjct: 567 IEMPAGATIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDY 623
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 181/344 (52%), Gaps = 15/344 (4%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L P+V Y S + C K+L +A IHAH+ + D F+ L+++Y KC ++
Sbjct: 47 LAPTPRV----YRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSV 102
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A+ VFD + R ++VSWTSLI+GY QN P AI + ML+ P T + L A
Sbjct: 103 LDARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAA 162
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ G+QIHA VK +D VG++L +Y+ CG ++ A F+++ KN +SW
Sbjct: 163 GAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I G+ L F++ML G + FT +S+ S + +L G VH+ IK
Sbjct: 223 ALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKS 282
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
V N+++ +Y K G + +A+K+FD + + +LVTWN+M+ AQ
Sbjct: 283 RQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQ----------- 331
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+ G EA+S F ++ SG+ + TF ILT CS +++G++
Sbjct: 332 YGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKR 375
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 124/237 (52%), Gaps = 2/237 (0%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N PV ++G + L K ++ SLL+ IHA VK G H+D
Sbjct: 130 NDMPVEAIGLLPGM--LKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDV 187
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V + L+++Y +CG M+ A VFD L N VSW +LISG+ + E A+ F +ML
Sbjct: 188 YVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRN 247
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G T+ T + ++ + L ++ GK +HA+V+K + + VGN+L +Y+ GS+ A
Sbjct: 248 GFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDA 307
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
K F+R+ K++++W +++ A + G + + F +M G+ N+ T I + C
Sbjct: 308 RKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTAC 364
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 336/601 (55%), Gaps = 13/601 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+++ C + +HAH++K+ L+++Y G +E A VF +
Sbjct: 262 TFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRI 321
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
P +++SW ++I+GY+Q A+++F D+L G Y P G+ +ACSSL + G
Sbjct: 322 PTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYG 381
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+H VK+ + G SLC +Y+ G L SA AF +I+ +++SW +I A +N
Sbjct: 382 KQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADN 441
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+A + + FF +M+ G+ P+ T S+ CG+ + L G Q+HS +K+G+ + V
Sbjct: 442 GDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVC 501
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC + +A +F +S + NLV+WNA+++ Q E
Sbjct: 502 NSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEG-----------ETF 550
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++ +++ SG KPD T +++L C+ L +L G Q+H ++K+G + DV V L++MY
Sbjct: 551 RLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMY 610
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG ++ A VF ++SW+S+I G+A L H+AL LF M GV+PN+VT++
Sbjct: 611 AKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYL 670
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
GAL+ACS+ G+V E ++ M+ E+ I P +H+ C++D+ R GC+ EA FI+K
Sbjct: 671 GALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGL 730
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ + W +A C+ H N+++ A +LKL P + + ML +I SAG WE+VA +
Sbjct: 731 DADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKL 790
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L ++ + + SWI +KDK + F D HPQ I+ +L+EL + GY +
Sbjct: 791 RKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDPCQ 850
Query: 674 S 674
S
Sbjct: 851 S 851
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 168/503 (33%), Positives = 268/503 (53%), Gaps = 29/503 (5%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ S+Y SL+ C N +SL A+ IH H++K+ + ++N+YGKCG+M++A+KVF
Sbjct: 158 EPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVF 217
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
D + NVVSWTS+ISGY QN Q AI +++ M +G +P +T G+ + AC I
Sbjct: 218 DTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDID 277
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LG+Q+HA+V+K + N+L S+Y+ G + A F RI K+++SW T+I
Sbjct: 278 LGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYI 337
Query: 253 ENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ G V+ L F +L +G QPNEF S+ S C ++L L G QVH + +K G N+
Sbjct: 338 QLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNV 397
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
S+ +Y K G + A+ F + + ++V+WNA+IA A D E
Sbjct: 398 FAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGD-----------ANE 446
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ F ++ G+ PD T+ S+L C V L QG QIH+ +K GF ++ V +L+
Sbjct: 447 AIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLT 506
Query: 432 MYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
MY KC + A VF ++S L+SW ++++ + +L+++M +G +P+ +
Sbjct: 507 MYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSI 566
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKP--VMDHYMC--LIDMFVRLGCIEEA-- 544
T L C+ +LG + Y IK ++D +C LIDM+ + G ++ A
Sbjct: 567 TITTLLGTCAEL----TSLGVGNQVHC-YSIKSGLILDVSVCNGLIDMYAKCGSLKHARD 621
Query: 545 -FDFIKKMDFEPNEVIWSVFIAG 566
FD + +D V WS I G
Sbjct: 622 VFDSTQNLDI----VSWSSLIVG 640
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 93/185 (50%), Gaps = 2/185 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K + + +LL C SL +H + +K+G D V L+++Y KCG+++ A
Sbjct: 560 GNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHA 619
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ VFD+ +++VSW+SLI GY Q A+++F M G P VT AL+ACS +
Sbjct: 620 RDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHI 679
Query: 189 ESIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTT 246
+ G +++ + ++ + + L + G L+ A + + ++ +W T
Sbjct: 680 GLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKT 739
Query: 247 VIGAC 251
++ AC
Sbjct: 740 LLAAC 744
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/670 (33%), Positives = 368/670 (54%), Gaps = 31/670 (4%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ V G+ A+++FDN+P+ + + ++LIS + AI ++ + E G P
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163
Query: 175 NVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
A AC+ S +++R+ K++H + D VGN+L Y C + A + F
Sbjct: 164 MPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 222
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + ++V+SWT++ + G +G+ F +M G++PN T++SI C + L+
Sbjct: 223 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 282
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA--- 350
G ++H ++ G NL V ++++ LY KC V EA+ +FD M H ++V+WN ++
Sbjct: 283 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 342
Query: 351 -------GHAQMMDLAKDDLSA-------------HNGGTE-ALSIFSKLNSSGMKPDLY 389
G + + +++D + A NG +E A+ +F K+ G KP+
Sbjct: 343 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 402
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T SSIL CS L G++IH + + D+ TAL+ MY KCG + + VF M
Sbjct: 403 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 462
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ +++W +MI A H +AL LF+ MLL+ V+PN VTF G L+ CS++ +V E +
Sbjct: 463 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 522
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F M +++ ++P +HY C++D++ R G + EA+ FI+ M EP W +A CR
Sbjct: 523 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRV 582
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+ N+EL +A++L +++P + +Y L +I V+A W + + V+ L +E +++T S
Sbjct: 583 YKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 642
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESAS-- 684
W+++ +KV++F D + +S +I+ LDELVEK K GYK + L D EE A
Sbjct: 643 WLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESL 702
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSEKLA+AFG+LN S I V K+ +C DCHN IK ++ + I+VRDS R H F
Sbjct: 703 CNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHF 762
Query: 745 VNGHCTCRDF 754
NG+C+C+D
Sbjct: 763 KNGNCSCKDL 772
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 218/456 (47%), Gaps = 52/456 (11%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ G K +++ + C + +H + G D FV L++ YGKC
Sbjct: 154 SLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCK 213
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+E A++VFD+L +VVSWTSL S YV+ P + VF +M +G P +T+ + L
Sbjct: 214 CVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILP 273
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ L+ ++ GK+IH + V++ + V ++L SLY+ C S+ A F+ + ++V+S
Sbjct: 274 ACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS 333
Query: 244 -----------------------------------WTTVIGACGENGEAVQGLRFFSKML 268
W VIG C ENG + + + F KM
Sbjct: 334 WNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ 393
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G +PNE T++SI C +LR+G ++H + +L +++Y+Y KCG ++
Sbjct: 394 KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 453
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
++ +FD M ++V WN MI +A H G EAL +F K+ S ++P+
Sbjct: 454 LSRNVFDMMRRKDVVAWNTMIIANAM-----------HGNGKEALFLFDKMLLSRVQPNS 502
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFV 447
TF+ +L+ CS +E+G QI + + D + +V++Y + GR+ A +
Sbjct: 503 VTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQ 562
Query: 448 EMSTR-TLISWTSMITG---FANHSLSH-QALQLFE 478
M T +W +++ + N L+ A +LFE
Sbjct: 563 GMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE 598
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 172/372 (46%), Gaps = 46/372 (12%)
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
T + +G L + G N A + F+ I + + + +T+I A +G + + ++ +S
Sbjct: 94 TNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYS 153
Query: 266 KMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+ GI+P+ + + C + +LRV +VH + G S++ V N++++ Y KC
Sbjct: 154 SLQERGIKPDMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKC 212
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
V+ A+++FD + ++V+W ++ + + + + + +F ++ SG+
Sbjct: 213 KCVEGARRVFDDLVVRDVVSWTSLSSCYVKC-----------GFPRKGMDVFREMGWSGV 261
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
KP+ T SSIL C+ L L+ G++IH ++ G + ++ V +ALV++Y KC + A
Sbjct: 262 KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARM 321
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
VF M R ++SW ++T + + + LF M GVR ++ T+ + C G
Sbjct: 322 VFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGR 381
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
EA+ F MQ KM F+PNE+ S +
Sbjct: 382 SEEAVEMFRKMQ---------------------------------KMGFKPNEITISSIL 408
Query: 565 AGCRRHGNMELG 576
C N+ +G
Sbjct: 409 PACSFSENLRMG 420
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C ++L + IH ++ + D T L+ +Y KCG++ ++ VFD + R
Sbjct: 406 SILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRK 465
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VV+W ++I + + A+ +F ML + P +VT L+ CS + G QI
Sbjct: 466 DVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIF 525
Query: 199 AYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGE 256
+ + + E D + + + +YS G LN A K + E +W ++ AC +
Sbjct: 526 NSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC-RVYK 584
Query: 257 AVQGLRFFSKMLSEGIQPN 275
V+ + +K L E I+PN
Sbjct: 585 NVELAKISAKKLFE-IEPN 602
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/565 (34%), Positives = 330/565 (58%), Gaps = 11/565 (1%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H VKTG FV + L+++Y K G + + KVFD +P N V+WT++I+G V+
Sbjct: 138 LHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E + F M + + AL A + ++ G+ IH +K ++++ V NS
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L ++Y+ CG L+ + F ++R +V+SWTT++ A + G+ GL+ F +M + + PN
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E+T +++ S C L+ G Q+H+ + +G+ + L V NSIM LY KCG + K+F
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M +++TW+ +IA ++Q+ G EA S++ S G KP+ + +S+L
Sbjct: 378 SMKFRDIITWSTIIAAYSQV-----------GYGEEAFEYLSRMRSEGPKPNEFALASVL 426
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
++C + LEQG+Q+HA L G +V +AL+ MY KCG I AS++F++ +I
Sbjct: 427 SVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDII 486
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWT+MI+G+A H S +A++LFE++ G+RP+ VTF+G L ACS+AGMV YF M
Sbjct: 487 SWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSM 546
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
K+Y I P +HY C+ID+ R G + +A I+ M + ++V+WS + CR HG+++
Sbjct: 547 SKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDC 606
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G AA ++LKL P ++ L +IF + G+W++ A ++ L + + + + WS +++KD
Sbjct: 607 GQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKD 666
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDEL 660
V++F D HPQ +I+ +L+EL
Sbjct: 667 SVFAFVSGDRSHPQGEDIYNILEEL 691
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/599 (25%), Positives = 262/599 (43%), Gaps = 72/599 (12%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLG 179
K ++++A+ +FD LP+ + VSWT++ISGYV +S A+ +F M L++ L
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
L C + G +H + VK + VG++L +Y G + + K F+ + +
Sbjct: 121 LGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTR 180
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
N ++WT VI G + GL +FS M ++ + + +L G +H
Sbjct: 181 NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIH 240
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ +K G+ N V NS+ +Y KCG +D F M +++V+W ++ + QM
Sbjct: 241 TQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM---G 297
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
K+D L F ++ +S + P+ YTFS++++ C+ L+ GEQ+HA L GF
Sbjct: 298 KEDC--------GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF 349
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
++ + V +++ +Y KCG + S+VF M R +I+W+++I ++ +A +
Sbjct: 350 VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSR 409
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVR 537
M G +PN+ L+ C + ++ + ++ + +C LI M+ +
Sbjct: 410 MRSEGPKPNEFALASVLSVCGSMAILEQGK---QLHAHVLSVGLEQTSMVCSALIIMYAK 466
Query: 538 LGCIEEA----------------------------------FDFIKKMDFEPNEVIWSVF 563
G I EA F+ I+K+ P+ V +
Sbjct: 467 CGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGV 526
Query: 564 IAGCRRHGNMELGFYAAEQLLK---LKPKDCESYAMLLDIFVSAGR-------------- 606
+ C G ++LGFY + K + P E Y ++D+ AGR
Sbjct: 527 LTACSHAGMVDLGFYYFNSMSKDYHITPSK-EHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN-DGLHPQSAEIFKVLDELVEKA 664
W+DV V L R ++ D R +V PN G H A IF + E A
Sbjct: 586 WDDV-VWSTLLRACRIHGDVDCGQ-RAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAA 642
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 179/332 (53%), Gaps = 11/332 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y L+ + +L++ IH +K G ++ FV L +Y KCG ++ F +
Sbjct: 219 AYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM 278
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
++VVSWT++++ Y+Q + + + F M + P T ++ C++ ++ G+
Sbjct: 279 RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGE 338
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HA+V+ + SV NS+ +LYS CG L S K F ++ +++++W+T+I A + G
Sbjct: 339 QLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVG 398
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + S+M SEG +PNEF L S+ SVCG+M L G Q+H+ + +G V +
Sbjct: 399 YGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCS 458
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG + EA K+F ++++W AMI+G+A+ H EA+ +
Sbjct: 459 ALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE-----------HGHSQEAIEL 507
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
F + G++PD TF +LT CS ++ G
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTACSHAGMVDLG 539
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ + D + N+ + L A F+++ +++ +SWT +I + ++ + LR
Sbjct: 43 FSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRL 102
Query: 264 FSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
FSKM L ++ + F L+ CG L+ G +H +K G +++ V ++++ +Y+
Sbjct: 103 FSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYM 162
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNS 381
K G + + K+FD M N VTW A+I G + G +EA L+ FS +
Sbjct: 163 KIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA------------GYSEAGLAYFSGMGR 210
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
S ++ D Y ++ L + AL G IH TLK GF + V +L MY KCG+++
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
F +M T ++SWT+++T + LQ F+ M + V PN+ TF ++ C+N
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 502 ----------------AGMV------------YEALGYFEMMQKEY---KIKPVMDHYMC 530
G V Y G + K + K + ++ +
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIIT-WST 389
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELG 576
+I + ++G EEAF+++ +M E PNE + ++ C +E G
Sbjct: 390 IIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG 438
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 8/213 (3%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EGPK + S+L C + L + +HAH++ G Q V + L+ +Y KCG++
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIA 471
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
EA K+F + + +++SWT++ISGY ++ + AI +F ++ + G P +VT LTACS
Sbjct: 472 EASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACS 531
Query: 187 SLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSA---IKAFNRIREKNVM 242
+ LG + K Y + L G L+ A I++ I+ +V+
Sbjct: 532 HAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSM-PIQWDDVV 590
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
W+T++ AC +G+ G R +++L + PN
Sbjct: 591 -WSTLLRACRIHGDVDCGQRAAAEVLK--LDPN 620
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/593 (35%), Positives = 335/593 (56%), Gaps = 25/593 (4%)
Query: 175 NVTLGTALTACSSL-----ESIRLGKQIHAYVVKYQTE-DDTSVGNSLC-SLYSTCGSLN 227
+ T LT C SL S KQIHA+ +++ ++ +G L ++ S ++
Sbjct: 10 STTPENPLTKCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMS 69
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F I NV +W T+I E+ F+ +M+ ++P+ T +
Sbjct: 70 YAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAIS 129
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
L++R G +HS+ I+ G+ S + V+NS++++Y CG + A K+F+ M +LV WN+
Sbjct: 130 KSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNS 189
Query: 348 MIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
MI G A NG EAL++F +++ G++PD +T S+L+ + L ALE
Sbjct: 190 MINGFAL------------NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALEL 237
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G ++H LK G + V +L+++Y KCG I A RVF EMS R +SWTS+I G A
Sbjct: 238 GRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVGLAV 297
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
+ +AL+LF++M G+ P+++TFVG L ACS+ GM+ E YF M++E I P ++
Sbjct: 298 NGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIE 357
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C++D+ R G +++A+++I+ M +PN VIW + C HG++ LG A LL L
Sbjct: 358 HYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNL 417
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+PK Y +L +++ S RW DV V++ ++ + +T +S + + ++VY F D
Sbjct: 418 EPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTPGYSLVELGNRVYEFTMGDRS 477
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTP 701
HPQS +++ +L+++ E K GY + L D +E A YHSEK+AIAF LLNTP
Sbjct: 478 HPQSQDVYALLEKITELLKLEGYVPHTANVLADIEEEEKEQALSYHSEKVAIAFMLLNTP 537
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+PI V+K+ +C DCH IK+I + REI++RD R H F G C+C+D+
Sbjct: 538 PGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVIRDRSRFHHFRGGSCSCKDY 590
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 203/447 (45%), Gaps = 48/447 (10%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT--FLV 116
F + ++ P+ + +SLLQ C + K + IHA ++ G + M +
Sbjct: 2 FHVTTNFVSTTPENPLTKCISLLQFCASSKH--KLKQIHAFSIRHGVSLNNPDMGKHLIF 59
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+ M A VF + NV +W ++I GY ++ P A + M+ + P
Sbjct: 60 TIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTH 119
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L A S ++R G+ IH+ ++ E V NSL +Y+ CG SA K F +
Sbjct: 120 TYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELM 179
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+E+++++W ++I NG + L F +M EG++P+ FT+ S+ S + +L +G
Sbjct: 180 KERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGR 239
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+VH +K+G + N V NS++ LY KCG + EAQ++F MS N V+W ++I G
Sbjct: 240 RVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIVG----- 294
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
L+ + G EAL +F ++ G+ P TF +L CS L++G +
Sbjct: 295 ------LAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEY------ 342
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
M ++CG I R + M+ + L QA +
Sbjct: 343 ------------FRRMKEECGIIPRIEH------------YGCMVDLLSRAGLVKQAYEY 378
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAG 503
++M V+PN V + L AC+ G
Sbjct: 379 IQNM---PVQPNAVIWRTLLGACTIHG 402
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/670 (33%), Positives = 368/670 (54%), Gaps = 31/670 (4%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ V G+ A+++FDN+P+ + + ++LIS + AI ++ + E G P
Sbjct: 18 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77
Query: 175 NVTLGTALTACS-SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
A AC+ S +++R+ K++H + D VGN+L Y C + A + F
Sbjct: 78 MPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVF 136
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + ++V+SWT++ + G +G+ F +M G++PN T++SI C + L+
Sbjct: 137 DDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK 196
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA--- 350
G ++H ++ G NL V ++++ LY KC V EA+ +FD M H ++V+WN ++
Sbjct: 197 SGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYF 256
Query: 351 -------GHAQMMDLAKDDLSA-------------HNGGTE-ALSIFSKLNSSGMKPDLY 389
G + + +++D + A NG +E A+ +F K+ G KP+
Sbjct: 257 KNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEI 316
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T SSIL CS L G++IH + + D+ TAL+ MY KCG + + VF M
Sbjct: 317 TISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMM 376
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ +++W +MI A H +AL LF+ MLL+ V+PN VTF G L+ CS++ +V E +
Sbjct: 377 RRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGV 436
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F M +++ ++P +HY C++D++ R G + EA+ FI+ M EP W +A CR
Sbjct: 437 QIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRV 496
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+ N+EL +A++L +++P + +Y L +I V+A W + + V+ L +E +++T S
Sbjct: 497 YKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCS 556
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESAS-- 684
W+++ +KV++F D + +S +I+ LDELVEK K GYK + L D EE A
Sbjct: 557 WLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESL 616
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSEKLA+AFG+LN S I V K+ +C DCHN IK ++ + I+VRDS R H F
Sbjct: 617 CNHSEKLAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHF 676
Query: 745 VNGHCTCRDF 754
NG+C+C+D
Sbjct: 677 KNGNCSCKDL 686
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 218/456 (47%), Gaps = 52/456 (11%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ G K +++ + C + +H + G D FV L++ YGKC
Sbjct: 68 SLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCK 127
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+E A++VFD+L +VVSWTSL S YV+ P + VF +M +G P +T+ + L
Sbjct: 128 CVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILP 187
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ L+ ++ GK+IH + V++ + V ++L SLY+ C S+ A F+ + ++V+S
Sbjct: 188 ACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVS 247
Query: 244 -----------------------------------WTTVIGACGENGEAVQGLRFFSKML 268
W VIG C ENG + + + F KM
Sbjct: 248 WNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQ 307
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G +PNE T++SI C +LR+G ++H + +L +++Y+Y KCG ++
Sbjct: 308 KMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLN 367
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
++ +FD M ++V WN MI +A H G EAL +F K+ S ++P+
Sbjct: 368 LSRNVFDMMRRKDVVAWNTMIIANAM-----------HGNGKEALFLFDKMLLSRVQPNS 416
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFV 447
TF+ +L+ CS +E+G QI + + D + +V++Y + GR+ A +
Sbjct: 417 VTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQ 476
Query: 448 EMSTR-TLISWTSMITG---FANHSLSH-QALQLFE 478
M T +W +++ + N L+ A +LFE
Sbjct: 477 GMPMEPTASAWGALLAACRVYKNVELAKISAKKLFE 512
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 172/372 (46%), Gaps = 46/372 (12%)
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
T + +G L + G N A + F+ I + + + +T+I A +G + + ++ +S
Sbjct: 8 TNIPSHLGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYS 67
Query: 266 KMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+ GI+P+ + + C + +LRV +VH + G S++ V N++++ Y KC
Sbjct: 68 SLQERGIKPDMPVFLAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKC 126
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
V+ A+++FD + ++V+W ++ + + + + + +F ++ SG+
Sbjct: 127 KCVEGARRVFDDLVVRDVVSWTSLSSCYVKC-----------GFPRKGMDVFREMGWSGV 175
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
KP+ T SSIL C+ L L+ G++IH ++ G + ++ V +ALV++Y KC + A
Sbjct: 176 KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARM 235
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
VF M R ++SW ++T + + + LF M GVR ++ T+ + C G
Sbjct: 236 VFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGR 295
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
EA+ F MQ KM F+PNE+ S +
Sbjct: 296 SEEAVEMFRKMQ---------------------------------KMGFKPNEITISSIL 322
Query: 565 AGCRRHGNMELG 576
C N+ +G
Sbjct: 323 PACSFSENLRMG 334
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 4/199 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C ++L + IH ++ + D T L+ +Y KCG++ ++ VFD + R
Sbjct: 320 SILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRK 379
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VV+W ++I + + A+ +F ML + P +VT L+ CS + G QI
Sbjct: 380 DVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIF 439
Query: 199 AYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGE 256
+ + + E D + + + +YS G LN A K + E +W ++ AC +
Sbjct: 440 NSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAAC-RVYK 498
Query: 257 AVQGLRFFSKMLSEGIQPN 275
V+ + +K L E I+PN
Sbjct: 499 NVELAKISAKKLFE-IEPN 516
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 225/733 (30%), Positives = 363/733 (49%), Gaps = 86/733 (11%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA I+K+G+ D ++ L+ Y +A + ++P V S++SLI +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+I VF M G P L C+ L + + GKQIH + D V SL
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSL 157
Query: 217 CSLYSTCGSLNSAIKAFNRIREK-----------------------------------NV 241
+Y CG + A K F+R+ EK N+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNI 217
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW ++ +G + + F KM G P++ T++S+ G +L +G Q+H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGY 277
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD---------------GMSH------- 339
IK G + V ++++ +Y K G V KLFD G+S
Sbjct: 278 VIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKA 337
Query: 340 -------------VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+N+V+W ++IAG AQ KD EAL +F ++ +G+KP
Sbjct: 338 LEMFGLFKEQKMELNVVSWTSIIAGCAQN---GKD--------IEALELFREMQVAGVKP 386
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ T S+L C + AL G H ++ L DV VG+AL++MY KCGRI+ + VF
Sbjct: 387 NRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVF 446
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
M T+ L+ W S++ G++ H + + + +FE ++ ++P+ ++F L+AC G+
Sbjct: 447 NMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E YF MM +EY IKP ++HY C++++ R G ++EA+D IK++ FEP+ +W +
Sbjct: 507 EGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNS 566
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR N++L AA++L L+P++ +Y ++ +I+ + G W +V ++N L +
Sbjct: 567 CRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVY 686
SWI++K+KVY+ D HPQ +I + +DE+ E+ + G++ F L D E
Sbjct: 627 GCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQE 686
Query: 687 -----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
HSEKLA+ FGLLNTP +P+ V+K+ +C DCH IK I+S REI +RD+ R
Sbjct: 687 QMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRF 746
Query: 742 HKFVNGHCTCRDF 754
H F +G C+C DF
Sbjct: 747 HHFKDGICSCGDF 759
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 141/549 (25%), Positives = 237/549 (43%), Gaps = 98/549 (17%)
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q HA ++K ++D + L + YS N A I + V S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
Q + FS+M S G+ P+ L ++ VC + + + G Q+H + G + V+
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQG 155
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLSA 365
S+ ++Y++CG + +A+K+FD MS ++VT +A++ G+A+ + ++ K +
Sbjct: 156 SLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEP 215
Query: 366 H----NG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ NG EA+ +F K++ G PD T SS+L L G QIH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIH 275
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR------------------- 452
+K G L D V +A+++MY K G + ++F E
Sbjct: 276 GYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVD 335
Query: 453 ----------------TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
++SWTS+I G A + +AL+LF +M +AGV+PN+VT L
Sbjct: 336 KALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSML 395
Query: 497 AACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDF 553
AC N ALG+ ++ + D ++ LIDM+ + G I+ + + M
Sbjct: 396 PACGNIA----ALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMS-QIVFNMMP 450
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKPKDCESYAMLLDIFVSAGRWEDVA 611
N V W+ + G HG + E L+ +LKP D S+ LL G
Sbjct: 451 TKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVG------ 503
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
LT E W + + + Y KP E + + L+ +A K
Sbjct: 504 ----LTDE-------GWKYFNMMSEEYGIKPR-------LEHYSCMVNLLGRAG----KL 541
Query: 672 QESFELTDE 680
QE+++L E
Sbjct: 542 QEAYDLIKE 550
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 336/594 (56%), Gaps = 22/594 (3%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G + +T + CS+ +++ GK++H ++ E V N+L ++Y
Sbjct: 46 MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A F+ + E+NV+SWTT+I A N + L+ M EG++PN FT +S+
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRA 164
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C + +LR Q+H IK G S++ VR++++ +Y K +D A +FD M +LV W
Sbjct: 165 CDGLPNLR---QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVW 221
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
N++I G AQ D G EAL++F ++ +G D T +S+L C+ L LE
Sbjct: 222 NSIIGGFAQNSD-----------GNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLE 270
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G Q+H LK F D+++ AL++MY KCG +E A+ F M + +ISW++M+ G A
Sbjct: 271 LGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ S QAL+LFE M +G RPN +T +G L ACS+AG+V + YF M+K + + P
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY CLID+ R G ++EA I +M+ EP+ V W + CR H N++L YAA+++++
Sbjct: 389 EHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE 448
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L+P+D +Y +L +I+ + RWEDVA V+ + +T SWI + +++ F D
Sbjct: 449 LEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFILGDT 508
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNT 700
HP+ EI + L++L+E+ GY +F L D +E + YHSEKLAI FGL+N
Sbjct: 509 SHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFGLMNL 568
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + K+ +C DCH F K+++ + R I++RD R H F +G C+C D+
Sbjct: 569 SREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDY 622
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 200/396 (50%), Gaps = 23/396 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y L++ C R ++ + +H HI G FV+ L+N+Y K +EEA+ +FD +
Sbjct: 57 TYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEM 116
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P NVVSWT++IS Y N + A+ + M G P T + L AC L ++R
Sbjct: 117 PERNVVSWTTMISAY-SNKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNLR--- 172
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H ++K E D V ++L +YS L++A+ F+ + ++++ W ++IG +N
Sbjct: 173 QLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNS 232
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + L F +M G ++ TLTS+ C + L +G QVH +K + +L + N
Sbjct: 233 DGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNN 290
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
+++ +Y KCG +++A F M ++++W+ M+AG AQ NG +AL
Sbjct: 291 ALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQ------------NGYSRQALE 338
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG--TALVNM 432
+F + SG +P+ T +L CS +E+G + ++K F D L+++
Sbjct: 339 LFESMKESGSRPNYITVLGVLFACSHAGLVEKG-WYYFRSMKKLFGVDPGREHYGCLIDL 397
Query: 433 YKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ GR++ A ++ EM ++W +++ H
Sbjct: 398 LGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVH 433
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 147/289 (50%), Gaps = 7/289 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+ EG + +Y S+L+ C L N +H I+KTG D FV + L++VY K +
Sbjct: 146 MFREGVRPNMFTYSSVLRAC---DGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSD 202
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A VFD +P ++V W S+I G+ QNS A+++F M AG TL + L A
Sbjct: 203 LDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRA 262
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L + LG+Q+H +V+K+ + D + N+L +Y CGSL A AF+R+ EK+V+SW
Sbjct: 263 CTGLALLELGRQVHVHVLKF--DQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISW 320
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGI 303
+T++ +NG + Q L F M G +PN T+ + C + G S+
Sbjct: 321 STMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKK 380
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
G ++ L + G +DEA KL M + VTW ++
Sbjct: 381 LFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGA 429
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/388 (28%), Positives = 179/388 (46%), Gaps = 56/388 (14%)
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ +R M G+ + T + + C +++ G +VH GY + V N+++
Sbjct: 38 RAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLL 97
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y+K L++EA+ LFD M N+V+W MI+ ++ ++ +AL
Sbjct: 98 NMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN------------DKALKCLIL 145
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G++P+++T+SS+L C L L Q+H +KTG SDV V +AL+++Y K
Sbjct: 146 MFREGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSD 202
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A VF EM TR L+ W S+I GFA +S ++AL LF+ M AG +Q T L A
Sbjct: 203 LDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRA 262
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
C+ G+ LG ++ K + LIDM+ + G +E+A +M E + +
Sbjct: 263 CT--GLALLELGR-QVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRM-VEKDVI 318
Query: 559 IWSVFIAG-----------------------------------CRRHGNMELGFYAAEQL 583
WS +AG C G +E G+Y +
Sbjct: 319 SWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSM 378
Query: 584 LKLKPKDC--ESYAMLLDIFVSAGRWED 609
KL D E Y L+D+ AGR ++
Sbjct: 379 KKLFGVDPGREHYGCLIDLLGRAGRLDE 406
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 362/671 (53%), Gaps = 22/671 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + IHA +++ +H D L+ YGKCG + A+++FD +P N VS L+SG
Sbjct: 27 LCTGKAIHAQMIRA-AHFDVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMSG 85
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y + A L +L+A ++ N L TAL+A + + S +G+Q H Y VK ++
Sbjct: 86 YASAGRHSDA----LALLKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQE 141
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V N++ +Y C + A+K F + ++ ++ ++I + GE +R M+
Sbjct: 142 HPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMV 201
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
E Q + + ++ C + L +G QVH+ +K N+ V ++++ +Y KC
Sbjct: 202 GEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCAR 261
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+A F+ + N+V+W A++ + Q +AL +F L G++P+
Sbjct: 262 DAHSAFEVLPEKNVVSWTAVMTAYTQNERF-----------EDALQLFLDLEIEGVRPNE 310
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+T++ L C+ L AL+ G + A +KTG + V AL+NMY K G I A RVF+
Sbjct: 311 FTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLS 370
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M R ++SW S+I G+A+H L+ +A+ +F DMLLA + P+ VTFVG L AC+ G+V E
Sbjct: 371 MPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEG 430
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
L Y +M KE IKP +HY C++ + R G ++EA FI + V W ++ C+
Sbjct: 431 LYYLNIMMKEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQ 490
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ N LG AEQ+L+LKP D +Y +L +++ A RW+ V V+ L RE + +
Sbjct: 491 VYKNYGLGHRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGV 550
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS---- 684
SWI++ +V+ F D H +I L EL+ + K GY + L D E+
Sbjct: 551 SWIQVGSEVHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEH 610
Query: 685 -VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+YHSEK+A+AFGL+++P I ++K+ +C DCH IK+I+ +T R+I+VRD+ R H
Sbjct: 611 LMYHSEKMALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHC 670
Query: 744 FVNGHCTCRDF 754
+G C+C D+
Sbjct: 671 IDDGVCSCDDY 681
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F++AL + EG + +Y L C +L N + A +KTG V
Sbjct: 291 FEDALQLFLDLEIEGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGALSVCNA 350
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y K G++ +A +VF ++P +VVSW S+I GY + A+ VF DML A P+
Sbjct: 351 LMNMYSKSGSIHDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPS 410
Query: 175 NVTLGTALTACSSLESIR-----LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
VT L AC+ L + L + +K E T + LC G L+ A
Sbjct: 411 YVTFVGVLLACAQLGLVDEGLYYLNIMMKEMGIKPGREHYTCMVGLLCR----AGRLDEA 466
Query: 230 IK-AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ + +V++W +++ +C G R ++L ++PN+
Sbjct: 467 EQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRVAEQILQ--LKPND 512
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/597 (33%), Positives = 338/597 (56%), Gaps = 18/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD L++G PT +TAC+ +++ ++IH ++ + E D + NSL LY
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS+ A K F+++R+K+++SWT++I +N + + ML +PN FT S+
Sbjct: 99 CGSVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
G +G Q+H+L +K + ++ V ++++ +Y +CG +D A +FD + N
Sbjct: 159 LKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+I+G A+ D G AL +F+++ +G + +T+SSI + + +
Sbjct: 219 VSWNALISGFARKGD-----------GETALMVFAEMQRNGFEATHFTYSSIFSGLAGIG 267
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
ALEQG+ +HA +K+ VG +++MY K G + A +VF + + L++W SM+T
Sbjct: 268 ALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT 327
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
FA + L +A+ FE+M +G+ NQ+TF+ L ACS+ G+V E YF+M+ KEY ++
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMI-KEYNLE 386
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P ++HY+ ++D+ R G + A FI KM EP +W +A CR H N ++G +AA+
Sbjct: 387 PEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADH 446
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D +L +I+ S G W+ A V+ + + + + SW+ I + V+ F
Sbjct: 447 VFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVA 506
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGL 697
ND HP++ EI+K+ DE+ K + GY + L DE+ YHSEK+A+AF L
Sbjct: 507 NDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFAL 566
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ P + I ++K+ +C DCH+ K I+ + REI+VRD+ R H F NG C+C D+
Sbjct: 567 IQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDY 623
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 199/403 (49%), Gaps = 16/403 (3%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L P+V Y + + C K+L +A IH H+ + D F+ L+++Y KCG++
Sbjct: 47 LAPTPRV----YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSV 102
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
EA KVFD + + ++VSWTSLI+GY QN P AI + ML+ P T + L A
Sbjct: 103 VEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA 162
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ +G QIHA VK +D VG++L +Y+ CG ++ A F+++ KN +SW
Sbjct: 163 GAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I G+ L F++M G + FT +SI S + +L G VH+ +K
Sbjct: 223 ALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKS 282
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
V N+++ +Y K G + +A+K+F+ + + +LVTWN+M+ AQ
Sbjct: 283 RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ----------- 331
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
+ G EA+S F ++ SG+ + TF ILT CS +++G+ + + ++
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEH 391
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+V++ + G + A +M T W +++ H
Sbjct: 392 YVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+ AL V E G + +Y S+ +L + +HAH+VK+ FV +
Sbjct: 235 ETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTM 294
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y K G+M +A+KVF+ + ++V+W S+++ + Q + A+ F +M ++G Y
Sbjct: 295 LDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQ 354
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA-IKAFN 234
+T LTACS ++ GK + +Y E + ++ L G LN A + F
Sbjct: 355 ITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFK 414
Query: 235 RIREKNVMSWTTVIGAC 251
E W ++ AC
Sbjct: 415 MPMEPTAAVWGALLAAC 431
>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/709 (31%), Positives = 380/709 (53%), Gaps = 22/709 (3%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++E L V EG K +Y+S+++ C N ++ E+I A I+++ + T
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++YG+CG ++ A+ + +++ + +VV+W ++++ QN AIH+ M G
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAF 233
VT + L AC++LE++ G++IHA V+ + + +VGNS+ ++Y CG +A+ F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ K+ +SW VI A N + L F M EG++ NEFTL S+ CG + L+
Sbjct: 421 EAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLK 480
Query: 294 VGAQVHSLGIKLGYASN-LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
+ Q+H+ G+ N V NS++ +Y +CG + +A+K FD + LV W+ ++A +
Sbjct: 481 LARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAY 540
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
AQ D G A F ++ + G+KP TF S L C+ + LE G +H
Sbjct: 541 AQSKD---------GPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHR 591
Query: 413 LTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
+GF+ + +V+G ++NMY KCG A VF +M + LISW S+I +A++ +
Sbjct: 592 RAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHAL 651
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL ++MLL G P+ T V L S+AG++ + +F +++ ++P CL
Sbjct: 652 EALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCL 711
Query: 532 IDMFVRLGCIEEAFDFI-KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
+D+ R G ++ A + I + + + W +A C+ +G+ + G AE++ +L+P+
Sbjct: 712 VDLLARKGFLDAAEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQH 771
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
S+ +L +++ S GRW D + ++ + + + SWI + V+ F + HP+
Sbjct: 772 SGSFVVLANLYASVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKI 831
Query: 651 AEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSP 705
EI + L++L + + GY + E D+E HSE+LAI FGL++T
Sbjct: 832 REICEDLEKLTLRMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGET 891
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I VVK+ +C DCH KII+S+ REI+VRDS R H F +G C+C DF
Sbjct: 892 IRVVKNLRVCSDCHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDF 940
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/515 (30%), Positives = 261/515 (50%), Gaps = 23/515 (4%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + T EG + +V L C L + IH+ +V +G + +
Sbjct: 39 YREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNS 98
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LVN+YGKC ++ A+KVFD + +VVSWT++++ Y QN A+ M G P
Sbjct: 99 LVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPN 158
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT T + C+ L + LG++IH ++ E D +GN+L +Y +CGS + F+
Sbjct: 159 QVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFS 218
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R+ + +V+ WTT+I C +NG+ +GL F KM EG++ NE T S+ VC + +++
Sbjct: 219 RMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKE 278
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G + + ++ + S+ + S++ LY +CG++D A+ L + M ++V WNAM+ AQ
Sbjct: 279 GEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQ 338
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
D EA+ + +++ G + T+ S+L C+ L AL QG +IHA
Sbjct: 339 NGD-----------NWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARV 387
Query: 415 LKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
L G L +V VG +++ MY KCG+ E A VF M + +SW ++I +S A
Sbjct: 388 LLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDA 447
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L+LF M L G+R N+ T + L AC + A +++
Sbjct: 448 LELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVN 507
Query: 534 MFVRLGCI---EEAFDFIKKMDFEPNEVIWSVFIA 565
M+ R G + ++AFD ++ E V WS+ +A
Sbjct: 508 MYARCGSLLDAKKAFDSLE----EKGLVAWSIILA 538
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 233/452 (51%), Gaps = 22/452 (4%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKC + +A VFD + NV SWT +++ Y QN A+ +F M G P V
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
AL AC++ + G+QIH+ VV + + NSL ++Y C + A K F+ +
Sbjct: 61 FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++V+SWT ++ +NG Q L S+M +EG++PN+ T +I VC + L +G +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H I G + + N+++++Y CG D+ + +F M +++ W MIAG +Q
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQ--- 237
Query: 358 LAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
NG E L +F K++ G+K + T+ S++ +C L A+++GE I A L+
Sbjct: 238 ---------NGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILE 288
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+ F S ++ T+L+++Y +CG ++RA + M R +++W +M+T A + + +A+ L
Sbjct: 289 SPFCSSTLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHL 348
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LI 532
M + G N+VT++ L AC+N EAL + + ++ + +I
Sbjct: 349 LRRMDMEGFGANKVTYLSVLEACAN----LEALSQGREIHARVLLCGLLQREVAVGNSVI 404
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
M+ + G E A + M ++V W+ I
Sbjct: 405 TMYGKCGQTEAAMSVFEAMP-RKDDVSWNAVI 435
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 15/259 (5%)
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSK 378
+Y KC V +A +FDG+S N+ +W M+A ++Q NG EAL +F++
Sbjct: 1 MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQ------------NGHYREALELFTR 48
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G +PD F L C+ L+ G QIH+ + +G S++++ +LVNMY KC
Sbjct: 49 MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQD 108
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A +VF M R ++SWT+M+ +A + QAL+ M GV+PNQVTFV +
Sbjct: 109 VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDV 168
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
C+ ++ + E ++P L+ M+ G ++ +M + + +
Sbjct: 169 CAKLRLLDLGRKIHHRIINE-GLEPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVL 226
Query: 559 IWSVFIAGCRRHGNMELGF 577
+W+ IAGC ++G E G
Sbjct: 227 LWTTMIAGCSQNGQYEEGL 245
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/613 (32%), Positives = 342/613 (55%), Gaps = 11/613 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V S++ S+ + C +L +H H +KT D + T +++Y KC N+ +A
Sbjct: 270 GVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDA 329
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
QK+F++LP N+ S+ ++I GY ++ + A+ +F + ++G V+L A AC+ +
Sbjct: 330 QKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVI 389
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ G Q+H +K + + V N++ +Y CG+L A F + ++ +SW +I
Sbjct: 390 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAII 449
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +NG + L F ML G++P+EFT S+ C +L G ++H+ IK
Sbjct: 450 AAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLG 509
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V +++ +Y KCG++++A+KL D ++ +V+WNA+I+G S
Sbjct: 510 LDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG-----------FSLQKQ 558
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA FSK+ G+ PD +T+++IL C+ LV +E G+QIHA +K SD + +
Sbjct: 559 SEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISST 618
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG ++ +F + R ++W +M+ G+A H L +AL++FE M L V+PN
Sbjct: 619 LVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPN 678
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
TF+ L AC + G+V + L YF M Y + P ++HY C++D+ R G + +A + I
Sbjct: 679 HATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELI 738
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M FE + VIW ++ C+ HGN+E+ AA +L+L+P+D +Y +L +I+ +AG W
Sbjct: 739 EGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWN 798
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+V ++ + R L + SWI IK +V++F D HP+S EI++ LD L ++ K G
Sbjct: 799 EVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVG 858
Query: 669 YKQQESFELTDEE 681
Y F L D+E
Sbjct: 859 YMPDTDFILNDDE 871
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/582 (29%), Positives = 286/582 (49%), Gaps = 53/582 (9%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P ++L S K +T S++ QEC +RK+L + HA ++ T FV
Sbjct: 23 PFKTLPISPFSSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEFKPTVFVT 80
Query: 113 TFLVNVYGKCGNME-------------------------------EAQKVFDNLPRINVV 141
L+ +Y KC ++E AQK+FD +P +VV
Sbjct: 81 NCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVV 140
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SW SLISGY+ N I VFL M G T L +CSSLE G QIH
Sbjct: 141 SWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLA 200
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
VK + D G++L +Y+ C L+ +I+ F+ + EKN +SW+ +I C +N + GL
Sbjct: 201 VKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGL 260
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F +M G+ ++ T S+ C + +LR+G+Q+H +K + +++ + + + +Y
Sbjct: 261 ELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMY 320
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
+KC + +AQKLF+ + + NL ++NA+I G+A+ + G EAL +F L
Sbjct: 321 MKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYAR-----------SDKGIEALGMFRLLQK 369
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
SG+ D + S C+ + +G Q+H L++K+ S++ V A+++MY KCG +
Sbjct: 370 SGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVE 429
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A VF EM +R +SW ++I + + L LF ML +G+ P++ T+ L AC+
Sbjct: 430 ACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAG 489
Query: 502 AGMVYEALGY-FEMMQKEYKIKPVMDHY--MCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
++AL E+ + K + +D + + LIDM+ + G +E+A ++ E V
Sbjct: 490 ----WQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA-EQTVV 544
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESYAMLLD 599
W+ I+G E ++L++ D +YA +LD
Sbjct: 545 SWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 586
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 161/539 (29%), Positives = 275/539 (51%), Gaps = 31/539 (5%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G +++ +L+ C + + IH VK G D + L+++Y KC ++ +
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCS 228
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ F ++P N VSW+++I+G VQN + +F +M +AG + T + +C+ L
Sbjct: 229 IQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGL 288
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++RLG Q+H + +K D +G + +Y C +L+ A K FN + N+ S+ +I
Sbjct: 289 SALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAII 348
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ + ++ L F + G+ +E +L+ C + G QVH L +K
Sbjct: 349 VGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 408
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
SN+ V N+I+ +Y KCG + EA +F+ M + V+WNA+IA H Q NG
Sbjct: 409 SNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ------------NG 456
Query: 369 GTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
E LS+F + SGM+PD +T+ S+L C+ AL G +IH +K+ D VG
Sbjct: 457 NEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGI 516
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG +E+A ++ ++ +T++SW ++I+GF+ S +A + F ML GV P
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 576
Query: 488 NQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIE 542
+ T+ L C+N +V LG + ++++KE + D Y+ L+DM+ + G ++
Sbjct: 577 DNFTYATILDTCAN--LVTVELGKQIHAQIIKKELQ----SDAYISSTLVDMYSKCGNMQ 630
Query: 543 EAFDFIKKMDFEPNE--VIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAML 597
DF + PN V W+ + G +HG E L + QL +KP A+L
Sbjct: 631 ---DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVL 686
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NGN E SL + +L G + +Y S+L+ C ++L+ IH I+K+
Sbjct: 455 NGNEEKTLSL----FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGL 510
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV L+++Y KCG ME+A+K+ D L VVSW ++ISG+ Q E A F ML
Sbjct: 511 DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML 570
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
E G P N T T L C++L ++ LGKQIHA ++K + + D + ++L +YS CG++
Sbjct: 571 EMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQ 630
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
F + ++ ++W ++ ++G + L+ F M E ++PN T ++ CG
Sbjct: 631 DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACG 690
Query: 288 TMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTW 345
M + G HS+ G L + ++ + + G V +A +L +GM + V W
Sbjct: 691 HMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIW 750
Query: 346 NAMIA 350
+++
Sbjct: 751 RTLLS 755
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 335/605 (55%), Gaps = 13/605 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+++ C + +H H++K+G L+++Y + G + A VF +
Sbjct: 260 TFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMI 319
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
+++SW S+I+G+ Q A+++F DM G Y P G+ +AC SL G
Sbjct: 320 STKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFG 379
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+QIH K+ + G SLC +Y+ G L SAI+AF +I +++SW +I A ++
Sbjct: 380 RQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDS 439
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + + FF +M+ G+ P+ T S+ CG+ +++ G Q+HS IK+G V
Sbjct: 440 GDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVC 499
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC + +A +F +S + NLV+WNA+++ Q H E
Sbjct: 500 NSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQ-----------HKQAGEVF 548
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F + S KPD T ++IL C+ L +LE G Q+H ++K+G + DV V L++MY
Sbjct: 549 RLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMY 608
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG ++ A VF ++SW+S+I G+A L H+AL LF M GV+PN+VT++
Sbjct: 609 AKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYL 668
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS+ G+V E ++ M+ E I P +H C++D+ R GC+ EA +FIKKM F
Sbjct: 669 GVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGF 728
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P+ +W +A C+ HGN+++ AAE +LKL P + + +L +I S G W++VA +
Sbjct: 729 NPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARL 788
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+NL ++ + + SWI +KD+++ F D H Q +I+ +L++L + GY +
Sbjct: 789 RNLMKQMGVQKVPGQSWIAVKDQIHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDPCQ 848
Query: 674 SFELT 678
+++
Sbjct: 849 RLDIS 853
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/589 (29%), Positives = 289/589 (49%), Gaps = 53/589 (8%)
Query: 59 FQEALSVLTEGPK-----VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
++EAL PK +++S+Y +L+ C + +SL + IH HI+K+ D +
Sbjct: 137 YREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQN 196
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
++N+YGKCG++++A+K FD + NVVSWT +ISGY QN Q AI +++ ML++G +P
Sbjct: 197 HILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFP 256
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T G+ + AC I LG+Q+H +V+K + N+L S+Y+ G + A F
Sbjct: 257 DPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVF 316
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSL 292
I K+++SW ++I + G ++ L F M +G QPNEF S+ S C ++L
Sbjct: 317 TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEP 376
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G Q+H + K G N+ S+ +Y K G + A + F + +LV+WNA+IA
Sbjct: 377 EFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAF 436
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ D+ EA+ F ++ +G+ PD TF S+L C V + QG QIH+
Sbjct: 437 SDSGDV-----------NEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHS 485
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSH 471
+K G + V +L+ MY KC + A VF ++S L+SW ++++ H +
Sbjct: 486 YIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAG 545
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACS----------------NAGMV---------- 505
+ +LF+ ML + +P+ +T L C+ +G+V
Sbjct: 546 EVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLI 605
Query: 506 --YEALGYFEMMQKEY--KIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEV 558
Y G + + + P + + LI + + G EA F +K + +PNEV
Sbjct: 606 DMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEV 665
Query: 559 IWSVFIAGCRRHGNMELG--FYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++ C G +E G FY ++ P E + ++D+ AG
Sbjct: 666 TYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAG 714
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/696 (30%), Positives = 372/696 (53%), Gaps = 23/696 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K +Y + L C L +++HA V G + FV LV++Y +CG+M EA++
Sbjct: 111 KADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARR 170
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE- 189
VFD + VSW SL+SGY++ E + VF M + LG+ + CS +
Sbjct: 171 VFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDG 230
Query: 190 SIR-LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S+R + + +H VVK + D + +++ +Y+ G+L+ A+ F + + NV+ + +I
Sbjct: 231 SVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMI 290
Query: 249 GACGENGEAV------QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+ AV + L +S++ S G++P EFT +S+ C + G Q+H
Sbjct: 291 AGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQV 350
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+K + + + ++++ LY +++ + F + ++VTW AMI+G Q +
Sbjct: 351 LKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFER-- 408
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
AL++F +L G+KPD +T SS++ C+ L + GEQ+ K+GF
Sbjct: 409 ---------ALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRF 459
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+G + ++MY + G +E A + F EM + ++SW+++I+ A H + QALQ F +M+
Sbjct: 460 TAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVG 519
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
A V PN++TF+G L ACS+ G+V E L Y+E+M+ EY + P + H C++D+ R G +
Sbjct: 520 AKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLA 579
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
+A FI+ F V+W + CR H +ME G A+++++L+P Y L ++++
Sbjct: 580 DAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYL 639
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
AG + +++L +E + + SWI ++ ++SF D HP+ I+ L E++
Sbjct: 640 DAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHPECNAIYTKLAEMLS 699
Query: 663 KAKCFGYKQQESFELTD----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K E + E++ HSEKLA+A G+++ P +PI V+K+ +CRDC
Sbjct: 700 KIDKLTTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQSAPIRVMKNLRVCRDC 759
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H+ +K+I+ REII+RD R H F +G C+C D+
Sbjct: 760 HSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDY 795
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 256/506 (50%), Gaps = 27/506 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK--CGNMEEAQKVFDN 134
Y+ L+ C SL A +H HI + F+ L+ Y + G+ +A+++ D
Sbjct: 16 YLHHLRSCA---SLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDE 72
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRL 193
+PR N VS+ LI Y + Q E ++ FL A + T AL ACS ++
Sbjct: 73 MPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKE 132
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GK +HA V + V NSL S+Y+ CG + A + F+ E++ +SW +++
Sbjct: 133 GKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLR 192
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-GTMLSLR-VGAQVHSLGIKLGYASNL 311
G + LR F+ M + N F L S+ C G S+R + VH +K G ++L
Sbjct: 193 VGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL 252
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT- 370
+ ++++ +Y K G + EA LF + N+V +NAMIAG L +D+ + H
Sbjct: 253 FLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAG------LCRDEAAVHKEVVR 306
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EALS++S+L S GM+P +TFSS++ C+ +E G+QIH LK F D +G+AL+
Sbjct: 307 EALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALI 366
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y +E R F + + +++WT+MI+G + L +AL LF ++L G++P+
Sbjct: 367 DLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPF 426
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFD 546
T + AC++ +V E MQ + K D + + I M+ R G +E A
Sbjct: 427 TISSVMNACASLAVVRTG----EQMQC-FATKSGFDRFTAMGNSCIHMYARSGNVEAAIQ 481
Query: 547 FIKKMDFEPNEVI-WSVFIAGCRRHG 571
++M E ++V+ WS I+ +HG
Sbjct: 482 RFQEM--ESHDVVSWSAIISSHAQHG 505
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 199/421 (47%), Gaps = 31/421 (7%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS--AIKAFNRIREK 239
L +C+SL +H ++ + + N+L + Y G+ ++ A + + + +
Sbjct: 20 LRSCASLPQ---AAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76
Query: 240 NVMSWTTVIGACGENGEAVQGLR-FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
N +S+ +I A G+ + L F + ++ + FT + + C L+ G V
Sbjct: 77 NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+L + G A + V NS++ +Y +CG + EA+++FD + V+WN++++G+ +
Sbjct: 137 HALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLR---- 192
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG--EQIHALTLK 416
+ AH E L +F+ + M + + S++ CS +G E +H +K
Sbjct: 193 ----VGAHE---EMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVK 245
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA------NHSLS 470
G +D+ + +A+V+MY K G + A +F + ++ + +MI G + +
Sbjct: 246 AGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVV 305
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV-YEALGYFEMMQKEYKIKPVMDHYM 529
+AL L+ ++ G+ P + TF + AC+ AG + + + ++++ ++ +
Sbjct: 306 REALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGS-- 363
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLK 587
LID++ C+E+ F + + + + V W+ I+GC ++ E +LL LK
Sbjct: 364 ALIDLYFNSACMEDGFRCFRSVP-KQDVVTWTAMISGCVQNELFERALALFHELLGVGLK 422
Query: 588 P 588
P
Sbjct: 423 P 423
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+ AL++ E G K + S++ C + + E + K+G + +
Sbjct: 406 FERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNS 465
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+++Y + GN+E A + F + +VVSW+++IS + Q+ A+ F +M+ A P
Sbjct: 466 CIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPN 525
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKA 232
+T LTACS + G + + ++K + +V + C L G L A +A
Sbjct: 526 EITFLGVLTACSHGGLVDEGLRYYE-IMKMEYGLCPTVKHCTCVVDLLGRAGRLADA-EA 583
Query: 233 FNR--IREKNVMSWTTVIGAC 251
F R I + W +++G+C
Sbjct: 584 FIRDSIFHDEPVVWQSLLGSC 604
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 351/663 (52%), Gaps = 83/663 (12%)
Query: 74 TSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+S + LL C+ K S + +HA ++K+G + F+ L++ Y KCG++E+ +++F
Sbjct: 19 SSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLF 78
Query: 133 DNLPRINVVSWTS-------------------------------LISGYVQNSQPELAIH 161
D +P+ NV +W S ++SG+ Q+ + E A++
Sbjct: 79 DKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALY 138
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
F M + G T + L+ACS L + G QIH+ + K D +G++L +YS
Sbjct: 139 YFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYS 198
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
CG++N A + F+ + ++NV+SW ++I +NG AV+ L+ F ML ++P+E TL S
Sbjct: 199 KCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLAS 258
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASN-LRVRNSIMYLYLKCGLVDEAQKLFDG---- 336
+ S C ++ +++VG +VH+ +K+ N + + N+ + +Y KC + EA+ +FD
Sbjct: 259 VISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 337 ---------------------------MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
M+ N+V+WNA+IAG+ Q NG
Sbjct: 319 NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ------------NGE 366
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL------SD 422
EALS+F L + P YTF++IL C+ L L G Q H LK GF D
Sbjct: 367 NEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+ VG +L++MY KCG +E VF +M R +SW +MI GFA + ++AL+LF +ML
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLD 486
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
+G +P+ +T +G L+AC +AG V E YF M +++ + P+ DHY C++D+ R G +E
Sbjct: 487 SGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLE 546
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA I++M +P+ VIW +A C+ H N+ LG Y AE+L +++ + Y +L +++
Sbjct: 547 EAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYA 606
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
G+W D V+ L R+E +++ SWI+I + F D HP+ +I +LD L+
Sbjct: 607 ELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFMVKDKSHPRKKQIHSLLDILIA 666
Query: 663 KAK 665
+ +
Sbjct: 667 EMR 669
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 213/441 (48%), Gaps = 53/441 (12%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++ S L C ++ IH+ I K+ D ++ + LV++Y KCGN+ +
Sbjct: 146 EGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVND 205
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VFD + NVVSW SLI+ Y QN A+ VF MLE+ P VTL + ++AC+S
Sbjct: 206 AQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACAS 265
Query: 188 LESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSA----------------- 229
L +I++G+++HA VVK + +D + N+ +Y+ C + A
Sbjct: 266 LSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 230 ----------IKA----FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
KA F ++ E+NV+SW +I +NGE + L F + E + P
Sbjct: 326 MVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA------SNLRVRNSIMYLYLKCGLVDE 329
+T +I C + L +G Q H +K G+ ++ V NS++ +Y+KCG V+E
Sbjct: 386 HYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDL 388
+F M + V+WNAMI G AQ NG G EAL +F ++ SG KPD
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQ------------NGYGNEALELFREMLDSGEKPDH 493
Query: 389 YTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T +L+ C +E+G ++T G T +V++ + G +E A +
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIE 553
Query: 448 EMSTRT-LISWTSMITGFANH 467
EM + + W S++ H
Sbjct: 554 EMPVQPDSVIWGSLLAACKVH 574
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/611 (34%), Positives = 338/611 (55%), Gaps = 14/611 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF+ +L G +Y +++Q C+ SL +++HA IV G FV T L+N
Sbjct: 151 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 210
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G++E++ VF+ + N VSW ++ISG N A +F+ M P T
Sbjct: 211 MYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 270
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF--NR 235
L + A L + +GK++ + E + VG +L +YS CGSL+ A F N
Sbjct: 271 LVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNF 330
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I W +I ++G + + L + +M GI + +T S+ + SL+ G
Sbjct: 331 INCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFG 390
Query: 296 AQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
VH + +K G + V N+I Y KCG +++ +K+FD M ++V+W ++ ++Q
Sbjct: 391 RVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQ 450
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ G EAL+ F + G P+ +TFSS+L C+ L LE G Q+H L
Sbjct: 451 -----------SSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLL 499
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K G ++ + +AL++MY KCG I A +VF ++S ++SWT++I+G+A H L AL
Sbjct: 500 CKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDAL 559
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
QLF M L+G++ N VT + L ACS+ GMV E L YF+ M+ Y + P M+HY C+ID+
Sbjct: 560 QLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDL 619
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R+G +++A +FI+KM EPNE++W + GCR HGN+ELG AA ++L ++P+ +Y
Sbjct: 620 LGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATY 679
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L + ++ G +ED ++N+ +++ + + +SWI +K +V+ F D HPQ EI+
Sbjct: 680 VLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSGDQQHPQKKEIY 739
Query: 655 KVLDELVEKAK 665
L+EL EK K
Sbjct: 740 VKLEELREKIK 750
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/569 (28%), Positives = 278/569 (48%), Gaps = 36/569 (6%)
Query: 22 SSSLATLKDKNHTVSYQRSGSKLI----QLNGNSEPVRSLGFQEALSVLTEGPKVQTSSY 77
S+S L + VS R+GS + Q S+ V E++ + + Q
Sbjct: 8 SASQLPLFELPTAVSNNRTGSLAVSVPSQTAKKSKIVVGRNRPESIGISETYQQTQVQDL 67
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVM-TFLVNVYGKCGNMEEAQKVFDNL 135
+ +L++C + S+ A+ +H ++K+ +D V+ +VY KC A VFD +
Sbjct: 68 IDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM 127
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P+ NV SWT +I G ++ F +ML +G P + +C L+S+ LGK
Sbjct: 128 PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGK 187
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA +V V SL ++Y+ GS+ + FN + E N +SW +I C NG
Sbjct: 188 MVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 247
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
++ F +M + PN +TL S+S G ++ + +G +V + +LG N+ V
Sbjct: 248 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNL---VTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+++ +Y KCG + +A+ +FD + +N WNAMI+G++Q EA
Sbjct: 308 ALIDMYSKCGSLHDARSVFD-TNFINCGVNTPWNAMISGYSQ-----------SGCSQEA 355
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVN 431
L ++ ++ +G+ DLYT+ S+ + +L+ G +H + LK G L V V A+ +
Sbjct: 356 LELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIAD 415
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG +E +VF M R ++SWT+++T ++ SL +AL F M G PNQ T
Sbjct: 416 AYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFT 475
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKI--KPVMDHYMC----LIDMFVRLGCIEEAF 545
F L +C+ +L + E ++ + + K +D C LIDM+ + G I EA
Sbjct: 476 FSSVLISCA-------SLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAG 528
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
K+ P+ V W+ I+G +HG +E
Sbjct: 529 KVFDKIS-NPDIVSWTAIISGYAQHGLVE 556
>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
Length = 617
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/627 (35%), Positives = 348/627 (55%), Gaps = 18/627 (2%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+PR N VSWT+L+SG QN A+ F M AG PT L +A A ++L + G
Sbjct: 1 MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+H V+ + + V ++L +YS CG L+ A + F+++ +K+ ++WT +I +N
Sbjct: 61 AQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKN 120
Query: 255 GEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + F M EG + ++ S+ S G + + +H K G+ + V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180
Query: 314 RNSIMYLYLKCGLVDEAQKLFD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
RN+++ +Y K V+ A ++ N+V+ +MI G+ + + EA
Sbjct: 181 RNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIET-----------DCVEEA 229
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L I+ +L G++P+ +TFSS++ C+ LEQG Q+HA +KT + D VG+ LV+M
Sbjct: 230 LVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDM 289
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG I + ++F E+ RT I+W ++I FA H +A+Q F+ M+ +G+RPN + F
Sbjct: 290 YGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAF 349
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
V L ACS+AG+V E L YF M++ + I+P +HY C+ID + R G ++EA+ FI +M
Sbjct: 350 VSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMP 409
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+PN W + CR G+ ELG AA+ L+KL+P + + L I+ S G+WEDV
Sbjct: 410 IKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKA 469
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V+ L R+ ++ + +SW+ K + F D HPQ +I++ L+EL + K GY
Sbjct: 470 VRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPD 529
Query: 673 ESF-----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
SF E +E YHSE++A+AF L++ P PI+V K+ +C DCH K I
Sbjct: 530 TSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICK 589
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ R+IIVRD+ R H FVNG C+C D+
Sbjct: 590 VERRDIIVRDNSRFHHFVNGRCSCGDY 616
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 187/371 (50%), Gaps = 17/371 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H V+ G + FV + L ++Y KCG + EA +VFD +P+ + V+WT++I GY +N
Sbjct: 63 LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGS 122
Query: 156 PELAIHVFLDMLEAGNYPTNV-TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E A+ F DM G + + L+A L+ L K IH V K E + +V N
Sbjct: 123 LEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRN 182
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREK--NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
+L +Y+ + SA + +I NV+S T++I E + L + ++ +G+
Sbjct: 183 ALIDMYAKSMDVESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGV 241
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+PNEFT +S+ C L GAQ+H+ IK + V ++++ +Y KCGL+ + +
Sbjct: 242 EPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQ 301
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF+ + + + WNA+I AQ H G EA+ F ++ SG++P+ F
Sbjct: 302 LFNEIEYRTDIAWNAVINVFAQ-----------HGHGREAIQAFDRMIYSGIRPNHIAFV 350
Query: 393 SILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+LT CS +++G + +++ G + +++ Y + GR++ A + EM
Sbjct: 351 SLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPI 410
Query: 452 R-TLISWTSMI 461
+ W S++
Sbjct: 411 KPNAYGWCSLL 421
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 98/202 (48%), Gaps = 6/202 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + E G + ++ S+++ C + L +HA ++KT +D FV + L
Sbjct: 227 EEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTL 286
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++YGKCG + + ++F+ + ++W ++I+ + Q+ AI F M+ +G P +
Sbjct: 287 VDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNH 346
Query: 176 VTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ + LTACS + G K ++ + E + + Y G L+ A K +
Sbjct: 347 IAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFIS 406
Query: 235 RIREK-NVMSWTTVIGACGENG 255
+ K N W +++GAC G
Sbjct: 407 EMPIKPNAYGWCSLLGACRMRG 428
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/584 (35%), Positives = 340/584 (58%), Gaps = 22/584 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T L C S +IR G+++H +++K + L LY+ C L A + F+ + +K
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK 154
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I A + G A + L F +ML +PN FT +I + C L G Q+H
Sbjct: 155 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 214
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
S+ IK Y S++ V +S++ +Y K G + +A +F + ++V A+I+G+AQM
Sbjct: 215 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM---G 271
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
D+ EAL +F +L GM + T++S+LT S L AL G+Q+H+ L++G
Sbjct: 272 LDE--------EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQ 323
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
S VV+ +L++MY KCG + A R+F M RT ISW +M+ G++ H ++ + L+LF+
Sbjct: 324 YSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKL 383
Query: 480 MLLAG-VRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMF 535
M V+P+ +T++ L+ CS+ + E +G ++ M+ + I+P + HY C++D+
Sbjct: 384 MREENKVKPDSITYLAVLSGCSHGQL--EDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLL 441
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G +EEAFDFIKKM F P IW + CR H ++E+G ++LL+L+P++ +Y
Sbjct: 442 GRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV 501
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L +++ SAG+WED+ +++L +E+ +++ SW+ + V++F +D HP+ E+ K
Sbjct: 502 ILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAK 561
Query: 656 VLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
+ EL K K GY S L D +E + HSEKLA+AFGL+ TP + I V+K
Sbjct: 562 KVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIK 621
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+F K ++ L AR +I+RD R H V G C+C D+
Sbjct: 622 NLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDY 665
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 210/404 (51%), Gaps = 15/404 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G +V+ Y ++L ECV+++++ + +H H++KT ++ T L+ +Y KC + +A
Sbjct: 85 GREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 144
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+++FD +P+ NVVSWT++IS Y Q A+++F++ML + P + T T LT+C
Sbjct: 145 REMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 204
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
G+QIH+ +K E VG+SL +Y+ G + A F+ + E++V++ T +I
Sbjct: 205 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 264
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G + L+ F ++ EG+ N T S+ + + +L G QVHS ++ G
Sbjct: 265 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 324
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + + NS++ +Y KCG V A+++FD M ++WNAM+ G+ S H
Sbjct: 325 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGY-----------SKHGM 373
Query: 369 GTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQI--HALTLKTGFLSDVVV 425
E L +F + +KPD T+ ++L+ CS + G +I + + K G D+
Sbjct: 374 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 433
Query: 426 GTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHS 468
+V++ + GR+E A +M T W S++ HS
Sbjct: 434 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHS 477
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ +IL C A+ +G+++H +KT +L V + T L+ +Y KC + A +F EM
Sbjct: 93 YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+ ++SWT+MI+ ++ + +AL LF +ML + PN TF L +C Y +LG
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC------YGSLG 206
Query: 511 YFEMMQ-KEYKIKPVMDHYM----CLIDMFVRLGCIEEA 544
+ Q IK + +M L+DM+ + G I +A
Sbjct: 207 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDA 245
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + EG + +Y S+L +L++ + +H+H++++G + ++ L
Sbjct: 274 EEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSL 333
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PT 174
+++Y KCGN+ A+++FD++P +SW +++ GY ++ + +F M E P
Sbjct: 334 IDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPD 393
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
++T L+ CS + +G +I +V + + +G+ C + G +AF+
Sbjct: 394 SITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGC-VVDLLGRAGRVEEAFD 452
Query: 235 RIREKNVMS----WTTVIGACGENGEAVQGLRFFSKML 268
I++ + W +++G+C + + G+ K+L
Sbjct: 453 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL 490
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 238/747 (31%), Positives = 389/747 (52%), Gaps = 36/747 (4%)
Query: 30 DKNHTVSYQRSGSKLIQLNG----NSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQEC 84
D V +G L+ N ++P R L F++ L L ++ V++L C
Sbjct: 116 DDAEKVFEGMAGRNLVSWNALMAAVADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMC 175
Query: 85 VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR---INVV 141
+H VK+G V LV++Y KCG M +A+ F P NVV
Sbjct: 176 AALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVV 235
Query: 142 SWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTN-VTLGTALTACSSLESIRLGKQIHA 199
SW ++ GY +N + A + +M +E P + +T+ + L CS L + +++HA
Sbjct: 236 SWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHA 295
Query: 200 YVVK---YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+VV+ + T D V N+L + Y CG L A + F+ I K V SW +IGA +NGE
Sbjct: 296 FVVRRGLHLTGD--MVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGE 353
Query: 257 AVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
A + F +M + G +P+ F++ S+ CG + L G H ++ G + +R
Sbjct: 354 ASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRV 413
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
S++ +Y++CG A+ LFD + + V+WN MIAG++Q NG E+L
Sbjct: 414 SLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQ------------NGLPGESLQ 461
Query: 375 IFSKLNS--SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+F ++ S G P L +S L CS L A+ G+++H LK D + +++++M
Sbjct: 462 LFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDM 521
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG ++ A F + + +SWT MITG+A + +A+ L++ M G+ P+ T+
Sbjct: 522 YSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTY 581
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+G L AC +AGM+ + L +F+ M+ KI+ ++HY C+I M R G +A ++ M
Sbjct: 582 LGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMP 641
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
EP+ I S ++ C HG +ELG A++LL+L+P E Y + +++ + +W+++
Sbjct: 642 EEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRK 701
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
V+ + R+ +++ SWI I KVYSF + P+ ++ K+ L EK + GY
Sbjct: 702 VRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLPEMHKVRKMWYSLEEKIRAAGYAPD 761
Query: 673 ESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
+ L ++ A +HSEK AIAFGLL T + + V K+ MC+DCHN K+I+
Sbjct: 762 TTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTAGPTKVRVFKNIRMCKDCHNAAKLISK 821
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI+VRD KR H F +G C+C D+
Sbjct: 822 VADREIVVRDKKRFHHFRDGLCSCGDY 848
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 258/532 (48%), Gaps = 38/532 (7%)
Query: 96 IHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+HA K G + D FV LV++YG+CG +++A+KVF+ + N+VSW +L++ +
Sbjct: 85 VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAV---A 141
Query: 155 QPELAIHVFLDMLE---AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
P + +F D LE P TL T L C++L G+ +H VK +
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPR 201
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIRE---KNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V N L +Y+ CG + A AF +NV+SW ++G NGEA +M
Sbjct: 202 VSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQ 261
Query: 269 SE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCG 325
E G+ +E T+ S+ VC + L ++H+ ++ G + + V N+++ Y +CG
Sbjct: 262 MEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCG 321
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL-NSSG 383
+ A ++FDG+ + +WNA+I HAQ NG + A+ +F ++ N+ G
Sbjct: 322 CLLHACRVFDGICSKMVSSWNALIGAHAQ------------NGEASAAIELFREMTNACG 369
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
KPD ++ S+L C L L G+ H L+ G D + +L+++Y +CGR A
Sbjct: 370 QKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLAR 429
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML--LAGVRPNQVTFVGALAACSN 501
+F + + +SW +MI G++ + L ++LQLF +M G P+ + AL ACS
Sbjct: 430 VLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSE 489
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
V LG EM K D ++ +IDM+ + G +++A F ++ + + V
Sbjct: 490 LPAVR--LGK-EMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAK-DAVS 545
Query: 560 WSVFIAG--CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
W+V I G G +G Y ++P D +Y LL AG ED
Sbjct: 546 WTVMITGYAVNGRGKEAVGLYDKMGREGMEP-DGFTYLGLLMACGHAGMLED 596
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 208/442 (47%), Gaps = 33/442 (7%)
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEA--GNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
W L++ + + A+ + +L A G P TL AL +C + G+Q+HA
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQVHAV 88
Query: 201 VVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
K D D VGNSL S+Y CG ++ A K F + +N++SW ++ A + ++
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRGLE 148
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
R + L P+E TL ++ +C + G VH L +K G+ + RV N ++
Sbjct: 149 LFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVD 208
Query: 320 LYLKCGLVDEAQKLF---DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+Y KCG + +A+ F + N+V+WN M+ G+A+ + G L
Sbjct: 209 MYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYAR---------NGEAGAAFGLLRE 259
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKK 435
++ G+ D T S+L +CS L L + ++HA ++ G L+ +V AL+ Y +
Sbjct: 260 MQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGR 319
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQVTFVG 494
CG + A RVF + ++ + SW ++I A + + A++LF +M A G +P+ +
Sbjct: 320 CGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGS 379
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-----FDFIK 549
L AC N + + + K D ++ + + V + C E+ FD ++
Sbjct: 380 LLLACGNLKHLLHGKAAHGFILRNGLEK---DSFIRVSLLSVYIQCGRESLARVLFDAVE 436
Query: 550 KMDFEPNEVIWSVFIAGCRRHG 571
+ D EV W+ IAG ++G
Sbjct: 437 EKD----EVSWNTMIAGYSQNG 454
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/565 (34%), Positives = 329/565 (58%), Gaps = 11/565 (1%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H VK G FV + L+++Y K G + + KVFD +P N V+WT++I+G V+
Sbjct: 138 LHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E + F M + + AL A + ++ G+ IH +K ++++ V NS
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L ++Y+ CG L+ + F ++R +V+SWTT++ A + G+ GL+ F +M + + PN
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E+T +++ S C L+ G Q+H+ + +G+ + L V NSIM LY KCG + K+F
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M +++TW+ +IA ++Q+ G EA S++ S G KP+ + +S+L
Sbjct: 378 SMKFRDIITWSTIIAAYSQV-----------GYGEEAFEYLSRMRSEGPKPNEFALASVL 426
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
++C + LEQG+Q+HA L G +V +AL+ MY KCG I AS++F++ +I
Sbjct: 427 SVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDII 486
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWT+MI+G+A H S +A++LFE++ G+RP+ VTF+G L ACS+AGMV YF M
Sbjct: 487 SWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSM 546
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
K+Y I P +HY C+ID+ R G + +A I+ M + ++V+WS + CR HG+++
Sbjct: 547 SKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDC 606
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G AA ++LKL P ++ L +IF + G+W++ A ++ L + + + + WS +++KD
Sbjct: 607 GQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKD 666
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDEL 660
V++F D HPQ +I+ +L+EL
Sbjct: 667 SVFAFVSGDRSHPQGEDIYNILEEL 691
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/599 (25%), Positives = 262/599 (43%), Gaps = 72/599 (12%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLG 179
K ++++A+ +FD LP+ + VSWT++ISGYV +S A+ +F M L++ L
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
L C + G +H + VK + VG++L +Y G + + K F+ + +
Sbjct: 121 LGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTR 180
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
N ++WT VI G + GL +FS M ++ + + +L G +H
Sbjct: 181 NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIH 240
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ +K G+ N V NS+ +Y KCG +D F M +++V+W ++ + QM
Sbjct: 241 TQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQM---G 297
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
K+D L F ++ +S + P+ YTFS++++ C+ L+ GEQ+HA L GF
Sbjct: 298 KEDC--------GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGF 349
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
++ + V +++ +Y KCG + S+VF M R +I+W+++I ++ +A +
Sbjct: 350 VNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSR 409
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVR 537
M G +PN+ L+ C + ++ + ++ + +C LI M+ +
Sbjct: 410 MRSEGPKPNEFALASVLSVCGSMAILEQGK---QLHAHVLSVGLEQTSMVCSALIIMYAK 466
Query: 538 LGCIEEA----------------------------------FDFIKKMDFEPNEVIWSVF 563
G I EA F+ I+K+ P+ V +
Sbjct: 467 CGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGV 526
Query: 564 IAGCRRHGNMELGFYAAEQLLK---LKPKDCESYAMLLDIFVSAGR-------------- 606
+ C G ++LGFY + K + P E Y ++D+ AGR
Sbjct: 527 LTACSHAGMVDLGFYYFNSMSKDYHITPSK-EHYGCMIDLLCRAGRLHDAETLIRSMPIQ 585
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN-DGLHPQSAEIFKVLDELVEKA 664
W+DV V L R ++ D R +V PN G H A IF + E A
Sbjct: 586 WDDV-VWSTLLRACRIHGDVDCGQ-RAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAA 642
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/332 (30%), Positives = 179/332 (53%), Gaps = 11/332 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y L+ + +L++ IH +K G ++ FV L +Y KCG ++ F +
Sbjct: 219 AYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKM 278
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
++VVSWT++++ Y+Q + + + F M + P T ++ C++ ++ G+
Sbjct: 279 RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGE 338
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HA+V+ + SV NS+ +LYS CG L S K F ++ +++++W+T+I A + G
Sbjct: 339 QLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVG 398
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + S+M SEG +PNEF L S+ SVCG+M L G Q+H+ + +G V +
Sbjct: 399 YGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCS 458
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG + EA K+F ++++W AMI+G+A+ H EA+ +
Sbjct: 459 ALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE-----------HGHSQEAIEL 507
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
F + G++PD TF +LT CS ++ G
Sbjct: 508 FENIQKVGLRPDSVTFIGVLTACSHAGMVDLG 539
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 187/409 (45%), Gaps = 49/409 (11%)
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ + D + N+ + L A F+++ +++ +SWT +I + ++ + LR
Sbjct: 43 FSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRL 102
Query: 264 FSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
FSKM L ++ + F L+ CG L+ G +H +K G +++ V ++++ +Y+
Sbjct: 103 FSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYM 162
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNS 381
K G + + K+FD M N VTW A+I G + G +EA L+ FS +
Sbjct: 163 KIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRA------------GYSEAGLAYFSGMGR 210
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
S ++ D Y ++ L + AL G IH TLK GF + V +L MY KCG+++
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDY 270
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
F +M T ++SWT+++T + LQ F+ M + V PN+ TF ++ C+N
Sbjct: 271 GLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCAN 330
Query: 502 ----------------AGMV------------YEALGYFEMMQKEY---KIKPVMDHYMC 530
G V Y G + K + K + ++ +
Sbjct: 331 FARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIIT-WST 389
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELG 576
+I + ++G EEAF+++ +M E PNE + ++ C +E G
Sbjct: 390 IIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQG 438
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 110/213 (51%), Gaps = 8/213 (3%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EGPK + S+L C + L + +HAH++ G Q V + L+ +Y KCG++
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIA 471
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
EA K+F + + +++SWT++ISGY ++ + AI +F ++ + G P +VT LTACS
Sbjct: 472 EASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACS 531
Query: 187 SLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSA---IKAFNRIREKNVM 242
+ LG + K Y + L G L+ A I++ I+ +V+
Sbjct: 532 HAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSM-PIQWDDVV 590
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
W+T++ AC +G+ G R +++L + PN
Sbjct: 591 -WSTLLRACRIHGDVDCGQRAAAEVLK--LDPN 620
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/696 (32%), Positives = 372/696 (53%), Gaps = 14/696 (2%)
Query: 72 VQTSSY--VSLLQECVN---RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
V+ SS+ VS+ C N + L + +HA+ ++ G F + T LV +YGK G +
Sbjct: 191 VEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINT-LVAMYGKMGKLA 249
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++ + + ++V+W +++S QN Q A+ +M+ G P T+ + L ACS
Sbjct: 250 SSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
LE +R GK++HAY +K + D+ S VG++L +Y C + S + F+ + ++ + W
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWN 369
Query: 246 TVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +N + L F +M S G+ N T+ + C + +H +K
Sbjct: 370 AMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVK 429
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V+N++M +Y + G +D A+++F M +LVTWN +I G+ L
Sbjct: 430 RGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLM 489
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H + + +KP+ T +IL C+ L AL +G++IHA +K +DV
Sbjct: 490 LHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 549
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ALV+MY KCG ++ + +VF ++ R +I+W ++ + H S A+ + M++ G
Sbjct: 550 VGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQG 609
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+PN+VTF+ AACS++GMV E L F M+K+Y ++P DHY C++D+ R G ++EA
Sbjct: 610 VKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEA 669
Query: 545 FDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
+ I + ++ WS + CR H N+E+G AA+ L++L+P Y +L +I+ S
Sbjct: 670 YQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 729
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG W V+ + + + + SWI D+V+ F D HPQS ++ L+ L E+
Sbjct: 730 AGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWER 789
Query: 664 AKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY S E ++E HSEKLAIAFG+LNT + I V K+ +C DC
Sbjct: 790 MRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 849
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K I+ + REII+RD +R H F NG C+C D+
Sbjct: 850 HLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDY 885
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/620 (26%), Positives = 297/620 (47%), Gaps = 70/620 (11%)
Query: 54 VRSLGFQEA----LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD- 108
VRS +EA + ++ G K ++ +LL+ + + + + IHAH+ K G D
Sbjct: 69 VRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDS 128
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V LVN+Y KCG+ KVFD + N VSW SLIS + E+A+ F ML+
Sbjct: 129 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 188
Query: 169 AGNYPTNVTLGTALTACSSL---ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
P++ TL + ACS+ E + +GKQ+HAY ++ + E ++ + N+L ++Y G
Sbjct: 189 EDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAMYGKMGK 247
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L S+ +++++W TV+ + +N + ++ L + +M+ EG++P+ FT++S+
Sbjct: 248 LASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPA 307
Query: 286 CGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + LR G ++H+ +K G N V ++++ +Y C V ++FDGM +
Sbjct: 308 CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGL 367
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVA 403
WNAMI G+AQ + EAL +F ++ S+G+ + T + ++ C R A
Sbjct: 368 WNAMITGYAQ-----------NEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+ E IH +K G D V AL++MY + G+I+ A R+F +M R L++W ++ITG
Sbjct: 417 FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITG 476
Query: 464 FANHSLSHQALQLFEDMLL-----------AGVRPNQVTFVGALAACSNAGMV------- 505
+ AL + M + ++PN +T + L +C+ +
Sbjct: 477 YVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIH 536
Query: 506 ---------------------YEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVRLGCIE 542
Y G +M +K + P+ + + ++ + G +
Sbjct: 537 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQ 596
Query: 543 EAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAM 596
+A D ++ M +PNEV + A C G + G FY ++ ++P + YA
Sbjct: 597 DAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSS-DHYAC 655
Query: 597 LLDIFVSAGRWEDVAVVKNL 616
++D+ AGR ++ + NL
Sbjct: 656 VVDLLGRAGRVKEAYQLINL 675
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 221/432 (51%), Gaps = 24/432 (5%)
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
W L+ V+++ A+ ++DM+ G P N L A + L+ + LGKQIHA+V
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 203 KYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
K+ D +V N+L +LY CG + K F+RI E+N +SW ++I + + L
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTML---SLRVGAQVHSLGIKLGYASNLRVRNSIM 318
F ML E ++P+ FTL S++ C L +G QVH+ G++ G ++ + N+++
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSF-IINTLV 239
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K G + ++ L +LVTWN +++ Q EAL +
Sbjct: 240 AMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQF-----------LEALEYLRE 288
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCG 437
+ G++PD +T SS+L CS L L G+++HA LK G L + VG+ALV+MY C
Sbjct: 289 MVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK 348
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGAL 496
++ RVF M R + W +MITG+A + +AL LF +M AG+ N T G +
Sbjct: 349 QVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVV 408
Query: 497 AACSNAGMV--YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
AC +G EA+ F + + + + V + L+DM+ RLG I+ A KM+ +
Sbjct: 409 PACVRSGAFSKKEAIHGFVVKRGLDRDRFVQN---ALMDMYSRLGKIDIAKRIFGKME-D 464
Query: 555 PNEVIWSVFIAG 566
+ V W+ I G
Sbjct: 465 RDLVTWNTIITG 476
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/603 (33%), Positives = 343/603 (56%), Gaps = 15/603 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K +Y S+L+ C + +++H H++K+G D VM+ V +Y KC E+A K
Sbjct: 295 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIK 354
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P +V SW ++IS Y Q+ QPE A+ +F +M +G P +VTL T +++C+ L
Sbjct: 355 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK+IH +V+ D V ++L +Y CG L A + F +I+ KNV+SW ++I
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 474
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G++ + F +M EGI+P TL+SI C ++L++G +H I+ ++
Sbjct: 475 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 534
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +S++ LY KCG + A+ +F M N+V+WN MI+G+ ++
Sbjct: 535 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKV-----------GSYL 583
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL IF+ + +G+KPD TF+S+L CS+L LE+G++IH +++ + VV AL+
Sbjct: 584 EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL 643
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG ++ A +F ++ R +SWTSMI + +H + +AL+LFE M + +P++V
Sbjct: 644 DMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKV 703
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+ L+ACS+AG+V E YF M EY KP ++HY CLID+ R+G + EA++ +++
Sbjct: 704 TFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 763
Query: 551 M-DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
D + + S + C H ++LG L++ P D +Y +L +++ S +W++
Sbjct: 764 TPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDE 823
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK---VLDELVEKAKC 666
V V+ +E L + SWI + +++ F D HPQ+ I++ +L VEK +
Sbjct: 824 VRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQV 883
Query: 667 FGY 669
+
Sbjct: 884 LSF 886
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 152/557 (27%), Positives = 272/557 (48%), Gaps = 54/557 (9%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR-INVVSWTSLISGYV 151
++IH IV G + + L+N+Y C + A+ VF + +++ W L++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 152 QNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
+N + VF +L P T + L ACS L + GK +H +V+K D
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDV 333
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
V +S +Y+ C AIK F+ + E++V SW VI ++G+ + L F +M
Sbjct: 334 VVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G +P+ TLT++ S C +L L G ++H ++ G+A + V ++++ +Y KCG ++ A
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+++F+ + N+V+WN+MIAG+ S + +F +++ G++P L T
Sbjct: 454 KEVFEQIQRKNVVSWNSMIAGY-----------SLKGDSKSCIELFRRMDEEGIRPTLTT 502
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
SSIL CSR V L+ G+ IH ++ +D+ V ++L+++Y KCG I A VF M
Sbjct: 503 LSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP 562
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
++SW MI+G+ +AL +F DM AGV+P+ +TF L ACS ++ +
Sbjct: 563 KTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKE 622
Query: 511 YFE-MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA------------------------- 544
+++ + +I V+ L+DM+ + G ++EA
Sbjct: 623 IHNFIIESKLEINEVV--MGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSH 680
Query: 545 ---------FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK---LKPKDCE 592
F+ +++ D +P++V + ++ C G ++ G Y Q++ KP E
Sbjct: 681 GQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA-VE 739
Query: 593 SYAMLLDIFVSAGRWED 609
Y+ L+D+ GR +
Sbjct: 740 HYSCLIDLLGRVGRLRE 756
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 209/398 (52%), Gaps = 14/398 (3%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+ +P ++L E + V G K + + +++ C L + IH +V++G D
Sbjct: 377 DGQPEKALELFEEMKV--SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDG 434
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV + LV++YGKCG +E A++VF+ + R NVVSW S+I+GY + I +F M E
Sbjct: 435 FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 494
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G PT TL + L ACS +++LGK IH Y+++ + E D V +SL LY CG++ SA
Sbjct: 495 GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSA 554
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F + + NV+SW +I + G ++ L F+ M G++P+ T TS+ C +
Sbjct: 555 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 614
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G ++H+ I+ N V +++ +Y KCG VDEA +F+ + + V+W +MI
Sbjct: 615 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 674
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-E 408
A + +H EAL +F K+ S KPD TF +IL+ CS +++G
Sbjct: 675 AAYG-----------SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCY 723
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ + + GF V + L+++ + GR+ A +
Sbjct: 724 YFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEIL 761
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 215/398 (54%), Gaps = 26/398 (6%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-N 240
+TA S+LE + LGK IH +V +++ ++ SL +LY +C SA F I +
Sbjct: 203 VTAGSALEEL-LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLD 261
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ W ++ AC +N ++GL F ++L ++P+ FT S+ C + + G VH
Sbjct: 262 ITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVH 321
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK G+A ++ V +S + +Y KC + ++A KLFD M ++ +WN +I+ + Q
Sbjct: 322 THVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQ----- 376
Query: 360 KDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+G E AL +F ++ SG KPD T +++++ C+RL+ LE+G++IH +++G
Sbjct: 377 -------DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSG 429
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F D V +ALV+MY KCG +E A VF ++ + ++SW SMI G++ S ++LF
Sbjct: 430 FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFR 489
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDM 534
M G+RP T L ACS + V LG F Y I+ ++ + LID+
Sbjct: 490 RMDEEGIRPTLTTLSSILMACSRS--VNLQLGKF---IHGYIIRNRVEADIFVNSSLIDL 544
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ + G I A + + M + N V W+V I+G + G+
Sbjct: 545 YFKCGNIGSAENVFQNMP-KTNVVSWNVMISGYVKVGS 581
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/685 (32%), Positives = 368/685 (53%), Gaps = 35/685 (5%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L+ C IH H + G D FV T L+++Y KC + +A +F +P ++
Sbjct: 17 LKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDL 76
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNY--PTNVTLGTALTACSSLESIRLGKQIH 198
V+W ++++GY + A+ L M + P TL L + ++ G +H
Sbjct: 77 VAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVH 136
Query: 199 AYVV----------KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
AY + K + D +G +L +Y+ CGSL A + F+ + +N ++W+ +I
Sbjct: 137 AYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALI 196
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV---CGTMLSLRVGAQVHSLGIKL 305
G Q F ML++G+ + TSI+S C ++ LR+G Q+H+L K
Sbjct: 197 GGFVLCSRMTQAFLLFKAMLAQGL--CFLSPTSIASALRACASLDHLRMGEQLHALLAKS 254
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G ++L NS++ +Y K GL+D+A LFD M+ + V+++A+++G+ Q
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQ----------- 303
Query: 366 HNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
NG EA +F K+ + ++PD T S++ CS L AL+ G H + G S+
Sbjct: 304 -NGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETS 362
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ AL++MY KCGRI+ + +VF M +R ++SW +MI G+ H L +A LF +M G
Sbjct: 363 ICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLG 422
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
P+ VTF+ L+ACS++G+V E +F +M Y + P M+HY+C++D+ R G ++EA
Sbjct: 423 FPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEA 482
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
++FI+ M + +W + CR + N++LG + + +L P+ ++ +L +I+ +A
Sbjct: 483 YEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAA 542
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
GR+++ A V+ + + + ++ SWI I +++F D HPQS EI++ LD ++
Sbjct: 543 GRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGI 602
Query: 665 KCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
K GY+ SF L D +E A + HSEKLAIA+G+L+ I V K+ +C DCH
Sbjct: 603 KKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCH 662
Query: 720 NFIKIITSLTAREIIVRDSKRLHKF 744
IK I+ + R IIVRD+ R H F
Sbjct: 663 TVIKHISLVKRRAIIVRDANRFHHF 687
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 212/462 (45%), Gaps = 57/462 (12%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
ML P N T AL ACS+L G+ IH + + + D V +L +Y C
Sbjct: 1 MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENG---EAVQGLRFFSKMLSEGIQPNEFTLTSI 282
L A F + +++++W ++ +G AV L +M ++PN TL ++
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHL-LSMQMQMHRLRPNASTLVAL 119
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS-------------IMYLYLKCGLVDE 329
+ +L G VH+ I+ N RNS ++ +Y KCG +
Sbjct: 120 LPLLAQQGALAQGTSVHAYCIRACLHPN---RNSKSKLTDGVLLGTALLDMYAKCGSLLY 176
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG---MKP 386
A+++FD M N VTW+A+I G + T+A +F + + G + P
Sbjct: 177 ARRVFDAMPARNEVTWSALIGGFVLCSRM-----------TQAFLLFKAMLAQGLCFLSP 225
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ +S L C+ L L GEQ+HAL K+G +D+ G +L++MY K G I++A +F
Sbjct: 226 T--SIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALF 283
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
EM+ + +S++++++G+ + + +A +F+ M V P+ T V + ACS+
Sbjct: 284 DEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSH----L 339
Query: 507 EALGYFEMMQKEYKIKPVM-DHYMC--LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIW 560
AL + I+ + + +C LIDM+ + G I+ + F+ + D V W
Sbjct: 340 AALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDI----VSW 395
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLK----PKDCESYAMLL 598
+ IAG HG LG A L++ P D ++ LL
Sbjct: 396 NTMIAGYGIHG---LGKEATALFLEMNNLGFPPDGVTFICLL 434
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 2/282 (0%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S S L+ C + L E +HA + K+G H D L+++Y K G +++A +
Sbjct: 223 LSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIAL 282
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + VS+++L+SGYVQN + E A VF M P T+ + + ACS L ++
Sbjct: 283 FDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAAL 342
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ G+ H V+ +TS+ N+L +Y+ CG ++ + + FN + ++++SW T+I
Sbjct: 343 QHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGY 402
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLGYASN 310
G +G + F +M + G P+ T + S C + L + H +G G
Sbjct: 403 GIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPR 462
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ ++ L + G +DEA + M ++ W A++
Sbjct: 463 MEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGA 504
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/786 (28%), Positives = 385/786 (48%), Gaps = 99/786 (12%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + Y L+ C + IH ++K G D ++ L+N YG+C +E+
Sbjct: 127 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 186
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +VF +P + W I +Q+ + + + +F M + T+ L AC
Sbjct: 187 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 246
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ ++ KQIH YV ++ + D S+ N L S+YS G L A + F+ + +N SW ++
Sbjct: 247 MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSM 306
Query: 248 IGA------------------------------CGENGEAVQG-----LRFFSKMLSEGI 272
I + C +G + G L +M EG
Sbjct: 307 ISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGF 366
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+PN ++TS+ + L +G + H ++ G+ ++ V S++ +Y+K + AQ
Sbjct: 367 KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQA 426
Query: 333 LFDGMSHVNLVTWNAMIAGHA-------------QM-MDLAKDDLSAHNG---------- 368
+FD M + N+ WN++++G++ QM + K DL NG
Sbjct: 427 VFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGC 486
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSI---------------------------------- 394
G EAL++ + S G+ P++ +++++
Sbjct: 487 GKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITC 546
Query: 395 -LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
L C+ L L++G++IH L+++ GF+ DV V TAL++MY K ++ A +VF + +T
Sbjct: 547 LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT 606
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L SW MI GFA L +A+ +F +M GV P+ +TF L+AC N+G++ E YF+
Sbjct: 607 LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFD 666
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M +Y+I P ++HY C++D+ R G ++EA+D I M +P+ IW + CR H N+
Sbjct: 667 SMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNL 726
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+ AA+ L KL+P + +Y ++++++ RWED+ ++ L + WSWI+I
Sbjct: 727 KFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQI 786
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHS 688
+V+ F ++ HP + +I+ L +LV + K GY ++ + +++ + H+
Sbjct: 787 NQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHT 846
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLAI +GL+ PI V+K+T +C DCH+ K I+ + ARE+ +RD R H F G
Sbjct: 847 EKLAITYGLIKMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGK 906
Query: 749 CTCRDF 754
C+C DF
Sbjct: 907 CSCNDF 912
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 229/509 (44%), Gaps = 32/509 (6%)
Query: 89 SLSNAEIIHAHIVKTGSHQDF-FVMTFLVNVYGKCGNMEEAQKVFD-NLPRINVVSWTSL 146
SL++ +++HA ++K + L++ Y G+ A VF LPR N + W S
Sbjct: 45 SLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVGLPR-NYLKWNSF 103
Query: 147 ISGYVQNSQP-ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+ + ++ + + VF ++ G + AL C+ + I LG +IH ++K
Sbjct: 104 VEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRG 163
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D + +L + Y C L A + F+ + + W I ++ + +G+ F
Sbjct: 164 FDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFR 223
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
KM ++ T+ + CG M +L Q+H + G S++ + N ++ +Y K G
Sbjct: 224 KMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNG 283
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQM----------MDLAKDDLSA---------- 365
++ A+++FD M + N +WN+MI+ +A + +L D+
Sbjct: 284 KLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 343
Query: 366 ----HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
H E L+I ++ G KP+ + +S+L S L L G++ H L+ GF
Sbjct: 344 GHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDC 403
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DV VGT+L++MY K + A VF M R + +W S+++G++ + AL+L M
Sbjct: 404 DVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQME 463
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G++P+ VT+ G ++ + G EAL K + P + + LI + G
Sbjct: 464 KEGIKPDLVTWNGMISGYAMWGCGKEALAVLH-QTKSLGLTPNVVSWTALISGSSQAGNN 522
Query: 542 EEAFDFIKKMDFE---PNEVIWSVFIAGC 567
++ F +M E PN + + C
Sbjct: 523 RDSLKFFAQMQQEGVMPNSASITCLLRAC 551
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/636 (34%), Positives = 355/636 (55%), Gaps = 29/636 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + +V SW S+I+ ++ A+ F M + YPT + A+ ACSSL I G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 195 KQIH--AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQ H A+V YQ+ D V ++L +YSTCG L A K F+ I ++N++SWT++I
Sbjct: 96 KQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 253 ENGEAVQGLRFFSKML------SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
NG A+ + F +L + + + L S+ S C + + + +HS IK G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 307 YASNLRVRNSIMYLYLKCGL--VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+ + V N+++ Y K G V A+K+FD + + V++N++++ +AQ
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ---------- 263
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA +F +L + + + T S++L S AL G+ IH ++ G DV
Sbjct: 264 -SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+VGT++++MY KCGR+E A + F M + + SWT+MI G+ H + +AL+LF M+ +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GVRPN +TFV LAACS+AG+ E +F M+ + ++P ++HY C++D+ R G +++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+D I++M +P+ +IWS +A CR H N+EL + +L +L +C Y +L I+
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AGRW+DV V+ + + L + +S + + +V+ F D HPQ +I++ L EL K
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 664 AKCFGYKQQES--FELTDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY S DEE + HSEKLAIAFG++NT S + VVK+ +C DC
Sbjct: 563 LLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
HN IK+I+ + RE +VRD+KR H F +G C+C D+
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDY 658
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 229/469 (48%), Gaps = 31/469 (6%)
Query: 14 LETKSRQPSSSLATL----KDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEG 69
L T+ +L TL DK S+ + L + ++E + + LS+
Sbjct: 17 LHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP-- 74
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
SS+ ++ C + + + + H G D FV + L+ +Y CG +E+A+
Sbjct: 75 ---TRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN------YPTNVTLGTALT 183
KVFD +P+ N+VSWTS+I GY N A+ +F D+L N + ++ L + ++
Sbjct: 132 KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVIS 191
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI--KAFNRIREKNV 241
ACS + + L + IH++V+K + SVGN+L Y+ G A+ K F++I +K+
Sbjct: 192 ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHS 300
+S+ +++ ++G + + F +++ + N TL+++ +LR+G +H
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
I++G ++ V SI+ +Y KCG V+ A+K FD M + N+ +W AMIAG+
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM------ 365
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL-VALEQGEQIHALTLKTGF 419
H +AL +F + SG++P+ TF S+L CS + +E +A+ + G
Sbjct: 366 -----HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV 420
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ +V++ + G +++A + M + I W+S++ H
Sbjct: 421 EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 42/372 (11%)
Query: 233 FNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FNR +K +V SW +VI +G++ + L FS M + P + C ++
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G Q H GY S++ V ++++ +Y CG +++A+K+FD + N+V+W +MI G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKL------NSSGMKPDLYTFSSILTICSRLVALE 405
+ DL+ + +A+S+F L + M D S+++ CSR+ A
Sbjct: 152 Y---------DLNGN--ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR--IERASRVFVEMSTRTLISWTSMITG 463
E IH+ +K GF V VG L++ Y K G + A ++F ++ + +S+ S+++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 464 FANHSLSHQALQLFEDMLLAGVRP-NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A +S++A ++F ++ V N +T L A S++G AL + + +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG----ALRIGKCIHDQVIRM 316
Query: 523 PVMDHYMC---LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ D + +IDM+ + G +E +AFD +K + W+ IAG HG+
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGMHGH---- 368
Query: 577 FYAAEQLLKLKP 588
A + L+L P
Sbjct: 369 ---AAKALELFP 377
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/749 (31%), Positives = 388/749 (51%), Gaps = 71/749 (9%)
Query: 65 VLTEGPKVQTSSYVSL-LQEC-VNRKSLSNAE----IIHAHIVKTGSHQDFFVMTFLVNV 118
+L G V + Y L LQ C + ++SN +HA VK GS Q +L+ +
Sbjct: 274 LLFLGFSVSSYFYPPLWLQSCSLFHSTISNGPPPLGTLHALSVKNGSLQTLNSANYLLTL 333
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K NM+ A+K+FD +P+ N +WT LISG+ + E+ +F +M G P TL
Sbjct: 334 YVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTL 393
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ CS +++LGK +HA++++ + D +GNS+ LY C A + F + E
Sbjct: 394 SSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNE 453
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKM----------LSEGIQPNEFTLTSISSV--- 285
+V+SW +I A G+ + L F ++ + +G+ + ++ +
Sbjct: 454 GDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCM 513
Query: 286 --CGTMLSL----------------RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
CGT S+ +G Q+H + +K G+ + +R+S++ +Y KCG +
Sbjct: 514 VECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMYCKCGRM 573
Query: 328 DEAQKLF-----DGMSHVN-----------LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
D A + D + + N +V+W M++G+ NG E
Sbjct: 574 DNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVW------------NGKYE 621
Query: 372 -ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
L F + + D+ T ++I++ C+ LE G +HA K G D VG++L+
Sbjct: 622 DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLI 681
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY K G ++ A +F + + ++ WTSMI+G A H QA+ LFE+ML G+ PN+V
Sbjct: 682 DMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEV 741
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+G L AC +AG++ E YF MM+ Y I P ++H ++D++ R G + E +FI +
Sbjct: 742 TFLGVLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFE 801
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
+W F++ CR H N+E+G + +E LL++ P D +Y +L ++ S RW++
Sbjct: 802 NGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEA 861
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
A V++L + + + SWI++KD++++F D HPQ EI+ LD L+ + K GY
Sbjct: 862 ARVRSLMHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYS 921
Query: 671 QQESFELTD--EESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ D EE V +HSEKLA+ FG++NT +PI ++K+ +C DCHNFIK
Sbjct: 922 FDVKLVMQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYA 981
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ L REII+RD R H F +G C+C D+
Sbjct: 982 SQLLDREIILRDIHRFHHFKHGGCSCGDY 1010
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 328/588 (55%), Gaps = 13/588 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+++ C A +HAH++K+ D L+++Y K M +A VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
+++SW S+I+G+ Q A+ F +ML Y P G+A +ACS L G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+QIH +K+ D G SLC +Y+ CG L SA F I + ++++W +I
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
A + FFS+M G+ PN+ T+ S+ C + L G QVHS +K+G+ ++ V
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC +++A ++F+ + + ++V+WN ++ Q N E L
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQ-----------QNQAGEVL 489
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ + +S +KPD T +++L ++ + E G QIH +K+G D+ V AL+NMY
Sbjct: 490 RLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMY 549
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A ++F + +ISW+S+I G+A +A +LF M GV+PN++TFV
Sbjct: 550 TKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFV 609
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+ GMV E L + MQ++Y+I P +H C++D+ R GC++ A DFIK+M F
Sbjct: 610 GILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPF 669
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P+ V+W +A C+ HGN+E+G AAE +LK+ P + + ML +I S+G W+D A +
Sbjct: 670 VPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARL 729
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
++ R + + SWI IKDKV+ F D LHP+ +I+ +L+EL+
Sbjct: 730 RSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELM 777
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/572 (29%), Positives = 301/572 (52%), Gaps = 50/572 (8%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+++ +Y L+ C + +SL + IH H++ D + ++++YGKCG+++EA+ +
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD++P NVVSWTS+ISGY + + + AI +++ ML +G+ P + T G+ + +CS L+
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+L +Q+HA+V+K + D N+L S+Y+ + AI F+RI K+++SW ++I
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 252 GENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G ++ L F +MLS+ + QPNEF S S C +L G Q+H L IK G S+
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
L S+ +Y KCG ++ A+ +F + +LV WNA+IAG A + +
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV-----------SNAK 384
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
E+ S FS++ +G+ P+ T S+L CS V L G Q+H+ +K GF D+ V +L+
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLL 444
Query: 431 NMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+MY KC + A +VF ++ + ++SW +++T + + + L+L + M + ++P+
Sbjct: 445 SMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDH 504
Query: 490 VTF--------------VGALAAC-------------SNAGM-VYEALGYFEMMQKEYKI 521
VT VG+ C SNA + +Y G E +K +
Sbjct: 505 VTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564
Query: 522 --KPVMDHYMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG 576
P + + LI + + GC +EAF+ + M +PNE+ + + C G +E G
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEG 624
Query: 577 ---FYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++ ++ P E + ++D+ AG
Sbjct: 625 LKLYRTMQEDYRISPTK-EHCSCMVDLLARAG 655
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+++ L K +L H +A IF K +SS +K T++ ++ CS L +LE G +IH
Sbjct: 68 KIISLCKKNL--HREALKAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRH 123
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
L + D+++ +++MY KCG ++ A +F M + ++SWTSMI+G++ + A
Sbjct: 124 MLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNA 183
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLI 532
+ L+ ML +G P+ TF + +CS A + +++ E+ + + LI
Sbjct: 184 ITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQN--ALI 241
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
M+ + + +A + ++ + + + W IAG + G
Sbjct: 242 SMYTKFSQMADAINVFSRIIIK-DLISWGSMIAGFSQLG 279
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/725 (32%), Positives = 375/725 (51%), Gaps = 59/725 (8%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
AL V P+ + SY +++ + S A + + +D F ++ Y +
Sbjct: 65 ALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKM----PERDLFSWNVMLTGYVR 120
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+ EA K+FD +P+ +VVSW +++SGY QN + A VF M + N L
Sbjct: 121 NRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAY 180
Query: 182 LTACSSLESIRLGKQ------------IHAYVVKYQTED-----------DTSVGNSLCS 218
+ E+ RL + + YV + D D N++ S
Sbjct: 181 VHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMIS 240
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
Y+ G L+ A + FN ++V +WT ++ +NG + ++F +M + NE +
Sbjct: 241 GYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVK----NEIS 296
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYA---SNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ ML+ V + + +L A N+ N+++ Y + G + +A+KLFD
Sbjct: 297 YNA-------MLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFD 349
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSI 394
M + V+W A+I+G+AQ NG EAL++F ++ G + TFS
Sbjct: 350 MMPQRDCVSWAAIISGYAQ------------NGHYEEALNMFVEMKRDGESSNRSTFSCA 397
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ C+ + ALE G+Q+H +K GF + VG AL+ MY KCG + A+ VF + + +
Sbjct: 398 LSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDV 457
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SW +MI G+A H QAL LFE M AGV+P+++T VG L+ACS++G++ YF
Sbjct: 458 VSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYS 517
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M ++Y +KP HY C+ID+ R G +EEA + ++ M F+P W + R HGN E
Sbjct: 518 MDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTE 577
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG AAE + K++P++ Y +L +++ ++GRW DV +++ RE + + +SW+ ++
Sbjct: 578 LGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQ 637
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
+K+++F D HP+ I+ L+EL K + GY L D +E YHSE
Sbjct: 638 NKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSE 697
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLA+AFG+L P PI V+K+ +C+DCHN IK I+ + R II+RDS R H F G C
Sbjct: 698 KLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGIC 757
Query: 750 TCRDF 754
+C D+
Sbjct: 758 SCGDY 762
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 174/388 (44%), Gaps = 44/388 (11%)
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
S NS + + ++ ++++W I + NG LR F+ M P +++ +
Sbjct: 30 STNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSM------PRRSSVSYNAM 83
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
+ G + + + + L K+ +L N ++ Y++ + EA KLFD M ++V+
Sbjct: 84 ISGYLRNAKF-SLARDLFDKMP-ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVS 141
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
WNAM++G+AQ NG EA +F+K+ + +++ +L
Sbjct: 142 WNAMLSGYAQ------------NGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGR 185
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L++ ++ ++ +++ L+ Y K + A ++F M R +ISW +MI+G
Sbjct: 186 LKEARRL----FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISG 241
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+A QA +LF + + V T+ ++ GMV EA YF+ M + +I
Sbjct: 242 YAQVGDLSQAKRLFNESPIRDV----FTWTAMVSGYVQNGMVDEARKYFDEMPVKNEIS- 296
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
Y ++ +V+ + A + + M N W+ I G ++G G A +L
Sbjct: 297 ----YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMITGYGQNG----GIAQARKL 347
Query: 584 LKLKP-KDCESYAMLLDIFVSAGRWEDV 610
+ P +DC S+A ++ + G +E+
Sbjct: 348 FDMMPQRDCVSWAAIISGYAQNGHYEEA 375
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 176/413 (42%), Gaps = 61/413 (14%)
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
VK++ + D N S + G +SA++ FN + ++ +S+ +I N +
Sbjct: 39 VKFK-DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLAR 97
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F KM + LT G + + R+G + H L L ++ N+++ Y
Sbjct: 98 DLFDKMPERDLFSWNVMLT------GYVRNRRLG-EAHKL-FDLMPKKDVVSWNAMLSGY 149
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
+ G VDEA+++F+ M H N ++WN ++A + HNG L +L
Sbjct: 150 AQNGFVDEAREVFNKMPHRNSISWNGLLAAY------------VHNG---RLKEARRLFE 194
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
S +L +++ ++ + L Q+ + DV+ +++ Y + G + +
Sbjct: 195 SQSNWELISWNCLMGGYVKRNMLGDARQL----FDRMPVRDVISWNTMISGYAQVGDLSQ 250
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A R+F E R + +WT+M++G+ + + +A + F++M + N++++ LA
Sbjct: 251 AKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPV----KNEISYNAMLAGYVQ 306
Query: 502 ------AGMVYEAL------------------GYFEMMQKEYKIKPVMD--HYMCLIDMF 535
AG ++EA+ G +K + + P D + +I +
Sbjct: 307 YKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGY 366
Query: 536 VRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+ G EEA + +M + N +S ++ C +ELG Q++K
Sbjct: 367 AQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVK 419
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 236/724 (32%), Positives = 378/724 (52%), Gaps = 57/724 (7%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
AL V P + SY +++ + S A + + H+D F ++ Y +
Sbjct: 52 ALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKM----PHKDLFSWNLMLTGYAR 107
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+ +A+ +FD++P +VVSW +++SGYV++ + A VF M + N L
Sbjct: 108 NRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNSISWNGLLAAY 167
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSV--GNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ + E+ RL ++++ D + N L Y L A + F++I +
Sbjct: 168 VRSGRLEEARRL----------FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVR 217
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI--SSVCGTML--SLRVG 295
+++SW T+I ++G+ Q R F E + FT T++ + V ML + RV
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFE----ESPVRDVFTWTAMVYAYVQDGMLDEARRVF 273
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++ ++ Y N ++ Y + +D ++LF+ M N+ +WN MI+G+ Q
Sbjct: 274 DEM-PQKREMSY-------NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQN 325
Query: 356 MDLA-----------KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSIL 395
DLA +D +S A NG EA+++ ++ G + TF L
Sbjct: 326 GDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCAL 385
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ C+ + ALE G+Q+H ++TG+ +VG ALV MY KCG I+ A VF + + ++
Sbjct: 386 SACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIV 445
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW +M+ G+A H QAL +FE M+ AGV+P+++T VG L+ACS+ G+ YF M
Sbjct: 446 SWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSM 505
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
K+Y I P HY C+ID+ R GC+EEA + I+ M FEP+ W + R HGNMEL
Sbjct: 506 NKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMEL 565
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G AAE + K++P + Y +L +++ ++GRW DV+ ++ R+ + +T +SW+ +++
Sbjct: 566 GEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQN 625
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEK 690
K+++F D HP+ I+ L+EL K K GY L D E YHSEK
Sbjct: 626 KIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEK 685
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LA+AFG+L P PI V+K+ +C DCHN IK I+ + R IIVRDS R H F G C+
Sbjct: 686 LAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICS 745
Query: 751 CRDF 754
CRD+
Sbjct: 746 CRDY 749
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/718 (30%), Positives = 386/718 (53%), Gaps = 55/718 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+L++ KS S A+ +HA ++T S + ++++Y + EA +F L
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQS-LSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V++W S+I + S A+ F++M +G P + + L +C+ + +R G+ +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 199 AYVVKYQTEDDTSVGNSLCSLYS---------------------------------TC-- 223
++V+ + D GN+L ++Y+ TC
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 224 -GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
++S + F + K+V+S+ T+I ++G LR +M + ++P+ FTL+S+
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+ + + G ++H I+ G S++ + +S++ +Y K +++++++F + +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
++WN+++AG+ Q NG EAL +F ++ ++ +KP FSS++ C+ L
Sbjct: 309 ISWNSLVAGYVQ------------NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
L G+Q+H L+ GF S++ + +ALV+MY KCG I+ A ++F M+ +SWT++I
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
G A H H+A+ LFE+M GV+PNQV FV L ACS+ G+V EA GYF M K Y +
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
++HY + D+ R G +EEA++FI KM EP +WS ++ C H N+EL AE
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
++ + ++ +Y ++ +++ S GRW+++A ++ R++ L + SWI +K+K + F
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 596
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESAS---VYHSEKLAIAFG 696
D HP +I + L ++E+ + GY S L DEE HSE+LA+AFG
Sbjct: 597 SGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFG 656
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++NT + I V K+ +C DCH IK I+ +T REIIVRD+ R H F G+C+C D+
Sbjct: 657 IINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 4/132 (3%)
Query: 59 FQEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ EAL ++T K ++ S++ C + +L + +H ++++ G + F+ +
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCGN++ A+K+FD + ++ VSWT++I G+ + A+ +F +M G P
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPN 443
Query: 175 NVTLGTALTACS 186
V LTACS
Sbjct: 444 QVAFVAVLTACS 455
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/635 (33%), Positives = 354/635 (55%), Gaps = 20/635 (3%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE-AGNYPTNVTLGTALTACS 186
A VF + ++V++W S++ +V ++ P A+ + +MLE + N P T + L C+
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L ++GK +H VVKY D + +L ++Y+ CG L SA F R+ +N + WT+
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I +N + L + KM +G P+E T+ ++ S C + L VG ++HS ++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ ++++ +Y KCG + A+++FD +S ++ W+A+I G+ + +
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVK-----------N 259
Query: 367 NGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
N TEAL +F ++ S M+P+ T ++++ C++L LE G +H +T V +
Sbjct: 260 NRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSL 319
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+L++M+ KCG I+ A R+F MS + LISW SM+ GFA H L +AL F M +
Sbjct: 320 NNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDL 379
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+P+++TF+G L ACS+AG+V E F ++ Y ++ +HY C++D+ R G + EA
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAR 439
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+FI+ M +P+ IW + CR + N+ELG AA LLKL+P + Y +L +I+
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRK 499
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
W +V V+ L E+ + +T S + I + +SF D HP+ AEI +L ++ EK K
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK 559
Query: 666 CFGYKQQESFELTD------EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
GY S L + EES S HSEKLA+ +GLL + I I+++K+ +C DCH
Sbjct: 560 LAGYVADTSEVLLNIDDNKKEESVS-QHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCH 618
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK+++ + R+I +RD R H F +G C+CRD+
Sbjct: 619 TLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDY 653
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 195/336 (58%), Gaps = 12/336 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ SLL+ C +++H +VK H D ++ T L+N+Y CG+++ A+ +F+ +
Sbjct: 81 TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM 140
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N V WTS+ISGY++N P A+ ++ M E G P VT+ T ++AC+ L+ + +G
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGM 200
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++H+++ + + +G++L ++Y+ CG L +A + F+++ +K+V +W+ +I +N
Sbjct: 201 KLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNN 260
Query: 256 EAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + L+ F ++ ++PNE T+ ++ S C + L G VH + ++ +
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN 320
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS++ ++ KCG +D A+++FD MS+ +L++WN+M+ G A H G EAL+
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFA-----------LHGLGREALA 369
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
F + ++ ++PD TF +LT CS +++G+++
Sbjct: 370 QFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 351/669 (52%), Gaps = 93/669 (13%)
Query: 73 QTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+S + LL C+ K S +HA ++K+G + F+ L++ Y KCG++E+ ++V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 132 FDNLPRINV-------------------------------VSWTSLISGYVQNSQPELAI 160
FD +P+ N+ +W S++SG+ Q+ + E A+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
F M + G + + L+ACS L + G Q+H+ + K D +G++L +Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
S CG++N A + F+ + ++NV+SW ++I +NG AV+ L F ML ++P+E TL
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY------LYLKCGLVDEAQKLF 334
S+ S C ++ +++VG +VH +K N ++RN I+ +Y KC + EA+ +F
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVK-----NDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 335 DG-------------------------------MSHVNLVTWNAMIAGHAQMMDLAKDDL 363
D M+ N+V+WNA+IAG+ Q
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ--------- 363
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-- 420
NG EALS+F L + P Y+F++IL C+ L L G Q H LK GF
Sbjct: 364 ---NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 421 ----SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
D+ VG +L++MY KCG +E VF +M R +SW +MI GFA + ++AL+L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F +ML +G +P+ +T +G L+AC +AG V E YF M +++ + P+ DHY C++D+
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G +EEA I++M +P+ VIW +A C+ H N+ LG Y AE+LL+++P + Y +
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVL 600
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L +++ G+WEDV V+ R+E +++ SWI+I+ + F D HP+ +I +
Sbjct: 601 LSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSL 660
Query: 657 LDELVEKAK 665
LD L+ + +
Sbjct: 661 LDILIAEMR 669
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 213/441 (48%), Gaps = 53/441 (12%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + S+ S+L C ++ +H+ I K+ D ++ + LV++Y KCGN+ +
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VFD + NVVSW SLI+ + QN A+ VF MLE+ P VTL + ++AC+S
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 188 LESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSA----------------- 229
L +I++G+++H VVK + +D + N+ +Y+ C + A
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 230 ----------IKA----FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
KA F ++ E+NV+SW +I +NGE + L F + E + P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA------SNLRVRNSIMYLYLKCGLVDE 329
++ +I C + L +G Q H +K G+ ++ V NS++ +Y+KCG V+E
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDL 388
+F M + V+WNAMI G AQ NG G EAL +F ++ SG KPD
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQ------------NGYGNEALELFREMLESGEKPDH 493
Query: 389 YTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T +L+ C +E+G ++T G T +V++ + G +E A +
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Query: 448 EMSTRT-LISWTSMITGFANH 467
EM + + W S++ H
Sbjct: 554 EMPMQPDSVIWGSLLAACKVH 574
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 327/578 (56%), Gaps = 20/578 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C ++ IR Q+HA+VV T D + N L Y+ +++ A F+ + ++
Sbjct: 10 LLRCRNVFHIR---QVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDS 66
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W+ ++G + G+ F ++L G+ P+ +TL + C L++G +H +
Sbjct: 67 KTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDV 126
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K G S+ V S++ +Y KC +V++AQ+LF+ M +LVTW MI +A
Sbjct: 127 VLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-------- 178
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
D +A+ E+L +F ++ G+ PD +++ C++L A+ + + ++ GF
Sbjct: 179 DCNAY----ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSL 234
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DV++GTA+++MY KCG +E A VF M + +ISW++MI + H A+ LF ML
Sbjct: 235 DVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMML 294
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+ PN+VTFV L ACS+AG++ E L +F M +E+ ++P + HY C++D+ R G +
Sbjct: 295 SCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRL 354
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA I+ M E +E +WS + CR H MEL AA LL+L+P++ Y +L +I+
Sbjct: 355 DEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIY 414
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
AG+WE VA +++ + KL + W+WI + +K Y F D HPQS EI+++L L+
Sbjct: 415 AKAGKWEKVAKFRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLI 474
Query: 662 EKAKCFGYKQQESFELTDEE----SASVY-HSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+K + GY F L D E +Y HSEKLAIAFGL+ P PI + K+ +C
Sbjct: 475 KKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCG 534
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH F K+++S+ R IIVRD+ R H F +G C+C D+
Sbjct: 535 DCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDY 572
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 219/452 (48%), Gaps = 21/452 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S + LL C N + + +HAH+V G+ QD + L+ Y + +++A +FD L
Sbjct: 5 SCIDLLLRCRN---VFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL 61
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ +W+ ++ G+ + F ++L G P N TL + C +++G+
Sbjct: 62 TMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGR 121
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH V+K+ D V SL +Y+ C + A + F R+ K++++WT +IGA +
Sbjct: 122 VIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DC 180
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
A + L F +M EG+ P++ + ++ + C + ++ + ++ G++ ++ +
Sbjct: 181 NAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGT 240
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG V+ A+++FD M N+++W+AMIA + H G +A+ +
Sbjct: 241 AMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGY-----------HGRGKDAIDL 289
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYK 434
F + S + P+ TF S+L CS +E+G + +++ + DV T +V++
Sbjct: 290 FHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLG 349
Query: 435 KCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTF 492
+ GR++ A R+ M+ + W++++ HS A + +L L P
Sbjct: 350 RAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVL 409
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
+ + A AG +E + F M + K+K +
Sbjct: 410 LSNIYA--KAGK-WEKVAKFRDMMTQRKLKKI 438
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + V+++ C ++ A + +IV+ G D + T ++++Y KCG++E
Sbjct: 195 EGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVES 254
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++VFD + NV+SW+++I+ Y + + + AI +F ML P VT + L ACS
Sbjct: 255 AREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSH 314
Query: 188 LESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWT 245
I G + ++ ++ D + L G L+ A++ + EK+ W+
Sbjct: 315 AGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWS 374
Query: 246 TVIGAC 251
++GAC
Sbjct: 375 ALLGAC 380
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/603 (33%), Positives = 343/603 (56%), Gaps = 15/603 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K +Y S+L+ C + +++H H++K+G D VM+ V +Y KC E+A K
Sbjct: 103 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIK 162
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P +V SW ++IS Y Q+ QPE A+ +F +M +G P +VTL T +++C+ L
Sbjct: 163 LFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK+IH +V+ D V ++L +Y CG L A + F +I+ KNV+SW ++I
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 282
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G++ + F +M EGI+P TL+SI C ++L++G +H I+ ++
Sbjct: 283 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 342
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +S++ LY KCG + A+ +F M N+V+WN MI+G+ ++
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKV-----------GSYL 391
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL IF+ + +G+KPD TF+S+L CS+L LE+G++IH +++ + VV AL+
Sbjct: 392 EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALL 451
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG ++ A +F ++ R +SWTSMI + +H + +AL+LFE M + +P++V
Sbjct: 452 DMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKV 511
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+ L+ACS+AG+V E YF M EY KP ++HY CLID+ R+G + EA++ +++
Sbjct: 512 TFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 571
Query: 551 M-DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
D + + S + C H ++LG L++ P D +Y +L +++ S +W++
Sbjct: 572 TPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDE 631
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK---VLDELVEKAKC 666
V V+ +E L + SWI + +++ F D HPQ+ I++ +L VEK +
Sbjct: 632 VRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQV 691
Query: 667 FGY 669
+
Sbjct: 692 LSF 694
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 285/578 (49%), Gaps = 54/578 (9%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ T+ +SLL+ C++ K L ++IH IV G + + L+N+Y C + A+ V
Sbjct: 1 MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60
Query: 132 FDNLPR-INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLE 189
F + +++ W L++ +N + VF +L P T + L ACS L
Sbjct: 61 FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ GK +H +V+K D V +S +Y+ C AIK F+ + E++V SW VI
Sbjct: 121 RVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVIS 180
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
++G+ + L F +M G +P+ TLT++ S C +L L G ++H ++ G+A
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V ++++ +Y KCG ++ A+++F+ + N+V+WN+MIAG+ S
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGY-----------SLKGDS 289
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+ +F +++ G++P L T SSIL CSR V L+ G+ IH ++ +D+ V ++L
Sbjct: 290 KSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSL 349
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y KCG I A VF M ++SW MI+G+ +AL +F DM AGV+P+
Sbjct: 350 IDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDA 409
Query: 490 VTFVGALAACSNAGMVYEALGYFE-MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---- 544
+TF L ACS ++ + +++ + +I V+ L+DM+ + G ++EA
Sbjct: 410 ITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVV--MGALLDMYAKCGAVDEALHIF 467
Query: 545 ------------------------------FDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
F+ +++ D +P++V + ++ C G ++
Sbjct: 468 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVD 527
Query: 575 LGFYAAEQLLK---LKPKDCESYAMLLDIFVSAGRWED 609
G Y Q++ KP E Y+ L+D+ GR +
Sbjct: 528 EGCYYFNQMIAEYGFKPA-VEHYSCLIDLLGRVGRLRE 564
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 126/398 (31%), Positives = 209/398 (52%), Gaps = 14/398 (3%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+ +P ++L E + V G K + + +++ C L + IH +V++G D
Sbjct: 185 DGQPEKALELFEEMKV--SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDG 242
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV + LV++YGKCG +E A++VF+ + R NVVSW S+I+GY + I +F M E
Sbjct: 243 FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 302
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G PT TL + L ACS +++LGK IH Y+++ + E D V +SL LY CG++ SA
Sbjct: 303 GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSA 362
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F + + NV+SW +I + G ++ L F+ M G++P+ T TS+ C +
Sbjct: 363 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 422
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G ++H+ I+ N V +++ +Y KCG VDEA +F+ + + V+W +MI
Sbjct: 423 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 482
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-E 408
A + +H EAL +F K+ S KPD TF +IL+ CS +++G
Sbjct: 483 AAYG-----------SHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCY 531
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ + + GF V + L+++ + GR+ A +
Sbjct: 532 YFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEIL 569
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/617 (32%), Positives = 339/617 (54%), Gaps = 15/617 (2%)
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SW + + + + A++++ ML +G+ P T A +C+SL G Q+H +V
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS--WTTVIGACGENGEAVQ 259
+K E + V SL S+Y C ++ SA K F+ ++ + +I N
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
+ F +M EG+ N T+ + VC + L G +H+ ++ G +L V N ++
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y++CG VD A+KLFDGM L+TWNAMI+G+AQ + L+ H L ++ K+
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQ------NGLAGH-----VLDLYRKM 251
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+G+ PD T +L+ C+ L A G ++ +GF + + AL+NMY +CG +
Sbjct: 252 EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNL 311
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+A +F M+ + +ISWT++I G+ H A+QLF++M+ + P+ FV L+AC
Sbjct: 312 VKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSAC 371
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S+AG+ + L YF M+++Y ++P +HY C++D+ R G +EEA I M EP+ +
Sbjct: 372 SHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAV 431
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + C+ H N+EL A E++++ +P + Y +L +IF AG E + V+ + RE
Sbjct: 432 WGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRE 491
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD 679
KL + S++ + +++ F D HPQ+ EI+ +LD L + K G E +
Sbjct: 492 RKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDNDQESRN 551
Query: 680 EE--SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRD 737
EE + HSEKLAIAFGL+NT + I V+K+ +C DCH F+K+++ + R+++VRD
Sbjct: 552 EELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRD 611
Query: 738 SKRLHKFVNGHCTCRDF 754
+ R H F NG C+C+D+
Sbjct: 612 ATRFHHFKNGVCSCKDY 628
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 227/479 (47%), Gaps = 21/479 (4%)
Query: 52 EPVRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
E R FQEAL++ L G ++ + C + +H H++KTG
Sbjct: 30 ELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEP 89
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFD--NLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+ FV T L+++Y KC + A+KVFD + R V + +LI+GY NS+ A+ +F
Sbjct: 90 EPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQ 149
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M + G VT+ + C+ + G +HA V++ + D SVGN L ++Y CGS
Sbjct: 150 MRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGS 209
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
++ A K F+ + EK +++W +I +NG A L + KM GI P+ TL + S
Sbjct: 210 VDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSS 269
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C + + G +V G+ N ++N+++ +Y +CG + +A+ +FDGM+ N+++W
Sbjct: 270 CAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISW 329
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
A+IAG+ H G A+ +F ++ SS PD F S+L+ CS E
Sbjct: 330 TAIIAGYGM-----------HGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTE 378
Query: 406 QG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG 463
+G A+ G + +V++ + GR+E A ++ MS + W +++
Sbjct: 379 KGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGA 438
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
H A FE ++ P + + L+ + E + +M +E K+K
Sbjct: 439 CKIHRNVELAELAFEKVI--EFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLK 495
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/730 (31%), Positives = 390/730 (53%), Gaps = 45/730 (6%)
Query: 54 VRSLGFQEALSVLTE-----GPKVQTSSYVSLLQECVNRK--SLSNAEIIHAHIVKTGSH 106
+R+ +EAL + + P + ++VS+L CV SL + IH IV G
Sbjct: 221 LRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIE 280
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVF----DNLPRINVVSWTSLISGYVQNSQPELAIHV 162
++ FV T LV+ YGK G++++A +VF D P ++V+ +++IS QN P+ ++ +
Sbjct: 281 REAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRL 340
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-----DDTSVGNSLC 217
F M G P+ VTL + L ACS L+ +G A+V++ E D +G +L
Sbjct: 341 FFAMNLEGTKPSGVTLVSVLNACSMLQ---VGSAT-AFVLEQAMEVVSATRDNVLGTTLL 396
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
+ Y+ L A F+ I+ +V+SW + A ++ + + L F +ML EG++P+
Sbjct: 397 TTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVA 456
Query: 278 TLTSISSVCGT---MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
T + + C + +G ++ SL + G + V N+ + +Y KCG + +A+ +F
Sbjct: 457 TFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVF 516
Query: 335 DGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM-KPDLYTF 391
+ +S + +TWN+M+A + H G EA +F + + + KP+ TF
Sbjct: 517 ERISPARRDCITWNSMLAAYGH-----------HGLGKEAFELFQAMEAEKLVKPNKVTF 565
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
++L + ++ QG +IHA + GF SD V+ AL+NMY KCG ++ A +F + S+
Sbjct: 566 VAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 625
Query: 452 --RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+I+WTS+I G+A + + +AL+LF M GVRPN VTF+ AL AC++ G + +
Sbjct: 626 NQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGC 685
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
M ++ I P H+ C++D+ R G ++EA +++ + + + W + C+
Sbjct: 686 ELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKN 744
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+E G AE++++L P+ SY +L ++ +AGRW + A ++ ++ + S
Sbjct: 745 SKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCS 804
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESAS 684
+ + +++SF D HP+S EI+ L+ L K GY L D +E
Sbjct: 805 AVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLL 864
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
+ HSEKLAIAFGL++TP SP+ V+K+ +C DCH K+I+ +T R+I++RDS R H F
Sbjct: 865 MRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHF 924
Query: 745 VNGHCTCRDF 754
+G C+C D+
Sbjct: 925 TSGTCSCGDY 934
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 272/554 (49%), Gaps = 48/554 (8%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIV--KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
S+Y LLQ C ++L + +HAHI+ + H F+ + L+ ++ KCGN+ EA+ +
Sbjct: 44 STYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALA 103
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
D +V S T++I ++++ +P+ A+ +F D +E P L + ACS L ++
Sbjct: 104 DRFA--SVYSCTAMIRAWMEHGRPDKAMELF-DRMEV--RPNCHALIALVNACSCLGNLA 158
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI---REKNVMSWTTVIG 249
G++IH+ + E+++ +GN+L S+YS CGSL A +AF+R+ +++V++W +I
Sbjct: 159 AGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMIS 218
Query: 250 ACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVC--GTMLSLRVGAQVHSLGIKLG 306
A NG A + L+ F M +G PN T S+ C +LSL +H + G
Sbjct: 219 AFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG 278
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLF----DGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
VR +++ Y K G +D+A ++F D +LVT +AMI+ Q
Sbjct: 279 IEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQ-------- 330
Query: 363 LSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRL-------VALEQGEQIHALT 414
NG E+L +F +N G KP T S+L CS L LEQ ++ + T
Sbjct: 331 ----NGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT 386
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
D V+GT L+ Y + + RA F + + ++SW +M + H S +AL
Sbjct: 387 ------RDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREAL 440
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALG-YFEMMQKEYKIKPVMDHYMCLI 532
LFE MLL GVRP+ TF+ AL AC+ A+G + + +E ++ +
Sbjct: 441 VLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATL 500
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGF--YAAEQLLKLKPK 589
+M+ + G + +A +++ + I W+ +A HG + F + A + KL
Sbjct: 501 NMYAKCGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKP 560
Query: 590 DCESYAMLLDIFVS 603
+ ++ +LD S
Sbjct: 561 NKVTFVAVLDASTS 574
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 224/709 (31%), Positives = 375/709 (52%), Gaps = 36/709 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC-----GNMEEAQK 130
S +SLL++C KS+ + IH+H +K G D F V C G M A++
Sbjct: 9 SPISLLEKC---KSMYQLKQIHSHTIKMGLSSDPL---FQKRVIAFCCAHESGKMIYARQ 62
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P+ + W ++I GY + + P+ + ++L ML + P T L + +
Sbjct: 63 VFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMA 122
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ GK + + VK+ + + V + ++S C ++ A K F+ V++W ++
Sbjct: 123 LQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSG 182
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ + F +M G+ PN TL + S C + L G ++ N
Sbjct: 183 YNRVKQFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERN 242
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLAK-------- 360
L + N ++ ++ CG +DEAQ +FD M + ++++W +++ G A + +DLA+
Sbjct: 243 LILENVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPE 302
Query: 361 ----------DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
D N EAL++F ++ S +KPD +T SILT C+ L ALE GE +
Sbjct: 303 RDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWV 362
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
K +D VG AL++MY KCG + +A +VF EM + +WT+MI G A +
Sbjct: 363 KTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHG 422
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL +F +M+ A + P+++T++G L AC++AGMV + +F M ++ IKP + HY C
Sbjct: 423 EEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGC 482
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G +EEA + I M +PN ++W + CR H N++L AA+Q+L+L+P++
Sbjct: 483 MVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPEN 542
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
Y +L +I+ + RWE++ V+ L E + +T S + + VY F D HPQS
Sbjct: 543 GAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQS 602
Query: 651 AEIFKVLDELVEKAKCFGYKQQES---FEL--TDEESASVYHSEKLAIAFGLLNTPIVSP 705
EI+ L+ +++ GY S +L D+E+A HSEKLAIA+ L+++
Sbjct: 603 KEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGIT 662
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I +VK+ MC DCH+ K+++ RE+IVRD R H F +G C+C +F
Sbjct: 663 IRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNF 711
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 211/437 (48%), Gaps = 44/437 (10%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G L +L K ++ LL+ +L +++ H VK G + FV ++
Sbjct: 91 GVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIH 150
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
++ C ++ A+KVFD VV+W ++SGY + Q + + +F++M + G P +VT
Sbjct: 151 MFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVT 210
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L L+ACS L+ + GK I+ Y+ E + + N L +++ CG ++ A F+ ++
Sbjct: 211 LVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK 270
Query: 238 EKNVMSWTTVIGACGENGEA-------------------------------VQGLRFFSK 266
++V+SWT+++ G+ ++ L F +
Sbjct: 271 NRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFRE 330
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M ++P+EFT+ SI + C + +L +G V + K ++ V N+++ +Y KCG
Sbjct: 331 MQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGN 390
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
V +A+K+F M H + TW AMI G L+ + G EAL++FS + + + P
Sbjct: 391 VGKAKKVFKEMHHKDKFTWTAMIVG-----------LAINGHGEEALAMFSNMIEASITP 439
Query: 387 DLYTFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
D T+ +L C+ +E+G+ ++T++ G +V +V++ + GR+E A V
Sbjct: 440 DEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEV 499
Query: 446 FVEMSTR-TLISWTSMI 461
V M + I W S++
Sbjct: 500 IVNMPVKPNSIVWGSLL 516
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/632 (32%), Positives = 347/632 (54%), Gaps = 15/632 (2%)
Query: 54 VRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR+ F E L + L EG V +++ S + C + +HA+ +KT D
Sbjct: 247 VRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDN 306
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T +++Y KC M +A+KVF+ P S +LI GY + Q A+ +F + ++
Sbjct: 307 IVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKS 366
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
++L ALTACS+++ G Q+H VK + + V N++ +Y+ CG+L A
Sbjct: 367 YLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEA 426
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+ + K+ +SW +I A +N + L F ML ++P+++T S+ C
Sbjct: 427 CLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK 486
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+L G +VH IK G + V ++I+ +Y KCG++ EA+K+ + + V+WN++I
Sbjct: 487 KALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSII 546
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G S+ G ALS FS++ G+ PD +T++++L IC+ L +E G+Q
Sbjct: 547 SG-----------FSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQ 595
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH LK SDV + + +V+MY KCG ++ + +F + R ++W++MI +A H L
Sbjct: 596 IHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGL 655
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
A++LFE+M L V+PN F+ L AC++ G V + L YF M+ Y + P M+HY
Sbjct: 656 GEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYS 715
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R G + EA + I+ M FE ++VIW + CR GN+E+ AA LL+L P+
Sbjct: 716 CMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQ 775
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D +Y +L +++ AG W +VA +++ + KL + SWI+++D+V++F D HP+
Sbjct: 776 DSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPR 835
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEE 681
S EI++ LV++ K GY + L DEE
Sbjct: 836 SEEIYQQTHLLVDEMKWDGYVPEIDGFLLDEE 867
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 254/521 (48%), Gaps = 25/521 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+++ +L+ C + +H ++ G D T LV++Y C ++ A +F
Sbjct: 171 ATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCE 230
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P N V W+++I+GYV+N + + ++ ML+ G + T +A +C+ L + LG
Sbjct: 231 MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELG 290
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+HAY +K D VG + +Y+ C + A K FN S +I
Sbjct: 291 TQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQ 350
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ ++ L F + + +E +L+ + C + G Q+H L +K G N+ V
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+I+ +Y KCG + EA +FD M + V+WNA+IA H Q + E L+
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQ-----------NEHVEETLA 459
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F + S M+PD YTF S++ C+ AL G ++H +K+G D VG+A+++MY
Sbjct: 460 LFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYC 519
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + A ++ + RT +SW S+I+GF++ AL F ML GV P+ T+
Sbjct: 520 KCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYAT 579
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIK 549
L C+N V LG ++ + K++ D Y+ ++DM+ + G ++++ F+
Sbjct: 580 VLDICANLATV--ELGK-QIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAP 636
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
K D+ V WS I HG E + + QL +KP
Sbjct: 637 KRDY----VTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKP 673
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/561 (27%), Positives = 263/561 (46%), Gaps = 53/561 (9%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC------------- 122
++ + Q+C N K+++ + HA I TG FV L+ Y KC
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 123 ------------------GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
GNME AQ +FD++P +VVSW S++S Y+QN +I +F
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
M T L AC+ +E LG Q+H ++ + D G +L +YSTC
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCK 219
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L+ A F + E+N + W+ VI N +GL+ + ML EG+ ++ T S
Sbjct: 220 KLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFR 279
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + + +G Q+H+ +K + + V + + +Y KC + +A+K+F+ + +
Sbjct: 280 SCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQS 339
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
NA+I G+A+ +D + EAL IF L S + D + S LT CS +
Sbjct: 340 HNALIVGYAR-----QDQV------LEALEIFRSLQKSYLDFDEISLSGALTACSAIKGY 388
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+G Q+H L +K G ++ V +++MY KCG + A +F +M + +SW ++I
Sbjct: 389 LEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAH 448
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKP 523
+ + L LF ML + + P+ TF + AC+ +AL Y E+ + K
Sbjct: 449 EQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGK----KALNYGMEVHGRVIKSGM 504
Query: 524 VMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG--CRRHGNMELGFYA 579
+D ++ +IDM+ + G + EA ++++ E V W+ I+G + G L +++
Sbjct: 505 GLDWFVGSAIIDMYCKCGMLVEAEKIHERLE-ERTTVSWNSIISGFSSEKQGENALSYFS 563
Query: 580 AEQLLKLKPKDCESYAMLLDI 600
+ + P D +YA +LDI
Sbjct: 564 RMLQVGVIP-DNFTYATVLDI 583
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 20/245 (8%)
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ T + I C + ++ G Q H+ G+ + V N ++ Y KC ++ A +FD
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 336 GMSHVNLVTWNAMIAGHAQM--MDLA---------KDDLS--------AHNG-GTEALSI 375
M ++++WN MI G+A + M+ A +D +S NG +++ I
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F+K+ ++ D TF+ +L C+ + G Q+H L ++ GF SDVV GTALV+MY
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
C +++ A +F EM R + W+++I G+ + + L+L++ ML G+ +Q TF A
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277
Query: 496 LAACS 500
+C+
Sbjct: 278 FRSCA 282
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/640 (35%), Positives = 353/640 (55%), Gaps = 37/640 (5%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + +V SW S+I+ ++ A+ F M + YPT + A+ ACSSL I G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSG 95
Query: 195 KQIH--AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQ H A+V YQ+ D V ++L +YSTCG L A K F+ I ++N++SWT++I
Sbjct: 96 KQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 253 ENGEAVQGLRFFSKMLSEGIQPN------EFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
NG A+ + F +L E + + S+ S C + + + +HS IK G
Sbjct: 154 LNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG 213
Query: 307 YASNLRVRNSIMYLYLKCGL--VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+ + V N+++ Y K G V A+K+FD + + V++N++++ +AQ
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ---------- 263
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTF-----SSILTICSRLVALEQGEQIHALTLKTGF 419
EA +F +L +K + TF S++L S AL G+ IH ++ G
Sbjct: 264 -SGMSNEAFDVFRRL----IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV+VGT++++MY KCGR+E A F M + + SWT+MI G+ H + +AL+LF
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M+ +GVRPN +TFV LAACS+AG+ +F M+ + ++P ++HY C++D+ R G
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+++A+D I+KM EP+ +IWS +A CR H N+EL + +L +L P +C Y +L
Sbjct: 439 FLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSH 498
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +GRW+DV V+ + L + +S + + +V+ F D HPQ +I++ L E
Sbjct: 499 IYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAE 558
Query: 660 LVEKAKCFGYKQQES--FELTDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L K GY S DEE + HSEKLAIAFG++NT S + VVK+ +
Sbjct: 559 LNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRV 618
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHN IK+I+ + RE +VRD+KR H F +G C+C D+
Sbjct: 619 CSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGFCSCGDY 658
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 235/483 (48%), Gaps = 35/483 (7%)
Query: 4 VPWAAAAACT----LETKSRQPSSSLATL----KDKNHTVSYQRSGSKLIQLNGNSEPVR 55
VP A C+ L T+ +L TL DK S+ + L + ++E +R
Sbjct: 3 VPSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALR 62
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+ LS+ SS+ ++ C + + + + H G D FV + L
Sbjct: 63 AFSSMRKLSLYP-----TRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSAL 117
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML------EA 169
+ +Y CG +E+A+KVFD +P+ N+VSWTS+I GY N A+ +F D+L +A
Sbjct: 118 IVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDA 177
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
+ ++ + + ++ACS + + L + IH++V+K + SVGN+L Y+ G A
Sbjct: 178 TMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA 237
Query: 230 I--KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP-NEFTLTSISSVC 286
+ K F++I +K+ +S+ +++ ++G + + F +++ E + N TL+++
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAV 297
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+LR+G +H I++G ++ V SI+ +Y KCG V+ A+ FD M + N+ +W
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWT 357
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
AMIAG+ H +AL +F + SG++P+ TF S+L CS +
Sbjct: 358 AMIAGYGM-----------HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDV 406
Query: 407 G-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGF 464
G +A+ + G + +V++ + G +++A + +M I W+S++
Sbjct: 407 GWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAAC 466
Query: 465 ANH 467
H
Sbjct: 467 RIH 469
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 181/372 (48%), Gaps = 42/372 (11%)
Query: 233 FNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FNR +K +V SW +VI +G++ + LR FS M + P + C ++L
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLD 91
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G Q H GY S++ V ++++ +Y CG +++A+K+FD + N+V+W +MI G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKL------NSSGMKPDLYTFSSILTICSRLVALE 405
+ DL+ + +A+S+F L + + M D S+++ CSR+ A
Sbjct: 152 Y---------DLNGN--ALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKG 200
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR--IERASRVFVEMSTRTLISWTSMITG 463
E IH+ +K GF V VG L++ Y K G + A ++F ++ + +S+ S+++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 464 FANHSLSHQALQLFEDMLLAGVRP-NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A +S++A +F ++ V N +T L A S++G AL + + +
Sbjct: 261 YAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSG----ALRIGKCIHDQVIRM 316
Query: 523 PVMDHYMC---LIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ D + +IDM+ + G +E AFD +K + W+ IAG HG+
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRS----WTAMIAGYGMHGH---- 368
Query: 577 FYAAEQLLKLKP 588
A + L+L P
Sbjct: 369 ---AAKALELFP 377
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 239/725 (32%), Positives = 392/725 (54%), Gaps = 57/725 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN--VYGKCGNMEEAQ 129
++ Y++LL++C K+++ + IH+ I+KTG + FV + L++ G++ A
Sbjct: 26 LEQHPYLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYAL 82
Query: 130 KVFD---NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+F+ + NV W SLI GY +S P ++H+F ML G P + T +C+
Sbjct: 83 SLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCT 142
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS--------------------- 225
++ GKQ+HA+ +K + V S+ +Y++ G
Sbjct: 143 KAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTA 202
Query: 226 ----------LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L+ A + F+ I K+V+SW +I ++G + + F +M + PN
Sbjct: 203 LITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPN 262
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ T+ + S CG S +G + S G+ SNL++ N+++ +Y KCG D A++LFD
Sbjct: 263 KSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFD 322
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
G+ ++++WN MI G++ LS + EAL++F + S +KP+ TF IL
Sbjct: 323 GIEEKDVISWNTMIGGYSY--------LSLYE---EALALFEVMLRSNVKPNDVTFLGIL 371
Query: 396 TICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C+ L AL+ G+ +HA K S+ + T+L++MY KCG IE A RVF M +R L
Sbjct: 372 HACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNL 431
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGV-RPNQVTFVGALAACSNAGMVYEALGYFE 513
SW +M++GFA H + +AL LF +M+ G+ RP+ +TFVG L+AC+ AG+V YF
Sbjct: 432 ASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFR 491
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M ++Y I P + HY C+ID+ R EEA +K M+ EP+ IW ++ C+ HG +
Sbjct: 492 SMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRV 551
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
E G Y AE+L +L+P++ ++ +L +I+ AGRW+DVA ++ ++ + + + I I
Sbjct: 552 EFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEI 611
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHS 688
V+ F D HP+ I+K+L+E+ + + G+ S L D +E A HS
Sbjct: 612 DGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHS 671
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLAI+FGL+ T + I +VK+ +C +CH+ K+I+ + REII RD R H F +G
Sbjct: 672 EKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGF 731
Query: 749 CTCRD 753
C+C D
Sbjct: 732 CSCND 736
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 204/439 (46%), Gaps = 48/439 (10%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + ++ L + C K+ + +HAH +K H + V T ++++Y G
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181
Query: 125 MEEAQKVFDNLPRINVVSWTSL-------------------------------ISGYVQN 153
M+ A+ VFD + VS+T+L ISGYVQ+
Sbjct: 182 MDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQS 241
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+ E AI F +M EA P T+ L+AC S LGK I ++V + +
Sbjct: 242 GRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLT 301
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L +Y CG + A + F+ I EK+V+SW T+IG + L F ML ++
Sbjct: 302 NALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVK 361
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHS-LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
PN+ T I C + +L +G VH+ + L +SN + S++ +Y KCG ++ A++
Sbjct: 362 PNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAER 421
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM-KPDLYTF 391
+F M NL +WNAM++G A H AL++FS++ + G+ +PD TF
Sbjct: 422 VFRSMHSRNLASWNAMLSGFAM-----------HGHAERALALFSEMVNKGLFRPDDITF 470
Query: 392 SSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF--VE 448
+L+ C++ ++ G Q ++ G + ++++ + + E A + +E
Sbjct: 471 VGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME 530
Query: 449 MSTRTLISWTSMITGFANH 467
M I W S+++ H
Sbjct: 531 MEPDGAI-WGSLLSACKAH 548
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 54 VRSLGFQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V+S F+EA+ E + S+ V +L C + +S + I + + G +
Sbjct: 239 VQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNL 298
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ L+++Y KCG + A+++FD + +V+SW ++I GY S E A+ +F ML +
Sbjct: 299 QLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRS 358
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNS 228
P +VT L AC+ L ++ LGK +HAY+ K + + S+ SL +Y+ CG + +
Sbjct: 359 NVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEA 418
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCG 287
A + F + +N+ SW ++ +G A + L FS+M+++G+ +P++ T + S C
Sbjct: 419 AERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACT 478
Query: 288 TMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ +G Q S+ G + L+ ++ L + +EA+ L M
Sbjct: 479 QAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNM 529
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 328/588 (55%), Gaps = 13/588 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+++ C A +HAH++K+ D L+++Y K M +A VF +
Sbjct: 201 TFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI 260
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
+++SW S+I+G+ Q A+ F +ML Y P G+A +ACS L G
Sbjct: 261 IIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCG 320
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+QIH +K+ D G SLC +Y+ CG L SA F I + ++++W +I
Sbjct: 321 RQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV 380
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
A + FFS+M G+ PN+ T+ S+ C + L G QVHS +K+G+ ++ V
Sbjct: 381 SNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVC 440
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC +++A ++F+ + + ++V+WN ++ Q N E L
Sbjct: 441 NSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQ-----------QNQAGEVL 489
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ + +S +KPD T +++L ++ + E G QIH +K+G D+ V AL+NMY
Sbjct: 490 RLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMY 549
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E A ++F + +ISW+S+I G+A +A +LF M GV+PN++TFV
Sbjct: 550 TKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFV 609
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+ GMV E L + MQ++Y+I P +H C++D+ R GC++ A DFI++M F
Sbjct: 610 GILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPF 669
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P+ V+W +A C+ HGN+E+G AAE +LK+ P + + ML +I S+G W+D A +
Sbjct: 670 VPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARL 729
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
++ R + + SWI IKDKV+ F D LHP+ +I+ +L+EL+
Sbjct: 730 RSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELM 777
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/572 (29%), Positives = 301/572 (52%), Gaps = 50/572 (8%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+++ +Y L+ C + +SL + IH H++ D + ++++YGKCG+++EA+ +
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD++P NVVSWTS+ISGY + + + AI +++ ML +G+ P + T G+ + +CS L+
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+L +Q+HA+V+K + D N+L S+Y+ + AI F+RI K+++SW ++I
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 252 GENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G ++ L F +MLS+ + QPNEF S S C +L G Q+H L IK G S+
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
L S+ +Y KCG ++ A+ +F + +LV WNA+IAG A + +
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASV-----------SNAK 384
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
E+ S FS++ +G+ P+ T S+L CS V L G Q+H+ +K GF D+ V +L+
Sbjct: 385 ESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLL 444
Query: 431 NMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+MY KC + A +VF ++ + ++SW +++T + + + L+L + M + ++P+
Sbjct: 445 SMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDH 504
Query: 490 VTF--------------VGALAAC-------------SNAGM-VYEALGYFEMMQKEYKI 521
VT VG+ C SNA + +Y G E +K +
Sbjct: 505 VTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDS 564
Query: 522 --KPVMDHYMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG 576
P + + LI + + GC +EAF+ + M +PNE+ + + C G +E G
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEG 624
Query: 577 ---FYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++ ++ P E + ++D+ AG
Sbjct: 625 LKLYRTMQEDYRISPTK-EHCSCMVDLLARAG 655
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+++ L K +L H +A IF K +SS +K T++ ++ CS L +LE G +IH
Sbjct: 68 KIISLCKKNL--HREALKAFDIFQKCSSSPLKS--VTYTHLINACSSLRSLEHGRKIHRH 123
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
L + D+++ +++MY KCG ++ A +F M + ++SWTSMI+G++ + A
Sbjct: 124 MLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNA 183
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLI 532
+ L+ ML +G P+ TF + +CS A + +++ E+ + + LI
Sbjct: 184 ITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQN--ALI 241
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
M+ + + +A + ++ + + + W IAG + G
Sbjct: 242 SMYTKFSQMADAINVFSRIIIK-DLISWGSMIAGFSQLG 279
>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 682
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/671 (32%), Positives = 366/671 (54%), Gaps = 22/671 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
LS + +HA ++ T +H D + L++ Y KCG + A+ VFD +P N VS L+SG
Sbjct: 27 LSKGKALHARLI-TAAHFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLMSG 85
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y + + + + L +L ++ N L A++A +++ S +G+Q H Y VK +
Sbjct: 86 YASSGRHKES----LQLLRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAE 141
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V N++ +Y C + A K F + + ++ ++I + G+ L M
Sbjct: 142 QRYVFNAVLYMYCQCAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
E + + + ++ C +M +GAQVH+ +K N+ V ++++ +Y KC V
Sbjct: 202 GEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCDHVH 261
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+A + F+ + N+V+W A++ + Q +L +D AL +F + G++P+
Sbjct: 262 DANRAFEVLPEKNVVSWTAVMTAYTQN-ELYED----------ALQLFLDMEMEGVQPNE 310
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+T++ L C+ L AL G + A +KTG ++V AL+NMY K G IE A RVF+
Sbjct: 311 FTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFIS 370
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M R ++SW +ITG+A+H L+ + ++ F ML A V P+ VTFVG L+AC+ G+V EA
Sbjct: 371 MPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEA 430
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
Y M KE I P +HY C++ + R+G ++EA FI + V W + C+
Sbjct: 431 FYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQ 490
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ N LG AEQ+L+L+P D +Y +L +++ A RW+ V V+ RE + ++
Sbjct: 491 VYKNYGLGHRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGV 550
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
SWI + V+ F + +HPQ +I K L+EL+++ K GY + L D +E
Sbjct: 551 SWIHVGSDVHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEH 610
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+YHSEKLA+AFGL++TP + I ++K+ +C DCH IK+I+ +T+R+I+VRD+ R H
Sbjct: 611 LMYHSEKLALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHC 670
Query: 744 FVNGHCTCRDF 754
G C+C D+
Sbjct: 671 IEGGICSCNDY 681
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 155/306 (50%), Gaps = 10/306 (3%)
Query: 46 QLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
QL+G+ VR++ E K SYV++L C + K +HA +K
Sbjct: 189 QLDGSLGIVRNM--------TGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRL 240
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+ +V + LV++YGKC ++ +A + F+ LP NVVSWT++++ Y QN E A+ +FLD
Sbjct: 241 ELNVYVGSALVDMYGKCDHVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLD 300
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G P T AL +C+ L ++R G + A V+K D V N+L ++YS GS
Sbjct: 301 MEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGS 360
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ A + F + ++V+SW +I +G A +G+ F MLS + P+ T + S
Sbjct: 361 IEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSA 420
Query: 286 CGTM-LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK-LFDGMSHVNLV 343
C + L ++++ ++G ++ L + G +DEA++ + + ++V
Sbjct: 421 CAQLGLVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVV 480
Query: 344 TWNAMI 349
W +++
Sbjct: 481 AWRSLL 486
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
Q L + EG + +Y L C +L + A ++KTG V L+N
Sbjct: 294 ALQLFLDMEMEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMN 353
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G++E+A +VF ++P +VVSW +I+GY + + F ML A P+ VT
Sbjct: 354 MYSKSGSIEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVT 413
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS----LCSLYSTCGSLNSAIK-A 232
L+AC+ L L + Y+ E + G + L G L+ A +
Sbjct: 414 FVGVLSACAQLG---LVDEAFYYLNTMMKEVGITPGKEHYTCMVGLLCRVGRLDEAERFI 470
Query: 233 FNRIREKNVMSWTTVIGAC 251
N +V++W +++ +C
Sbjct: 471 VNNCIGTDVVAWRSLLNSC 489
>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
Length = 721
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/700 (31%), Positives = 378/700 (54%), Gaps = 36/700 (5%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++Q+ S+ + ++ C + S+S IIH I + G ++ LV + K G++ EA+
Sbjct: 41 EIQSDSFAAAIRSCKDSNSVS---IIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARS 97
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD + N+ SW +IS Y P A+H+F M PT +T TAL+ACSSL
Sbjct: 98 IFDAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGD 154
Query: 191 IRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ G++IHA + + + ++ S+Y+ CG L++A F+RI KNV+SW +I
Sbjct: 155 LQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKSVFDRIPAKNVVSWNALIA 214
Query: 250 ACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A ++G + Q L F KM G++P T + C + SL ++H+ ++ G
Sbjct: 215 AYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDVTSLE---KIHARIVETGLQ 271
Query: 309 SNLR---VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
++R V+N+++ +Y KCG ++ A+ +F M + V+ N MIA AQ
Sbjct: 272 FDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQ----------- 320
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-----L 420
G E++ +F +++ G+ D TF+S++T CS ALE G++IH ++ L
Sbjct: 321 QGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCL 380
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+VVV TALV+MY KCG +E+A VF M+T+ +SW +M+ A+ +A
Sbjct: 381 PNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAA 440
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
GV + +F+ L ACS++GM+ A +F++M ++ + P ++Y C++D+ R G
Sbjct: 441 ACEGVELDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGR 500
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ +A + + M F P+ + W + GCR G++E AAEQ L+P++ Y +L +
Sbjct: 501 LGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSL 560
Query: 601 FVSAGRWEDVAVVKNLTREEKLSE-TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
+ + G+ +++ +++ +E L + S I + +V+ F D HPQ +I + LD
Sbjct: 561 YSATGKKDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDI 620
Query: 660 LVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L + K G+ + D+E HSEKLA+AFGL++T P+LV+K+ +
Sbjct: 621 LNVELKQAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRV 680
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH IK+I+ L +R I VRD+ R H+F +G C+C D+
Sbjct: 681 CSDCHGAIKLISKLRSRVITVRDANRFHRFQSGTCSCGDY 720
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 326/578 (56%), Gaps = 17/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC++ + LG+ +H VK T+ N+L +Y+ CG L+ AI F+ + + V
Sbjct: 5 LQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRTV 64
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++WT++I A G + + +R F +M EG+ P+ FT+T++ C SL G VH+
Sbjct: 65 VTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNY 124
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+ SN+ V N++M +Y KCG +++A +F M ++++WN MI G++ K+
Sbjct: 125 IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS------KN 178
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
L EALS+F + MKPD T + IL C+ L +L++G+++H L+ GF S
Sbjct: 179 SLP-----NEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFS 232
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D V ALV+MY KCG A +F + T+ LI+WT MI G+ H + A+ F +M
Sbjct: 233 DQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMR 292
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
AG+ P++V+F+ L ACS++G++ E +F +MQ E +KP ++HY C++D+ R G +
Sbjct: 293 QAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKL 352
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
A+ FIK M EP+ IW ++GCR H +++L AE + +L+P++ Y +L + +
Sbjct: 353 AMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTY 412
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
A +WE+V ++ L + SWI +K KV+ F + HPQ+ +I +L L
Sbjct: 413 AEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLR 472
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K K GY + + L + +E+A HSEKLA+AFG+LN P I V K+ +C
Sbjct: 473 SKMKEEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCG 532
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH K I+ REI++RDS R H F +G C CR F
Sbjct: 533 DCHEMAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGF 570
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 176/330 (53%), Gaps = 12/330 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
VS+LQ C N +S +H VK H L+++Y KCG ++ A VFD +
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV 61
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
VV+WTSLI+ Y + + AI +F +M G P T+ T L AC+ S+ GK +
Sbjct: 62 RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDV 121
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H Y+ + + + V N+L +Y+ CGS+ A F + K+++SW T+IG +N
Sbjct: 122 HNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLP 181
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L F M+ E ++P+ TL I C ++ SL G +VH ++ G+ S+ +V N++
Sbjct: 182 NEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANAL 240
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y+KCG+ A+ LFD + +L+TW MIAG+ H G A++ F+
Sbjct: 241 VDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGM-----------HGFGNNAITTFN 289
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQG 407
++ +G++PD +F SIL CS L++G
Sbjct: 290 EMRQAGIEPDEVSFISILYACSHSGLLDEG 319
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 160/299 (53%), Gaps = 26/299 (8%)
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ SI C + +G VH G+K N+++ +Y KCG++D A +FD MS
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+VTW ++IA + A++ LS EA+ +F +++ G+ PD++T +++L C
Sbjct: 61 VRTVVTWTSLIAAY------AREGLS-----DEAIRLFHEMDREGVSPDIFTITTVLHAC 109
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ +LE G+ +H + S++ V AL++MY KCG +E A+ VF+EM + +ISW
Sbjct: 110 ACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWN 169
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV---YEALGYFEMM 515
+MI G++ +SL ++AL LF DM+L ++P+ T L AC++ + E G+ +
Sbjct: 170 TMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHI-LR 227
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + V + L+DM+V+ G A FD I D + W+V IAG HG
Sbjct: 228 NGFFSDQQVAN---ALVDMYVKCGVPVLARLLFDMIPTKDL----ITWTVMIAGYGMHG 279
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 1/219 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++L C SL N + +H +I + + FV L+++Y KCG+ME+
Sbjct: 93 EGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMED 152
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF +P +++SW ++I GY +NS P A+ +F DM+ P TL L AC+S
Sbjct: 153 ANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMK-PDGTTLACILPACAS 211
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ GK++H ++++ D V N+L +Y CG A F+ I K++++WT +
Sbjct: 212 LASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVM 271
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
I G +G + F++M GI+P+E + SI C
Sbjct: 272 IAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYAC 310
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 9/200 (4%)
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
SIL C+ + G +H +K L++MY KCG ++ A VF MS R
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
T+++WTS+I +A LS +A++LF +M GV P+ T L AC+ G +
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 513 EMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+++ + ++C L+DM+ + G +E+A +M + + + W+ I G ++
Sbjct: 123 NYIRENDMQSNI---FVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGYSKN 178
Query: 571 G--NMELGFYAAEQLLKLKP 588
N L + + +L++KP
Sbjct: 179 SLPNEALSLF-GDMVLEMKP 197
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 60 QEALSVLTE---GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EALS+ + K ++ +L C + SL + +H HI++ G D V LV
Sbjct: 182 NEALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG A+ +FD +P ++++WT +I+GY + AI F +M +AG P V
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301
Query: 177 TLGTALTACS 186
+ + L ACS
Sbjct: 302 SFISILYACS 311
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/718 (31%), Positives = 387/718 (53%), Gaps = 30/718 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVN-RKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGK 121
+L EG + + + VS+L C + + L HA +K G + F L+++Y +
Sbjct: 153 MLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYAR 212
Query: 122 CGNMEEAQKVFDNL-----PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
G +++AQ +F ++ P VV+W +++S VQ+ + AI V DM+ G P +
Sbjct: 213 LGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGI 272
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T +AL ACS LE + LG+++HAYV+K ++ V ++L +Y++ + A + F+
Sbjct: 273 TFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDM 332
Query: 236 IR--EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSL 292
+ + + W ++ + G + L F++M +E G+ P+E T+ + C +
Sbjct: 333 VPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETF 392
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG- 351
VH +K G A N V+N++M LY + G ++ A+ +F + ++V+WN +I G
Sbjct: 393 AGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGC 452
Query: 352 --HAQMMDLAK--DDLSAHNGGTEALSI--FSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+ D + ++ T+A + + + + P+ T ++L C+ L A
Sbjct: 453 VVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPA 512
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+G++IH ++ SD+ VG+ALV+MY KCG + + VF + R +I+W +I +
Sbjct: 513 KGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYG 572
Query: 466 NHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
H L +A+ LF+ M+++ +PN+VTF+ ALAACS++GMV + F M++ + ++P
Sbjct: 573 MHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPT 632
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE---VIWSVFIAGCRRHGNMELGFYAAE 581
D + C +D+ R G ++EA+ I M EP E WS F+ CR H N+ LG AAE
Sbjct: 633 PDLHACAVDILGRAGRLDEAYSIITSM--EPGEQQVSAWSSFLGACRLHRNVPLGEIAAE 690
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
+L +L+P + Y +L +I+ +AG WE + V+N R+ +S+ SWI + ++ F
Sbjct: 691 RLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFM 750
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFG 696
+ HP+S + +D L E+ + GY S L D EES YHSEKLAIAFG
Sbjct: 751 AGESAHPESTLVHAHMDALWERMRNQGYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFG 810
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
LL TP + I V K+ +C DCH K I+ + REI++RD +R H FV+G C+C D+
Sbjct: 811 LLRTPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFVDGACSCGDY 868
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 234/502 (46%), Gaps = 65/502 (12%)
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+ Y +CG++ A +F+ +P + V++ SLI+ + A+ DML G
Sbjct: 98 VANALLTAYARCGDLTAALALFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEG 157
Query: 171 NYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLN 227
+ ++ TL + L ACS L E +RLG++ HA+ +K + D+ N+L S+Y+ G ++
Sbjct: 158 HPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVD 217
Query: 228 SAIKAFNRIREKN-----VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
A F + + V++W T++ ++G + + M++ G++P+ T S
Sbjct: 218 DAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASA 277
Query: 283 SSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SH 339
C + L +G ++H+ +K A+N V ++++ +Y V A+++FD + H
Sbjct: 278 LPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGH 337
Query: 340 VNLVTWNAMIAGHAQM-MDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTI 397
L WNAM+ G+AQ MD EAL +F+++ + +G+ P T + +L
Sbjct: 338 RQLGLWNAMVCGYAQAGMD------------EEALELFARMEAEAGVVPSETTIAGVLPA 385
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+R E +H LK G + V AL+++Y + G +E A +F + R ++SW
Sbjct: 386 CARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSW 445
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAG------------------VRPNQVTFVGALAAC 499
++ITG H A QL +M G V PN VT + L C
Sbjct: 446 NTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGC 505
Query: 500 SNAGMVYEALGYFEMMQKE---YKIKPVMDHYM----CLIDMFVRLGCI---EEAFDFIK 549
A + A G KE Y ++ +D + L+DM+ + GC+ FD +
Sbjct: 506 --AMLAAPAKG------KEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLP 557
Query: 550 KMDFEPNEVIWSVFIAGCRRHG 571
K N + W+V I HG
Sbjct: 558 KR----NVITWNVLIMAYGMHG 575
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 208/421 (49%), Gaps = 35/421 (8%)
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD--TSVGNSLCSLYSTCGSLNSAIKA 232
+ L A + ++L S+ + IH ++ +V N+L + Y+ CG L +A+
Sbjct: 59 HFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALAL 118
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML-S 291
FN + ++ +++ ++I A + L ML EG + FTL S+ C +
Sbjct: 119 FNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAED 178
Query: 292 LRVGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN-----LVT 344
LR+G + H+ +K G+ N+++ +Y + GLVD+AQ LF + + +VT
Sbjct: 179 LRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVT 238
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN M++ Q S G EA+ + + + G++PD TF+S L CS+L L
Sbjct: 239 WNTMVSLLVQ---------SGRCG--EAIEVIYDMVARGVRPDGITFASALPACSQLEML 287
Query: 405 EQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMI 461
G ++HA LK L ++ V +ALV+MY R+ A RVF V R L W +M+
Sbjct: 288 SLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMV 347
Query: 462 TGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVY--EAL-GYFEMMQK 517
G+A + +AL+LF M AGV P++ T G L AC+ + EA+ GY ++++
Sbjct: 348 CGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGY--VLKR 405
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELG 576
P + + L+D++ RLG +E A + EP +V+ W+ I GC G++
Sbjct: 406 GMADNPFVQN--ALMDLYARLGDMEAARWIFAAI--EPRDVVSWNTLITGCVVQGHIHDA 461
Query: 577 F 577
F
Sbjct: 462 F 462
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/734 (31%), Positives = 372/734 (50%), Gaps = 88/734 (11%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI-VKTGSHQDFFVMTFLVN 117
+A+ +L Y L+ C A+ + +H+ + +D F+ L++
Sbjct: 7 LHQAIDLLYSHGLASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLH 66
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ------------------------- 152
+Y K G + +AQ VFDN+ + +V SW +L+S Y +
Sbjct: 67 LYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTL 126
Query: 153 ------NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
N A+ V + M E G PT + AL ACS L +R GKQIH +V
Sbjct: 127 IACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADL 186
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
++T V N++ +Y+ CG ++ A F+ + +KNV+SW +I + G + + F++
Sbjct: 187 GENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNE 246
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M G++P+ L ++S+V Y +CG
Sbjct: 247 MQLSGLKPD---LVTVSNVLNA--------------------------------YFRCGR 271
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMK 385
VD+A+ LF + + + W MI G+AQ NG E A +F + +K
Sbjct: 272 VDDARNLFIKLPKKDEICWTTMIVGYAQ------------NGREEDAWMLFGDMLRRNVK 319
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
PD YT SS+++ C++L +L G+ +H + G + ++V +ALV+MY KCG A +
Sbjct: 320 PDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVI 379
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F M R +I+W +MI G+A + +AL L+E M +P+ +TFVG L+AC NA MV
Sbjct: 380 FETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMV 439
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
E YF+ + E+ I P +DHY C+I + R G +++A D I+ M EPN IWS ++
Sbjct: 440 KEGQKYFDSIS-EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLS 498
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
C + G+++ AA L +L P++ Y ML +++ + GRW+DVAVV++L +E+ +
Sbjct: 499 VCAK-GDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKF 557
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL----TDEE 681
+SW+ + +KV+ F D HP+ +I+ L+ L+ + GY + L +E+
Sbjct: 558 AAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHNVGEEEK 617
Query: 682 SASV-YHSEKLAIAFGLLNTPI-VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
S+ YHSEKLA+AF L+ P V+PI ++K+ +C DCH F+K + +R II+RDS
Sbjct: 618 FRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITISRPIIMRDSN 677
Query: 740 RLHKFVNGHCTCRD 753
R H F G C+C D
Sbjct: 678 RFHHFFGGKCSCND 691
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/570 (36%), Positives = 331/570 (58%), Gaps = 17/570 (2%)
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
S+ G+QIHA+++K + V + L + YS + + F K+ +W++VI
Sbjct: 69 SLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVIS 128
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ +N E V +++F +M+ E + P++ S + C + VG VH L IK GY
Sbjct: 129 SFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V +S++ +Y KCG + EA+ +FD M H N+V+W+ MI G+ Q L H
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQ--------LGEHE-- 238
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ +F + G+ + +T SS++ +C LE G+QIH L KT + VG++L
Sbjct: 239 -EAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSL 297
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y KCG IE A RVF E+ + L W +M+ A H+ + +A LF M AG+RPN
Sbjct: 298 ISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNF 357
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TF+ L ACS+AG+V E YF +M+K Y+I+P HY ++D+ R G ++EA IK
Sbjct: 358 ITFLCVLYACSHAGLVEEGKKYFALMKK-YEIEPGTQHYASMVDLLGRAGKLQEALSVIK 416
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M EP E +W FI GCR HGN +L +AA+++ +L + ML + + +AGR+ED
Sbjct: 417 GMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYED 476
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
A + + R+ + + SWI ++V+ F D H + EI++ L++L E+ + GY
Sbjct: 477 AAKARKMLRDRGVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGY 536
Query: 670 KQQESFEL----TDEESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
SF L ++E++ ++ YHSE+LAIAFGL++ P+ PI ++K+ +C DCHN IK
Sbjct: 537 VADTSFVLREVGSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKF 596
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ L+ R IIVRD+ R H+F +G C+C D+
Sbjct: 597 ISKLSGRVIIVRDNNRFHRFEDGKCSCADY 626
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 225/448 (50%), Gaps = 30/448 (6%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL +SL + IHAHI+K+G V +L+N Y K + +VF+ R +
Sbjct: 60 LLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKS 119
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+W+S+IS + QN +P LAI F M+ P + +A AC+ L +GK +H
Sbjct: 120 STTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHC 179
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V+K + D VG+SL +Y+ CG + A F+ + +NV+SW+ +I + GE +
Sbjct: 180 LVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEE 239
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
+R F + L EG+ N+FTL+S+ VCG+ L +G Q+H L K Y + V +S++
Sbjct: 240 AMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLIS 299
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
LY KCGL++ A ++FD + NL WNAM+ AQ H EA +F+K+
Sbjct: 300 LYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQ-----------HAHTKEAFDLFTKM 348
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
++GM+P+ TF +L CS +E+G++ AL K ++V++ + G++
Sbjct: 349 ENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGKL 408
Query: 440 ERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A V M T S W + ITG H + LA ++V +GA+++
Sbjct: 409 QEALSVIKGMPTEPTESVWGAFITGCRIHG----------NTDLAAFAADKVFELGAVSS 458
Query: 499 -----CSNAGMVYEALGYFEMMQKEYKI 521
SNA Y A G +E K K+
Sbjct: 459 GLHVMLSNA---YAAAGRYEDAAKARKM 483
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 46 QLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
QL + E +R F+EAL EG V + S+++ C + L + IH KT
Sbjct: 233 QLGEHEEAMRL--FKEAL---LEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSY 287
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
FV + L+++Y KCG +E A +VFD +P N+ W +++ Q++ + A +F
Sbjct: 288 DLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTK 347
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M AG P +T L ACS + GK+ A + KY+ E T S+ L G
Sbjct: 348 MENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGK 407
Query: 226 LNSAIKAFNRIREKNVMS-WTTVIGACGENG 255
L A+ + + S W I C +G
Sbjct: 408 LQEALSVIKGMPTEPTESVWGAFITGCRIHG 438
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/636 (34%), Positives = 355/636 (55%), Gaps = 29/636 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + +V SW S+I+ ++ A+ F M + YPT + A+ ACSSL I G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 195 KQIH--AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQ H A+V YQ+ D V ++L +YSTCG L A K F+ I +++++SWT++I
Sbjct: 96 KQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYD 153
Query: 253 ENGEAVQGLRFFSKML------SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
NG A+ + F +L + + + L S+ S C + + + +HS IK G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 307 YASNLRVRNSIMYLYLKCGL--VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+ + V N+++ Y K G V A+K+FD + + V++N++++ +AQ
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ---------- 263
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA +F +L + + + T S++L S AL G+ IH ++ G DV
Sbjct: 264 -SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+VGT++++MY KCGR+E A + F M + + SWT+MI G+ H + +AL+LF M+ +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GVRPN +TFV LAACS+AG+ E +F M+ + ++P ++HY C++D+ R G +++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+D I++M +P+ +IWS +A CR H N+EL + +L +L +C Y +L I+
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AGRW+DV V+ + + L + +S + + +V+ F D HPQ +I++ L EL K
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 664 AKCFGYKQQES--FELTDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY S DEE + HSEKLAIAFG++NT S + VVK+ +C DC
Sbjct: 563 LLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
HN IK+I+ + RE +VRD+KR H F +G C+C D+
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDY 658
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 229/469 (48%), Gaps = 31/469 (6%)
Query: 14 LETKSRQPSSSLATL----KDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEG 69
L T+ +L TL DK S+ + L + ++E + + LS+
Sbjct: 17 LHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP-- 74
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
SS+ ++ C + + + + H G D FV + L+ +Y CG +E+A+
Sbjct: 75 ---TRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN------YPTNVTLGTALT 183
KVFD +P+ ++VSWTS+I GY N A+ +F D+L N + ++ L + ++
Sbjct: 132 KVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVIS 191
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI--KAFNRIREKNV 241
ACS + + L + IH++V+K + SVGN+L Y+ G A+ K F++I +K+
Sbjct: 192 ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHS 300
+S+ +++ ++G + + F +++ + N TL+++ +LR+G +H
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
I++G ++ V SI+ +Y KCG V+ A+K FD M + N+ +W AMIAG+
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM------ 365
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL-VALEQGEQIHALTLKTGF 419
H +AL +F + SG++P+ TF S+L CS + +E +A+ + G
Sbjct: 366 -----HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV 420
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ +V++ + G +++A + M + I W+S++ H
Sbjct: 421 EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 180/372 (48%), Gaps = 42/372 (11%)
Query: 233 FNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FNR +K +V SW +VI +G++ + L FS M + P + C ++
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G Q H GY S++ V ++++ +Y CG +++A+K+FD + ++V+W +MI G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRG 151
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKL------NSSGMKPDLYTFSSILTICSRLVALE 405
+ DL+ + +A+S+F L + M D S+++ CSR+ A
Sbjct: 152 Y---------DLNGN--ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR--IERASRVFVEMSTRTLISWTSMITG 463
E IH+ +K GF V VG L++ Y K G + A ++F ++ + +S+ S+++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 464 FANHSLSHQALQLFEDMLLAGVRP-NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A +S++A ++F ++ V N +T L A S++G AL + + +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG----ALRIGKCIHDQVIRM 316
Query: 523 PVMDHYMC---LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ D + +IDM+ + G +E +AFD +K + W+ IAG HG+
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGMHGH---- 368
Query: 577 FYAAEQLLKLKP 588
A + L+L P
Sbjct: 369 ---AAKALELFP 377
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/671 (32%), Positives = 363/671 (54%), Gaps = 22/671 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
LS + +HA +V+ D L+ +Y KCG + A++VFD +P N VS L+SG
Sbjct: 32 LSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y + + A L +L ++ N L +A+ A + + S +G+Q H Y +K +
Sbjct: 91 YASSGRHRDA----LALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAE 146
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V +++ +Y C ++ A+K F+ + NV ++ ++I + G+ M+
Sbjct: 147 HPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMV 206
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
Q + + ++ C + + +G+QVH+ +K N+ V ++++ +Y KC
Sbjct: 207 RNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPH 266
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
EA ++F+ + N+V+W A++ + Q +L +D AL +F + G++P+
Sbjct: 267 EANRVFEVLPEKNIVSWTAIMTAYTQN-ELFED----------ALQLFLDMEMEGVRPNE 315
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+T++ L C+ L L+ G + A T+KTG + V AL+NMY K G +E A RVF+
Sbjct: 316 FTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLS 375
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M R ++SW S+I G+A+H + +A++ F DML A P+ VTF+G L+AC+ G+V E
Sbjct: 376 MPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 435
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
Y +M KE +KP +HY C++ + R+G ++EA FI+ + V W ++ C+
Sbjct: 436 FYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQ 495
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ N LG AEQ+ +LKPKD +Y +L +++ A RW+ V V+ L RE + +
Sbjct: 496 VYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGV 555
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
SWI++ +V+ F D HP +I K L EL++K K GY + L D +E
Sbjct: 556 SWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEH 615
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+YHSEKLA+AFGL+ TP I ++K+ +C DCH IK+I+ T R I+VRD+ R H
Sbjct: 616 LMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHC 675
Query: 744 FVNGHCTCRDF 754
+G C+C D+
Sbjct: 676 IEDGVCSCDDY 686
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F++AL + EG + +Y L C +L N + A +KTG V
Sbjct: 296 FEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNA 355
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y K G++E+A++VF ++P +VVSW S+I GY + + A+ F DML A P+
Sbjct: 356 LMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPS 415
Query: 175 NVTLGTALTACSSLESIR-----LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
VT L+AC+ L + L + VK E T + LC + G L+ A
Sbjct: 416 YVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRV----GRLDEA 471
Query: 230 IKAFNRIREKN-----VMSWTTVIGAC 251
R E N V++W +++ +C
Sbjct: 472 ----ERFIESNCIGTDVVAWRSLLSSC 494
>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
Length = 913
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/711 (30%), Positives = 365/711 (51%), Gaps = 37/711 (5%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P + LL+ SL +H + K G D + L+++Y KCG ++ A
Sbjct: 213 PMERRKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAG 272
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSL 188
+VF + NVVSWT+L+ G++Q+ + + +M A P TL +L AC
Sbjct: 273 EVFGGMRDRNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVT 332
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTV 247
E + G IH V+ E+ V +SL LYS G + A + F+ + + +W +
Sbjct: 333 EDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAM 392
Query: 248 IGACGENGEAVQGLRFFSKML------SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
I G L F +M + QP+EFT S+ CG + + R GAQVH+
Sbjct: 393 ISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAA 452
Query: 302 GIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
G+ ASN + +++ +Y+KCG + A ++F+ + N + W ++ GHAQ +
Sbjct: 453 MAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQV- 511
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
EAL +F + SG + D + SSI+ + + +EQG Q+H +K+
Sbjct: 512 ----------MEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPA 561
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+DV G ++V+MY KCG + A R+F E+ R ++SWT+MI G H L +A+ +FE+
Sbjct: 562 GTDVSAGNSIVDMYLKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEE 621
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M GV P++VT++ L+ACS+AG+V E YF ++++ ++P +HY C++D+ R G
Sbjct: 622 MRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAG 681
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+ EA D I+ M EP +W ++ CR H ++ +G A + LL + + +Y L +
Sbjct: 682 ELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSN 741
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF--KPNDGLHPQSAEIFKVL 657
+F AG W + V++ R L + SW+ I +V+ F ++ HPQ+ +I +VL
Sbjct: 742 VFAEAGAWRECHKVRDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVL 801
Query: 658 DELVEKAK-CFGY---KQQESFELTDEESAS---VYHSEKLAIAFGLLNTPI-------V 703
++ + + GY Q + DEES + HSE+LA+ LL +
Sbjct: 802 RDVETRVREQLGYCADDVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHR 861
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V K+ +C DCH F K ++++ R ++VRD+ R H+F +G C+C+D+
Sbjct: 862 QPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDY 912
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/769 (31%), Positives = 387/769 (50%), Gaps = 105/769 (13%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
S A +HAHI+ +G ++ L++ Y K N+ A+ +FD +P+ ++V+ T+++S Y
Sbjct: 13 SFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAY 72
Query: 151 -----------VQNSQP----------------------ELAIHVFLDMLEAGNYPTNVT 177
+ N+ P A+ +F+ M G P T
Sbjct: 73 SAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDPFT 132
Query: 178 LGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS---------LN 227
+ L A S + +Q+H V K+ SV N+L S Y +C S +
Sbjct: 133 FSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVLMA 192
Query: 228 SAIKAFNRIR--EKNVMSWTTVIGACGENGEAV--------------------------- 258
+A K F+ ++ +WTT+I N + V
Sbjct: 193 AARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISGYVHR 252
Query: 259 ----QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN---- 310
+ +M S GIQ +E+T TS+ S +G QVH+ ++ +
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV 312
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLS---- 364
L V N+++ LY +CG + EA+++FD M +LV+WNA+++G +A+ ++ A
Sbjct: 313 LSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPV 372
Query: 365 -------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
A NG G E L +F+++ G++P Y ++ + CS L +L+ G+Q+
Sbjct: 373 RSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQL 432
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H+ ++ G S + VG AL+ MY +CG +E A VF+ M +SW +MI A H
Sbjct: 433 HSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHG 492
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
QA+QL+E ML + P+++TF+ L+ACS+AG+V E YF+ M+ Y I P DHY
Sbjct: 493 VQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSR 552
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
LID+ R G EA + + M FEP IW +AGC HGNMELG AA++LL+L P+
Sbjct: 553 LIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQ 612
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y L +++ + G+W++VA V+ L RE + + SWI +++ V+ F +D +HP+
Sbjct: 613 DGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEV 672
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTDEES-----ASVYHSEKLAIAFGLLNTPIVSP 705
+++ L++LV + + GY F L D ES A HSEKLA+ +G++ P+ +
Sbjct: 673 HAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGAT 732
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCHN K I+ + REIIVRD KR H F NG C+C ++
Sbjct: 733 IRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNY 781
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 151/334 (45%), Gaps = 41/334 (12%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT----GSHQDFF 110
++EA +L G ++ +Y S++ N + +HA++++T H
Sbjct: 255 YEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLS 314
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVS---------------------------- 142
V L+ +Y +CG + EA++VFD +P ++VS
Sbjct: 315 VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPVRS 374
Query: 143 ---WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
WT +ISG QN E + +F M G P + A+ +CS L S+ G+Q+H+
Sbjct: 375 LLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHS 434
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+++ + SVGN+L ++YS CG + +A F + + +SW +I A ++G VQ
Sbjct: 435 QIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQ 494
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIM 318
++ + KML E I P+ T +I S C ++ G ++ + G + ++
Sbjct: 495 AIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLI 554
Query: 319 YLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
L + G+ EA+ + + M W A++AG
Sbjct: 555 DLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAG 588
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 108/257 (42%), Gaps = 21/257 (8%)
Query: 53 PVRSL-------------GF-QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAE 94
PVRSL GF +E L + EG + +Y + C SL N +
Sbjct: 371 PVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQ 430
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+H+ I++ G V L+ +Y +CG +E A VF +P ++ VSW ++I+ Q+
Sbjct: 431 QLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHG 490
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ-IHAYVVKYQTEDDTSVG 213
AI ++ ML+ P +T T L+ACS ++ G+ V Y +
Sbjct: 491 HGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHY 550
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
+ L L G + A + E W ++ C +G G++ ++L E +
Sbjct: 551 SRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLL-ELM 609
Query: 273 QPNEFTLTSISSVCGTM 289
+ T S+S++ +
Sbjct: 610 PQQDGTYISLSNMYAAL 626
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/705 (31%), Positives = 371/705 (52%), Gaps = 25/705 (3%)
Query: 61 EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL++ + G + + + V++LQ C LS +HA ++K GS + LV
Sbjct: 250 EALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLV 309
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y K G ++ A +VF + + +SW S++S YVQNS AI F +ML+ G P +
Sbjct: 310 -MYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHA 368
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + +A L + G++ HAY +K + D VGN+L +Y CGS+ + K F +
Sbjct: 369 CVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESM 428
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++ +SWTT++ ++ + L ++ EGI + + SI C + S+ +
Sbjct: 429 GIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLK 488
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
QVH I+ G +L + N ++ +Y +CG D + LF + ++V+W +MI
Sbjct: 489 QVHCYAIRNGLL-DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMI------- 540
Query: 357 DLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ +NG A+ +F+++ + ++PD SIL + L +L +G+Q+H +
Sbjct: 541 -----NCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLI 595
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ F + V ++LV+MY CG + A RVF + ++ WT+MI H QA+
Sbjct: 596 RRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAID 655
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF+ ML G+ P+ V+F+ L ACS++ +V E Y ++M +Y++KP +HY C++D+
Sbjct: 656 LFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDIL 715
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G EEA++FIK M +P +W + CR H N L AA +LL+L+P + +Y
Sbjct: 716 GRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYI 775
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ ++F G+W + + E L + SWI I + +++F D H S I
Sbjct: 776 LVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHL 835
Query: 656 VLDELVEKAKC-FGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVV 709
L E+ E + GY + F L D EE + HSE++AIAFGL++T PI +
Sbjct: 836 KLSEITEMLRREGGYVEDTRFVLHDTSEEEKIDMLHKHSERIAIAFGLISTRPGMPIRIA 895
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH F K+++ L R+I+VRD+ R H F G C+C DF
Sbjct: 896 KNLRVCGDCHEFTKLVSKLFERDIVVRDANRFHHFSGGSCSCEDF 940
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/557 (26%), Positives = 278/557 (49%), Gaps = 35/557 (6%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS---HQDFFVMTFL 115
++AL LT Y +L R++ + +HAH V TGS D F+ T L
Sbjct: 42 LRQALRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGSLNEDDDGFLATKL 101
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA---GNY 172
V +YG+CG +++A+++F+ +P V SW +L+ Y+ + A+ V+ M + G+
Sbjct: 102 VFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRVYGAMRASAAPGSA 161
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P TL + L AC + R G ++H VK + T V N+L +Y+ CG L+SA++
Sbjct: 162 PDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRV 221
Query: 233 FNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F +++ ++V SW +V+ C +NG ++ L F M S G N +T ++ VC +
Sbjct: 222 FEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELG 281
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L +G ++H+ +K G N++ N+++ +Y K G VD A ++F ++ + ++WN+M++
Sbjct: 282 LLSLGRELHAALLKCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLS 340
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ Q A EA+ F ++ G +PD S+ + L L G +
Sbjct: 341 CYVQNSFYA-----------EAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREF 389
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA +K +D+ VG L++MY KCG IE +++VF M R ISWT+++ FA S
Sbjct: 390 HAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRH 449
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE--YKIK-PVMDH 527
+AL++ ++ G+ + + L C L ++++ Y I+ ++D
Sbjct: 450 SEALEMILELQKEGIMVDSMMIGSILETCC-------GLKSISLLKQVHCYAIRNGLLDL 502
Query: 528 YM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+ LID++ G + + + ++++ + + V W+ I C +G + + ++ K
Sbjct: 503 ILENRLIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMINCCTNNGRLNGAVFLFTEMQK 561
Query: 586 --LKPKDCESYAMLLDI 600
++P ++L+ I
Sbjct: 562 ANIQPDSVALVSILVAI 578
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/648 (33%), Positives = 346/648 (53%), Gaps = 49/648 (7%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ Y CG + +FD +P+ NVV + +I YV N A+ VF +M G P
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T L A S E + +G QIHA VV+ + + VGN L S+Y CG L A + +
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++V+SW +++ C NG+ L +M G++P+ GTM SL
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPD----------AGTMASL-- 1233
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
L +N + N V +++F +++ +LV+WN MIA +
Sbjct: 1234 ----------LPAVTNTCLDN-----------VSFVKEMFMKLANKSLVSWNVMIAVYMN 1272
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ EA+ IF ++ + PD + +S+L C L AL G +IH
Sbjct: 1273 -----------NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYV 1321
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++ ++++ AL++MY KCG +E A VF +M R ++SWTSMI+ + + A+
Sbjct: 1322 VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAV 1381
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF M G+ P+ + FV L+ACS+AG++ E YF++M +E KI P ++H++C++D+
Sbjct: 1382 SLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDL 1441
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++EA+ FIK+M EPNE +W ++ CR + NM +G AA+QL +L P+ Y
Sbjct: 1442 LGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYY 1501
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ AGRWEDV V+++ + + + + S + ++V++F D HPQS +I+
Sbjct: 1502 VLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIY 1561
Query: 655 KVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVV 709
+ LD LV K K GY + E D+E HSEKLAIAF +LNT SPI +
Sbjct: 1562 EELDVLVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRIT 1621
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFGVS 757
K+ +C DCH K+I+ + REI +RD+ R H F NG C+C D+ S
Sbjct: 1622 KNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYWYS 1669
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 171/357 (47%), Gaps = 49/357 (13%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA +V+ G + FV L+++YGKCG + EA +V D +P +VVSW SL++G +N Q
Sbjct: 1148 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQ 1207
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ A+ V +M G P T+ + L A +
Sbjct: 1208 FDDALEVCKEMELLGLKPDAGTMASLLPAVT----------------------------- 1238
Query: 216 LCSLYSTCGSLNSAIKA-FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+TC S +K F ++ K+++SW +I N + + F +M + P
Sbjct: 1239 -----NTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 1293
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ ++ S+ CG + +L +G ++H ++ NL + N+++ +Y KCG ++ A+++F
Sbjct: 1294 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 1353
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSS 393
D M ++V+W +MI+ + NG G +A+S+FS++ G+ PD F S
Sbjct: 1354 DQMKFRDVVSWTSMISAYGM------------NGKGRDAVSLFSRMQDLGLNPDSIAFVS 1401
Query: 394 ILTICSRLVALEQGEQIHAL-TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+L+ CS L++G L T + + + +V++ + G+++ A +M
Sbjct: 1402 VLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQM 1458
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 181/402 (45%), Gaps = 51/402 (12%)
Query: 191 IRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
I+ K++H+ + + + + S+G L Y+ CG S F+ I +KNV+ + +I
Sbjct: 1040 IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIR 1099
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ N L F M GI P+ +T + L VG Q+H+ +++G
Sbjct: 1100 SYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDL 1159
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N+ V N ++ +Y KCG + EA ++ D M ++V+WN+++AG A NG
Sbjct: 1160 NVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAG------------CARNGQ 1207
Query: 370 -TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL + ++ G+KPD T +S+L V T
Sbjct: 1208 FDDALEVCKEMELLGLKPDAGTMASLLP--------------------------AVTNTC 1241
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L N + +F++++ ++L+SW MI + N+S+ +A+ +F M V P+
Sbjct: 1242 LDN-------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPD 1294
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++ L AC + + E + ++ +++P + LIDM+ + GC+E A +
Sbjct: 1295 AISIASVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYAREVF 1353
Query: 549 KKMDFEPNEVIWSVFIA--GCRRHGNMELGFYAAEQLLKLKP 588
+M F + V W+ I+ G G + ++ Q L L P
Sbjct: 1354 DQMKFR-DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNP 1394
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S S+L C + +L IH ++V+ + + L+++Y KCG +E A++VFD +
Sbjct: 1297 SIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 1356
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSWTS+IS Y N + A+ +F M + G P ++ + L+ACS + G+
Sbjct: 1357 KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 1416
Query: 196 QIHAYVVKYQTEDDTSVGN-----SLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIG 249
Y K TE+ V + L G ++ A ++ E N W ++
Sbjct: 1417 ----YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS 1472
Query: 250 ACGENGEAVQGL 261
AC + GL
Sbjct: 1473 ACRVYSNMIIGL 1484
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/723 (31%), Positives = 386/723 (53%), Gaps = 56/723 (7%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM---------- 125
++ LL + V + L + +HA VK+ ++ VN+Y KCG +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 126 EE---------------------AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
EE A+++FD +P+ + VS+ +LISGY + A+ +F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
M + G TL + AC + + L KQ+H + V + +SV N+ + YS G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 225 SLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
L A+ F + E ++ +SW ++I A G++ E + L + +M+ +G + + FTL S+
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD---EAQKLFDGMSHV 340
+ ++ L G Q H IK G+ N V + ++ Y KCG D +++K+F +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+LV WN MI+G++ +L++ EA+ F ++ G +PD +F + + CS
Sbjct: 308 DLVVWNTMISGYSMNEELSE----------EAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 401 LVALEQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L + Q +QIH L +K+ S+ + V AL+++Y K G ++ A VF M +S+
Sbjct: 358 LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNC 417
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
MI G+A H +AL L++ ML +G+ PN++TFV L+AC++ G V E YF M++ +
Sbjct: 418 MIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETF 477
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
KI+P +HY C+ID+ R G +EEA FI M ++P V W+ + CR+H NM L A
Sbjct: 478 KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERA 537
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
A +L+ ++P Y ML +++ A +WE++A V+ R +++ + SWI +K K +
Sbjct: 538 ANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV--------YHSEKL 691
F D HP E+ + L+E+++K K GY + + + E+ A +HSEKL
Sbjct: 598 FVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKL 657
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A+AFGL++T ++VVK+ +C DCHN IK ++++ REIIVRD+ R H F +G C+C
Sbjct: 658 AVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSC 717
Query: 752 RDF 754
D+
Sbjct: 718 GDY 720
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 158/332 (47%), Gaps = 9/332 (2%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
S ++ + E ++L + + + +G K+ + S+L + L H ++
Sbjct: 210 SMIVAYGQHKEGAKALALYKEM--IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 102 KTGSHQDFFVMTFLVNVYGKCG---NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PE 157
K G HQ+ V + L++ Y KCG M +++KVF + ++V W ++ISGY N + E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSL 216
A+ F M G+ P + + +ACS+L S KQIH +K + SV N+L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
SLY G+L A F+R+ E N +S+ +I ++G + L + +ML GI PN+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 277 FTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T ++ S C + G + +++ + ++ L + G ++EA++ D
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 336 GMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAH 366
M + V W A++ + ++A + +A+
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 231/722 (31%), Positives = 382/722 (52%), Gaps = 59/722 (8%)
Query: 76 SYVSLLQECVNR-KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+YV++L C + +HA +KT FV LV++Y K + A K+F+
Sbjct: 166 TYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQ 225
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRL 193
+PR ++ SW ++IS +Q+S + A +F +M + + TL LTA +SL
Sbjct: 226 IPRRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASLME--- 282
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL--------------------------- 226
G+Q+HA+ VK E D +VGN L YS G++
Sbjct: 283 GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYME 342
Query: 227 ----NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
N A+K F+ + EKN +S+ TV+ N + + +R F +M+ EG++ +F+LTS+
Sbjct: 343 FGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSV 402
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG--MSHV 340
CG + +V QVH +K G+ SN V +++ +Y +CG + +A K+F +
Sbjct: 403 VDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEF 462
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSG-MKPDLYTFSSILTIC 398
+ V W AMI G+A+ NG E A+ +F S G + D +S+L +C
Sbjct: 463 SSVVWTAMICGYAR------------NGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLC 510
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ L+ G+QIH +K G ++ VG A+V+MY KCG ++ A +VF +M +++W
Sbjct: 511 GTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWN 570
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--SNAGMVYEALGYFEMMQ 516
++I+G H +AL+++ +ML G++PNQVTFV ++A +N +V + F M+
Sbjct: 571 TLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMR 630
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
Y+I+P HY I + G ++EA + I M F+P+ ++W V + GCR H N +G
Sbjct: 631 TVYQIEPTSRHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIG 690
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
+AA+ +L L+PKD ++ ++ +++ ++GRW+ +V+ RE+ + SWI + K
Sbjct: 691 KWAAQNILALEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVCEKK 750
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKL 691
+ SF P D HPQ +I + L+ L+ + GY+ SF L + E +HS KL
Sbjct: 751 INSFYPRDRSHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEVEEHHKKIFLFHHSAKL 810
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A +G+L T PI +VK+ +C DCH F+K + +T R+I +RDS H F NG C+C
Sbjct: 811 AATYGILMTKPGKPIRIVKNILLCGDCHAFLKYASIVTKRDIFLRDSSGFHCFSNGQCSC 870
Query: 752 RD 753
+D
Sbjct: 871 KD 872
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/529 (27%), Positives = 267/529 (50%), Gaps = 45/529 (8%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A+ +HA ++K +D + L++ Y K A ++F +LP NVVS+T+LIS ++
Sbjct: 83 AKTVHATLLKR-DEEDTHLSNALISTYLKLNLFPHALRLFLSLPSPNVVSYTTLIS-FLS 140
Query: 153 NSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSS-LESIRLGKQIHAYVVKYQTEDDT 210
+ A+H+FL M + P N T LTACSS L G Q+HA +K D
Sbjct: 141 KHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHFGLQLHAAALKTAHFDSP 200
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM-LS 269
V N+L SLY+ S ++A+K FN+I +++ SW T+I A ++ R F M +
Sbjct: 201 FVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQDSLYDTAFRLFRNMQAT 260
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+ + ++FTL+ + + +++ G QVH+ +KLG ++L V N ++ Y K G VD+
Sbjct: 261 DAFRVDDFTLSILLTASASLME---GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDD 317
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAK---DDLSAHNG---------------G 369
+ LF+GM +++TW M+ + + +++LA D++ N G
Sbjct: 318 VEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQG 377
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ +F ++ G++ ++ +S++ C L + +Q+H +K GF S+ V AL
Sbjct: 378 FEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAAL 437
Query: 430 VNMYKKCGRIERASRVFV--EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++MY +CGR+ A ++F+ E+ + + WT+MI G+A + +A+ LF G R
Sbjct: 438 LDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFH----VG-RS 492
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKE--YKIKPVMDHYM----CLIDMFVRLGCI 541
+ + +AA S G+ +G+ +M ++ + IK + + ++ M+ + G +
Sbjct: 493 DGKVIMDEVAAASMLGLC-GTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSV 551
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAG--CRRHGNMELGFYAAEQLLKLKP 588
++A M + V W+ I+G R G+ L + +KP
Sbjct: 552 DDAMKVFGDMPCT-DIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKP 599
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 202/444 (45%), Gaps = 58/444 (13%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P + +L AL S L K +HA ++K + E+DT + N+L S Y A++
Sbjct: 62 PESHSLLHALHVSSRSGDTHLAKTVHATLLK-RDEEDTHLSNALISTYLKLNLFPHALRL 120
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTML- 290
F + NV+S+TT+I ++ + L F +M + + PNE+T ++ + C ++L
Sbjct: 121 FLSLPSPNVVSYTTLISFLSKHRQH-HALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLH 179
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
G Q+H+ +K + + V N+++ LY K A KLF+ + ++ +WN +I+
Sbjct: 180 HFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIIS 239
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQGEQ 409
A + D D A +F + ++ + D +T S +LT + L+ +G+Q
Sbjct: 240 --AALQDSLYD---------TAFRLFRNMQATDAFRVDDFTLSILLTASASLM---EGQQ 285
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+HA +K G +D+ VG L+ Y K G ++ +F M R +I+WT M+T + L
Sbjct: 286 VHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGL 345
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE----------- 518
+ AL++F++M N V++ LA +EA+ F M +E
Sbjct: 346 VNLALKVFDEM----PEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTS 401
Query: 519 ----------YKIKPVMDHY-------------MCLIDMFVRLGCIEEAFDFIKKMDFEP 555
YK+ + + L+DM+ R G + +A + + E
Sbjct: 402 VVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEE 461
Query: 556 -NEVIWSVFIAGCRRHGNMELGFY 578
+ V+W+ I G R+G E Y
Sbjct: 462 FSSVVWTAMICGYARNGQPEEAIY 485
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 120/225 (53%), Gaps = 3/225 (1%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ ++ EG ++ S S++ C ++ +H VK G + +V L+++Y +C
Sbjct: 385 VRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRC 444
Query: 123 GNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLG 179
G M +A K+F L + V WT++I GY +N QPE AI++F G + V
Sbjct: 445 GRMVDAGKMFLRWELEEFSSVVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAA 504
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L C ++ + +GKQIH +V+K + VGN++ S+Y CGS++ A+K F +
Sbjct: 505 SMLGLCGTIGHLDMGKQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCT 564
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
++++W T+I + + + L + +ML EGI+PN+ T I S
Sbjct: 565 DIVTWNTLISGNLMHRQGDRALEIWVEMLGEGIKPNQVTFVLIIS 609
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/706 (31%), Positives = 375/706 (53%), Gaps = 36/706 (5%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
+R+ F+ A + E P+ S+ +++ V ++L A + + +D
Sbjct: 101 LRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERM----PERDVCSWN 156
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G +++A++VFD +P N VSW +L+S YVQNS+ E A +F
Sbjct: 157 TILSGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVS 216
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
N LG + +E+ + + D N++ + Y+ G ++ A + F
Sbjct: 217 WNCLLGGFVKKKKIVEARQFFDSMKV--------RDVVSWNTIITGYAQNGEIDEARQLF 268
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ +V +WT ++ +N + F +M + NE + ++ + G + R
Sbjct: 269 DESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNEVSWNAM--LAGYVQGER 322
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
V + N+ N+++ Y +CG + EA+ LFD M + V+W AMIAG++
Sbjct: 323 VEMAKELFDVMP--CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYS 380
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q S H+ EAL +F + G + + +FSS L+ C+ +VALE G+Q+H
Sbjct: 381 Q---------SGHS--YEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGR 429
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K G+ + VG AL+ MY KCG IE A+ +F EM+ + ++SW +MI G++ H +A
Sbjct: 430 LVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEA 489
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L+ FE M G++P+ T V L+ACS+ G+V + YF M ++Y ++P HY C++D
Sbjct: 490 LRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVD 549
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +EEA + +K M FEP+ IW + R HGN EL AA+++ ++P++
Sbjct: 550 LLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGM 609
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +L +++ S+GRW DV ++ R++ + + +SWI I++K ++F D HP+ EI
Sbjct: 610 YVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEI 669
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILV 708
F L++L + K GY + S L D +E YHSE+LA+A+G++ PI V
Sbjct: 670 FAFLEDLDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRV 729
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+ +C DCHN IK + +T R II+RD+ R H F +G C+C D+
Sbjct: 730 IKNLRVCEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDY 775
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 147/319 (46%), Gaps = 43/319 (13%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ YL+ G + A+ LFD M +LV+WN MI G+ + +L K A
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGK-----------ARE 142
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ D+ ++++IL+ ++ ++ ++ + + V AL++ Y
Sbjct: 143 LFERMPER----DVCSWNTILSGYAQNGCVDDARRVFDRMPE----KNDVSWNALLSAYV 194
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
+ ++E A +F L+SW ++ GF +A Q F+ M + V V++
Sbjct: 195 QNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDV----VSWNT 250
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMD 552
+ + G + EA F+ PV D + ++ +++ +EEA + +M
Sbjct: 251 IITGYAQNGEIDEARQLFDE-------SPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP 303
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVA 611
E NEV W+ +AG + +E+ A++L + P ++ ++ ++ + G+ ++
Sbjct: 304 -ERNEVSWNAMLAGYVQGERVEM----AKELFDVMPCRNVSTWNTMITGYAQCGK---IS 355
Query: 612 VVKNLTREEKLSETDDWSW 630
KNL +K+ + D SW
Sbjct: 356 EAKNLF--DKMPKRDPVSW 372
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
SD+ ++ Y + GR A RVF M + +S+ +MI+G+ + A LF++M
Sbjct: 57 SDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEM 116
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVRL 538
+ V G + N G E FE M P D + ++ + +
Sbjct: 117 PERDLVSWNVMIKGYVRN-RNLGKARE---LFERM-------PERDVCSWNTILSGYAQN 165
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
GC+++A +M E N+V W+ ++ ++ +E
Sbjct: 166 GCVDDARRVFDRMP-EKNDVSWNALLSAYVQNSKLE 200
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/705 (31%), Positives = 370/705 (52%), Gaps = 66/705 (9%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y L Q C R + + + I H++K G D ++ L+N+Y CGN+ +A+KVFD
Sbjct: 128 TYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGS 187
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+++VSW S+++GYV E A V+ M
Sbjct: 188 SVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM----------------------------- 218
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
E + NS+ L+ G++ A K FN +++K+++SW+ +I +N
Sbjct: 219 ----------PERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNE 268
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L F +M + GI +E + S+ S C +L + G VH L +K+G + + ++N
Sbjct: 269 MYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQN 328
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA-----------KDDLS 364
+++++Y C V AQKLF ++ ++WN+MI+G+ + ++ KD++S
Sbjct: 329 ALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVS 388
Query: 365 ---------AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ TE L +F ++ G KPD S+++ C+ L AL+QG+ IHA
Sbjct: 389 WSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIR 448
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K G ++++GT L+NMY K G +E A VF + + + +W ++I G A + L ++L+
Sbjct: 449 KNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLK 508
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
F +M GV PN++TFV L AC + G+V E +F M +E+KI P + HY C++D+
Sbjct: 509 TFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLL 568
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G ++EA + I+ M P+ W + C+++G+ E G +L++L P D + +
Sbjct: 569 GRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHP-DHDGFN 627
Query: 596 MLL-DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+LL +I+ S G W DV V+ + R+ + +T S I +V+ F D HPQ+ I
Sbjct: 628 VLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIE 687
Query: 655 KVLDELVEKAKCFGY---KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVV 709
+LDE+ +K K GY ++ S ++ +EE + HSEKLAIAFGL+ +PI +V
Sbjct: 688 HMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIV 747
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K+I+ REI+VRD R H F G C+C D+
Sbjct: 748 KNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDY 792
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 196/430 (45%), Gaps = 86/430 (20%)
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
++N + + F+ I N T++ + + + + ML + + +T +
Sbjct: 75 NINQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQ 134
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C L+ G + +K+G+ S++ ++N+++ +Y CG + +A+K+FDG S +++V+
Sbjct: 135 SCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVS 194
Query: 345 WNAMIAGHAQMMDL--AKD--------DLSAHN---------GGTE-------------- 371
WN+M+AG+ + ++ AKD ++ A N G E
Sbjct: 195 WNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDL 254
Query: 372 ------------------ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
AL +F ++N++G+ D S+L+ CSRL+ + G+ +H L
Sbjct: 255 VSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGL 314
Query: 414 TLKTGFLSDVVVGTALVNMYK-------------------------------KCGRIERA 442
+K G + V + AL++MY KCG IE+A
Sbjct: 315 VVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKA 374
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+F M + +SW++MI+G+A + L LF++M + G +P++ V ++AC++
Sbjct: 375 RALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHL 434
Query: 503 GMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+ + ++K KI ++ LI+M+++LGC+E+A + K ++ E W+
Sbjct: 435 AALDQGKWIHAYIRKNGLKINIILG--TTLINMYMKLGCVEDALEVFKGLE-EKGVSTWN 491
Query: 562 VFIAGCRRHG 571
I G +G
Sbjct: 492 ALILGLAMNG 501
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 141/289 (48%), Gaps = 14/289 (4%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
KV +YV+L ++ S + + D +++ Y KCG +E+A+
Sbjct: 317 KVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARA 376
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD++P + VSW+++ISGY Q + + +F +M G P L + ++AC+ L +
Sbjct: 377 LFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAA 436
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK IHAY+ K + + +G +L ++Y G + A++ F + EK V +W +I
Sbjct: 437 LDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILG 496
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-------AQVHSLGI 303
NG + L+ FS+M G+ PNE T ++ C M + G Q H +G
Sbjct: 497 LAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIG- 555
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAG 351
N++ ++ L + G++ EA++L + M ++ TW A++
Sbjct: 556 -----PNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 5/212 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
FQE + EG K + VS++ C + +L + IHA+I K G + + T L+N+
Sbjct: 409 FQE---MQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINM 465
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y K G +E+A +VF L V +W +LI G N + ++ F +M E G P +T
Sbjct: 466 YMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITF 525
Query: 179 GTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI- 236
L AC + + G + ++ + +++ + + L G L A + +
Sbjct: 526 VAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMP 585
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+V +W ++GAC + G+ G R K++
Sbjct: 586 MAPDVSTWGALLGACKKYGDNETGERIGRKLV 617
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 352/625 (56%), Gaps = 17/625 (2%)
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLE-AGNYPTNVTLGTALTACSSLESIRLG 194
P + S+ LI +++ PE A+H+F++ML+ P T+ + +CS + + +G
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ + AY K D V NSL +Y++CG + +A F+ ++ K V++W +I +N
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + + F ML +E TL S+++ CG + +G + + G + +
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KCG +D+A++LFD M ++V W+AMI+G+ Q + EAL+
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQ-----------SDRCREALA 359
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF+++ + + P+ T S+L+ C+ L ALE G+ +H+ + V++GTALV+ Y
Sbjct: 360 IFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYA 419
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I+ A + F M R +WT++I G A++ S +AL+LF ML A + P VTF+G
Sbjct: 420 KCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIG 479
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+ +V E +F M ++Y I P ++HY C++D+ R G I+EA+ FI+ M E
Sbjct: 480 VLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIE 539
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN V+W ++ C H N+E+G A +Q++ L P +Y +L + + S G+W++ A+V+
Sbjct: 540 PNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVR 599
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+E+ + + S I ++ ++ F D HPQ EI++ + E++E K GY +
Sbjct: 600 KEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTA 659
Query: 675 FELTD----EESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
D E+ SV +HSEKLAIAFGL+ + + I + K+ +C DCH+ K+I+ +
Sbjct: 660 DARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVY 719
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD R H F +G C+C D+
Sbjct: 720 NREIIVRDRNRFHHFKDGLCSCNDY 744
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 2/241 (0%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T LV++Y KCG +++A+++FD + +VV+W+++ISGY Q+ + A+ +F +M
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVN 370
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P +VT+ + L+AC+ L ++ GK +H+Y+ + +G +L Y+ CG + A+KA
Sbjct: 371 PNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKA 430
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F + +N +WT +I NG + + L FS ML I+P + T + C +
Sbjct: 431 FESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLV 490
Query: 293 RVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
G + S+ G + ++ L + GL+DEA + M N V W A+++
Sbjct: 491 EEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLS 550
Query: 351 G 351
Sbjct: 551 A 551
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/695 (30%), Positives = 385/695 (55%), Gaps = 35/695 (5%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SL+ C ++L +H H++ TG D + T L+ +Y KCG++++A++VF+ +
Sbjct: 15 SLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 74
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++ +W+S+IS Y + + E+A+ ++ M+ G P VT AL C+S+ + G+ IH
Sbjct: 75 DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 134
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++ + D + +SL ++Y C + A K F ++ +NV S+T +I A + GE
Sbjct: 135 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 194
Query: 259 QGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L FS+M E I+PN +T +I + +L G +VH G+ +N+ V+N++
Sbjct: 195 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 254
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y KCG EA+K+FD M+ N+++W +MIA +AQ H EAL++F
Sbjct: 255 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ-----------HGNPQEALNLFK 303
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+++ ++P +FSS L C+ L AL++G +IH ++ L+ + T+L++MY +CG
Sbjct: 304 RMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVE-AHLASPQMETSLLSMYARCG 359
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A RVF M TR S +MI F H QAL+++ M G+ + +TFV L
Sbjct: 360 SLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLV 419
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
ACS+ +V + +F+ + ++ + P+++HY+C++D+ R G + +A + ++ M ++ +
Sbjct: 420 ACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDA 479
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
V W ++GC+RHG++ G AA ++ +L P + Y L +++ +A R++D V+
Sbjct: 480 VAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEM 539
Query: 618 REEKLSETDDWSWIRIKDKVYSF------KPNDGLHPQSAE-IFKVLDELVEKAKCFGY- 669
E ++ S+I I ++++ F + +G ++ E + +L EL+E K GY
Sbjct: 540 EERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLELLEPMKQAGYV 599
Query: 670 --------KQQESFELTDEESASVYHSEKLAIAFGLL--NTPIVS-PILVVKSTTMCRDC 718
+QQ +++ + +HSE+LAIA+GL+ P S P+ VV S +C DC
Sbjct: 600 PDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSDC 659
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
H+ IK+++ + + I VRD R H F G C+C D
Sbjct: 660 HSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGD 694
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 203/387 (52%), Gaps = 17/387 (4%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M E G + + + AC+ L+++ G+++H +++ D + +L +Y+ CGS
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L+ A + F + K++ +W+++I A G + + +M++EG++PN T
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C ++ L G +H + + +++S++ +YLKC + EA+K+F+GM N+ ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVAL 404
AMI+ + Q + A EAL +FS+++ ++P+ YTF++IL L L
Sbjct: 181 TAMISAYVQAGEHA-----------EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNL 229
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
E+G ++H GF ++VVV ALV MY KCG A +VF M+ R +ISWTSMI +
Sbjct: 230 EKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAY 289
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H +AL LF+ M V P+ V+F AL AC+ G + E + + + P
Sbjct: 290 AQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQ 346
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKM 551
M+ L+ M+ R G +++A +M
Sbjct: 347 ME--TSLLSMYARCGSLDDARRVFNRM 371
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 208/408 (50%), Gaps = 22/408 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + ++ L C + L++ IH I+ + QD + L+N+Y KC
Sbjct: 102 MIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDE 161
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM--LEAGNYPTNVTLGTAL 182
M EA+KVF+ + NV S+T++IS YVQ + A+ +F M +EA P T T L
Sbjct: 162 MVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIE-PNAYTFATIL 220
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
A L ++ G+++H ++ + + V N+L ++Y CGS A K F+ + +NV+
Sbjct: 221 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 280
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT++I A ++G + L F +M ++P+ + +S + C + +L G ++H
Sbjct: 281 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 337
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++ AS ++ S++ +Y +CG +D+A+++F+ M + + NAMIA Q
Sbjct: 338 VEAHLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQ-------- 388
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR--LVALEQGEQIHALTLKTGFL 420
H +AL I+ ++ G+ D TF S+L CS LVA + + +L + G +
Sbjct: 389 ---HGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVA-DCRDFFQSLVMDHGVV 444
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
V +V++ + GR+ A + M +T ++W ++++G H
Sbjct: 445 PLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRH 492
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 159/312 (50%), Gaps = 11/312 (3%)
Query: 61 EALSVLTEGPKVQT-----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EAL + + KV+ ++ ++L +L +H H+ G + V L
Sbjct: 195 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 254
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +YGKCG+ EA+KVFD++ NV+SWTS+I+ Y Q+ P+ A+++F M P+
Sbjct: 255 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSG 311
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
V+ +AL AC+ L ++ G++IH VV+ + SL S+Y+ CGSL+ A + FNR
Sbjct: 312 VSFSSALNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFNR 370
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRV 294
++ ++ S +I A ++G Q LR + +M EGI + T S+ C T L
Sbjct: 371 MKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADC 430
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHA 353
SL + G + ++ + + G + +A++L + M + + V W +++G
Sbjct: 431 RDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCK 490
Query: 354 QMMDLAKDDLSA 365
+ DL + + +A
Sbjct: 491 RHGDLNRGERAA 502
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/711 (32%), Positives = 370/711 (52%), Gaps = 69/711 (9%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
T LV+ Y G + ++ FD++P R + V ++IS + + S A+ VF +L +
Sbjct: 93 TSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASD 152
Query: 171 N--YPTNVTLGTALTACSSLESIRLGK--QIHAYVVKYQTEDDTSVGNSLCSLYSTC--- 223
+ P + + + L+A + + + Q+H V K SV N+L +LY C
Sbjct: 153 DSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAP 212
Query: 224 GSLNSAIKAFNRIREKNVMSWTTV-------------------------------IGACG 252
G A K + + EK+ ++WTT+ I
Sbjct: 213 GVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYV 272
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY----A 308
++G + F +M+S+ I P+EFT TS+ S C G VH I+L
Sbjct: 273 QSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPE 332
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA------- 359
+ L V N+++ LY K G + A K+FD M+ ++V+WN +++G+ + +D A
Sbjct: 333 AALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEM 392
Query: 360 --KDDLS--------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
K +LS H G E AL +F+++ S +KP YT++ + C L AL+ G+
Sbjct: 393 PYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGK 452
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
Q+HA ++ GF + G AL+ MY +CG ++ A VF+ M +SW +MI+ H
Sbjct: 453 QLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHG 512
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+AL+LF+ M+ G+ P++++F+ L AC++AG+V + YFE M++++ I P DHY
Sbjct: 513 HGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHY 572
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
LID+ R G I EA D IK M FEP IW ++GCR +G+MELG YAA+QL K+ P
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVP 632
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ +Y +L + + +AGRW D A V+ L R+ + + SWI + +KV+ F D HP
Sbjct: 633 EHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHP 692
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIV 703
+ E+++ L+ + K + GY F L D +E HSE+LA++FGLL P
Sbjct: 693 DAHEVYRFLEMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAG 752
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + V+K+ +C DCH + ++ REI+VRD +R H F +G C+C ++
Sbjct: 753 ATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNY 803
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/461 (24%), Positives = 205/461 (44%), Gaps = 84/461 (18%)
Query: 76 SYVSLLQEC--VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC---GNMEEAQK 130
S+ SLL ++ ++S+ +H + K G+ V L+ +Y KC G +A+K
Sbjct: 161 SFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARK 220
Query: 131 VFDNLPRINVVSWTS-------------------------------LISGYVQNSQPELA 159
V D +P + ++WT+ +ISGYVQ+ A
Sbjct: 221 VLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEA 280
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ----TEDDTSVGNS 215
+F M+ P T + L+AC++ GK +H ++ Q E V N+
Sbjct: 281 FELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNA 340
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI-----GACGEN---------------- 254
L +LYS G + A K F+ + K+V+SW T++ C +N
Sbjct: 341 LVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSW 400
Query: 255 ----------GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
G A L+ F++M SE ++P ++T + CG + +L+ G Q+H+ ++
Sbjct: 401 MVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQ 460
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G+ ++ N+++ +Y +CG V +A+ +F M +V+ V+WNAMI+ L
Sbjct: 461 CGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA-----------LG 509
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDV 423
H G EAL +F ++ + G+ PD +F +ILT C+ ++ G Q ++ G
Sbjct: 510 QHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGE 569
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITG 463
L+++ + GRI A + M T W ++++G
Sbjct: 570 DHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/505 (22%), Positives = 211/505 (41%), Gaps = 101/505 (20%)
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR--EKNVMSWTTVIGACGENGEAVQ 259
V ++ + SL S Y+ G L + F+ + ++ + +I A A
Sbjct: 81 VLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAP 140
Query: 260 GLRFFSKMLS--EGIQPNEFTLTSISSVCGTMLSLRVG--AQVHSLGIKLGYASNLRVRN 315
+ F +L+ + ++P++++ TS+ S G M L V Q+H KLG + L V N
Sbjct: 141 AVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSN 200
Query: 316 SIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL--AKDDLSAHNGG- 369
+++ LY+KC G+ +A+K+ D M + +TW ++ GH + D+ A+ +G
Sbjct: 201 ALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEF 260
Query: 370 -----------------TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
EA +F ++ S + PD +TF+S+L+ C+ G+ +H
Sbjct: 261 DVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHG 320
Query: 413 --LTLKTGFLSDVV--VGTALVNMYKKCGRI----------------------------- 439
+ L+ F+ + V ALV +Y K G+I
Sbjct: 321 QFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESG 380
Query: 440 --ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
+ A+R+F EM ++ +SW M++G+ + L+ AL+LF M V+P T+ GA+A
Sbjct: 381 CLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVA 440
Query: 498 ACSNAGMV----------------------------YEALGYFEMMQKEYKIKPVMD--H 527
AC G + Y G + + + + P +D
Sbjct: 441 ACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVS 500
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+ +I + G EA + +M P+ + + + C G ++ GF E +
Sbjct: 501 WNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESME 560
Query: 585 K---LKPKDCESYAMLLDIFVSAGR 606
+ + P + + YA L+D+ AGR
Sbjct: 561 RDFGISPGE-DHYARLIDLLGRAGR 584
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 8/186 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y + C +L + + +HAH+V+ G L+ +Y +CG +++A+ VF +
Sbjct: 434 TYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVM 493
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++ VSW ++IS Q+ A+ +F M+ G YP ++ T LTAC+ + G
Sbjct: 494 PNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGF 553
Query: 196 QIHAYVVKYQTEDDTSVGNS----LCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGA 250
Q Y + + S G L L G + A + E W ++
Sbjct: 554 Q---YFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSG 610
Query: 251 CGENGE 256
C NG+
Sbjct: 611 CRINGD 616
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/593 (34%), Positives = 332/593 (55%), Gaps = 16/593 (2%)
Query: 167 LEAGNYPTNVTLGTAL-TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
LE Y + AL +AC L SIR K++ Y++ E D V N + ++ CG
Sbjct: 109 LEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGL 168
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ A K F+ + EK+V SW T++G + G + R F M E T ++
Sbjct: 169 MLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRA 228
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ ++VG Q+HS +K G + V +++ +Y KCG +++A +FD M V W
Sbjct: 229 SAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGW 288
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
N++IA +A H EALS++ ++ SG D +T S ++ IC+RL +LE
Sbjct: 289 NSIIASYA-----------LHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLE 337
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+Q HA ++ GF +D+V TALV+ Y K GR+E A VF M + +ISW ++I G+
Sbjct: 338 HAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYG 397
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
NH +A+++FE ML GV P VTF+ L+ACS +G+ F M++++K+KP
Sbjct: 398 NHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKVKPRA 457
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY C+I++ R ++EA+ I+ F+P +W+ + CR H N+ELG AAE+L
Sbjct: 458 MHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEKLYG 517
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
++P+ +Y +LL+++ S+G+ ++ A + +++ L SW+ +K + Y+F D
Sbjct: 518 MEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFLCGDK 577
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV--YHSEKLAIAFGLLNTP 701
H Q+ EI++ +D L+ + GY ++ L DEE + YHSEKLAIAFGL+NTP
Sbjct: 578 SHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQRILKYHSEKLAIAFGLINTP 637
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+P+ + + +C DCH+ IK+I +T REI+VRD+ R H F NG C+C D+
Sbjct: 638 HWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDY 690
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 236/479 (49%), Gaps = 19/479 (3%)
Query: 43 KLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK 102
KL+ N + E ++ E L + +G V S+Y +L+ CV +S+ + + +++
Sbjct: 90 KLVVCNRHRE---AMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMIN 146
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
+G D +VM ++ ++ KCG M +A+K+FD +P +V SW +++ G V A +
Sbjct: 147 SGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRL 206
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
FL M + N + T T + A + L +++GKQIH+ +K DD V +L +YS
Sbjct: 207 FLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSK 266
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS+ A F+++ EK + W ++I + +G + + L + +M G + FT++ +
Sbjct: 267 CGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIV 326
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+C + SL Q H+ ++ G+A+++ +++ Y K G +++A+ +F+ M H N+
Sbjct: 327 IRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNV 386
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
++WNA+IAG+ H G EA+ +F ++ G+ P TF ++L+ CS
Sbjct: 387 ISWNALIAGYGN-----------HGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSG 435
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
++G +I + + + A M + GR + + T +M
Sbjct: 436 LSQRGWEIFYSMKRDHKVKPRAMHYAC--MIELLGRESLLDEAYALIRTAPFKPTANMWA 493
Query: 463 GFANHSLSHQALQL--FEDMLLAGVRPNQV-TFVGALAACSNAGMVYEALGYFEMMQKE 518
H+ L+L L G+ P ++ ++ L +++G + EA G + ++K+
Sbjct: 494 ALLTACRMHKNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKK 552
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 321/552 (58%), Gaps = 15/552 (2%)
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
E D + N + ++ CG + A + F+ + E+N++SW T+I + G+ ++ R F
Sbjct: 7 EFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLN 66
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M E FT + + + +G Q+H+ +K+G ++ V +++ +Y KCG
Sbjct: 67 MWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGS 126
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+++A+ +F+ M V WN +IAG+A H EAL ++ ++ SG+K
Sbjct: 127 IEDARFVFEEMPEKTTVGWNTIIAGYA-----------LHGYSEEALDMYYEMRDSGVKM 175
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D +TFS I+ IC+RL ++E +Q HA ++ GF SD+V TALV+ Y K GRIE A VF
Sbjct: 176 DHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVF 235
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+M+++ +ISW ++I G+ NH +A++LFE M+ + PN +TF+ L+ACS++G+
Sbjct: 236 DKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSE 295
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
F+ M ++ +IKP HY C+I++ R G ++EA I+ F+P +W+ +
Sbjct: 296 RGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTA 355
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR + N ELG +AAE+L ++P +Y +LL+I+ SAG ++ A V + + + L
Sbjct: 356 CRVNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRP 415
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EES 682
SWI +K + + F D HPQ EI++ +D+L+ + +GY + L D EE
Sbjct: 416 VCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEER 475
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
+YHSEKLAIAFGL++TP +P+ +V+ +C DCH IK+I +T REI++RD+ R H
Sbjct: 476 VRLYHSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFH 535
Query: 743 KFVNGHCTCRDF 754
F +GHC+C D+
Sbjct: 536 HFKHGHCSCEDY 547
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 198/456 (43%), Gaps = 69/456 (15%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
F+ L++ E + ++ +++ + +S +HA +K G D FV L++
Sbjct: 60 AFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALID 119
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG++E+A+ VF+ +P V W ++I+GY + E A+ ++ +M ++G + T
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFT 179
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ C+ L S+ KQ HA ++++ D +L YS G + A F+++
Sbjct: 180 FSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDKMA 239
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
KNV+SW +IG G +G + + F +M+ E + PN T ++ S C
Sbjct: 240 SKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACS---------- 289
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
HS GL + ++F M N + AM +A M++
Sbjct: 290 -HS------------------------GLSERGWEIFQSMGRDNRIKPRAM--HYACMIE 322
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG----EQIHAL 413
L + EAL++ + + KP ++++LT C E G E+++ +
Sbjct: 323 L----MGREGLLDEALAL---IRGAPFKPTANMWAALLTACRVNENFELGKFAAEKLYGM 375
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-----TRTLISWTSM-------I 461
L++ +V L+N+Y G ++ A+ V + R + SW + +
Sbjct: 376 EPDK--LNNYIV---LLNIYNSAGNLKEAADVVHTLKRKGLRMRPVCSWIEVKRRPHVFL 430
Query: 462 TGFANHSLSHQALQLFEDMLLA----GVRPNQVTFV 493
+G H + Q + ++L G PNQ T +
Sbjct: 431 SGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLL 466
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 6/162 (3%)
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ GF D + ++ M+ KCG + A R+F EM R L+SW ++I+G + +A
Sbjct: 2 IDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEAF 61
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLI 532
+LF +M TF A+ ++AG+ ++G ++ K+ D ++ LI
Sbjct: 62 RLFLNMWEEFSDAGSFTF--AVMIRASAGLELISIGR-QLHACTLKMGIGDDIFVSCALI 118
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
DM+ + G IE+A ++M E V W+ IAG HG E
Sbjct: 119 DMYSKCGSIEDARFVFEEMP-EKTTVGWNTIIAGYALHGYSE 159
>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/586 (36%), Positives = 329/586 (56%), Gaps = 19/586 (3%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNR 235
+L + + + S + RLG+ HA ++K S + N L ++YS NSA +
Sbjct: 8 SLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSL 67
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
++V++WT +I +NG L FS M + IQPN+FT G++ S VG
Sbjct: 68 TPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG 127
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
QVH+L +K G S++ V S +Y K GL +EA+K+FD M N+ TWNA ++ +
Sbjct: 128 KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSN--SV 185
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
++ DD AL+ F + G++P + SS+L+ C+ L LE G+ +H L +
Sbjct: 186 LEGRYDD---------ALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAV 236
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K + ++ VG+ALV+MY KCG IE A R F EM R L++W +MI G+A+ + A+
Sbjct: 237 KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVT 296
Query: 476 LFEDMLLAGVR--PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
LF++M R PN VTFV L+ACS AG V + FE M+ Y I+P +HY C++D
Sbjct: 297 LFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVD 356
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +E+A+ FIKKM P +W + + G ELG AA+ L +L P D +
Sbjct: 357 LLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGN 416
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
+ +L ++F +AGRWE+ +V+ ++ + + SWI + V+ F+ D H +++EI
Sbjct: 417 HVLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEI 476
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD--EESASV---YHSEKLAIAFGLLNTPIVSPILV 708
+L +L + + GY SF L D EE ++ YHSEK+A+AFGL++ P PI +
Sbjct: 477 QAMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRI 536
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH+ IK I+ + REIIVRD+ H+F + C+CRD+
Sbjct: 537 TKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDY 582
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 198/398 (49%), Gaps = 18/398 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEA 128
P + +S SL++ V+ + HA I+KT + F+ LVN+Y K A
Sbjct: 2 PFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
Q + P +VV+WT+LI+G VQN + A+ F +M P + T A A SL
Sbjct: 62 QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSL 121
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S +GKQ+HA VK D VG S +YS G A K F+ + E+N+ +W +
Sbjct: 122 RSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYL 181
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G L F + EGI+P +F ++S+ S C + L VG VH+L +K
Sbjct: 182 SNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV 241
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N+ V ++++ +Y KCG +++A++ FD M NLVTWNAMI G+ AH G
Sbjct: 242 GNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGY------------AHQG 289
Query: 369 GTE-ALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVV 424
+ A+++F ++ S + P+ TF +L+ CSR ++ G +I ++ + G
Sbjct: 290 QADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAE 349
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMI 461
+V++ + G +E+A + +M R +S W +++
Sbjct: 350 HYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 387
>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 595
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 344/600 (57%), Gaps = 31/600 (5%)
Query: 174 TNVTLGTALTACSSL------ESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGS- 225
T+V L + C +L SI +QIHA+ +++ D +G L + S
Sbjct: 7 TSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP 66
Query: 226 --LNSAIKAFNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTS 281
++ A K F++I + NV W T+I E G ++ + +M G ++P+ T
Sbjct: 67 PPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPF 126
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ TM +R+G +HS+ I+ G+ S + V+NS+++LY CG V A K+FD M +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSR 400
LV WN++I G A+ NG E AL++++++NS G+KPD +T S+L+ C++
Sbjct: 187 LVAWNSVINGFAE------------NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ AL G+++H +K G ++ L+++Y +CGR+E A +F EM + +SWTS+
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 461 ITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
I G A + +A++LF+ M G+ P ++TFVG L ACS+ GMV E YF M++EY
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
KI+P ++H+ C++D+ R G +++A+++IK M +PN VIW + C HG+ +L +A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
Q+L+L+P Y +L +++ S RW DV ++ + + + S + + ++V+
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIA 694
F D HPQS I+ L E+ + + GY Q S E ++E+A VYHSEK+AIA
Sbjct: 475 FLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIA 534
Query: 695 FGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
F L++TP SPI VVK+ +C DCH IK+++ + REI+VRD R H F NG C+C+D+
Sbjct: 535 FMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 31/406 (7%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR-INVVSWTSLI 147
S+S+AE+ G H F++++ M A KVF + + INV W +LI
Sbjct: 46 SISDAEL--------GKHLIFYLVSL-----PSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
GY + A ++ +M +G P T + A +++ +RLG+ IH+ V++
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
V NSL LY+ CG + SA K F+++ EK++++W +VI ENG+ + L +++
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M S+GI+P+ FT+ S+ S C + +L +G +VH IK+G NL N ++ LY +CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS-GMK 385
V+EA+ LFD M N V+W ++I G L+ + G EA+ +F + S+ G+
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVG-----------LAVNGFGKEAIELFKYMESTEGLL 321
Query: 386 PDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
P TF IL CS +++G E + + + +V++ + G++++A
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 445 VFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
M + ++ W +++ H S L F + + + PN
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNH 425
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 8/307 (2%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
GNS SL + +S L E T +Y L++ + E IH+ ++++G
Sbjct: 99 GNSISAFSLYREMRVSGLVEP---DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSL 155
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+V L+++Y CG++ A KVFD +P ++V+W S+I+G+ +N +PE A+ ++ +M
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P T+ + L+AC+ + ++ LGK++H Y++K + N L LY+ CG +
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCG 287
A F+ + +KN +SWT++I NG + + F M S EG+ P E T I C
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
++ G + + ++ Y R+ + ++ L + G V +A + M N+V
Sbjct: 336 HCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 345 WNAMIAG 351
W ++
Sbjct: 395 WRTLLGA 401
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/730 (30%), Positives = 389/730 (53%), Gaps = 45/730 (6%)
Query: 54 VRSLGFQEALSVLTE-----GPKVQTSSYVSLLQECVNRK--SLSNAEIIHAHIVKTGSH 106
+R+ +EAL + + P + ++VS+L CV SL + IH IV G
Sbjct: 87 LRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIE 146
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVF----DNLPRINVVSWTSLISGYVQNSQPELAIHV 162
++ FV T LV+ YGK G++++A +VF D P ++V+ +++IS QN P+ ++ +
Sbjct: 147 REAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRL 206
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-----DDTSVGNSLC 217
F M G P+ VTL + L ACS L +G A+V++ E D +G +L
Sbjct: 207 FYAMNLEGTKPSGVTLVSVLNACSMLP---VGSAT-AFVLEQAMEVVSATRDNVLGTTLL 262
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
+ Y+ L+ A F+ I+ +V+SW + A ++ + L F +ML EG++P+
Sbjct: 263 TTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVA 322
Query: 278 TLTSISSVCGT---MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
T + + C + +G ++ SL + G + V N+ + +Y KCG + +A+ +F
Sbjct: 323 TFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVF 382
Query: 335 DGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM-KPDLYTF 391
+ +S + +TWN+M+A + H G EA +F + + + KP+ TF
Sbjct: 383 ERISPTRRDCITWNSMLAAYGH-----------HGLGKEAFELFQAMEAEKLVKPNKVTF 431
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
++L + ++ QG +IHA + GF SD V+ AL+NMY KCG ++ A +F + S+
Sbjct: 432 VAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 491
Query: 452 --RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+I+WTS++ G+A + + +AL+LF M GVRPN +TF+ AL AC++ G + +
Sbjct: 492 NQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGC 551
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
M ++ I P H+ C++D+ R G ++EA +++ + + + W + C+
Sbjct: 552 ELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKN 610
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
+E G AE++++L P+ SY +L ++ +AGRW + A ++ ++ + S
Sbjct: 611 SKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCS 670
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESAS 684
+ + +++SF D HP+S EI+ L+ L K GY L D +E
Sbjct: 671 AVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLL 730
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
+ HSEKLAIAFGL++TP SP+ V+K+ +C DCH K+I+ +T R+I++RDS R H F
Sbjct: 731 MRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHF 790
Query: 745 VNGHCTCRDF 754
+G C+C D+
Sbjct: 791 TSGTCSCGDY 800
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/533 (27%), Positives = 263/533 (49%), Gaps = 45/533 (8%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+ ++L+ C +L+ IH+ I ++ + L+++Y KCG++ +A++ FD L
Sbjct: 9 ALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRL 68
Query: 136 PRI---NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACS----- 186
PR +VV+W ++IS +++N A+ +F DM G P N VT + L +C
Sbjct: 69 PRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLL 128
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK----NVM 242
SLE +R IH +V E + V +L Y GSL+ A + F R ++ +++
Sbjct: 129 SLEDVR---AIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLV 185
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+ + +I AC +NG + LR F M EG +P+ TL S+ + C + A V
Sbjct: 186 TCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQA 245
Query: 303 IKLGYASNLRV-RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+++ A+ V +++ Y + + A+ FD + ++V+WNAM A + Q
Sbjct: 246 MEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQ------- 298
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL---VALEQGEQIHALTLKTG 418
H+ EAL +F ++ G++P + TF + LT C+ A G++I +L + G
Sbjct: 299 ----HHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAG 354
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMST--RTLISWTSMITGFANHSLSHQALQL 476
D V A +NMY KCG + A VF +S R I+W SM+ + +H L +A +L
Sbjct: 355 LEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFEL 414
Query: 477 FEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDM 534
F+ M V+PN+VTFV L A ++ + + + ++ ++ V+ + L++M
Sbjct: 415 FQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQN--ALLNM 472
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLKL 586
+ + G +++A K +VI W+ +AG ++G AE+ LKL
Sbjct: 473 YAKCGSLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQ-------AERALKL 518
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 212/445 (47%), Gaps = 41/445 (9%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI---RE 238
+ ACS L ++ G++IH+ + E+++ +GN+L S+YS CGSL A +AF+R+ +
Sbjct: 14 VNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASK 73
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVC--GTMLSLRVG 295
++V++W +I A NG A + L+ F M +G PN T S+ C +LSL
Sbjct: 74 RDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDV 133
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF----DGMSHVNLVTWNAMIAG 351
+H + G VR +++ Y K G +D+A ++F D +LVT +AMI+
Sbjct: 134 RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISA 193
Query: 352 HAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRL-------VA 403
Q NG E+L +F +N G KP T S+L CS L
Sbjct: 194 CWQ------------NGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
LEQ ++ + T D V+GT L+ Y + + RA F + + ++SW +M
Sbjct: 242 LEQAMEVVSAT------RDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAA 295
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALG-YFEMMQKEYKI 521
+ H +AL LFE MLL GVRP+ TF+ AL AC+ A+G + + +E +
Sbjct: 296 YLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGL 355
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGF--Y 578
+ ++M+ + G + +A +++ + I W+ +A HG + F +
Sbjct: 356 EGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELF 415
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVS 603
A + KL + ++ +LD S
Sbjct: 416 QAMEAEKLVKPNKVTFVAVLDASTS 440
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 32/328 (9%)
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
++PN L ++ + C + +L G ++HS + N + N+++ +Y KCG + +A+
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 332 KLFDGM---SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM-KPD 387
+ FD + S ++VTWNAMI+ + + EAL +F ++ G P+
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLR-----------NGSAREALQLFRDMDHDGAPPPN 111
Query: 388 LYTFSSILTIC--SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
TF S+L C + L++LE IH + G + V TALV+ Y K G ++ A V
Sbjct: 112 SVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEV 171
Query: 446 FV----EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
F+ E + +L++ ++MI+ + ++L+LF M L G +P+ VT V L ACS
Sbjct: 172 FLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSM 231
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPN 556
+ + F + Q + D+ + L+ + R + A FD I+ P+
Sbjct: 232 --LPVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQS----PD 285
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLL 584
V W+ A +H E++L
Sbjct: 286 VVSWNAMAAAYLQHHRPREALVLFERML 313
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/717 (30%), Positives = 387/717 (53%), Gaps = 32/717 (4%)
Query: 54 VRSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++ +QEAL V E + + S + S+L C + ++ + G +D
Sbjct: 44 VQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDV 103
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V T L++++ KCG +EEA+ VF ++ + +++S T++I YV++ + +LA+ + M
Sbjct: 104 VVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRS 163
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P T L ACSS + + GK IH ++++ + + SV N+L ++Y+ CGSL
Sbjct: 164 QGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKD 223
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
+ F + K+V+SW +I A G F +M + G P+ +T +SI C +
Sbjct: 224 SKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACAS 283
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
L G +H G+ + ++N+++ ++ +CG ++ A++ F + L WN M
Sbjct: 284 PKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTM 343
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+A +AQ + G +AL ++ + G PD +TFSS++ C+ L AL +G+
Sbjct: 344 LAAYAQF-----------DKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGK 392
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH + GF DV++GTALVNMY KCG + A + F +S + ++SW++MI A H
Sbjct: 393 FIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHG 452
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ +AL+L M L G+ N+VT L ACS+ G +YE + YF + +++ I+ ++
Sbjct: 453 HAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENT 512
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
+ ID+ R G ++EA + M F+ + V + GC+ HG++ G ++++ L+P
Sbjct: 513 VGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEP 572
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
++ SY +L +++ +AGRW+DVA ++ R++ + S I +DK+Y F D +P
Sbjct: 573 ENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNP 632
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESF---------ELTDEESASV--YHSEKLAIAFGL 697
++ EI L+ L + K++E + +++D++ + +HSEK+A+ FGL
Sbjct: 633 RNLEIRAELERLYSRM-----KEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGL 687
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +P S + ++K+ +C DCH K+ + +T R IIVRD R H F G C+C D+
Sbjct: 688 ITSPPGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDY 744
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/471 (30%), Positives = 242/471 (51%), Gaps = 20/471 (4%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D F+ ++ +YGKC + E+A++VFD + + N SW+ L+ YVQN+ + A+ V+ +M+
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
TL + L AC+ L + G+ + + E D V SL L++ CG L
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 228 SAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A F + ++++S T +IGA +G+ L + KM S+G++P+ FT +I C
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ L G +H ++ + N+ VRN+++ +Y KCG + +++ LF M ++V+WN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
AMIA + L H+ +A S+F ++ + G PD+YTFSSIL C+ LE
Sbjct: 241 AMIAAYT---------LYGHD--KDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLED 289
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G +H GF D + L++M+ +CG +E A R F + + L +W +M+ +A
Sbjct: 290 GRMLHVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQ 349
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
AL L+++MLL G P++ TF + +C++ G + E E K V+
Sbjct: 350 FDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVIL 409
Query: 527 HYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
L++M+ + G + +A FD I D V WS IA +HG+ E
Sbjct: 410 G-TALVNMYAKCGSLADAKKSFDGISNKDV----VSWSAMIAASAQHGHAE 455
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/718 (31%), Positives = 367/718 (51%), Gaps = 83/718 (11%)
Query: 66 LTEGPKVQTSSYVSLLQECVN---RKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGK 121
+T + Y ++L R + A +H I+KT F++ L+ Y K
Sbjct: 1 MTHAAHALCNRYAAILSSAAGDGGRTGVRVAGAVHCLILKTFLQAPPTFLLNHLLTAYAK 60
Query: 122 CGNMEEAQKVFDNLPRINV-------------------------------VSWTSLISGY 150
G + A++VFD +P N+ VS+ +LI+G+
Sbjct: 61 SGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAVSYNALITGF 120
Query: 151 VQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
P ++ ++ +L E PT +TL + S+L LG +H V++
Sbjct: 121 SSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQVLRLGFGAY 180
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---------------------------- 241
VG+ L +Y+ G + A + F + K V
Sbjct: 181 AFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD 240
Query: 242 ---MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++WTT++ +NG ++ L F +M +EG+ +++T SI + CG + +L G Q+
Sbjct: 241 RDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQI 300
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H+ + Y N+ V ++++ +Y KC + A+ +F M+ N+++W AMI G+ Q
Sbjct: 301 HAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQ---- 356
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+ EA+ FS++ G+KPD +T S+++ C+ L +LE+G Q H L L +G
Sbjct: 357 -------NACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 409
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ + V ALV +Y KCG IE A R+F EMS +SWT+++TG+A + + + LFE
Sbjct: 410 LMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFE 469
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
ML G++P+ VTF+G L+ACS AG+V + YF+ MQK++ I P+ DHY C+ID++ R
Sbjct: 470 KMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRS 529
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +EA +FIK+M P+ W+ ++ CR GNME+G +AAE LL+ P++ SY +L
Sbjct: 530 GRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLC 589
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+ + G+W +VA ++ R+ ++ + SWI+ K+KV+ F +D HP S+ I++ L+
Sbjct: 590 SMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSSRIYEKLE 649
Query: 659 ELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKS 711
L K GYK S L D A +HSEKLAIAFGL+ P PI +VK+
Sbjct: 650 WLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIFVPQEMPIRIVKN 707
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 226/446 (50%), Gaps = 51/446 (11%)
Query: 53 PVRSLGFQEALSVLTE---GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
P RS+ AL L E P T S + ++ ++ ++L ++ +H +++ G
Sbjct: 126 PARSVQLYRAL--LREESVRPTRITLSAMIMVASALSDRALGHS--VHCQVLRLGFGAYA 181
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV---------------------------- 141
FV + LV++Y K G + +A++VF + VV
Sbjct: 182 FVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVDR 241
Query: 142 ---SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+WT++++G QN A+ VF M G T G+ LTAC +L ++ GKQIH
Sbjct: 242 DSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIH 301
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AY+ + ED+ VG++L +YS C S+ A F R+ +N++SWT +I G+N +
Sbjct: 302 AYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVGYGQNACSE 361
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ +R FS+M +GI+P++FTL S+ S C + SL GAQ H L + G + V N+++
Sbjct: 362 EAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALV 421
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY KCG +++A +LFD MS + V+W A++ G+AQ E + +F K
Sbjct: 422 TLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQF-----------GKAKETIDLFEK 470
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ ++G+KPD TF +L+ CSR +E+G + ++ G + T ++++Y + G
Sbjct: 471 MLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSG 530
Query: 438 RIERASRVFVEMS-TRTLISWTSMIT 462
R + A +M + W ++++
Sbjct: 531 RFKEAEEFIKQMPHSPDAFGWATLLS 556
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 333/597 (55%), Gaps = 18/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD+L AG PT + + AC+ +++ + IHA++ + D + NSL +Y
Sbjct: 48 LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CG+++ A F+++ ++V+SWT +I +N + + ML +PN FT TS+
Sbjct: 108 CGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSL 167
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
G +G Q+H+L +K + ++ V ++++ +Y +C +D A +FD + N
Sbjct: 168 LKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNE 227
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+IAG A+ D G L F+++ +G +T+SS+ + +R+
Sbjct: 228 VSWNALIAGFARKAD-----------GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIG 276
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
ALEQG +HA +K+G VG ++ MY K G + A +VF M R L++W +M+T
Sbjct: 277 ALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLT 336
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
A + L +A+ FE++ G++ NQ+TF+ L ACS+ G+V E YF+MM K+Y ++
Sbjct: 337 ALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KDYNVQ 395
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P +DHY+ +D+ R G ++EA F+ KM EP +W + CR H N ++G YAA+
Sbjct: 396 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADH 455
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D +L +I+ S G+W D A V+ + + + + SW++I++ V+ F
Sbjct: 456 VFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVA 515
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGL 697
+D HP+S +I+++ +E+ + K GY + L + E+ YHSEK+A+AF L
Sbjct: 516 DDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFAL 575
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+N P + I ++K+ +C DCH+ K ++ + REI+VRD+ R H F G C+C D+
Sbjct: 576 INMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDY 632
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 208/407 (51%), Gaps = 13/407 (3%)
Query: 37 YQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSS-YVSLLQECVNRKSLSNAEI 95
Y + + + ++ S P S G +E L +L G T Y S++ C K+L+ A
Sbjct: 23 YTSAAHRAVPISFPSSPASSTGLRE-LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARA 81
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHAH+ ++ D F++ L+++Y KCG + +A+ VFD +P +VVSWT LI+GY QN
Sbjct: 82 IHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYM 141
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P AI + DML A P T + L A + +G+Q+HA VKY ++D VG++
Sbjct: 142 PAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSA 201
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ C ++ AI F+R+ KN +SW +I + L F++M G
Sbjct: 202 LLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGAT 261
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
FT +S+ S + +L G VH+ IK G V N+++ +Y K G + +A+K+FD
Sbjct: 262 HFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFD 321
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M +LVTWN M+ AQ + G EA++ F ++ G++ + TF S+L
Sbjct: 322 RMDKRDLVTWNTMLTALAQ-----------YGLGKEAVAHFEEIRKCGIQLNQITFLSVL 370
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
T CS +++G+ + ++ + V++ + G ++ A
Sbjct: 371 TACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEA 417
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S+ +L +HAH++K+G FV ++ +Y K G+M +A+KVFD +
Sbjct: 264 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM 323
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ ++V+W ++++ Q + A+ F ++ + G +T + LTACS ++ GK
Sbjct: 324 DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK 383
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA-IKAFNRIREKNVMSWTTVIGACGEN 254
+ Y + + S L G L A I F E W ++GAC +
Sbjct: 384 HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 443
Query: 255 GEAVQG 260
A G
Sbjct: 444 KNAKMG 449
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/709 (31%), Positives = 376/709 (53%), Gaps = 42/709 (5%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
+R+ F+ A + E P+ S+ +++ V ++L A + + +D
Sbjct: 106 LRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR----ELFEIMPERDVCSWN 161
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G +++A+ VFD +P N VSW +L+S YVQNS+ E A +F
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
N LG + +E+ + ++ D N++ + Y+ G ++ A + F
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNV--------RDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ ++V +WT ++ +N + F KM + NE + + ML+
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNA-------MLAGY 322
Query: 294 VGAQVHSLGIKL---GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
V + + +L N+ N+++ Y +CG + EA+ LFD M + V+W AMIA
Sbjct: 323 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G++Q S H+ EAL +F ++ G + + +FSS L+ C+ +VALE G+Q+
Sbjct: 383 GYSQ---------SGHS--FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H +K G+ + VG AL+ MY KCG IE A+ +F EM+ + ++SW +MI G++ H
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
AL+ FE M G++P+ T V L+ACS+ G+V + YF M ++Y + P HY C
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G +E+A + +K M FEP+ IW + R HGN EL AA+++ ++P++
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
Y +L +++ S+GRW DV ++ R++ + + +SWI I++K ++F D HP+
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEK 671
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
EIF L+EL + K GY + S L D +E YHSE+LA+A+G++ P
Sbjct: 672 DEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRP 731
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V+K+ +C DCHN IK + +T R II+RD+ R H F +G C+C D+
Sbjct: 732 IRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDY 780
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 192/476 (40%), Gaps = 104/476 (21%)
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D N S Y G N A++ F R+ + +S+ +I NGE + F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M E L S + + + R + L ++ ++ N+++ Y + G
Sbjct: 121 M-------PERDLVSWNVMIKGYVRNRNLGKAREL-FEIMPERDVCSWNTMLSGYAQNGC 172
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQ--------MMDLAKDD--LSAHN---GG---- 369
VD+A+ +FD M N V+WNA+++ + Q M+ ++++ L + N GG
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 370 ---TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA F +N D+ ++++I+T ++ +++ Q+ + DV
Sbjct: 233 KKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQL----FDESPVQDVFTW 284
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV- 485
TA+V+ Y + +E A +F +M R +SW +M+ G+ A +LF+ M V
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 486 --------------------------RPNQVTFVGALAACSNAGMVYEALGYFEMMQKE- 518
+ + V++ +A S +G +EAL F M++E
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 519 -----------------------------------YKIKPVMDHYMCLIDMFVRLGCIEE 543
Y+ + + + L M+ + G IEE
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEE 462
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAML 597
A D K+M + + V W+ IAG RHG E L F+ + + LKP D A+L
Sbjct: 463 ANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/665 (33%), Positives = 359/665 (53%), Gaps = 49/665 (7%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF+ + N + W ++I G+ +S P ++ +++ M+ G P + T L +C+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY--------------------------- 220
++ G+QIH V+K + D V SL S+Y
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 221 ----STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++ G + SA K F+ I K+V+SW +I E G + L F +M+ ++P+E
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDE 196
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T ++ S C S+ +G QVHS G+ SNL++ N+++ LY KCG V+ A LF G
Sbjct: 197 STYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQG 256
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+S+ ++++WN +I G+ M N EAL +F ++ SG P+ T S+L
Sbjct: 257 LSYKDVISWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGETPNDVTMLSVLP 305
Query: 397 ICSRLVALEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C+ L A++ G IH K G + + T+L++MY KCG IE A +VF M ++L
Sbjct: 306 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 365
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
SW +MI GFA H + + LF M G+ P+ +TFVG L+ACS++GM+ F
Sbjct: 366 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 425
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M ++YK+ P ++HY C+ID+ G +EA + I M+ EP+ VIW + C+ HGN+E
Sbjct: 426 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 485
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L A+ L+K++P++ SY +L +I+ SAGRWEDVA ++ L + + + S I +
Sbjct: 486 LAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVD 545
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
V+ F D HPQ+ EI+ +L+E+ + G+ S L + +E A +HSE
Sbjct: 546 SVVFEFVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSE 605
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFGL++T + + +VK+ +CR+CH K+++ + REI+ RD R H F +G C
Sbjct: 606 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVC 665
Query: 750 TCRDF 754
+C D+
Sbjct: 666 SCNDY 670
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 189/394 (47%), Gaps = 46/394 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG----- 104
+S+PV SL + L P T + LL+ C K+ + + IH ++K G
Sbjct: 42 SSDPVSSLTLYVCMVSLGLLPNSYTFPF--LLKSCAKSKTFTEGQQIHGQVLKLGFDLDL 99
Query: 105 --------------------------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SH+D T L+ Y G++ AQK+FD +P
Sbjct: 100 YVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVK 159
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSW ++ISGY + + A+ +F +M++ P T T L+AC+ SI LG+Q+H
Sbjct: 160 DVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVH 219
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++V + + + + N+L LYS CG + +A F + K+V+SW T+IG
Sbjct: 220 SWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYK 279
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL--GYASNLRVRNS 316
+ L F +ML G PN+ T+ S+ C + ++ +G +H K G + +R S
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG ++ A ++F+ M H +L +WNAMI G A H + +F
Sbjct: 340 LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM-----------HGRADASFDLF 388
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
S++ G++PD TF +L+ CS L+ G I
Sbjct: 389 SRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 145/286 (50%), Gaps = 7/286 (2%)
Query: 59 FQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + E K+ S+YV++L C + S+ +H+ + G + ++
Sbjct: 177 YKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNA 236
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG +E A +F L +V+SW +LI GY + + A+ +F +ML +G P
Sbjct: 237 LIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 296
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+VT+ + L AC+ L +I +G+ IH Y+ K + +S+ SL +Y+ CG + +A +
Sbjct: 297 DVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQV 356
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
FN + K++ SW +I +G A FS+M GI+P++ T + S C L
Sbjct: 357 FNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGML 416
Query: 293 RVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + S+ L ++ L GL EA+++ + M
Sbjct: 417 DLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 462
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/588 (34%), Positives = 338/588 (57%), Gaps = 19/588 (3%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
PT + L +C + ++I+ GKQ+HA V DT + L +LY C SL+SA
Sbjct: 73 PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+RI + N+ W +I NG ++ + +M G+ P+ FT + C + ++
Sbjct: 133 FDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAI 192
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G ++H ++ G+ ++ V +++ +Y KCG V A+++FD + + V WN+M+A +
Sbjct: 193 EHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAY 252
Query: 353 AQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+Q NG +A LS+ S++ +G++P T + ++ + AL QG ++H
Sbjct: 253 SQ------------NGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELH 300
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L+ + F S V TALV+MY KCG + A +F + + ++SW +MITG+A H +
Sbjct: 301 GLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHAT 360
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL LFE+M +P+ +TFVG L+ACS+ G++ E +FE M ++YKI P + HY C+
Sbjct: 361 EALDLFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCM 419
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ G ++EA++ I +M P+ +W + C+ H N+ELG A E+L++L+P D
Sbjct: 420 VDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDA 479
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+Y +L +I+ AG+WE VA ++ L + +L ++ SWI +K+KV++F D HP S
Sbjct: 480 GNYVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSD 539
Query: 652 EIFKVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPI 706
EI+ L+ + K GY ++ D+E A++ HSE+LAIAFGL++TP + +
Sbjct: 540 EIYSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRL 599
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L+ K+ +C DCH IK I+ +T REI VRD R H F +G C+C D+
Sbjct: 600 LITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDY 647
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 200/376 (53%), Gaps = 13/376 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S+Y SLLQ C+ RK++ + +HA + G D + T LVN+Y C ++ A+ +FD
Sbjct: 76 SNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDR 135
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P+ N+ W LI GY N E A+ ++ M + G P N T L AC++L +I G
Sbjct: 136 IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHG 195
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
++IH +VV+ E D VG +L +Y+ CG + SA + F++I ++ + W +++ A +N
Sbjct: 196 REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQN 255
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G L S+M+ G++P E TL + S +L G ++H L + + S+ +V+
Sbjct: 256 GHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVK 315
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KCG V A+ LF+ + +V+WNAMI G+A H TEAL
Sbjct: 316 TALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAM-----------HGHATEALD 364
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMY 433
+F ++N KPD TF +L+ CS LE+G ++ + V T +V++
Sbjct: 365 LFEEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLL 423
Query: 434 KKCGRIERASRVFVEM 449
GR++ A + ++M
Sbjct: 424 GHSGRLDEAYNLIMQM 439
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 26/364 (7%)
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
S + P S+ C +++ G Q+H+ G+ + + ++ LY C +
Sbjct: 68 STCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS 127
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPD 387
A+ LFD + N+ WN +I G+A NG E A+ ++ ++ G+ PD
Sbjct: 128 SARLLFDRIPKHNIFLWNVLIRGYAW------------NGPYEAAVQLYYQMFDYGLVPD 175
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+TF +L C+ L A+E G +IH ++TG+ DV VG AL++MY KCG + A VF
Sbjct: 176 NFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFD 235
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-----A 502
++ R + W SM+ ++ + L L +M+L G+RP + T V A++A ++
Sbjct: 236 KILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQ 295
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G L + + + K+K L+DM+ + G + A + +++ + V W+
Sbjct: 296 GRELHGLSWRQEFESHDKVK------TALVDMYAKCGSVRVARNLFERLGVK-RVVSWNA 348
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED-VAVVKNLTREEK 621
I G HG+ E++ ++ D ++ +L G E+ + + R+ K
Sbjct: 349 MITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYK 408
Query: 622 LSET 625
+ T
Sbjct: 409 IDPT 412
>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
Length = 916
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/724 (32%), Positives = 383/724 (52%), Gaps = 35/724 (4%)
Query: 49 GNSE-PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
GN E P R+L + + EG +S+V++L C + SL A IHA + + G
Sbjct: 209 GNDERPDRALLLVRRMWL--EGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLG 266
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D V T LV +YG+CG+++E+ VF+ + N VSW ++I+ + Q A ++ M
Sbjct: 267 DVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQ 326
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQ--IHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
+ G P +T TAL A S S LG+ +H ++ E D VG +L ++Y + G+
Sbjct: 327 QEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGA 386
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
++ A AF+ I KN++SW ++ A G+NG A + + F+ M + + PN+ + ++
Sbjct: 387 IDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGC 446
Query: 286 CGTMLSLR-VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + R + A+V G+ +A + N ++ ++ + G ++EA FD + V+
Sbjct: 447 CEDVSEARSIHAEVVGNGL---FAQESSIANGVVRMFARSGSLEEAMAAFDATVVKDSVS 503
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
WN +A + A++DL A++ F + G +PD +T S++ +C+ L L
Sbjct: 504 WNTKVAALS-----AREDLHG------AITAFYTMQHEGFRPDKFTLVSVVDVCADLGTL 552
Query: 405 EQGEQIHA-LTLKTGFLSDVVVGTALVNMYKKCGR-IERASRVFVEM--STRTLISWTSM 460
E G I L+ DVVV +A++NM KCG ++ R+F M + L++W +M
Sbjct: 553 ELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTM 612
Query: 461 ITGFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
I +A H +AL+LF M + VRP+ TFV L+ CS+AG+V + + F + ++
Sbjct: 613 IAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVL 672
Query: 520 KI--KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
I +PV +HY CL+D+ R+G + EA DFI+KM + V+W+ + C +G++E G
Sbjct: 673 GIEQQPV-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 731
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE-TDDWSWIRIKDK 636
AA ++L D Y +L +I+ +AGRWED V+ E ++ + S I +K++
Sbjct: 732 RAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNR 791
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKL 691
V+ F D HPQS EI+ L+ L + GY L D E YHSEKL
Sbjct: 792 VHEFFARDRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKL 851
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF-VNGHCT 750
AIAFGL++ P I V+K+ +C+DCH K I +T REI VRD R H F +G C+
Sbjct: 852 AIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECS 911
Query: 751 CRDF 754
C D+
Sbjct: 912 CGDY 915
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 234/489 (47%), Gaps = 35/489 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ + LL+ C+ L+ +H IVK G ++ + +LV +Y KC ++++A
Sbjct: 22 IPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAA 81
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LE--AGNYPTNVTLGTALTACSSL 188
F L + +W +LI+ S P ++ M LE A N P +T+ L A +S
Sbjct: 82 FSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIASG 138
Query: 189 ESIRL------GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+ + +H + E D V +L Y CG + SA++ F+RI+ +++
Sbjct: 139 DPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLI 198
Query: 243 SWTTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W I AC N E + L +M EG+ PN + +I S CG SL + +H+
Sbjct: 199 CWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHAR 258
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+LG+ ++ V +++ +Y +CG VDE+ +F+ M+ N V+WNAMIA AQ
Sbjct: 259 VEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ------- 311
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ--IHALTLKTGF 419
H + A +I+ ++ G +P+ TF + L + + GE +H G
Sbjct: 312 --CGHR--SAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGL 367
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV+VGTALV MY G I+RA F + + ++SW +M+T + ++ + +A++LF
Sbjct: 368 EGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAA 427
Query: 480 MLLAGVRPNQVTFVGALAAC---SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
M + PN+V+++ L C S A ++ + + +E I ++ MF
Sbjct: 428 MKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIAN------GVVRMFA 481
Query: 537 RLGCIEEAF 545
R G +EEA
Sbjct: 482 RSGSLEEAM 490
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 237/529 (44%), Gaps = 26/529 (4%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
+ A I+H I + +D FV T L++ YGKCG +E A +VF + +++ W + I
Sbjct: 148 AQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIMAC 207
Query: 151 VQNSQ-PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
N + P+ A+ + M G P + L++C S+ L + IHA V + D
Sbjct: 208 AGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGD 267
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V +L ++Y CGS++ +I F + +N +SW +I A + G + +M
Sbjct: 268 VVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQ 327
Query: 270 EGIQPNEFT-LTSISSVC-GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
EG +PN+ T +T++ + C + L A +H G ++ V +++ +Y G +
Sbjct: 328 EGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAI 387
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKP 386
D A+ FD + N+V+WNAM+ + NG EA+ +F+ + + P
Sbjct: 388 DRARAAFDAIPAKNIVSWNAMLTAYGD------------NGRAREAMELFAAMKRQSLAP 435
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRIERASRV 445
+ ++ ++L C + + IHA + G F + + +V M+ + G +E A
Sbjct: 436 NKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAA 492
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + +SW + + + H A+ F M G RP++ T V + C++ G +
Sbjct: 493 FDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTL 552
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG-CIEEAFDFIKKM-DFEPNEVIWSVF 563
+ + +++ + +++M + G ++E +M D + V W+
Sbjct: 553 ELGRSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTM 612
Query: 564 IAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
IA +HG+ F +Q ++P D ++ +L AG ED
Sbjct: 613 IAAYAQHGHGRKALKLFRIMQQRSSVRP-DSSTFVSVLSGCSHAGLVED 660
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 207/468 (44%), Gaps = 47/468 (10%)
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+Y TL L C + G+Q+H +VK + +GN L +YS C SL+ A
Sbjct: 20 DYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDAN 79
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
AF+ +R + + +W T+I A +++M E N +I +V G +
Sbjct: 80 AAFSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIA 136
Query: 291 S--------LRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
S R A++ I+ +L V +++ Y KCG V+ A ++F + +
Sbjct: 137 SGDPSSSSSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPD 196
Query: 342 LVTWNAMI---AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
L+ WNA I AG+ + D AL + ++ G+ P+ +F +IL+ C
Sbjct: 197 LICWNAAIMACAGNDERPD-------------RALLLVRRMWLEGLLPNRASFVAILSSC 243
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+L IHA + GFL DVVV TALV MY +CG ++ + VF M+ R +SW
Sbjct: 244 GDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWN 303
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL-AACSNAGMVYEALGYFEMMQK 517
+MI FA A ++ M G RPN++TFV AL AACS++ + LG +
Sbjct: 304 AMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSS---QDLGESAALHG 360
Query: 518 EYKIKPVMDHYM---CLIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ M L+ M+ G I+ AFD I + + + + R
Sbjct: 361 WIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRARE 420
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
MEL +AA + L P A+L G EDV+ +++ E
Sbjct: 421 AMEL--FAAMKRQSLAPNKVSYLAVL-------GCCEDVSEARSIHAE 459
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/666 (32%), Positives = 357/666 (53%), Gaps = 26/666 (3%)
Query: 103 TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
+GS + +L+++Y KC A KVFD++P NVVSWT+L+SG+V N ++ +
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSL 457
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F +M G YP T T L AC L ++ G QIH + +K E VGNSL +YS
Sbjct: 458 FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ--PNEFTLT 280
CG +N A K F + ++++SW +I G + L F M I+ P+EFTLT
Sbjct: 518 CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
S+ C + + G Q+H ++ G+ S+ + S++ LY+KCG + A+K FD +
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+++W+++I G+AQ D EA+ +F +L + D + SSI+ +
Sbjct: 638 EKTMISWSSLILGYAQEGDF-----------VEAMGLFKRLQELSSQIDSFVLSSIIGVF 686
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ L+QG+Q+ AL +K + V +LV+MY KCG ++ A + F EM + +ISWT
Sbjct: 687 ADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWT 746
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
MITG+ H L +A+ +F ML + P++V ++ L+ACS++GM+ E F + +
Sbjct: 747 VMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLET 806
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
IKP ++HY C++D+ R G ++EA + M +PN IW ++ CR HG++ELG
Sbjct: 807 QGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 866
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
+ LL++ K+ +Y M+ +++ AG W + + L + L + SW+ I+ +V+
Sbjct: 867 VGKILLRIDGKNPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVH 926
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAK-----CFGYKQQESFELTDE--ESASVYHSEKL 691
F+ + HP + I + L E+ + + +G K E ++ DE E HSEKL
Sbjct: 927 FFRSGEDSHPLTLVIQETLKEVERRLREELGYVYGLK-HELHDIDDESKEENLRAHSEKL 985
Query: 692 AIAFGLLNTPIVSP---ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
AI L + I V K+ +C DCH FIK ++ +T +VRD+ R H F +G
Sbjct: 986 AIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGC 1045
Query: 749 CTCRDF 754
C+C D+
Sbjct: 1046 CSCGDY 1051
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 215/411 (52%), Gaps = 21/411 (5%)
Query: 62 ALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
+LS+ TE G ++ + L+ C +L IH +K G V LV+
Sbjct: 454 SLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVD 513
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA--GNYPTN 175
+Y KCG + EA+KVF + +++SW ++I+GYV A+ F M EA P
Sbjct: 514 MYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDE 573
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
TL + L ACSS I GKQIH ++V+ + ++ SL LY CG+L SA KAF
Sbjct: 574 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAF 633
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
++I+EK ++SW+++I + G+ V+ + F ++ Q + F L+SI V L+
Sbjct: 634 DQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQ 693
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+ +L +KL V NS++ +YLKCGLVDEA+K F M ++++W MI G+
Sbjct: 694 QGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYG 753
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ H G +A+SIF+K+ ++PD + ++L+ CS +++GE++ +
Sbjct: 754 K-----------HGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSK 802
Query: 414 TLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
L+T G V +V++ + GR++ A + M + + W ++++
Sbjct: 803 LLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLS 853
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 5/196 (2%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + + A +VK S + V LV++Y KCG ++EA+K F + +V+SWT +I+G
Sbjct: 692 LQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITG 751
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
Y ++ + A+ +F ML P V L+ACS I+ G+++ + +++ Q
Sbjct: 752 YGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQG-IK 810
Query: 210 TSVGNSLC--SLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSK 266
V + C L G L A + + K NV W T++ C +G+ G
Sbjct: 811 PRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKI 870
Query: 267 MLS-EGIQPNEFTLTS 281
+L +G P + + S
Sbjct: 871 LLRIDGKNPANYVMMS 886
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/712 (30%), Positives = 383/712 (53%), Gaps = 28/712 (3%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P+ +L A+ L G + ++ +L+ C +L HA ++K G D +
Sbjct: 101 PLDALAAYRAM--LDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTA 158
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM---LEA 169
LV +Y K G + +A++VFD +P ++VSW +++ GYV N LA+ F +M L+
Sbjct: 159 NSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQV 218
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G+ +V + AL AC ++ LG++IH Y +++ E D VG SL +Y CG++ A
Sbjct: 219 GH--DSVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFA 276
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F ++ + V++W +IG N V F +M +G Q T ++ + C
Sbjct: 277 ENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQT 336
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
S G VH+ ++ + ++ + +++ +Y K G V+ ++K+F ++ LV+WN MI
Sbjct: 337 ESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMI 396
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
A + M++ + EA+++F +L + + PD +T ++++ L ++ Q +Q
Sbjct: 397 AAY-MYMEMYQ----------EAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H+ +K G+ ++ A+++MY +CG I + +F +M + +ISW ++I G+A H
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQ 505
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
AL++F++M +G+ PN+ TFV L ACS +G+ E F MQ+EY + P ++HY
Sbjct: 506 GKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYG 565
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C+ D+ R G + E FI+ M P IW + R ++++ YAAE++ +L+
Sbjct: 566 CMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHN 625
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+ Y +L ++ AGRWEDV +++L +E+ L T+ S + + +K SF D HPQ
Sbjct: 626 NTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQ 685
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEE----SASVY---HSEKLAIAFGLLNTPI 702
S +I + D L ++ G S L D + S +V HS +LA+AFGL+++
Sbjct: 686 SEKIHEFSDIL---SRNIGEDLDSSSNLRDSDPFASSTTVLPNKHSVRLAVAFGLISSEA 742
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
SP+LV K+ +C CH+ +K+I+ + R+I+V D+K H F +G C C D+
Sbjct: 743 GSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHIFSDGSCCCGDY 794
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 218/466 (46%), Gaps = 34/466 (7%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G M+EA F + R +I G+ P A+ + ML+AG P T L
Sbjct: 68 GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
C+ ++ G+ HA V+K D NSL +LY+ G + A + F+ + ++++
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML--SLRVGAQVHS 300
SW T++ NG L F +M ++ +Q ++ I+++ L +L +G ++H
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREM-NDALQVGHDSVGVIAALAACCLESALALGREIHG 246
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
I+ G +++V S++ +Y KCG V A+ +F M +VTWN MI G+A
Sbjct: 247 YAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYA------- 299
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
+ +A F ++ G + ++ T ++LT C++ + G +HA ++ FL
Sbjct: 300 ----LNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFL 355
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
VV+ TAL+ MY K G++E + ++F +++ +TL+SW +MI + + +A+ LF ++
Sbjct: 356 PHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLEL 415
Query: 481 LLAGVRPNQVT---------FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
L + P+ T +G++ C LGY + +M+ M
Sbjct: 416 LNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTL-------IMNAVM-- 466
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
M+ R G I + + KM + + + W+ I G HG ++
Sbjct: 467 -HMYARCGNIVASREIFDKMPGK-DVISWNTIIIGYAIHGQGKIAL 510
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 14/288 (4%)
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
SL + G ++ A AF + +I + + L + ML G +P
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ FT + C +L G H+ IKLG +++ NS++ LY K GLV +A+++F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSS-GMKPDLYTFS 392
DGM ++V+WN M+ G+ NG G AL+ F ++N + + D
Sbjct: 179 DGMPARDIVSWNTMVDGYVS------------NGMGALALACFREMNDALQVGHDSVGVI 226
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ L C AL G +IH ++ G DV VGT+LV+MY KCG + A VF +M R
Sbjct: 227 AALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLR 286
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
T+++W MI G+A + A F M + G + VT + L AC+
Sbjct: 287 TVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACA 334
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 130/237 (54%), Gaps = 2/237 (0%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N PV + F + + +G +V+ + ++LL C +S +HA++V+
Sbjct: 301 NERPVDA--FDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHV 358
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ T L+ +YGK G +E ++K+F + +VSW ++I+ Y+ + AI +FL++L
Sbjct: 359 VLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQ 418
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
YP T+ T + A L SIR KQ+H+Y+VK D T + N++ +Y+ CG++ ++
Sbjct: 419 PLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVAS 478
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ F+++ K+V+SW T+I +G+ L F +M G++PNE T S+ + C
Sbjct: 479 REIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTAC 535
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 179/425 (42%), Gaps = 51/425 (12%)
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ ++ G +DEA F G++ N MI G A DL D L+A+ +A
Sbjct: 59 SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADA-DLPLDALAAYRAMLDA--- 114
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
G +PD +TF +L C+R AL +G HA +K G +DV +LV +Y K
Sbjct: 115 -------GARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAK 167
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQVTFVG 494
G + A RVF M R ++SW +M+ G+ ++ + AL F +M A V + V +
Sbjct: 168 LGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIA 227
Query: 495 ALAAC---SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
ALAAC S + E GY E +K L+DM+ + G + A + KM
Sbjct: 228 ALAACCLESALALGREIHGYAIRHGLEQDVKVGTS----LVDMYCKCGNVFFAENVFAKM 283
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
V W+ I G YA L +P D ++ + + V + E V
Sbjct: 284 PLR-TVVTWNCMIGG-----------YA----LNERPVD--AFDCFMQMRVDGFQVEVVT 325
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
+ LT + + + F P+ L E++ + ++ K FG
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385
Query: 672 QESF-ELTDEESASVY---HSEKLAIAFGLLNTP----------IVSPILVVKSTTMCRD 717
++ + +A +Y + E +A+ LLN P +V +++ S C+
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445
Query: 718 CHNFI 722
H++I
Sbjct: 446 MHSYI 450
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 345/645 (53%), Gaps = 49/645 (7%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ Y CG + +FD +P+ NVV + +I YV N A+ VF +M G P
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T L A S E + +G QIHA VV+ + + VGN L S+Y CG L A + +
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ ++V+SW +++ C NG+ L +M G++P+ GTM SL
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDA----------GTMASL-- 244
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
L +N + N V +++F +++ +LV+WN MIA +
Sbjct: 245 ----------LPAVTNTCLDN-----------VSFVKEMFMKLANKSLVSWNVMIAVYMN 283
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ EA+ IF ++ + PD + +S+L C L AL G +IH
Sbjct: 284 -----------NSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYV 332
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++ ++++ AL++MY KCG +E A VF +M R ++SWTSMI+ + + A+
Sbjct: 333 VRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAV 392
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF M G+ P+ + FV L+ACS+AG++ E YF++M +E KI P ++H++C++D+
Sbjct: 393 SLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDL 452
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++EA+ FIK+M EPNE +W ++ CR + NM +G AA+QL +L P+ Y
Sbjct: 453 LGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYY 512
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ AGRWEDV V+++ + + + + S + ++V++F D HPQS +I+
Sbjct: 513 VLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIY 572
Query: 655 KVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVV 709
+ LD V K K GY + E D+E HSEKLAIAF +LNT SPI +
Sbjct: 573 EELDVSVGKMKEAGYVPETDSALHDVEEEDKECHLAVHSEKLAIAFAILNTAPGSPIRIT 632
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K+I+ + REI +RD+ R H F NG C+C D+
Sbjct: 633 KNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDY 677
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 51/358 (14%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA +V+ G + FV L+++YGKCG + EA +V D +P +VVSW SL++G +N Q
Sbjct: 159 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQ 218
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSS--LESIRLGKQIHAYVVKYQTEDDTSVG 213
+ A+ V +M G P T+ + L A ++ L+++ K++
Sbjct: 219 FDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEM---------------- 262
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
F ++ K+++SW +I N + + F +M +
Sbjct: 263 -------------------FMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVD 303
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ ++ S+ CG + +L +G ++H ++ NL + N+++ +Y KCG ++ A+++
Sbjct: 304 PDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREV 363
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFS 392
FD M ++V+W +MI+ + NG G +A+S+FS++ G+ PD F
Sbjct: 364 FDQMKFRDVVSWTSMISAYGM------------NGKGRDAVSLFSRMQDLGLNPDSIAFV 411
Query: 393 SILTICSRLVALEQGEQIHAL-TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
S+L+ CS L++G L T + + + +V++ + G+++ A +M
Sbjct: 412 SVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQM 469
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 193/435 (44%), Gaps = 52/435 (11%)
Query: 190 SIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
I+ K++H+ + + + + S+G L Y+ CG S F+ I +KNV+ + +I
Sbjct: 50 DIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMI 109
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ N L F M GI P+ +T + L VG Q+H+ +++G
Sbjct: 110 RSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLD 169
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N+ V N ++ +Y KCG + EA ++ D M ++V+WN+++AG A NG
Sbjct: 170 LNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAG------------CARNG 217
Query: 369 G-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+AL + ++ G+KPD T +S+L V T
Sbjct: 218 QFDDALEVCKEMELLGLKPDAGTMASLLP--------------------------AVTNT 251
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
L N + +F++++ ++L+SW MI + N+S+ +A+ +F M V P
Sbjct: 252 CLDN-------VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 304
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ ++ L AC + + E + ++ +++P + LIDM+ + GC+E A +
Sbjct: 305 DAISIASVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYAREV 363
Query: 548 IKKMDFEPNEVIWSVFIA--GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+M F + V W+ I+ G G + ++ Q L L P D ++ +L AG
Sbjct: 364 FDQMKFR-DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNP-DSIAFVSVLSACSHAG 421
Query: 606 RWEDVAVVKNLTREE 620
++ L EE
Sbjct: 422 LLDEGRYYFKLMTEE 436
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S S+L C + +L IH ++V+ + + L+++Y KCG +E A++VFD +
Sbjct: 308 SIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 367
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSWTS+IS Y N + A+ +F M + G P ++ + L+ACS + G+
Sbjct: 368 KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 427
Query: 196 QIHAYVVKYQTEDDTSVGN-----SLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIG 249
Y K TE+ V + L G ++ A ++ E N W ++
Sbjct: 428 ----YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLS 483
Query: 250 ACGENGEAVQGL 261
AC + GL
Sbjct: 484 ACRVYSNMIIGL 495
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 240/716 (33%), Positives = 387/716 (54%), Gaps = 39/716 (5%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
++L EG + + VS+L + E IH + KTG +D V T ++N Y K
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272
Query: 124 NM-EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF-LDMLEAGNYPTNVTLGTA 181
NM + A K F+ + N +W+++I+ Q + + A V+ D L++ P+ ++ T
Sbjct: 273 NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS--VPSRTSMLTG 330
Query: 182 LTACSSLESIR-LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L ++ + L QIH E + N++ + Y ++ A FNR+ +N
Sbjct: 331 LARYGRIDDAKILFDQIH--------EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRN 382
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW +I NG + Q L + +G+ P+ +LTS C + +L G QVHS
Sbjct: 383 TISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHS 442
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDL 358
L +K G N V N+++ LY K + +++FD M+ + V++N+ ++ Q + D
Sbjct: 443 LAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDE 502
Query: 359 AKDDL------------------SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
A+D + + G EA+ IF + P+ + +L +
Sbjct: 503 ARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGN 562
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
L A + G+QIH + +K G S +VV ALV+MY KC + + +VF M R + +W ++
Sbjct: 563 LGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTI 621
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
ITG+A H L +A+++++ M+ AGV PN+VTFVG L ACS++G+V E +F+ M +Y
Sbjct: 622 ITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYG 681
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
+ P+++HY C++D+ R G ++ A FI M EP+ VIWS + C+ H N+E+G AA
Sbjct: 682 LTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAA 741
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
E+L ++P + +Y ML +I+ S G W++VA V+ L +E +++ SW++IK+K++SF
Sbjct: 742 EKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSF 801
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAF 695
D H Q I+ L EL K GY F L D +ES+ +YHSEKLA+A+
Sbjct: 802 VTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAY 861
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
GLL TP PI ++K+ +C DCH FIK ++S+T REI VRD R H F NG C+C
Sbjct: 862 GLLVTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 28/405 (6%)
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
MEEA+ +F+ +P N VSWT +ISGYV Q A +F ML G P L + L+A
Sbjct: 173 MEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSA 232
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST-CGSLNSAIKAFNRIREKNVMS 243
L + + IH V K E D VG ++ + Y+ L+SA+K F + +N +
Sbjct: 233 VRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYT 292
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W+T+I A + G + + + + LT ++ + + Q+H
Sbjct: 293 WSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHE--- 349
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
N+ N+++ Y++ +VDEA+ LF+ M N ++W MIAG+A+
Sbjct: 350 -----PNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR--------- 395
Query: 364 SAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
NG +E AL L+ GM P L + +S CS + ALE G+Q+H+L +K G +
Sbjct: 396 ---NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V AL+ +Y K I ++F M+ + +S+ S ++ ++L +A +F +M
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNM-- 510
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMM--QKEYKIKPVM 525
P+ V++ ++AC+ A EA+ F M ++E P++
Sbjct: 511 --PSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPIL 553
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 204/511 (39%), Gaps = 92/511 (18%)
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
G+ G + EA++VFD++P ++++W S+I Y N P+ A D + GN T L
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPD-AGRSLADAISGGNLRTGTIL- 101
Query: 180 TALTACSSLESIRLGKQI------------HAYVVKY-QTED--------------DTSV 212
L+ + +R +++ +A V Y Q D D S
Sbjct: 102 --LSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSS 159
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
N++ + Y + A F R+ E+N +SWT +I + + F ML EG+
Sbjct: 160 WNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGM 219
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK-CGLVDEAQ 331
P + L S+ S + + +H L K G+ ++ V +I+ Y K ++D A
Sbjct: 220 TPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAV 279
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
K F+GM+ N TW+ +IA +Q + DD A S+ S+
Sbjct: 280 KFFEGMAARNEYTWSTIIAALSQAGRI--DDAFAVYQRDPLKSVPSR------------- 324
Query: 392 SSILTICSRLVALEQG----EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+S+LT +R ++ +QIH +VV A++ Y + ++ A +F
Sbjct: 325 TSMLTGLARYGRIDDAKILFDQIHE--------PNVVSWNAMITGYMQNEMVDEAEDLFN 376
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV-- 505
M R ISW MI G+A + S QAL + + G+ P+ + + ACSN +
Sbjct: 377 RMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALET 436
Query: 506 -----------------------------YEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
Y ++G + +K + Y + V
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVS-YNSFMSALV 495
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+ +EA D M P+ V W+ I+ C
Sbjct: 496 QNNLFDEARDVFNNMP-SPDVVSWTTIISAC 525
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 58/333 (17%)
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
+ G + EA+++FD M +++ WN+MI + +NG +A + S
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYC------------NNGMPDAGRSLADAISG 92
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G +L T + +L+ +R + ++ + + V A+V Y + G I A
Sbjct: 93 G---NLRTGTILLSGYARAGRVRDARRV----FDGMGVRNTVAWNAMVTCYVQNGDITLA 145
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE------------------------ 478
++F M +R + SW +M+TG+ + L +A LFE
Sbjct: 146 RKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHG 205
Query: 479 -------DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
ML G+ P Q V L+A + G ++ K + V+ L
Sbjct: 206 RAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF--YAAEQLLKLKPK 589
+ ++ A F + M NE WS IA + G ++ F Y + L K
Sbjct: 266 NGYTKDVNMLDSAVKFFEGMAAR-NEYTWSTIIAALSQAGRIDDAFAVYQRDPL-----K 319
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
S +L GR +D ++ + E +
Sbjct: 320 SVPSRTSMLTGLARYGRIDDAKILFDQIHEPNV 352
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 356/626 (56%), Gaps = 50/626 (7%)
Query: 49 GNSEPVRSLGFQ----EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
GN V+SL Q EAL +L + G +S+Y SLLQ C+N KSL +A+++HAH+
Sbjct: 31 GNDGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHM 90
Query: 101 VKTGSH-QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA 159
++T QD + LV++Y K G++ EA++VFD +P NVVSWT++I+ Y ++ + A
Sbjct: 91 IQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEA 150
Query: 160 IHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
+ F +M + G P + T + L AC+ LE + + H +VK E + VGN L +
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPACTDLEVL---GEFHDEIVKGGFESNVFVGNGLVDM 207
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
Y+ G + A + F+++ +++V+SW +I +NG L+ F ++ + T+
Sbjct: 208 YAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN-TM 266
Query: 280 TSISSVCGTM-----LSLRVGAQ--VHSLGIKLGYASNLRVR-----------------N 315
+ + CG + L ++ Q V + GY N V+ N
Sbjct: 267 MAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWN 326
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALS 374
+++ + + G V+EA KLF M N+V+WNAMIAG++Q NG E AL
Sbjct: 327 AVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQ------------NGQAENALK 374
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ MKP+ TF+ +L C+ L LEQG + H + +++GF SDV+VG LV MY
Sbjct: 375 LFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYA 434
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG IE A +VF M + S ++MI G+A + S ++L+LFE M G++P++VTFVG
Sbjct: 435 KCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVG 494
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+AC +AG+V E YF++M + Y I P M+HY C+ID+ R GC +EA D I KM +
Sbjct: 495 VLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIK 554
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P+ +W ++ CR H N++LG A+ L+ L P++ Y +L +I+ +AGRW+D+ V+
Sbjct: 555 PDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVR 614
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSF 640
N ++ K+ + SWI IK +V++F
Sbjct: 615 NRMKDRKVKKKLGCSWIVIKKQVHAF 640
>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/547 (37%), Positives = 319/547 (58%), Gaps = 18/547 (3%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N L + + G L+SAIK F+ + E+NV +W ++ + GL F +M G
Sbjct: 27 NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+EFTL S+ C + + G QVH+ +K GY NL V +S+ ++Y+K G + E +K+
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFS 392
M N+V WN +IAG+AQ NG E L +++ + SG++PD T
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQ------------NGHFEGVLDLYNMMKMSGLRPDKITLV 194
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+++ + L L QG+QIHA +K G S V V ++L++MY KCG +E + + ++
Sbjct: 195 SVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHP 254
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+ W+SMI + H +A+ LFE M G+ N VTF+ L ACS+ G+ + +G+F
Sbjct: 255 DSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFF 314
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++M ++Y +KP ++HY C++D+ R GC++EA I+ M E + VIW ++ CR H N
Sbjct: 315 KLMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRN 374
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
++ AE++L+L P+D +Y +L +I SA RW+DV+ V+ R+ + + SW+
Sbjct: 375 ADMATRTAEEILRLNPQDSATYVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLE 434
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES--FELTD---EESASVYH 687
+K++V+ F D HP S EI L EL+E+ K GY + F TD +E++ V H
Sbjct: 435 VKNRVFQFSMGDKSHPMSEEIDLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNH 494
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLAIAFGL+N P SPI V+K+ +C DCH IK+I+ + REIIVRD+ R H F +G
Sbjct: 495 SEKLAIAFGLMNIPPGSPIRVMKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHG 554
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 555 KCSCGDY 561
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 189/371 (50%), Gaps = 13/371 (3%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+N + + G+++ A KVFD + NV +W +++SG +Q E + +F +M E G
Sbjct: 27 NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P TLG+ L C+ L + GKQ+HAYV+KY E + VG+SL +Y GSL K
Sbjct: 87 PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
+R +NV++W T+I +NG L ++ M G++P++ TL S+ S + +L
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G Q+H+ IK G S + V +S++ +Y KCG ++++ K H + V W++MIA +
Sbjct: 207 FQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAY 266
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
H G EA+ +F ++ G+ + TF S+L CS E+G
Sbjct: 267 G-----------FHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFK 315
Query: 413 LTL-KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLS 470
L + K G + T +V++ + G ++ A + M ++ W ++++ H +
Sbjct: 316 LMVEKYGLKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNA 375
Query: 471 HQALQLFEDML 481
A + E++L
Sbjct: 376 DMATRTAEEIL 386
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 143/279 (51%), Gaps = 23/279 (8%)
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N+ N ++ +++ G +D A K+FD M N+ TWNAM++G Q
Sbjct: 22 NIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQF-----------EFN 70
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
L +F +++ G PD +T S+L C+ L A G+Q+HA LK G+ ++VVG++L
Sbjct: 71 ENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSL 130
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+MY K G + +V M R +++W ++I G A + L L+ M ++G+RP++
Sbjct: 131 AHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDK 190
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAF 545
+T V +++ + +++ + + E IK + + LI M+ + GC+E++
Sbjct: 191 ITLVSVISSSAELATLFQG----QQIHAE-AIKAGANSAVAVLSSLISMYSKCGCLEDSM 245
Query: 546 DFIKKMDFE-PNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+ +D E P+ V+WS IA HG E + EQ+
Sbjct: 246 KAL--LDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQM 282
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 137/274 (50%), Gaps = 2/274 (0%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C ++ + +HA+++K G + V + L ++Y K G++ E +KV +
Sbjct: 94 SVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIR 153
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVV+W +LI+G QN E + ++ M +G P +TL + +++ + L ++ G+QIH
Sbjct: 154 NVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIH 213
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
A +K +V +SL S+YS CG L ++KA + + W+++I A G +G
Sbjct: 214 AEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGE 273
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-KLGYASNLRVRNSI 317
+ + F +M EG+ N+ T S+ C G L + K G L +
Sbjct: 274 EAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCV 333
Query: 318 MYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ L + G +DEA+ + M ++V W +++
Sbjct: 334 VDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLS 367
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 10/189 (5%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + VS++ +L + IHA +K G++ V++ L+++Y KCG +E++
Sbjct: 185 GLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDS 244
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS-- 186
K + + V W+S+I+ Y + + E A+H+F M + G +VT + L ACS
Sbjct: 245 MKALLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHN 304
Query: 187 SLESIRLG---KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVM 242
L+ +G + Y +K + E T V L G L+ A + E +V+
Sbjct: 305 GLKEKGMGFFKLMVEKYGLKPRLEHYTCV----VDLLGRSGCLDEAEAMIRSMPLEADVV 360
Query: 243 SWTTVIGAC 251
W T++ AC
Sbjct: 361 IWKTLLSAC 369
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+ +++ L+N + + G ++ A +VF EM R + +W +M++G + L LF +
Sbjct: 20 MRNIMSHNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFRE 79
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M G P++ T L C+ Y + +++ Y+ V+ L M+++
Sbjct: 80 MHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGS--SLAHMYMKS 137
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
G + E IK M N V W+ IAG ++G+ E L Y ++ L+P
Sbjct: 138 GSLGEGEKVIKAMRIR-NVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRP 188
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/733 (30%), Positives = 369/733 (50%), Gaps = 86/733 (11%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA I+K+G+ D ++ L+ Y +A V ++P + S++SLI +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+I VF M G P + L C+ L + ++GKQIH + D V S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ--- 273
+Y CG + A K F+R+ +K+V++ + ++ A G + +R S+M S GI+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 274 --------------------------------PNEFTLTSISSVCGTMLSLRVGAQVHSL 301
P++ T++S+ G L +G +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 302 GIKLGYASNLRVRNSIMYLYLKCG-------------------------------LVDEA 330
IK G + V ++++ +Y K G LVD+A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 331 QKLFDGMSH----VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
++F+ +N+V+W ++IAG AQ KD EAL +F ++ +G+KP
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQN---GKD--------IEALELFREMQVAGVKP 386
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ T S+L C + AL G H ++ L +V VG+AL++MY KCGRI + VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
M T+ L+ W S++ GF+ H + + + +FE ++ ++P+ ++F L+AC G+
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E YF+MM +EY IKP ++HY C++++ R G ++EA+D IK+M FEP+ +W +
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR N++L AAE+L L+P++ +Y +L +I+ + G W +V ++N L +
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EE 681
SWI++K++VY+ D HPQ +I + +DE+ ++ + G++ F L D +E
Sbjct: 627 GCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQE 686
Query: 682 SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
HSEKLA+ FGLLNTP +P+ V+K+ +C DCH IK I+S REI +RD+ R
Sbjct: 687 QMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRF 746
Query: 742 HKFVNGHCTCRDF 754
H F +G C+C DF
Sbjct: 747 HHFKDGICSCGDF 759
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 236/549 (42%), Gaps = 98/549 (17%)
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q HA ++K ++D + L + YS N A I + + S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
Q + FS+M S G+ P+ L ++ VC + + +VG Q+H + G + V+
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLSA 365
S+ ++Y++CG + +A+K+FD MS ++VT +A++ +A+ + ++ + A
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 366 H----NG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ NG EA+ +F K++ G PD T SS+L L G IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGR-------------------------------IE 440
+K G L D V +A+++MY K G ++
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 441 RASRVFVEMSTRTL----ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
+A +F +T+ +SWTS+I G A + +AL+LF +M +AGV+PN VT L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGCIEEAFDFIKKMDF 553
AC N ALG+ ++D+ LIDM+ + G I + + M
Sbjct: 396 PACGNIA----ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFNMMP 450
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKPKDCESYAMLLDIFVSAGRWEDVA 611
N V W+ + G HG + E L+ +LKP D S+ LL G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVG------ 503
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
LT E W + ++ + Y KP E + + L+ +A K
Sbjct: 504 ----LTDE-------GWKYFKMMSEEYGIKPR-------LEHYSCMVNLLGRAG----KL 541
Query: 672 QESFELTDE 680
QE+++L E
Sbjct: 542 QEAYDLIKE 550
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/681 (31%), Positives = 366/681 (53%), Gaps = 16/681 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +V ++L+ + + A +H+ K G + FV + L++ Y C + +
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF+ + R + V WT+++S Y +N PE A VF M +G P L + L A
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVC 275
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L S+ LGK IH +K + + VG +L +Y+ CG + A AF I +V+ + +
Sbjct: 276 LPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFM 335
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I ++ + Q F +++ + PNE++L+S+ C M+ L G Q+H+ IK+G+
Sbjct: 336 ISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 395
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+L V N++M Y KC +D + K+F + N V+WN ++ G +Q
Sbjct: 396 ESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ-----------SG 444
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EALS+F ++ ++ M T+SS+L C+ ++ QIH K+ F +D V+G
Sbjct: 445 LGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN 504
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+L++ Y KCG I A +VF + R +ISW ++I+G+A H + AL+LF+ M + V
Sbjct: 505 SLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVES 564
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N +TFV L+ CS+ G+V L F+ M+ ++ IKP M+HY C++ + R G + +A F
Sbjct: 565 NDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQF 624
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I + P+ ++W ++ C H N+ LG ++AE++L+++P+D +Y +L +++ +AG
Sbjct: 625 IGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSL 684
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ VA+++ R + + SW+ IK ++++F HP I +L+ L K
Sbjct: 685 DQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSRE 744
Query: 668 GYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY + L D E+ + HSE+LA+A+GL+ TP PI ++K+ C DCH
Sbjct: 745 GYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAF 804
Query: 723 KIITSLTAREIIVRDSKRLHK 743
+I+ + REIIV + HK
Sbjct: 805 TVISKIVKREIIVIVGQGNHK 825
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 252/513 (49%), Gaps = 17/513 (3%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVY 119
+L++L P V + + LQ C+ R +H H+V+ G D F L+N+Y
Sbjct: 47 SLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMY 106
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
GK G + A+++FD +P N+VS+ +L+ + Q E A +F + G+ L
Sbjct: 107 GKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLT 166
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T L ++++ L +H+ K + + VG+ L YS C ++ A FN I K
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ + WT ++ EN R FSKM G +PN F LTS+ + S+ +G +H
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIH 286
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
IK + V +++ +Y KCG + +A+ F+ + + +++ + MI+ +AQ
Sbjct: 287 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ----- 341
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
N +A +F +L S + P+ Y+ SS+L C+ +V L+ G+QIH +K G
Sbjct: 342 ------SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 395
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
SD+ VG AL++ Y KC ++ + ++F + +SW +++ GF+ L +AL +F +
Sbjct: 396 ESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCE 455
Query: 480 MLLAGVRPNQVTFVGALAAC-SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M A + QVT+ L AC S A + + + + + + V+ + LID + +
Sbjct: 456 MQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKC 513
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G I +A + + E + + W+ I+G HG
Sbjct: 514 GYIRDALKVFQHL-MERDIISWNAIISGYALHG 545
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/691 (31%), Positives = 358/691 (51%), Gaps = 22/691 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K +S+Y + + +IH V G + + + +V +Y K +E+A+K
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLE 189
VFD +P + + W ++ISGY +N +I VF D++ E+ TL L A + L+
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+RLG QIH+ K V SLYS CG + F R+ +++++ +I
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
NGE L F +++ G + TL S+ V G ++ + +H +K + S
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLS 352
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V ++ +Y K ++ A+KLFD +L +WNAMI+G+ Q NG
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ------------NGL 400
Query: 370 TE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
TE A+S+F ++ S P+ T + IL+ C++L AL G+ +H L T F S + V TA
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+ MY KCG I A R+F M+ + ++W +MI+G+ H +AL +F +ML +G+ P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+ L ACS+AG+V E F M Y +P + HY C++D+ R G ++ A FI
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M EP +W + CR H + L +E+L +L P + + +L +I + +
Sbjct: 581 EAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
A V+ ++ KL++ ++ I I + + F D HPQ EI++ L++L K + G
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 669 YKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y+ + L D EE + HSE+LAIAFGL+ T + I ++K+ +C DCH K
Sbjct: 701 YQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTK 760
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+I+ +T R I+VRD+ R H F +G C+C D+
Sbjct: 761 LISKITERVIVVRDANRFHHFKDGVCSCGDY 791
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/546 (37%), Positives = 318/546 (58%), Gaps = 21/546 (3%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N L ++Y G L+ A F+++ ++NV+SWTT+I A + L F ML EG++
Sbjct: 4 NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN FT +S+ C + +LR Q+H IK+G S++ VR++++ +Y + G ++ A ++
Sbjct: 64 PNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M +LV W+++IAG AQ D G EAL +F ++ +G T +S
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSD-----------GDEALRLFKRMKRAGFLAQQTTLTS 169
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L C+ L LE G Q+H LK + D+++ AL++MY KCG +E A+ VFV M +
Sbjct: 170 VLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKD 227
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+ISW++MI G A + S +AL+LFE M + G++PN VT VG L ACS+AG+V E L YF
Sbjct: 228 VISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFH 287
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M++ + I P +HY C+ID+ R G + EA D I +M+ EP+ V W + CR H N+
Sbjct: 288 SMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNV 347
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
++ +AA+Q+L+L P+D +Y +L +I+ + RW DVA V+ + + SWI +
Sbjct: 348 DVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEV 407
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHS 688
++++F D HPQ EI L++L+ K GY +F L D E + YHS
Sbjct: 408 SKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHS 467
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLAI FGL++ P I + K+ +C DCH F K++ + R I++RD R H F +G
Sbjct: 468 EKLAIVFGLMSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGL 527
Query: 749 CTCRDF 754
C+C DF
Sbjct: 528 CSCGDF 533
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 182/361 (50%), Gaps = 20/361 (5%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F++ L+N+Y K G + +AQ VFD +P NVVSWT++IS Y + A+ + ML
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P T + L AC L ++R Q+H ++K + D V ++L +YS G L +A
Sbjct: 61 GVRPNMFTYSSVLRACDGLFNLR---QLHCCIIKIGLDSDVFVRSALIDVYSRWGELENA 117
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
++ F+ + +++ W+++I +N + + LR F +M G + TLTS+ C +
Sbjct: 118 LRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGL 177
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L +G QVH +K Y +L + N+++ +Y KCG +++A +F M ++++W+ MI
Sbjct: 178 ALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMI 235
Query: 350 AGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG- 407
AG AQ NG EAL +F + G+KP+ T +L CS +E+G
Sbjct: 236 AGLAQ------------NGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGL 283
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFAN 466
H++ G ++++ + GR+ A + EM ++W +++
Sbjct: 284 YYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRV 343
Query: 467 H 467
H
Sbjct: 344 H 344
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 150/287 (52%), Gaps = 7/287 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG + +Y S+L+ C L N +H I+K G D FV + L++VY + G
Sbjct: 57 MLREGVRPNMFTYSSVLRAC---DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGE 113
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E A +VFD + ++V W+S+I+G+ QNS + A+ +F M AG TL + L A
Sbjct: 114 LENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRA 173
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L + LG+Q+H +V+KY + D + N+L +Y CGSL A F R+ EK+V+SW
Sbjct: 174 CTGLALLELGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISW 231
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA-QVHSLGI 303
+T+I +NG + + L+ F M GI+PN T+ + C + G HS+
Sbjct: 232 STMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKE 291
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
G ++ L + G + EA L + M + VTW A++
Sbjct: 292 LFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALL 338
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/695 (30%), Positives = 385/695 (55%), Gaps = 35/695 (5%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SL+ C ++L +H H++ TG D + T L+ +Y KCG++++A++VF+ +
Sbjct: 35 SLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 94
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++ +W+S+I+ Y + + E+A+ ++ M+ G P VT AL C+S+ + G+ IH
Sbjct: 95 DLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 154
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++ + D + +SL ++Y C + A K F ++ +NV S+T +I A + GE
Sbjct: 155 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 214
Query: 259 QGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L FS+M E I+PN +T +I + +L G +VH G+ +N+ V+N++
Sbjct: 215 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 274
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y KCG EA+K+FD M+ N+++W +MIA +AQ H EAL++F
Sbjct: 275 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQ-----------HGNPQEALNLFK 323
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+++ ++P +FSS L C+ L AL++G +IH ++ L+ + T+L++MY +CG
Sbjct: 324 RMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAN-LASPQMETSLLSMYARCG 379
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A RVF M TR S +MI F H QAL+++ M G+ + +TFV L
Sbjct: 380 SLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLV 439
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
ACS+ +V + + + + ++ + P+++HY+C++D+ R G + +A + ++ M ++ +
Sbjct: 440 ACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADA 499
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
V W ++GC+RHG+++ G AA ++ +L P + Y L +++ +A R++D V+
Sbjct: 500 VAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEM 559
Query: 618 REEKLSETDDWSWIRIKDKVYSF------KPNDGLHPQSAE-IFKVLDELVEKAKCFGY- 669
E ++ S+I I ++++ F + +G ++ E + +L EL+E K GY
Sbjct: 560 EERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLVELLEPMKQAGYV 619
Query: 670 --------KQQESFELTDEESASVYHSEKLAIAFGLL--NTPIVS-PILVVKSTTMCRDC 718
+QQ +++ + +HSE+LAIA+GL+ P S P+ VV S +C C
Sbjct: 620 PDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGC 679
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
H+ IK+++ +T + I VRD R H F G C+C D
Sbjct: 680 HSAIKLLSDITEKRIFVRDGSRFHHFEKGACSCGD 714
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 214/407 (52%), Gaps = 17/407 (4%)
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+I+ V+ +P A+ ++ +M E G + + + AC+ L+++ G+++H +++
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D + +L +Y+ CGSL+ A + F + K++ +W+++I A G + +
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M++EG++PN T C ++ L G +H + + +++S++ +YLKC
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-SGM 384
+ EA+K+F+GM N+ ++ AMI+ + Q + A EAL +FS+++ +
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA-----------EALELFSRMSKVEAI 229
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
+P+ YTF++IL L LE+G ++H GF ++VVV ALV MY KCG A +
Sbjct: 230 EPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARK 289
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
VF M+ R +ISWTSMI +A H +AL LF+ M V P+ V+F AL AC+ G
Sbjct: 290 VFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGA 346
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
+ E + + P M+ L+ M+ R G +++A +M
Sbjct: 347 LDEGREIHHRVVEANLASPQME--TSLLSMYARCGSLDDARRVFNRM 391
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 208/408 (50%), Gaps = 22/408 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + ++ L C + L++ IH I+ + QD + L+N+Y KC
Sbjct: 122 MIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDE 181
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM--LEAGNYPTNVTLGTAL 182
M EA+KVF+ + NV S+T++IS YVQ + A+ +F M +EA P T T L
Sbjct: 182 MVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIE-PNAYTFATIL 240
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
A L ++ G+++H ++ + + V N+L ++Y CGS A K F+ + +NV+
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVI 300
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT++I A ++G + L F +M ++P+ + +S + C + +L G ++H
Sbjct: 301 SWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRV 357
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++ AS ++ S++ +Y +CG +D+A+++F+ M + + NAMIA Q
Sbjct: 358 VEANLASP-QMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQ-------- 408
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR--LVALEQGEQIHALTLKTGFL 420
H +AL I+ K+ G+ D TF S+L CS LVA + + + +L + G +
Sbjct: 409 ---HGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVA-DCRDFLQSLVMDHGVV 464
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
V +V++ + GR+ A + M + ++W ++++G H
Sbjct: 465 PLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRH 512
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 61 EALSVLTEGPKVQT-----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EAL + + KV+ ++ ++L +L +H H+ G + V L
Sbjct: 215 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 274
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V +YGKCG+ EA+KVFD++ NV+SWTS+I+ Y Q+ P+ A+++F M P+
Sbjct: 275 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSG 331
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
V+ +AL AC+ L ++ G++IH VV+ + SL S+Y+ CGSL+ A + FNR
Sbjct: 332 VSFSSALNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNR 390
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRV 294
++ ++ S +I A ++G Q LR + KM EGI + T S+ C T L
Sbjct: 391 MKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADC 450
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHA 353
+ SL + G + ++ + + G + +A++L + M + + V W +++G
Sbjct: 451 RDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCK 510
Query: 354 QMMDLAKDDLSAHN 367
+ DL + + +A
Sbjct: 511 RHGDLDRGERAARK 524
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/584 (35%), Positives = 338/584 (57%), Gaps = 22/584 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L C S +IR G+++H +++K + L LY+ C L A F+ + ++
Sbjct: 67 SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQR 126
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I A + G A + L F +ML +PN FT +I + C L G Q+H
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
S+ IK Y S++ V +S++ +Y K G + +A +F + ++V A+I+G+AQM
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQM---G 243
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
D+ EAL +F +L GM + T++S+LT S L AL G+Q+H+ L++G
Sbjct: 244 LDE--------EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQ 295
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
S VV+ +L++MY KCG + A R+F M RT ISW +M+ G++ H ++ + L+LF+
Sbjct: 296 YSYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKL 355
Query: 480 MLLAG-VRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMF 535
M V+P+ +T++ L+ CS+ + E +G ++ M+ + I+P + HY C++D+
Sbjct: 356 MREENKVKPDSITYLAVLSGCSHGQL--EDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLL 413
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G +EEAFDFIKKM F P IW + CR H ++E+G ++LL+L+P++ +Y
Sbjct: 414 GRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYV 473
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L +++ SAG+WED+ +++L +E+ +++ SW+ + V++F +D HP+ E+
Sbjct: 474 ILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAN 533
Query: 656 VLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
+ EL K K GY S L D +E + HSEKLA+AFGL+ TP + I V+K
Sbjct: 534 KVKELSIKFKEDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIK 593
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+F K ++ L AR +I+RD R H V G C+C D+
Sbjct: 594 NLRICVDCHSFAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDY 637
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 209/404 (51%), Gaps = 15/404 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G +V+ Y S+L ECV+++++ + +H H++KT ++ T L+ +Y KC + +A
Sbjct: 57 GREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDA 116
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD +P+ NVVSWT++IS Y Q A+++F++ML + P + T T LT+C
Sbjct: 117 RGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGS 176
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
G+QIH+ +K E VG+SL +Y+ G + A F+ + E++V++ T +I
Sbjct: 177 LGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAII 236
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G + L+ F ++ EG+ N T S+ + + +L G QVHS ++ G
Sbjct: 237 SGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQY 296
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + + NS++ +Y KCG V A+++FD M ++WNAM+ G+ S H
Sbjct: 297 SYVVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGY-----------SKHGM 345
Query: 369 GTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQI--HALTLKTGFLSDVVV 425
E L +F + +KPD T+ ++L+ CS + G +I + + K G D+
Sbjct: 346 AREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGH 405
Query: 426 GTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHS 468
+V++ + GR+E A +M T W S++ HS
Sbjct: 406 YGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRVHS 449
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ SIL C A+ +G+++H +KT +L V + T L+ +Y KC + A +F EM
Sbjct: 65 YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R ++SWT+MI+ ++ + +AL LF +ML + PN TF L +C Y +LG
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC------YGSLG 178
Query: 511 YFEMMQ-KEYKIKPVMDHYM----CLIDMFVRLGCIEEA 544
+ Q IK + +M L+DM+ + G I +A
Sbjct: 179 FETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDA 217
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 109/218 (50%), Gaps = 10/218 (4%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + EG + +Y S+L +L++ + +H+H++++G + ++ L
Sbjct: 246 EEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSL 305
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PT 174
+++Y KCGN+ A+++FD++P +SW +++ GY ++ + +F M E P
Sbjct: 306 IDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPD 365
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
++T L+ CS + +G +I +V + + +G+ C + G +AF+
Sbjct: 366 SITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGC-VVDLLGRAGRVEEAFD 424
Query: 235 RIREKNVMS----WTTVIGACGENGEAVQGLRFFSKML 268
I++ + W +++G+C + + G+ K+L
Sbjct: 425 FIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLL 462
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/590 (34%), Positives = 330/590 (55%), Gaps = 18/590 (3%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
E++H VK+G FV + L+++Y K G +E+ +VF + + NVVSWT++I+G V
Sbjct: 176 GELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVH 235
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
A+ F +M + + T AL A + + GK IH +K ++ + V
Sbjct: 236 AGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFV 295
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
N+L ++Y+ CG + ++ F +++ +V+SWTT+I + GE + F +M +
Sbjct: 296 INTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNV 355
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
PN++T ++ S C + + G Q+H ++LG L V NSI+ LY K GL+ A
Sbjct: 356 SPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASL 415
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEALSIFSKLNSSGMKPDLYT 390
+F G++ ++++W+ +IA ++Q GG EA S + G KP+ +
Sbjct: 416 VFHGITRKDIISWSTIIAVYSQ-------------GGYAKEAFDYLSWMRREGPKPNEFA 462
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
SS+L++C + LEQG+Q+HA L G + +V +AL++MY KCG +E AS++F M
Sbjct: 463 LSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMK 522
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+ISWT+MI G+A H S +A+ LFE + G++P+ VTF+G L ACS+AGMV
Sbjct: 523 INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFY 582
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YF +M EY+I P +HY C+ID+ R G + EA I+ M ++V+WS + CR H
Sbjct: 583 YFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVH 642
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
G+++ G + AEQLL+L P ++ L +I+ + GRW++ A ++ L + + + + WSW
Sbjct: 643 GDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSW 702
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
+ + DK+ +F D HPQS I VL+ L + G +QE L D+
Sbjct: 703 VNVNDKLNAFVAGDQAHPQSEHITTVLELL---SANIGDARQEIRSLNDD 749
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/327 (35%), Positives = 185/327 (56%), Gaps = 11/327 (3%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L+ + L + + IH +K G + FV+ L +Y KCG + ++F+ + +V
Sbjct: 265 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDV 324
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSWT+LI+ YVQ + E A+ F M ++ P T ++AC++L + G+QIH +
Sbjct: 325 VSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGH 384
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
V++ D SV NS+ +LYS G L SA F+ I K+++SW+T+I + G A +
Sbjct: 385 VLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEA 444
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
+ S M EG +PNEF L+S+ SVCG+M L G QVH+ + +G V ++++ +
Sbjct: 445 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISM 504
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG V+EA K+F+GM N+++W AMI G+A+ H EA+++F K++
Sbjct: 505 YSKCGSVEEASKIFNGMKINNIISWTAMINGYAE-----------HGYSQEAINLFEKIS 553
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQG 407
S G+KPD TF +LT CS ++ G
Sbjct: 554 SVGLKPDYVTFIGVLTACSHAGMVDLG 580
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 223/484 (46%), Gaps = 42/484 (8%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLG 179
K G + +++ +FD + + +SWT+LI+GYV S A+ +F +M ++ G +
Sbjct: 102 KQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMIS 161
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
AL AC +I G+ +H + VK + V ++L +Y G + + F ++ ++
Sbjct: 162 VALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKR 221
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I G ++ L +FS+M + + T L G +H
Sbjct: 222 NVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIH 281
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK G+ + V N++ +Y KCG D +LF+ M ++V+W +I + Q
Sbjct: 282 TQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQ----- 336
Query: 360 KDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
G E A+ F ++ S + P+ YTF+++++ C+ L + GEQIH L+ G
Sbjct: 337 -------KGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLG 389
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ + V ++V +Y K G ++ AS VF ++ + +ISW+++I ++ + +A
Sbjct: 390 LVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLS 449
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC-------- 530
M G +PN+ L+ C + ++ + K V H +C
Sbjct: 450 WMRREGPKPNEFALSSVLSVCGSMALLEQG-------------KQVHAHVLCIGIDHEAM 496
Query: 531 ----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL--L 584
LI M+ + G +EEA M N + W+ I G HG + E++ +
Sbjct: 497 VHSALISMYSKCGSVEEASKIFNGMKIN-NIISWTAMINGYAEHGYSQEAINLFEKISSV 555
Query: 585 KLKP 588
LKP
Sbjct: 556 GLKP 559
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 172/358 (48%), Gaps = 51/358 (14%)
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N+ NS + +K G + +++ +FD M+H + ++W +IAG+ D
Sbjct: 89 NMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASD-----------S 137
Query: 370 TEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL +FS + G++ D + S L C V + GE +H ++K+G ++ V V +A
Sbjct: 138 YEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSA 197
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY K G+IE+ RVF +M+ R ++SWT++I G + + +AL F +M ++ V +
Sbjct: 198 LIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYD 257
Query: 489 QVTFVGALAACSNAGMVYE-----------------------ALGYFEMMQKEYKIK--- 522
TF AL A +++ +++ A Y + + +Y ++
Sbjct: 258 SHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFE 317
Query: 523 ----PVMDHYMCLIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
P + + LI +V+ G E EAF ++K + PN+ ++ I+ C +
Sbjct: 318 KMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKW 377
Query: 576 GFYAAEQLLKLKPKDCESYA-MLLDIFVSAGRWEDVAVV-KNLTREEKLSETDDWSWI 631
G +L+L D S A ++ ++ +G + ++V +TR++ +S WS I
Sbjct: 378 GEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIIS----WSTI 431
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 12/224 (5%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA L+ EGPK + S+L C + L + +HAH++ G + V + L
Sbjct: 442 KEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSAL 501
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG++EEA K+F+ + N++SWT++I+GY ++ + AI++F + G P
Sbjct: 502 ISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDY 561
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSA---IK 231
VT LTACS + LG + +YQ + L G L+ A I+
Sbjct: 562 VTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIR 621
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ + V W+T++ +C +G+ +G ++L + PN
Sbjct: 622 SMPCYTDDVV--WSTLLRSCRVHGDVDRGRWTAEQLLR--LDPN 661
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 367/677 (54%), Gaps = 24/677 (3%)
Query: 89 SLSNAEIIHAHIVKTGS-HQDFF---VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWT 144
S+S + HA +++T H F +++FL G++ A+K+F + +
Sbjct: 23 SISKTKQAHALLLRTHLLHNPLFSSKLISFLA--LSHSGDLNYARKLFTQMQNPDPFICN 80
Query: 145 SLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
++I GY ++ P A+ ++ M+E G N T L AC+ L +++LG++ H V+K
Sbjct: 81 TMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKN 140
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
D V N+L Y CGS A F+ ++V++W +I A G + +
Sbjct: 141 GFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLL 200
Query: 265 SKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+M + ++P+E T+ S+ C + +L G +HS +LG NLRV N+I+ +Y K
Sbjct: 201 DEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCK 260
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
C ++ AQ++F+ + ++++W +M++G L+ EAL++F K+ +
Sbjct: 261 CDDIESAQEVFNRIREKDVLSWTSMLSG-----------LAKSGYFQEALALFQKMQLNK 309
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
++ D T +L+ C++ AL+QG+ IH L K D+V+ TALV+MY KCG I+ A
Sbjct: 310 IELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLAL 369
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+VF M R + +W ++I G A H A+ LF+ M + P+ VTF+ L ACS+AG
Sbjct: 370 QVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAG 429
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+V E L F+ M+ +++I+P M+HY C++D+ R +++A FI+ M + N V+W+
Sbjct: 430 LVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATL 489
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
+ CR G+ +L ++++L+P C Y ML +++ +W+ ++ + + +
Sbjct: 490 LGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIE 549
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES----FELTD 679
+T SWI + ++ F D H Q+ +I+ +++E+ + G + F++ +
Sbjct: 550 KTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDGGHVPGTANVLFDIEE 609
Query: 680 EES--ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRD 737
EE + HSEKLAIA GL++TP SPI +VK+ +C DCH+F+K+ + + REI+ RD
Sbjct: 610 EEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCHSFLKVTSKVYNREIVARD 669
Query: 738 SKRLHKFVNGHCTCRDF 754
R H F G C+C DF
Sbjct: 670 RSRFHHFKEGSCSCMDF 686
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 179/358 (50%), Gaps = 16/358 (4%)
Query: 55 RSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
RS EA+S+ + G V +Y +L C ++ H ++K G D F
Sbjct: 88 RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V+ L+ Y CG+ A VFD +VV+W +I+ ++ E A + +M +
Sbjct: 148 VINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLD 207
Query: 171 NY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
N P VT+ + + AC+ L ++ GK +H+Y + +++ V N++ +Y C + SA
Sbjct: 208 NLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ FNRIREK+V+SWT+++ ++G + L F KM I+ +E TL + S C
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQT 327
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+L G +H L K +L + +++ +Y KCG +D A ++F M N+ TWNA+I
Sbjct: 328 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALI 387
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
G L+ H G +A+S+F ++ + PD TF ++L CS +++G
Sbjct: 388 GG-----------LAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 144/299 (48%), Gaps = 7/299 (2%)
Query: 60 QEALSVLTEGPKVQT-----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++A +L E K+ + VSL+ C +L + +H++ + G ++ V
Sbjct: 194 EKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNA 253
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++++Y KC ++E AQ+VF+ + +V+SWTS++SG ++ + A+ +F M
Sbjct: 254 ILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELD 313
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+TL L+AC+ ++ GK IH + K++ D + +L +Y+ CGS++ A++ F
Sbjct: 314 EITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFR 373
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R+R +NV +W +IG +G + F +M + + P++ T ++ C +
Sbjct: 374 RMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDE 433
Query: 295 G-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
G A ++ K + ++ L + VD+A + M N V W ++
Sbjct: 434 GLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGA 492
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 59 FQEALSVLTEGP----KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQEAL++ + ++ + V +L C +L + IH I K + D + T
Sbjct: 295 FQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETA 354
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCG+++ A +VF + NV +W +LI G + E AI +F M P
Sbjct: 355 LVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPD 414
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+VT L ACS + G A K+Q E + L ++ A+
Sbjct: 415 DVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFI 474
Query: 234 NRIREK-NVMSWTTVIGACGENG 255
+ K N + W T++GAC G
Sbjct: 475 ENMPIKANSVLWATLLGACRSGG 497
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/675 (33%), Positives = 368/675 (54%), Gaps = 40/675 (5%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYG--KCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
E +HA +KT FV + L+ +Y K ++ A+ +FD + R +++ W ++I YV
Sbjct: 30 EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+N I +F +++ P N TL + C+ L ++ GKQIH +K D
Sbjct: 90 ENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V SL ++YS CG ++ A K F+ + +K+V+ W ++I GE L+ F +M
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM---- 204
Query: 272 IQPNEFTLTSIS---SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+ + F+ T + S CG + S R L ++ NL N+++ Y+K G D
Sbjct: 205 PERDAFSWTVLVDGLSKCGKVESAR------KLFDQMP-CRNLVSWNAMINGYMKSGDFD 257
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGH---AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
A +LF M +LVTWN MIAG+ Q MD A+ +F + G +
Sbjct: 258 SALELFYQMPIWDLVTWNLMIAGYELNGQFMD--------------AVKMFFMMLKLGSR 303
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P T S+L+ S L L +G IH+ K GF D ++GT+L+ MY KCG IE A V
Sbjct: 304 PSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTV 363
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + + + WT++I G H +++ AL LF +M G++PN + F+G L AC++AG+V
Sbjct: 364 FRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLV 423
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+ YF+MM EYKI+P ++HY CL+D+ R G +EEA + I+ M PN+VIW +
Sbjct: 424 DDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLG 483
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
G R HG +++G YAA++++++ P+ Y +L +++ ++G WE V+ V+ + + +
Sbjct: 484 GSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKD 543
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL------TD 679
S + K ++ F D HPQ+ EI+ + E+ EK KC G+ + L +
Sbjct: 544 PGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKE 603
Query: 680 EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
+E+ HSE+LAIAFGL+N PI ++K+ +C DCH+ K+++ + +REIIVRD+
Sbjct: 604 KEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNC 663
Query: 740 RLHKFVNGHCTCRDF 754
R H F NG C+C D+
Sbjct: 664 RFHHFKNGSCSCMDY 678
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 182/392 (46%), Gaps = 23/392 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+++ C + + IH +K G D FV LVN+Y KCG ++ A+KVFD + +
Sbjct: 118 VIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKD 177
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR-LGKQIH 198
VV W SLI GY + + ++A+ +F +M E + V L L+ C +ES R L Q+
Sbjct: 178 VVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTV-LVDGLSKCGKVESARKLFDQMP 236
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ N++ + Y G +SA++ F ++ ++++W +I NG+ +
Sbjct: 237 C--------RNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFM 288
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
++ F ML G +P+ TL S+ S + L G +HS K G+ + + S++
Sbjct: 289 DAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLI 348
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG ++ A +F + + W A+I G L H AL++F +
Sbjct: 349 EMYAKCGCIESALTVFRAIQKKKVGHWTAIIVG-----------LGIHGMANHALALFLE 397
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCG 437
+ +G+KP+ F +L C+ ++ G Q + + + + LV++ + G
Sbjct: 398 MCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAG 457
Query: 438 RIERASRVFVEMS-TRTLISWTSMITGFANHS 468
+E A M + + W S++ G NH
Sbjct: 458 HLEEAKNTIENMPISPNKVIWMSLLGGSRNHG 489
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMY--KKCGRIERASRVFVEMSTRTLISWT 458
L A ++ EQ+HA +LKT + V + L+ +Y K + A +F + R+LI W
Sbjct: 23 LCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWN 82
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
++I + + SH + LF + L+ P+ T + C+ G+V E ++
Sbjct: 83 TIIKCYVENQFSHDGIVLFHE-LVHEYLPDNFTLPCVIKGCARLGVVQEGK---QIHGLA 138
Query: 519 YKIKPVMDHYM--CLIDMFVRLG---CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
KI D ++ L++M+ + G C + FD + D V+W+ I G R G +
Sbjct: 139 LKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDV----VLWNSLIDGYARCGEI 194
Query: 574 ELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWE 608
++ A QL + P +D S+ +L+D G+ E
Sbjct: 195 DI----ALQLFEEMPERDAFSWTVLVDGLSKCGKVE 226
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + ++ VS+L L IH+++ K G D + T L+ +Y KCG
Sbjct: 297 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 356
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E A VF + + V WT++I G + A+ +FL+M + G P + L A
Sbjct: 357 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 416
Query: 185 CSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-NRIREKNVM 242
C+ + G+Q ++ +Y+ E L + G L A N N +
Sbjct: 417 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV 476
Query: 243 SWTTVIGACGENGE 256
W +++G +G+
Sbjct: 477 IWMSLLGGSRNHGK 490
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 210/635 (33%), Positives = 353/635 (55%), Gaps = 20/635 (3%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE-AGNYPTNVTLGTALTACS 186
A VF + ++V++W S++ +V ++ P A+ + +MLE + N P T + L C+
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L ++GK +H VVKY D + +L ++Y+ CG L SA F R+ +N + WT+
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I +N + L + KM +G P+E T+ ++ S C + L VG ++HS ++
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ ++++ +Y KCG + A+++FD +S ++ W+A+I G+ + +
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVK-----------N 259
Query: 367 NGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
N TEAL +F ++ S M+P+ T ++++ C++L LE G +H +T V +
Sbjct: 260 NRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSL 319
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+L++M+ KCG I+ A R+F MS + LISW SM+ G A H L +AL F M +
Sbjct: 320 NNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDL 379
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
+P+++TF+G L ACS+AG+V E F ++ Y ++ +HY C++D+ R G + EA
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAR 439
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+FI+ M +P+ IW + CR + N+ELG AA LL+L+P + Y +L +I+
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRK 499
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
W +V V+ L E+ + +T S + I + +SF D HP+ AEI +L ++ EK K
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK 559
Query: 666 CFGYKQQESFELTD------EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
GY S L + EES S HSEKLA+ +GLL + I I+++K+ +C DCH
Sbjct: 560 LVGYVADTSEVLLNIDDNKKEESVS-QHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCH 618
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK+++ + R+I +RD R H F +G C+CRD+
Sbjct: 619 TLIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDY 653
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 196/336 (58%), Gaps = 12/336 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ SLL+ C +++H +VK H D ++ T L+N+Y CG+++ A+ +F+ +
Sbjct: 81 TFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERM 140
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N V WTS+ISGY++N P A+ ++ M E G P VT+ T ++AC+ L+ + +G
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGM 200
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++H+++ + + +G++L ++Y+ CG L +A + F+++ +K+V +W+ +I +N
Sbjct: 201 KLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNN 260
Query: 256 EAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + L+ F ++ ++PNE T+ ++ S C + L G VH + ++ +
Sbjct: 261 RSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLN 320
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS++ ++ KCG +D A+++FD MS+ +L++WN+M+ G L+ H G EAL+
Sbjct: 321 NSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNG-----------LALHGLGREALA 369
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
F + ++ ++PD TF +LT CS +++G+++
Sbjct: 370 QFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKL 405
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/626 (33%), Positives = 352/626 (56%), Gaps = 20/626 (3%)
Query: 135 LPR-INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
LPR N S + IS + Q EL+ + D + + L C+ ++
Sbjct: 25 LPRRSNTSSLSRNISVFASYEQEELSPGRYSDEFNVVQASDFIEI---LQLCARNGAVME 81
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
K H ++ + + D ++ N L + YS CG + A + F+ + E++++SW T+IG
Sbjct: 82 AKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 141
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
N + L F +M +EG + +EFT++S+ S CG ++H L +K NL V
Sbjct: 142 NRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYV 201
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+++ LY KCG++++A ++F+ M + VTW++M+AG+ Q + EAL
Sbjct: 202 GTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNY-----------EEAL 250
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++ + ++ + +T SS++ CS L AL +G+Q+HA+ K+GF S+V V ++ V+MY
Sbjct: 251 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMY 310
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG + + +F E+ + + W ++I+GFA H+ + + LFE M G+ PN+VTF
Sbjct: 311 AKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFS 370
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L+ C + G+V E +F++M+ Y + P + HY C++D+ R G + EA++ IK + F
Sbjct: 371 SLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPF 430
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EP IW +A CR N+EL AA++L +L+P++ ++ +L +I+ + +WE++A
Sbjct: 431 EPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKS 490
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L R+ + + SWI IKDKV+ F+ + HP+ EI +LD LV + + FGYK
Sbjct: 491 RKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSV 550
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
EL D +E + HSEKLA+ FGL+ P S + ++K+ +C DCH F+K +
Sbjct: 551 EHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMA 610
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T R IIVRD+ R H F +GHC+C +F
Sbjct: 611 TRRFIIVRDANRFHHFSDGHCSCGEF 636
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 193/372 (51%), Gaps = 12/372 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
VQ S ++ +LQ C ++ A+ H ++ D + L+N Y KCG +E A++V
Sbjct: 61 VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + ++VSW ++I Y +N A+ +F +M G + T+ + L+AC +
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDA 180
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
K++H +K + + VG +L LY+ CG +N A++ F +++K+ ++W++++
Sbjct: 181 LECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGY 240
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
++ + L + + ++ N+FTL+S+ C + +L G Q+H++ K G+ SN+
Sbjct: 241 VQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNV 300
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V +S + +Y KCG + E+ +F + N+ WN +I+G A+ H E
Sbjct: 301 FVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAK-----------HARPKE 349
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALV 430
+ +F K+ GM P+ TFSS+L++C +E+G + L T G +VV + +V
Sbjct: 350 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 409
Query: 431 NMYKKCGRIERA 442
++ + G + A
Sbjct: 410 DILGRAGLLSEA 421
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 149/296 (50%), Gaps = 6/296 (2%)
Query: 61 EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + EG K + S+L C + +H +KT + +V T L+
Sbjct: 147 EALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHCLSMKTSLDLNLYVGTALL 206
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG + +A +VF+++ + V+W+S+++GYVQ+ E A+ ++
Sbjct: 207 DLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQF 266
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL + + ACS+L ++ GKQ+HA + K + V +S +Y+ CGSL + F+ +
Sbjct: 267 TLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEV 326
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+EKN+ W T+I ++ + + F KM +G+ PNE T +S+ SVCG + G
Sbjct: 327 QEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 386
Query: 297 QVHSL-GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT-WNAMIA 350
+ L G + N+ + ++ + + GL+ EA +L + + W +++A
Sbjct: 387 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLA 442
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 334/597 (55%), Gaps = 18/597 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD+L G PT + +TAC+ +++ + IH+++ + + D + NSL +Y
Sbjct: 50 LDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCK 109
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CG+++ A F+ I ++V+SWT +I +N + L ML +P+ FT TS
Sbjct: 110 CGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSF 169
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
G +G Q+H+L +K ++ V ++++ +Y +C +D A ++FD + N
Sbjct: 170 LKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNE 229
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+IAG A+ D G L F+++ +G +T+SS+ + +R+
Sbjct: 230 VSWNALIAGFARKGD-----------GETTLMKFAEMQRNGFGATHFTYSSVFSALARIG 278
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
ALEQG +HA +K+G V ++ MY K G + A +VF + R L++W +M+T
Sbjct: 279 ALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLT 338
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
FA + L +A+ FE++ G++ NQ+TF+ L ACS+ G+V E YF+MM K+Y ++
Sbjct: 339 AFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMM-KDYNVE 397
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P +DHY+ +D+ R G ++EA F+ KM EP +W + CR H N ++G YAA+
Sbjct: 398 PEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADH 457
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P+D +L +I+ S G+W+D A V+ + + + + SW+ I++ V+ F
Sbjct: 458 VFELDPEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVA 517
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGL 697
+D HP+S EI+++ +E+ + K GY + L + E+ YHSEK+A+AF L
Sbjct: 518 DDSTHPKSEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFAL 577
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+N P + I ++K+ +C DCH+ + ++ + REI+VRD+ R H F NG C+C D+
Sbjct: 578 INMPAGATIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDY 634
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 198/377 (52%), Gaps = 15/377 (3%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L P+V Y S++ C K+L+ A IH+H+ ++ D F++ L+++Y KCG +
Sbjct: 58 LAPTPRV----YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAV 113
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A+ VFD +P +VVSWT LI+GY QN P A+ + DML A P+ T + L A
Sbjct: 114 SDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAA 173
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ +G+Q+HA VKY ++D VG++L +Y+ C ++ AI+ F+ + KN +SW
Sbjct: 174 GACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWN 233
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I G+ L F++M G FT +S+ S + +L G VH+ IK
Sbjct: 234 ALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKS 293
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
G V N+I+ +Y K G + +A+K+FD + +LVTWN M+ AQ
Sbjct: 294 GQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQ----------- 342
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
+ G EA++ F ++ G++ + TF S+LT CS +++G+Q + ++
Sbjct: 343 YGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDH 402
Query: 426 GTALVNMYKKCGRIERA 442
+ V++ + G ++ A
Sbjct: 403 YVSFVDLLGRAGLLKEA 419
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S+ +L +HAH++K+G FV ++ +Y K G+M +A+KVFD +
Sbjct: 266 TYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRV 325
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ ++V+W ++++ + Q + A+ F ++ + G +T + LTACS ++ GK
Sbjct: 326 DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGK 385
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA-IKAFNRIREKNVMSWTTVIGAC 251
Q + Y E + S L G L A I F E W ++GAC
Sbjct: 386 QYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGAC 442
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 366/664 (55%), Gaps = 18/664 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K+G + V LV +Y K +A++VFD + + VS+ ++I GY++
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E ++ +FL+ L+ P +T+ + L AC L + L K I+ Y++K +++V N
Sbjct: 289 VEESVRMFLENLDQFK-PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ CG + +A FN + K+ +SW ++I ++G+ ++ ++ F M+ Q +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T + SV + L+ G +HS GIK G +L V N+++ +Y KCG V ++ K+F
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M + VTWN +I+ + D A L + +++ S + PD+ TF L
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFAT-----------GLQVTTQMRKSEVVPDMATFLVTL 516
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+C+ L A G++IH L+ G+ S++ +G AL+ MY KCG +E +SRVF MS R ++
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
+WT MI + + +AL+ F DM +G+ P+ V F+ + ACS++G+V E L FE M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ YKI P+++HY C++D+ R I +A +FI+ M +P+ IW+ + CR G+ME
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
+ ++++L P D + + + + +W+ V++++ +++ +++ +SWI +
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGK 756
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY------KQQESFELTDEESASVYHSE 689
V+ F D PQS I+K L+ L GY Q E ++ HSE
Sbjct: 757 NVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSE 816
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LAIAFGLLNT +P+ V+K+ +C DCH K+I+ + REI+VRD+ R H F +G C
Sbjct: 817 RLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTC 876
Query: 750 TCRD 753
+C+D
Sbjct: 877 SCKD 880
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/559 (24%), Positives = 272/559 (48%), Gaps = 22/559 (3%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYV 78
R+P+SSL+ + + + S + + N +L F L P T +
Sbjct: 53 REPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT--FP 110
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C ++++ I+ G D FV LV++Y + G + A++VFD +P
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++VSW SLISGY + E A+ ++ ++ + P + T+ + L A +L ++ G+ +H
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLH 230
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ +K V N L ++Y A + F+ + ++ +S+ T+I +
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ +R F + L + +P+ T++S+ CG + L + +++ +K G+ VRN ++
Sbjct: 291 ESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI 349
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG + A+ +F+ M + V+WN++I+G+ Q DL EA+ +F
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-----------MEAMKLFKM 398
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + D T+ ++++ +RL L+ G+ +H+ +K+G D+ V AL++MY KCG
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ + ++F M T ++W ++I+ LQ+ M + V P+ TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 499 CSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
C A + + LG + +++ Y+ + + + LI+M+ + GC+E + ++M
Sbjct: 519 C--ASLAAKRLGKEIHCCLLRFGYESELQIGN--ALIEMYSKCGCLENSSRVFERMS-RR 573
Query: 556 NEVIWSVFIAGCRRHGNME 574
+ V W+ I +G E
Sbjct: 574 DVVTWTGMIYAYGMYGEGE 592
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 235/500 (47%), Gaps = 19/500 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLI 147
+L+ IHA ++ G F L++ Y + VF + P NV W S+I
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
+ +N A+ + + E+ P T + + AC+ L +G ++ ++ E
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D VGN+L +YS G L A + F+ + ++++SW ++I +G + L + ++
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ I P+ FT++S+ G +L ++ G +H +K G S + V N ++ +YLK
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+A+++FD M + V++N MI G+ ++ + E++ +F + N KPD
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMV-----------EESVRMFLE-NLDQFKPD 306
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L T SS+L C L L + I+ LK GF+ + V L+++Y KCG + A VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M + +SW S+I+G+ +A++LF+ M++ + + +T++ ++ + +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 508 ALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
G + K +D + LIDM+ + G + ++ M + V W+ I+
Sbjct: 427 GKG---LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVIS 482
Query: 566 GCRRHGNMELGFYAAEQLLK 585
C R G+ G Q+ K
Sbjct: 483 ACVRFGDFATGLQVTTQMRK 502
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 218/426 (51%), Gaps = 21/426 (4%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ AL++ S+L +R +IHA V+ + L YS S++ F R+
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 238 E-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
KNV W ++I A +NG + L F+ K+ + P+++T S+ C + +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
V+ + +G+ S+L V N+++ +Y + GL+ A+++FD M +LV+WN++I+G+
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY---- 182
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
S+H EAL I+ +L +S + PD +T SS+L L+ ++QG+ +H LK
Sbjct: 183 -------SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+G S VVV LV MY K R A RVF EM R +S+ +MI G+ + +++++
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 477 FEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
F + L +P+ +T L AC + + Y M++ + ++ + + LID++
Sbjct: 296 FLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVY 352
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK-DCESY 594
+ G + A D M+ + + V W+ I+G + G++ + ++ ++ + D +Y
Sbjct: 353 AKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 595 AMLLDI 600
ML+ +
Sbjct: 412 LMLISV 417
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 46/336 (13%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y+ L+ L + +H++ +K+G D V L+++Y KCG + ++ K+F ++
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ V+W ++IS V+ + V M ++ P T L C+SL + RLGK
Sbjct: 470 GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGK 529
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+IH ++++ E + +GN+L +YS CG L ++ + F R+ ++V++WT +I A G G
Sbjct: 530 EIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYG 589
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
E + L F+ M GI P+ +I C HS
Sbjct: 590 EGEKALETFADMEKSGIVPDSVVFIAIIYACS-----------HS--------------- 623
Query: 316 SIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
GLVDE F+ M +H + + MI +A ++DL LS ++A
Sbjct: 624 ---------GLVDEGLACFEKMKTHYKI---DPMIEHYACVVDL----LSRSQKISKAEE 667
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ + +KPD ++S+L C +E E++
Sbjct: 668 F---IQAMPIKPDASIWASVLRACRTSGDMETAERV 700
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 54 VRSLGFQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR F L V T+ K + ++++ L C + + + IH +++ G +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ L+ +Y KCG +E + +VF+ + R +VV+WT +I Y + E A+ F DM ++
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 170 GNYPTNVTLGTALTACS 186
G P +V + ACS
Sbjct: 605 GIVPDSVVFIAIIYACS 621
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/677 (33%), Positives = 376/677 (55%), Gaps = 53/677 (7%)
Query: 109 FFVMTFLVNVYGKCGN---MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
+ ++T + ++ C N M + VF + R + ++T+ I ++Q ++A+H F
Sbjct: 185 YLILTLPIIIHQGCFNSKSMFLTRHVFPSNSR-TLSTFTTHI--HLQQPLLQMALHGFNM 241
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
E NY L C + + R G+++HA+++K + + L LY+ C S
Sbjct: 242 KFE--NY------NAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 293
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF---SKMLSEGI---------- 272
L A F+ + E+NV+SWT +I A + G A Q L F K+ G+
Sbjct: 294 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSN 353
Query: 273 --------QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+PNEFT ++ + C + L +G Q+HSL IKL Y ++ V +S++ +Y K
Sbjct: 354 PNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKD 413
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
G + EA+ +F+ + ++V+ A+I+G+AQ L D+ EAL +F +L GM
Sbjct: 414 GKIHEARTVFECLPERDVVSCTAIISGYAQ---LGLDE--------EALELFRRLQGEGM 462
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
K + T++ +LT S L AL+ G+Q+H L++ S VV+ +L++MY KCG + + R
Sbjct: 463 KSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRR 522
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNAG 503
+F M RT+ISW +M+ G++ H + L+LF M V+P+ VT + L+ CS+ G
Sbjct: 523 IFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGG 582
Query: 504 MVYEALGYF-EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
+ + L F +M + +++P M+HY C++D+ R G +EEAF+FIKKM FEP IW
Sbjct: 583 LEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGS 642
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
+ CR H N+++G +A +QLL+++P + +Y +L +++ SAGRWEDV+ +++L ++ +
Sbjct: 643 LLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTV 702
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--- 679
++ S I + +++F +D HP+ EI + EL K GY S L D
Sbjct: 703 TKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDE 762
Query: 680 --EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRD 737
+E + HSEKLA++FGL+ +P PI V+K+ +C DCHNF K I+ + RE+ +RD
Sbjct: 763 EQKEKILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRD 822
Query: 738 SKRLHKFVNGHCTCRDF 754
R H+ V G C+C D+
Sbjct: 823 KNRFHRIVGGKCSCEDY 839
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/443 (27%), Positives = 217/443 (48%), Gaps = 54/443 (12%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
Q L + G ++ +Y ++L ECVN+++ + +HAH++KT F+ T L+ +Y
Sbjct: 229 QPLLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLY 288
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF-------------LDM 166
KC ++ +A VFD +P NVVSWT++IS Y Q A+++F +D
Sbjct: 289 TKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDK 348
Query: 167 LEAGN--------YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
L+ N P T T LT+C+S LG+QIH+ ++K ED VG+SL
Sbjct: 349 LKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLD 408
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y+ G ++ A F + E++V+S T +I + G + L F ++ EG++ N T
Sbjct: 409 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 468
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
T + + + +L +G QVH+ ++ S + ++NS++ +Y KCG + ++++FD M
Sbjct: 469 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 528
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN-SSGMKPDLYTFSSILTI 397
+++WNAM+ G+ S H G E L +F+ + + +KPD T ++L+
Sbjct: 529 ERTVISWNAMLVGY-----------SKHGEGREVLKLFTLMREETKVKPDSVTILAVLSG 577
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGT-----------ALVNMYKKCGRIERASRVF 446
CS ++G I +D+ G +V++ + GR+E A
Sbjct: 578 CSHGGLEDKGLNI---------FNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFI 628
Query: 447 VEMSTR-TLISWTSMITGFANHS 468
+M T W S++ HS
Sbjct: 629 KKMPFEPTAAIWGSLLGACRVHS 651
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/660 (32%), Positives = 358/660 (54%), Gaps = 26/660 (3%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+L+++Y KC A KVFD++P NVVSW++L+SG+V N + ++ +F +M G Y
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P T T L AC L ++ G QIH + +K E VGNSL +YS CG +N A K
Sbjct: 476 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 535
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTML 290
F RI +++++SW +I G + L F M I+ P+EFTLTS+ C +
Sbjct: 536 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTG 595
Query: 291 SLRVGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ G Q+H ++ G+ S+ + S++ LY+KCG + A+K FD + +++W+++
Sbjct: 596 MIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSL 655
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+AQ + EA+ +F +L + D + SSI+ + + L QG+
Sbjct: 656 ILGYAQEGEF-----------VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 704
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
Q+ AL +K + V ++V+MY KCG ++ A + F EM + +ISWT +ITG+ H
Sbjct: 705 QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 764
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L +++++F +ML + P++V ++ L+ACS++GM+ E F + + + IKP ++HY
Sbjct: 765 LGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHY 824
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G ++EA I M +PN IW ++ CR HG++ELG + LL++
Sbjct: 825 ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA 884
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
K+ +Y M+ +++ AG W + + L + L + SW+ I+ +V+ F+ + HP
Sbjct: 885 KNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHP 944
Query: 649 QSAEIFKVLDELVEKAK-----CFGYKQQESFELTDE--ESASVYHSEKLAIAFGLLNTP 701
+ I + L E + + +G K E ++ DE E HSEKLAI L
Sbjct: 945 LTPVIQETLKEAERRLREELGYVYGLK-HELHDIDDESKEENLRAHSEKLAIGLALATGG 1003
Query: 702 IVSP---ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFGVSF 758
+ I V K+ +C DCH FIK ++ +T +VRD+ R H F +G C+C D+ F
Sbjct: 1004 LNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYCFFF 1063
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 205/393 (52%), Gaps = 17/393 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ + L+ C +L IH +K G V LV++Y KCG + EA+KVF +
Sbjct: 480 TFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI 539
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG--NYPTNVTLGTALTACSSLESIRL 193
+++SW ++I+G+V A+ F M EA P TL + L ACSS I
Sbjct: 540 VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYA 599
Query: 194 GKQIHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GKQIH ++V+ + ++ SL LY CG L SA KAF++I+EK ++SW+++I
Sbjct: 600 GKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 659
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ GE V+ + F ++ Q + F L+SI V LR G Q+ +L +KL
Sbjct: 660 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 719
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ +YLKCGLVDEA+K F M ++++W +I G+ + H G +
Sbjct: 720 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK-----------HGLGKK 768
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALV 430
++ IF ++ ++PD + ++L+ CS +++GE++ + L+T G V +V
Sbjct: 769 SVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVV 828
Query: 431 NMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
++ + GR++ A + M + + W ++++
Sbjct: 829 DLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 861
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 143/270 (52%), Gaps = 25/270 (9%)
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
NL N ++ +Y KC A K+FD M N+V+W+A+++GH DL
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKG--------- 461
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+LS+FS++ G+ P+ +TFS+ L C L ALE+G QIH LK GF V VG +L
Sbjct: 462 --SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSL 519
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV--RP 487
V+MY KCGRI A +VF + R+LISW +MI GF + +AL F M A + RP
Sbjct: 520 VDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERP 579
Query: 488 NQVTFVGALAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI--- 541
++ T L ACS+ GM+Y + G+ +++ + L+D++V+ G +
Sbjct: 580 DEFTLTSLLKACSSTGMIYAGKQIHGF--LVRSGFHCPSSATITGSLVDLYVKCGYLFSA 637
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+AFD IK E + WS I G + G
Sbjct: 638 RKAFDQIK----EKTMISWSSLILGYAQEG 663
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 10/177 (5%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + + A VK S + V+ +V++Y KCG ++EA+K F + +V+SWT +I+G
Sbjct: 700 LRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITG 759
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV-----VKY 204
Y ++ + ++ +F +ML P V L+ACS I+ G+++ + + +K
Sbjct: 760 YGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKP 819
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIGACGENGEAVQG 260
+ E V L G L A + + K NV W T++ C +G+ G
Sbjct: 820 RVEHYACV----VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELG 872
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/592 (34%), Positives = 335/592 (56%), Gaps = 17/592 (2%)
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
+G YP T + L+A ++ + G+Q+H+ + K+ + + VG +L +Y+ C ++S
Sbjct: 4 SGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHS 63
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCG 287
A++ F+++ E+N++SW ++I N + + F +L E + PNE +++S+ S C
Sbjct: 64 AVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACA 123
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
M L G QVH + +K G V NS+M +Y KC DE KLF + ++VTWN
Sbjct: 124 NMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNV 183
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
++ G Q ++ EA + F + G+ PD +FS++L + L AL QG
Sbjct: 184 LVMGFVQ-----------NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG 232
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
IH +K G++ ++ + +L+ MY KCG + A +VF + +ISWT+MI+ + H
Sbjct: 233 TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLH 292
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
++Q ++LFE ML G+ P+ VTFV L+ACS+ G V E L +F M+K + + P +H
Sbjct: 293 GCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEH 352
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
Y C++D+ R G ++EA FI+ M +P +W + CR++GN+++G AAE+L +++
Sbjct: 353 YACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME 412
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
P + +Y +L ++ +GR E+ V+ L + + SWI +K+ + F +D H
Sbjct: 413 PYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSH 472
Query: 648 PQSAEIFKVLDELVEKAKCFGYKQQESF-----ELTDEESASVYHSEKLAIAFGLLNTPI 702
S EI+K+L++L + K GY + F E +EE YHSEKLA+AFGLL PI
Sbjct: 473 SSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPI 532
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
SPI + K+ C CH +K+ + + REIIVRD R H+F +G C+C D+
Sbjct: 533 DSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDY 584
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 227/450 (50%), Gaps = 29/450 (6%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
GP ++ S+L + + + +H+ I K G + FV T LV++Y KC +M A
Sbjct: 5 GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSS 187
+VFD +P N+VSW S+I G+ N+ + A+ VF D+L E P V++ + L+AC++
Sbjct: 65 VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ + G+Q+H VVK+ T V NSL +Y C + +K F + +++V++W +
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ +N + + +F M EGI P+E + +++ ++ +L G +H IKLGY
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 244
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
N+ + S++ +Y KCG + +A ++F+G+ N+++W AMI+ + H
Sbjct: 245 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAY-----------QLHG 293
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG- 426
+ + +F + S G++P TF +L+ CS +E+G H ++K + D+ G
Sbjct: 294 CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEG-LAHFNSMKK--IHDMNPGP 350
Query: 427 ---TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG---FANHSLSHQALQ-LFE 478
+V++ + G ++ A R M + S W +++ + N + +A + LFE
Sbjct: 351 EHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFE 410
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+ P + + C+ +G + EA
Sbjct: 411 ---MEPYNPGNYVLLANM--CTRSGRLEEA 435
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 175/384 (45%), Gaps = 54/384 (14%)
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M G PN+FT +SI S + + G Q+HSL K G+ +N+ V +++ +Y KC
Sbjct: 1 MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDLSAHNGGTEALSIFSK-LNSSG 383
+ A ++FD M NLV+WN+MI G H + D A+ +F L
Sbjct: 61 MHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYD-------------RAVGVFKDVLREKT 107
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
+ P+ + SS+L+ C+ + L G Q+H + +K G + V +L++MY KC +
Sbjct: 108 VIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGV 167
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
++F + R +++W ++ GF + +A F M G+ P++ +F L + ++
Sbjct: 168 KLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLA 227
Query: 504 MVYEA---------LGYFEMM----------------QKEYKI-KPVMDH----YMCLID 533
+++ LGY + M Y++ + + DH + +I
Sbjct: 228 ALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMIS 287
Query: 534 MFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLK 587
+ GC + + + M EP+ V + ++ C G +E G F + +++ +
Sbjct: 288 AYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMN 347
Query: 588 PKDCESYAMLLDIFVSAGRWEDVA 611
P E YA ++D+ AG W D A
Sbjct: 348 PGP-EHYACMVDLLGRAG-WLDEA 369
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 23/275 (8%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPV----------RSLGFQEALSVL----TEGP 70
+ +L D + G KL Q G+ + V ++ F+EA + EG
Sbjct: 150 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 209
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+S+ ++L + +L IH I+K G ++ ++ L+ +Y KCG++ +A +
Sbjct: 210 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 269
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF+ + NV+SWT++IS Y + I +F ML G P++VT L+ACS
Sbjct: 270 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 329
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNS----LCSLYSTCGSLNSAIKAFNRIREKNVMS-WT 245
+ G A+ + D + G + L G L+ A + + K S W
Sbjct: 330 VEEGL---AHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWG 386
Query: 246 TVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTL 279
++GAC + G G ++ E P + L
Sbjct: 387 ALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVL 421
>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
Length = 920
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/731 (32%), Positives = 385/731 (52%), Gaps = 35/731 (4%)
Query: 42 SKLIQLNGNSE-PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
+ ++ GN E P R+L + + EG +S+V++L C + SL A IHA +
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWL--EGLLPNRASFVAILSSCGDHSSLPLARSIHARV 263
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+ G D V T LV +YG+CG+++E+ VF+ + N VSW ++I+ + Q A
Sbjct: 264 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 323
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ--IHAYVVKYQTEDDTSVGNSLCS 218
++ M + G P +T TAL A S S LG+ +H ++ E D VG +L +
Sbjct: 324 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 383
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y + G+++ A AF+ I KN++SW ++ A G+NG A + + F+ M + + PN+ +
Sbjct: 384 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVS 443
Query: 279 LTSISSVCGTMLSLR-VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
++ C + R + A+V G+ +A + N ++ ++ + G ++EA FD
Sbjct: 444 YLAVLGCCEDVSEARSIHAEVVGNGL---FAQESSIANGVVRMFARSGSLEEAVAAFDAT 500
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
+ V+WN +A + A++DL A++ F + G +PD +T S++ +
Sbjct: 501 VVKDSVSWNTKVAALS-----AREDLHG------AITAFYTMQHEGFRPDKFTLVSVVDV 549
Query: 398 CSRLVALEQGEQIHA-LTLKTGFLSDVVVGTALVNMYKKCGR-IERASRVFVEM--STRT 453
C+ L LE G I L+ DVVV +A++NM KCG ++ R+F M +
Sbjct: 550 CADLGTLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKD 609
Query: 454 LISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L++W +MI +A H +AL+LF M + VRP+ TFV L+ CS+AG+V + + F
Sbjct: 610 LVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCF 669
Query: 513 EMMQKEYKI--KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ ++ I +PV +HY CL+D+ R+G + EA DFI+KM + V+W+ + C +
Sbjct: 670 FLAREVLGIEQQPV-EHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSY 728
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE-TDDWS 629
G++E G AA ++L D Y +L +I+ +AGRWED V+ E ++ + S
Sbjct: 729 GDLEGGERAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKS 788
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV---- 685
I +K++V+ F D HPQS I+ L+ L + GY L D E
Sbjct: 789 SIVVKNRVHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLL 848
Query: 686 -YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
YHSEKLAIAFGL++ P I V+K+ +C+DCH K I +T REI VRD R H F
Sbjct: 849 WYHSEKLAIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHF 908
Query: 745 -VNGHCTCRDF 754
+G C+C D+
Sbjct: 909 GKDGECSCGDY 919
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 236/492 (47%), Gaps = 39/492 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ + LL+ C+ L+ +H IVK G ++ + +LV +Y KC ++++A
Sbjct: 22 IPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAA 81
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LE--AGNYPTNVTLGTALTACSSL 188
F L + +W +LI+ S P ++ M LE A N P +T+ L A +S
Sbjct: 82 FSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIASG 138
Query: 189 E----------SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ SI + +H + E D V +L Y CG + SA++ F+RI+
Sbjct: 139 DPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQV 198
Query: 239 KNVMSWTTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++ W I AC N E + L +M EG+ PN + +I S CG SL +
Sbjct: 199 PDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARS 258
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H+ +LG+ ++ V +++ +Y +CG VDE+ +F+ M+ N V+WNAMIA AQ
Sbjct: 259 IHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQ--- 315
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ--IHALTL 415
H + A +I+ ++ G +P+ TF + L + + GE +H
Sbjct: 316 ------CGHR--SAAFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIA 367
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
G DV+VGTALV MY G I+RA F + + ++SW +M+T + ++ + +A++
Sbjct: 368 CAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAME 427
Query: 476 LFEDMLLAGVRPNQVTFVGALAAC---SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
LF M + PN+V+++ L C S A ++ + + +E I ++
Sbjct: 428 LFAAMKRQSLAPNKVSYLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIAN------GVV 481
Query: 533 DMFVRLGCIEEA 544
MF R G +EEA
Sbjct: 482 RMFARSGSLEEA 493
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/531 (23%), Positives = 239/531 (45%), Gaps = 26/531 (4%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
S++ A I+H I + +D FV T L++ YGKCG +E A +VF + +++ W + I
Sbjct: 150 SIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAAIM 209
Query: 149 GYVQNSQ-PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
N + P+ A+ + M G P + L++C S+ L + IHA V +
Sbjct: 210 ACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFL 269
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D V +L ++Y CGS++ +I F + +N +SW +I A + G + +M
Sbjct: 270 GDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRM 329
Query: 268 LSEGIQPNEFT-LTSISSVC-GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
EG +PN+ T +T++ + C + L A +H G ++ V +++ +Y G
Sbjct: 330 QQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTG 389
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGM 384
+D A+ FD + N+V+WNAM+ + NG EA+ +F+ + +
Sbjct: 390 AIDRARAAFDAIPAKNIVSWNAMLTAYGD------------NGRAREAMELFAAMKRQSL 437
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRIERAS 443
P+ ++ ++L C + + IHA + G F + + +V M+ + G +E A
Sbjct: 438 APNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAV 494
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
F + +SW + + + H A+ F M G RP++ T V + C++ G
Sbjct: 495 AAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLG 554
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG-CIEEAFDFIKKM-DFEPNEVIWS 561
+ + + +++ + +++M + G ++E +M D + V W+
Sbjct: 555 TLELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWN 614
Query: 562 VFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
IA +HG+ F +Q ++P D ++ +L AG ED
Sbjct: 615 TMIAAYAQHGHGRKALKLFRIMQQRSSVRP-DSSTFVSVLSGCSHAGLVED 664
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 207/472 (43%), Gaps = 51/472 (10%)
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+Y TL L C + G+Q+H +VK + +GN L +YS C SL+ A
Sbjct: 20 DYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDAN 79
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM-LSEGIQ--PNEFTLTSISSVCG 287
AF+ +R + + +W T+I A +++M L E + PN+ T+ ++
Sbjct: 80 AAFSALRSRGIATWNTLIAA---QSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIA 136
Query: 288 T----------MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ S+ VH +L V +++ Y KCG V+ A ++F +
Sbjct: 137 SGDPSSSSSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI 196
Query: 338 SHVNLVTWNAMI---AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+L+ WNA I AG+ + D AL + ++ G+ P+ +F +I
Sbjct: 197 QVPDLICWNAAIMACAGNDERPD-------------RALLLVRRMWLEGLLPNRASFVAI 243
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ C +L IHA + GFL DVVV TALV MY +CG ++ + VF M+ R
Sbjct: 244 LSSCGDHSSLPLARSIHARVEELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNH 303
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL-AACSNAGMVYEALGYFE 513
+SW +MI FA A ++ M G RPN++TFV AL AACS++ + LG
Sbjct: 304 VSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRPNKITFVTALKAACSSSS---QDLGESA 360
Query: 514 MMQKEYKIKPVMDHYM---CLIDMFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGC 567
+ + M L+ M+ G I+ AFD I + + + +
Sbjct: 361 ALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNG 420
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
R MEL +AA + L P A+L G EDV+ +++ E
Sbjct: 421 RAREAMEL--FAAMKRQSLAPNKVSYLAVL-------GCCEDVSEARSIHAE 463
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/697 (30%), Positives = 362/697 (51%), Gaps = 32/697 (4%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LL+ SL +H I K G D + L+++Y KCG ++ A +VF +
Sbjct: 9 GLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDR 68
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
NVVSWT+L+ G++++ + + +M A P TL +L AC + G I
Sbjct: 69 NVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGI 128
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGE 256
H V+ ++ V +SL +YS G + A + F+ + +W ++ G
Sbjct: 129 HGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGH 188
Query: 257 AVQGLRFFSKMLS-EGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY--ASNLR 312
L F +M EG QP+EFT S+ C + + R GAQVH+ G+ ASN
Sbjct: 189 GRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAI 248
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ +++ +Y+KC + A ++F+ + N++ W A++ GHAQ + TEA
Sbjct: 249 LAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQV-----------TEA 297
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L +F + SG +PD + SS++ + + +EQG Q+H +K +DV G ++V+M
Sbjct: 298 LELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDM 357
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG + A R+F EM ++SWT+M+ G H L +A+ LFE+M GV P++VT+
Sbjct: 358 YLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTY 417
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+ L+ACS+AG+V E YF ++++ ++P +HY C++D+ R G + EA D I+ M
Sbjct: 418 LALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMP 477
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
EP +W ++ CR H ++ +G A + LL + + +Y L ++ AG W +
Sbjct: 478 MEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHK 537
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG---LHPQSAEIFKVLDELVEKAK-CFG 668
V++ R L + SW+ + +V+ F G HPQ+ +I +VL ++ + + G
Sbjct: 538 VRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLG 597
Query: 669 YKQQES-FEL--TDEESAS---VYHSEKLAIAFGLLNTPIVS-----PILVVKSTTMCRD 717
Y ++ F L DEES + HSE+LA+ LL + PI V K+ +C D
Sbjct: 598 YNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGD 657
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH F K ++++ R ++VRD+ R H+F +G C+C+D+
Sbjct: 658 CHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDY 694
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ +L +R +L G Q+H K GF SD ++G L++MY KCG ++ A VF M
Sbjct: 7 IAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR 66
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEAL 509
R ++SWT+++ GF H + L+L +M A PN+ T +L AC G +
Sbjct: 67 DRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 510 GYFEM-MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
G + ++ Y+ V+ + L+ + + G I +A W+ ++G
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLV--YSKGGRIGDARRVFDGAGLGSGIATWNAMVSG 182
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/549 (36%), Positives = 318/549 (57%), Gaps = 22/549 (4%)
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE-NGEAVQGLRFFSKMLSE 270
V NSL S+Y+ G L+ A++ F+R+ E+NV++WTTV+ A +G + LRF M +
Sbjct: 117 VSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRD 176
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G+ PN +T +S+ CGT L A +H+ +K+G S++ VR+S++ Y+K G +D
Sbjct: 177 GVAPNAYTFSSVLGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGG 233
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+++FD M +LV WN++IAG AQ D G A+ +F ++ +G + T
Sbjct: 234 RRVFDEMVTRDLVVWNSIIAGFAQSGD-----------GVGAIELFMRMKDAGFSANQGT 282
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+S+L C+ +V LE G Q+HA LK + D+++ AL++MY KCG +E A +F M
Sbjct: 283 LTSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMP 340
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R +ISW++MI+G A + S +AL++F+ M GV PN++T VG L ACS+AG+V +
Sbjct: 341 QRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWY 400
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
YF M+K + I+P +H+ C++D+ R G ++EA +FI+ M+ EP+ VIW + CR H
Sbjct: 401 YFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMH 460
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+ L YAA ++LKL+P D + +L + + +W D R+ + + SW
Sbjct: 461 KSGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSW 520
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
I ++ V+ F D HP S I + L+ L+ + GY Q F L D +E
Sbjct: 521 IELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLK 580
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
YHSEK+AIAFG ++ PI ++K+ +C DCH F K+++ R II+RD R H F
Sbjct: 581 YHSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQ 640
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 641 DGACSCGDY 649
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 195/409 (47%), Gaps = 29/409 (7%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQD------FFVMTFLVNVYGKC 122
+ S L++ CV + + +IH H+ G SH FV LV++Y K
Sbjct: 69 RADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNSLVSMYAKF 128
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQ-NSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G +++A ++FD +P NVV+WT++++ + + E A+ + M G P T +
Sbjct: 129 GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVAPNAYTFSSV 188
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC + + +HA VK + D V +SL Y G L+ + F+ + +++
Sbjct: 189 LGACGTPGVL---AALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVFDEMVTRDL 245
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W ++I ++G+ V + F +M G N+ TLTS+ C M+ L G QVH+
Sbjct: 246 VVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMVMLEAGRQVHAH 305
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K Y +L + N+++ +Y KCG +++A+ LF M ++++W+ MI+G AQ
Sbjct: 306 VLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMISGLAQ------- 356
Query: 362 DLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGF 419
NG + EAL +F + S G+ P+ T +L CS +E G ++ G
Sbjct: 357 -----NGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYYFRSMKKLFGI 411
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ +V++ + G+++ A +M+ + W +++ H
Sbjct: 412 QPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMH 460
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 11/297 (3%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL L +G ++ S+L C L+ +HA VK G D FV + L
Sbjct: 164 EEALRFLVAMWRDGVAPNAYTFSSVLGACGTPGVLA---ALHASTVKVGLDSDVFVRSSL 220
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y K G+++ ++VFD + ++V W S+I+G+ Q+ AI +F+ M +AG
Sbjct: 221 IDAYMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQ 280
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
TL + L AC+ + + G+Q+HA+V+KY E D + N+L +Y CGSL A F+R
Sbjct: 281 GTLTSVLRACTGMVMLEAGRQVHAHVLKY--ERDLILHNALLDMYCKCGSLEDAEALFHR 338
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ +++V+SW+T+I +NG++ + LR F M SEG+ PN T+ + C + G
Sbjct: 339 MPQRDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDG 398
Query: 296 -AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
S+ G N ++ L + G +DEA + M+ + V W ++
Sbjct: 399 WYYFRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLG 455
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 338/600 (56%), Gaps = 24/600 (4%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L C + +L E +H+ V+ G D ++ + L+ +Y +CG++ A++VFD + +V
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
V +TSLIS + +N + ELA + ML+ G P T+ T LTAC + LG+QIH Y
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGY 236
Query: 201 VVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++K SV +S L YS G A F+ + KNV+SW +++ +G
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 296
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F M+SEG+ PNEF L+ + CG S+ +G Q+H IK +++RV N+++
Sbjct: 297 EALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALL 353
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFS 377
+Y + GLV+E + + + + + +LV+W I+ + Q NG G +A+++
Sbjct: 354 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQ------------NGFGEKAIALLC 401
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+++S G P+ Y FSS+L+ C+ + +L+QG Q H L LK G S++ G AL+NMY KCG
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 461
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A F M T + SW S+I G A H +++AL++F M G++P+ TF+G L
Sbjct: 462 QMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 521
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
C+++GMV E +F +M +Y P HY C+IDM R G +EA I M FEP+
Sbjct: 522 GCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDA 581
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+IW +A C+ H N+++G AA++L++L +D SY ++ +I+ G WED V+
Sbjct: 582 LIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 641
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
E + + SWI I ++V++F D HP S I+++L ELV + F + E F++
Sbjct: 642 DETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDF--DELEPFDV 699
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 251/494 (50%), Gaps = 38/494 (7%)
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+N K G + +A +FD +PR NVV+WTS++SGY +N +PE A+ +F DM+E+G P +
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
AL AC+ L ++R G+Q+H+ V+ D +G+ L +YS CGSL +A + F+R
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ +V+ +T++I A NGE +ML +G++PNE T+T+I + C +L G
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----G 230
Query: 296 AQVHSLGI-KLGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
Q+H I K+G S ++ +++ Y + G A+ +FD + N+V+W +M+ +
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYI 290
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ L EAL +F + S G+ P+ + S +L C ++ G Q+H
Sbjct: 291 RDGRL-----------EEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCS 336
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K ++D+ V AL++MY + G +E + ++ L+SWT+ I+ + +A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--- 530
+ L M G PN F L++C++ + + + + + +K D +C
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL-----ALKLGCDSEICTGN 451
Query: 531 -LIDMFVR---LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLL 584
LI+M+ + +G AFD + D W+ I G +HG N L ++ +
Sbjct: 452 ALINMYSKCGQMGSARLAFDVMHTHDVTS----WNSLIHGHAQHGDANKALEVFSKMRSN 507
Query: 585 KLKPKDCESYAMLL 598
+KP D +L+
Sbjct: 508 GIKPDDSTFLGVLM 521
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DVV+ +N K GR+ A +F M + +++WTS+++G+ + AL +F DM+
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYM--CLIDMFVRL 538
+GV PN AL AC++ G AL E + + D ++ CLI+M+ R
Sbjct: 107 ESGVAPNDFACNAALVACADLG----ALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
G + A + +MD P+ V ++ I+ R+G EL A Q+LK LKP +
Sbjct: 163 GSLPAAKEVFDRMD-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 215
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 58 GFQE-ALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF E A+++L +EG ++ S+L C + SL H +K G +
Sbjct: 391 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 450
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+N+Y KCG M A+ FD + +V SW SLI G+ Q+ A+ VF M G
Sbjct: 451 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 510
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P + T L C+ + G+ ++ +Y S + + G + A++
Sbjct: 511 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 570
Query: 232 AFNRIR-EKNVMSWTTVIGAC 251
N + E + + W T++ +C
Sbjct: 571 MINDMPFEPDALIWKTLLASC 591
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/731 (31%), Positives = 370/731 (50%), Gaps = 68/731 (9%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S L + S + +H H K GS Q +L+ +Y K N++ A K+FD +
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 139 NVVSWTSLISGYVQNS-QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N +WT LISG+ + + EL +F +M G P TL + L CS +I+ GK I
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA++++ D + NS+ LY C A F + EK+V+SW +IGA G+
Sbjct: 157 HAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDV 216
Query: 258 VQGLRFFSK-------------------------------MLSEGIQPNEFTLTSISSVC 286
+ L F M++ G + + T SI+ +
Sbjct: 217 EKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTF-SIALIL 275
Query: 287 GTMLSL-RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS------- 338
+ LSL VG Q+H + G S+ +R+S++ +Y KCG +D+A + +
Sbjct: 276 VSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKG 335
Query: 339 ---------HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDL 388
+V+W++M++G+ NG E + F + + D+
Sbjct: 336 NFGVTCKEPKARMVSWSSMVSGYVW------------NGKYEDGMKTFRSMVCELIVVDI 383
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T ++I++ C+ LE G+QIHA K G D VG++L++MY K G ++ A +F +
Sbjct: 384 RTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ 443
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+ ++ WTSMI+G A H +A+ LFE ML G+ PN+VTFVG L ACS+ G++ E
Sbjct: 444 IKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEG 503
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
YF MM+ Y I P ++HY +++++ R G + EA +FI + +W F++ CR
Sbjct: 504 CRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCR 563
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
H N +G +E LL+ P D ++Y +L ++ S +W++ A+V++L + + +
Sbjct: 564 LHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQ 623
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASV- 685
SW+++KD+++SF D HPQ EI+ LD L+ + K GY + D EE V
Sbjct: 624 SWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAKLVMQDVEEEQGEVL 683
Query: 686 --YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+HSEKLA+ F ++NT +PI ++K+ +C DCHNF K + L REIIVRD+ R H
Sbjct: 684 ISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLLEREIIVRDTHRFHH 743
Query: 744 FVNGHCTCRDF 754
F C+C ++
Sbjct: 744 FKQSSCSCGEY 754
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 64/463 (13%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G+SE V SL F+E + +G + S+L+ C ++ + IHA I++ G D
Sbjct: 113 GSSELVFSL-FRE---MQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGD 168
Query: 109 FFVMTFLVNVYGKC-------------------------------GNMEEAQKVFDNLPR 137
+ ++++Y KC G++E++ ++F N P
Sbjct: 169 VVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPN 228
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+VVSW ++I G +Q LA+ M+ G + VT AL SSL + +G+Q+
Sbjct: 229 KDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQL 288
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK-----AFNRIREKN-----------V 241
H V+ + D + +SL +Y CG ++ A N +R+ N +
Sbjct: 289 HGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARM 348
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW++++ NG+ G++ F M+ E I + T+ +I S C L G Q+H+
Sbjct: 349 VSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAY 408
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
K+G + V +S++ +Y K G +D+A +F+ + N+V W +MI+G A
Sbjct: 409 IQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCA-------- 460
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
H G EA+S+F + + G+ P+ TF +L CS + +E+G + + T ++
Sbjct: 461 ---LHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHIN 517
Query: 422 -DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
+V T++VN+Y + G + A E S S W S ++
Sbjct: 518 PEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 28/247 (11%)
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
S QP F L S +S+ G+ SLR +H K G L N ++ LY+K +D
Sbjct: 30 SRSRQPCSF-LHSTTSI-GSPPSLRA---LHGHYFKKGSLQILNSANYLLTLYVKSSNLD 84
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPD 387
A KLFD ++H N TW +I+G A+ G +E S+F ++ + G P+
Sbjct: 85 HAHKLFDEITHKNTQTWTILISGFARAA-----------GSSELVFSLFREMQADGACPN 133
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
YT SS+L CSR ++ G+ IHA L+ G DVV+ +++++Y KC E A F
Sbjct: 134 QYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFE 193
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ-----VTFVGALAACSNA 502
M + ++SW MI + ++L++F + PN+ T + L C
Sbjct: 194 LMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNF------PNKDVVSWNTIIDGLIQCGYE 247
Query: 503 GMVYEAL 509
+ E L
Sbjct: 248 RLALEQL 254
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/549 (36%), Positives = 322/549 (58%), Gaps = 27/549 (4%)
Query: 233 FNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FN+ +K NV SW +VI +G++V+ LR FS M ++PN T C +L
Sbjct: 32 FNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLD 91
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G Q H + G+ +L V ++++ +Y KCG + +A+ LFD +SH N+V+W +MI G
Sbjct: 92 LHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITG 151
Query: 352 HAQMMD----------LAKDDL---------SAHNG-GTEALSIFSKLNSSG-MKPDLYT 390
+ Q D +A+ D+ A NG TE++ IF ++ G + + T
Sbjct: 152 YVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVT 211
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
S++L C+ + G+ IH +K G S+V VGT++++MY KCG++E A + F M
Sbjct: 212 LSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR 271
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+ + SW++M+ G+ H + +AL++F +M +AGV+PN +TFV LAACS+AG++ E
Sbjct: 272 EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWH 331
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+F+ M E+ ++P ++HY C++D+ R G ++EAFD IK M P+ V+W + CR H
Sbjct: 332 WFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 391
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
N++LG +A +L +L PK+C Y +L +I+ AGRWEDV ++ L + L + +S
Sbjct: 392 KNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSL 451
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESASVY- 686
+ IK +V+ F D HPQ +I++ L++L K + GY + L D EE V
Sbjct: 452 VDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMVLR 511
Query: 687 -HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLA+AFG++NT + I ++K+ +C DCH IK I+ + REI+VRDSKR H F
Sbjct: 512 VHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFR 571
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 572 DGLCSCGDY 580
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 180/393 (45%), Gaps = 47/393 (11%)
Query: 111 VMTFLVNVYGK-CGNMEEAQKVFDN-LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V+TF +Y + N +F+ + + NV SW S+I+ ++ A+ F M +
Sbjct: 10 VITFSWKIYRRRYSNNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK 69
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P T A+ +CS+L + G+Q H + + E D V ++L +YS CG L
Sbjct: 70 LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 129
Query: 229 AIKAFNRIREKNVMSWT-------------------------------TVIGACGENGEA 257
A F+ I +N++SWT ++I +NG +
Sbjct: 130 ARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMS 189
Query: 258 VQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ + F +M+ +G I N TL+++ C S R+G +H IK+G SN+ V S
Sbjct: 190 TESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTS 249
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
I+ +Y KCG V+ A+K FD M N+ +W+AM+AG+ H EAL +F
Sbjct: 250 IIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGM-----------HGHAKEALEVF 298
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKK 435
++N +G+KP+ TF S+L CS LE+G A++ + V +V++ +
Sbjct: 299 YEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGR 358
Query: 436 CGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
G ++ A + M R + W +++ H
Sbjct: 359 AGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 391
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 161/360 (44%), Gaps = 47/360 (13%)
Query: 30 DKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKS 89
DK + S+ ++L + + E +R+ LS+ K S++ ++ C
Sbjct: 37 DKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSL-----KPNRSTFPCAIKSCSALLD 91
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + H + G D FV + LV++Y KCG + +A+ +FD + N+VSWTS+I+G
Sbjct: 92 LHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITG 151
Query: 150 YVQNSQPELAIHVFLDMLEA---------GNYPTN-----------------------VT 177
YVQN A+ VF M E Y N VT
Sbjct: 152 YVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVT 211
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L L AC+ S RLGK IH V+K E + VG S+ +Y CG + A KAF+R+R
Sbjct: 212 LSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMR 271
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-- 295
EKNV SW+ ++ G +G A + L F +M G++PN T S+ + C L G
Sbjct: 272 EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWH 331
Query: 296 ---AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
A H ++ G + ++ L + G + EA L GM + V W A++
Sbjct: 332 WFKAMSHEFDVEPG----VEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387
>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/693 (32%), Positives = 372/693 (53%), Gaps = 23/693 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++ +++ ++L C + +L IH+ ++K G + + L+ +Y G E+A+
Sbjct: 229 EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAEL 288
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF + +++SW S+++ Y Q+ A+ + M VT +AL ACS E
Sbjct: 289 VFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEF 348
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
GK +HA V+ ++ VGN+L +LY+ G + A K F + +++ ++W +IG
Sbjct: 349 ATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGG 408
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS----LRVGAQVHSLGIKLG 306
++ E + L+ F M EG+ N T IS+V G L+ L G +H+ I G
Sbjct: 409 HADSEEPDEALKAFKLMREEGVPINYIT---ISNVLGACLAPNDLLEHGMPIHAFIILTG 465
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ S+ V+NS++ +Y KCG ++ + +FD ++ N A + + H
Sbjct: 466 FQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKN-----------ASAWNAMMAANAHH 514
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EAL ++ +G+ D ++FS L ++L LE+G+Q+H L +K G S+ V
Sbjct: 515 GHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVA 574
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+A ++MY KCG I+ R+ R+ +SW + + F+ H +A + F +M+ GV+
Sbjct: 575 SATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVK 634
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ VTFV L+ACS+ GMV E L Y++ M KE+ I + H +C+ID+ R G EA
Sbjct: 635 PDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAET 694
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FIK+M P + +W +A C+ HGN+ELG A E LLKL P D +Y + +I + G+
Sbjct: 695 FIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGK 754
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
WEDV ++ K+ + SW+++K+K+ F D HPQ++EI+ L+EL + K
Sbjct: 755 WEDVEKIRRQMGLNKIKKKPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKE 814
Query: 667 FGYKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY S+ L TDEE HSE+LA+A+GL+++P S + + K+ +C DCH+
Sbjct: 815 AGYIPDISYALQDTDEEQKEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSV 874
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K + + R+I++RD R H+F G C+C D+
Sbjct: 875 YKFASGILGRKIVLRDPYRFHQFSGGQCSCTDY 907
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/451 (31%), Positives = 236/451 (52%), Gaps = 16/451 (3%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQD 108
VR+ ++E++ E G K + SL+ C + L +H IVK G D
Sbjct: 5 VRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSD 64
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV T LV++YG G +A KVF + NVVSWT+L+ YV +P + ++++ M
Sbjct: 65 VFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRS 124
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G + T+ + ++ C SLE+ LG Q+ +V+KY E + SV NSL S++ GS+
Sbjct: 125 EGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEE 184
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F+ + E + +SW ++I A NG + LR FS M + N TL+++ + CG+
Sbjct: 185 ACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGS 244
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +L+ G +HSL +K G+ SN+ N+++ +Y G ++A+ +F GM ++++WN+M
Sbjct: 245 VDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSM 304
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+A +AQ +AL + + + + TF+S L CS +G+
Sbjct: 305 MACYAQ-----------DGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGK 353
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+HAL + G +V+VG ALV +Y K G + A +VF M R ++W ++I G A+
Sbjct: 354 ILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSE 413
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+AL+ F+ M GV N +T L AC
Sbjct: 414 EPDEALKAFKLMREEGVPINYITISNVLGAC 444
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 209/427 (48%), Gaps = 26/427 (6%)
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL-GKQIHAYVVKYQ 205
+SG+V+ ++ F +M + G P+ + + + +TAC E + + G Q+H ++VK
Sbjct: 1 MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
D VG SL LY G A+K F + KNV+SWT ++ A + GE + +
Sbjct: 61 LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M SEG+ N+ T++S+ S C ++ + +G QV IK G +N+ V NS++ ++ G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGM 384
V+EA +F GM + ++WN+MIA + + NG E+L FS +
Sbjct: 181 SVEEACYVFSGMDEHDTISWNSMIAAYIR------------NGLCKESLRCFSWMFRVHK 228
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
+ + T S++L C + L+ G IH+L LK G+ S+V L+ MY GR E A
Sbjct: 229 EINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAEL 288
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA-- 502
VF M + +ISW SM+ +A AL+L M N VTF ALAACS+
Sbjct: 289 VFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEF 348
Query: 503 ---GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
G + AL + + + L+ ++ + G + EA + M + + V
Sbjct: 349 ATEGKILHALVIHVGLHENVIVGNA------LVTLYAKSGLMIEAKKVFQTMP-KRDGVT 401
Query: 560 WSVFIAG 566
W+ I G
Sbjct: 402 WNALIGG 408
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 13/238 (5%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL L E G V S+ L L + +H VK G + FV +
Sbjct: 518 EEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASAT 577
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++YGKCG +++ ++ + +SW L S + ++ E A F +M+ G P +
Sbjct: 578 MDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDH 637
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT + L+ACS + G + ++K + +G+ +C + G +A
Sbjct: 638 VTFVSLLSACSHGGMVEEGLAYYDSMIK-EFGIPAKIGHCVC-IIDLLGRSGRFAEAETF 695
Query: 236 IREKNVMS----WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI-SSVCGT 288
I+E V W +++ AC +G G + +L + P++ + + S++C T
Sbjct: 696 IKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLK--LDPSDDSAYVLYSNICAT 751
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/666 (32%), Positives = 357/666 (53%), Gaps = 19/666 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF--VMTFLVNVYGKCGNMEEAQKVFD 133
++ +LL C + + +HA VK G + F V L+ Y + ++ A +F+
Sbjct: 143 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFE 202
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + V++ +LI+GY ++ AIH+FL M ++G+ P++ T L A L L
Sbjct: 203 EILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFAL 262
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+Q+H V D SVGN + YS + FN + E + +S+ VI + +
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQ 322
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ + L F +M G F ++ S+ + SL+VG QVH I S L V
Sbjct: 323 AEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHV 382
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC + DEA+ +F +S + V+W A+I+G+ Q H G L
Sbjct: 383 GNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQK--------GLHGAG---L 431
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F+K+ + ++ D TF+++L + +L G+Q+HA +++G L +V G+ LV+MY
Sbjct: 432 KLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 491
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A +VF EM R +SW ++I+ +A++ A+ F M+ +G++P+ V+ +
Sbjct: 492 AKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSIL 551
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+ G V + +F+ M Y I P HY C++D+ R G EA + +M F
Sbjct: 552 GVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 611
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL-KPKDCESYAMLLDIFVSAGRWEDVAV 612
EP+E++WS + CR + N L AAEQL + K +D +Y + +I+ +AG+WE+V
Sbjct: 612 EPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRH 671
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
VK RE + + +SW+ + K++ F ND HP EI K ++EL + + GYK
Sbjct: 672 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIEREGYKPD 731
Query: 673 ESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
S + D +E + YHSE+LA+AF L++TP PI+V+K+ CRDCH IK+I+
Sbjct: 732 TSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISK 791
Query: 728 LTAREI 733
+ R I
Sbjct: 792 IVKRVI 797
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 275/584 (47%), Gaps = 47/584 (8%)
Query: 22 SSSLATLKD-KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSL 80
S +LATL+ + + +R +++I+ N++ RS E L L G Q S+ + +
Sbjct: 12 SRTLATLRQLRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDL--LRRG---QVSAALKV 66
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
E ++ ++S +I ++ K G++ A+ +FD +P V
Sbjct: 67 YDEMPHKNTVSTNTMISGYV--------------------KMGDLSSARHLFDAMPDRTV 106
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
V+WT L+ Y N+ + A +F M + P VT T L C+ Q+HA+
Sbjct: 107 VTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAF 166
Query: 201 VVK--YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
VK + T +V N L Y L+ A F I +K+ +++ T+I ++G
Sbjct: 167 AVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYT 226
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F KM G +P++FT + + + +G Q+H L + G++ + V N I+
Sbjct: 227 EAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQIL 286
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+ Y K V E + LF+ M ++ V++N +I+ ++Q E+L++F +
Sbjct: 287 HFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQY-----------EESLNLFRE 335
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G + F+++L+I + L +L+ G Q+H + S + VG +LV+MY KC
Sbjct: 336 MQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEM 395
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A +F +S R+ +SWT++I+G+ L L+LF M A +R +Q TF L A
Sbjct: 396 FDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKA 455
Query: 499 CSNAGMVYEALG--YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+AG LG + + ++ V L+DM+ + G I++A ++M + N
Sbjct: 456 --SAGFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP-DRN 511
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLL 598
V W+ I+ +G+ E A ++++ L+P +L+
Sbjct: 512 AVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLI 555
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 205/421 (48%), Gaps = 17/421 (4%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + G K ++ +L+ V + + +H V TG +D V +++ Y K
Sbjct: 233 LKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKH 292
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
+ E + +F+ +P ++ VS+ +IS Y Q Q E ++++F +M G N T L
Sbjct: 293 DRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATML 352
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+ ++L S+++G+Q+H + + VGNSL +Y+ C + A F + +++ +
Sbjct: 353 SIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTV 412
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT +I + G GL+ F+KM ++ ++ T ++ SL +G Q+H+
Sbjct: 413 SWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFI 472
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ G N+ + ++ +Y KCG + +A ++F+ M N V+WNA+I+ +A D
Sbjct: 473 IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGD----- 527
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLS 421
G A+ F+K+ SG++PD + +L CS +EQG E A++ G
Sbjct: 528 ------GEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITP 581
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITG---FANHSLSHQAL-QL 476
++++ + GR A ++ EM I W+S++ + N SL+ +A QL
Sbjct: 582 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQL 641
Query: 477 F 477
F
Sbjct: 642 F 642
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/641 (33%), Positives = 343/641 (53%), Gaps = 61/641 (9%)
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CGN+ A ++FD +P NV+SWT++++GY++ + ELA +FLDM
Sbjct: 87 CGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDM--------------- 131
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
H D + N++ Y G + ++ F + ++V
Sbjct: 132 ----------------HV--------KDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDV 167
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT++IG NG++ + L F KML G++P T + S C + +G QVH
Sbjct: 168 ISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGH 227
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+KLG + + S++ Y C ++ A K+F+ N+V W A++ +
Sbjct: 228 VVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVW------- 280
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+N +AL +F + G P+ TFS L C L AL++G++IH + +K G +
Sbjct: 281 ----NNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLET 336
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DV VG +LV MY +CG + A VF ++ + ++SW S+I G A H AL F M+
Sbjct: 337 DVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMI 396
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK---IKPVMDHYMCLIDMFVRL 538
GV PN++TF G L+ACS +GM+ + +FE + + YK ++P HY C++D+ R
Sbjct: 397 RRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR-YKSNVLRP--QHYACMVDILGRC 453
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G ++EA + ++ M + N +IW ++ CR H N+E+ AA+ +L L+P +Y +L
Sbjct: 454 GKLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLS 513
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+I+ SAGRW DV+ ++ ++ L + SW+ ++ K + F D HP S I++ LD
Sbjct: 514 NIYASAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLD 573
Query: 659 ELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
L +K K FGY + F L D +E +HSE+LAIAFGL++T S I V+K+
Sbjct: 574 WLGKKLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLR 633
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ IK+++ + R+I+VRDS R H F NG C+C D+
Sbjct: 634 VCGDCHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDY 674
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/413 (27%), Positives = 204/413 (49%), Gaps = 25/413 (6%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVN--RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
A + E P+ S+ +++ + R L+ + H+ +D +V+ Y
Sbjct: 93 ATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHV------KDVAAWNAMVHGY 146
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
+ G +EE ++F+ +P +V+SWTS+I G N + E A+ VF ML +G PT T
Sbjct: 147 FENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFA 206
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
L+AC++ LG Q+H +VVK + SL + Y+ C + A K FN K
Sbjct: 207 CVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTK 266
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+ WT ++ A N + LR F M G PN+ T + C + +L G ++H
Sbjct: 267 NVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIH 326
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
++ IKLG +++ V NS++ +Y +CG V+ A +F ++ ++V+WN++I G AQ
Sbjct: 327 TMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQ----- 381
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
H G AL F+++ G+ P+ TF+ +L+ CSR L +G + +
Sbjct: 382 ------HGFGLWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISR--Y 433
Query: 420 LSDVVVG---TALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS 468
S+V+ +V++ +CG+++ A + M + + W ++++ HS
Sbjct: 434 KSNVLRPQHYACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVHS 486
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 165/318 (51%), Gaps = 24/318 (7%)
Query: 45 IQLNGNSEPVRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
+ LNG SE EAL V L G + S++ +L C N + +H H+
Sbjct: 177 LDLNGKSE--------EALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHV 228
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
VK G F+ L+ Y C +E A K+F+ NVV WT+L++ YV N++ + A+
Sbjct: 229 VKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTAYVWNNKHQDAL 288
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
VF DM + G P T L AC LE++ GK+IH +K E D VGNSL +Y
Sbjct: 289 RVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMY 348
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
+ CG++NSA+ F I EK+++SW ++I ++G + L FF++M+ G+ PNE T T
Sbjct: 349 TECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFT 408
Query: 281 SISSVC---GTMLSLRVGAQVHSLGIKLGYASN-LRVRN--SIMYLYLKCGLVDEAQKLF 334
+ S C G +L R + S Y SN LR ++ ++ + +CG +DEA++L
Sbjct: 409 GLLSACSRSGMLLKGRCFFEYIS-----RYKSNVLRPQHYACMVDILGRCGKLDEAEELV 463
Query: 335 DGMS-HVNLVTWNAMIAG 351
M N + W A+++
Sbjct: 464 RYMPVKANSMIWLALLSA 481
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/665 (33%), Positives = 357/665 (53%), Gaps = 49/665 (7%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF+ + N++ W ++ G+ + P A+ +++ M+ G P + T L +C+
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY--------------------------- 220
L++ + G QIH +V+K E D V SL S+Y
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 221 ----STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++ G + SA F+ I K+V+SW +I E G + L F +M+ ++P+E
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ ++ S S+ +G QVHS G+ SNL++ N+++ Y KCG ++ A LF G
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLG 255
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+S+ ++++WN +I G+ + N EAL +F ++ SG P+ T SIL
Sbjct: 256 LSYKDVISWNILIGGYTHL-----------NLYKEALLLFQEMLRSGESPNDVTMLSILH 304
Query: 397 ICSRLVALEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C+ L A++ G IH K G + + T+L++MY KCG IE A +VF M ++L
Sbjct: 305 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSL 364
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+W +MI GFA H ++ A +F M ++P+ +TFVG L+ACS+AGM+ F
Sbjct: 365 PAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRS 424
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M YKI P ++HY C+ID+ G +EA + I M EP+ VIW + C+ HGN+E
Sbjct: 425 MTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVE 484
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG A+ L K++P + SY +L +I+ +AGRW +VA ++ L ++ + + S I I
Sbjct: 485 LGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEID 544
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDE---LVEKAKCFGYKQQESFELTDE--ESASVYHSE 689
V+ F D HP++ EI+ +L+E L+++A + E+ +E E A +HSE
Sbjct: 545 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSE 604
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFGL++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C
Sbjct: 605 KLAIAFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 664
Query: 750 TCRDF 754
+C D+
Sbjct: 665 SCNDY 669
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 204/407 (50%), Gaps = 28/407 (6%)
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
C L L AI F I+E N++ W T+ + + V L+ + M+S G+ PN
Sbjct: 3 FCILSPHFEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPN 62
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+T + C + + + G Q+H +KLGY +L V S++ +Y++ +++A K+FD
Sbjct: 63 SYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFD 122
Query: 336 GMSHVNLVTWNAMIAGHA---------QMMD-LAKDDLSAHNGG----------TEALSI 375
SH ++V++ A++ G+A M D + D+ + N EAL +
Sbjct: 123 RSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALEL 182
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ + ++PD T ++++ +R ++E G Q+H+ GF S++ + AL++ Y K
Sbjct: 183 FKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSK 242
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG +E A +F+ +S + +ISW +I G+ + +L +AL LF++ML +G PN VT +
Sbjct: 243 CGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSI 302
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDH---YMCLIDMFVRLGCIEEAFDFIKKMD 552
L AC++ G + +G + + + ++K V + LIDM+ + G IE A M
Sbjct: 303 LHACAHLGAI--DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSM- 359
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAML 597
+ W+ I G HG F ++ K +KP D +L
Sbjct: 360 LHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLL 406
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/665 (33%), Positives = 358/665 (53%), Gaps = 49/665 (7%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +F+ + N++ W ++ G+ NS A+ +++ M+ G P + + L +C+
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR------------ 235
+++ G+QIH +V+K + D V SL S+Y+ G L A K F+R
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 236 -------------------IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
I K+V+SW +I E + L + M+ ++P+E
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ ++ S C S+ +G Q+HS G+ SN+++ N ++ LY KCG V+ A LF G
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
++ ++++WN +I GH M N EAL +F ++ SG P+ T S+L
Sbjct: 258 LAKKDVISWNTLIGGHTHM-----------NLYKEALLLFQEMLRSGESPNDVTMLSVLP 306
Query: 397 ICSRLVALEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C+ L A++ G IH K G + + T+L++MY KCG IE A +VF M TR+L
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSL 366
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
SW +MI GFA H ++ A LF M G+ P+ +TFVG L+ACS++GM+ F
Sbjct: 367 SSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRS 426
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M ++YKI P ++HY C+ID+ G +EA + I+ M EP+ VIW + C+ H N+E
Sbjct: 427 MSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVE 486
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG A+ L+K++P++ SY +L +I+ +AGRW+ VA ++ L ++ + + S I I
Sbjct: 487 LGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEID 546
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
V+ F D HP++ EI+++L+E+ + G+ S L + +E A +HSE
Sbjct: 547 SVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSE 606
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFGL++T + + +VK+ +CR+CH K+I+ + REII RD RLH +G
Sbjct: 607 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVW 666
Query: 750 TCRDF 754
+C D+
Sbjct: 667 SCHDY 671
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/454 (26%), Positives = 218/454 (48%), Gaps = 48/454 (10%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
NS+ V +L + +++ G + S+ LL+ C K+L + IH H++K G D
Sbjct: 43 NSDSVTALKLY--VCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDM 100
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFD------------------------NLPRI------- 138
+V T L+++Y + G +E+A KVFD N ++
Sbjct: 101 YVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVK 160
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSW ++ISGYV+ + A+ ++ DM++ P T+ T ++AC+ SI LG+Q+H
Sbjct: 161 DVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLH 220
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N L LYS CG + +A F + +K+V+SW T+IG
Sbjct: 221 SWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYK 280
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH-SLGIKLGYASNL-RVRNS 316
+ L F +ML G PN+ T+ S+ C + ++ +G +H + +L +N + S
Sbjct: 281 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS 340
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG ++ A+++FD M +L +WNAMI G A H A +F
Sbjct: 341 LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM-----------HGKANAAFDLF 389
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKK 435
SK+ +G+ PD TF +L+ CS L+ G I +++ + ++++
Sbjct: 390 SKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGH 449
Query: 436 CGRIERASRVFVEMSTRTL-ISWTSMITGFANHS 468
CG + A + M + W S++ H+
Sbjct: 450 CGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHN 483
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/444 (26%), Positives = 220/444 (49%), Gaps = 63/444 (14%)
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L+ AI F I+E N++ W T+ N ++V L+ + M+S G+ PN ++ +
Sbjct: 15 LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C +L G Q+H +KLGY ++ V S++ +Y + G +++A K+FD SH ++V++
Sbjct: 75 CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134
Query: 346 NAMIAGHA---------QMMD-LAKDDLSAHNGG----------TEALSIFSKLNSSGMK 385
A+I G+A ++ D ++ D+ + N EAL ++ + + +K
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
PD T ++++ C++ ++E G Q+H+ GF S++ + L+++Y KCG +E A +
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F ++ + +ISW ++I G + +L +AL LF++ML +G PN VT + L AC++ G +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314
Query: 506 YEALGYFEMMQKEYKIKPVMDH---YMCLIDMFVRLGCIE-------------------- 542
+G + + ++K V + LIDM+ + G IE
Sbjct: 315 --DIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 372
Query: 543 -----------EAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLK 585
AFD KM +P+++ + ++ C G ++LG F + Q K
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYK 432
Query: 586 LKPKDCESYAMLLDIFVSAGRWED 609
+ PK E Y ++D+ G +++
Sbjct: 433 ITPK-LEHYGCMIDLLGHCGLFKE 455
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/702 (30%), Positives = 375/702 (53%), Gaps = 30/702 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVYGKCGNME 126
EG K ++VS+L C + ++++ + IH IV G D ++ +VN+YGKCG ++
Sbjct: 137 EGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVD 196
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++VF+ + N V+W ++I+ ++ + + A + +M G P +TL + + AC+
Sbjct: 197 LAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACA 256
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++SI G+ +H V E D +V N+L +LY CG L +A A I ++ +SWTT
Sbjct: 257 WMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTT 316
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ A +G + + +M EG++ + FT ++ C + +L +G ++H + G
Sbjct: 317 LLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESG 376
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT-WNAMIAGHAQMMDLAKDDLSA 365
+ ++ +++ +Y KCG D A++ FD MS V VT WNA++A +
Sbjct: 377 IELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYV-----------L 425
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
+ G E L IF++++ G+ PD TF SIL C+ L AL G H+ L+ G V
Sbjct: 426 RDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAV 485
Query: 426 G------TALVNMYKKCGRIERASRVFVE---MSTRTLISWTSMITGFANHSLSHQALQL 476
T+++NMY KCG + A F + +++W++M+ ++ LS +AL+
Sbjct: 486 ASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRC 545
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F M GV+P+ V+FV A+A CS++G+V EA+ +F ++ ++ I P H+ CL+D+
Sbjct: 546 FYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLS 605
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G I EA +++ + W ++ CR +G++E A +L L+ +Y++
Sbjct: 606 RAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASLRSG--SAYSL 663
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS-FKPNDGLHPQSAEIFK 655
L +F + +W+DV + E SWI I ++VY F +D L P+ EIF
Sbjct: 664 LASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFA 723
Query: 656 VLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVK 710
L+ L + + GY++ ++ D YHSEK+A+ FGL++TP +P+ +VK
Sbjct: 724 ELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVK 783
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
+ +C+DCH IK I+ + R I +RD + H+F +G C+C+
Sbjct: 784 NIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSCK 825
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 158/550 (28%), Positives = 273/550 (49%), Gaps = 34/550 (6%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVK-TGSHQD 108
N R+L A+++ EG S +++L + LS E H + + +G D
Sbjct: 19 NGHHARALEIFRAMAL--EGVAPDRVSCIAILDAFASLGDLSQGEFFHRTVCEASGLGSD 76
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V T ++ +Y +CG++ A++ FD + NVVSW+++I+ Y Q P A+ +F+ M
Sbjct: 77 VVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDH 136
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLN 227
G +T + L AC+S+ +I LGK IH +V DD +GN++ ++Y CG ++
Sbjct: 137 EGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVD 196
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A + F R+ KN ++W T+I AC + + +M +G++PN+ TL S+ C
Sbjct: 197 LAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACA 256
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
M S+ G VH + G S+ V N+++ LY KCG + A+ +G+ + ++W
Sbjct: 257 WMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTT 316
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
++A +A+ H G A+++ +++ G+K D +TF ++L C + AL G
Sbjct: 317 LLAAYAR-----------HGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALG 365
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFAN 466
E+IH ++G D V+ TALV+MY KCG + A R F MS R + W +++ +
Sbjct: 366 EEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVL 425
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
+ L +F M L GV P+ VTF+ L AC++ ALG + + + D
Sbjct: 426 RDQGKETLGIFARMSLQGVAPDAVTFLSILDACAS----LAALGLGRLTHSRMLERGLFD 481
Query: 527 HYMC---------LIDMFVRLGCIEEA-FDFIKKMDFEPNEVI-WSVFIAGCRRHGNMEL 575
+I+M+ + G + +A +F K ++V+ WS +A + G E
Sbjct: 482 RQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEE 541
Query: 576 G---FYAAEQ 582
FY+ +Q
Sbjct: 542 ALRCFYSMQQ 551
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 168/337 (49%), Gaps = 15/337 (4%)
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++ SW I NG + L F M EG+ P+ + +I ++ L G
Sbjct: 3 DRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEF 62
Query: 298 VHSLGIKL-GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
H + G S++ V +++ +Y +CG V A++ FD M N+V+W+AMIA +AQ
Sbjct: 63 FHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQ-- 120
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G +AL +F +++ G+K + TF S+L C+ + A+ G+ IH +
Sbjct: 121 -------RGHPG--DALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVA 171
Query: 417 TGFL-SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
G L DV++G +VNMY KCG ++ A VF M + ++W +MI + H +A
Sbjct: 172 DGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFA 231
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
L +M L G+RPN++T V + AC+ + E++ E ++ L++++
Sbjct: 232 LLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGE-GLESDNTVANALVNLY 290
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ G + A ++ ++ +++ W+ +A RHG+
Sbjct: 291 GKCGKLRAARHALEGIETR-DKISWTTLLAAYARHGH 326
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 121/250 (48%), Gaps = 29/250 (11%)
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M+ + +WN IA +A+ + H+ AL IF + G+ PD + +IL
Sbjct: 1 MADRSPFSWNLAIAEYAR---------NGHH--ARALEIFRAMALEGVAPDRVSCIAILD 49
Query: 397 ICSRLVALEQGEQIHALTLK-TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ L L QGE H + +G SDVVV TA++ MY +CG + A R F M R ++
Sbjct: 50 AFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVV 109
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW++MI +A AL+LF M GV+ N +TFV L AC A M ALG
Sbjct: 110 SWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDAC--ASMRAIALG----- 162
Query: 516 QKEYKIKPVMDHYM--------CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
K + V D + +++M+ + G ++ A + ++M+ + N V W+ IA C
Sbjct: 163 -KSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAK-NAVTWNTMIAAC 220
Query: 568 RRHGNMELGF 577
RH + F
Sbjct: 221 SRHDRYKEAF 230
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/642 (34%), Positives = 339/642 (52%), Gaps = 17/642 (2%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K AQ + P VV+WT+LISG VQN A+ F M P + T
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
A A ++L GKQIHA +K +D VG S +YS G A + F+ +
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+NV W I +G + + F + G +P+ T + + C L +G Q
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H L I+ G+ ++ V N I+ +Y KC V+ A+ +F+GM N V+W M+A Q
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQ--- 237
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
++ +A +F G++ Y SS+++ + + LE G +HAL +K
Sbjct: 238 --------NDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKA 289
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
D+ VG+ALV+MY KCG IE +VF EM R L+SW +MI+G+A+ A+ LF
Sbjct: 290 CVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLF 349
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
E+M V N VT + L+ACS G V FE M+ Y+I+P +HY C+ DM R
Sbjct: 350 EEMQSEAV-ANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGR 408
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G +E A++F++KM P +W + CR +G ELG AA+ L KL PKD ++ +L
Sbjct: 409 AGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLL 468
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
++F +AGRW++ +V+ ++ + + SW+ K+KV+ F+ D H +++EI +L
Sbjct: 469 SNMFAAAGRWDEATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAML 528
Query: 658 DELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKST 712
+L + + GY ++ L D EE + YHSEK+A+AFGL+ P PI + K+
Sbjct: 529 VKLRTEMQAAGYMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNL 588
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ K I+ + REIIVRD+ R H+F + C+CRDF
Sbjct: 589 RICGDCHSAFKFISGIVGREIIVRDNNRFHRFRDSQCSCRDF 630
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 186/369 (50%), Gaps = 14/369 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA +K G D FV ++Y K G EAQ++FD +P NV W + IS V + +
Sbjct: 80 IHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLDGR 139
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P AI F++ G P +T L AC+ + LG+Q+H V++ E D SV N
Sbjct: 140 PGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANG 199
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +Y C + A FN + +N +SW T++ AC +N E + F EGI+
Sbjct: 200 IIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELT 259
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
++ ++S+ S + L G VH+L +K ++ V ++++ +Y KCG +++ +++F
Sbjct: 260 DYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFH 319
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M NLV+WNAMI+G+A D+ D+ A+++F ++ S + + T +L
Sbjct: 320 EMPERNLVSWNAMISGYAHQGDV---DM--------AMTLFEEMQSEAVA-NYVTLICVL 367
Query: 396 TICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ CSR A++ G +I ++ + + +M + G +ERA +M R
Sbjct: 368 SACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFVQKMPIRPT 427
Query: 455 IS-WTSMIT 462
IS W +++
Sbjct: 428 ISVWGALLN 436
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 143/295 (48%), Gaps = 8/295 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ + L C + + L +H ++++G D V +++VYGKC +E A+ VF+ +
Sbjct: 161 TFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGM 220
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
R N VSW ++++ QN + E A VFL + G T+ + + ++A + + + G+
Sbjct: 221 GRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGR 280
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA VK E D VG++L +Y CGS+ + F+ + E+N++SW +I G
Sbjct: 281 SVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQG 340
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYASNLRVR 314
+ + F +M SE + N TL + S C ++++G ++ S+ +
Sbjct: 341 DVDMAMTLFEEMQSEAVA-NYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHY 399
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAM-----IAGHAQMMDLAKDDL 363
I + + G+V+ A + M + W A+ + G ++ +A D+L
Sbjct: 400 ACIADMLGRAGMVERAYEFVQKMPIRPTISVWGALLNACRVYGEPELGKIAADNL 454
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/665 (32%), Positives = 358/665 (53%), Gaps = 18/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HAH V G + FV + LV++Y K + A+KVFD +P + V W ++I+G V+N
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ ++ VF DM+ G + T+ T L A + ++ +++G I +K D V
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG 244
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S++S C +++A F IR+ +++S+ +I NGE +++F ++L G + +
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVS 304
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T+ + V L + + +K G V ++ +Y + +D A++LFD
Sbjct: 305 SSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD 364
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSI 394
S + WNAMI+G+AQ +G TE A+S+F ++ ++ P+ T +SI
Sbjct: 365 ESSEKTVAAWNAMISGYAQ------------SGLTEMAISLFQEMMTTEFTPNPVTITSI 412
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ C++L AL G+ +H L ++ V TAL++MY KCG I AS++F S +
Sbjct: 413 LSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNT 472
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
++W +MI G+ H +AL+LF +ML G +P+ VTF+ L ACS+AG+V E F
Sbjct: 473 VTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHA 532
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M +Y+I+P+ +HY C++D+ R G +E+A +FI+KM EP +W + C H +
Sbjct: 533 MVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTN 592
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L A+E+L +L P + Y +L +I+ + A V+ ++ LS+T + I +
Sbjct: 593 LARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVN 652
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESASVY--HSE 689
+ F D H Q+ I+ L+EL K + GY+ + L D EE ++ HSE
Sbjct: 653 GTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSE 712
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFGL+ T + I ++K+ +C DCH K I+ +T R I+VRD+ R H F +G C
Sbjct: 713 KLAIAFGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGIC 772
Query: 750 TCRDF 754
+C D+
Sbjct: 773 SCGDY 777
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 197/394 (50%), Gaps = 16/394 (4%)
Query: 54 VRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR+ + +++ V + +G ++ +++ ++L + + I +K G H D
Sbjct: 180 VRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDD 239
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V+T L++V+ KC +++ A+ +F + + ++VS+ +LISG+ N + E A+ F ++L +
Sbjct: 240 YVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVS 299
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G ++ T+ + S + L I + VK T SV +L ++YS ++ A
Sbjct: 300 GQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLA 359
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F+ EK V +W +I ++G + F +M++ PN T+TSI S C +
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL 419
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+L G VH L N+ V +++ +Y KCG + EA +LFD S N VTWN MI
Sbjct: 420 GALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMI 479
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G+ H G EAL +F+++ G +P TF S+L CS + +G++
Sbjct: 480 FGYG-----------LHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDE 528
Query: 410 I-HALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
I HA+ K +V++ + G++E+A
Sbjct: 529 IFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKA 562
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/483 (26%), Positives = 227/483 (46%), Gaps = 32/483 (6%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA +++ G D +T L G A+ +F ++P+ ++ + LI G+ S
Sbjct: 28 HAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGF-SFSPD 86
Query: 157 ELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+I + +L+ P N T A++A LG +HA+ V + + V ++
Sbjct: 87 ASSISFYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVASA 143
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L LY + A K F+++ +++ + W T+I N ++ F M+++G++ +
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T+ ++ M ++VG + L +KLG+ + V ++ ++ KC VD A+ LF
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFG 263
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSI 394
+ +LV++NA+I+G + NG TE A+ F +L SG + T +
Sbjct: 264 MIRKPDLVSYNALISGFSC------------NGETECAVKYFRELLVSGQRVSSSTMVGL 311
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ + S L I +K+G + V TAL +Y + I+ A ++F E S +T+
Sbjct: 312 IPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTV 371
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+W +MI+G+A L+ A+ LF++M+ PN VT L+AC+ G AL + +
Sbjct: 372 AAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLG----ALSFGKS 427
Query: 515 MQKEYKIKPVMDHY---MCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCR 568
+ + K K + + LIDM+ + G I EA FD E N V W+ I G
Sbjct: 428 VHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS----EKNTVTWNTMIFGYG 483
Query: 569 RHG 571
HG
Sbjct: 484 LHG 486
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/714 (30%), Positives = 376/714 (52%), Gaps = 58/714 (8%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL+ ++ KS S A+ +HA ++K + ++ L+++Y + ++ ++F+ +
Sbjct: 11 ALLRNPLSIKSRSQAQQLHAQVLKFQA-SSLCNLSLLLSIYSHINLLHDSLRLFNTIHFP 69
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++W S+I Y + P ++ F+ ML +G YP + + L +C+ L + LG+ +H
Sbjct: 70 PALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLH 129
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSL-------------------------------- 226
Y+++ + D GN+L ++YS L
Sbjct: 130 GYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE 189
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+S K F + EK+++SW T+I NG + LR +M ++P+ FTL+S+ +
Sbjct: 190 DSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLI 249
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ + G ++H I+ G +++ V +S++ +Y KC V ++ ++F ++ + ++WN
Sbjct: 250 AENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWN 309
Query: 347 AMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
++IAG Q NG E L F ++ + +KP Y+FSSI+ C+ L L
Sbjct: 310 SIIAGCVQ------------NGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH 357
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+H + GF ++ + ++LV+MY KCG I A ++F M R ++SWT+MI G A
Sbjct: 358 LGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA 417
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H + A++LFE M G++ L ACS+ G+V EA YF M +++ I P +
Sbjct: 418 LHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGV 470
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY + D+ R G +EEA+DFI M P IW+ ++ CR H N+++ A ++L+
Sbjct: 471 EHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILE 530
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
+ P + +Y +L +I+ +A RW++ A + R + +T SWI +K+KVY+F D
Sbjct: 531 VDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 590
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNT 700
HP +I + ++ LVE + GY S D EE Y HSE+LAI FG++NT
Sbjct: 591 SHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGIINT 650
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P I V K+ +C DCH K I+ + REI+VRD+ R H F NG C+C D+
Sbjct: 651 PAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDY 704
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 203/423 (47%), Gaps = 53/423 (12%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P +SLG + +L G + + S+L+ C L+ E +H +I++ G D +
Sbjct: 87 PHQSLG--SFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTG 144
Query: 113 TFLVNVYGKCGNMEEA--------------------------------QKVFDNLPRINV 140
L+N+Y K +EE+ +K+F+ +P ++
Sbjct: 145 NALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDL 204
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSW ++I+G +N E + + +M A P + TL + L + I GK+IH
Sbjct: 205 VSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGC 264
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
++ + D V +SL +Y+ C + + + F + E++ +SW ++I C +NG +G
Sbjct: 265 SIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEG 324
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
LRFF +ML I+P ++ +SI C + +L +G Q+H + G+ N+ + +S++ +
Sbjct: 325 LRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDM 384
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG + A+++FD M ++V+W AMI G A H +A+ +F ++
Sbjct: 385 YAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCA-----------LHGQAPDAIELFEQME 433
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ G+K ++LT CS +++ + +++T G V A+ ++ + GR+
Sbjct: 434 TEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRL 486
Query: 440 ERA 442
E A
Sbjct: 487 EEA 489
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/779 (29%), Positives = 388/779 (49%), Gaps = 75/779 (9%)
Query: 2 ASVPWAAAAACTL------ETKSRQPSSSLATLK--DKNHTVSYQRSGSKLIQLNGNSEP 53
AS PW ++A L KSR + L + +T S+ + NS
Sbjct: 136 ASPPWLPSSASGLLKLMAPSRKSRSVNKGFLLLMRYPQANTWKMPAKASRRAYIQTNSP- 194
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F S+L+ +Y L+Q C R+S A+ +H H++K G D +V
Sbjct: 195 --HFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRN 252
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+N + C NM +A +VF+ ++ VSW S+++GY++ E A H++ M
Sbjct: 253 TLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM------- 305
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
E NS+ L+ G + A K F
Sbjct: 306 --------------------------------PERSIIASNSMIVLFGMRGLVVEACKLF 333
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + EK++++W+ +I +N + +R F M G+ +E S S C +L +
Sbjct: 334 DEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVN 393
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G +HSL +K+G S + ++N+++Y+Y KCG + A+KLFD ++L++WN+MI+G+
Sbjct: 394 MGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYL 453
Query: 354 Q--MMDLAK------------------DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
+ ++D AK + ++ E L++F ++ SG KPD T S
Sbjct: 454 KCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVS 513
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+++ C+RL ALEQG+ +HA + G +V++GT L++MY KCG +E A VF M +
Sbjct: 514 VISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKG 573
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+ +W ++I G A + L +L +F +M V PN++TF+G L AC + G+V E +F
Sbjct: 574 ISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFY 633
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M ++KI+P + HY C++D+ R G ++EA + + +M P+ W + C++HG+
Sbjct: 634 SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDS 693
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
E+G +L++L+P + +L +I+ S G+W+DV ++ + + ++ + S I
Sbjct: 694 EMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEA 753
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHS 688
++ F D HP I +L E+ K K GY + L D +ES HS
Sbjct: 754 NGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHS 813
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
EKLAIAFGL+N +PI ++K+ +C DCH K+I+ R+I+VRD R H F G
Sbjct: 814 EKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/614 (32%), Positives = 338/614 (55%), Gaps = 18/614 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
GP+ L+ C ++ E++H VK+G FV + L+++Y K G +E+
Sbjct: 119 GPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQG 178
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+VF+ + NVVSWT++I+G V + F +M + + T AL A +
Sbjct: 179 CRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADS 238
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ GK IH +K ++ + V N+L ++Y+ CG + ++ F ++R +V+SWTT+I
Sbjct: 239 SLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLI 298
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ GE + F +M + PN++T ++ S C + + + G Q+H ++LG
Sbjct: 299 STYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLV 358
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ L V NSI+ LY KCGL+ A +F G++ ++++W+ +I+ ++Q G
Sbjct: 359 NALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQ-------------G 405
Query: 369 G--TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EA S + G KP+ + SS+L++C + LEQG+Q+HA L G + +V
Sbjct: 406 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH 465
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+A+++MY KCG ++ AS++F M +ISWT+MI G+A H S +A+ LFE + G++
Sbjct: 466 SAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 525
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ V F+G L AC++AGMV YF +M Y+I P +HY CLID+ R G + EA
Sbjct: 526 PDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEH 585
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
I+ M F ++V+WS + CR HG+++ G + AEQLL+L P ++ L +I+ + GR
Sbjct: 586 IIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGR 645
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W++ A ++ L + + + + WSW+ + D++ +F D HPQS I VL L +
Sbjct: 646 WKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLL---SAN 702
Query: 667 FGYKQQESFELTDE 680
G QQE L ++
Sbjct: 703 IGDAQQEIRSLHED 716
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 253/552 (45%), Gaps = 63/552 (11%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLG 179
K G + +A+ +FD + + +SWT+LI+GYV S A+ +F +M + G +
Sbjct: 69 KQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMIS 128
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
AL AC+ +I G+ +H + VK V ++L +Y G + + F ++ +
Sbjct: 129 VALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTR 188
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I G ++GL +FS+M + + T L G +H
Sbjct: 189 NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIH 248
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK G+ + V N++ +Y KCG D +LF+ M ++V+W +I+ + QM +
Sbjct: 249 TQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGE-- 306
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
A+ F ++ S + P+ YTF+++++ C+ L A + GEQIH L+ G
Sbjct: 307 ---------EEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGL 357
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
++ + V +++ +Y KCG ++ AS VF ++ + +ISW+++I+ ++ + +A
Sbjct: 358 VNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSW 417
Query: 480 MLLAGVRPNQVTFVGALAAC-----------------------------------SNAGM 504
M G +PN+ L+ C S G
Sbjct: 418 MRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGS 477
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD---FEPNEVIWS 561
V EA F M KI ++ + +I+ + G +EA + +K+ +P+ V++
Sbjct: 478 VQEASKIFNGM----KINDIIS-WTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFI 532
Query: 562 VFIAGCRRHGNMELGFY---AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+ C G ++LGFY + ++ P E Y L+D+ AGR ++ +++ R
Sbjct: 533 GVLTACNHAGMVDLGFYYFMLMTNVYRISPSK-EHYGCLIDLLCRAGR---LSEAEHIIR 588
Query: 619 EEKLSETDDWSW 630
TDD W
Sbjct: 589 SMPF-HTDDVVW 599
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 12/238 (5%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA L+ EGPK + S+L C + L + +HAH++ G + V + +
Sbjct: 409 KEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAI 468
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG+++EA K+F+ + +++SWT++I+GY ++ + AI++F + G P
Sbjct: 469 ISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDY 528
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V LTAC+ + LG + Y+ L L G L+ A
Sbjct: 529 VMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIR 588
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN----EFTLTSISSVCG 287
+ + + W+T++ AC +G+ +G R+ ++ L + + PN TL +I + G
Sbjct: 589 SMPFHTDDVVWSTLLRACRVHGDVDRG-RWTAEQLLQ-LDPNSAGTHITLANIYAAKG 644
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 338/600 (56%), Gaps = 24/600 (4%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L C + +L E +H+ V+ G D ++ + L+ +Y +CG++ A++VFD + +V
Sbjct: 48 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 107
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
V +TSLIS + +N + ELA + ML+ G P T+ T LTAC + LG+QIH Y
Sbjct: 108 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGY 163
Query: 201 VVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++K SV +S L YS G A F+ + KNV+SW +++ +G
Sbjct: 164 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 223
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F M+SEG+ PNEF L+ + CG S+ +G Q+H IK +++RV N+++
Sbjct: 224 EALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALL 280
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFS 377
+Y + GLV+E + + + + + +LV+W I+ + Q NG G +A+++
Sbjct: 281 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQ------------NGFGEKAIALLC 328
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+++S G P+ Y FSS+L+ C+ + +L+QG Q H L LK G S++ G AL+NMY KCG
Sbjct: 329 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 388
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A F M T + SW S+I G A H +++AL++F M G++P+ TF+G L
Sbjct: 389 QMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 448
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
C+++GMV E +F +M +Y P HY C+IDM R G +EA I M FEP+
Sbjct: 449 GCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDA 508
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+IW +A C+ H N+++G AA++L++L +D SY ++ +I+ G WED V+
Sbjct: 509 LIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 568
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
E + + SWI I ++V++F D HP S I+++L ELV + F + E F++
Sbjct: 569 DETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDF--DELEPFDV 626
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/475 (28%), Positives = 241/475 (50%), Gaps = 38/475 (8%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+PR NVV+WTS++SGY +N +PE A+ +F DM+E+G P + AL AC+ L ++R G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+H+ V+ D +G+ L +YS CGSL +A + F+R+ +V+ +T++I A N
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-KLGYAS-NLR 312
GE +ML +G++PNE T+T+I + C +L G Q+H I K+G S ++
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVY 176
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+++ Y + G A+ +FD + N+V+W +M+ + + L EA
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRL-----------EEA 225
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L +F + S G+ P+ + S +L C ++ G Q+H +K ++D+ V AL++M
Sbjct: 226 LQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALLSM 282
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y + G +E + ++ L+SWT+ I+ + +A+ L M G PN F
Sbjct: 283 YGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAF 342
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFVR---LGCIEEAF 545
L++C++ + + + + + +K D +C LI+M+ + +G AF
Sbjct: 343 SSVLSSCADVASLDQGMQFHCL-----ALKLGCDSEICTGNALINMYSKCGQMGSARLAF 397
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLL 598
D + D W+ I G +HG N L ++ + +KP D +L+
Sbjct: 398 DVMHTHDVTS----WNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 448
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 58 GFQE-ALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF E A+++L +EG ++ S+L C + SL H +K G +
Sbjct: 318 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 377
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+N+Y KCG M A+ FD + +V SW SLI G+ Q+ A+ VF M G
Sbjct: 378 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 437
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P + T L C+ + G+ ++ +Y S + + G + A++
Sbjct: 438 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 497
Query: 232 AFNRIR-EKNVMSWTTVIGAC 251
N + E + + W T++ +C
Sbjct: 498 MINDMPFEPDALIWKTLLASC 518
>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 970
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/700 (34%), Positives = 377/700 (53%), Gaps = 53/700 (7%)
Query: 72 VQTSSYVSLLQE-----CVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVNVYGKCGN 124
V SYV LL L +H H++ TG DF V LVN+Y KCG+
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGS 364
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A++VF + + VSW S+I+G QNS A+ + M P + TL +++++
Sbjct: 365 IADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISS 424
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SL+ +LG+QIH +K + + SV N+L +LY+ G LN K F+ + E + +SW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSW 484
Query: 245 TTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
++IGA + ++ + + F L G + N T +S+ S ++ +G Q+H L +
Sbjct: 485 NSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
K A N+++ Y KCG +D +K+F MS + VTWN+MI+G+ LAK
Sbjct: 545 KYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAK-- 602
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
AL + + +G + D + ++++L+ + + LE+G ++HA +++ SD
Sbjct: 603 ---------ALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
VVVG+ALV+MY KCGR++ A R F M FAN L Q
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPL------------FANMKLDGQ---------- 691
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
P+ VTFVG L+ACS+AG++ E +FE M Y + P ++H+ C+ D+ R G ++
Sbjct: 692 --TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELD 749
Query: 543 EAFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ DFI+KM +PN +IW +V A CR +G ELG AAE L +L+P++ +Y +L ++
Sbjct: 750 KLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNM 809
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + GRWED+ + ++ + + +SW+ +KD V+ F D HP + I+K L EL
Sbjct: 810 YAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKEL 869
Query: 661 VEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL-LNTPIVSPILVVKSTTM 714
K + GY Q F L D +E YHSEKLA+AF L PI ++K+ +
Sbjct: 870 NRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV 929
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH+ K I+ + R+II+RDS R H F +G C+C DF
Sbjct: 930 CGDCHSAFKHISKIEGRQIILRDSNRFHHFQDGECSCSDF 969
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 254/500 (50%), Gaps = 29/500 (5%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+S +Q C+ + A++ H+ + K G +D ++ L+N Y + G+ A+KVFD +P
Sbjct: 7 LSFVQSCIGHRGA--AKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGK 195
N VSW ++SGY +N + + A+ DM++ G + + +AL AC L+S I G+
Sbjct: 65 RNCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGR 124
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
QIH + K D V N L S+Y C GSL A++AF+ ++ KN +SW ++I +
Sbjct: 125 QIHGLLFKLSYAVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQT 184
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTS-ISSVCG-TMLSLRVGAQVHSLGIKLGYASNLR 312
G+ + F M +G +P E+T S +++ C T +R+ Q+ K G+ ++L
Sbjct: 185 GDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLF 244
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V + ++ + K G + A+K+F+ M N VT N ++ G L G EA
Sbjct: 245 VGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVG-----------LVRQKWGEEA 293
Query: 373 LSIFSKLNSS-GMKPDLYT--FSSILTIC-SRLVALEQGEQIHALTLKTGFLSDVV-VGT 427
+F +NS + P+ Y SS + V L++G ++H + TG + +V +G
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
LVNMY KCG I A RVF M+ + +SW SMITG +S +A++ ++ M + P
Sbjct: 354 GLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILP 413
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAF 545
T + ++++C A + + LG ++ + K+ ++ + L+ ++ GC+ E
Sbjct: 414 GSFTLISSISSC--ASLKWAKLGQ-QIHGESLKLGIDLNVSVSNALMTLYAETGCLNECR 470
Query: 546 DFIKKMDFEPNEVIWSVFIA 565
M E ++V W+ I
Sbjct: 471 KIFSSMP-EHDQVSWNSIIG 489
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 256/536 (47%), Gaps = 41/536 (7%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E I I K+G D FV + LV+ + K G++ A+K+F+ + N V+ L+ G V+
Sbjct: 228 EQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSLIHARKIFNQMETRNAVTLNGLMVGLVRQ 287
Query: 154 SQPELAIHVFLDM--LEAGNYPTNVTLGTALTACSSLESIRL--GKQIHAYVVKYQTED- 208
E A +F+DM + + + V L ++ S E + L G+++H +V+ D
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+GN L ++Y+ CGS+ A + F + EK+ +SW ++I +N ++ + + M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMR 407
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
I P FTL S S C ++ ++G Q+H +KLG N+ V N++M LY + G ++
Sbjct: 408 RHEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLN 467
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
E +K+F M + V+WN++I A S+ EA++ F +G K +
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGALA----------SSERSLPEAVACFLNALRAGQKLNR 517
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TFSS+L+ S L E G+QIH L LK + AL+ Y KCG ++ ++F
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 449 MS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA----- 502
MS R ++W SMI+G+ ++ L +AL L M+ G R + + L+A ++
Sbjct: 578 MSERRDDVTWNSMISGYIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLER 637
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF--------- 553
GM A ++ + + L+DM+ + G ++ A F M
Sbjct: 638 GMEVHACSVRACLESDVVVGSA------LVDMYSKCGRLDYALRFFNTMPLFANMKLDGQ 691
Query: 554 -EPNEVIWSVFIAGCRRHGNMELGFYAAEQL---LKLKPKDCESYAMLLDIFVSAG 605
P+ V + ++ C G +E GF E + L P+ E ++ + D+ AG
Sbjct: 692 TPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPR-IEHFSCMADLLGRAG 746
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 28/190 (14%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ G ++ + Y ++L + +L +HA V+ D V + LV++Y KCG
Sbjct: 610 MMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALT 183
++ A + F+ +P +F +M L+ P +VT L+
Sbjct: 670 LDYALRFFNTMP-------------------------LFANMKLDGQTPPDHVTFVGVLS 704
Query: 184 ACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NV 241
ACS + G K + Y + + L G L+ ++ K NV
Sbjct: 705 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNV 764
Query: 242 MSWTTVIGAC 251
+ W TV+GAC
Sbjct: 765 LIWRTVLGAC 774
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/623 (33%), Positives = 347/623 (55%), Gaps = 39/623 (6%)
Query: 159 AIHVFLDMLEAGNYPTNV--TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
A+ +FL M + ++V +L AL +C++L LG +HA ++ D N+L
Sbjct: 32 AVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANAL 91
Query: 217 CSLYS--TCGSLNS---AI--------------KAFNRIREKNVMSWTTVIGACGENGEA 257
+LY C L+S AI K F+ + E++V+SW T++ C E G
Sbjct: 92 LNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRH 151
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L F KM EG +P+ FTL+++ + ++ G +VH + G+ S++ V +S+
Sbjct: 152 HEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSL 211
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIF 376
+ +Y C D + K+FD + + + WN+++AG AQ NG E AL IF
Sbjct: 212 IDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQ------------NGSVEEALGIF 259
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ +G++P TFSS++ +C L +L G+Q+HA + GF +V + ++L++MY KC
Sbjct: 260 RRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKC 319
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I A +F +MS+ ++SWT+MI G+A H + +AL LFE M L +PN +TF+ L
Sbjct: 320 GEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVL 379
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS+AG+V + YF+ M Y I P ++H+ L D R G ++EA++FI KM +P
Sbjct: 380 TACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQIKPT 439
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+WS + CR H N L A+++++L+P+ S+ +L +++ ++GRW + A ++
Sbjct: 440 ASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRES 499
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY--KQQES 674
R++ + + SWI +K K++ F +D HP I L+ E+ G+ ++
Sbjct: 500 MRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVPNTEDV 559
Query: 675 FELTDEESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
F+ +EE S HSEKLAI FG+++TP + I V+K+ +C DCH K I+ L R
Sbjct: 560 FQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFISKLADR 619
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EI+VRD+ R H F +G+C+C DF
Sbjct: 620 EIVVRDANRFHHFKDGNCSCGDF 642
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 189/393 (48%), Gaps = 32/393 (8%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVY-------------------GKCGNMEEAQKVFDNLP 136
+HA +++G+ D F L+N+Y G E +KVFD +
Sbjct: 72 LHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMI 131
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+VVSW +L+ G + + A+ M G P + TL T L + ++ G +
Sbjct: 132 ERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLE 191
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H + + + D VG+SL +Y+ C + ++K F+ + ++ + W +++ C +NG
Sbjct: 192 VHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGS 251
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L F +ML G++P T +S+ VCG + SLR G Q+H+ I G+ N+ + +S
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSS 311
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG + A +FD MS ++V+W AMI G+A H EAL +F
Sbjct: 312 LIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYA-----------LHGPAREALVLF 360
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKK 435
++ KP+ TF ++LT CS +++G + +++ G + + AL + +
Sbjct: 361 ERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGR 420
Query: 436 CGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
G ++ A +M + S W++++ H
Sbjct: 421 AGELDEAYNFISKMQIKPTASVWSTLLRACRVH 453
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 8/199 (4%)
Query: 60 QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + L G + ++ SL+ C N SL + +HA+++ G + F+ + L
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSL 312
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PT 174
+++Y KCG + A +FD + +VVSWT++I GY + A+ V + +E GN P
Sbjct: 313 IDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL-VLFERMELGNAKPN 371
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
++T LTACS + G K + Y +L G L+ A
Sbjct: 372 HITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFI 431
Query: 234 NRIREKNVMS-WTTVIGAC 251
++++ K S W+T++ AC
Sbjct: 432 SKMQIKPTASVWSTLLRAC 450
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 332/580 (57%), Gaps = 17/580 (2%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
A+TAC +++ G+Q+HA++VK + + L LY CG+L+ A + + E+
Sbjct: 46 AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT +I ++G + L F +ML G + NEFTL ++ + C S++ QVH
Sbjct: 106 NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVH 165
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
SL +K + S++ V +S++ +Y K G + EA+K+FD + + V+ A+I+G+AQ L
Sbjct: 166 SLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQ---LG 222
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
DD EAL +F +L SSGM+ + TF+++LT S L +L G+Q+H L L+
Sbjct: 223 LDD--------EALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKEL 274
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+V+ +L++MY KCG++ + RVF M R+ ISW +M+ G+ H + + +QLF
Sbjct: 275 PFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRT 334
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M V+P+ VT + L+ CS+ G+V E L F+++ KE + HY C+ID+ R G
Sbjct: 335 MT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSG 393
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+++A D I+ M FEP IW + CR H N+ +G A++LL ++P + +Y +L +
Sbjct: 394 QLQKALDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSN 453
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +AG W+DV V+ L E +++ SWI + +++F ++ HP+ +I + E
Sbjct: 454 IYAAAGMWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKE 513
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ K G+ S L D +E + HSEKLAI FGL+NTP I V+K+ +
Sbjct: 514 VYVDVKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRI 573
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHNF K ++ + REI +RD R H +G CTC D+
Sbjct: 574 CVDCHNFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDY 613
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 191/355 (53%), Gaps = 12/355 (3%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A S+ G + Y + + CV R++L +HAH+VK ++ T L+ +Y +
Sbjct: 29 ASSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVR 88
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG +++A+ V D +P NVVSWT++ISGY Q+ + A+ +F+ ML AG TL T
Sbjct: 89 CGALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATV 148
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
LT+C +SI+ +Q+H+ VVK E VG+SL +Y G++ A K F+ + E++
Sbjct: 149 LTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDT 208
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+S T +I + G + L F ++ S G+Q N T T++ + + SL G QVH L
Sbjct: 209 VSCTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGL 268
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
++ + ++NS++ +Y KCG + ++++FD M + ++WNAM+ G+ +
Sbjct: 269 ILRKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGR------- 321
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G E + +F + +KPD T ++L+ CS +++G I L +K
Sbjct: 322 ----HGIGQEVVQLFRTMTEE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK 371
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 93/183 (50%), Gaps = 12/183 (6%)
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
S L G + + + +T C AL +G Q+HA +K + V + T L+ +Y +C
Sbjct: 30 SSLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC 89
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G ++ A V M R ++SWT+MI+G++ +AL+LF ML AG + N+ T L
Sbjct: 90 GALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVL 149
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEA---FDFIK 549
+C V++++ E + +K + +M L+DM+ + G I+EA FD +
Sbjct: 150 TSCP----VHQSIQQVEQVH-SLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLP 204
Query: 550 KMD 552
+ D
Sbjct: 205 ERD 207
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVNVYGKCGN 124
+ G + ++ +LL SL+ + +H I++ FF++ L+++Y KCG
Sbjct: 236 SSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILR--KELPFFIVLQNSLIDMYSKCGK 293
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +++VFDN+P+ + +SW +++ GY ++ + + +F M E P +VTL L+
Sbjct: 294 LLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEVK-PDSVTLLAVLSG 352
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EKNV 241
CS + G I +VK Q +G+ C L G L A+ + E
Sbjct: 353 CSHGGLVDEGLDIFDLIVKEQNA-VIHIGHYGCVIDLLGRSGQLQKALDLIEHMPFEPTP 411
Query: 242 MSWTTVIGAC 251
W +++GAC
Sbjct: 412 AIWGSLLGAC 421
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/707 (30%), Positives = 382/707 (54%), Gaps = 26/707 (3%)
Query: 59 FQEALSVLTE------GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
++EAL + E P T S S+L N + + +H +K+G + V
Sbjct: 188 YEEALEIYHELRNSWIVPDSFTVS--SVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVN 245
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+ +Y K +A++VFD + + V++ ++I GY++ E ++ +FL+ L+
Sbjct: 246 NGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFK- 304
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P +T+ + L AC L + L K I+ Y+++ +++V N L +Y+ CG + +A
Sbjct: 305 PDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDV 364
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
FN + K+ +SW ++I ++G+ ++ ++ F M+ Q + T + S+ + L
Sbjct: 365 FNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADL 424
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
+ G +HS GIK G +L V N+++ +Y KCG V ++ K+F+ M ++ VTWN +I+
Sbjct: 425 KFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISAC 484
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ D A L + +++ + + PD+ TF L +C+ L A G++IH
Sbjct: 485 VRFGDFAT-----------GLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHC 533
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L+ G+ S++ +G AL+ MY KCG +E + RVF MS R +++WT MI + + +
Sbjct: 534 CLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEK 593
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
AL+ F DM +G+ P+ V F+ + ACS++G+V + L FE M+ YKI P+++HY C++
Sbjct: 594 ALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVV 653
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
D+ R I +A +FI+ M EP+ IW+ + CR G+ME + ++++L P D
Sbjct: 654 DLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPG 713
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
+ + + + +W+ V++++ R++ + + +SWI I KV+ F D PQS
Sbjct: 714 YSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEA 773
Query: 653 IFKVLDELVEKAKCFGY------KQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPI 706
I K L+ L GY Q E ++ HSE+LAIAFGLLNT +P+
Sbjct: 774 IHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPL 833
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
V+K+ +C DCH K+I+ + REI+VRD+ R H F +G C+C+D
Sbjct: 834 QVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKD 880
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 148/650 (22%), Positives = 304/650 (46%), Gaps = 74/650 (11%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYV 78
R P+SSL+ + + + S + + N ++L F L P T +
Sbjct: 53 RAPASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYT--FP 110
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C ++++ I++ G D +V LV++Y + G + A++VFD +P
Sbjct: 111 SVIKACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR 170
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++VSW SLISGY + E A+ ++ ++ + P + T+ + L A ++L ++ G+ +H
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLH 230
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ +K + V N L ++Y A + F+ + ++ +++ T+I +
Sbjct: 231 GFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVE 290
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ ++ F + L + +P+ T+TS+ CG + L + +++ ++ G+ V+N ++
Sbjct: 291 ESVKMFLENLDQ-FKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILI 349
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG + A+ +F+ M + V+WN++I+G+ Q DL EA+ +F
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-----------MEAMKLFKM 398
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + D T+ ++++ +RL L+ G+ +H+ +K+G D+ V AL++MY KCG
Sbjct: 399 MMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGE 458
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ + ++F M T ++W ++I+ LQ+ M V P+ TF+ L
Sbjct: 459 VGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPM 518
Query: 499 CSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM---- 551
C A + + LG + +++ Y+ + + + LI+M+ + GC+E +F ++M
Sbjct: 519 C--ASLAAKRLGKEIHCCLLRFGYESELQIGN--ALIEMYSKCGCLESSFRVFERMSRRD 574
Query: 552 -------------------------DFE-----PNEVIWSVFIAGCRRHGNMELGFYAAE 581
D E P+ V++ I C G +E G E
Sbjct: 575 VVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFE 634
Query: 582 QL---LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
++ K+ P E YA ++D+ L+R +K+S+ +++
Sbjct: 635 KMKTHYKIDPM-IEHYACVVDL---------------LSRSQKISKAEEF 668
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 234/500 (46%), Gaps = 15/500 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLI 147
+L+ IHA ++ G F L++ Y + VF + P NV W S+I
Sbjct: 19 NLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSII 78
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
+ +N A+ + + E+ P T + + AC+ L +G ++ +++ E
Sbjct: 79 RAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFE 138
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D VGN+L +YS G L+ A + F+ + ++++SW ++I +G + L + ++
Sbjct: 139 SDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ I P+ FT++S+ +L ++ G +H +K G S V N ++ +YLK
Sbjct: 199 RNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRP 258
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+A+++FD M + VT+N MI G+ ++ + E++ +F + N KPD
Sbjct: 259 TDARRVFDEMVVRDSVTYNTMICGYLKLEMV-----------EESVKMFLE-NLDQFKPD 306
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ T +S+L C L L + I+ L+ GF+ + V L+++Y KCG + A VF
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFN 366
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M + +SW S+I+G+ +A++LF+ M++ + + +T++ ++ + +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKF 426
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
G K I + LIDM+ + G + ++ M + V W+ I+ C
Sbjct: 427 GKGLHSNGIKS-GIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG-TLDTVTWNTVISAC 484
Query: 568 RRHGNMELGFYAAEQLLKLK 587
R G+ G Q+ K K
Sbjct: 485 VRFGDFATGLQVTTQMRKNK 504
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/398 (27%), Positives = 208/398 (52%), Gaps = 20/398 (5%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ AL++ S+L +R +IHA V+ + L YS + S++ F R+
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVS 66
Query: 238 E-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
KNV W ++I A +NG + L F+ K+ + P+++T S+ C + +G
Sbjct: 67 PAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
V+ +++G+ S+L V N+++ +Y + GL+ A+++FD M +LV+WN++I+G+
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGY---- 182
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
S+H EAL I+ +L +S + PD +T SS+L + L+ ++QG+ +H TLK
Sbjct: 183 -------SSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLK 235
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+G S VV L+ MY K R A RVF EM R +++ +MI G+ + +++++
Sbjct: 236 SGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKM 295
Query: 477 FEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
F + L +P+ +T L AC + + Y M++ + ++ + + LID++
Sbjct: 296 FLEN-LDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKN--ILIDVY 352
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+ G + A D M+ + + V W+ I+G + G++
Sbjct: 353 AKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDL 389
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/710 (32%), Positives = 367/710 (51%), Gaps = 68/710 (9%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
T LV Y + A FD +P R + V ++IS Y + S A+ VF +L +G
Sbjct: 92 TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 171 NY-PTNVTLGTALTACSSLE--SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ P + + L+A L S+R Q+H V+K SV N+L +LY C S
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 228 S---AIKAFNRIREKNVMSWTTVI------GACG-------------------------E 253
+ A K + + K+ ++WTT++ G G
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVH 271
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY----AS 309
+G AV+ F +M+ E + +EFT TS+ S C + G VH I+L +
Sbjct: 272 SGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEA 331
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA-------- 359
L V N+++ Y KCG + A+++FD M+ ++V+WN +++G+ + +D A
Sbjct: 332 ALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 360 -KDDLS--------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
K++LS H G E AL +F+K+ S +KP YT++ + C L AL+ G+Q
Sbjct: 392 YKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQ 451
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H ++ GF G AL+ MY +CG ++ A +F+ M +SW +MI+ H
Sbjct: 452 LHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGH 511
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL+LF+ M+ G+ P++++F+ L AC+++G+V E YFE M++++ I P DHY
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYT 571
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
LID+ R G I EA D IK M FEP IW ++GCR G+MELG +AA+QL K+ P+
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+Y +L + + +AG W D A V+ L R+ + + SWI +KV+ F D HP+
Sbjct: 632 HDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPE 691
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVS 704
+ E++K L+ + K + GY L D +E HSE+LA+ FGLLN P +
Sbjct: 692 AHEVYKFLEMVGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGA 751
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ V+K+ +C DCH I ++ REI+VRD +R H F +G C+C ++
Sbjct: 752 TVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNY 801
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 207/445 (46%), Gaps = 56/445 (12%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++ V+L +C + ++ +A ++ ++D T +V Y + G++ A+ VF+
Sbjct: 198 NALVALYMKCESPEATRDAR----KVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEE 253
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ V W ++ISGYV + A +F M+ T + L+AC+++ G
Sbjct: 254 VDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHG 313
Query: 195 KQIHAYVVKYQ----TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
K +H +++ Q E V N+L + YS CG++ A + F+ + K+V+SW T++
Sbjct: 314 KSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSG 373
Query: 251 CGEN-------------------------------GEAVQGLRFFSKMLSEGIQPNEFTL 279
E+ G A L+ F+KM SE ++P ++T
Sbjct: 374 YVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTY 433
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+ CG + +L+ G Q+H ++LG+ + N+++ +Y +CG V EA +F M +
Sbjct: 434 AGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPN 493
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
++ V+WNAMI+ L H G EAL +F ++ + G+ PD +F ++LT C+
Sbjct: 494 IDSVSWNAMISA-----------LGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
Query: 400 RLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-W 457
+++G ++ G + T L+++ + GRI A + M S W
Sbjct: 543 HSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIW 602
Query: 458 TSMITGFANHS----LSHQALQLFE 478
++++G +H A QLF+
Sbjct: 603 EAILSGCRTSGDMELGAHAADQLFK 627
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+E K +Y + C +L + + +H HIV+ G L+ +Y +CG ++
Sbjct: 423 SENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVK 482
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
EA +F +P I+ VSW ++IS Q+ A+ +F M+ G YP ++ T LTAC+
Sbjct: 483 EAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Cucumis sativus]
Length = 746
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 239/734 (32%), Positives = 395/734 (53%), Gaps = 27/734 (3%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
K++ V+Y S +Q++ N + V L F +A + G K+ + L C +L
Sbjct: 29 KSNIVTYNSLISGYVQMS-NLDKVMIL-FDKARRL---GLKLDKYNCAGALTACSQSGNL 83
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
S ++IH I+ G + L+++Y KCG ++ A+ +FD+ +++ VSW SLI+GY
Sbjct: 84 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 143
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS-LESIRL-GKQIHAYVVKYQTED 208
VQN + E + + M + G TLG+AL ACSS ++ G +H + +K
Sbjct: 144 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL 203
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA-----CGENGEAVQGLRF 263
D VG +L +Y+ GSL+ AI+ F+++ +KNV+ + ++ E+ A + L
Sbjct: 204 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 263
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F +M S GI+P+ FT +S+ C + + QVH+L K G S+ + + ++ LY
Sbjct: 264 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 323
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSS 382
G + +A F+ + ++ +V AMI G+ Q NG E ALS+F +L +
Sbjct: 324 LGSMMDALLCFNSIHNLTIVPMTAMIFGYLQ------------NGEFESALSLFYELLTY 371
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
KPD + FS+I++ C+ + L GEQI K G + + + MY K G + A
Sbjct: 372 EEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAA 431
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+ F +M ++SW++MI A H + +AL+ FE M G+ PN F+G L ACS+
Sbjct: 432 NLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 491
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G+V E L YF+ M+K+YK+K + H +C++D+ R G + +A I ++ FE V+W
Sbjct: 492 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 551
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
++ CR H + A+++++L+P SY +L +I++ AG + V+ L E ++
Sbjct: 552 LLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRI 611
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF-GYKQQESFELTDEE 681
+ SWI+I DKVYSF D H S +I+ LDE++ K K +++ E
Sbjct: 612 KKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEH 671
Query: 682 SASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
+V YHSEKLA+AFG+L +P+ V+K+ +C DCH +K+ + + RE+IVRDS R
Sbjct: 672 LTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVR 731
Query: 741 LHKFVNGHCTCRDF 754
H F +G C+C D+
Sbjct: 732 FHHFKDGSCSCGDY 745
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 18/458 (3%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG+ A K+FD + + N+V++ SLISGYVQ S + + +F G
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
ALTACS ++ GK IH ++ Y + NSL +YS CG ++ A F+ + +
Sbjct: 73 ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS--LRVGAQV 298
+SW ++I +NG+ + L KM G+ N +TL S C + + G +
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H IKLG ++ V +++ +Y K G +D+A ++FD M N+V +NAM+AG Q +
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI 252
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+D A+ +AL++F ++ S G+KP ++T+SS+L C + + +Q+HAL K G
Sbjct: 253 --EDKCAY----KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNG 306
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
LSD +G+ L+++Y G + A F + T++ T+MI G+ + AL LF
Sbjct: 307 LLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFY 366
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDM 534
++L +P++ F +++C+N GM+ E +Q + K + + I M
Sbjct: 367 ELLTYEEKPDEFIFSTIMSSCANMGMLRSG----EQIQG-HATKVGISRFTIFQNSQIWM 421
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ + G + A ++M+ P+ V WS I +HG+
Sbjct: 422 YAKSGDLYAANLTFQQME-NPDIVSWSTMICSNAQHGH 458
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 181/395 (45%), Gaps = 53/395 (13%)
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CG SA K F+++ + N++++ ++I + + + F K G++ +++
Sbjct: 14 CGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAGA 73
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+ C +L G +H L + G S + + NS++ +Y KCG VD A+ LFD ++
Sbjct: 74 LTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDG 133
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WN++IAG+ Q NG E L+I K++ +G+ + YT S L CS
Sbjct: 134 VSWNSLIAGYVQ------------NGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSN 181
Query: 402 VALEQ--GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
+ G +H +K G DVVVGTAL++MY K G ++ A ++F +M + ++ + +
Sbjct: 182 FNGCKMFGTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNA 241
Query: 460 MITGFANH-----SLSHQALQLFEDMLLAGVRPNQVTFVGALAAC------SNAGMVYEA 508
M+ G +++AL LF +M G++P+ T+ L AC A V+
Sbjct: 242 MMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHAL 301
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE------------AFDFIKKMDFE-- 554
+ ++ EY ++D Y L M L C F +++ +FE
Sbjct: 302 MCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESA 361
Query: 555 -------------PNEVIWSVFIAGCRRHGNMELG 576
P+E I+S ++ C G + G
Sbjct: 362 LSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSG 396
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG A ++F +MS ++++ S+I+G+ S + + LF+ G++ ++ G
Sbjct: 13 KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKM 551
AL ACS +G + A + Y + + LIDM+ + G ++ A FD K+
Sbjct: 73 ALTACSQSGNL-SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL 131
Query: 552 DFEPNEVIWSVFIAGCRRHGNME 574
D V W+ IAG ++G E
Sbjct: 132 D----GVSWNSLIAGYVQNGKYE 150
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 207/600 (34%), Positives = 338/600 (56%), Gaps = 24/600 (4%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L C + +L E +H+ V+ G D ++ + L+ +Y +CG++ A++VFD + +V
Sbjct: 121 LVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDV 180
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
V +TSLIS + +N + ELA + ML+ G P T+ T LTAC + LG+QIH Y
Sbjct: 181 VGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGY 236
Query: 201 VVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
++K SV +S L YS G A F+ + KNV+SW +++ +G
Sbjct: 237 LIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLE 296
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L+ F M+SEG+ PNEF L+ + CG S+ +G Q+H IK +++RV N+++
Sbjct: 297 EALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVSNALL 353
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFS 377
+Y + GLV+E + + + + + +LV+W I+ + Q NG G +A+++
Sbjct: 354 SMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQ------------NGFGEKAIALLC 401
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+++S G P+ Y FSS+L+ C+ + +L+QG Q H L LK G S++ G AL+NMY KCG
Sbjct: 402 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 461
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A F M T + SW S+I G A H +++AL++F M G++P+ TF+G L
Sbjct: 462 QMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 521
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
C+++GMV E +F +M +Y P HY C+IDM R G +EA I M FEP+
Sbjct: 522 GCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDA 581
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+IW +A C+ H N+++G AA++L++L +D SY ++ +I+ G WED V+
Sbjct: 582 LIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 641
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
E + + SWI I ++V++F D HP S I+++L ELV + F + E F++
Sbjct: 642 DETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQDF--DELEPFDI 699
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/494 (28%), Positives = 251/494 (50%), Gaps = 38/494 (7%)
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+N K G + +A +FD +PR NVV+WTS++SGY +N +PE A+ +F DM+E+G P +
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPND 114
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
AL AC+ L ++R G+Q+H+ V+ D +G+ L +YS CGSL +A + F+R
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ +V+ +T++I A NGE +ML +G++PNE T+T+I + C +L G
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----G 230
Query: 296 AQVHSLGI-KLGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
Q+H I K+G S ++ +++ Y + G A+ +FD + N+V+W +M+ +
Sbjct: 231 QQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYI 290
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ L EAL +F + S G+ P+ + S +L C ++ G Q+H
Sbjct: 291 RDGRL-----------EEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCS 336
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K ++D+ V AL++MY + G +E + ++ L+SWT+ I+ + +A
Sbjct: 337 AIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKA 396
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--- 530
+ L M G PN F L++C++ + + + + + +K D +C
Sbjct: 397 IALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCL-----ALKLGCDSEICTGN 451
Query: 531 -LIDMFVR---LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLL 584
LI+M+ + +G AFD + D W+ I G +HG N L ++ +
Sbjct: 452 ALINMYSKCGQMGSARLAFDVMHTHDV----TSWNSLIHGHAQHGDANKALEVFSKMRSN 507
Query: 585 KLKPKDCESYAMLL 598
+KP D +L+
Sbjct: 508 GIKPDDSTFLGVLM 521
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DVV+ +N K GR+ A +F M + +++WTS+++G+ + AL +F DM+
Sbjct: 47 DVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYM--CLIDMFVRL 538
+GV PN AL AC++ G AL E + + D ++ CLI+M+ R
Sbjct: 107 ESGVAPNDFACNAALVACADLG----ALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
G + A + +MD P+ V ++ I+ R+G EL A Q+LK LKP +
Sbjct: 163 GSLPAAKEVFDRMD-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 215
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 58 GFQE-ALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF E A+++L +EG ++ S+L C + SL H +K G +
Sbjct: 391 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 450
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+N+Y KCG M A+ FD + +V SW SLI G+ Q+ A+ VF M G
Sbjct: 451 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 510
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P + T L C+ + G+ ++ +Y S + + G + A++
Sbjct: 511 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 570
Query: 232 AFNRIR-EKNVMSWTTVIGAC 251
N + E + + W T++ +C
Sbjct: 571 MINDMPFEPDALIWKTLLASC 591
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/717 (32%), Positives = 378/717 (52%), Gaps = 34/717 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVN---RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
+L EG + + + VS+ C N R L + IH + G H F L+ +Y K
Sbjct: 104 MLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKG-HWRTFSNNALMAMYAK 162
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G +++A+ + ++V+W S+IS + QN + A+ M+ G P VT +
Sbjct: 163 LGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASV 222
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTED---DTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L ACS L+ +R GK+IHAY ++ T+D ++ VG++L +Y CG + S F+ + +
Sbjct: 223 LPACSHLDLLRTGKEIHAYALR--TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLD 280
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ + W +I ++ + L F +M + G+ N T++SI +
Sbjct: 281 RKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEG 340
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H IK G +N ++N+++ +Y + G + ++++FD M ++V+WN +I +
Sbjct: 341 IHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGR 400
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSG---------MKPDLYTFSSILTICSRLVALEQGE 408
+ L H E I K G KP+ T ++L C+ L AL +G+
Sbjct: 401 SSDALLLLH----EMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGK 456
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+IHA ++ S V VG+ALV+MY KCG + A RVF +M R +I+W +I + H
Sbjct: 457 EIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHG 516
Query: 469 LSHQALQLFEDMLLAG-----VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
++L+LFEDM+ G V+P +VTF+ A+CS++GMV E L F M+ E+ I+P
Sbjct: 517 KGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEP 576
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQ 582
DHY C++D+ R G +EEA+ + M ++V WS + CR + N+E+G AAE
Sbjct: 577 APDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAEN 636
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
LL+L+P Y +L +I+ SAG W+ ++ + + + SWI D+V+ F
Sbjct: 637 LLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLA 696
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESASVY--HSEKLAIAFGL 697
D HPQS ++ L+ L E+ K GY + L D EE ++ HSEKLAIAFG+
Sbjct: 697 GDLSHPQSEKLHDFLETLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGI 756
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
LNTP + I V K+ +C DCH K I+ + REII+RD++R H F +G C+C D+
Sbjct: 757 LNTPPGTTIRVAKNLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDY 813
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 256/523 (48%), Gaps = 45/523 (8%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVK--TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ ++L+ + L + IHAH+ K GS + LVN+YGKCG + +A KVFD
Sbjct: 12 AFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFD 71
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ES 190
+ + VSW S+IS + + E+AI F ML G P++ TL + ACS+L +
Sbjct: 72 RITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDG 131
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ LGKQIH + + T N+L ++Y+ G L+ A ++++++W ++I +
Sbjct: 132 LWLGKQIHGCCFR-KGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISS 190
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL-GYAS 309
+N ++ L F M+ EG++P+ T S+ C + LR G ++H+ ++
Sbjct: 191 FSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE 250
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V ++++ +Y CG V+ + +FD + + WNAMIAG+AQ S H+
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQ---------SEHD-- 299
Query: 370 TEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL +F ++ ++G+ + T SSI+ R + + E IH +K G ++ + A
Sbjct: 300 EKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNA 359
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL------ 482
L++MY + G I+ + R+F M R ++SW ++IT + S AL L +M
Sbjct: 360 LIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKST 419
Query: 483 ----------AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--- 529
+PN +T + L C++ AL + + Y I+ ++ +
Sbjct: 420 YDGDYNDEKQVPFKPNSITLMTVLPGCAS----LSALAKGKEIHA-YAIRNLLASQVTVG 474
Query: 530 -CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
L+DM+ + GC+ A +M N + W+V I HG
Sbjct: 475 SALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMHG 516
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 208/415 (50%), Gaps = 30/415 (7%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYSTC 223
M+ +G P N L A + ++ + LGKQIHA+V K Y + ++ N+L ++Y C
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G L A K F+RI E++ +SW ++I A E ++ F ML EG +P+ FTL S++
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 284 SVCGTML---SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
C + L +G Q+H + G+ N++M +Y K G +D+A+ L
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS-NNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+LVTWN+MI+ +Q + EAL + G+KPD TF+S+L CS
Sbjct: 180 DLVTWNSMISSFSQ-----------NERFMEALMFLRLMVLEGVKPDGVTFASVLPACSH 228
Query: 401 LVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L L G++IHA L+T + + VG+ALV+MY CG++E VF + R + W +
Sbjct: 229 LDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNA 288
Query: 460 MITGFANHSLSHQALQLFEDM-LLAGVRPNQVT---FVGALAACSNAGMVYEALGYFEMM 515
MI G+A +AL LF +M AG+ N T V A C GY ++
Sbjct: 289 MIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGY--VI 346
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEP-NEVIWSVFIAG 566
++ + + + LIDM+ R+G I+ + FD ++ D N +I S I G
Sbjct: 347 KRGLETNRYLQN--ALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICG 399
>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/566 (35%), Positives = 340/566 (60%), Gaps = 16/566 (2%)
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G HA +++ DT N L ++YS CG + SA K F+ + ++++SW T++G+ +
Sbjct: 66 GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 125
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG+ + L F +M EG +EFT++S+ C + Q+H +K SN+ V
Sbjct: 126 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 185
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+++ +Y KCGLV +A +F+ M + VTW++M+AG+ Q ++L EAL
Sbjct: 186 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQ------NELY-----EEAL 234
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F + + G++ + +T SS L+ C+ AL +G+Q+ A++ KTG S++ V ++L++MY
Sbjct: 235 VLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMY 294
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE A VF + + ++ W ++++GF+ H S +A+ FE M G+ PN +T++
Sbjct: 295 AKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYI 354
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L+ACS+ G+V + YF++M + + + P + HY C++D+ R G + EA DFI +M F
Sbjct: 355 SVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPF 414
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ +W +A CR + N+EL AA+ L +++P + ++ +L +I+ + RWE+VA
Sbjct: 415 DATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARA 474
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+NL +E K + SWI IK KV+SF + HP+ EI+ L++LV + K GYK +
Sbjct: 475 RNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKT 534
Query: 674 SFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
+L D E + +HSEKLA+ FG++ P +PI ++K+ +C DCH+F+K+ +S+
Sbjct: 535 EHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSI 594
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T REIIVRD+ R H F NG+C+C +F
Sbjct: 595 TEREIIVRDTNRFHHFKNGYCSCGEF 620
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 207/394 (52%), Gaps = 17/394 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEI----IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+++VS LQ + + + A I HA I++ G D L+N+Y KCG +E A+K
Sbjct: 44 ATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 103
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P ++VSW +++ + QN E A+ +F+ M + G + T+ + + AC++
Sbjct: 104 LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCC 163
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ KQ+H + +K + + VG +L +Y+ CG + A F + E++ ++W++++
Sbjct: 164 VFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAG 223
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+N + L F + + G++ N+FT++S S C +L G QV ++ K G SN
Sbjct: 224 YVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN 283
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +S++ +Y KCG+++EA +F + N+V WNA+++G S H
Sbjct: 284 IFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSG-----------FSRHVRSL 332
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTAL 429
EA+ F K+ G+ P+ T+ S+L+ CS L +E+G + L ++ +S +V+ + +
Sbjct: 333 EAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCM 392
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
V++ + G + A M S W S++
Sbjct: 393 VDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 14/336 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG+ E L Q + EG + S++ C + + + +H +KT
Sbjct: 126 NGDCEKALVLFMQ----MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDS 181
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ FV T L++VY KCG +++A VF+ +P + V+W+S+++GYVQN E A+ +F
Sbjct: 182 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 241
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G T+ +AL+AC++ ++ GKQ+ A K + V +SL +Y+ CG +
Sbjct: 242 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 301
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F+ + EKNV+ W ++ + +++ + +F KM GI PN+ T S+ S C
Sbjct: 302 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 361
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL-KCGLVDEAQKLFDGMS-HVNLVTW 345
+ + G + L I++ S + S M L + GL+ EA+ D M W
Sbjct: 362 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMW 421
Query: 346 NAMIAG-----HAQMMDLAKD---DLSAHNGGTEAL 373
+++A + ++ ++A ++ HN G L
Sbjct: 422 GSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVL 457
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L +R A +G HA ++ G +D + L+NMY KCG +E A ++F EM R+
Sbjct: 53 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 112
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L+SW +M+ + +AL LF M G ++ T + AC+ V+E
Sbjct: 113 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC----- 167
Query: 514 MMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ +K +D + L+D++ + G +++A + M E ++V WS +AG
Sbjct: 168 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP-ERSDVTWSSMVAG 223
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/580 (35%), Positives = 333/580 (57%), Gaps = 18/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C + ++R G+++HA+++K + L LY+ C L A F+ +RE+NV
Sbjct: 17 LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNV 76
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT +I + G A + L F +ML +PNEFT ++ S C +G Q+HS
Sbjct: 77 VSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSH 136
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
K Y +++ V +S++ +Y K G + EA+ +F+ + ++V+ A+I+G+AQ L D
Sbjct: 137 IFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQ---LGLD 193
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL +F +L GM + T++S+LT S L AL+ G+Q+H+ L+
Sbjct: 194 E--------EALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPF 245
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
VV+ +L++MY KCG + A ++F M RT+ISW +M+ G++ H + ++LF+ M
Sbjct: 246 YVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMR 305
Query: 482 LAG-VRPNQVTFVGALAACSNAGMVYEALGYF-EMMQKEYKIKPVMDHYMCLIDMFVRLG 539
V+P+ VTF+ L+ CS+ G+ + L F EMM +I+ ++HY C+ID+ R G
Sbjct: 306 EENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAG 365
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+EEAF+ IKKM FEP IW + CR H N +G + +LL+++P++ +Y +L +
Sbjct: 366 RVEEAFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSN 425
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ SAGRWEDV V+ L E+ + + SWI + +++F +D HP+ E+F + E
Sbjct: 426 LYASAGRWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRE 485
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L+ K K GY +S L D +E + HSEKLA+AFGL++T P+ V+K+ +
Sbjct: 486 LLVKFKESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRI 545
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHNF K ++ + R++ +RD R H G C+C D+
Sbjct: 546 CVDCHNFAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDY 585
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/407 (29%), Positives = 213/407 (52%), Gaps = 19/407 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+GP+++ Y LL ECVN++++ + +HAH++KT ++ T L+ +Y KC +
Sbjct: 4 QGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGC 63
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD + NVVSWT++ISGY Q A+H+F+ ML + P T T L++C+
Sbjct: 64 ARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTG 123
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
LG+QIH+++ K E+ VG+SL +Y+ G ++ A F + E++V+S T +
Sbjct: 124 FSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAI 183
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + G + L F ++ EG+ N T S+ + + +L G QVHS ++
Sbjct: 184 ISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCEL 243
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ ++NS++ +Y KCG ++ A+K+F+ M +++WNAM+ G+ S H
Sbjct: 244 PFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGY-----------SKHG 292
Query: 368 GGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G E + +F + +KPD TF ++L+ CS ++G ++ + G ++ G
Sbjct: 293 KGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG--DEIEAG 350
Query: 427 T----ALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS 468
++++ + GR+E A + +M T W S++ HS
Sbjct: 351 IEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVHS 397
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
++ +L C A+ +G+++HA +KT +L V + T L+ +Y KC + A VF EM
Sbjct: 13 YNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR 72
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEAL 509
R ++SWT+MI+G++ + +AL LF ML + PN+ TF L++C+ +G
Sbjct: 73 ERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQ 132
Query: 510 GYFEMMQKEYKIKPVMDHYMC---LIDMFVRLGCIEEA 544
+ + ++ Y+ +H L+DM+ + G I EA
Sbjct: 133 IHSHIFKRNYE-----NHIFVGSSLLDMYAKAGRIHEA 165
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 338/618 (54%), Gaps = 14/618 (2%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L G ++ S+++ C + +H H++K+G L+++Y K
Sbjct: 170 IQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKF 229
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
G + A VF + +++SW S+I+G+ Q A+++F DM G Y P G+
Sbjct: 230 GQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSV 289
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+AC SL G+QI K+ + G SLC +Y+ G L SA +AF +I ++
Sbjct: 290 FSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDL 349
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW +I A N + + + FF +M+ G+ P++ T ++ CG+ ++L G Q+HS
Sbjct: 350 VSWNAIIAALA-NSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSY 408
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAK 360
IK+G V NS++ +Y KC + +A +F +S + NLV+WNA+++ +Q
Sbjct: 409 IIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQ------ 462
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H EA +F + S KPD T ++IL C+ LV+LE G Q+H ++K+G +
Sbjct: 463 -----HKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLV 517
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
DV V L++MY KCG ++ A VF ++SW+S+I G+A L +AL LF M
Sbjct: 518 VDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMM 577
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
GV+PN+VT++G L+ACS+ G+V E + M+ E I P +H C++D+ R GC
Sbjct: 578 RNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGC 637
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ EA +FIKK F+P+ +W +A C+ HGN+++ AAE +LKL P + + +L +I
Sbjct: 638 LYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNI 697
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
SAG W++VA ++NL ++ + + SWI +KD+++ F D HPQ I+ +L++L
Sbjct: 698 HASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDL 757
Query: 661 VEKAKCFGYKQQESFELT 678
+ GY + +++
Sbjct: 758 WLQMLDDGYDPCQRLDIS 775
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 166/572 (29%), Positives = 284/572 (49%), Gaps = 49/572 (8%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+++ S+YV+L+ C N +SL + IH HI+K+ D + ++N+YGKCG++++A+K
Sbjct: 77 QLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARK 136
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
FD + +VVSWT +ISGY QN Q AI +++ ML +G +P +T G+ + AC
Sbjct: 137 AFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGD 196
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
I LG Q+H +V+K + N+L S+Y+ G + A F I K+++SW ++I
Sbjct: 197 IDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITG 256
Query: 251 CGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ G ++ L F M +G+ QPNEF S+ S C ++L G Q+ + K G
Sbjct: 257 FTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGR 316
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N+ S+ +Y K G + A++ F + +LV+WNA+IA LA D++
Sbjct: 317 NVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIAA------LANSDVN----- 365
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ F ++ G+ PD TF ++L C + L QG QIH+ +K G V +L
Sbjct: 366 -EAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSL 424
Query: 430 VNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
+ MY KC + A VF ++S L+SW ++++ + H +A +LF+ ML + +P+
Sbjct: 425 LTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPD 484
Query: 489 QVTFVGALAACS----------------NAGMV------------YEALGYFEMMQKEYK 520
+T L C+ +G+V Y G + + +
Sbjct: 485 NITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFD 544
Query: 521 I--KPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
P + + LI + + G +EA F ++ + +PNEV + ++ C G +E
Sbjct: 545 STQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEE 604
Query: 576 GF--YAAEQLLKLKPKDCESYAMLLDIFVSAG 605
G+ Y ++ P E + ++D+ AG
Sbjct: 605 GWHLYNTMEIELGIPPTREHVSCMVDLLARAG 636
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 21/339 (6%)
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
EA+ F K S ++P+ T ++ C + SL+ G ++H +K +L ++N
Sbjct: 62 EALDTFNFHLKNSSIQLEPS--TYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQN 119
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALS 374
I+ +Y KCG + +A+K FD M ++V+W MI+G++Q NG +A+
Sbjct: 120 HILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQ------------NGQENDAII 167
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
++ ++ SG PD TF SI+ C ++ G Q+H +K+G+ ++ AL++MY
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYT 227
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV-RPNQVTFV 493
K G+I AS VF +ST+ LISW SMITGF +AL LF DM GV +PN+ F
Sbjct: 228 KFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFG 287
Query: 494 GALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+AC + ++ G + M ++ + + L DM+ + G + A +++
Sbjct: 288 SVFSACRS--LLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE 345
Query: 553 FEPNEVIWSVFIAGCRRHG-NMELGFYAAEQLLKLKPKD 590
P+ V W+ IA N + F+ + L P D
Sbjct: 346 -SPDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMPDD 383
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/584 (33%), Positives = 327/584 (55%), Gaps = 18/584 (3%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL L C+ S+ +GK H + + DT N L +LY+ CG + A + F+ +
Sbjct: 58 TLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAM 117
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++++SW T+I N E V+ L+ FS+M EG Q EFTL+S C ++
Sbjct: 118 SVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECK 177
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+H++ IKL S+ V + + +Y KC ++ +A +F+ M VTW+++ AG Q
Sbjct: 178 QLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQ-- 235
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
NG E L +F GM+ +T SSIL+ C+ L + +G Q+HA+ +
Sbjct: 236 ----------NGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIV 285
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K GF ++ V T+LV++Y KCG+IE++ VF +M + ++ W +MI F+ H+ S +A+
Sbjct: 286 KHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMI 345
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LFE M G+ PN+VT++ L+ACS+ G+V E YF ++ + +P + HY C++D+
Sbjct: 346 LFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVL 405
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G +EA+ + KM FEP +W + R H N+ L AAEQL +L+P++ ++
Sbjct: 406 GRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGNHV 465
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L +++ ++G WE+V V + R+ + SWI K K++ F + HP +++
Sbjct: 466 LLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAGEREHPGITDVYN 525
Query: 656 VLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
L+E+ + + ++ +L D +E +HSEKLA AFGL++ P PI + K
Sbjct: 526 KLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLISLPPNIPITIYK 585
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+F+KI++ +T R++IVRD R H F +G C+C DF
Sbjct: 586 NLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDF 629
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 195/384 (50%), Gaps = 13/384 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LLQ C R+SL + H + G D L+N+Y KCG + A++VFD + +
Sbjct: 62 LLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDAMSVRS 121
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
++SW ++I+GY N + A+ +F M G T TL + L AC++ +I KQ+H
Sbjct: 122 IISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHT 181
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+K + + VG + +Y+ C + A F + EK ++W+++ +NG +
Sbjct: 182 IAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEE 241
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F EG+Q EFT++SI S C ++ + G QVH++ +K G+ NL V S++
Sbjct: 242 VLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVD 301
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG ++++ ++F M N+V WNAMIA S H EA+ +F K+
Sbjct: 302 VYAKCGQIEKSYEVFADMEEKNVVLWNAMIAS-----------FSRHAHSWEAMILFEKM 350
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGR 438
G+ P+ T+ SIL+ CS +E+G L L +V+ + +V++ + G+
Sbjct: 351 QQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGK 410
Query: 439 IERASRVFVEMSTRTLIS-WTSMI 461
+ A ++ +M S W S++
Sbjct: 411 TDEAWKLLDKMPFEPTASMWGSLL 434
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 154/296 (52%), Gaps = 13/296 (4%)
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
FTL + +C SL VG H L I G ++ N ++ LY KCG D A+++FD
Sbjct: 57 FTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFDA 116
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
MS ++++WN MIAG+ ++D+ EAL +FS+++ G + +T SS L
Sbjct: 117 MSVRSIISWNTMIAGYTH----NREDV-------EALKLFSRMHREGTQMTEFTLSSTLC 165
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C+ A+ + +Q+H + +K S VGTA +++Y KC I+ A VF M +T ++
Sbjct: 166 ACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVT 225
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W+S+ GF + L + L LF+ G++ + T L+ C++ ++ E ++
Sbjct: 226 WSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIV 285
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
K + + L+D++ + G IE++++ M+ E N V+W+ IA RH +
Sbjct: 286 K-HGFHRNLFVATSLVDVYAKCGQIEKSYEVFADME-EKNVVLWNAMIASFSRHAH 339
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 136/282 (48%), Gaps = 5/282 (1%)
Query: 61 EALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EAL + + EG ++ + S L C + ++ + +H +K FV T +
Sbjct: 140 EALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFL 199
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+VY KC +++A VF+N+P V+W+SL +G+VQN E + +F G T
Sbjct: 200 DVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEF 259
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ + L+ C+SL I G Q+HA +VK+ + V SL +Y+ CG + + + F +
Sbjct: 260 TVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADM 319
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EKNV+ W +I + + + + + F KM GI PNE T SI S C + G
Sbjct: 320 EEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGR 379
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYL-KCGLVDEAQKLFDGM 337
+L + A + S M L + G DEA KL D M
Sbjct: 380 HYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKM 421
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D++T +L +C++ +L G+ H L + G ++D V L+N+Y KCG+ + A RVF
Sbjct: 55 DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVF 114
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
MS R++ISW +MI G+ ++ +AL+LF M G + + T L AC+ +
Sbjct: 115 DAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAII 174
Query: 507 EALGYFEMMQKEYKIKPVMDHY----MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
E + IK +D +D++ + I++A + M E V WS
Sbjct: 175 ECKQLHTI-----AIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMP-EKTSVTWSS 228
Query: 563 FIAGCRRHGNME 574
AG ++G E
Sbjct: 229 LFAGFVQNGLHE 240
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 6/205 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG E V L FQ S EG ++ + S+L C + + +HA IVK G H+
Sbjct: 236 NGLHEEVLCL-FQ---STQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHR 291
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ FV T LV+VY KCG +E++ +VF ++ NVV W ++I+ + +++ A+ +F M
Sbjct: 292 NLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQ 351
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS-LCSLYSTCGSL 226
+ G +P VT + L+ACS + G+ ++ +T + + S + + G
Sbjct: 352 QVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKT 411
Query: 227 NSAIKAFNRIR-EKNVMSWTTVIGA 250
+ A K +++ E W +++G+
Sbjct: 412 DEAWKLLDKMPFEPTASMWGSLLGS 436
>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/566 (35%), Positives = 340/566 (60%), Gaps = 16/566 (2%)
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G HA +++ DT N L ++YS CG + SA K F+ + ++++SW T++G+ +
Sbjct: 39 GMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRSLVSWNTMVGSHTQ 98
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
NG+ + L F +M EG +EFT++S+ C + Q+H +K SN+ V
Sbjct: 99 NGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFV 158
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+++ +Y KCGLV +A +F+ M + VTW++M+AG+ Q ++L EAL
Sbjct: 159 GTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQ------NELY-----EEAL 207
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F + + G++ + +T SS L+ C+ AL +G+Q+ A++ KTG S++ V ++L++MY
Sbjct: 208 VLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMY 267
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE A VF + + ++ W ++++GF+ H S +A+ FE M G+ PN +T++
Sbjct: 268 AKCGIIEEAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYI 327
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L+ACS+ G+V + YF++M + + + P + HY C++D+ R G + EA DFI +M F
Sbjct: 328 SVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPF 387
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+ +W +A CR + N+EL AA+ L +++P + ++ +L +I+ + RWE+VA
Sbjct: 388 DATASMWGSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARA 447
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+NL +E K + SWI IK KV+SF + HP+ EI+ L++LV + K GYK +
Sbjct: 448 RNLLKESKAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKT 507
Query: 674 SFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
+L D E + +HSEKLA+ FG++ P +PI ++K+ +C DCH+F+K+ +S+
Sbjct: 508 EHDLHDVEESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSI 567
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
T REIIVRD+ R H F NG+C+C +F
Sbjct: 568 TEREIIVRDTNRFHHFKNGYCSCGEF 593
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 207/394 (52%), Gaps = 17/394 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEI----IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+++VS LQ + + + A I HA I++ G D L+N+Y KCG +E A+K
Sbjct: 17 ATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 76
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P ++VSW +++ + QN E A+ +F+ M + G + T+ + + AC++
Sbjct: 77 LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCC 136
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ KQ+H + +K + + VG +L +Y+ CG + A F + E++ ++W++++
Sbjct: 137 VFECKQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAG 196
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+N + L F + + G++ N+FT++S S C +L G QV ++ K G SN
Sbjct: 197 YVQNELYEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSN 256
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +S++ +Y KCG+++EA +F + N+V WNA+++G S H
Sbjct: 257 IFVISSLIDMYAKCGIIEEAYTVFSSVEEKNVVLWNAILSG-----------FSRHVRSL 305
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTAL 429
EA+ F K+ G+ P+ T+ S+L+ CS L +E+G + L ++ +S +V+ + +
Sbjct: 306 EAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNVLHYSCM 365
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
V++ + G + A M S W S++
Sbjct: 366 VDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 162/336 (48%), Gaps = 14/336 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG+ E L Q + EG + S++ C + + + +H +KT
Sbjct: 99 NGDCEKALVLFMQ----MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDS 154
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ FV T L++VY KCG +++A VF+ +P + V+W+S+++GYVQN E A+ +F
Sbjct: 155 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 214
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G T+ +AL+AC++ ++ GKQ+ A K + V +SL +Y+ CG +
Sbjct: 215 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 274
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F+ + EKNV+ W ++ + +++ + +F KM GI PN+ T S+ S C
Sbjct: 275 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 334
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL-KCGLVDEAQKLFDGMS-HVNLVTW 345
+ + G + L I++ S + S M L + GL+ EA+ D M W
Sbjct: 335 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMW 394
Query: 346 NAMIAG-----HAQMMDLAKD---DLSAHNGGTEAL 373
+++A + ++ ++A ++ HN G L
Sbjct: 395 GSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVL 430
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 10/177 (5%)
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L +R A +G HA ++ G +D + L+NMY KCG +E A ++F EM R+
Sbjct: 26 LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMPVRS 85
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L+SW +M+ + +AL LF M G ++ T + AC+ V+E
Sbjct: 86 LVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFEC----- 140
Query: 514 MMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ +K +D + L+D++ + G +++A + M E ++V WS +AG
Sbjct: 141 KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMP-ERSDVTWSSMVAG 196
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/694 (30%), Positives = 369/694 (53%), Gaps = 15/694 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L +G + ++ +++ C L H ++K G D + LV Y K G
Sbjct: 98 MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALT 183
+E+A++VFD +P ++V+W ++ GYV N LA+ F +M +A + V + AL
Sbjct: 158 VEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA 217
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC S GK+IH YV+++ E D VG SL +Y CG + A F + + V++
Sbjct: 218 ACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVT 277
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +IG N + F +M +EG+Q T ++ + C S G VH +
Sbjct: 278 WNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVV 337
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ + ++ + +++ +Y K G V+ ++K+F +++ LV+WN MIA + + K+
Sbjct: 338 RRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAY-----MYKEMY 392
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
TEA+++F +L + + PD +T S+++ L +L QIH+ + G+ +
Sbjct: 393 ------TEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENT 446
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
++ A+++MY + G + + +F +M ++ +ISW +MI G+A H AL++F++M
Sbjct: 447 LIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYN 506
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G++PN+ TFV L ACS +G+V E +F +M +EY + P ++HY C+ D+ R G + E
Sbjct: 507 GLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLRE 566
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
FI+ M +P +W + R ++++ YAAE++ +L+ + Y +L ++
Sbjct: 567 VLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYAD 626
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AGRWEDV V+ L +E+ L T+ S + + SF D H QS I +V D L K
Sbjct: 627 AGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSDILSRK 686
Query: 664 AKCFGYKQQESFEL---TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
K + +S+ + T + HS +LA+ FGL+++ I SPILV K+ +C CH+
Sbjct: 687 IKETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHH 746
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+I+ + R I+V DSK H+F +G C C D+
Sbjct: 747 ALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDY 780
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 209/460 (45%), Gaps = 32/460 (6%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G M+EA + + + +I G+ P A+ + MLE G P T +
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
C+ L + G+ H V+K E D NSL + Y+ G + A + F+ + ++++
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W ++ NG L F +M +Q + + + + C S G ++H
Sbjct: 175 TWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGY 234
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
I+ G +++V S++ +Y KCG V A+ +F M +VTWN MI G+A ++ D
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA--LNERPD 292
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
EA F ++ + G++ ++ T ++L C++ + G +H ++ FL
Sbjct: 293 ---------EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
VV+ TAL+ MY K G++E + ++F +++ +TL+SW +MI + + +A+ LF ++L
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL 403
Query: 482 LAGVRPNQVT---------FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
+ P+ T +G+L C LGY E +M+ ++
Sbjct: 404 NQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTL-------IMN---AVL 453
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M+ R G + + + KM + + W+ I G HG
Sbjct: 454 HMYARSGDVVASREIFDKM-VSKDVISWNTMIMGYAIHGQ 492
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 122/229 (53%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
F + + EG +V+ + ++LL C +S +H ++V+ + T L+
Sbjct: 294 AFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLE 353
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGK G +E ++K+F + +VSW ++I+ Y+ AI +FL++L YP T
Sbjct: 354 MYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFT 413
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ T + A L S+R +QIH+Y++ ++T + N++ +Y+ G + ++ + F+++
Sbjct: 414 MSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMV 473
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
K+V+SW T+I +G+ L F +M G+QPNE T S+ + C
Sbjct: 474 SKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTAC 522
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/705 (30%), Positives = 372/705 (52%), Gaps = 26/705 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S+ +L + SL++ + +HA I+++ ++ +++ +++ A VF+
Sbjct: 22 SHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNL 81
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P+ + ++ +PE + V+ M G + L A S ++S+ G
Sbjct: 82 IPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEG 141
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+IH K + D V L +Y+ CG + A F+++ ++V++W+ +I ++
Sbjct: 142 LEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQS 201
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G L F +M + ++P+E L+++ S CG +L G +H ++ + ++
Sbjct: 202 GLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ 261
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM----------MDLAKDDL- 363
++++ +Y CG +D A LF+ M+ NLV AM+ G++++ + K DL
Sbjct: 262 SALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLV 321
Query: 364 ---------SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ + EAL++F+++ S G+KPD T S++T C+ L AL+Q + IH
Sbjct: 322 CWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFV 381
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K GF + + AL+ MY KCG +ERA R+F +M + +ISWT MI+ FA H + AL
Sbjct: 382 DKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSAL 441
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+ F M + PN +TFVG L ACS+AG+V E F M E+ I P HY C++D+
Sbjct: 442 RFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDL 501
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
F R + EA + ++ M PN +IW +A CR HG +ELG +AA++LL+L P ++
Sbjct: 502 FGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAH 561
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
L +I+ A RWEDV V+ L + + +S+ S + ++++ F D H + EI+
Sbjct: 562 VFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIY 621
Query: 655 KVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVV 709
+ L E+V K K GY L D ++ ++HSEKLA+ +GL+ S I ++
Sbjct: 622 EKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRII 681
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH FIK+ + + REI+VRD R H + +G C+C+D+
Sbjct: 682 KNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDY 726
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 228/500 (45%), Gaps = 79/500 (15%)
Query: 44 LIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT 103
L +L+ + EP ++L E + T+G V S+ LL+ KSL IH K
Sbjct: 94 LRELSRSEEPEKTLLVYERMR--TQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKL 151
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF 163
G D FV T LV +Y CG + EA+ +FD + +VV+W+ +I GY Q+ A+ +F
Sbjct: 152 GFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLF 211
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
+M P + L T L+AC ++ GK IH ++++ D + ++L ++Y++C
Sbjct: 212 EEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASC 271
Query: 224 GSLNSAIK-------------------------------AFNRIREKNVMSWTTVIGACG 252
GS++ A+ FN++ +K+++ W+ +I
Sbjct: 272 GSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYA 331
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
E+ + L F++M S GI+P++ T+ S+ + C + +L +H K G+ L
Sbjct: 332 ESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALP 391
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ N+++ +Y KCG ++ A+++FD M N+++W MI+ A H A
Sbjct: 392 INNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM-----------HGDAGSA 440
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L F ++ ++P+ TF +L CS +E+G +I F S ++N
Sbjct: 441 LRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKI--------FYS-------MINE 485
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
+ T + + M+ F +L +AL+L E M LA PN + +
Sbjct: 486 HN---------------ITPKHVHYGCMVDLFGRANLLREALELVEAMPLA---PNVIIW 527
Query: 493 VGALAACSNAGMVYEALGYF 512
+AAC G + LG F
Sbjct: 528 GSLMAACRVHGEI--ELGEF 545
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 240/771 (31%), Positives = 398/771 (51%), Gaps = 57/771 (7%)
Query: 13 TLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLN-GNSEPVRSLGFQEALSVLTEGPK 71
T T +R+PS+ +++ T S + + +++ N + +R+ AL + P+
Sbjct: 23 TTTTANRKPST-----RNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPR 77
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHA-HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ S+ +++ C LSN + A + + +D +++ + N+ A+
Sbjct: 78 RSSISWNAMISGC-----LSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARL 132
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P +VVSW +++SGY QN + A +F +M + N L + ++
Sbjct: 133 LFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDA 192
Query: 191 IRLGKQIHAYVVKYQTEDDTSV--GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
RL ++++ D + N + Y L A F+R+ E++ +SW T+I
Sbjct: 193 RRL----------FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMI 242
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NGE ++ R F E + FT T++ S L +V G+
Sbjct: 243 SGYAQNGELLEAQRLFE----ESPVRDVFTWTAMVSGYVQNGMLDEARRVFD-GMP---E 294
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA--------- 359
N N+I+ Y++C +D+A++LF+ M N+ +WN MI G+AQ D+A
Sbjct: 295 KNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRM 354
Query: 360 --KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+D +S A +G G EAL +F ++ G + + TF+S L+ C+ + ALE G+
Sbjct: 355 PQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGK 414
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
Q+H +K G S VG AL+ MY KCG I+ A VF + + ++SW +MI G+A H
Sbjct: 415 QVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHG 474
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+AL LFE M G+ P+ VT VG L+ACS+ G+V + YF M ++Y I HY
Sbjct: 475 FGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHY 534
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C+ID+ R G +++A + +K M FEP+ W + R HGN ELG AA+ + +++P
Sbjct: 535 TCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 594
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ Y +L +++ ++GRW DV ++ R+ + + +SW+ +++K+++F D +HP
Sbjct: 595 DNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVHP 654
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIV 703
+ I+ L+EL K K GY L D EE V YHSEKLA+AFG+L P
Sbjct: 655 ERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFGILAIPAG 714
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+ +C DCHN +K I+ + R II+RDS R H F G C+C D+
Sbjct: 715 RPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDY 765
>gi|409032180|gb|AFV08644.1| EMP5 [Zea mays]
gi|409032182|gb|AFV08645.1| EMP5 [Zea mays]
gi|414878626|tpg|DAA55757.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 776
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/693 (30%), Positives = 375/693 (54%), Gaps = 33/693 (4%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V +Y + L C + + +HA +V G F+ + ++Y +CG M EA++V
Sbjct: 100 VDRFTYAAALAACSRALDVRTGKAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRV 159
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + VSW +L+SGYV+ E + VF M G + LG+ + C+S S
Sbjct: 160 FDAAEERDDVSWNALLSGYVRAGAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSY 219
Query: 192 ---------RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
R+ + +H VVK + D + +++ +Y+ G+L +A+ F + + NV+
Sbjct: 220 AAAGDVGGGRIAEAVHGCVVKAGLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVI 279
Query: 243 SWTTVI-GACGENGEAV--QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+I G C E V + L +S++ S G+QP+EF+ +SI C G Q+H
Sbjct: 280 VLNAMIAGFCREEAADVAREALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIH 339
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+K + ++ + ++++ LY G +++ + F + ++V W ++I+G Q
Sbjct: 340 GQVLKHSFQGDVYIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQ----- 394
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
++L EAL +F + G++PD++ SS++ C+ L GEQI L +K+GF
Sbjct: 395 -NELF-----EEALRLFQESVRCGLRPDVFAMSSVMNACASLAVARTGEQIQCLAVKSGF 448
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+G + ++M + G ++ A+R F EM +R ++SW+++I+ A+H + AL +F +
Sbjct: 449 NRFTAMGNSFIHMCARSGDVDAATRRFQEMESRDVVSWSAVISSHAHHGCARDALCVFNE 508
Query: 480 MLLAGVRP-NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
ML A V P N++TF+ L ACS+ G+V E L Y+ +M EY + P + H C++D+ R
Sbjct: 509 MLDAKVAPPNEITFLSILTACSHGGLVDEGLRYYGIMNDEYGLSPTIKHCTCVVDLLGRA 568
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G + +A FI+ F + V+W +A CR HG+ME G A++++ L+P SY +L
Sbjct: 569 GRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVADKIMDLEPTSSASYVILY 628
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
++++ AG + ++L +E + + SWI + V+SF D HP+S I++ +
Sbjct: 629 NMYLDAGELSSASKTRDLMKERGVKKEPGLSWIELSSGVHSFVAGDKSHPESKAIYRKVA 688
Query: 659 ELVEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
E+V K ++Q+ + HSEKLA+AFG+++ P +PI V+K+ +CRDC
Sbjct: 689 EMVSKVAGISSREQD---------LAGCHSEKLAVAFGMIHLPQSAPIRVMKNLRVCRDC 739
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
H+ +++I+ REII+RD+ R H+F +G C+C
Sbjct: 740 HSTMELISKSERREIILRDAIRFHRFRDGSCSC 772
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 145/513 (28%), Positives = 243/513 (47%), Gaps = 38/513 (7%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK--CGNMEEAQKVFDN 134
Y+ LL+ C +L + +HAH+ + + F+ L+ Y + G A ++ D
Sbjct: 5 YLHLLRSCA---ALPHVAAVHAHLARAHPNASLFLRNCLLASYCRLGVGAPLHAARLLDE 61
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+PR N VS+ +I Y + P L++ F T AL ACS +R G
Sbjct: 62 MPRRNAVSYNLVIVAYSRAGLPALSLATFARARAWARVVDRFTYAAALAACSRALDVRTG 121
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K +HA VV + + NS+ S+Y+ CG + A + F+ E++ +SW ++
Sbjct: 122 KAVHAMVVLGGLGNGLFLSNSVASMYARCGEMGEARRVFDAAEERDDVSWNALLSGYVRA 181
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC---------GTMLSLRVGAQVHSLGIKL 305
G + L FS M G+ N F L SI C G + R+ VH +K
Sbjct: 182 GAREETLEVFSLMCRHGLGWNSFALGSIIKCCASSSSYAAAGDVGGGRIAEAVHGCVVKA 241
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG--HAQMMDLAKDDL 363
G ++L + ++++ +Y K G + A LF + N++ NAMIAG + D+A+
Sbjct: 242 GLDADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVLNAMIAGFCREEAADVAR--- 298
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EAL ++S+L S GM+P ++FSSIL C+ G+QIH LK F DV
Sbjct: 299 -------EALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDV 351
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+G+AL+++Y G +E R F + + ++ WTS+I+G + L +AL+LF++ +
Sbjct: 352 YIGSALIDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRC 411
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLG 539
G+RP+ + AC++ + E +Q +K + + + I M R G
Sbjct: 412 GLRPDVFAMSSVMNACASLAVARTG----EQIQC-LAVKSGFNRFTAMGNSFIHMCARSG 466
Query: 540 CIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHG 571
++ A ++M E +V+ WS I+ HG
Sbjct: 467 DVDAATRRFQEM--ESRDVVSWSAVISSHAHHG 497
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 155/313 (49%), Gaps = 7/313 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + +E G + S+ S+L+ C + IH ++K D ++ + L
Sbjct: 298 REALGLYSELQSRGMQPSEFSFSSILRACNLAGEFGFGKQIHGQVLKHSFQGDVYIGSAL 357
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y G ME+ + F +LP+ +VV WTS+ISG VQN E A+ +F + + G P
Sbjct: 358 IDLYSGSGCMEDGYRCFRSLPKQDVVIWTSVISGCVQNELFEEALRLFQESVRCGLRPDV 417
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ + + AC+SL R G+QI VK T++GNS + + G +++A + F
Sbjct: 418 FAMSSVMNACASLAVARTGEQIQCLAVKSGFNRFTAMGNSFIHMCARSGDVDAATRRFQE 477
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTSISSVCGTMLSLRV 294
+ ++V+SW+ VI + +G A L F++ML + PNE T SI + C +
Sbjct: 478 MESRDVVSWSAVISSHAHHGCARDALCVFNEMLDAKVAPPNEITFLSILTACSHGGLVDE 537
Query: 295 GAQVHS-LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGH 352
G + + + + G + ++ ++ L + G + +A+ D H + V W +++A
Sbjct: 538 GLRYYGIMNDEYGLSPTIKHCTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASC 597
Query: 353 AQMMDLAKDDLSA 365
D+ + L A
Sbjct: 598 RIHGDMERGQLVA 610
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/602 (34%), Positives = 331/602 (54%), Gaps = 11/602 (1%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + S + C L IH + ++ + D V+ L+++Y KC +
Sbjct: 215 EGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSA 274
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+K+FD + N+VSWT++ISGY+QNS AI +F +M +AG P + L +C S
Sbjct: 275 ARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGS 334
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L +I G+QIHA+V+K E D V N+L +Y+ C L A F+ + E + +S+ +
Sbjct: 335 LAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAM 394
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +N + + + F +M ++P+ T S+ V + L++ + Q+H L IK G
Sbjct: 395 IEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGT 454
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ +L ++++ +Y KC LV++A+ +F+ + + ++V WN+MI GHAQ +
Sbjct: 455 SLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQ-----------NE 503
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EA+ +F++L SGM P+ +TF +++T+ S L ++ G+Q HA +K G +D V
Sbjct: 504 QGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSN 563
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG I+ +F +I W SMIT +A H + +ALQ+F M A V P
Sbjct: 564 ALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEP 623
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N VTFVG L+AC++AG V E L +F M+ Y I+P ++HY ++++F R G + A +F
Sbjct: 624 NYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEF 683
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I++M +P +W ++ C GN E+G YAAE L P D Y +L +I+ S G W
Sbjct: 684 IERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLW 743
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
DV ++ + SWI + +V++F HP++ I+ VLDEL K
Sbjct: 744 ADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNL 803
Query: 668 GY 669
GY
Sbjct: 804 GY 805
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 273/504 (54%), Gaps = 29/504 (5%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C K++S E +H VK + +V T L+N+Y K G M+EA VF LP
Sbjct: 125 SVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVR 184
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V+W ++I+GY Q +A+ +F M G P L +A++ACS+L + G+QIH
Sbjct: 185 TPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIH 244
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
Y + TE DTSV N L LY C L++A K F+ + +N++SWTT+I +N
Sbjct: 245 GYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNA 304
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F M G QP+ F TSI + CG++ ++ G Q+H+ IK ++ V+N+++
Sbjct: 305 EAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALI 364
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC + EA+ +FD ++ + +++NAMI G+++ DLA EA++IF +
Sbjct: 365 DMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLA-----------EAVNIFQR 413
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ ++P L TF S+L + S +A+E +QIH L +K+G D+ +AL+++Y KC
Sbjct: 414 MRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSL 473
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A VF + + ++ W SMI G A + +A++LF +LL+G+ PN+ TFV +
Sbjct: 474 VNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTV 533
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDH----YMCLIDMFVRLGCIEEAFDFIKKMDFE 554
S ++ + + IK +D+ LIDM+ + G I+E +M FE
Sbjct: 534 ASTLASMFHGQQF-----HAWIIKAGVDNDPHVSNALIDMYAKCGFIKEG-----RMLFE 583
Query: 555 P----NEVIWSVFIAGCRRHGNME 574
+ + W+ I +HG+ E
Sbjct: 584 STCGEDVICWNSMITTYAQHGHAE 607
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 263/532 (49%), Gaps = 32/532 (6%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECV-----NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
L+ L+ P S +L C+ + L+ A IHA G D F+ L+
Sbjct: 4 LNPLSRAPSTHIRSLARVLLSCLPTGGDRLRRLNPA--IHARATVAGRLDDLFLTNLLLR 61
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG-NYPTNV 176
Y G + +A+ +FD +P N+VSW S+IS Y Q+ + + AI +F+ +A P
Sbjct: 62 GYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEF 121
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
L + L AC+ +++ LG+Q+H VK + + VG +L +LY+ G ++ A+ F+ +
Sbjct: 122 LLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHAL 181
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+ ++W TVI + G L F +M EG++P+ F L S S C + L G
Sbjct: 182 PVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGR 241
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+H + ++ V N ++ LY KC + A+KLFD M + NLV+W MI+G+ Q
Sbjct: 242 QIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQ-- 299
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
++ EA+++F + +G +PD + +SIL C L A+ QG QIHA +K
Sbjct: 300 ---------NSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK 350
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+D V AL++MY KC + A VF ++ IS+ +MI G++ + +A+ +
Sbjct: 351 ADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNI 410
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDM 534
F+ M +RP+ +TFV L S+ + + ++ K +D Y LID+
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKS---GTSLDLYAASALIDV 467
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+ + + +A + ++ + VIW+ I G H E G E+ +KL
Sbjct: 468 YSKCSLVNDAKTVFNMLHYK-DMVIWNSMIFG---HAQNEQG----EEAIKL 511
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 3/205 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++V+L+ S+ + + HA I+K G D V L+++Y KCG
Sbjct: 515 LLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGF 574
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++E + +F++ +V+ W S+I+ Y Q+ E A+ VF M EA P VT L+A
Sbjct: 575 IKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSA 634
Query: 185 CSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C+ + G ++ Y E S+ +L+ G L++A + R+ K +
Sbjct: 635 CAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAA 694
Query: 244 -WTTVIGACGENGEAVQGLRFFSKM 267
W +++ AC G A G R+ ++M
Sbjct: 695 VWRSLLSACHLFGNAEIG-RYAAEM 718
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 326/578 (56%), Gaps = 17/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+TAC+ S+ + IHA++ Q + NSL LY CG++ A + F+ + +++
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SWT++I +N + L ML +PN FT S+ G S +G Q+H+L
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K + ++ V ++++ +Y +CG +D A +FD + N V+WNA+IAG A+ D
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD---- 246
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
G L +F+++ +G + +T+SS+ + + + ALEQG+ +HA +K+G
Sbjct: 247 -------GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL 299
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
VG +++MY K G + A +VF + + +++W SM+T FA + L +A+ FE+M
Sbjct: 300 SAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMR 359
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
GV NQ+TF+ L ACS+ G+V E YF+MM KEY ++P +DHY+ ++D+ R G +
Sbjct: 360 KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLL 418
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+A FI KM +P +W + CR H N ++G +AA+ + +L P D +L +I+
Sbjct: 419 NDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIY 478
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S G+W+ A V+ + + + + SW+ I++ V+ F ND HP+S EI+K +E+
Sbjct: 479 ASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEIS 538
Query: 662 EKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ + GY + L DE+ YHSEK+A+AF L+N P+ + I ++K+ +C
Sbjct: 539 IQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICG 598
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ + I+ + REI+VRD+ R H F +G C+C D+
Sbjct: 599 DCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 201/386 (52%), Gaps = 12/386 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+ C +SL +A IHAH+ + F+ L+++Y KCG + +A++VFD +P
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++ SWTSLI+GY QN P+ A+ + ML P T + L A + S +G+Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IHA VKY DD VG++L +Y+ CG ++ AI F+++ KN +SW +I G+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L F++M G + FT +S+ S + +L G VH+ IK G + V N+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
I+ +Y K G + +A+K+FD + ++VTWN+M+ AQ + G EA++ F
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ-----------YGLGREAVTHF 355
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G+ + TF SILT CS +++G+Q + + ++ +V++ +
Sbjct: 356 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRA 415
Query: 437 GRIERASRVFVEMSTR-TLISWTSMI 461
G + A +M + T W +++
Sbjct: 416 GLLNDALVFIFKMPMKPTAAVWGALL 441
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 170/398 (42%), Gaps = 52/398 (13%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P +LG + L K ++ SLL+ S E IHA VK H D
Sbjct: 143 NDMPDEALGLLPGM--LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDV 200
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V + L+++Y +CG M+ A VFD L N VSW +LI+G+ + E + +F +M
Sbjct: 201 YVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRN 260
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G T+ T + +A + + ++ GK +HA+++K VGN++ +Y+ GS+ A
Sbjct: 261 GFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDA 320
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
K F+R+ +K+V++W +++ A + G + + F +M G+ N+ T SI + C
Sbjct: 321 RKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS-- 378
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
GLV E ++ FD M NL I
Sbjct: 379 ---------------------------------HGGLVKEGKQYFDMMKEYNL---EPEI 402
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS--RLVALEQG 407
+ ++DL L +AL K+ MKP + ++L C + + Q
Sbjct: 403 DHYVTVVDL----LGRAGLLNDALVFIFKMP---MKPTAAVWGALLGSCRMHKNAKIGQF 455
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
H L D L N+Y G+ + A+RV
Sbjct: 456 AADHVFELDP---DDTGPPVLLYNIYASTGQWDAAARV 490
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P LY S++T C+R +L+ IHA + F V + +L+++Y KCG + A RV
Sbjct: 64 PRLY--HSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRV 121
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL--AACSNAG 503
F M R + SWTS+I G+A + + +AL L ML +PN TF L A S +
Sbjct: 122 FDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E + + +Y + L+DM+ R G ++ A +++ N V W+
Sbjct: 182 GIGEQI---HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNAL 237
Query: 564 IAGCRRHGNME 574
IAG R G+ E
Sbjct: 238 IAGFARKGDGE 248
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/566 (37%), Positives = 326/566 (57%), Gaps = 30/566 (5%)
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+ C+L+ + GSL A FN+I + ++I Q + F+ M+ +G+ P
Sbjct: 18 AFCALHDS-GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDP 76
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ FT S+ CG + G Q+H KLG+AS+ ++N++M +Y CG + A+K+F
Sbjct: 77 DRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVF 133
Query: 335 DGMSHVNLVTWNAMIAGHAQ------------MMDLAKDDLSAH---NGGTE------AL 373
D M + ++V+W MI +AQ M++A + + NG E AL
Sbjct: 134 DKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEAL 193
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
S+F+++ SG+K D T +S+L C+ L ALE G+ +H K DV +GTALV+MY
Sbjct: 194 SLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMY 253
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG IE A RVF EM + +++WT++I G A +AL+LF +M ++ V+P+ +TFV
Sbjct: 254 AKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFV 313
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G LAACS+AG+V E + YF M +Y I+P ++HY C++DM R G I EA D I+ M
Sbjct: 314 GVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPM 373
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
P+ + ++ CR HGN+ + AA+QL++L PK+ +Y +L +I+ S WE +
Sbjct: 374 APDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKM 433
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ L E + + S I + V+ F D HPQS+EI++ LD+++ + K GY +
Sbjct: 434 RELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDK 493
Query: 674 S---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
S F++ ++E + HSEKLAIAFGLL+T +PI VVK+ +C DCH+ +K I+ +
Sbjct: 494 SEVLFDMDEKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEV 553
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD R H F G C+CRDF
Sbjct: 554 YNREIIVRDRNRFHHFTKGSCSCRDF 579
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 162/360 (45%), Gaps = 47/360 (13%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G++ A+ VF+ +P + S+I GY + P AI + M+ G P T +
Sbjct: 26 GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+C L GKQ+H + K D + N+L ++YS CG L SA K F+++ K+V+
Sbjct: 86 KSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142
Query: 243 SWTTVIGACG--------------------------------ENGEAVQGLRFFSKMLSE 270
SW T+IGA E+ + + L F++M
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G++ ++ T+ S+ C + +L +G +H K ++ + +++ +Y KCG ++ A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
++F M +++TW A+I G L+ G +AL +F ++ S +KPD T
Sbjct: 263 MRVFQEMPEKDVMTWTALIVG-----------LAMCGQGLKALELFHEMQMSEVKPDAIT 311
Query: 391 FSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
F +L CS + +G +++ K G + +V+M + GRI A + M
Sbjct: 312 FVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 371
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 36/306 (11%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ +G ++ SL + C L + +H H K G D ++ L+N+Y CG
Sbjct: 69 MMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC 125
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM----------------LE 168
+ A+KVFD + +VVSW ++I Y Q P AI +F M +E
Sbjct: 126 LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVE 185
Query: 169 AGNYP----------------TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
+Y VT+ + L AC+ L ++ LGK +H Y+ K + E D ++
Sbjct: 186 DSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVAL 245
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
G +L +Y+ CGS+ SA++ F + EK+VM+WT +I G+ ++ L F +M +
Sbjct: 246 GTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 305
Query: 273 QPNEFTLTSISSVCGTMLSLRVG-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ T + + C + G A +S+ K G ++ ++ + + G + EA+
Sbjct: 306 KPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAE 365
Query: 332 KLFDGM 337
L M
Sbjct: 366 DLIQNM 371
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 45 IQLNGNSEPVRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
I +NG+ V ++EALS+ E G K + SLL C + +L + +H +I
Sbjct: 178 IMINGH---VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYI 234
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
K D + T LV++Y KCG++E A +VF +P +V++WT+LI G Q A+
Sbjct: 235 EKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKAL 294
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACS 186
+F +M + P +T L ACS
Sbjct: 295 ELFHEMQMSEVKPDAITFVGVLAACS 320
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/584 (34%), Positives = 328/584 (56%), Gaps = 29/584 (4%)
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIHA + ++ + + L Y++ G L+ ++ F R + +V WT +I G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
Q L F+++ML++G++PN FT +SI +C + G +HS +KLG+ S+L VR
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRT 163
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDLAK---DDLSAHNG-- 368
++ +Y + G V AQ+LFD M +LV+ AM+ +A+ +D A+ D + +G
Sbjct: 164 GLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVC 223
Query: 369 -------------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
EAL +F ++ + KP+ T S+L+ C +L ALE G +H+
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
G +V VGTALV+MY KCG +E A VF ++ + +++W SMI G+A H S +ALQ
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LF+ M G+ P +TF+G L+AC ++G V E F M+ EY I+P ++HY C++++
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLL 403
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G +E+A++ +K M+ EP+ V+W + CR HG + LG E L+ + +Y
Sbjct: 404 GRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYI 463
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L +I+ + G W+ VA ++ + ++ + + S I + +KV+ F HP+ EI+
Sbjct: 464 LLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYM 523
Query: 656 VLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
+L+E+ K GY Q L T++E + HSEKLAIAFGL+NT + I +VK
Sbjct: 524 MLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVK 583
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH K+I+ +T R+I+VRD R H FVNG C+C D+
Sbjct: 584 NLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDY 627
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 115/474 (24%), Positives = 201/474 (42%), Gaps = 62/474 (13%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
K++S+ IHA + + G + L Y G ++ + +F +V WT++I
Sbjct: 41 KTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAII 100
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
G+ E A++ + ML G P T + L C I GK +H+ VK +
Sbjct: 101 HGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFD 156
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS------------------------ 243
D V L +Y+ G + SA + F+ + EK+++S
Sbjct: 157 SDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGM 216
Query: 244 -------WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
W +I +NG + L F +ML +PNE T+ S+ S CG + +L G
Sbjct: 217 EERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGR 276
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
VHS G N+ V +++ +Y KCG +++A+ +FD + ++V WN+MI G+A
Sbjct: 277 WVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAM-- 334
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTL 415
H EAL +F + G+ P TF IL+ C + +G I + +
Sbjct: 335 ---------HGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKD 385
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH---SLSH 471
+ G + +VN+ + G +E+A + M+ + W +++ H +L
Sbjct: 386 EYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGE 445
Query: 472 QALQLFEDMLLAGVRPNQVTFV---GALAACSNAGMVYEALGYFEMMQKEYKIK 522
+ ++L D LA N T++ AA N ++ + M K+ +K
Sbjct: 446 KIVELLVDQNLA----NSGTYILLSNIYAAVGN----WDGVARLRTMMKDSGVK 491
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 151/319 (47%), Gaps = 37/319 (11%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+LT+G + ++ S+L+ C + + +H+ VK G D +V T L++VY + G+
Sbjct: 119 MLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGD 174
Query: 125 MEEAQKVFDNLPRINVVS-------------------------------WTSLISGYVQN 153
+ AQ++FD +P ++VS W +I GY QN
Sbjct: 175 VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQN 234
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
P A+ +F ML+A P VT+ + L+AC L ++ G+ +H+Y+ + + VG
Sbjct: 235 GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVG 294
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+L +YS CGSL A F++I +K+V++W ++I +G + + L+ F M G+
Sbjct: 295 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLH 354
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P T I S CG + G + + + + G + ++ L + G V++A +
Sbjct: 355 PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYE 414
Query: 333 LFDGMS-HVNLVTWNAMIA 350
L M+ + V W ++
Sbjct: 415 LVKNMNIEPDPVLWGTLLG 433
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 2/210 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L K + +S+L C +L + +H++I G + V T LV++Y KCG+
Sbjct: 247 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 306
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A+ VFD + +VV+W S+I GY + + A+ +F M G +PTN+T L+A
Sbjct: 307 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSA 366
Query: 185 CSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVM 242
C + G I + +Y E + +L G + A + + E + +
Sbjct: 367 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 426
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
W T++GAC +G+ G + ++ + +
Sbjct: 427 LWGTLLGACRLHGKIALGEKIVELLVDQNL 456
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 331/585 (56%), Gaps = 22/585 (3%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+T + C +++ + +H +V E T + N+L ++Y G L+ A F+
Sbjct: 17 ITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDE 76
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ ++NV+SWTT+I A + + L F ML EG++PN +T +S+ C +L+LR
Sbjct: 77 MPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR-- 134
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H +K+G S++ VR++++ Y K G +A +F+ M +LV WN++I G AQ
Sbjct: 135 -QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQN 193
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
D G E L ++ ++ + D T +S+L C+ L LE G Q+H L
Sbjct: 194 SD-----------GDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVL 242
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQAL 474
K + D+++ AL++MY KCG +E A+ +F M T + +ISW++MI G A + S AL
Sbjct: 243 K--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADAL 300
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+LFE M G +PN +T +G L ACS+AG+V + YF+ M++ + I P +HY C+ID+
Sbjct: 301 KLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDL 360
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++EA I +M+ EP+ V W + + CR H N++L YAA+++LKL P D +Y
Sbjct: 361 LGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTY 420
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ ++ +WEDVA V+ R + + SWI + +V++F D HP+ EI
Sbjct: 421 ILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIK 480
Query: 655 KVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPILVV 709
+ L +L+++ GY +F L D E + YHSEKLAI FGL++ P I +
Sbjct: 481 RELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIR 540
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH F K+++ L R I++RD R H F G C+C D+
Sbjct: 541 KNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDY 585
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 196/378 (51%), Gaps = 20/378 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y L++ C+ R ++ A ++H H+ G F++ L+N+Y K G ++EA+ +FD +
Sbjct: 18 TYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEM 77
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P NVVSWT++IS Y ++ A+ + ML G P T + L AC L ++R
Sbjct: 78 PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR--- 134
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H ++K E D V ++L YS G + A+ FN + +++ W ++IG +N
Sbjct: 135 QLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNS 194
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + L + +M ++ TLTS+ C + L +G QVH +K Y +L + N
Sbjct: 195 DGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNN 252
Query: 316 SIMYLYLKCGLVDEAQKLFDG-MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KCG +++A LF M+ ++++W+ MIAG LA++ SA +AL
Sbjct: 253 ALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG------LAQNGFSA-----DALK 301
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG--TALVNM 432
+F + S G KP+ T +L CS + G + ++K F D ++++
Sbjct: 302 LFEAMKSKGPKPNYITILGVLFACSHAGLVNDG-WYYFQSMKEHFGIDPGREHYGCIIDL 360
Query: 433 YKKCGRIERASRVFVEMS 450
+ G+++ A ++ EM+
Sbjct: 361 LGRAGKLDEAVKLIHEMN 378
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 145/290 (50%), Gaps = 8/290 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG + +Y S+L+ C L N +H I+K G D FV + L++ Y K G
Sbjct: 108 MLREGVRPNMYTYSSVLRAC---DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGE 164
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+A VF+ + ++V W S+I G+ QNS + +H++ M A TL + L A
Sbjct: 165 QHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRA 224
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR-IREKNVMS 243
C+ L + LG+Q+H +V+KY + D + N+L +Y CGSL A F R + EK+V+S
Sbjct: 225 CTGLALLELGRQVHVHVLKY--DQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVIS 282
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLG 302
W+T+I +NG + L+ F M S+G +PN T+ + C + G S+
Sbjct: 283 WSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMK 342
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAG 351
G I+ L + G +DEA KL M+H + VTW ++
Sbjct: 343 EHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGA 392
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 152/312 (48%), Gaps = 19/312 (6%)
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
++ M + + T + + C +++ VH GY + N+++ +
Sbjct: 1 MKAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINM 60
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y+K GL+DEA+ LFD M N+V+W MI+ + S N +AL +
Sbjct: 61 YVKFGLLDEARNLFDEMPDRNVVSWTTMISAY-----------SNSNLNHKALDFLILML 109
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G++P++YT+SS+L C L+ L Q+H LK G SDV V +AL++ Y K G
Sbjct: 110 REGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQH 166
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF EM T L+ W S+I GFA +S + L L++ M A +Q T L AC+
Sbjct: 167 DALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACT 226
Query: 501 NAGMVYEALGY-FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
G+ LG + +Y ++++ L+DM+ + G +E+A +M E + +
Sbjct: 227 --GLALLELGRQVHVHVLKYDQDLILNN--ALLDMYCKCGSLEDANLLFTRMMTEKDVIS 282
Query: 560 WSVFIAGCRRHG 571
WS IAG ++G
Sbjct: 283 WSTMIAGLAQNG 294
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/693 (32%), Positives = 355/693 (51%), Gaps = 31/693 (4%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ SL +HA ++K G D + L+++Y KCG + A +VFD +P N
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWT+L+ G++ + + + +F +M +G P TL L AC R G QIH
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 127
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V+ E V NSL +YS A + F+ I +N+ +W ++I G+
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 260 GLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY--ASNLRVRNS 316
L F +M QP+EFT S+ C + + R GAQVH+ G ASN + +
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y+KC + A ++FDG+ N + W +I GHAQ + EA+ +F
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQV-----------KEAMCLF 296
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+ SSG++ D + SS++ + + +EQG+Q+H T KT DV V +LV+MY KC
Sbjct: 297 RRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 356
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G A R F EM R ++SWT+MI G H +A+ LFE+M GV ++V ++ L
Sbjct: 357 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 416
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS++G+V E YF + ++ +++P +HY C++D+ R G + EA + I M EP
Sbjct: 417 SACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 476
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W ++ CR H ++ +G + LL + + +Y ML +I AG W + ++
Sbjct: 477 VGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGA 536
Query: 617 TREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAK-CFGYKQQES 674
R + L + SW + +V+ F D HPQ+ +I + L E+ + + GY
Sbjct: 537 MRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDAR 596
Query: 675 FEL--TDEES---ASVYHSEKLAIAFGLLNTPIVSP--------ILVVKSTTMCRDCHNF 721
L DEES + HSE+LA+ LL + V K+ +C DCH F
Sbjct: 597 CALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEF 656
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K ++++ R ++VRD+ R H+F NG C+CRD+
Sbjct: 657 LKGLSAVVRRVVVVRDANRFHRFQNGACSCRDY 689
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ +L +R +L G Q+HA +K GF SD ++ L++MY KCG++ A VF M
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
R ++SWT+++ GF +H + + L+LF +M +G PN+ T L AC
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGG 118
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/638 (34%), Positives = 341/638 (53%), Gaps = 18/638 (2%)
Query: 52 EPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH---QD 108
+P+ +L ++ T+ S+ ++ S S + HA K S +
Sbjct: 98 QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNN 157
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
FV T L+N+Y K G + +A++VFD +P N VSW +++SGY E A +F ML+
Sbjct: 158 VFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQ 217
Query: 169 AGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
N + TA L+A S + +G Q+H V+K SV NSL ++Y+ ++
Sbjct: 218 ECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMD 277
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+A+ F +E+N ++W+ +I +NGEA F +M S G P EFT I +
Sbjct: 278 AAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASS 337
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN-LVTWN 346
M +L VG Q H L +KLG+ + V+++++ +Y KCG +A+ F + V+ +V W
Sbjct: 338 DMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWT 397
Query: 347 AMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
AMI GH Q NG EAL ++S+++ G+ P T +S+L C+ L ALE
Sbjct: 398 AMITGHVQ------------NGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALE 445
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+HA LK GF VGTAL MY KCG +E + VF M R +ISW S+I+GF+
Sbjct: 446 PGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFS 505
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H AL LFE+M L G+ P+ +TF+ L ACS+ G+V YF M K+Y + P +
Sbjct: 506 QHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKL 565
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
DHY C++D+ R G ++EA DFI+ + + +W + + CR + ++G YA EQL++
Sbjct: 566 DHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLME 625
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L +D +Y +L +I+ + +W DV V++L R +S+ SW+ + ++V F +
Sbjct: 626 LGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWVELNNQVNVFVVGEQ 685
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESA 683
HP++ +I L L + K GY+Q F DE A
Sbjct: 686 QHPEAEKINVELIRLAKHMKDEGYRQTYKFLFDDELDA 723
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC--GLVDEAQKLFDGMSH--VNLVTWNAM 348
R G +H +K G AS+ V NS++ Y L+ A +F + ++ +WN++
Sbjct: 31 RAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSL 90
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQ 406
+ + LS H ALS F + SS + P ++F+++ T +R+ +
Sbjct: 91 L-----------NPLSRHQ-PLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASA 138
Query: 407 GEQIHALTLK---TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
G HA K + ++V V TAL+NMY K G I A RVF +M R +SW +M++G
Sbjct: 139 GAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSG 198
Query: 464 FANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A S +A +LF ML + N+ L+A S + + ++ K+ +
Sbjct: 199 YATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVG 258
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
V L+ M+ + C++ A E N + WS I G ++G +
Sbjct: 259 FVSVEN-SLVTMYAKAECMDAAMAVFGSSK-ERNSITWSAMITGYAQNGEAD 308
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/712 (31%), Positives = 361/712 (50%), Gaps = 31/712 (4%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
A+ +L P + LL+ SL +HA ++K G D + L+++Y
Sbjct: 187 RAIDLLGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYA 246
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG + A +VFD +P NVVSWT+L+ G++ + + + +F +M +G P TL
Sbjct: 247 KCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSA 306
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L AC R G QIH V+ E V NSL +YS A + F+ I +N
Sbjct: 307 TLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRN 364
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +W ++I G+ L F +M QP+EFT S+ C + + R GAQVH
Sbjct: 365 LATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVH 424
Query: 300 SLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+ G ASN + +++ +Y+KC + A ++FDG+ N + W +I GHAQ
Sbjct: 425 AAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQ 484
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
+ EA+ +F + SSG++ D + SS++ + + +EQG+Q+H T KT
Sbjct: 485 V-----------KEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKT 533
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
DV V +LV+MY KCG A R F EM R ++SWT+MI G H +A+ LF
Sbjct: 534 PAGLDVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLF 593
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
E+M GV ++V ++ L+ACS++G+V E YF + ++ +++P +HY C++D+ R
Sbjct: 594 EEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGR 653
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G + EA + I M EP +W ++ CR H ++ +G + LL + + +Y ML
Sbjct: 654 AGELREAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVML 713
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKV 656
+I AG W + ++ R + L + SW + +V+ F D HPQ+ +I +
Sbjct: 714 SNILAEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRA 773
Query: 657 LDELVEKAK-CFGYKQQESFEL--TDEES---ASVYHSEKLAIAFGLLNTPIVSP----- 705
L E+ + + GY L DEES + HSE+LA+ LL
Sbjct: 774 LREVEARMRERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGG 833
Query: 706 ---ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ V K+ +C DCH F+K ++++ R ++VRD+ R H+F NG C+CRD+
Sbjct: 834 GEVVRVYKNLRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDY 885
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/702 (30%), Positives = 373/702 (53%), Gaps = 30/702 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVYGKCGNME 126
EG K ++VS+L C + +++ + IH IV G D ++ +VN+YGKCG ++
Sbjct: 52 EGVKANAITFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVD 111
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++VF+ + N V+W ++I+ ++ + + A + +M G P +TL + + AC+
Sbjct: 112 LAREVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACA 171
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
++SI G+ +H V E D +V N+L +LY CG L +A A I ++ +SWTT
Sbjct: 172 WMQSISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTT 231
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ A +G + + +M EG++ + FT ++ C + +L +G ++H + G
Sbjct: 232 LLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESG 291
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT-WNAMIAGHAQMMDLAKDDLSA 365
+ ++ +++ +Y KCG D A++ FD M V VT WNA++A +
Sbjct: 292 IELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYV-----------L 340
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
+ G E L IF++++ G+ PD TF SIL C+ L AL G H+ L+ G V
Sbjct: 341 RDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAV 400
Query: 426 G------TALVNMYKKCGRIERASRVFVE---MSTRTLISWTSMITGFANHSLSHQALQL 476
T+++NMY KCG + A F + +++W++M+ ++ LS +AL+
Sbjct: 401 ASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRC 460
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F M GV+P+ V+FV A+A CS++G+V EA+ +F ++ ++ I P H+ CL+D+
Sbjct: 461 FYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLS 520
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G I EA +++ + W ++ CR +G++E A +L L+ +Y++
Sbjct: 521 RAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLERARRVAARLASLRSG--SAYSL 578
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS-FKPNDGLHPQSAEIFK 655
L +F + +W+DV + E SWI I ++VY F +D L P+ EIF
Sbjct: 579 LASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFA 638
Query: 656 VLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVK 710
L+ L + + GY++ ++ D YHSEK+A+ FGL++TP +P+ +VK
Sbjct: 639 ELERLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVK 698
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
+ +C+DCH IK I+ + R I +RD + H+F +G C+C+
Sbjct: 699 NIGVCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSCK 740
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 243/481 (50%), Gaps = 31/481 (6%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y +CG++ A++ FD + NVVSW+++I+ Y Q P A+ +F+ M G +T
Sbjct: 1 MYNRCGSVIHARRAFDAMVVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAIT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ L AC+SL +I LGK IH +V DD +GN++ ++Y CG ++ A + F R+
Sbjct: 61 FVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERM 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
KN ++W T+I AC + + +M +G++PN+ TL S+ C M S+ G
Sbjct: 121 EAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGR 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
VH + G S+ V N+++ LY KCG + A+ +G+ + ++W ++A +A+
Sbjct: 181 IVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYAR-- 238
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G A+++ +++ G+K D +TF ++L C + AL GE+IH +
Sbjct: 239 ---------HGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAE 289
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQ 475
+G D V+ TALV+MY KCG + A R F M R + W +++ + + L
Sbjct: 290 SGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLG 349
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----- 530
+F M L GV P+ VTF+ L AC++ ALG + + + D
Sbjct: 350 IFARMSLQGVAPDAVTFLSILDACAS----LAALGLGRLTHSRMLERGLFDRQAVASADL 405
Query: 531 ----LIDMFVRLGCIEEA-FDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELG---FYAAE 581
+I+M+ + G + +A +F K ++V+ WS +A + G E FY+ +
Sbjct: 406 LTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQ 465
Query: 582 Q 582
Q
Sbjct: 466 Q 466
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/693 (32%), Positives = 355/693 (51%), Gaps = 31/693 (4%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ SL +HA ++K G D + L+++Y KCG + A +VFD +P N
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VVSWT+L+ G++ + + + +F +M +G P TL L AC R G QIH
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHG 127
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V+ E V NSL +YS A + F+ I +N+ +W ++I G+
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 260 GLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY--ASNLRVRNS 316
L F +M QP+EFT S+ C + + R GAQVH+ G ASN + +
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGA 247
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y+KC + A ++FDG+ N + W +I GHAQ + EA+ +F
Sbjct: 248 LLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQV-----------KEAMCLF 296
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+ SSG++ D + SS++ + + +EQG+Q+H T KT DV V +LV+MY KC
Sbjct: 297 RRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKC 356
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G A R F EM R ++SWT+MI G H +A+ LFE+M GV ++V ++ L
Sbjct: 357 GLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALL 416
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS++G+V E YF + ++ +++P +HY C++D+ R G + EA + I M EP
Sbjct: 417 SACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPT 476
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W ++ CR H ++ +G + LL + + +Y ML +I AG W + ++
Sbjct: 477 VGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGA 536
Query: 617 TREEKLSETDDWSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAK-CFGYKQQES 674
R + L + SW + +V+ F D HPQ+ +I + L E+ + + GY
Sbjct: 537 MRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDAR 596
Query: 675 FEL--TDEES---ASVYHSEKLAIAFGLLNTPIVSP--------ILVVKSTTMCRDCHNF 721
L DEES + HSE+LA+ LL + V K+ +C DCH F
Sbjct: 597 CALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEF 656
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K ++++ R ++VRD+ R H+F NG C+CRD+
Sbjct: 657 LKGLSAVVRRVVVVRDANRFHRFQNGACSCRDY 689
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ +L +R +L G Q+HA +K GF SD ++ L++MY KCG++ A VF M
Sbjct: 7 IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMP 66
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
R ++SWT+++ GF +H + + L+LF +M +G PN+ T L AC
Sbjct: 67 ERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGG 118
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/710 (31%), Positives = 369/710 (51%), Gaps = 68/710 (9%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
T LV Y G + A FD +P R + V ++IS Y + S A+ VF +L +G
Sbjct: 92 TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151
Query: 171 NY-PTNVTLGTALTACSSLE--SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ P + + L+A L S+R Q+ V+K SV N+L +LY C +L
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211
Query: 228 S---AIKAFNRIREKNVMSWTTVI------GACG-------------------------E 253
+ A K + + +K+ ++WTT++ G G
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVH 271
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY----AS 309
+G V+ F +M+ E + +EFT TS+ S C G VH +L +
Sbjct: 272 SGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEA 331
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA-------- 359
L V N+++ LY KCG + A+++FD M ++V+WN +++G+ + +D A
Sbjct: 332 ALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMP 391
Query: 360 -KDDLS--------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
K++LS H G +E AL +F+++ + +KP YT++ ++ C L +L+ G+Q
Sbjct: 392 YKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQ 451
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H ++ GF G AL+ MY +CG ++ A+ +F+ M +SW +MI+ H
Sbjct: 452 LHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGH 511
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL+LF+ M+ G+ P++++F+ L AC+++G+V E YFE M++++ I P DHY
Sbjct: 512 GREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYT 571
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
LID+ R G I EA D IK M FEP IW ++GCR G+MELG +AA+QL K+ P+
Sbjct: 572 RLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQ 631
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+Y +L + + +AGRW D A V+ L R+ + + SWI +KV+ F D HP+
Sbjct: 632 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPE 691
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVS 704
+ +++K L+ + + + GY L D +E HSE+LA+ FGLL P +
Sbjct: 692 AHKVYKFLEMVGARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGA 751
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ V+K+ +C DCH + ++ REI+VRD +R H F +G C+C ++
Sbjct: 752 TVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNY 801
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 193/413 (46%), Gaps = 52/413 (12%)
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+D T +V Y + G++ A+ VF+ + V W ++ISGYV + A +F M
Sbjct: 226 KDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFRRM 285
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ----TEDDTSVGNSLCSLYST 222
+ T + L+AC++ GK +H + + Q E V N+L +LYS
Sbjct: 286 VLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSK 345
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGEN---------------------------- 254
CG++ A + F+ ++ K+V+SW T++ E+
Sbjct: 346 CGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGY 405
Query: 255 ---GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
G + L+ F++M +E ++P ++T S CG + SL+ G Q+H ++LG+ +
Sbjct: 406 VHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSN 465
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
N+++ +Y +CG V EA +F M +++ V+WNAMI+ L H G E
Sbjct: 466 SAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISA-----------LGQHGHGRE 514
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALV 430
AL +F ++ + G+ PD +F ++LT C+ +++G Q ++ G + T L+
Sbjct: 515 ALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLI 574
Query: 431 NMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHS----LSHQALQLFE 478
++ + GRI A + M S W ++++G +H A QLF+
Sbjct: 575 DLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y + C SL + + +H H+V+ G L+ +Y +CG ++EA +F +
Sbjct: 432 TYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVM 491
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
P I+ VSW ++IS Q+ A+ +F M+ G YP ++ T LTAC+
Sbjct: 492 PNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACN 542
>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
Length = 749
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/686 (32%), Positives = 363/686 (52%), Gaps = 55/686 (8%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+Q+C+ KS+++ I +H +K G H + L++ Y KCG++ A+KVFD +P
Sbjct: 81 YSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSVVYARKVFDEVP 138
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++V+W S+I+ Y++N + + AI ++ M+ G P T + A S L + G++
Sbjct: 139 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 198
Query: 197 IHAY-VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
H VV + VG++L +Y+ G + A +++ K+V+ +T +I +G
Sbjct: 199 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 258
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
E + L+ F M +GI+ NE+TL+S+ CG + L G +H L +K G S
Sbjct: 259 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLES------ 312
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALS 374
VTW ++I G Q NG E AL
Sbjct: 313 --------------------------AVTWTSVIVGLVQ------------NGREEIALL 334
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F ++ S + P+ +T SS+L CS L LEQG+QIHA+ +K G D VG AL++ Y
Sbjct: 335 KFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYG 394
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG E A VF + ++S SMI +A + H+ALQLF M G+ PN VT++G
Sbjct: 395 KCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLG 454
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+AC+NAG++ E F + I+ DHY C++D+ R G ++EA I +++
Sbjct: 455 VLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS 514
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ VIW ++ CR HG++E+ +++ L P+D ++ +L +++ S G W V +K
Sbjct: 515 -DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMK 573
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ RE +L + SW+ ++ ++++F D HP +I + L+EL+EK K GY
Sbjct: 574 SAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTR 633
Query: 675 FELTD-EESASV----YHSEKLAIAFGLLNTPIV-SPILVVKSTTMCRDCHNFIKIITSL 728
F L D +E + YHSEKLA+AF L + + I ++K+ +C DCH ++K ++ +
Sbjct: 634 FVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKI 693
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
R+II RD KR H F NG C+C D+
Sbjct: 694 VGRDIIARDVKRFHHFRNGLCSCGDY 719
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
N + L +SS++ C + ++ +I + LK GF +G L++ Y KCG +
Sbjct: 70 NGASFSESLQLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGNKLIDAYLKCGSV 127
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
A +VF E+ R +++W SMI + + S +A+ +++ M+ G+ P++ TF A
Sbjct: 128 VYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAF 187
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYM-------CLIDMFVRLGCIEEAFDFIKKMD 552
S+ G+V+E Q+ + V+ + L+DM+ + G + +A +
Sbjct: 188 SDLGLVHEG-------QRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQV 239
Query: 553 FEPNEVIWSVFIAGCRRHG 571
+ V+++ I G HG
Sbjct: 240 VGKDVVLFTALIVGYSHHG 258
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/578 (33%), Positives = 326/578 (56%), Gaps = 17/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+TAC+ S+ + IHA++ Q + NSL LY CG++ A + F+ + +++
Sbjct: 71 ITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDM 130
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SWT++I +N + L ML +PN FT S+ G S +G Q+H+L
Sbjct: 131 CSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHAL 190
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K + ++ V ++++ +Y +CG +D A +FD + N V+WNA+IAG A+ D
Sbjct: 191 TVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD---- 246
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
G L +F+++ +G + +T+SS+ + + + ALEQG+ +HA +K+G
Sbjct: 247 -------GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL 299
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
VG +++MY K G + A +VF + + +++W SM+T FA + L +A+ FE+M
Sbjct: 300 SAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMR 359
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
GV NQ+TF+ L ACS+ G+V E YF+MM KEY ++P +DHY+ ++D+ R G +
Sbjct: 360 KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVVDLLGRAGLL 418
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+A FI KM +P +W + CR H N ++G +AA+ + +L P D +L +I+
Sbjct: 419 NDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIY 478
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S G+W+ A V+ + + + + SW+ I++ V+ F ND HP+S EI+K +E+
Sbjct: 479 ASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEIS 538
Query: 662 EKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ + GY + L DE+ YHSEK+A+AF L+N P+ + I ++K+ +C
Sbjct: 539 IQIRKAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICG 598
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+ + I+ + REI+VRD+ R H F +G C+C D+
Sbjct: 599 DCHSAFRYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 201/386 (52%), Gaps = 12/386 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SL+ C +SL +A IHAH+ + F+ L+++Y KCG + +A++VFD +P
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++ SWTSLI+GY QN P+ A+ + ML P T + L A + S +G+Q
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQ 186
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IHA VKY DD VG++L +Y+ CG ++ AI F+++ KN +SW +I G+
Sbjct: 187 IHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGD 246
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L F++M G + FT +S+ S + +L G VH+ IK G + V N+
Sbjct: 247 GETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNT 306
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
I+ +Y K G + +A+K+FD + ++VTWN+M+ AQ + G EA++ F
Sbjct: 307 ILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQ-----------YGLGREAVTHF 355
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G+ + TF SILT CS +++G+Q + + ++ +V++ +
Sbjct: 356 EEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRA 415
Query: 437 GRIERASRVFVEMSTR-TLISWTSMI 461
G + A +M + T W +++
Sbjct: 416 GLLNDALVFIFKMPMKPTAAVWGALL 441
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 170/398 (42%), Gaps = 52/398 (13%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P +LG + L K ++ SLL+ S E IHA VK H D
Sbjct: 143 NDMPDEALGLLPGM--LRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDV 200
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V + L+++Y +CG M+ A VFD L N VSW +LI+G+ + E + +F +M
Sbjct: 201 YVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRN 260
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G T+ T + +A + + ++ GK +HA+++K VGN++ +Y+ GS+ A
Sbjct: 261 GFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDA 320
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
K F+R+ +K+V++W +++ A + G + + F +M G+ N+ T SI + C
Sbjct: 321 RKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACS-- 378
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
GLV E ++ FD M NL I
Sbjct: 379 ---------------------------------HGGLVKEGKQYFDMMKEYNL---EPEI 402
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS--RLVALEQG 407
+ ++DL L +AL K+ MKP + ++L C + + Q
Sbjct: 403 DHYVTVVDL----LGRAGLLNDALVFIFKMP---MKPTAAVWGALLGSCRMHKNAKIGQF 455
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
H L D L N+Y G+ + A+RV
Sbjct: 456 AADHVFELDP---DDTGPPVLLYNIYASTGQWDAAARV 490
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 8/191 (4%)
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P LY S++T C+R +L+ IHA + F V + +L+++Y KCG + A RV
Sbjct: 64 PRLY--HSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRV 121
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL--AACSNAG 503
F M R + SWTS+I G+A + + +AL L ML +PN TF L A S +
Sbjct: 122 FDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E + + +Y + L+DM+ R G ++ A +++ N V W+
Sbjct: 182 GIGEQI---HALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLE-SKNGVSWNAL 237
Query: 564 IAGCRRHGNME 574
IAG R G+ E
Sbjct: 238 IAGFARKGDGE 248
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/666 (33%), Positives = 351/666 (52%), Gaps = 73/666 (10%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++ Y K + EA+K FD +P NVVSWT+++ GYVQ A +F M E
Sbjct: 84 LISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSW 143
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V LG L ++ R + D ++ S Y G L A + F+
Sbjct: 144 TVMLG-GLIQVRRIDEAR-------GLFDIMPVKDVVARTNMISGYCQEGRLAEARELFD 195
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ +NV+SWTT+I +NG+ + F M + NE + T++
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKLFEVM----PEKNEVSWTAM------------ 239
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
+ Y + G ++EA +LFD M +V NAMI G Q
Sbjct: 240 -----------------------LMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQ 276
Query: 355 MMDLAK-----DDLSAHNGGT---------------EALSIFSKLNSSGMKPDLYTFSSI 394
++AK D + + GT EAL++F+ + G++ + + S+
Sbjct: 277 NGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISV 336
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L++C+ L +L+ G Q+HA +K+ F SDV V + L+ MY KCG + +A ++F S + +
Sbjct: 337 LSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDI 396
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+ W S+ITG+A H L +ALQ+F +M +G+ + VTFVG L+ACS G V E L FE
Sbjct: 397 VMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFES 456
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ +Y ++P +HY C++D+ R G + +A D I+KM E + +IW + CR H NM
Sbjct: 457 MKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMN 516
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L AA++LL+L+PK+ Y +L +I+ S GRW DVA ++ R +K+S++ SWI ++
Sbjct: 517 LAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVE 576
Query: 635 DKVYSFKPN-DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHS 688
+V+ F HP+ + I K+L++L + GY SF L D +E V +HS
Sbjct: 577 KRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHS 636
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
E+LA+AFGLL P PI V+K+ +C DCH+ IK+I +T REII+RD+ R H F +G
Sbjct: 637 ERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGF 696
Query: 749 CTCRDF 754
C+CRD+
Sbjct: 697 CSCRDY 702
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 187/364 (51%), Gaps = 23/364 (6%)
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+D T +++ Y + G + EA+++FD +PR NV+SWT++ISGYVQN Q ++A +F M
Sbjct: 169 KDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM 228
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
E L T +E + A VK N++ + G +
Sbjct: 229 PEKNEVSWTAML-MGYTQGGRIEEA--SELFDAMPVKA-----VVACNAMILGFGQNGEV 280
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A + F++IREK+ +W+ +I G V+ L F+ M EG+Q N +L S+ SVC
Sbjct: 281 AKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVC 340
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
++ SL G QVH+ +K + S++ V + ++ +Y+KCG + +A+++FD S ++V WN
Sbjct: 341 ASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWN 400
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
++I G+AQ H EAL +F ++ SSGM D TF +L+ CS +++
Sbjct: 401 SIITGYAQ-----------HGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKE 449
Query: 407 GEQIHALTLKTGFLSDVVVG--TALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITG 463
G +I ++K+ +L + +V++ + G + A + +M I W +++
Sbjct: 450 GLEIFE-SMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508
Query: 464 FANH 467
H
Sbjct: 509 CRTH 512
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/459 (22%), Positives = 208/459 (45%), Gaps = 74/459 (16%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y + G +E A++VFD +P +VSW S+++GY QN++P A ++F M
Sbjct: 26 YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM------------ 73
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
E +T N L S Y ++ A KAF+ + E
Sbjct: 74 ---------------------------PERNTVSWNGLISGYVKNRMVSEARKAFDTMPE 106
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+NV+SWT ++ + G + F +M E + S + + G ++ +R +
Sbjct: 107 RNVVSWTAMVRGYVQEGLVSEAETLFWQM-------PEKNVVSWTVMLGGLIQVRRIDEA 159
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
L + ++ R +++ Y + G + EA++LFD M N+++W MI+G+ Q
Sbjct: 160 RGL-FDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQ---- 214
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKT 417
NG + + KL + + +++++L ++ +E+ ++ A+ +K
Sbjct: 215 --------NG---QVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA 263
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
VV A++ + + G + +A +VF ++ + +W++MI + +AL LF
Sbjct: 264 -----VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLF 318
Query: 478 EDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
M GV+ N + + L+ C++ A + + + E+++ ++ + LI M+V
Sbjct: 319 ALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVAS--VLITMYV 376
Query: 537 RLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNME 574
+ G + +A + F P +++ W+ I G +HG +E
Sbjct: 377 KCGDLVKARQIFDR--FSPKDIVMWNSIITGYAQHGLVE 413
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 7/201 (3%)
Query: 58 GFQ-EALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF+ EAL++ EG + S +S+L C + SL + +HA +VK+ D FV
Sbjct: 309 GFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVA 368
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+ L+ +Y KCG++ +A+++FD ++V W S+I+GY Q+ E A+ VF +M +G
Sbjct: 369 SVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMA 428
Query: 173 PTNVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
VT L+ACS ++ G +I + KY E T + L G +N A+
Sbjct: 429 TDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMD 488
Query: 232 AFNRIR-EKNVMSWTTVIGAC 251
++ E + + W ++GAC
Sbjct: 489 LIQKMPVEADAIIWGALLGAC 509
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 152/363 (41%), Gaps = 78/363 (21%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
NS + Y+ G + SA + F+ + +K ++SW +++ +N + F KM
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKM------ 73
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P T++ N ++ Y+K +V EA+K
Sbjct: 74 PERNTVSW---------------------------------NGLISGYVKNRMVSEARKA 100
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M N+V+W AM+ G+ Q +EA ++F ++ P+ S
Sbjct: 101 FDTMPERNVVSWTAMVRGYVQ-----------EGLVSEAETLFWQM------PEKNVVSW 143
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+ + L+ + + ++ L + DVV T +++ Y + GR+ A +F EM R
Sbjct: 144 TVMLGG-LIQVRRIDEARGL-FDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMPRRN 201
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+ISWT+MI+G+ + A +LFE M N+V++ L + G + EA F+
Sbjct: 202 VISWTTMISGYVQNGQVDVARKLFEVM----PEKNEVSWTAMLMGYTQGGRIEEASELFD 257
Query: 514 MMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCR 568
M PV C +I F + G + +A FD I+ E ++ WS I
Sbjct: 258 AM-------PVKAVVACNAMILGFGQNGEVAKARQVFDQIR----EKDDGTWSAMIKVYE 306
Query: 569 RHG 571
R G
Sbjct: 307 RKG 309
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 152/347 (43%), Gaps = 49/347 (14%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS + Y + G ++ A+++FD M +V+WN+M+AG+ Q +N EA
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQ-----------NNRPREARY 68
Query: 375 IFSKLNSSGMKPDLYTFSSILT--ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+F K+ + +++ +++ + +R+V+ + T +VV TA+V
Sbjct: 69 LFDKMPER----NTVSWNGLISGYVKNRMVSEARK------AFDTMPERNVVSWTAMVRG 118
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y + G + A +F +M + ++SWT M+ G +A LF+ M + V V
Sbjct: 119 YVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDV----VAR 174
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
++ G + EA F+ M + I + +I +V+ G ++ A + M
Sbjct: 175 TNMISGYCQEGRLAEARELFDEMPRRNVIS-----WTTMISGYVQNGQVDVARKLFEVMP 229
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC--ESYAMLLDIFVSAGRWEDV 610
E NEV W+ + G + G +E A +L P AM+L G ++
Sbjct: 230 -EKNEVSWTAMLMGYTQGGRIE----EASELFDAMPVKAVVACNAMIL------GFGQNG 278
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
V K +++ E DD +W + KVY K G ++ +F ++
Sbjct: 279 EVAKARQVFDQIREKDDGTWSAMI-KVYERK---GFEVEALNLFALM 321
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/585 (35%), Positives = 322/585 (55%), Gaps = 25/585 (4%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+HA+++K + + + + S+ + S + A F + V W T + + E
Sbjct: 32 KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ F ++ I P+ +T + + C +L +R G VH KLG SN+ ++
Sbjct: 92 DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD-----DLSAHN-- 367
N I++LY CG + A+K+FD M +++TWN MIA +M D ++ N
Sbjct: 152 NMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR 211
Query: 368 ------GG-------TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
GG EA+ +F ++ +G+ P+ T ++L C+ + L G +IH +
Sbjct: 212 SWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFS 271
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
++G+ ++ V L++MY KCG +E A R+F M RT++SW++MI G A H + AL
Sbjct: 272 NRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDAL 331
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF M+ GV+PN VTF+G L ACS+ GMV + YF M ++Y I P ++HY C++D+
Sbjct: 332 ALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDL 391
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
F R G ++EA +FI M PN V+W + GC+ H N++L A L KL P + Y
Sbjct: 392 FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYY 451
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ AGRWEDVA V+ L R+ + +T WS I ++ VY+F D HPQ+ EIF
Sbjct: 452 VVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIF 511
Query: 655 KVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVV 709
+ ++L+++ K GY S L D +E HSEKLA+ FGL+ T + I ++
Sbjct: 512 QTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIM 571
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH +KII+ ++ REI+VRD R H F NG C+C D+
Sbjct: 572 KNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDY 616
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 198/405 (48%), Gaps = 44/405 (10%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HAH++KT S ++ + +V + A+ +F L V W + + + +
Sbjct: 34 LHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDS 93
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P AI +F + E P + T L ACS L +R GK +H YV K + + + N
Sbjct: 94 PADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNM 153
Query: 216 LCSLYSTCGSLNSAIKAFNR-------------------------------IREKNVMSW 244
+ LY+ CG + A K F++ + E+NV SW
Sbjct: 154 IVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSW 213
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T++IG + G++ + + F +M G+ PNE T+ ++ C M +L +G ++H +
Sbjct: 214 TSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNR 273
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
GY N+RV N+++ +Y+KCG +++A ++FD M +V+W+AMIAG L+
Sbjct: 274 SGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAG-----------LA 322
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLKTGFLSDV 423
AH +AL++F+K+ ++G+KP+ TF IL CS + +E+G + A +T G + +
Sbjct: 323 AHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRI 382
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANH 467
+V+++ + G ++ A + M + W +++ G H
Sbjct: 383 EHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVH 427
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 35/315 (11%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T S+V L+ C + N +I+H ++ K G + F+ +V++Y CG + A+
Sbjct: 111 PDHYTCSFV--LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVAR 168
Query: 130 KVFDNLPRINVV-------------------------------SWTSLISGYVQNSQPEL 158
KVFD +P+ +V+ SWTS+I GY Q + +
Sbjct: 169 KVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKE 228
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
AI +FL+M +AG P VT+ L AC+ + ++ LG++IH + + E + V N+L
Sbjct: 229 AIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLID 288
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y CG L A + F+ + E+ V+SW+ +I +G A L F+KM++ G++PN T
Sbjct: 289 MYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVT 348
Query: 279 LTSISSVCGTMLSLRVGAQVH-SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
I C M + G + S+ G + ++ L+ + GL+ EA + M
Sbjct: 349 FIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNM 408
Query: 338 SHV-NLVTWNAMIAG 351
N V W A++ G
Sbjct: 409 PIAPNGVVWGALLGG 423
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 2/176 (1%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V++L C + +L IH ++G ++ V L+++Y KCG +E+A ++FDN+
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
VVSW+++I+G + + E A+ +F M+ G P VT L ACS + + G++
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368
Query: 198 HAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIK-AFNRIREKNVMSWTTVIGAC 251
A + + Y + L+S G L A + N N + W ++G C
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGC 424
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 234/704 (33%), Positives = 378/704 (53%), Gaps = 56/704 (7%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
S+ IHA ++KTG H + ++ L+ V A VFD + N++ W ++
Sbjct: 2 SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
G+ +S P A+ ++L M+ G P + T L +C+ + + G+QIH +V+K +
Sbjct: 62 RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD 121
Query: 208 DDTSVGNSLCSLYSTCGSL-------------------------------NSAIKAFNRI 236
D V SL S+Y+ G L SA K F+ I
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSK-MLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
K+V+SW +I E G + L F + M+ ++P+E T+ ++ S C S+ +G
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
VHS G+ASNL++ N+++ LY K G V+ A +LFDG+ + ++++WN +I G+ M
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
N EAL +F ++ SG P+ T SIL C+ L A++ G IH
Sbjct: 302 -----------NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIN 350
Query: 416 K--TGFLSDV-VVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWTSMITGFANHSLSH 471
K G +++V + T+L++MY KCG I+ A +VF MS R+L +W +MI+GFA H ++
Sbjct: 351 KKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRAN 410
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
A +F M + G+ P+ +TFVG L+ACS++GM+ F M + Y+I P ++HY C+
Sbjct: 411 AAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCM 470
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
ID+ G +EA + I M EP+ VIW + C+ HGN+ELG A++L+K++P +
Sbjct: 471 IDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNS 530
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKL-SETDDWSWIRIKDKVYSFKPNDGLHPQS 650
SY +L +I+ +AGRW +VA ++ L ++ + + S I I V+ F D LHPQ+
Sbjct: 531 GSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQN 590
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
EI+ +L+E+ + G+ S L + E A +HSEKLAIAFGL++T +
Sbjct: 591 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLISTKPGTK 650
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+ ++K+ +C++CH K+I+ + REII RD R F +G C
Sbjct: 651 LTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 204/397 (51%), Gaps = 49/397 (12%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S+PV +L L +++ G + ++ LL+ C K + IH H++K G D
Sbjct: 67 SSDPVSALKLY--LVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDI 124
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM--- 166
+V T L+++Y + G +E+A+KVFD +VVS+T+LI+GYV E A +F ++
Sbjct: 125 YVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK 184
Query: 167 ------------LEAGNY-----------------PTNVTLGTALTACSSLESIRLGKQI 197
+E GNY P T+ T ++AC+ +SI LG+ +
Sbjct: 185 DVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHV 244
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H+++ + + + N+L LYS G + +A + F+ + K+V+SW T+IG
Sbjct: 245 HSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLY 304
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH-SLGIKL-GYASNL-RVR 314
+ L F +ML G PN+ T+ SI C + ++ +G +H + KL G +N+ ++
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364
Query: 315 NSIMYLYLKCGLVDEAQKLFD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
S++ +Y KCG +D AQ++FD MS+ +L TWNAMI+G A H A
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAM-----------HGRANAAF 413
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
IFS++ +G++PD TF +L+ CS L+ G I
Sbjct: 414 DIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNI 450
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 148/295 (50%), Gaps = 12/295 (4%)
Query: 54 VRSLGFQEALSVLTE-----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
V + ++EAL + E + S+ V+++ C S+ +H+ I G +
Sbjct: 197 VETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASN 256
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
++ L+++Y K G +E A ++FD L +V+SW +LI GY + + A+ +F +ML
Sbjct: 257 LKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 316
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYV---VKYQTEDDTSVGNSLCSLYSTCGS 225
+G P +VT+ + L AC+ L +I +G+ IH Y+ +K + +S+ SL +Y+ CG
Sbjct: 317 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGD 376
Query: 226 LNSAIKAFN-RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+++A + F+ + +++ +W +I +G A FS+M GI+P++ T + S
Sbjct: 377 IDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLS 436
Query: 285 VCGTMLSLRVGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
C L +G + + GY L ++ L GL EA+++ + M
Sbjct: 437 ACSHSGMLDLGRNIFR-SMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTM 490
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/667 (32%), Positives = 347/667 (52%), Gaps = 22/667 (3%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+IH + G + + + +V +Y K +E+A+KVFD +P + + W ++ISGY +N
Sbjct: 140 VIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199
Query: 155 QPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+I VF D++ E+ TL L A + L+ +RLG QIH+ K V
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL 259
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
SLYS CG + A F R +++++ +I NGE L F +++ G +
Sbjct: 260 TGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAK 319
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
TL S+ V G ++ + +H +K + S+ V ++ +Y K ++ A+KL
Sbjct: 320 LKSSTLVSLVPVSGHLMLIYA---IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKL 376
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFS 392
FD +L +WNAMI+G+ Q NG TE A+S+F ++ +S P+ T +
Sbjct: 377 FDESPEKSLPSWNAMISGYTQ------------NGLTEDAISLFREMQNSEFSPNPVTIT 424
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
IL+ C++L AL G+ +H L T F S + V TAL+ MY KCG I A R+F M +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKK 484
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++W +MI+G+ H +AL +F +ML +G+ P VTF+ L ACS+AG+V E F
Sbjct: 485 NEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIF 544
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M Y +P + HY C++D+ R G ++ A FI+ M +P +W + CR H +
Sbjct: 545 NSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKD 604
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
L +E+L +L P + + +L +I + + A V+ ++ KL++ ++ I
Sbjct: 605 TNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYH 687
I + + F D HPQ I + L++L K + GY+ + L D E H
Sbjct: 665 IGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVH 724
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LAIAFGL+ T + I ++K+ +C DCH K+I+ +T R I+VRD+ R H F +G
Sbjct: 725 SERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLISKITERVIVVRDANRFHHFKDG 784
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 785 VCSCGDY 791
>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g13880-like [Cucumis sativus]
Length = 839
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 238/734 (32%), Positives = 394/734 (53%), Gaps = 27/734 (3%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
K++ V+Y S +Q++ N + V L F +A + G K+ + L C +L
Sbjct: 122 KSNIVTYNSLISGYVQMS-NLDKVMIL-FDKARRL---GLKLDKYTCAGALTACSQSGNL 176
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
S ++IH I+ G + L+++Y KCG ++ A+ +FD+ +++ VSW SLI+GY
Sbjct: 177 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS-LESIRL-GKQIHAYVVKYQTED 208
VQN + E + + M + G TLG+AL ACSS ++ G +H + +K
Sbjct: 237 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL 296
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA-----CGENGEAVQGLRF 263
D VG +L +Y+ GSL+ AI+ F+++ +KNV+ + ++ E+ A + L
Sbjct: 297 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 356
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F +M S GI+P+ FT +S+ C + + QVH+L K G S+ + + ++ LY
Sbjct: 357 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 416
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSS 382
G + +A F+ + ++ +V AMI G+ Q NG E ALS+F +L +
Sbjct: 417 LGSMMDALLCFNSIHNLTIVPMTAMIXGYLQ------------NGEFESALSLFYELLTY 464
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
KPD + S+I++ C+ + L GEQI K G + + + MY K G + A
Sbjct: 465 EEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAA 524
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+ F +M ++SW++MI A H + +AL+ FE M G+ PN F+G L ACS+
Sbjct: 525 NLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHR 584
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G+V E L YF+ M+K+YK+K + H +C++D+ R G + +A I ++ FE V+W
Sbjct: 585 GLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRA 644
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
++ CR H + A+++++L+P SY +L +I++ AG + V+ L E ++
Sbjct: 645 LLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRI 704
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF-GYKQQESFELTDEE 681
+ SWI+I DKVYSF D H S +I+ LDE++ K K +++ E
Sbjct: 705 KKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEH 764
Query: 682 SASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
+V YHSEKLA+AFG+L +P+ V+K+ +C DCH +K+ + + RE+IVRDS R
Sbjct: 765 LTNVNYHSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVR 824
Query: 741 LHKFVNGHCTCRDF 754
H F +G C+C D+
Sbjct: 825 FHHFKDGSCSCGDY 838
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 262/507 (51%), Gaps = 18/507 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+++ YV L+Q L++ +++H+H++KT F+ L+N+Y KCG+ A K+
Sbjct: 57 LESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKL 116
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + N+V++ SLISGYVQ S + + +F G T ALTACS ++
Sbjct: 117 FDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNL 176
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK IH ++ Y + NSL +YS CG ++ A F+ + + +SW ++I
Sbjct: 177 SAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGY 236
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS--LRVGAQVHSLGIKLGYAS 309
+NG+ + L KM G+ N +TL S C + + G +H IKLG
Sbjct: 237 VQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHL 296
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V +++ +Y K G +D+A ++FD M N+V +NAM+AG Q + +D A+
Sbjct: 297 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETI--EDKCAY--- 351
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+AL++F ++ S G+KP ++T+SS+L C + + +Q+HAL K G LSD +G+ L
Sbjct: 352 -KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSIL 410
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y G + A F + T++ T+MI G+ + AL LF ++L +P++
Sbjct: 411 IDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDE 470
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAF 545
+++C+N GM+ E +Q + K + + I M+ + G + A
Sbjct: 471 FIXSTIMSSCANMGMLRSG----EQIQG-HATKVGISRFTIFQNSQIWMYAKSGDLYAAN 525
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGN 572
++M+ P+ V WS I +HG+
Sbjct: 526 LTFQQME-NPDIVSWSTMICSNAQHGH 551
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/582 (34%), Positives = 328/582 (56%), Gaps = 15/582 (2%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T ++AC L SIR K++ Y+V E D V N + ++ CG + A K F+ +
Sbjct: 119 TYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEM 178
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EK++ SW T+IG ++G + F M E T T++ + ++VG
Sbjct: 179 PEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGR 238
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+HS +K G + V +++ +Y KCG +++A +FD M V WN++IA +A
Sbjct: 239 QIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYA--- 295
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H EALS + ++ SG K D +T S ++ IC+RL +LE +Q HA ++
Sbjct: 296 --------LHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVR 347
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G+ +D+V TALV+ Y K GR+E A VF M + +ISW ++I G+ NH +A+++
Sbjct: 348 RGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEM 407
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
FE ML G+ PN VTF+ L+ACS +G+ F M +++K+KP HY C++++
Sbjct: 408 FEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKVKPRAMHYACMVELLG 467
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G ++EA++ I+ F+P +W+ + CR H N+ELG AAE L ++P+ +Y +
Sbjct: 468 REGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAENLYGMEPEKLCNYIV 527
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
LL+++ S+G+ ++ A V + + L +WI +K + Y+F D H Q+ EI++
Sbjct: 528 LLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFLCGDKSHSQTKEIYEK 587
Query: 657 LDELVEKAKCFGYKQQESFEL--TDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKST 712
++ ++ + GY ++ L DEE + YHSEKLAIAFGL+NTP +P+ + +
Sbjct: 588 VNNMMVEISRHGYVEENKALLPDVDEEEQRILKYHSEKLAIAFGLINTPHWTPLQITQGH 647
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ IK I +T REI+VRD+ R H F +G C+C D+
Sbjct: 648 RVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDY 689
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 237/461 (51%), Gaps = 16/461 (3%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
E L + +G V S+Y +L+ CV +S+ + + ++V +G D +VM ++ V+
Sbjct: 104 EILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHV 163
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG M +A+K+FD +P ++ SW ++I G+V + A +FL M E N + T T
Sbjct: 164 KCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTT 223
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
+ A + L +++G+QIH+ +K DDT V +L +YS CGS+ A F+++ EK
Sbjct: 224 MIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKT 283
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+ W ++I + +G + + L F+ +M G + + FT++ + +C + SL Q H+
Sbjct: 284 TVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHA 343
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
++ GY +++ +++ Y K G +++A +F+ M N+++WNA+IAG+
Sbjct: 344 ALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGN------ 397
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGF 419
H G EA+ +F ++ GM P+ TF ++L+ CS E+G +I ++++
Sbjct: 398 -----HGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 452
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFE 478
+ +V + + G ++ A + + T W +++T H E
Sbjct: 453 KPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAE 512
Query: 479 DMLLAGVRPNQV-TFVGALAACSNAGMVYEALGYFEMMQKE 518
+ L G+ P ++ ++ L +++G + EA G + ++++
Sbjct: 513 N--LYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRK 551
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/601 (34%), Positives = 329/601 (54%), Gaps = 21/601 (3%)
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
A+HV M G + ++T + C + ++R GK++H ++ T + N L +
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILIN 328
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y L A F+++ E+NV+SWTT+I A + +R + M +G+ PN FT
Sbjct: 329 MYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFT 388
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+S+ C + L+ Q+HS +K+G S++ VR++++ +Y K G + EA K+F M
Sbjct: 389 FSSVLRACERLYDLK---QLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMM 445
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
+ V WN++IA AQ H+ G EAL ++ + G D T +S+L C
Sbjct: 446 TGDSVVWNSIIAAFAQ-----------HSDGDEALHLYKSMRRVGFPADQSTLTSVLRAC 494
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ L LE G Q H LK F D+++ AL++MY KCG +E A +F M+ + +ISW+
Sbjct: 495 TSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWS 552
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
+MI G A + S +AL LFE M + G +PN +T +G L ACS+AG+V E YF M
Sbjct: 553 TMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNL 612
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
Y I P +HY C++D+ R +++ I +M+ EP+ V W + CR N++L Y
Sbjct: 613 YGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQNVDLATY 672
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AA+++LKL P+D +Y +L +I+ + RW DVA V+ ++ + + SWI + +++
Sbjct: 673 AAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIEVNKQIH 732
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAI 693
+F D HPQ EI + L++ + + GY +F L D E + YHSEKLAI
Sbjct: 733 AFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAI 792
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
FG+++ P I + K+ +C DCH F K+I L R I++RD R H F +G C+C D
Sbjct: 793 VFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGD 852
Query: 754 F 754
+
Sbjct: 853 Y 853
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 176/345 (51%), Gaps = 18/345 (5%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ G + +Y L++ C+ ++ + +H HI G H F+ L+N+Y K
Sbjct: 275 SMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFN 334
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+EEAQ +FD +P NVVSWT++IS Y + A+ + M G P T + L
Sbjct: 335 LLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLR 394
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC L + KQ+H++++K E D V ++L +YS G L A+K F + + +
Sbjct: 395 ACERLYDL---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVV 451
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W ++I A ++ + + L + M G ++ TLTS+ C ++ L +G Q H +
Sbjct: 452 WNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVL 511
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K + +L + N+++ +Y KCG +++A+ +F+ M+ ++++W+ MIAG AQ
Sbjct: 512 K--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLAQ--------- 560
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
NG EAL++F + G KP+ T +L CS + +G
Sbjct: 561 ---NGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG 602
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 129/237 (54%), Gaps = 10/237 (4%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N +R L F + +G ++ S+L+ C + L + + +H+ I+K G D
Sbjct: 367 NDRAMRLLAF-----MFRDGVMPNMFTFSSVLRAC---ERLYDLKQLHSWIMKVGLESDV 418
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV + L++VY K G + EA KVF + + V W S+I+ + Q+S + A+H++ M
Sbjct: 419 FVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRV 478
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G TL + L AC+SL + LG+Q H +V+K+ + D + N+L +Y CGSL A
Sbjct: 479 GFPADQSTLTSVLRACTSLSLLELGRQAHVHVLKF--DQDLILNNALLDMYCKCGSLEDA 536
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
FNR+ +K+V+SW+T+I +NG +++ L F M +G +PN T+ + C
Sbjct: 537 KFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFAC 593
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/624 (35%), Positives = 341/624 (54%), Gaps = 37/624 (5%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVS+TSL+ GYV++ AI +F M E + V LG L A E+ RL ++
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM- 169
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ D ++ S Y G + A F+ + ++NV+SWT +I +NGE
Sbjct: 170 -------PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVN 222
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV--GAQVHSLGIKLGYASNLRVRNS 316
+ F M + NE + T++ + G + + V A++ + + A+ N+
Sbjct: 223 LARKLFEVM----PERNEVSWTAM--LVGYIQAGHVEDAAELFNAMPEHPVAAC----NA 272
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+M + + G+VD A+ +F+ M + TW+AMI + Q L EALS F
Sbjct: 273 MMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFL-----------MEALSTF 321
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++P+ + SILT+C+ L L+ G ++HA L+ F DV +AL+ MY KC
Sbjct: 322 REMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKC 381
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G +++A RVF + ++ W SMITG+A H L QAL +F DM LAG+ P+ +T++GAL
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGAL 441
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS G V E F M I+P +HY C++D+ R G +EEAFD IK M EP+
Sbjct: 442 TACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPD 501
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
VIW + CR H N E+ +AA++LL+L+P + Y +L I+ S GRWED + ++
Sbjct: 502 AVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKF 561
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQSAEIFKVLDELVEKAKCFGYKQQESF 675
L+++ SWI +V+ F D L HP+ A I ++L++L GY SF
Sbjct: 562 ISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSF 621
Query: 676 EL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L DEE S YHSE+ A+A+GLL P PI V+K+ +C DCH+ IK+I +T+
Sbjct: 622 VLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITS 681
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REII+RD+ R H F +G C+CRD+
Sbjct: 682 REIILRDANRFHHFKDGFCSCRDY 705
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 193/390 (49%), Gaps = 24/390 (6%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
VR +A+ + + P+ SY LL ++ ++ A + +D T
Sbjct: 123 VRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEAR----RLFDEMPDRDVVAWT 178
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G + EA+ +FD +P+ NVVSWT++ISGY QN + LA +F M E
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS 238
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
L + A ++ A + E + N++ + G +++A F
Sbjct: 239 WTAMLVGYIQAGHVEDA--------AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
++ E++ +W+ +I A +N ++ L F +ML G++PN ++ SI +VC + L
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G +VH+ ++ + ++ ++++ +Y+KCG +D+A+++F ++V WN+MI G+A
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HA 412
Q H G +AL IF + +GM PD T+ LT CS +++G +I ++
Sbjct: 411 Q-----------HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
+T+ + + +V++ + G +E A
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEA 489
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
EALS E G + S +S+L C L +HA +++ D F ++
Sbjct: 314 LMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSA 373
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCGN+++A++VF ++V W S+I+GY Q+ E A+ +F DM AG P
Sbjct: 374 LITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPD 433
Query: 175 NVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T ALTACS ++ G++I ++ V + + L G + A
Sbjct: 434 GITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLI 493
Query: 234 -NRIREKNVMSWTTVIGAC 251
N E + + W ++GAC
Sbjct: 494 KNMPVEPDAVIWGALMGAC 512
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 119/238 (50%), Gaps = 8/238 (3%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG---NYPTN 175
+G+ G ++ A+ VF+ + + +W+++I Y QN A+ F +ML G NYP+
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+++ LT C++L + G+++HA +++ + D ++L ++Y CG+L+ A + F+
Sbjct: 337 ISI---LTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT 393
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
K+++ W ++I ++G Q L F M G+ P+ T + C ++ G
Sbjct: 394 FEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEG 453
Query: 296 AQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
++ +S+ + + ++ L + GLV+EA L M + V W A++
Sbjct: 454 REIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/717 (30%), Positives = 372/717 (51%), Gaps = 67/717 (9%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L K + +Y LLQ C R S +HAH V +G D +V L+N+Y CG++
Sbjct: 97 LASHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSV 156
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
A++VF+ P +++VSW +L++GYVQ + E A VF M
Sbjct: 157 GSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM------------------- 197
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMS 243
E +T NS+ +L+ G + A + FN R RE++++S
Sbjct: 198 --------------------PERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVS 237
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W+ ++ +N + L F +M G+ +E + S S C +L++ +G VH L +
Sbjct: 238 WSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAV 297
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGH--------AQ 354
K+G + ++N++++LY CG + +A+++F DG ++L++WN+MI+G+ A+
Sbjct: 298 KVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAE 357
Query: 355 MM--DLAKDDL----------SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
M+ + + D+ + H +EAL++F ++ G++PD S ++ C+ L
Sbjct: 358 MLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLA 417
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
L+ G+ IHA + +V++ T L++MY KCG +E A VF M + + +W ++I
Sbjct: 418 TLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVIL 477
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G A + Q+L +F DM G PN++TF+G L AC + G+V + YF M E+KI+
Sbjct: 478 GLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIE 537
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
+ HY C++D+ R G ++EA + I M P+ W + CR+H + E+G +
Sbjct: 538 ANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRK 597
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
L++L+P + +L +I+ S G W +V ++ + + + +T S I V+ F
Sbjct: 598 LIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLA 657
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGY---KQQESFELTDE--ESASVYHSEKLAIAFGL 697
D HPQ +I +LD + K K GY + S ++ +E E+A HSEKLA+AFGL
Sbjct: 658 GDKTHPQINDIEHMLDVVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGL 717
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +PI V K+ +C DCH +K+I+ R+I+VRD R H F +G C+C DF
Sbjct: 718 ITISPPTPIRVTKNLRICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDF 774
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 138/543 (25%), Positives = 249/543 (45%), Gaps = 97/543 (17%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM---EEA 128
++ S+ SLLQ C K + + + + + TG D + + L+N + +
Sbjct: 1 MKVSTLDSLLQSC---KCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYS 57
Query: 129 QKVFDNLPRINVVSWTSLISG--YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++F++L N +W +++ Y+QNS + +H L L + P + T L C+
Sbjct: 58 LRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKL-FLASHAKPDSYTYPILLQCCA 116
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ S G+Q+HA+ V + D V N+L +LY+ CGS+ SA + F +++SW T
Sbjct: 117 ARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNT 176
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
++ + GE + R F M P T+ S
Sbjct: 177 LLAGYVQAGEVEEAERVFEGM------PERNTIAS------------------------- 205
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMIAGHAQMMDLAKDDLS 364
NS++ L+ + G V++A+++F+G+ ++V+W+AM++ + Q
Sbjct: 206 --------NSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQ---------- 247
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+ G EAL +F ++ SG+ D S L+ CSR++ +E G +H L +K G V
Sbjct: 248 -NEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVS 306
Query: 425 VGTALVNMYKKCGRIERASRVFVE--------------------------------MSTR 452
+ AL+++Y CG I A R+F + M +
Sbjct: 307 LKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEK 366
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-Y 511
++SW++MI+G+A H +AL LF++M L GVRP++ V A++AC++ + LG +
Sbjct: 367 DVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATL--DLGKW 424
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
K++ + LIDM+++ GC+E A + M+ E W+ I G +G
Sbjct: 425 IHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAME-EKGVSTWNAVILGLAMNG 483
Query: 572 NME 574
++E
Sbjct: 484 SVE 486
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/694 (30%), Positives = 370/694 (53%), Gaps = 15/694 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L +G + ++ +++ C L H ++K G D + LV Y K G
Sbjct: 98 MLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGL 157
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALT 183
+E+A++VFD +P ++V+W +++ GYV N LA+ F +M +A + V + AL
Sbjct: 158 VEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALA 217
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC S GK+IH YV+++ E D VG SL +Y CG + A F + + V++
Sbjct: 218 ACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVT 277
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +IG N + F +M +EG+Q T ++ + C S G VH +
Sbjct: 278 WNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVV 337
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ + ++ + +++ +Y K G V+ ++K+F +++ LV+WN MIA + + K+
Sbjct: 338 RRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAY-----MYKEMY 392
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
TEA+++F +L + + PD +T S+++ L +L QIH+ + G+ +
Sbjct: 393 ------TEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENT 446
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
++ A+++MY + G + + +F +M ++ +ISW +MI G+A H AL++F++M
Sbjct: 447 LIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYN 506
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G++PN+ TFV L ACS +G+V E +F +M +EY + P ++HY C+ D+ R G + E
Sbjct: 507 GLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLRE 566
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
FI+ M +P +W + R ++++ YAAE++ +L+ + Y +L ++
Sbjct: 567 VLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYAD 626
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AGRWEDV V+ L +E+ L T+ S + + SF D H QS I +V + L K
Sbjct: 627 AGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQSRTIHEVSNILSRK 686
Query: 664 AKCFGYKQQESFEL---TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
+ + +S+ + T + HS +LA+ FGL+++ I SPILV K+ +C CH+
Sbjct: 687 IEETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLISSEIGSPILVKKNVRICNHCHH 746
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+I+ + R I+V DSK H+F +G C C D+
Sbjct: 747 ALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDY 780
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 211/460 (45%), Gaps = 32/460 (6%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G M+EA + + + +I G+ P A+ + MLE G P T +
Sbjct: 55 GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVV 114
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
C+ L + G+ H V+K E D NSL + Y+ G + A + F+ + ++++
Sbjct: 115 KCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIV 174
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+W T++ NG L F +M +Q + + + + C +S G ++H
Sbjct: 175 TWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGY 234
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
I+ G +++V S++ +Y KCG V A+ +F M +VTWN MI G+A ++ D
Sbjct: 235 VIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA--LNERPD 292
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
EA F ++ + G++ ++ T ++L C++ + G +H ++ FL
Sbjct: 293 ---------EAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLP 343
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
VV+ TAL+ MY K G++E + ++F +++ +TL+SW +MI + + +A+ LF ++L
Sbjct: 344 HVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELL 403
Query: 482 LAGVRPNQVT---------FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
+ P+ T +G+L C LGY E +M+ ++
Sbjct: 404 NQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTL-------IMN---AVL 453
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M+ R G + + + KM + + W+ I G HG
Sbjct: 454 HMYARSGDVVASREIFDKM-VSKDVISWNTMIMGYAIHGQ 492
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 33/311 (10%)
Query: 7 AAAAACTLETKSRQP------------------SSSLATLKDKNHTVSYQRSGSKLIQLN 48
AA AAC LE S Q +SL + K V+Y RS + L
Sbjct: 214 AALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR 273
Query: 49 G-------------NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI 95
N P + F + + EG +V+ + ++LL C +S
Sbjct: 274 TVVTWNCMIGGYALNERPDEA--FDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRS 331
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H ++V+ + T L+ +YGK G +E ++K+F + +VSW ++I+ Y+
Sbjct: 332 VHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEM 391
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
AI +FL++L YP T+ T + A L S+R +QIH+Y++ ++T + N+
Sbjct: 392 YTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNA 451
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +Y+ G + ++ + F+++ K+V+SW T+I +G+ L F +M G+QPN
Sbjct: 452 VLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPN 511
Query: 276 EFTLTSISSVC 286
E T S+ + C
Sbjct: 512 ESTFVSVLTAC 522
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/718 (30%), Positives = 384/718 (53%), Gaps = 35/718 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G ++VS+L C SL+ IH + +G + LV +Y + G++ +
Sbjct: 104 QGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGD 160
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++F +L + SW ++I + Q+ A+ +F +M + P + T ++ S+
Sbjct: 161 AKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFST 219
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
E + G++IHA +V + D V +L ++Y CGS + A + F+++++++++SW +
Sbjct: 220 PEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVM 279
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG NG+ + L + K+ EG + + T SI C ++ +L G VHS ++ G
Sbjct: 280 IGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGL 339
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA------------QM 355
S + V +++ +Y KCG ++EA+K+F+ M + + V W+ +I +A ++
Sbjct: 340 DSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKV 399
Query: 356 MDL--AKDDLS--------AHNG-GTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVA 403
D ++D +S NG A+ IF ++ ++G+KPD TF ++L C+ L
Sbjct: 400 FDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGR 459
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L + + +HA ++ S+VVV L+NMY +CG +E A R+F +T++SWT+M+
Sbjct: 460 LSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAA 519
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
F+ + +AL LF++M L GV+P+ VT+ L C++ G + + YF M + + + P
Sbjct: 520 FSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAP 579
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
DH+ ++D+ R G + +A + ++ M FEP+ V W F+ CR HG +ELG AAE++
Sbjct: 580 TADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERV 639
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
+L P Y + +I+ + G WE VA V+ E L + S+I + K++ F
Sbjct: 640 YELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSG 699
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
HP++ EI + L L + GY L D +E+ +YHSEK+AIAFGL+
Sbjct: 700 GKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLV 759
Query: 699 NTPIVS-PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF-VNGHCTCRDF 754
++ PI VVK+ +C DCH K I + R+IIVRD R H+F +G C+C D+
Sbjct: 760 SSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDY 817
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 221/441 (50%), Gaps = 31/441 (7%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P NVT T L +CSS + G+ +H + + E DT VGN+L S+Y C SL A
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 233 FNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F + R++NV+SW +I A +NG + + L + +M +G+ + T S+ C
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--- 121
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
SL G ++H+ G S + N+++ +Y + G V +A+++F + + +WNA+I
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
H+Q D + AL IF ++ +KP+ T+ ++++ S L +G +I
Sbjct: 182 AHSQSGDWSG-----------ALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKI 229
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA + GF +D+VV TAL+NMY KCG A VF +M R ++SW MI + +
Sbjct: 230 HAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDF 289
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK---EYKIKPVMDH 527
H+AL+L++ + + G + + TFV L ACS+ +AL ++ E + +
Sbjct: 290 HEALELYQKLDMEGFKRTKATFVSILGACSSV----KALAQGRLVHSHILERGLDSEVAV 345
Query: 528 YMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
L++M+ + G +EEA F+ +K D V WS I +G + A +
Sbjct: 346 ATALVNMYAKCGSLEEARKVFNAMKNRD----AVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 585 KLKPKDCESYAMLLDIFVSAG 605
+L +D S+ ++ +V G
Sbjct: 402 RLGSRDTISWNAMITTYVQNG 422
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 146/289 (50%), Gaps = 46/289 (15%)
Query: 59 FQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL + EG K +++VS+L C + K+L+ ++H+HI++ G + V T
Sbjct: 289 FHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATA 348
Query: 115 LVNVYGKCGNMEE----------------------------------AQKVFDNLPRINV 140
LVN+Y KCG++EE A+KVFD L +
Sbjct: 349 LVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDT 408
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+SW ++I+ YVQN A+ +F +M AG P VT L AC+SL + K +HA
Sbjct: 409 ISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHA 468
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+ + + E + V N+L ++Y+ CGSL A + F +EK V+SWT ++ A + G +
Sbjct: 469 QISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAE 528
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-------AQVHSL 301
L F +M EG++P++ T TSI VC SL G A++H+L
Sbjct: 529 ALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHAL 577
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 158/338 (46%), Gaps = 65/338 (19%)
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
R+ + +++ TV+ +C G+ V+G + L E I+ + F ++
Sbjct: 3 RQPDNVTFLTVLCSCSSCGDVVEG-----RALHERIRCSRFERDTM-------------- 43
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS--HVNLVTWNAMIAGHAQ 354
V N+++ +Y KC + +A+ +F+ M N+V+WNAMIA +AQ
Sbjct: 44 ----------------VGNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQ 87
Query: 355 MMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG TEAL ++ ++N G+ D TF S+L CS +L QG +IH
Sbjct: 88 ------------NGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNR 132
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+G S + ALV MY + G + A R+F + TR SW ++I + A
Sbjct: 133 VFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGA 192
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLI 532
L++F++M V+PN T++ ++ S ++ E + E++ + V+ LI
Sbjct: 193 LRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVV--ATALI 249
Query: 533 DMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGC 567
+M+ + G EA FD +KK D V W+V I GC
Sbjct: 250 NMYGKCGSSHEAREVFDKMKKRDM----VSWNVMI-GC 282
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
+PD TF ++L CS + +G +H + F D +VG AL++MY KC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 445 VFVEMS--TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
VF M R ++SW +MI +A + S +AL L+ M L G+ + VTFV L ACS+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 503 G--------MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
+ Y L F+ + L+ M+ R G + +A + +
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN------------ALVTMYARFGSVGDAKRMFQSLQTR 171
Query: 555 PNEVIWSVFIAGCRRHGN 572
+E W+ I + G+
Sbjct: 172 -DETSWNAVILAHSQSGD 188
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/725 (31%), Positives = 387/725 (53%), Gaps = 34/725 (4%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSN--AEIIHAHIVKTG---SHQDFFVMTFL 115
+AL + +V + + VS+L C + + HA +K G ++ F L
Sbjct: 139 DALRDMLADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNAL 198
Query: 116 VNVYGKCGNMEEAQKVF--DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++Y + G +++AQ++F ++V+W ++IS VQ + E A+ V DM+ G P
Sbjct: 199 LSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRP 258
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS----VGNSLCSLYSTCGSLNSA 229
VT +AL ACS LE + +G+++HA+V+K +DD + V ++L +Y++ ++ A
Sbjct: 259 DGVTFASALPACSRLELLGVGREVHAFVLK---DDDLAANSFVASALVDMYASNEQVSHA 315
Query: 230 IKAFNRIRE--KNVMSWTTVI-GACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSV 285
+ F+ + E + + W +I G G + + FS+M +E G P+E T+ +
Sbjct: 316 RRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPA 375
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C VH +K ASN V+N++M +Y + G +DEA +F + ++V+W
Sbjct: 376 CARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSW 435
Query: 346 NAMIAG---------HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
N +I G Q++ + SA +G T + ++ P+ T ++L
Sbjct: 436 NTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLP 495
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C+ L A +G++IH ++ SD+ VG+ALV+MY KCG + A VF + R +I+
Sbjct: 496 GCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVIT 555
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
W +I + H L +AL LF+ M+ G PN+VTF+ ALAACS++G+V L F+ M
Sbjct: 556 WNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGM 615
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNME 574
+++Y +P + C++D+ R G ++EA+ I M ++V WS + CR H N++
Sbjct: 616 KRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVK 675
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG AAE+L +L+P + Y +L +I+ +AG WE+ V+ + R+ +++ SWI +
Sbjct: 676 LGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELD 735
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSE 689
++ F + HP+SA++ +D L E+ + GY S L D + A YHSE
Sbjct: 736 GAIHRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSE 795
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
KLAIAFGLL P + I V K+ +C DCH K I+ + REI++RD +R H F +G C
Sbjct: 796 KLAIAFGLLRAPPGATIRVAKNLRVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTC 855
Query: 750 TCRDF 754
+C D+
Sbjct: 856 SCGDY 860
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 206/416 (49%), Gaps = 44/416 (10%)
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQT--EDDTSVGNSLCSLYSTCGSLNSAIKA 232
+ L A+ + ++L R + IH ++ +V N+L + Y+ CG L++A+
Sbjct: 48 HFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALAL 107
Query: 233 FNRIRE--KNVMSWTTVIGAC---GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
F ++ +S+ ++I A G A+ LR ML++ + + FTL S+ C
Sbjct: 108 FAATPPDLRDAVSYNSLISALCLFRRWGHALDALR---DMLADH-EVSSFTLVSVLLACS 163
Query: 288 TMLSL--RVGAQVHSLGIKLGYASNLRVR---NSIMYLYLKCGLVDEAQKLF--DGMSHV 340
+ R+G + H+ +K G+ R R N+++ +Y + GLVD+AQ+LF G
Sbjct: 164 HLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVG 223
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGT--EALSIFSKLNSSGMKPDLYTFSSILTIC 398
+LVTWN MI+ Q GG EA+ + + + G++PD TF+S L C
Sbjct: 224 DLVTWNTMISLLVQ-------------GGRCEEAVQVLYDMVALGVRPDGVTFASALPAC 270
Query: 399 SRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLI 455
SRL L G ++HA LK L ++ V +ALV+MY ++ A RVF V R L
Sbjct: 271 SRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLG 330
Query: 456 SWTSMITGFANH-SLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVY--EALGY 511
W +MI G+A H + +A++LF M AG P++ T G L AC+ + + EA+
Sbjct: 331 MWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHG 390
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+ + + + V + L+DM+ RLG ++EA +D + V W+ I GC
Sbjct: 391 YVVKRDMASNRFVQN---ALMDMYARLGRMDEAHTIFAMIDLR-DIVSWNTLITGC 442
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 359/650 (55%), Gaps = 41/650 (6%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y G + EA++VFD +P NVVSWT+++ GYV+ A +F M E
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSW 225
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V LG L E+ RL + E D ++ Y G L A F+
Sbjct: 226 TVMLGGLLQEGRIDEACRLFDMM--------PEKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI---SSVCGTMLS 291
+ +NV+SWTT+I +N + + F M + NE + T++ + CG +
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYTNCGRLDE 333
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+++ IK A N +++ + + G V +A+++FD M + TW+AMI
Sbjct: 334 --ASELFNAMPIKSVVACN-----AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 352 HAQM-MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ + ++L +AL +F + G++P+ + S+L++C+ L L+ G +I
Sbjct: 387 YERKGLEL------------DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREI 434
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA +++ F DV V + L++MY KCG + +A +VF + + ++ W S+ITG+A H L
Sbjct: 435 HAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLG 494
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL++F DM +G+ P+ VTFVG L+ACS G V + L F M+ +Y+++ ++HY C
Sbjct: 495 VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G + EA D I+KM E + +IW + CR H ++L AA++LL L+PK+
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKN 614
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQ 649
+ +L +I+ S GRW+DVA ++ R+ ++S+ SWI ++ KV+ F D HP+
Sbjct: 615 AGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPE 674
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVS 704
+EI ++L+ L + GY +SF L D +E V YHSEKLA+A+GLL PI
Sbjct: 675 HSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGM 734
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+ +C DCH IK+I +T REII+RD+ R H F +G C+CRD+
Sbjct: 735 PIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDY 784
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 226/493 (45%), Gaps = 57/493 (11%)
Query: 4 VPWAAAAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEAL 63
+ W + A + K Q + ++ + +T+S+ S I NG EA
Sbjct: 130 ISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYIN-NGM--------INEAR 180
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAE---------------IIHAHIVKTG---- 104
V P+ S+ ++++ V +S AE ++ +++ G
Sbjct: 181 EVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDE 240
Query: 105 --------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
+D T ++ Y + G + EA+ +FD +PR NVVSWT++I+GYVQN Q
Sbjct: 241 ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQV 300
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
++A +F M E L T C L+ + +A +K N++
Sbjct: 301 DIARKLFEVMPEKNEVSWTAML-KGYTNCGRLDEA--SELFNAMPIK-----SVVACNAM 352
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ G + A + F+++REK+ +W+ +I G + L F M EGI+PN
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+L S+ SVC + +L G ++H+ ++ + ++ V + ++ +Y+KCG + +A+++FD
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+ ++V WN++I G+AQ H G EAL +F ++ SG+ PD TF +L+
Sbjct: 473 FAVKDVVMWNSIITGYAQ-----------HGLGVEALRVFHDMHFSGIMPDDVTFVGVLS 521
Query: 397 ICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-L 454
CS +++G +I +++ K + +V++ + G++ A + +M
Sbjct: 522 ACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADA 581
Query: 455 ISWTSMITGFANH 467
I W +++ H
Sbjct: 582 IIWGALLGACRTH 594
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNA-EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
P+ S+ ++L+ N L A E+ +A +K+ + ++ F G+ G + +A
Sbjct: 311 PEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCF-----GQNGEVPKA 365
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++VFD + + +W+++I Y + A+ +F M G P +L + L+ C+ L
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ G++IHA +V+ Q + D V + L S+Y CG+L A + F+R K+V+ W ++I
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSII 485
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGY 307
++G V+ LR F M GI P++ T + S C +++ G ++ +S+ K
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ ++ L + G ++EA L + M + + W A++ M L +++A
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAA 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 151/361 (41%), Gaps = 74/361 (20%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
NSL + YS G + A F+ +R+KN++SW +++ +N + F KM +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM----SE 157
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
N + + S GY +N G+++EA+++
Sbjct: 158 RNTISWNGLVS---------------------GYINN--------------GMINEAREV 182
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M N+V+W AM+ G+ + + +EA ++F ++ P+ S
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMI-----------SEAETLFWQM------PEKNVVSW 225
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ + L++G A L DVV T ++ Y + GR+ A +F EM R
Sbjct: 226 TVMLGG---LLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRR 282
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++SWT+MITG+ + A +LFE M N+V++ L +N G + EA F
Sbjct: 283 NVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 513 EMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
M P+ C +I F + G + +A +M E +E WS I R
Sbjct: 339 NAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMR-EKDEGTWSAMIKVYERK 390
Query: 571 G 571
G
Sbjct: 391 G 391
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 413 LTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L L + S+ ++ +L+ Y + G+IE+A VF EM + +ISW S++ G+ +
Sbjct: 87 LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A +F+ M N +++ G ++ N GM+ EA F+ M + + + +
Sbjct: 147 EAQNMFDKM----SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAM 197
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KD 590
+ +V+ G I EA +M E N V W+V + G + G ++ A +L + P KD
Sbjct: 198 VRGYVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRID----EACRLFDMMPEKD 252
Query: 591 CESYAMLLDIFVSAGR 606
+ ++ + GR
Sbjct: 253 VVTRTNMIGGYCQVGR 268
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/611 (34%), Positives = 346/611 (56%), Gaps = 19/611 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S+L C + L +H+ I+K + FV LV++Y KCG +EEA++ F+ +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ VSW ++I GYVQ + A ++F M+ G P V+L + L+ C++L+++ G+
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H ++VK + G+SL +Y CG++ +A F+ + ++V+S +I +N
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN- 630
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG--YASNLRV 313
+ V+ + F +M +EG+ P+E T S+ C L +G Q+H L K G Y + +
Sbjct: 631 DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDF-L 689
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE- 371
S++ +Y+ +A LF + + + W A+I+GH Q NG +E
Sbjct: 690 GVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQ------------NGCSEE 737
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL ++ +++ + +PD TF+S+L CS L +L G IH+L G SD + G+A+V+
Sbjct: 738 ALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVD 797
Query: 432 MYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
MY KCG ++ + +VF EM ++ +ISW SMI GFA + + AL++F++M +RP+ V
Sbjct: 798 MYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDV 857
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+G L ACS+AG V E F++M YKI P +DH C+ID+ R G ++EA +FI K
Sbjct: 858 TFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDK 917
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
++FEPN +IW+ + CR HG+ G AAE+L++L+P++ Y +L +I+ ++G W++V
Sbjct: 918 LNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEV 977
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V+ RE+ L + SWI + K F D HP + EI +L +L+ K GY
Sbjct: 978 NSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAGEIHALLKDLIALMKEDGYI 1037
Query: 671 QQESFELTDEE 681
+ L DE+
Sbjct: 1038 AETDSLLEDED 1048
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 280/532 (52%), Gaps = 29/532 (5%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K S+ S+L + ++L+ ++HA +K G + + +V + L+N+Y KC ME A
Sbjct: 344 GVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAA 403
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVFD L N+V W +++ GY QN + +F +M G +P T + L+AC+ L
Sbjct: 404 KKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACL 463
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
E + +G+Q+H++++K+ E + V N+L +Y+ CG+L A + F IR ++ +SW +I
Sbjct: 464 ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAII 523
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ + + F +M+ +GI P+E +L SI S C + +L G QVH +K G
Sbjct: 524 VGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQ 583
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ L +S++ +Y+KCG ++ A+ +F M ++V+ NA+IAG+AQ N
Sbjct: 584 TCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ------------ND 631
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD-VVVGT 427
EA+ +F ++ + G+ P TF+S+L C+ L G QIH L K G L D +G
Sbjct: 632 LVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGV 691
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L+ MY R A +F E ++ I WT++I+G + S +ALQL+++M R
Sbjct: 692 SLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNAR 751
Query: 487 PNQVTFVGALAACS------NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
P+Q TF L ACS + M++ + + + E V +DM+ + G
Sbjct: 752 PDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAV-------VDMYAKCGD 804
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKD 590
++ + ++M + + + W+ I G ++G E L + + +++P D
Sbjct: 805 MKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDD 856
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/452 (32%), Positives = 256/452 (56%), Gaps = 12/452 (2%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G +++A +F +P NVV+W +ISG+V+ AI F +M + G T TLG+ L
Sbjct: 297 GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVL 356
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+A +SLE++ G +HA +K + VG+SL ++Y+ C + +A K F+ + E+N++
Sbjct: 357 SAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLV 416
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W ++G +NG A + ++ FS+M G P+EFT TSI S C + L +G Q+HS
Sbjct: 417 LWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFI 476
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IK + NL V N+++ +Y KCG ++EA++ F+ + + + V+WNA+I G+ Q D
Sbjct: 477 IKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEED----- 531
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
EA ++F ++ G+ PD + +SIL+ C+ L ALEQGEQ+H +K+G +
Sbjct: 532 ------EDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTC 585
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+ G++L++MY KCG IE A VF M +R+++S ++I G+A + L +A+ LF++M
Sbjct: 586 LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQN 644
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
G+ P+++TF L AC+ + ++QK + + L+ M++
Sbjct: 645 EGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKT 704
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+A + + + ++W+ I+G ++G E
Sbjct: 705 DADILFSEFQYPKSTILWTAIISGHTQNGCSE 736
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 235/470 (50%), Gaps = 49/470 (10%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y +L C + + +H ++K G + F L+++Y KCG++ +A+K+FD +
Sbjct: 184 TYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAV 243
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ VSWT++I+GYVQ PE A+ VF DM + G P V T +TAC L
Sbjct: 244 VDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL------- 296
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
G L+ A F ++ NV++W +I + G
Sbjct: 297 ----------------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRG 328
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
++ + FF M G++ TL S+ S ++ +L G VH+ IK G SN+ V +
Sbjct: 329 CDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGS 388
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALS 374
S++ +Y KC ++ A+K+FD + NLV WNAM+ G+AQ NG ++ +
Sbjct: 389 SLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQ------------NGYASKVMK 436
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+FS++ G PD +T++SIL+ C+ L LE G Q+H+ +K F ++ V LV+MY
Sbjct: 437 LFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYA 496
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG +E A + F + R +SW ++I G+ +A +F M+L G+ P++V+
Sbjct: 497 KCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLAS 556
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
L+ C+N + + + K ++ + LIDM+V+ G IE A
Sbjct: 557 ILSGCANLQALEQGEQVHCFLVKS-GLQTCLYAGSSLIDMYVKCGAIEAA 605
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 233/483 (48%), Gaps = 66/483 (13%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
++ IHA +K G + + +V++Y KCGN+E A K F+ L + ++++W S++S Y +
Sbjct: 100 SKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSR 159
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
E I F + G P T L++C+ L I LGKQ+H V+K E ++
Sbjct: 160 QGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFC 219
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
SL +YS CGSL A K F+ + + + +SWT +I + G + L+ F M G+
Sbjct: 220 EGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P++ ++ + C + G +D+A
Sbjct: 280 VPDQVAFVTVITAC-----------------------------------VGLGRLDDACD 304
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LF M + N+V WN MI+GH + EA+ F + +G+K T
Sbjct: 305 LFVQMPNTNVVAWNVMISGHVK-----------RGCDIEAIDFFKNMWKTGVKSTRSTLG 353
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+L+ + L AL G +HA +K G S+V VG++L+NMY KC ++E A +VF + R
Sbjct: 354 SVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER 413
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L+ W +M+ G+A + + + ++LF +M G P++ T+ L+AC+ L
Sbjct: 414 NLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACA-------CLECL 466
Query: 513 EMMQK--EYKIKPVMDHYM----CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVF 563
EM ++ + IK ++ + L+DM+ + G +EEA F+FI+ D V W+
Sbjct: 467 EMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRD----NVSWNAI 522
Query: 564 IAG 566
I G
Sbjct: 523 IVG 525
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 179/350 (51%), Gaps = 17/350 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ +G S S+L C N ++L E +H +VK+G + + L+++Y KCG
Sbjct: 542 MILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGA 601
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E A+ VF +P +VVS ++I+GY QN E AI +F +M G P+ +T + L A
Sbjct: 602 IEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITFASLLDA 660
Query: 185 CSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVM 242
C+ + LG+QIH + K D +G SL +Y A F+ + K+ +
Sbjct: 661 CTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTI 720
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
WT +I +NG + + L+ + +M +P++ T S+ C + SL G +HSL
Sbjct: 721 LWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLI 780
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN-LVTWNAMIAGHAQMMDLAKD 361
+G S+ ++++ +Y KCG + + ++F+ M N +++WN+MI G A+
Sbjct: 781 FHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAK------- 833
Query: 362 DLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
NG E AL IF ++ + ++PD TF +LT CS + +G +I
Sbjct: 834 -----NGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREI 878
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 184/387 (47%), Gaps = 56/387 (14%)
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ R K IHA +K+ +G+++ LY+ CG++ A KAFN++ ++++++W +V+
Sbjct: 95 QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G Q + F + + G+ PN+FT + S C ++ + +G QVH IK+G+
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N S++ +Y KCG + +A+K+FD + + V+W AMIAG+ Q+
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQV-----------GL 263
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL +F + G+ PD F +++T C L
Sbjct: 264 PEEALKVFEDMQKLGLVPDQVAFVTVITACVGL--------------------------- 296
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
GR++ A +FV+M +++W MI+G +A+ F++M GV+
Sbjct: 297 --------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKST 348
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEA 544
+ T L+A ++ EAL Y ++ + IK ++ + LI+M+ + +E A
Sbjct: 349 RSTLGSVLSAIAS----LEALNYGLLVHAQ-AIKQGLNSNVYVGSSLINMYAKCEKMEAA 403
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+D E N V+W+ + G ++G
Sbjct: 404 KKVFDALD-ERNLVLWNAMLGGYAQNG 429
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/626 (35%), Positives = 341/626 (54%), Gaps = 37/626 (5%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVS+TSL+ GYV++ AI +F M E + V LG L A E+ RL ++
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM- 169
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ D ++ S Y G + A F+ + ++NV+SWT +I +NGE
Sbjct: 170 -------PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVN 222
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV--GAQVHSLGIKLGYASNLRVRNS 316
+ F M NE + T++ + G + + V A++ + + A+ N+
Sbjct: 223 LARKLFEVMPER----NEVSWTAM--LVGYIQAGHVEDAAELFNAMPEHPVAAC----NA 272
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+M + + G+VD A+ +F+ M + TW+AMI + Q L EALS F
Sbjct: 273 MMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFL-----------MEALSTF 321
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++P+ + SILT+C+ L L+ G ++HA L+ F DV +AL+ MY KC
Sbjct: 322 REMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKC 381
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G +++A RVF + ++ W SMITG+A H L QAL +F DM LAG+ P+ +T++GAL
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGAL 441
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS G V E F M I+P +HY C++D+ R G +EEAFD IK M EP+
Sbjct: 442 TACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPD 501
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
VIW + CR H N E+ +AA++LL+L+P + Y +L I+ S GRWED + ++
Sbjct: 502 AVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKF 561
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQSAEIFKVLDELVEKAKCFGYKQQESF 675
L+++ SWI +V+ F D L HP+ A I ++L++L GY SF
Sbjct: 562 ISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSF 621
Query: 676 EL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L DEE S YHSE+ A+A+GLL P PI V+K+ +C DCH+ IK+I +T+
Sbjct: 622 VLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITS 681
Query: 731 REIIVRDSKRLHKFVNGHCTCRDFGV 756
REII+RD+ R H F +G C+CRD+ +
Sbjct: 682 REIILRDANRFHHFKDGFCSCRDYWI 707
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 193/390 (49%), Gaps = 24/390 (6%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
VR +A+ + + P+ SY LL ++ ++ A + +D T
Sbjct: 123 VRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEAR----RLFDEMPDRDVVAWT 178
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G + EA+ +FD +P+ NVVSWT++ISGY QN + LA +F M E
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS 238
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
L + A ++ L + E + N++ + G +++A F
Sbjct: 239 WTAMLVGYIQAGHVEDAAELFNAM--------PEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
++ E++ +W+ +I A +N ++ L F +ML G++PN ++ SI +VC + L
Sbjct: 291 EKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G +VH+ ++ + ++ ++++ +Y+KCG +D+A+++F ++V WN+MI G+A
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HA 412
Q H G +AL IF + +GM PD T+ LT CS +++G +I ++
Sbjct: 411 Q-----------HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
+T+ + + +V++ + G +E A
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEA 489
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
+G+ G ++ A+ VF+ + + +W+++I Y QN A+ F +ML G P ++
Sbjct: 277 FGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ LT C++L + G+++HA +++ + D ++L ++Y CG+L+ A + F+
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEP 396
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+++ W ++I ++G Q L F M G+ P+ T + C ++ G ++
Sbjct: 397 KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456
Query: 299 -HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+S+ + + ++ L + GLV+EA L M + V W A++
Sbjct: 457 FNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 6/197 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EALS E G + S +S+L C L +HA +++ D F ++ L+
Sbjct: 316 EALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALI 375
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y KCGN+++A++VF ++V W S+I+GY Q+ E A+ +F DM AG P +
Sbjct: 376 TMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGI 435
Query: 177 TLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-N 234
T ALTACS ++ G++I ++ V + + L G + A N
Sbjct: 436 TYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKN 495
Query: 235 RIREKNVMSWTTVIGAC 251
E + + W ++GAC
Sbjct: 496 MPVEPDAVIWGALMGAC 512
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/675 (31%), Positives = 357/675 (52%), Gaps = 20/675 (2%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLV-NVYGKCGNMEEAQKVFDNLP-RINVVSWTS 145
K L +A++ H +++ H D +++ ++ + N + VF P N + +
Sbjct: 15 KCLKHAKLAHCRLLRLNLHHDNDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNT 74
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+I G V + A+H++ M +A P + T L AC+ L LG IH+ V K
Sbjct: 75 MIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG 134
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D V ++ YS CG L A K F+ + KNV+SWT +I C E G+ + + F
Sbjct: 135 FDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFR 194
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+L G++P+ F + + C + L G + + G + N+ V S++ +Y KCG
Sbjct: 195 GLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCG 254
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGM 384
++EA+ +FDGM ++V W+AMI G+A NG EA+ +F ++ +
Sbjct: 255 SMEEARFVFDGMVEKDIVCWSAMIQGYAS------------NGLPREAIELFFEMRKVNV 302
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
+PD Y L+ C+ L ALE G L FLS+ V+GT+L++ Y KCG +E A
Sbjct: 303 RPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALG 362
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
V+ M + + + ++I+G A + A +F M G+ PN+ TFVG L C++AG+
Sbjct: 363 VYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGL 422
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V + YF M ++ + P ++HY C++D+ R G ++EA + IK M + N ++W +
Sbjct: 423 VDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLL 482
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE 624
GCR H +L + +QL++L+P + Y +L +I+ ++ RW++ +++ E+ + +
Sbjct: 483 GGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQK 542
Query: 625 TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EES 682
+SW+ + V+ F D HP S +I++ L+ L + K GY F L D EE
Sbjct: 543 LPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEE 602
Query: 683 ASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
+ HSEKLA+AF L++T I VVK+ +C DCH IK I+ +T REI++RD+
Sbjct: 603 KEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDNN 662
Query: 740 RLHKFVNGHCTCRDF 754
R H F +G C+CRD+
Sbjct: 663 RFHCFSDGACSCRDY 677
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/414 (24%), Positives = 195/414 (47%), Gaps = 15/414 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T S+V L+ C +IH+ + KTG D FV T +V Y KCG + +A
Sbjct: 102 PDSFTFSFV--LKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAW 159
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
KVFD++ NVVSWT +I G ++ + A+ +F +LE+G P + L AC+ L
Sbjct: 160 KVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLG 219
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G+ I + + + V SL +Y+ CGS+ A F+ + EK+++ W+ +I
Sbjct: 220 DLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQ 279
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
NG + + F +M ++P+ + + S C ++ +L +G L + S
Sbjct: 280 GYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLS 339
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N + S++ Y KCG ++EA ++ M + V +NA+I+G L+ +
Sbjct: 340 NPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISG-----------LAMYGQV 388
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTA 428
A +F ++ G+ P+ +TF +L C+ ++ G ++++ +
Sbjct: 389 GAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGC 448
Query: 429 LVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDML 481
+V++ + G ++ A + M + +I W S++ G H + A + + ++
Sbjct: 449 MVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLI 502
>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/580 (35%), Positives = 322/580 (55%), Gaps = 19/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L +C + S+R G+Q+H ++ DT + L LY+ CG + A + F+ + ++NV
Sbjct: 69 LQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPKRNV 128
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W +I A G +R + M+ G++P+ FT + C +L L G +VH
Sbjct: 129 FLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLETGREVHQR 188
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+ ++ V ++ +Y KCG VD+A+ +FDG++ + V WN+MIA + Q
Sbjct: 189 VSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQ------- 241
Query: 362 DLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
NG EAL++ + ++G+ P + T S ++ + AL +G ++H + GF
Sbjct: 242 -----NGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFG 296
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ T+LV+MY K G ++ A +F ++ R L+SW +MI G+ H + +AL LF M
Sbjct: 297 LQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKM 356
Query: 481 LL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
A V P+ +TFVG L+AC++ GMV EA +F +M Y IKP + HY C+ID+ G
Sbjct: 357 KGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTG 416
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
EEA+D IK M EP+ IW + GC+ H N+ELG A ++L++L+P+D +Y L +
Sbjct: 417 RFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSN 476
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +G+WE A V+ L L + SWI +K K + F D HP+S EI+ L+
Sbjct: 477 IYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELER 536
Query: 660 LVEKAKCFGYKQQ--ESFE-LTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L GY F + D+E ++ HSE+LAIAFGL++TP + +LV K+ +
Sbjct: 537 LEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRV 596
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH IK+I+ + REII+RD R H FVNG C+C+D+
Sbjct: 597 CEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDY 636
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 203/429 (47%), Gaps = 22/429 (5%)
Query: 58 GFQEALSVLTEGPKVQTSSYV-----SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF + + P++ +S + S+LQ CV SL +H ++ +G D +
Sbjct: 41 GFAASPPPPSTNPRLASSPHAYHHHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLS 100
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T LV++Y CG + A+++FD +P+ NV W LI Y + E A+ ++ M+E G
Sbjct: 101 TKLVDLYAACGQVGHARRLFDGMPKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVE 160
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P N T L AC++L + G+++H V + D V + +Y+ CG ++ A
Sbjct: 161 PDNFTYPLVLKACAALLDLETGREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAV 220
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ I ++ + W ++I A G+NG ++ L M + GI P TL S S +L
Sbjct: 221 FDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAAL 280
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G ++H G + G+ +++ S++ +Y K G V A+ LF+ + LV+WNAMI G+
Sbjct: 281 PRGRELHGFGWRRGFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGY 340
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIH 411
H EAL++F+K+ + PD TF +L+ C+ +E+ ++
Sbjct: 341 GM-----------HGHADEALALFNKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFF 389
Query: 412 ALTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHS- 468
L + + V T ++++ GR E A + MS W +++ G H
Sbjct: 390 YLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKN 449
Query: 469 --LSHQALQ 475
L ALQ
Sbjct: 450 VELGELALQ 458
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 93/185 (50%), Gaps = 12/185 (6%)
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+SIL C +L G Q+H L +G D V+ T LV++Y CG++ A R+F M
Sbjct: 66 TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGHARRLFDGMPK 125
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R + W +I +A A++L+ M+ GV P+ T+ L AC A ++ G
Sbjct: 126 RNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKAC--AALLDLETGR 183
Query: 512 FEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAG 566
E+ Q+ + D ++C ++DM+ + GC+++A FD I D V+W+ IA
Sbjct: 184 -EVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRD----AVVWNSMIAA 238
Query: 567 CRRHG 571
++G
Sbjct: 239 YGQNG 243
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/569 (35%), Positives = 319/569 (56%), Gaps = 19/569 (3%)
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G++IH+ + T N L S+Y+ CG L+ A FN I E+ V+SW+ +IGA
Sbjct: 4 GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYAL 63
Query: 254 NGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG--YASN 310
+G + L F +M ++G ++PN T T + + CG + L G ++H+L + G +SN
Sbjct: 64 HGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSN 123
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ N+++ +Y++CG ++EA+K+FD M H + +W +MI + +L
Sbjct: 124 AILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCEL-----------L 172
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL +F ++N G+ P T +S+L C+ AL+ G+QIH+ +GF S V+ TAL+
Sbjct: 173 EALELFHRMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALL 232
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG +E +S+VF M TR +SWT+MI A H +AL+LF++M L G+ +
Sbjct: 233 DMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADAT 292
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+ L ACS+AG++ E+L +F M ++Y I P HY +D R G +++A + I
Sbjct: 293 TFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHS 352
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M F P + W + CR H E AE L KL P+D +Y +L +++ + GR+ D
Sbjct: 353 MPFHPETLTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQ 412
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY- 669
V+ + L + S+I +K+KV+ F D HP EI L++L + + GY
Sbjct: 413 MRVRKGMTDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYV 472
Query: 670 -KQQESFELTDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
++ +EE HSEKLAIAFGL+ TP +P+L+VK+ +C DCH K+I
Sbjct: 473 PNTKDVLHAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVI 532
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ R I+VRD+ R H F +G C+C+D+
Sbjct: 533 AKIMRRRIVVRDTHRFHHFEDGQCSCKDY 561
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 204/422 (48%), Gaps = 24/422 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH+ + G H+ LV++Y KCG ++EA+ +F+ + VVSW+++I Y + +
Sbjct: 7 IHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYALHGR 66
Query: 156 PELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ--TEDDTSV 212
+ A+ +F M G P +T AC +E + G++IHA + + +
Sbjct: 67 GQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAIL 126
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
N+L ++Y CGSL A K F+ + + SWT++I AC EN E ++ L F +M EGI
Sbjct: 127 ENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGI 186
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P TL S+ + C +L+VG Q+HS G+ S++ + +++ +Y KCG ++ + K
Sbjct: 187 PPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSK 246
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+F M N V+W AMIA AQ H G EAL +F ++N GM D TF
Sbjct: 247 VFTAMETRNSVSWTAMIAALAQ-----------HGQGDEALELFKEMNLEGMVADATTFI 295
Query: 393 SILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+L CS +++ E H++ ++ + GR++ A + M
Sbjct: 296 CVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPF 355
Query: 452 RT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
++W +++ HS + +A ++ E LL+ + P L G VY A G
Sbjct: 356 HPETLTWKTLLNACRIHSQAERATKVAE--LLSKLAPEDSMAYTLL------GNVYAATG 407
Query: 511 YF 512
+
Sbjct: 408 RY 409
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ + C + L IHA + +G + + L+N+Y +CG++EEA+KVFD
Sbjct: 89 TFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARKVFD 148
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + SWTS+I+ +N + A+ +F M G PT+VTL + L AC+ ++++
Sbjct: 149 TMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSGALKV 208
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GKQIH+ + +L +Y+ CGSL + K F + +N +SWT +I A +
Sbjct: 209 GKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIAALAQ 268
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLR 312
+G+ + L F +M EG+ + T + C ++ + HS+ A
Sbjct: 269 HGQGDEALELFKEMNLEGMVADATTFICVLRACSHAGLIKESLEFFHSMVEDYAIAPTET 328
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
+ + G + +A++L M H +TW ++
Sbjct: 329 HYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWKTLL 366
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+E+G +IH+ GF + LV+MY KCG ++ A +F + RT++SW++MI
Sbjct: 1 MEEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGA 60
Query: 464 FANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQK 517
+A H +AL LF M G V PN +TF G AC G AL M
Sbjct: 61 YALHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALA---MASG 117
Query: 518 EYK-IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
E K ++++ L++M+VR G +EEA MD P+ W+ I C
Sbjct: 118 ELKSSNAILEN--ALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 5/208 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + + S+L C +L + IH+ + +G H T L+++Y KCG++E
Sbjct: 184 EGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLEC 243
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+ KVF + N VSWT++I+ Q+ Q + A+ +F +M G T L ACS
Sbjct: 244 SSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLRACSH 303
Query: 188 LESIRLGKQ-IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWT 245
I+ + H+ V Y + G L A + + + ++W
Sbjct: 304 AGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPETLTWK 363
Query: 246 TVIGACGENGEAVQGLR---FFSKMLSE 270
T++ AC + +A + + SK+ E
Sbjct: 364 TLLNACRIHSQAERATKVAELLSKLAPE 391
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/574 (34%), Positives = 333/574 (58%), Gaps = 11/574 (1%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
H+ VKTG D +V + L+N+Y K G + +A+K+FD +P N VSW ++ISGY +
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+ A+ VF M L + L+A +S + G+Q+H+ +K SV N+L
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++Y+ CGSL+ A++ F +KN ++W+ ++ + G++ + L+ F+KM S G+ P+E
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
FTL + + C + ++ G Q+HS KLG+ L V ++++ +Y KCG + +A+K F+
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFEC 380
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+ ++V W ++I G+ Q D + GG L+++ K+ + P+ T +S+L
Sbjct: 381 VQQPDVVLWTSIITGYVQNGD--------YEGG---LNLYGKMQMERVIPNELTMASVLR 429
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
CS L AL+QG+Q+HA +K GF +V +G+AL MY KCG ++ +F M +R +IS
Sbjct: 430 ACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVIS 489
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W +MI+G + + ++AL+LFE MLL G++P+ VTFV L+ACS+ G+V YF+MM
Sbjct: 490 WNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMF 549
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
E+ I P+++HY C++D+ R G + EA +FI+ + +W + + C+ H N ELG
Sbjct: 550 DEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELG 609
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
YA E+L++L + +Y +L I+ + G E+V V+ + + +++ SWI +K
Sbjct: 610 VYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGL 669
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V+ F D HPQ EI L+ L + GY+
Sbjct: 670 VHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQ 703
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 182/590 (30%), Positives = 290/590 (49%), Gaps = 44/590 (7%)
Query: 70 PKVQTSSYVSLLQ---ECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
PK+ + LLQ EC + K++ +HA I+KTGS +V +N+Y K ++
Sbjct: 4 PKIFPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLS 63
Query: 127 EAQKVFD--NLPRINVVSWTSLISGYVQN---SQPELAIHVFLDMLEAGNY-PTNVTLGT 180
A +FD N + VSW SLI+ + QN S AI +F M+ A N P TL
Sbjct: 64 HALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAG 123
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
+A S+L + GKQ H+ VK D VG+SL ++Y G + A K F+R+ E+N
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERN 183
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW T+I + A + + F M E NEF LTS+ S + + + G QVHS
Sbjct: 184 TVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHS 243
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L IK G + + V N+++ +Y KCG +D+A + F+ N +TW+AM+ G+AQ D K
Sbjct: 244 LAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK 303
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
AL +F+K++SSG+ P +T ++ CS L A+ +G+Q+H+ K GF
Sbjct: 304 -----------ALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFG 352
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ V +A+V+MY KCG + A + F + ++ WTS+ITG+ + L L+ M
Sbjct: 353 LQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKM 412
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+ V PN++T L ACS+ + + + K Y K + L M+ + G
Sbjct: 413 QMERVIPNELTMASVLRACSSLAALDQGKQMHARIIK-YGFKLEVPIGSALSAMYTKCGS 471
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRR--HGNMELGFYAAEQLLKLKP---------- 588
+++ + +M + + W+ I+G + HGN L + L +KP
Sbjct: 472 LDDGYLIFWRMP-SRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLS 530
Query: 589 ---------KDCESYAMLLDIFVSAGRWEDVA-VVKNLTREEKLSETDDW 628
+ E + M+ D F A E A +V L+R KL+E ++
Sbjct: 531 ACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEF 580
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 202/375 (53%), Gaps = 15/375 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H+ +K G V LV +Y KCG++++A + F+ N ++W+++++GY Q
Sbjct: 241 VHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGD 300
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ A+ +F M +G P+ TL + ACS L ++ GKQ+H++ K V ++
Sbjct: 301 SDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSA 360
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +Y+ CGSL A K F +++ +V+ WT++I +NG+ GL + KM E + PN
Sbjct: 361 VVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPN 420
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E T+ S+ C ++ +L G Q+H+ IK G+ + + +++ +Y KCG +D+ +F
Sbjct: 421 ELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFW 480
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M ++++WNAMI+G LS + G +AL +F K+ G+KPD TF ++L
Sbjct: 481 RMPSRDVISWNAMISG-----------LSQNGHGNKALELFEKMLLEGIKPDPVTFVNLL 529
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMST--R 452
+ CS + +++G + + ++ +V A +V++ + G++ A + F+E +T
Sbjct: 530 SACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEA-KEFIESATVDH 588
Query: 453 TLISWTSMITGFANH 467
L W ++ NH
Sbjct: 589 GLCLWRILLGACKNH 603
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/719 (30%), Positives = 380/719 (52%), Gaps = 37/719 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G ++VS+L C SL+ IH + +G + LV +Y + G++ +
Sbjct: 104 QGLGTDHVTFVSVLGAC---SSLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGD 160
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++F +L + SW ++I + Q+ A+ +F +M + P + T ++ S+
Sbjct: 161 AKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFST 219
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
E + G++IHA +V + D V +L ++Y CGS + A + F+++++++++SW +
Sbjct: 220 PEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVM 279
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG +NG+ + L + K+ EG + + T SI C ++ +L G VHS ++ G
Sbjct: 280 IGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGL 339
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA-- 365
S + V +++ +Y KCG ++EA+K+F+ M + + V W+ +I +A KD A
Sbjct: 340 DSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASN-GYGKDARKARK 398
Query: 366 ---------------------HNG-GTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLV 402
NG A+ IF ++ ++G+KPD TF ++L C+ L
Sbjct: 399 VFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLG 458
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
L + + +HA ++ S+VVV L+NMY +CG +E A R+F +T++SWT+M+
Sbjct: 459 RLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVA 518
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
F+ + +AL LF++M L GV+P+ VT+ L C++ G + + YF M + + +
Sbjct: 519 AFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLA 578
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P DH+ ++D+ R G + +A + ++ M FEP+ V W F+ CR HG +ELG AAE+
Sbjct: 579 PTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAER 638
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P Y + +I+ + G WE VA V+ E L + S+I + K++ F
Sbjct: 639 VYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSS 698
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL 697
HP++ EI + L L + GY L D +E+ +YHSEK+AIAFGL
Sbjct: 699 GGKYHPRTDEICEELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGL 758
Query: 698 LNTPIVS-PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF-VNGHCTCRDF 754
+++ PI VVK+ +C DCH K I + R+II+RD R H+F +G C+C D+
Sbjct: 759 VSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDY 817
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 220/441 (49%), Gaps = 31/441 (7%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P NVT T L +CSS + G+ +H + + E DT VGN+L S+Y C SL A
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 233 FNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F + R++NV+SW +I A +NG + + L + +M +G+ + T S+ C
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS--- 121
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
SL G ++H+ G S + N+++ +Y + G V +A+++F + + +WNA+I
Sbjct: 122 SLAQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
H+Q D + AL IF ++ MKP+ T+ ++++ S L +G +I
Sbjct: 182 AHSQSGDWSG-----------ALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKI 229
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA + GF SD+VV TAL+NMY KCG A VF +M R ++SW MI + +
Sbjct: 230 HAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDF 289
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK---EYKIKPVMDH 527
H+AL+L++ + + G + + TFV L ACS+ +AL ++ E + +
Sbjct: 290 HEALELYQKLDMEGFKRTKATFVSILGACSSV----KALAQGRLVHSHILERGLDSEVAV 345
Query: 528 YMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
L++M+ + G +EEA F+ +K D V WS I +G + A +
Sbjct: 346 ATALVNMYAKCGSLEEARKVFNAMKNRD----AVAWSTLIGAYASNGYGKDARKARKVFD 401
Query: 585 KLKPKDCESYAMLLDIFVSAG 605
+L +D + ++ +V G
Sbjct: 402 RLGSRDTICWNAMITTYVQNG 422
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 148/294 (50%), Gaps = 46/294 (15%)
Query: 54 VRSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++ F EAL + EG K +++VS+L C + K+L+ ++H+HI++ G +
Sbjct: 284 VQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEV 343
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG-------------------- 149
V T LVN+Y KCG++EEA+KVF+ + + V+W++LI
Sbjct: 344 AVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL 403
Query: 150 --------------YVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLG 194
YVQN A+ +F +M AG P VT L AC+SL +
Sbjct: 404 GSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEV 463
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K +HA + + + E + V N+L ++Y+ CGSL A + F +EK V+SWT ++ A +
Sbjct: 464 KALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQY 523
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-------AQVHSL 301
G + L F +M EG++P++ T TSI VC SL G A++H L
Sbjct: 524 GRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGL 577
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
+PD TF ++L CS + +G +H + F D +VG AL++MY KC + A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 445 VFVEMS--TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
VF M R ++SW +MI +A + S +AL L+ M L G+ + VTFV L ACS+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 503 G--------MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
+ Y L F+ + L+ M+ R G + +A + +
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLAN------------ALVTMYARFGSVGDAKRMFQSLQTR 171
Query: 555 PNEVIWSVFIAGCRRHGN 572
+E W+ I + G+
Sbjct: 172 -DETSWNAVILAHSQSGD 188
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 358/650 (55%), Gaps = 41/650 (6%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y G + EA++VFD +P NVVSWT+++ GYV+ A +F M E
Sbjct: 166 LVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSW 225
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V LG L E+ RL E D ++ Y G L A F+
Sbjct: 226 TVMLGGLLQEGRIDEACRL--------FDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFD 277
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI---SSVCGTMLS 291
+ +NV+SWTT+I +N + + F M + NE + T++ + CG +
Sbjct: 278 EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYTNCGRLDE 333
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+++ IK A N +++ + + G V +A+++FD M + TW+AMI
Sbjct: 334 --ASELFNAMPIKSVVACN-----AMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKV 386
Query: 352 HAQM-MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ + ++L +AL +F + G++P+ + S+L++C+ L L+ G +I
Sbjct: 387 YERKGLEL------------DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREI 434
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA +++ F DV V + L++MY KCG + +A +VF + + ++ W S+ITG+A H L
Sbjct: 435 HAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLG 494
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL++F DM +G+ P+ VTFVG L+ACS G V + L F M+ +Y+++ ++HY C
Sbjct: 495 VEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYAC 554
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G + EA D I+KM E + +IW + CR H ++L AA++LL L+PK+
Sbjct: 555 MVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKN 614
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQ 649
+ +L +I+ S GRW+DVA ++ R+ ++S+ SWI ++ KV+ F D HP+
Sbjct: 615 AGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPE 674
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVS 704
+EI ++L+ L + GY +SF L D +E V YHSEKLA+A+GLL PI
Sbjct: 675 HSEINRILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGM 734
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+ +C DCH IK+I +T REII+RD+ R H F +G C+CRD+
Sbjct: 735 PIRVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDY 784
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/493 (24%), Positives = 226/493 (45%), Gaps = 57/493 (11%)
Query: 4 VPWAAAAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEAL 63
+ W + A + K Q + ++ + +T+S+ S I NG EA
Sbjct: 130 ISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYIN-NGM--------INEAR 180
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAE---------------IIHAHIVKTG---- 104
V P+ S+ ++++ V +S AE ++ +++ G
Sbjct: 181 EVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDE 240
Query: 105 --------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
+D T ++ Y + G + EA+ +FD +PR NVVSWT++I+GYVQN Q
Sbjct: 241 ACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQV 300
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
++A +F M E L T C L+ + +A +K N++
Sbjct: 301 DIARKLFEVMPEKNEVSWTAML-KGYTNCGRLDEA--SELFNAMPIK-----SVVACNAM 352
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ G + A + F+++REK+ +W+ +I G + L F M EGI+PN
Sbjct: 353 ILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNF 412
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+L S+ SVC + +L G ++H+ ++ + ++ V + ++ +Y+KCG + +A+++FD
Sbjct: 413 PSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR 472
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+ ++V WN++I G+AQ H G EAL +F ++ SG+ PD TF +L+
Sbjct: 473 FAVKDVVMWNSIITGYAQ-----------HGLGVEALRVFHDMHFSGIMPDDVTFVGVLS 521
Query: 397 ICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-L 454
CS +++G +I +++ K + +V++ + G++ A + +M
Sbjct: 522 ACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADA 581
Query: 455 ISWTSMITGFANH 467
I W +++ H
Sbjct: 582 IIWGALLGACRTH 594
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 148/299 (49%), Gaps = 8/299 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNA-EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
P+ S+ ++L+ N L A E+ +A +K+ + ++ F G+ G + +A
Sbjct: 311 PEKNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCF-----GQNGEVPKA 365
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++VFD + + +W+++I Y + A+ +F M G P +L + L+ C+ L
Sbjct: 366 RQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGL 425
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ G++IHA +V+ Q + D V + L S+Y CG+L A + F+R K+V+ W ++I
Sbjct: 426 ANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSII 485
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGY 307
++G V+ LR F M GI P++ T + S C +++ G ++ +S+ K
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ ++ L + G ++EA L + M + + W A++ M L +++A
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAA 604
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 150/361 (41%), Gaps = 74/361 (20%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
NSL + YS G + A F+ +R+KN++SW +++ +N + F KM +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM----SE 157
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
N + + S GY +N G+++EA+++
Sbjct: 158 RNTISWNGLVS---------------------GYINN--------------GMINEAREV 182
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M N+V+W AM+ G+ + +EA ++F ++ P+ S
Sbjct: 183 FDRMPERNVVSWTAMVRGYVK-----------EGMISEAETLFWQM------PEKNVVSW 225
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ + L++G A L DVV T ++ Y + GR+ A +F EM R
Sbjct: 226 TVMLGG---LLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRR 282
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++SWT+MITG+ + A +LFE M N+V++ L +N G + EA F
Sbjct: 283 NVVSWTTMITGYVQNQQVDIARKLFEVM----PEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 513 EMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
M P+ C +I F + G + +A +M E +E WS I R
Sbjct: 339 NAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMR-EKDEGTWSAMIKVYERK 390
Query: 571 G 571
G
Sbjct: 391 G 391
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 16/196 (8%)
Query: 413 LTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
L L + S+ ++ +L+ Y + G+IE+A VF EM + +ISW S++ G+ +
Sbjct: 87 LVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQ 146
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A +F+ M N +++ G ++ N GM+ EA F+ M + + + +
Sbjct: 147 EAQNMFDKM----SERNTISWNGLVSGYINNGMINEAREVFDRMPERNVVS-----WTAM 197
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KD 590
+ +V+ G I EA +M E N V W+V + G + G ++ A +L + P KD
Sbjct: 198 VRGYVKEGMISEAETLFWQMP-EKNVVSWTVMLGGLLQEGRID----EACRLFDMMPEKD 252
Query: 591 CESYAMLLDIFVSAGR 606
+ ++ + GR
Sbjct: 253 VVTRTNMIGGYCQVGR 268
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 349/664 (52%), Gaps = 50/664 (7%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H I SHQ+ + L+ Y CG +KVFD + NVV + +I YV N +
Sbjct: 40 LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHR 99
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ + VF +M+ G P N T L ACS E++R G IH V+K + + VGN
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNG 159
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L ++Y CG L A + F+ + K+V+SW +++ N L +M G +P+
Sbjct: 160 LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPD 219
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T+ S+ S +++Y+ +K+F
Sbjct: 220 GCTMASLMPAVANTSS-----------------------ENVLYV----------EKIFV 246
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
+ NL++WN MI + K+ L T+A+ ++ ++ ++PD TF+S+L
Sbjct: 247 NLERKNLISWNVMIRVYM------KNSLP-----TQAVDLYLQMEKCRVEPDAITFASVL 295
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C L AL G +IH K ++++ +L++MY +CG ++ A RVF M R +
Sbjct: 296 PACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVA 355
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWTS+I+ + A+ LF +ML +G P+ + FV L+ACS++G++ E YF+ M
Sbjct: 356 SWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQM 415
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+Y+I P ++HY CL+D+ R G ++EA++ IK+M EPNE +W+ ++ CR NM++
Sbjct: 416 TDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDI 475
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G AA+ LL+L P+ Y +L +I+ AGRW++V ++++ + +K+ +T S + + +
Sbjct: 476 GILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNN 535
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEK 690
+V++F D HPQS EI++ L LV K K GY + E D+E HSEK
Sbjct: 536 QVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDVEEEDKEGHLAVHSEK 595
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LAI F LLNT I + K+ +C DCH K+I+ + REIIVRD+ R H F +G C+
Sbjct: 596 LAIVFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNRFHHFKDGVCS 654
Query: 751 CRDF 754
C D+
Sbjct: 655 CGDY 658
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/470 (24%), Positives = 201/470 (42%), Gaps = 83/470 (17%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ G A I+ K++H + + + S+G L Y+ CG K F+ +
Sbjct: 20 SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM 79
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
++NV+ + +I + N GL F +M++ G +P+ +T + C +LR G
Sbjct: 80 SDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGL 139
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H +K+G NL V N ++ +Y KCG + EA+++FD M ++V+WN+M+AG+A M
Sbjct: 140 LIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNM 199
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
DD AL I ++ G KPD T +S++
Sbjct: 200 RF--DD---------ALEICREMEDYGQKPDGCTMASLMP-------------------- 228
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
V T+ N + ++FV + + LISW MI + +SL QA+ L
Sbjct: 229 ------AVANTSSEN-------VLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDL 275
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
+ M V P+ +TF L AC + + E ++K+ K+ P + LIDM+
Sbjct: 276 YLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKK-KLCPNLLLENSLIDMYA 334
Query: 537 RLGCIEEAFDFIKKMDFE----------------------------------PNEVIWSV 562
R GC+++A +M F P+ + +
Sbjct: 335 RCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVA 394
Query: 563 FIAGCRRHGNMELGFYAAEQL---LKLKPKDCESYAMLLDIFVSAGRWED 609
++ C G ++ G +Q+ ++ P+ E YA L+D+ AGR ++
Sbjct: 395 ILSACSHSGLLDEGRIYFKQMTDDYRITPR-IEHYACLVDLLGRAGRVDE 443
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 184/396 (46%), Gaps = 49/396 (12%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ + L V E G + +Y +L+ C ++L +IH ++K G + FV
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNG 159
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +YGKCG + EA++VFD + +VVSW S+++GY N + + A+ + +M + G P
Sbjct: 160 LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPD 219
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T+ + + A + +TS N L K F
Sbjct: 220 GCTMASLMPAVA----------------------NTSSENVL-----------YVEKIFV 246
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ KN++SW +I +N Q + + +M ++P+ T S+ CG + +L +
Sbjct: 247 NLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLL 306
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++H K NL + NS++ +Y +CG +D+A+++FD M ++ +W ++I+ +
Sbjct: 307 GRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGM 366
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHAL 413
G A+++F+++ +SG PD F +IL+ CS L++G +
Sbjct: 367 T-----------GQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQM 415
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T + LV++ + GR++ A + +M
Sbjct: 416 TDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQM 451
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
NS P +++ + P T + S+L C + +L IH ++ K +
Sbjct: 266 NSLPTQAVDLYLQMEKCRVEPDAIT--FASVLPACGDLSALLLGRRIHEYVEKKKLCPNL 323
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ L+++Y +CG +++A++VFD + +V SWTSLIS Y Q A+ +F +ML +
Sbjct: 324 LLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNS 383
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL---CSLYSTCGSL 226
G P ++ L+ACS + G+ + Q DD + + L G
Sbjct: 384 GQAPDSIAFVAILSACSHSGLLDEGR-----IYFKQMTDDYRITPRIEHYACLVDLLGRA 438
Query: 227 NSAIKAFNRIR----EKNVMSWTTVIGAC 251
+A+N I+ E N W T++ +C
Sbjct: 439 GRVDEAYNIIKQMPIEPNERVWATLLSSC 467
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/701 (30%), Positives = 375/701 (53%), Gaps = 34/701 (4%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K + +Y +++ SL + IHA ++K D +V L+++Y K G +A
Sbjct: 121 GVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDA 180
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P ++VSW S+ISGY+ ++ +F +ML+ G P + +AL ACS +
Sbjct: 181 EKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHV 240
Query: 189 ESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
S +GK++H + V+ + E D V S+ +YS G ++ A + F I ++N+++W +
Sbjct: 241 YSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVL 300
Query: 248 IGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
IG N F KM + G+QP+ TL ++ C + G +H ++ G
Sbjct: 301 IGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAIL----EGRTIHGYAMRRG 356
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ ++ + +++ +Y + G + A+ +FD ++ NL++WN++IA + Q
Sbjct: 357 FLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQ------------ 404
Query: 367 NGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG AL +F KL S + PD T +SIL + ++L +G QIHA +K+ + S+ ++
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII 464
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+LV+MY CG +E A + F + + ++SW S+I +A H ++ LF +M+ + V
Sbjct: 465 LNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKV 524
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
PN+ TF LAACS +GMV E YFE M++EY I P ++HY ++D+ R G A
Sbjct: 525 DPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAK 584
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
FI++M F P IW + R H ++ + +AAEQ+ K++ + Y +LL+++ A
Sbjct: 585 RFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEAR 644
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
RWEDV +K L + +S T S + K K + D H ++ +I++VLD + ++
Sbjct: 645 RWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNGDRSHVETNKIYEVLDIV---SR 701
Query: 666 CFGYKQQESFEL------------TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
G +++E + ++ HS +LA FGL++T + V +T
Sbjct: 702 MIGEEEEEDSYVHYVSKLRRETLAKSRSNSPRRHSVRLATCFGLISTETGRTVTVRNNTR 761
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+CR CH F++ + +T REI+V DSK H F NG C+C ++
Sbjct: 762 ICRKCHEFLEKASKMTRREIVVGDSKIFHHFSNGRCSCGNY 802
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 197/382 (51%), Gaps = 17/382 (4%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
+ G ME+A ++FD + + + W +I G+ A+ ++ M+ +G + T
Sbjct: 70 FADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTY 129
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ + + + S+ GK+IHA V+K + D V NSL SLY G A K F + E
Sbjct: 130 PFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPE 189
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++++SW ++I + + L F +ML G +P+ F+ S C + S +G ++
Sbjct: 190 RDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKEL 249
Query: 299 HSLGIKLGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
H ++ + ++ V SI+ +Y K G V A+++F + N+V WN +I +A+
Sbjct: 250 HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYAR--- 306
Query: 358 LAKDDLSAHNGGTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
++ T+A F K++ +G++PD+ T ++L C A+ +G IH ++
Sbjct: 307 --------NSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHGYAMR 354
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GFL +V+ TAL++MY + G+++ A +F ++ + LISW S+I + + ++ AL+L
Sbjct: 355 RGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALEL 414
Query: 477 FEDMLLAGVRPNQVTFVGALAA 498
F+ + + + P+ T L A
Sbjct: 415 FQKLWDSSLLPDSTTIASILPA 436
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 131/251 (52%), Gaps = 29/251 (11%)
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
GL+++A +LFD M+ + WN MI G ++ EAL ++ ++ SG+
Sbjct: 74 GLMEDALQLFDEMNKADTFVWNVMIKG-----------FTSCGLYFEALQLYCRMVFSGV 122
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
K D +T+ ++ + + +LE+G++IHA+ +K F+SDV V +L+++Y K G A +
Sbjct: 123 KADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEK 182
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
VF EM R ++SW SMI+G+ ++L LF++ML G +P++ + + AL ACS+
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHV-- 240
Query: 505 VYEALGYFEMMQKEYKIKPVMDH--------YMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
Y M KE V ++DM+ + G + A + I K + N
Sbjct: 241 ------YSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFKCIIQRN 293
Query: 557 EVIWSVFIAGC 567
V W+V I GC
Sbjct: 294 IVAWNVLI-GC 303
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/726 (31%), Positives = 373/726 (51%), Gaps = 53/726 (7%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
AL V P+ + SY +++ + + A + + +D F ++ Y +
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVR 123
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL--- 178
+ +A+++FD +P +VVSW SL+SGY QN + A VF +M E + N L
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAY 183
Query: 179 ---GTALTACSSLES------IRLGKQIHAYVVKYQTED-----------DTSVGNSLCS 218
G AC ES I + +V K + D D N++ S
Sbjct: 184 VHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMIS 243
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
Y+ G L+ A + F+ ++V +WT ++ +NG + FF +M + NE +
Sbjct: 244 GYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVS 299
Query: 279 LTSISSVCGTMLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
++ + + + ++ S+ + N+ N+++ Y + G + +A+K FD M
Sbjct: 300 YNAMIAGYVQTKKMDIARELFESMPCR-----NISSWNTMITGYGQIGDIAQARKFFDMM 354
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
+ V+W A+IAG+AQ S H EAL++F ++ G + TF L+
Sbjct: 355 PQRDCVSWAAIIAGYAQ---------SGHY--EEALNMFVEIKQDGESLNRATFGCALST 403
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ + ALE G+QIH +K G+ + VG AL+ MY KCG I+ A+ F + + ++SW
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+M+ G+A H QAL +FE M AGV+P+++T VG L+ACS+ G++ YF M K
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
+Y + P HY C+ID+ R G +EEA D I+ M F+P W + R HGN ELG
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE 583
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AAE + K++P++ Y +L +++ ++GRW D +++ R+ + + +SW+ +++K+
Sbjct: 584 KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKI 643
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLA 692
++F D HP+ I+ L+EL K + GY L D +E YHSEKLA
Sbjct: 644 HTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLA 703
Query: 693 IAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
+AFG+L P PI V+K+ +C DCH+ IK I+ + R II+RDS R H F G C+C
Sbjct: 704 VAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCG 763
Query: 753 DFGVSF 758
D+ + F
Sbjct: 764 DYWLQF 769
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 52/253 (20%)
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G++ YF M +EY + P HY C+ID+ R+ +EE
Sbjct: 778 GLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG-----------------A 820
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
+ R HGN ELG AA+ K+ P++ M DV V K
Sbjct: 821 LLGASRIHGNTELGEKAAQMFFKMGPQNSGISKM-----------RDVGVQK-------- 861
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEES 682
+SW +++K+++F L + I L+EL K + +++ + +
Sbjct: 862 --VPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEKERTLK------ 912
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTT-MCRDCHNFIKIITSLTAREIIVRDSKRL 741
Y SE LA A G+L P+ P V+K +C DC + IK ++ + R I +RDS
Sbjct: 913 ---YLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDS--- 966
Query: 742 HKFVNGHCTCRDF 754
H+F C+C ++
Sbjct: 967 HRFNESICSCGEY 979
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N + +++ G D A +F+ M + V++NAMI+G+ + +K +L A +
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN---SKFNL--------ARN 101
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ DL++++ +LT R L ++ L + DVV +L++ Y
Sbjct: 102 LFDQMPER----DLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYA 153
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE----------DMLLAG 484
+ G ++ A VF M + ISW ++ + ++ +A LFE + L+ G
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 485 -VRPNQVTFVGAL-------AACSNAGMV--YEALGYFEMMQKEYKIKPVMD--HYMCLI 532
VR ++ L A S M+ Y G ++ + P D + ++
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+V+ G ++EA F +M E NEV ++ IAG + M++ A +L + P C
Sbjct: 274 SGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDI----ARELFESMP--CR 326
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+ + + G+ D+A + + + + D SW I
Sbjct: 327 NISSWNTMITGYGQIGDIAQARKFF--DMMPQRDCVSWAAI 365
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D++ ++ + + G + A VF M R+ +S+ +MI+G+ +S + A LF+ M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+ V G + C + +A F++M ++ + + L+ + + G +
Sbjct: 108 ERDLFSWNVMLTGYVRNCR----LGDARRLFDLMPEKDVVS-----WNSLLSGYAQNGYV 158
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+EA + M E N + W+ +A +G +E
Sbjct: 159 DEAREVFDNMP-EKNSISWNGLLAAYVHNGRIE 190
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/660 (32%), Positives = 357/660 (54%), Gaps = 18/660 (2%)
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+ G D FV + +V Y K + A+KVFD + + V W +++SG V+NS + AI
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAI 192
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F DM++ G + T+ L + L+ + LG I +K V L LY
Sbjct: 193 LIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLY 252
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
S CG + +A F +I + +++S+ +I N E +R F ++L G + N ++
Sbjct: 253 SKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIV 312
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
+ V L + +H K G SN V ++ +Y + ++ A+ LFD S
Sbjct: 313 GLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEK 372
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICS 399
+L +WNAMI+G+AQ NG TE A+S+F ++ ++P+ T +SIL+ C+
Sbjct: 373 SLASWNAMISGYAQ------------NGLTEKAISLFQEMQKCEVRPNPVTVTSILSACA 420
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
+L AL G+ +H L + F S++ V TAL++MY KCG I A R+F M + ++W +
Sbjct: 421 QLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNA 480
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
MI+G+ H H+AL LF +ML + V P VTF+ L ACS+AG+V E F M ++
Sbjct: 481 MISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDH 540
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
+P+ +HY C++D+ R G +++A DFI+KM EP +W + C H + L A
Sbjct: 541 GFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLA 600
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
+++L +L P++ Y +L +I+ + + + A V+ + + KL++T + I + + ++
Sbjct: 601 SDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVANTLHI 660
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASVY---HSEKLAIA 694
F D HPQ+ I+ +L++L K + G++ + L D EE + HSEKLAIA
Sbjct: 661 FTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSEKLAIA 720
Query: 695 FGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
FGL+ + + I ++K+ +C DCHN K I+ +T R I+VRD+ R H F +G C+C D+
Sbjct: 721 FGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGICSCGDY 780
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/499 (26%), Positives = 238/499 (47%), Gaps = 18/499 (3%)
Query: 75 SSYVSLLQECVNRKS-LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
+S +L +NR S L HA I+ G H D +T L + +++A +F
Sbjct: 7 ASTRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFS 66
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIR 192
+P ++ + LI + N+ P A+ ++ + ++ P N T ++ +S +
Sbjct: 67 TIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISG-ASSLGLG 125
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
L H+ V + + D VG+++ + Y + +A K F+ + E++ + W T++
Sbjct: 126 LLLHAHSIVAGFGS--DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLV 183
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+N + + F M+ GI + T+ ++ + L +G + L +K+G+ S+
Sbjct: 184 KNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAY 243
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V + LY KCG ++ A+ LF + +LV++NAMI+G+ + +N +
Sbjct: 244 VITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGY-----------TCNNETESS 292
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F +L SG K + + ++ + L IH K+G +S+ V TAL +
Sbjct: 293 VRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTV 352
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y + IE A +F E S ++L SW +MI+G+A + L+ +A+ LF++M VRPN VT
Sbjct: 353 YSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTV 412
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
L+AC+ G + +++ +E + + LIDM+ + G I EA M
Sbjct: 413 TSILSACAQLGALSLGKWVHDLINRE-SFESNIFVSTALIDMYAKCGSITEAQRLFSMMP 471
Query: 553 FEPNEVIWSVFIAGCRRHG 571
E N V W+ I+G HG
Sbjct: 472 -EKNAVTWNAMISGYGLHG 489
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G KV +SS V L+ L IH K+G + V T L VY +
Sbjct: 299 LLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNE 358
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E A+ +FD ++ SW ++ISGY QN E AI +F +M + P VT+ + L+A
Sbjct: 359 IESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSA 418
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L ++ LGK +H + + E + V +L +Y+ CGS+ A + F+ + EKN ++W
Sbjct: 419 CAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTW 478
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+I G +G + L F++ML + P T S+ C +R G ++
Sbjct: 479 NAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEI 532
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 6/198 (3%)
Query: 60 QEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++A+S+ E K + + S+L C +LS + +H I + + FV T L
Sbjct: 391 EKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTAL 450
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG++ EAQ++F +P N V+W ++ISGY + A+++F +ML + PT
Sbjct: 451 IDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTG 510
Query: 176 VTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT + L ACS +R G +I + V + E + L G+L+ A+
Sbjct: 511 VTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIR 570
Query: 235 RIR-EKNVMSWTTVIGAC 251
++ E W ++GAC
Sbjct: 571 KMPVEPGPPVWGALLGAC 588
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/693 (30%), Positives = 366/693 (52%), Gaps = 37/693 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +V ++L+ + + A +H+ K G + FV + L++ Y C + +
Sbjct: 156 EGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSD 215
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VF+ + R + V WT+++S Y +N PE A +CS
Sbjct: 216 AEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFR-------------------CAQSCSL 256
Query: 188 LESIRLGKQ-IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L +I +Q IH +K + + VG +L +Y+ CG + A AF I +V+ +
Sbjct: 257 L-AISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSF 315
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I ++ + Q F +++ + PNE++L+S+ C M+ L G Q+H+ IK+G
Sbjct: 316 MISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIG 375
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ S+L V N++M Y KC +D + K+F + N V+WN ++ G +Q
Sbjct: 376 HESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQ-----------S 424
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EALS+F ++ ++ M T+SS+L C+ ++ QIH K+ F +D V+G
Sbjct: 425 GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIG 484
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L++ Y KCG I A +VF + R +ISW ++I+G+A H + AL+LF+ M + V
Sbjct: 485 NSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVE 544
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
N +TFV L+ C + G+V L F+ M+ ++ IKP M+HY C++ + R G + +A
Sbjct: 545 SNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQ 604
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI + P+ ++W ++ C H N+ LG ++AE++L+++P+D +Y +L +++ +AG
Sbjct: 605 FIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGS 664
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
+ VA+++ R + + SW+ IK ++++F HP I +L+ L K
Sbjct: 665 LDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSR 724
Query: 667 FGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY + L D E+ + HSE+LA+A+GL+ TP PI ++K+ C DCH
Sbjct: 725 EGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTA 784
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+I+ + REIIVRD R H F +G C+C D+
Sbjct: 785 FTVISKIVKREIIVRDINRFHHFEDGKCSCGDY 817
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 241/513 (46%), Gaps = 36/513 (7%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVY 119
+L++L P V + + LQ C+ R +H H+V+ G D F L+N+Y
Sbjct: 47 SLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMY 106
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
GK G + A+++FD +P N+VS+ +L+ + Q E A +F + G+ L
Sbjct: 107 GKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLT 166
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T L ++++ L +H+ K + + VG+ L YS C ++ A FN I K
Sbjct: 167 TMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRK 226
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ + WT ++ EN R +L +IS R G +H
Sbjct: 227 DAVVWTAMVSCYSENDCPENAFRC----------AQSCSLLAISCA-------RQG--IH 267
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
IK + V +++ +Y KCG + +A+ F+ + + +++ + MI+ +AQ
Sbjct: 268 GCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQ----- 322
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
N +A +F +L S + P+ Y+ SS+L C+ +V L+ G+QIH +K G
Sbjct: 323 ------SNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGH 376
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
SD+ VG AL++ Y KC ++ + ++F + +SW +++ GF+ L +AL +F +
Sbjct: 377 ESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCE 436
Query: 480 MLLAGVRPNQVTFVGALAAC-SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M A + QVT+ L AC S A + + + + + + V+ + LID + +
Sbjct: 437 MQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGN--SLIDTYAKC 494
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
G I +A + + E + + W+ I+G HG
Sbjct: 495 GYIRDALKVFQHL-MERDIISWNAIISGYALHG 526
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/709 (30%), Positives = 362/709 (51%), Gaps = 46/709 (6%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L+ ++ +H ++K G D + L+++Y KCG + A +VF +P N
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIH 198
VVSWT+L+ G++++ + + M + P TL +L AC + + G IH
Sbjct: 70 VVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIH 129
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
V+ E V NSL LYS G + A + F+ +N+++W +I G
Sbjct: 130 GACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGR 189
Query: 259 QGLRFFSKMLS-----EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY--ASNL 311
L F +M E QP+EFT S+ CG++ + R GAQVH+ + G ASN
Sbjct: 190 DSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNA 249
Query: 312 RVRNSIMYLYLKCG-LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ +++ +Y+KC L+ A ++F+ + N + W +I GHAQ +
Sbjct: 250 ILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQV-----------K 298
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EA+ +F + SSG++ D + SS++ + + +EQG Q+H T+KT DV V +L+
Sbjct: 299 EAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLI 358
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG + A+R F E+ R ++SWT+MI G H +A+ +FE+M GV P++V
Sbjct: 359 DMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEV 418
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
++ L+ACS++G+V E YF ++ + +++P +HY C++D+ R G + EA D +
Sbjct: 419 AYLALLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVAT 478
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M P +W ++ CR H N+ +G A E LL + + +Y ML +IF AG W +
Sbjct: 479 MPMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWREC 538
Query: 611 AVVKNLTREEKLSETDDWSWIRI-KDKVYSFKPNDGLHPQSAEIFKVLDELVEKA--KCF 667
V+ R L + SW+ + K+ + + D HP++A+I VL + VE+ +
Sbjct: 539 QRVRGAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRD-VERTMRERL 597
Query: 668 GYK-------QQESFELTDEESAS---VYHSEKLAIAFGLL------------NTPIVSP 705
GY + + DEES + HSE+LA+ LL T
Sbjct: 598 GYSPGSSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEV 657
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH F K ++S+ R ++VRD+ R H+F +G C+C+D+
Sbjct: 658 IRVYKNLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDY 706
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/701 (31%), Positives = 374/701 (53%), Gaps = 27/701 (3%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L C + N IH I+K +D FV LV+ Y +CG ++ A+KVFD + NV
Sbjct: 140 LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNV 199
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHA 199
VSWTS+I GY + + A+ +F M+ + P +VT+ ++AC+ LE + G++++
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD 259
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
++ E + + ++L +Y C +++ A + F+ N+ + G +
Sbjct: 260 FIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE 319
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L + M+ GI+P+ ++ S S C + ++ G H ++ G+ S + N+++
Sbjct: 320 ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 379
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAKDD--------------- 362
+Y+KC D A ++FD MS+ +VTWN+++AG+ + +D A +
Sbjct: 380 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTI 439
Query: 363 ---LSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
L N EA+ +F + S + D T SI + C L AL+ + I+ K
Sbjct: 440 ISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNR 499
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
DV +GT LV+M+ +CG E A +F ++ R + +WT+ I A +A++LF
Sbjct: 500 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFN 559
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+M+ G++P+ V F+GAL AC + G+V + F M+K + + P HY C++D+ R
Sbjct: 560 EMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRA 619
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +EEA IK M EPN+VIW+ +A CR GN+E+ +AAE++ L P+ SY +L
Sbjct: 620 GLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLS 679
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ SAGRW D+A V+ +E+ L + S I+I+ K + F D HP+ +I +LD
Sbjct: 680 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLD 739
Query: 659 ELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTT 713
EL ++A G+ S L D +E ++ HSEKLA+AFGL+++ + I +VK+
Sbjct: 740 ELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLR 799
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C CH+F K + + REII+RD+ R H G C+C DF
Sbjct: 800 VCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 222/466 (47%), Gaps = 28/466 (6%)
Query: 63 LSVLTEGPKV-----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
L++ T P + +T + S L+ C K++ ++ H + K G D +T LV
Sbjct: 15 LAISTSKPSLPNQSKRTKATPSSLKNC---KTIDELKMFHLSLTKQGLDDDVSAITKLVA 71
Query: 118 VYGKCGNMEE---AQKVFDNLPRINVV-SWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+ G E A++VF+N + SLI GY + + AI +F+ M+ +G P
Sbjct: 72 RSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISP 131
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T L+ C+ G QIH ++K D V NSL Y+ CG L+ A K F
Sbjct: 132 DKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVF 191
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSL 292
+ + E+NV+SWT++I A + F +M+ E + PN T+ + S C + L
Sbjct: 192 DEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDL 251
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
G +V+ G N + ++++ +Y+KC +D A++LFD NL NAM + +
Sbjct: 252 ETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNY 311
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ L K EAL + + + SG++PD + S ++ CS+L + G+ H
Sbjct: 312 VR-QGLTK----------EALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHG 360
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L+ GF S + AL++MY KC R + A R+F MS +T+++W S++ G+ +
Sbjct: 361 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDA 420
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
A + F M N V++ ++A M EA+ F MQ +
Sbjct: 421 AWETFNTM----PEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQ 462
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 223/457 (48%), Gaps = 34/457 (7%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL----CSLYSTCGSLNSAIKAF-N 234
++L C +++ + K H + K +DD S L C L T SL+ A + F N
Sbjct: 36 SSLKNCKTIDEL---KMFHLSLTKQGLDDDVSAITKLVARSCEL-GTRESLSFAKEVFEN 91
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++I +G + + F +M++ GI P+++T SVC
Sbjct: 92 GESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGN 151
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H L IK+ YA +L V+NS+++ Y +CG +D A+K+FD MS N+V+W +MI G+A+
Sbjct: 152 GIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYAR 211
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ AKD A+ +F ++ + P+ T +++ C++L LE GE+++
Sbjct: 212 -REFAKD----------AVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDF 260
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+G + ++ +ALV+MY KC I+ A R+F E L +M + + L+ +A
Sbjct: 261 IRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEA 320
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY--MC- 530
L + M+ +G+RP++++ + A+++CS + + Y ++ + + +C
Sbjct: 321 LGVLNLMMDSGIRPDRISMLSAISSCSQLRNI-----LWGKSCHGYVLRNGFESWDNICN 375
Query: 531 -LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
LIDM+++ + AF +M V W+ +AG +G ++ A E + K
Sbjct: 376 ALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYIENGEVDA---AWETFNTMPEK 431
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
+ S+ ++ V +E+ V + + ++ D
Sbjct: 432 NIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVD 468
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 15/274 (5%)
Query: 4 VPWAAAAACTLETKSRQPS-SSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEA 62
V W + A +E + + T+ +KN VS+ S L+Q N E + + ++
Sbjct: 403 VTWNSIVAGYIENGEVDAAWETFNTMPEKN-IVSWNTIISALVQENMYEEAIEVFHYMQS 461
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
E V + +S+ C + +L A+ I+ +I K D + T LV+++ +C
Sbjct: 462 ----QECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRC 517
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G+ E A +F++L +V +WT+ I E AI +F +M+E G P V AL
Sbjct: 518 GDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGAL 577
Query: 183 TACSSLESIRLGKQIHAYVVKYQ--TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REK 239
TAC ++ GK+I + K + +D G + L G L A++ + E
Sbjct: 578 TACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYG-CMVDLLGRAGLLEEALQLIKDMPTEP 636
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N + W +++ AC VQG + +E IQ
Sbjct: 637 NDVIWNSLLAAC-----RVQGNVEMAAFAAEKIQ 665
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 348/657 (52%), Gaps = 57/657 (8%)
Query: 144 TSLISGYVQNSQPELAIHVF---------LDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
T+L+ + + + AIH+ L +L + P+ T + +C ++ G
Sbjct: 30 TTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQG 89
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K++H ++ + N L +Y+ C SL + K F+ + E+++ SW +I +
Sbjct: 90 KKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKM 149
Query: 255 GEAVQGLRFFSKM--------------------------------LSEGIQPNEFTLTSI 282
G + F KM S+ + N+FT++S
Sbjct: 150 GLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSA 209
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+ + LR+G ++H ++ G S+ V +++ +Y KCG ++EA+ +FD M ++
Sbjct: 210 LAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDI 269
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
VTW AMI + Q E +F+ L SG++P+ +TFS +L C+
Sbjct: 270 VTWTAMIDRYFQ-----------DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQT 318
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
+ E G+++H + GF +ALV+MY KCG + A RVF E L SWTS+I
Sbjct: 319 SEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIA 378
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G+A + +A++ FE ++ +G +P+ +TFVG L+AC++AG+V + L YF ++++Y +
Sbjct: 379 GYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLT 438
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
DHY C+ID+ R G +EA + I KM +P++ +W+ + GCR HGN++L AAE
Sbjct: 439 HTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEA 498
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
L +++P++ +Y L +I+ +AG W +VA ++ + + + SWI IK V+ F
Sbjct: 499 LFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLV 558
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL 697
D HP+S EI + L +L ++ K G+ +F L D +E YHSEKLA+AFG+
Sbjct: 559 GDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGI 618
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++TP +PI V K+ C DCH IK I+ +T R+IIVRDS R H F +GHC+CRD+
Sbjct: 619 ISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDY 675
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 244/489 (49%), Gaps = 58/489 (11%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
+EAL +L + K S Y +L+Q C+ + L + +H HI +G F++ L+ +
Sbjct: 55 LKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEM 114
Query: 119 YGKC-------------------------------GNMEEAQKVFDNLPRINVVSWTSLI 147
Y KC G ++EA+ +FD +P + SWT++I
Sbjct: 115 YAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMI 174
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
SGYV++ +P A+ +F M + N +N T+ +AL A +++ +R+GK+IH Y+++
Sbjct: 175 SGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGL 234
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D V ++L +Y CGS+ A F+++ ++++++WT +I ++G +G F+
Sbjct: 235 DSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFAD 294
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
+L GI+PNEFT + + + C S +G +VH ++G+ ++++++Y KCG
Sbjct: 295 LLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGN 354
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMK 385
+ A+++F +L +W ++IAG+AQ NG EA+ F L SG +
Sbjct: 355 MVSAERVFKETPQPDLFSWTSLIAGYAQ------------NGQPDEAIRYFELLVKSGTQ 402
Query: 386 PDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD TF +L+ C+ +++G + H++ + G ++++ + G+ + A
Sbjct: 403 PDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAEN 462
Query: 445 VFVEMSTRT-LISWTSMITG---FANHSLSHQALQ-LFEDMLLAGVRP-NQVTFVGALAA 498
+ +MS + W S++ G N L+ +A + LFE + P N T+V
Sbjct: 463 IISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE------IEPENPATYVTLANI 516
Query: 499 CSNAGMVYE 507
+ AGM E
Sbjct: 517 YATAGMWSE 525
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 2/203 (0%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
R GF +L G + ++ +L C N+ S + +H ++ + G F +
Sbjct: 285 RKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASA 344
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCGNM A++VF P+ ++ SWTSLI+GY QN QP+ AI F ++++G P
Sbjct: 345 LVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPD 404
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
++T L+AC+ + G H+ +Y + L + G + A
Sbjct: 405 HITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENII 464
Query: 234 NRIREK-NVMSWTTVIGACGENG 255
+++ K + W +++G C +G
Sbjct: 465 SKMSMKPDKFLWASLLGGCRIHG 487
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 356/651 (54%), Gaps = 19/651 (2%)
Query: 57 LGF-QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
+GF +EAL + L G + ++ +L+ C +HAH+++ G + V
Sbjct: 175 VGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDV 234
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+ LV +Y KCG++ A+KVFD + + +SW ++I+G+ +N + E + +FL MLE
Sbjct: 235 LNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEV 294
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P +T+ + A L + K++H + VK D + NSL +Y++ G + A K
Sbjct: 295 QPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGK 354
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+R+ K+ MSWT +I +NG + L ++ M + P++ T+ S + C +
Sbjct: 355 IFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGR 414
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L VG ++H L G+ + V N+++ +Y K +D+A ++F M+ ++V+W++MIAG
Sbjct: 415 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 474
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
++ EAL F + +KP+ TF + L+ C+ AL G++IH
Sbjct: 475 -----------FCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIH 522
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A L+ G S+ V AL+++Y KCG+ A F S + ++SW M++GF H L
Sbjct: 523 AYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGD 582
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
AL LF M+ G P++VTFV L ACS AGMV + F MM +++ I P + HY C+
Sbjct: 583 IALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACM 642
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ R+G + EA++ I +M +P+ +W + GCR H ++ELG AA+ +L+L+P D
Sbjct: 643 VDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDV 702
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+ +L D++ AG+W VA V+ RE+ L + + SW+ +K ++F +D HPQ
Sbjct: 703 AYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIK 762
Query: 652 EIFKVLDELVEKAKCFGYKQQESFELTD--EESASVYHSEKLAIAFGLLNT 700
EI VL + E+ K G+ ES E + E+ HSE+LA+AFGL+NT
Sbjct: 763 EINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGHSERLAVAFGLINT 813
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 269/532 (50%), Gaps = 25/532 (4%)
Query: 61 EALSVLTEGPKV-QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVN 117
+AL +L P+ +YV+L + C R+++ + A H F + +++
Sbjct: 82 QALWLLESSPEPPDEGAYVALFRLCEWRRAVDAG--MRACARADAEHPSFGLRLGNAMLS 139
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+ + G + A +VF +P +V SW ++ GY + E A+ ++ ML AG P T
Sbjct: 140 MLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYT 199
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L C + R+G+++HA+V+++ D+ V N+L ++Y+ CG + +A K F+ +
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ +SW +I EN E GL F ML +QPN T+TS++ G + + +
Sbjct: 260 VTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H +K G+A ++ NS++ +Y G + +A K+F M + ++W AMI+G+ +
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK--- 376
Query: 358 LAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
NG +AL +++ + + PD T +S L C+ L L+ G ++H L
Sbjct: 377 ---------NGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQN 427
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF+ VVV AL+ MY K I++A VF M+ + ++SW+SMI GF + S +AL
Sbjct: 428 KGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYY 487
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDM 534
F M L V+PN VTF+ AL+AC+ G + E+ + + Y+ L+D+
Sbjct: 488 FRYM-LGHVKPNSVTFIAALSACAATGALRSGK---EIHAYVLRCGIGSEGYVPNALLDL 543
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+V+ G A+ + E + V W++ ++G HG ++ Q++++
Sbjct: 544 YVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEM 594
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/694 (32%), Positives = 363/694 (52%), Gaps = 23/694 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V++L C + + + +H VK ++ + L+++Y KCG + AQ
Sbjct: 40 PDVAT--LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 97
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSS 187
+F NVVSW +++ G+ V ML G VT+ A+ C
Sbjct: 98 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 157
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ K++H Y +K + + V N+ + Y+ CGSL+ A + F+ IR K V SW +
Sbjct: 158 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 217
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG ++ + L +M G+ P+ FT+ S+ S C + SLR+G +VH I+
Sbjct: 218 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 277
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+L V S++ LY+ CG + Q LFD M +LV+WN +I G+ Q N
Sbjct: 278 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ------------N 325
Query: 368 GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G + AL +F ++ G++ + + CS L +L G + HA LK D +
Sbjct: 326 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 385
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L++MY K G I ++S+VF + ++ SW +MI G+ H L+ +A++LFE+M G
Sbjct: 386 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 445
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ +TF+G L AC+++G+++E L Y + M+ + +KP + HY C+IDM R G +++A
Sbjct: 446 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 505
Query: 547 FI-KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++M E + IW ++ CR H N+E+G A +L +L+P+ E+Y +L +++ G
Sbjct: 506 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 565
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+WEDV V+ E L + SWI + KV+SF + EI + L K
Sbjct: 566 KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS 625
Query: 666 CFGYKQQE---SFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ +L++EE HSEKLA+ +GL+ T + I V K+ +C DCHN
Sbjct: 626 KMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHN 685
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ + REI+VRD+KR H F NG C+C D+
Sbjct: 686 AAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDY 719
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 211/444 (47%), Gaps = 29/444 (6%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN----YPTNVTLGTALTACSSLESIRLG 194
N VSW S+I + N E + + +M+E P TL T L C+ I LG
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K +H + VK + + + + N+L +YS CG + +A F KNV+SW T++G
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121
Query: 255 GEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G+ +ML+ G ++ +E T+ + VC L ++H +K + N
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL 181
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V N+ + Y KCG + AQ++F G+ + +WNA+I GHAQ D + L AH
Sbjct: 182 VANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAH------ 234
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++ SG+ PD +T S+L+ CS+L +L G+++H ++ D+ V +++++
Sbjct: 235 ----LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 290
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y CG + +F M ++L+SW ++ITG+ + +AL +F M+L G++ ++
Sbjct: 291 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 350
Query: 493 VGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ ACS G A +++ + I LIDM+ + G I ++
Sbjct: 351 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA------CSLIDMYAKNGSITQSSKV 404
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHG 571
+ E + W+ I G HG
Sbjct: 405 FNGLK-EKSTASWNAMIMGYGIHG 427
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 209/414 (50%), Gaps = 18/414 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E K + ++ + C + L + + +H + +K + V V Y KCG++
Sbjct: 139 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 198
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VF + V SW +LI G+ Q++ P L++ L M +G P + T+ + L+ACS
Sbjct: 199 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 258
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L+S+RLGK++H ++++ E D V S+ SLY CG L + F+ + +K+++SW TV
Sbjct: 259 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 318
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L F +M+ GIQ ++ + C + SLR+G + H+ +K
Sbjct: 319 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 378
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + S++ +Y K G + ++ K+F+G+ + +WNAMI G+ H
Sbjct: 379 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-----------IHG 427
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVG 426
EA+ +F ++ +G PD TF +LT C+ + +G + + G ++
Sbjct: 428 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 487
Query: 427 TALVNMYKKCGRIERASRVFV-EMSTRTLIS-WTSMITGFANHSLSHQALQLFE 478
+++M + G++++A RV EMS + W S+++ HQ L++ E
Sbjct: 488 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS----CRIHQNLEMGE 537
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 127/268 (47%), Gaps = 17/268 (6%)
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSE----GIQPNEFTLTSISSVCGTMLSLRV 294
+N +SW ++I +NG + + +M+ E P+ TL ++ VC + +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G VH +KL L + N++M +Y KCG + AQ +F ++ N+V+WN M+ G
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG--- 117
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSG--MKPDLYTFSSILTICSRLVALEQGEQIHA 412
SA + ++ + G +K D T + + +C L +++H
Sbjct: 118 --------FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHC 169
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+LK F+ + +V A V Y KCG + A RVF + ++T+ SW ++I G A +
Sbjct: 170 YSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRL 229
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACS 500
+L M ++G+ P+ T L+ACS
Sbjct: 230 SLDAHLQMKISGLLPDSFTVCSLLSACS 257
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLL----AGVRPNQVTFVGALAACSNAGMVYE 507
R +SW SMI F+++ S ++ L +M+ P+ T V L C+ +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 508 ALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
G + +K +D + L+DM+ + GCI A I KM+ N V W+
Sbjct: 61 GKGV-----HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTM 114
Query: 564 IAGCRRHGNMELGFYAAEQLL 584
+ G G+ F Q+L
Sbjct: 115 VGGFSAEGDTHGTFDVLRQML 135
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 327/591 (55%), Gaps = 13/591 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + L + IHA++++ G+ D V+ L++ Y KC ++ +K+FD +
Sbjct: 235 SVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK 294
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
N++SWT++ISGY+QNS A+ +F +M G P + LT+C S E++ G+Q+H
Sbjct: 295 NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVH 354
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AY +K E D V N L +Y+ L A K F+ + E+NV+S+ +I +
Sbjct: 355 AYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS 414
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F +M P+ T S+ V ++ +L + Q+H L IK G + +L ++++
Sbjct: 415 EALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALI 474
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC V +A+ +F+ M+ ++V WNAM G+ Q H EAL ++S
Sbjct: 475 DVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ-----------HLENEEALKLYST 523
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
L S KP+ +TF++++T S L +L G+Q H +K G V ALV+MY KCG
Sbjct: 524 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 583
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A ++F R ++ W SMI+ A H + +AL +F +M+ G++PN VTFV L+A
Sbjct: 584 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 643
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+AG V + L +F M + IKP +HY C++ + R G + EA +FI+KM EP +
Sbjct: 644 CSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 702
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR GN+ELG YAAE + PKD SY +L +IF S G W DV V++
Sbjct: 703 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 762
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ + SWI + +KV F D H + A+I VLD L++ K GY
Sbjct: 763 SSEVVKEPGRSWIEVNNKVNVFIARDTTH-READIGSVLDILIQHIKGAGY 812
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 291/534 (54%), Gaps = 18/534 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C + +H +V++G QD +V T L++ Y K GN+EEA+ VFD L
Sbjct: 134 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK 193
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V+WT++I+GY + + +++ +F M E P + + L+ACS LE + GKQIH
Sbjct: 194 TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 253
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AYV++ TE D SV N L Y+ C + + K F+++ KN++SWTT+I +N
Sbjct: 254 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 313
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ ++ F +M G +P+ F TS+ + CG+ +L G QVH+ IK S+ V+N ++
Sbjct: 314 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLI 373
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K L+ +A+K+FD M+ N++++NAMI G++ L +EAL +F +
Sbjct: 374 DMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKL-----------SEALELFHE 422
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ P L TF S+L + + L ALE +QIH L +K G D+ G+AL+++Y KC
Sbjct: 423 MRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSY 482
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A VF EM+ + ++ W +M G+ H + +AL+L+ + + +PN+ TF + A
Sbjct: 483 VKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITA 542
Query: 499 CSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
SN A + + + ++++ P + + L+DM+ + G IEEA + +
Sbjct: 543 ASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR-DV 599
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDIFVSAGRWED 609
V W+ I+ +HG E +++K ++P + ++ +L AGR ED
Sbjct: 600 VCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGRVED 652
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 162/549 (29%), Positives = 286/549 (52%), Gaps = 35/549 (6%)
Query: 58 GFQEALSVLTEGPKVQTSS-------YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
G Q+ + E P +Q + + +LLQ ++R + + +IIH I+ +G D F
Sbjct: 4 GMQKTKDMEDENPCLQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTF 63
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEA 169
+ L+NV K ++ A+ VFD +P N+++W+S++S Y Q E A+ VF+D+ ++
Sbjct: 64 LANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKS 123
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G +P L + + AC+ L + G Q+H +VV+ + D VG SL YS G++ A
Sbjct: 124 GEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA 183
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+++ EK ++WTT+I + G + L F++M + P+ + ++S+ S C +
Sbjct: 184 RLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSML 243
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L G Q+H+ ++ G ++ V N ++ Y KC V +KLFD M N+++W MI
Sbjct: 244 EFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMI 303
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G+ Q ++ EA+ +F ++N G KPD + +S+LT C ALEQG Q
Sbjct: 304 SGYMQ-----------NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQ 352
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+HA T+K SD V L++MY K + A +VF M+ + +IS+ +MI G+++
Sbjct: 353 VHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEK 412
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY----KIKPVM 525
+AL+LF +M + P+ +TFV L V +L E+ ++ + K +
Sbjct: 413 LSEALELFHEMRVRLFPPSLLTFVSLLG-------VSASLFALELSKQIHGLIIKFGVSL 465
Query: 526 DHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAE 581
D + LID++ + +++A ++M+ E + V+W+ G +H E L Y+
Sbjct: 466 DLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQHLENEEALKLYSTL 524
Query: 582 QLLKLKPKD 590
Q + KP +
Sbjct: 525 QFSRQKPNE 533
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 118/211 (55%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++VSLL + +L ++ IH I+K G D F + L++VY KC +++A+ VF+ +
Sbjct: 434 TFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 493
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
++V W ++ GY Q+ + E A+ ++ + + P T +TA S+L S+R G+
Sbjct: 494 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 553
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q H +VK + V N+L +Y+ CGS+ A K FN ++V+ W ++I ++G
Sbjct: 554 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 613
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
EA + L F +M+ EGIQPN T ++ S C
Sbjct: 614 EAEEALGMFREMMKEGIQPNYVTFVAVLSAC 644
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ N SL + + H +VK G FV LV++Y KCG++EEA+K+F++
Sbjct: 535 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 594
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VV W S+IS + Q+ + E A+ +F +M++ G P VT L+ACS + G
Sbjct: 595 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGL 654
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
+ + + T + SL G L A + ++ E + W +++ AC
Sbjct: 655 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSAC 711
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/685 (31%), Positives = 362/685 (52%), Gaps = 21/685 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y + C N K L ++HAH + G + FV + LV++Y K + A+KVFD +
Sbjct: 113 TYAFAVAACSNDKHLM---LLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGM 169
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P + V W ++I+G V+N + +I +F +M+ G + T+ L A + L+ +++G
Sbjct: 170 PERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGM 229
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
I +K V L SLYS CG +N+A F RI +++++ +I NG
Sbjct: 230 GIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANG 289
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
++ F ++L G + + T+ + + L + +H +K G N V
Sbjct: 290 GTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVST 349
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALS 374
+ +Y K +D A+ LFD +V WNAMI+G+ Q NG TE A+S
Sbjct: 350 AFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQ------------NGSTETAIS 397
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ + P+ T ++IL+ C++L +L G+ +H L ++ V TALV+MY
Sbjct: 398 LFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYA 457
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I A ++F MS + ++W +MI G+ H H+AL+L+ +ML G P+ VTF+
Sbjct: 458 KCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLS 517
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+AG+V E F M +Y+I+P+++HY C++D+ R G +E+A +FIKKM E
Sbjct: 518 VLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVE 577
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P +W + C H + ++ A+E+L +L P Y +L +I+ + A ++
Sbjct: 578 PGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIR 637
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+ ++ KL+++ + I + + F D H + +I+ L++L K + GY+ +
Sbjct: 638 QVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETV 697
Query: 675 FELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L D +E A HSEKLAIAFGL+ T + I ++K+ +C DCH K I+ +T
Sbjct: 698 PALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKIT 757
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R I+VRD+ R H F +G C+C D+
Sbjct: 758 ERVIVVRDANRFHHFKDGICSCGDY 782
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 16/401 (3%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++ F +++ + E G +V +S+ ++L + L I +K G
Sbjct: 185 VKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCD 244
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+V+T L+++Y KCG++ A+ +F + R +++++ ++ISG+ N E ++ +F ++L +
Sbjct: 245 YVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFS 304
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G ++ T+ + S + L IH + VK + +V + ++Y+ ++ A
Sbjct: 305 GERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA 364
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+ EK V++W +I +NG + F +M+ PN T+T+I S C +
Sbjct: 365 RHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQL 424
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
SL G VH L N+ V +++ +Y KCG + EA +LFD MS N VTWN MI
Sbjct: 425 GSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMI 484
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G+ H G EAL +++++ G P TF S+L CS + +GE+
Sbjct: 485 FGYG-----------LHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEE 533
Query: 410 I-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
I H + K + +V++ + G++E+A +M
Sbjct: 534 IFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKM 574
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 131/292 (44%), Gaps = 21/292 (7%)
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
AQ H+ I GY +L + A+ LF + ++ +N ++ G
Sbjct: 29 AQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRG---- 84
Query: 356 MDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S ++ + ++S+++ L ++ + PD +T++ + CS L +HA +
Sbjct: 85 -------FSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHS 134
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ G+ S+V VG+ALV++Y K R+ A +VF M R + W +MI G + ++
Sbjct: 135 IIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSI 194
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LI 532
QLF +M+ GVR + T L A + + +G + KI Y+ LI
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMG---IQCLALKIGFGFCDYVLTGLI 251
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
++ + G + A ++++ P+ + ++ I+G +G E +LL
Sbjct: 252 SLYSKCGDVNTARLLFRRIN-RPDLIAYNAMISGFTANGGTECSVKLFRELL 302
>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Cucumis sativus]
Length = 598
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 338/571 (59%), Gaps = 17/571 (2%)
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S+R G Q+HA+++K+ + V ++L +LYS +++ F+ +K+ +W++VI
Sbjct: 39 RSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVI 98
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +N + L+FF +ML++G++P++ S + CG + VG VH L +K GY
Sbjct: 99 SAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYY 158
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++ V +S++ +Y KCG + +A+ LFD M N+V+W+ MI G+AQ+ D
Sbjct: 159 CDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD----------- 207
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
G EAL++F + + + +TFSS++ +CS LE G+ IH L LK F S VG+A
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSA 267
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y KCG IE A +VF E+ TR L W SM+ A H+ + + LFE+M G++PN
Sbjct: 268 LISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++F+ L ACS+AG+V + YF +M ++Y I+P +HY L+D+ R G ++EA I
Sbjct: 328 FISFLSVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVI 386
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K+M P E +W + GCR H + E+ + A+++L++ + +L + + +AGR+E
Sbjct: 387 KQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYE 446
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+ A ++ + R+ + + SW+ +KV++F D H + EI++ L+EL E+ + G
Sbjct: 447 EAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAG 506
Query: 669 YKQQESFELT----DEESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y SF L +E++ ++ YHSE+LAIAFGL+ P PI V+K+ +C DCH IK
Sbjct: 507 YVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIK 566
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ R +IVRD+ R H+F +G C+C D+
Sbjct: 567 FMSKCCGRVLIVRDNNRFHRFEDGKCSCGDY 597
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 199/396 (50%), Gaps = 12/396 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL +SL +HAHI+K G V L+N+Y K + +VFD P+
Sbjct: 30 NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK 89
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ +W+S+IS + QN P LA+ F ML G P + +A AC L +GK +H
Sbjct: 90 SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
VK D VG+SL +Y+ CG + A F+ + E+NV+SW+ +I + + V
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F + L E + N+FT +S+ VC + L +G +H L +K+ + S+ V ++++
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALI 269
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY KCG+++ A ++FD + NL WN+M+ AQ H +F +
Sbjct: 270 SLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ-----------HAHTQRVFGLFEE 318
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + GMKP+ +F S+L CS +E+G + +L G + +LV++ + G+
Sbjct: 319 MGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGK 378
Query: 439 IERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQA 473
++ A V +M R S W +++TG H + A
Sbjct: 379 LQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 162/354 (45%), Gaps = 8/354 (2%)
Query: 1 MASVPWAAAAACTLETKSRQPSSSLATLKD--KNHTVSYQRSGSKLIQLNGNSEPVRSLG 58
+ ++P + L +K++ P SL + K + ++ S Q N P+ +L
Sbjct: 56 LQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ---NEAPLLALQ 112
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F + L +G + Y S + C + + +H VKTG + D FV + LV++
Sbjct: 113 FFRRM--LNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDM 170
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG + +A+ +FD +P NVVSW+ +I GY Q A+ +F L + T
Sbjct: 171 YAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTF 230
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ + CSS + LGK IH +K + + VG++L SLYS CG + A + F+ I
Sbjct: 231 SSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPT 290
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N+ W +++ AC ++ + F +M + G++PN + S+ C + G +
Sbjct: 291 RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREY 350
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
SL G S++ L + G + EA + M W A++ G
Sbjct: 351 FSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
LN + + + ++L +R +L QG Q+HA LK G + +V L+N+Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ +VF E ++ +W+S+I+ FA + ALQ F ML GVRP+ + A A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 499 CSNAGMVYEALGYFEM--MQKEYKIKPVMDHYMC-------LIDMFVRLGCIEEAFDFIK 549
C G+ + K V Y C L+DM+ + G I +A
Sbjct: 136 C----------GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFD 185
Query: 550 KMDFEPNEVIWSVFIAG 566
+M E N V WS I G
Sbjct: 186 EMP-ERNVVSWSGMIYG 201
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/694 (32%), Positives = 363/694 (52%), Gaps = 23/694 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V++L C + + + +H VK ++ + L+++Y KCG + AQ
Sbjct: 290 PDVAT--LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSS 187
+F NVVSW +++ G+ V ML G VT+ A+ C
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ K++H Y +K + + V N+ + Y+ CGSL+ A + F+ IR K V SW +
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG ++ + L +M G+ P+ FT+ S+ S C + SLR+G +VH I+
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+L V S++ LY+ CG + Q LFD M +LV+WN +I G+ Q N
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ------------N 575
Query: 368 GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G + AL +F ++ G++ + + CS L +L G + HA LK D +
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L++MY K G I ++S+VF + ++ SW +MI G+ H L+ +A++LFE+M G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ +TF+G L AC+++G+++E L Y + M+ + +KP + HY C+IDM R G +++A
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 547 FI-KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++M E + IW ++ CR H N+E+G A +L +L+P+ E+Y +L +++ G
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 815
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+WEDV V+ E L + SWI + KV+SF + EI + L K
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS 875
Query: 666 CFGYKQQE---SFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ +L++EE HSEKLA+ +GL+ T + I V K+ +C DCHN
Sbjct: 876 KMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHN 935
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ + REI+VRD+KR H F NG C+C D+
Sbjct: 936 AAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDY 969
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 245/507 (48%), Gaps = 29/507 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y +++ C + +H +VKTG +D FV LV+ YG G + +A ++FD +
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN----YPTNVTLGTALTACSSLESI 191
P N+VSW S+I + N E + + +M+E P TL T L C+ I
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H + VK + + + + N+L +YS CG + +A F KNV+SW T++G
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 252 GENGEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
G+ +ML+ G ++ +E T+ + VC L ++H +K +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V N+ + Y KCG + AQ++F G+ + +WNA+I GHAQ D + L AH
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAH--- 484
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
++ SG+ PD +T S+L+ CS+L +L G+++H ++ D+ V ++
Sbjct: 485 -------LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 537
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y CG + +F M ++L+SW ++ITG+ + +AL +F M+L G++
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 490 VTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
++ + ACS G A +++ + I LIDM+ + G I ++
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA------CSLIDMYAKNGSITQS 651
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ E + W+ I G HG
Sbjct: 652 SKVFNGLK-EKSTASWNAMIMGYGIHG 677
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 19/429 (4%)
Query: 80 LLQECVNRKSLSNAEIIHAHIV-KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ RK + IH + T D + T ++ +Y CG+ ++++ VFD L
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W ++IS Y +N + + F++M+ + P + T + AC+ + + +G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H VVK +D VGN+L S Y T G + A++ F+ + E+N++SW ++I +NG +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 258 VQGLRFFSKMLSE----GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ +M+ E P+ TL ++ VC + +G VH +KL L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N++M +Y KCG + AQ +F ++ N+V+WN M+ G SA
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG-----------FSAEGDTHGTF 378
Query: 374 SIFSKLNSSG--MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+ ++ + G +K D T + + +C L +++H +LK F+ + +V A V
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG + A RVF + ++T+ SW ++I G A + +L M ++G+ P+ T
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 492 FVGALAACS 500
L+ACS
Sbjct: 499 VCSLLSACS 507
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 209/414 (50%), Gaps = 18/414 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E K + ++ + C + L + + +H + +K + V V Y KCG++
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VF + V SW +LI G+ Q++ P L++ L M +G P + T+ + L+ACS
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L+S+RLGK++H ++++ E D V S+ SLY CG L + F+ + +K+++SW TV
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L F +M+ GIQ ++ + C + SLR+G + H+ +K
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + S++ +Y K G + ++ K+F+G+ + +WNAMI G+ H
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-----------IHG 677
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVG 426
EA+ +F ++ +G PD TF +LT C+ + +G + + G ++
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 427 TALVNMYKKCGRIERASRVFV-EMSTRTLIS-WTSMITGFANHSLSHQALQLFE 478
+++M + G++++A RV EMS + W S+++ HQ L++ E
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS----CRIHQNLEMGE 787
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 21/332 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
LG L A + I +G++IH V + +D + + ++Y+ CGS + + F+
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRV 294
+R KN+ W VI + N + L F +M+S + P+ FT + C M + +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA---- 350
G VH L +K G ++ V N+++ Y G V +A +LFD M NLV+WN+MI
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 351 -GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G ++ L ++ NG PD+ T ++L +C+R + G+
Sbjct: 266 NGFSEESFLLLGEMMEENG------------DGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H +K ++V+ AL++MY KCG I A +F + + ++SW +M+ GF+
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 470 SHQALQLFEDMLLAG--VRPNQVTFVGALAAC 499
+H + ML G V+ ++VT + A+ C
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNS------IMYLYLKCGLVDEAQKLFDGMSHV 340
G + +G ++H L + + R+RN I+ +Y CG D+++ +FD +
Sbjct: 95 GKRKDIEMGRKIHQL-----VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICS 399
NL WNA+I+ ++ +++L E L F ++ +++ + PD +T+ ++ C+
Sbjct: 150 NLFQWNAVISSYS------RNELY-----DEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
+ + G +H L +KTG + DV VG ALV+ Y G + A ++F M R L+SW S
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 460 MITGFANHSLSHQALQLFEDMLL----AGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
MI F+++ S ++ L +M+ P+ T V L C+ + G
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV---- 314
Query: 516 QKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ +K +D + L+DM+ + GCI A I KM+ N V W+ + G G
Sbjct: 315 -HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 572 NMELGFYAAEQLL 584
+ F Q+L
Sbjct: 373 DTHGTFDVLRQML 385
>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
Length = 923
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/690 (30%), Positives = 363/690 (52%), Gaps = 24/690 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V+ L C + + S A IHA + D V T LVN+YGK G +++A+++F+ +
Sbjct: 244 VAALNACCHSRDFSEALRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQE 303
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+VVSW ++++ N + A F +ML G P+ +T L AC ++ G +
Sbjct: 304 RDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFV 363
Query: 198 HAYVVKYQT---EDDTSVGNSLCSLYSTCGSLNSAIKA---FNRIREK-NVMSWTTVIGA 250
V+ D +G ++ ++YS C S SA + + R++ ++M W TV+
Sbjct: 364 KTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSL 423
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
EN + + F ML G+ + +L ++ + CG+ SL G +HSL +
Sbjct: 424 YVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRK 483
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V+N+++ +Y + G +++A+++FD M+ N+++W AM+ H+Q+
Sbjct: 484 TPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQL-----------GLNR 532
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL IF + G+ P+ TF+++L C L ++ + + A +TGF +V V L+
Sbjct: 533 EALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLL 592
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
KCG +E + F M+ + +SW + I A H + ++LF+ M L G+ V
Sbjct: 593 CTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSV 652
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
T +G L++CS+AG+V + YF M +Y +HY C+ID+ R G +E A +F+K+
Sbjct: 653 TLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKR 712
Query: 551 MDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
+ F V W + GC+ HG++E G A +++L L P Y ++ +++ AG+W +
Sbjct: 713 LPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPE 772
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
A V+ E + SWI +K +++ F+ D HP+S+EI + L+ L E+ K G+
Sbjct: 773 AAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGF 832
Query: 670 K---QQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
+ ++L +E S+ HSEKLAIAFGL++T P+ ++K+ +C DCH+ K
Sbjct: 833 VCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKF 892
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ L REI+VRD+ R H F G C+C DF
Sbjct: 893 ISGLVGREIVVRDAYRFHHFRGGACSCEDF 922
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 248/514 (48%), Gaps = 42/514 (8%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+YV++L C + + + I A + GS + D V T ++N YGKCG+++ A VFD
Sbjct: 143 TYVAVLGACGHPWEV---DTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDG 199
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + W ++IS V + Q + A+ +F M G P T AL AC
Sbjct: 200 ILVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEA 259
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+IHA+ + + DT V +L ++Y G ++ A + F RI+E++V+SW ++ A N
Sbjct: 260 LRIHAFARELAGDADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACN 319
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG---YASNL 311
G + + F +ML G P+ T +I + C L+ G V +L ++ G + ++
Sbjct: 320 GFHDKAFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDV 379
Query: 312 RVRNSIMYLYLKCGLVDEAQK----LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ +IM +Y +C A L +++ WN +++ + +
Sbjct: 380 VMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQF--------- 430
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA +IF + G+ D + ++ C +LE+G+ IH+L ++ V
Sbjct: 431 --EEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQN 488
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV MY + G +E A +F M+TR +ISWT+M+ + L+ +AL++F +LL GV P
Sbjct: 489 ALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAP 548
Query: 488 NQVTFVGALAACSN------AGMVYEAL---GYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
N+VTF L AC N A +V L G+F ++ V + +C + +
Sbjct: 549 NEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVE-------VANGLLCTLG---KC 598
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
G +EE +F + M + N+V W+ IA +HGN
Sbjct: 599 GSLEEVANFFQVMAVK-NQVSWNTAIAANAQHGN 631
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 239/507 (47%), Gaps = 38/507 (7%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
S++ +L+ +C L+ IH I++ G F+ L+ +Y KCG+ EEA+ VF
Sbjct: 40 ASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQ 99
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ +VV+WTSLI ++ P+ A H+F +M G P +VT L AC +
Sbjct: 100 GIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV-- 157
Query: 194 GKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
I A V + E D V ++ + Y CG L+SA F+ I ++ W +I
Sbjct: 158 -DTIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLV 216
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+ + + L F +M G+ PN+ T + + C ++H+ +L ++
Sbjct: 217 AHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDADTV 276
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
V+ +++ +Y K G VD+A+++F+ + ++V+WNAM+ +A NG +
Sbjct: 277 VQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANAC------------NGFHDK 324
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF---LSDVVVGTA 428
A F ++ G P T+ +IL C L+ G+ + L ++ G DVV+GTA
Sbjct: 325 AFKCFREMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTA 384
Query: 429 LVNMYKKCGRIERA--SRVFVEMSTR--TLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
++NMY +C + A S + +E +++ W ++++ + + +A +F MLL G
Sbjct: 385 IMNMYSRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGG 444
Query: 485 VRPNQVTFVGALAACSNAG------MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
V + V+ + AC ++ ++ L E+ +K PV + L+ M+ RL
Sbjct: 445 VTIDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRK----TPVQN---ALVTMYARL 497
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIA 565
G +E+A + M N + W+ +
Sbjct: 498 GSLEDAREIFDAMTTR-NVISWTAMVG 523
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 191/403 (47%), Gaps = 21/403 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTG---SHQDFFVMTFLVNVYGKCGNMEEAQK-- 130
+YV++L C L + + + V+ G D + T ++N+Y +C + + A
Sbjct: 343 TYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSS 402
Query: 131 --VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ + + +++ W +++S YV+N Q E A +F ML G V+L T AC S
Sbjct: 403 LLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSS 462
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S+ GK IH+ + + + T V N+L ++Y+ GSL A + F+ + +NV+SWT ++
Sbjct: 463 ASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMV 522
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G + G + LR F +L EG+ PNE T T++ + CG + S+ V + + G+
Sbjct: 523 GVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFF 582
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N+ V N ++ KCG ++E F M+ N V+WN IA +AQ H
Sbjct: 583 GNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQ-----------HGN 631
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGT 427
G + +F + G+ T +L+ CS + QG + + GF ++ +
Sbjct: 632 GVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYS 691
Query: 428 ALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHS 468
++++ + G +E A + +++ W +++ G H
Sbjct: 692 CVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHG 734
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D TF++++ C+RL L QG +IH L L+ G +G L+ MY KCG E A VF
Sbjct: 39 DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV- 505
+ +++++WTS+I A +A LF +M L GV PN VT+V L AC + V
Sbjct: 99 QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158
Query: 506 -----YEALGYFEM 514
EA G E+
Sbjct: 159 TIRARVEACGSLEL 172
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/692 (31%), Positives = 367/692 (53%), Gaps = 27/692 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
GP SS++ +L L + + ++ ++ +G H+ F+M +N G++ A
Sbjct: 2 GPAFWGSSWMFML--------LKHLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYA 53
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
K F + +++ W ++I GY Q + + I +++DM + +P T L AC
Sbjct: 54 HKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGT 113
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+GKQIH KY + V NSL S+Y+ G ++ A F+++ ++ V+SWT++I
Sbjct: 114 SVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSII 173
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG+ ++ L F +M ++P+ L S+ + + L G +H L KLG
Sbjct: 174 SGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLE 233
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ S+ +Y K GLV+ A+ F+ M NL+ WNAMI+G+A NG
Sbjct: 234 FEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYAN------------NG 281
Query: 369 -GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EA+ +F ++ + ++ D T S + +++ +LE + K+ + D V T
Sbjct: 282 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 341
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
L++MY KCG I A VF ++ + ++ W+ MI G+ H +A+ L+ +M AGV P
Sbjct: 342 GLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCP 401
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N TF+G L AC N+G+V E F +M ++ I+P HY C++D+ R G + +A+DF
Sbjct: 402 NDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDF 460
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I M +P +W ++ C+ H + LG AAEQL L P + Y L +++ SA W
Sbjct: 461 IMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLW 520
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
VA V+ + ++ L++ S I I + +F+ D HP+S EIF+ LD L ++ K
Sbjct: 521 TRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAA 580
Query: 668 GY-KQQESF--ELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY ES +L EE +HSE+LA+A+G+++T + + + K+ C +CH+ I
Sbjct: 581 GYVPHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAI 640
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ L REII+RD+KR H F +G C+C DF
Sbjct: 641 KLISKLVDREIIIRDAKRFHHFKDGVCSCGDF 672
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG E L F+E ++T+ +V + + S + SL A + +I K+
Sbjct: 280 NGYGEEAIKL-FRE---MITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRD 335
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV T L+++Y KCG++ A+ VFD + +VV W+ +I GY + + AI ++ +M
Sbjct: 336 DTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMK 395
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+AG P + T LTAC + ++ G ++ + + E + + L G LN
Sbjct: 396 QAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLN 455
Query: 228 SAIKAFNRIREK-NVMSWTTVIGAC 251
A + K V W ++ AC
Sbjct: 456 QAYDFIMSMPIKPGVSVWGALLSAC 480
>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
Length = 1096
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/688 (32%), Positives = 355/688 (51%), Gaps = 35/688 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++++++ C+ + L AE IHAH+V +G D + LV +YGKCG+++ A +F+NL
Sbjct: 430 TFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENL 489
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VV+W S++S + N E ++ ++ ML G P +T L AC S+ R
Sbjct: 490 KERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVSEAR--- 546
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN-VMSWTTVIGACGEN 254
Y ++ E D + N+ S Y+ CGSL A AF+ I+ KN ++W +I ++
Sbjct: 547 ---RYAATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQH 603
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
GE+ Q L F KM EG++ N T + C ++ L G Q+H+ I L +
Sbjct: 604 GESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHAR-ILLENIHEANLS 662
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y KCG +DEA F M ++++WN MIA +AQ H G +AL
Sbjct: 663 NAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQ-----------HGSGRQALE 711
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL--TLKTGFLSDVVVGTALVNM 432
F +++ G PD T+ + C + +L G+ IH++ T D V TALV M
Sbjct: 712 FFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTM 771
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y +CG + A VF +R L++W+++I A H ++AL LF +M L G +P+ +TF
Sbjct: 772 YARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTF 831
Query: 493 VGALAACSNAGMVYE-ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
+AACS G+V + F+ + + Y + +HY C++++ R G +EEA I+ M
Sbjct: 832 STLVAACSRRGVVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGM 891
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD-CESYAMLLDIFVSAGRWEDV 610
+ + IW +A C R G++E G AA + +L P S AML +++ +AGRWED
Sbjct: 892 PRKASGAIWMALLAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLAELYGAAGRWEDA 951
Query: 611 A-VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
A V K + E SWI + ++V+ F +D Q + K+ EL
Sbjct: 952 ARVRKAVESRNARREPGGRSWIEVNNRVHEFGEDDD-RLQGPRLDKIRGELQR----LSS 1006
Query: 670 KQQESFELTDEESASVY-----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
E + +E+A + HSEK+AI FG+++TP I +VK+ C DCH F K
Sbjct: 1007 LAVEEGGICKDENARAHILGCCHSEKVAIGFGIVSTPAGQLIRIVKNLRACHDCHAFAKF 1066
Query: 725 ITSLTAREIIVRDSKRLHKF-VNGHCTC 751
++ REI VRD LH F NG C+C
Sbjct: 1067 VSRRIQREISVRDPYGLHCFHTNGSCSC 1094
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 272/521 (52%), Gaps = 34/521 (6%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
LGF + + +G K + ++L C + +L+ + IH +V G V +V
Sbjct: 112 LGFFRKMQL--DGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQV-VGNAIV 168
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTN 175
N+YGKCG + EA+ VF+ LP N+VSW +LI+ QN + A+ VF M L+ P +
Sbjct: 169 NLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVRPND 228
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T + + ACS+L + GK H +++ + VGNSL ++Y CGS++ A F +
Sbjct: 229 ATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLVFEK 288
Query: 236 IREKNVMS---WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
+R ++V+S WT +I A NG ++ F KM EG+ PN+ T ++ C T+
Sbjct: 289 MRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTLAQC 348
Query: 293 -RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIA 350
++ A+V LG++L + + + + + K G + A+ +F+ + S N+V+W MI
Sbjct: 349 EKIFARVKHLGLEL----DTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIW 404
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+AQ + A ++ +++ +P+ TF +++ C R L + EQI
Sbjct: 405 AYAQQGFI-----------RAAFDLYKRMDC---EPNAVTFMAVMDSCLRPEDLPRAEQI 450
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA + +GF SDVV+ LV MY KCG ++ A +F + R++++W SM++ FA++
Sbjct: 451 HAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCY 510
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
++L+L+E MLL G +P+++T++ L AC + V EA Y + E I
Sbjct: 511 ERSLKLYERMLLEGTKPDKITYLAVLDACQS---VSEARRYAATFELELDIAA----RNA 563
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ + R G ++EA + ++ N V W+ I+G +HG
Sbjct: 564 AVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHG 604
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 271/537 (50%), Gaps = 32/537 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+Q + Y SLLQ+C +KS + +++H HI+ +G + ++ L+ +Y KCG +++A +V
Sbjct: 24 LQPARYASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEV 83
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F+ LP NV SWT+LI+ Y + + F M G P T LTACSS ++
Sbjct: 84 FELLPCPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGAL 143
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK IH VV E VGN++ +LY CG ++ A F R+ E+N++SW +I A
Sbjct: 144 NEGKAIHDCVVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAAN 202
Query: 252 GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG ++ F M +G ++PN+ T S+ C +L L G H I+ G+ S
Sbjct: 203 AQNGHCKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSY 262
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV---TWNAMIAGHAQMMDLAKDDLSAHN 367
L V NS++ +Y KCG VD A+ +F+ M +++ +W +IA AHN
Sbjct: 263 LFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAF------------AHN 310
Query: 368 GG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EA +F K++ G+ P+ TF ++L C+ L Q E+I A G D +G
Sbjct: 311 GHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACT---TLAQCEKIFARVKHLGLELDTTLG 367
Query: 427 TALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
TA V+ + K G + A VF + S+R ++SWT MI +A A L++ M
Sbjct: 368 TAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DC 424
Query: 486 RPNQVTFVGALAACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
PN VTF+ + +C + A + M+ ++ V+ +CL+ M+ + G ++ A
Sbjct: 425 EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESDVVLQ--VCLVTMYGKCGSVDSA 482
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKPKDCESYAMLLD 599
+ + + E + V W+ ++ +G E E++L KP D +Y +LD
Sbjct: 483 WSIFENLK-ERSVVAWNSMLSAFASNGCYERSLKLYERMLLEGTKP-DKITYLAVLD 537
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 334/611 (54%), Gaps = 14/611 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F++ L V G V S+Y S+ + C + +H H +K+ D + T +++
Sbjct: 227 FKDMLKV---GMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KC M +A KVF+ LP S+ ++I GY + Q A+ +F + ++L
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISL 343
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
ALTACS ++ G Q+H VK + V N++ +Y CG+L A F+ +
Sbjct: 344 SGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMER 403
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++ +SW +I A +N E V+ L F ML ++P++FT S+ C +L G ++
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEI 463
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H +K G + V ++++ +Y KCG++ EA+K+ D + V+WN++I+G
Sbjct: 464 HGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISG------- 516
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
S+ A FS++ G+ PD +T++++L +C+ + +E G+QIHA LK
Sbjct: 517 ----FSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLN 572
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
SDV + + LV+MY KCG ++ + +F + R ++W++MI +A H QA++LFE
Sbjct: 573 LHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFE 632
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+M L V+PN F+ L AC++ G V + L YF++MQ Y + P M+HY C++D+ R
Sbjct: 633 EMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRS 692
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
+ EA I+ M FE ++VIW ++ C+ GN+E+ A LL+L P+D +Y +L
Sbjct: 693 DQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLA 752
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ + G W +VA ++++ + KL + SWI ++D+V++F D HP+S EI++
Sbjct: 753 NVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTH 812
Query: 659 ELVEKAKCFGY 669
LV++ K GY
Sbjct: 813 LLVDEMKWAGY 823
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 264/521 (50%), Gaps = 25/521 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+++ +L+ C + +H ++ G D + LV++Y KC ++ A ++F
Sbjct: 139 ATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFRE 198
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P N+V W+++I+GYVQN + + +F DML+ G + T + +C+ L + +LG
Sbjct: 199 MPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+H + +K D+ +G + +Y+ C ++ A K FN + S+ +I
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ ++ L F + + +E +L+ + C + G Q+H L +K G N+ V
Sbjct: 319 DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVA 378
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+I+ +Y KCG + EA +FD M + V+WNA+IA H Q ++ K LS
Sbjct: 379 NTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVK-----------TLS 427
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F + S M+PD +T+ S++ C+ AL G +IH +K+G D VG+ALV+MY
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYG 487
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + A ++ + +T +SW S+I+GF++ S A + F ML GV P+ T+
Sbjct: 488 KCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYAT 547
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIK 549
L C+N + LG ++ + K+ D Y+ L+DM+ + G ++++ F+
Sbjct: 548 VLDVCANMATI--ELGK-QIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTP 604
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
K D+ V WS I HG+ E + + QLL +KP
Sbjct: 605 KRDY----VTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKP 641
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/560 (26%), Positives = 264/560 (47%), Gaps = 51/560 (9%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTG------------------------------- 104
++ +LQ+C N K+L+ + HA ++ T
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
H+D ++ Y + GNM AQ +FD +P +VVSW SL+S Y+ N +I +F+
Sbjct: 68 PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
M T L ACS +E LG Q+H ++ E+D G++L +YS C
Sbjct: 128 RMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L+ A + F + E+N++ W+ VI +N ++GL+ F ML G+ ++ T S+
Sbjct: 188 KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + + ++G Q+H +K +A + + + + +Y KC + +A K+F+ + + +
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQS 307
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
+NA+I G+A+ + G +AL IF L + + D + S LT CS +
Sbjct: 308 YNAIIVGYAR-----------QDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGH 356
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+G Q+H L +K G ++ V +++MY KCG + A +F +M R +SW ++I
Sbjct: 357 LEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAH 416
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKP 523
+ + L LF ML + + P+ T+ + AC+ +AL Y E+ + K
Sbjct: 417 EQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQ----QALNYGMEIHGRIVKSGM 472
Query: 524 VMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
+D ++ L+DM+ + G + EA +++ E V W+ I+G E
Sbjct: 473 GLDWFVGSALVDMYGKCGMLMEAEKIHDRLE-EKTTVSWNSIISGFSSQKQSENAQRYFS 531
Query: 582 QLLKLKP-KDCESYAMLLDI 600
Q+L++ D +YA +LD+
Sbjct: 532 QMLEMGVIPDNFTYATVLDV 551
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 158/305 (51%), Gaps = 8/305 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N E V++L +S+L + +Y S+++ C +++L+ IH IVK+G D+
Sbjct: 419 NEEIVKTLSL--FVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDW 476
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV + LV++YGKCG + EA+K+ D L VSW S+ISG+ Q E A F MLE
Sbjct: 477 FVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P N T T L C+++ +I LGKQIHA ++K D + ++L +YS CG++ +
Sbjct: 537 GVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS 596
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F + +++ ++W+ +I A +G Q ++ F +M ++PN S+ C M
Sbjct: 597 RLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHM 656
Query: 290 LSLRVGAQVHSLGI---KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTW 345
+ G +H I G ++ + ++ L + V+EA KL + M + V W
Sbjct: 657 GYVDKG--LHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIW 714
Query: 346 NAMIA 350
+++
Sbjct: 715 RTLLS 719
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 160/317 (50%), Gaps = 27/317 (8%)
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+FT + I C + +L G Q H+ I + + V N ++ Y K ++ A K+FD
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLA-----------KDDLS--------AHNG-GTEALSI 375
M H ++++WN MI G+A++ ++ +D +S HNG +++ I
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ S + D TFS +L CS + G Q+H L ++ GF +DVV G+ALV+MY K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
C +++ A R+F EM R L+ W+++I G+ + + L+LF+DML G+ +Q T+
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 496 LAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+C AG+ LG + ++ ++ ++ +DM+ + + +A+ +
Sbjct: 246 FRSC--AGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCDRMSDAWKVFNTLP 301
Query: 553 FEPNEVIWSVFIAGCRR 569
P + ++ + R+
Sbjct: 302 NPPRQSYNAIIVGYARQ 318
>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
Length = 805
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/703 (32%), Positives = 363/703 (51%), Gaps = 30/703 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG + +VS+L C + + L+ +IH V+ G V + LV++YG+CG+
Sbjct: 119 ILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178
Query: 125 MEEAQKVFDNLPR-INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ +A +F +L R ++VV W ++I+ QN P A+ +F ML+ G P VT +
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFK 238
Query: 184 ACSSLESIRLG--KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
ACSS S+R K HA + + D V +L + Y+ CG ++ A K F + E+N
Sbjct: 239 ACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNA 298
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT++I A + G + + F ML EG+ P TL + C LRV V ++
Sbjct: 299 VSWTSMIAAFTQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGCE---DLRVARLVEAI 354
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF----DGMSHVNLVTWNAMIAGHAQMMD 357
++G +++ + ++ Y +C ++A ++F +G LVT AMIA +AQ D
Sbjct: 355 AQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVT--AMIAVYAQCRD 412
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
++ G+ PD + + L C+ L AL +G QIHA
Sbjct: 413 R-----------RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAAD 461
Query: 418 GFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
L DV +G A+V+MY +CG + A F M R ISW +M++ A H L
Sbjct: 462 RRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDL 521
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F ML G ++ F+ L+AC++AG+V +F M ++ + P +HY C++D+
Sbjct: 522 FRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLG 581
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G + +A ++ M P+ W + CR +G+ E G +AAE++L+L+ +Y
Sbjct: 582 RKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVA 641
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L +I+ +AGRW+D A V+ + + L + S I I+ KV+ F D HPQS I+
Sbjct: 642 LCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAE 701
Query: 657 LDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
L+ ++ + GY+ L D +E +HSEKLAIAFG+++TP S + V+K+
Sbjct: 702 LERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKN 761
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN K I+ + REI+VRD +R H F +G C+C D+
Sbjct: 762 LRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDY 804
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 242/512 (47%), Gaps = 33/512 (6%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH-QDFFVMTFLVNVYGKCGNMEEAQKV 131
+++ V L++EC S++ +++H+ I + S +D ++ + LV +Y +CG++E A V
Sbjct: 28 DSAAAVRLVREC---NSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDV 84
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + ++V WT LIS YV AI +F +L+ G + + L+ACSS E +
Sbjct: 85 FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFL 144
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGA 250
G+ IH V+ V ++L S+Y CGSL A F + R +V+ W +I A
Sbjct: 145 AAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITA 204
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV---HSLGIKLGY 307
+NG + L F +ML GI P+ T S+ C + SLR +QV H+ + G
Sbjct: 205 NSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLR-ASQVKGFHACLDETGL 263
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S++ V +++ Y +CG +D A+K F M N V+W +MIA Q+
Sbjct: 264 GSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQI------------ 311
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G A+ F + G+ P T + L C L + A+ + G ++DV + T
Sbjct: 312 GHLLAVETFHAMLLEGVVPTRSTLFAALEGCED---LRVARLVEAIAQEIGVVTDVAIVT 368
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISW-----TSMITGFANHSLSHQALQLFEDMLL 482
LV Y +C E A RVF S R W T+MI +A +L+ +
Sbjct: 369 DLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIE 425
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
G+ P+++ ++ AL AC++ + E + + ++ + ++ M+ + G +
Sbjct: 426 RGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLR 485
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+A D M +E+ W+ ++ +HG +E
Sbjct: 486 DARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/626 (35%), Positives = 340/626 (54%), Gaps = 37/626 (5%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVS+TSL+ GYV++ AI +F M E + V LG L A E+ RL ++
Sbjct: 111 SVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM- 169
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ D ++ S Y G + A F+ + ++NV+SWT +I +NGE
Sbjct: 170 -------PDRDVVAWTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVN 222
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV--GAQVHSLGIKLGYASNLRVRNS 316
+ F M NE + T++ + G + + V A++ + + A+ N+
Sbjct: 223 LARKLFEVMPER----NEVSWTAM--LVGYIQAGHVEDAAELFNAMPEHPVAAC----NA 272
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+M + + G+VD A+ +F+ M + TW+AMI + Q L EALS F
Sbjct: 273 MMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFL-----------MEALSTF 321
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ G++P+ + SILT+C+ L L+ G ++HA L+ F DV +AL+ MY KC
Sbjct: 322 REMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKC 381
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G +++A RVF + ++ W SMITG+A H L QAL +F DM LAG+ P+ +T++GAL
Sbjct: 382 GNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGAL 441
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS G V E F M I+P +HY C++D+ R G +EEAFD IK M EP+
Sbjct: 442 TACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPD 501
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
VIW + CR H N E+ AA++LL+L+P + Y +L I+ S GRWED + ++
Sbjct: 502 AVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKF 561
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQSAEIFKVLDELVEKAKCFGYKQQESF 675
L+++ SWI +V+ F D L HP+ A I ++L++L GY SF
Sbjct: 562 ISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSF 621
Query: 676 EL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
L DEE S YHSE+ A+A+GLL P PI V+K+ +C DCH+ IK+I +T+
Sbjct: 622 VLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAKITS 681
Query: 731 REIIVRDSKRLHKFVNGHCTCRDFGV 756
REI++RD+ R H F +G C+CRD+ +
Sbjct: 682 REIVLRDANRFHHFKDGFCSCRDYWI 707
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 194/390 (49%), Gaps = 24/390 (6%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
VR +A+ + + P+ SY LL ++ ++ A + +D T
Sbjct: 123 VRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEAR----RLFDEMPDRDVVAWT 178
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G + EA+ +FD +P+ NVVSWT++ISGY QN + LA +F M E
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS 238
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
L + A ++ A + E + N++ + G +++A F
Sbjct: 239 WTAMLVGYIQAGHVEDA--------AELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVF 290
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
++RE++ +W+ +I A +N ++ L F +ML G++PN ++ SI +VC + L
Sbjct: 291 EKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLD 350
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G +VH+ ++ + ++ ++++ +Y+KCG +D+A+++F ++V WN+MI G+A
Sbjct: 351 YGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYA 410
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HA 412
Q H G +AL IF + +GM PD T+ LT CS +++G +I ++
Sbjct: 411 Q-----------HGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNS 459
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
+T+ + + +V++ + G +E A
Sbjct: 460 MTVNSSIRPGAEHYSCMVDLLGRSGLVEEA 489
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
+G+ G ++ A+ VF+ + + +W+++I Y QN A+ F +ML G P ++
Sbjct: 277 FGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSV 336
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ LT C++L + G+++HA +++ + D ++L ++Y CG+L+ A + F+
Sbjct: 337 ISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEP 396
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+++ W ++I ++G Q L F M G+ P+ T + C ++ G ++
Sbjct: 397 KDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREI 456
Query: 299 -HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+S+ + + ++ L + GLV+EA L M + V W A++
Sbjct: 457 FNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGA 511
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 95/199 (47%), Gaps = 6/199 (3%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
EALS E G + S +S+L C L +HA +++ D F ++
Sbjct: 314 LMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSA 373
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +Y KCGN+++A++VF ++V W S+I+GY Q+ E A+ +F DM AG P
Sbjct: 374 LITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPD 433
Query: 175 NVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T ALTACS ++ G++I ++ V + + L G + A
Sbjct: 434 GITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLI 493
Query: 234 -NRIREKNVMSWTTVIGAC 251
N E + + W ++GAC
Sbjct: 494 KNMPVEPDAVIWGALMGAC 512
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/697 (32%), Positives = 369/697 (52%), Gaps = 30/697 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V++L C + + + +H VK ++ V L+++Y K G + ++Q
Sbjct: 274 PDVAT--VVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQ 331
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE---AGNYPTN---VTLGTALT 183
+F NVVSW +++ G+ E IH D+L AG+ VT+ A+
Sbjct: 332 MIFKLNNNKNVVSWNTMVGGF----SAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVP 387
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C + K++H Y +K + D + N+ + Y+ CGSL+ A + F+ IR K + S
Sbjct: 388 VCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNS 447
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +IG ++ + L +M + G+ P+ FT+ S+ S C + SLR+G +VH I
Sbjct: 448 WNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFII 507
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ +L V S++ LY+ CG + Q LFD M +LV+WN +I GH Q
Sbjct: 508 RNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQ--------- 558
Query: 364 SAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
NG E AL +F ++ G++P + ++ CS L +L G + HA LK +
Sbjct: 559 ---NGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDN 615
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+ ++++MY K G I ++S+VF + ++ SW +MI G+ H + +A++LFE+M
Sbjct: 616 AFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQR 675
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
G P+ +TF+G L AC+++G+++E L Y + M+ + +KP + HY C+IDM R G ++
Sbjct: 676 TGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLD 735
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
A +M EP+ IW+ ++ CR H N+E+G A +L L+P+ E+Y +L +++
Sbjct: 736 NALRVAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYA 795
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
G+W+DV V+ +E L + SWI + KV+SF + EI + L
Sbjct: 796 GLGKWDDVRQVRQRMKEMSLRKDAGCSWIELNGKVFSFVVGERFLDGFEEIKSLWSILEM 855
Query: 663 KAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
K GY+ S +L++EE HSEKLAI +GL+ T + + V K+ +C D
Sbjct: 856 KIWKMGYRPDTSSVQHDLSEEEKIEQLRGHSEKLAITYGLIKTSEGTTLRVYKNLRICVD 915
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CHN K+I+ + REI+VRD+KR H F G C+C D+
Sbjct: 916 CHNAAKLISKVMEREIVVRDNKRFHHFNKGFCSCGDY 952
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 238/504 (47%), Gaps = 39/504 (7%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +++ C + +H +VKTG +D FV LV+ YG G + +A K+FD +
Sbjct: 189 TFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIM 248
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLG 194
P N+VSW S+ I VF D + G + P T+ T L C+ I +G
Sbjct: 249 PERNLVSWNSM-------------IRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVG 295
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K +H + VK + + V N+L +YS G + + F KNV+SW T++G
Sbjct: 296 KGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAE 355
Query: 255 GEAVQGLRFFSKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G+ +ML SE ++ +E T+ + VC L ++H +K + +
Sbjct: 356 GDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDEL 415
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ N+ + Y KCG + AQ++F G+ L +WNA+I G+AQ D + L AH
Sbjct: 416 LANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSD-PRLSLDAH------ 468
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++ +SG+ PD +T S+L+ CS+L +L G+++H ++ D+ V +++++
Sbjct: 469 ----LQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 524
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y CG + +F M +L+SW ++ITG + +AL LF M+L G++P ++
Sbjct: 525 YIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISM 584
Query: 493 VGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ ACS G A +++ I +IDM+ + G I ++
Sbjct: 585 MTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIA------CSIIDMYAKNGAITQSSKV 638
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHG 571
+ E + W+ I G HG
Sbjct: 639 FNGLK-EKSAASWNAMIMGYGMHG 661
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 204/398 (51%), Gaps = 13/398 (3%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+E K + ++ + C + L + + +H + +K D + V Y KCG++
Sbjct: 372 SEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLS 431
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
AQ+VF + + SW +LI GY Q+S P L++ L M +G P N T+ + L+ACS
Sbjct: 432 YAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L+S+RLGK++H ++++ E D V S+ SLY CG L + F+ + + +++SW T
Sbjct: 492 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNT 551
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
VI +NG + L F +M+ GIQP ++ ++ C + SLR+G + H+ +K
Sbjct: 552 VITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHL 611
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
N + SI+ +Y K G + ++ K+F+G+ + +WNAMI G+ H
Sbjct: 612 LEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEKSAASWNAMIMGYGM-----------H 660
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVV 425
EA+ +F ++ +G PD TF +LT C+ L +G + + G ++
Sbjct: 661 GRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKH 720
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMIT 462
+++M + G+++ A RV EMS + W S+++
Sbjct: 721 YACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLS 758
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 246/523 (47%), Gaps = 47/523 (8%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVK--TGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
LLQ RK + IH H+V T D + T ++ +Y CG+ ++++ FD L
Sbjct: 90 LLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQ 196
N+ W ++IS Y +N + +F+ M+ + P N T + AC+ + + +G
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H VVK +D VGN+L S Y T G ++ A+K F+ + E+N++SW ++I +NG+
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD 268
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
P+ T+ ++ VC + VG VH +KL L V N+
Sbjct: 269 ------------DGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+M +Y K G + ++Q +F ++ N+V+WN M+ G + D+ GT L
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIH---------GTFDLLRQ 367
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
S +K D T + + +C L +++H +LK F+ D ++ A V Y KC
Sbjct: 368 MLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKC 427
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + A RVF + ++TL SW ++I G+A S +L M +G+ P+ T L
Sbjct: 428 GSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLL 487
Query: 497 AACSNAGMVY---EALGYF--EMMQKEYKIKPVMDHYMCLIDMFVRLG---CIEEAFDFI 548
+ACS + E G+ ++++ + Y+ ++ +++ G ++ FD +
Sbjct: 488 SACSKLKSLRLGKEVHGFIIRNWLERDLFV------YLSVLSLYIHCGELCTVQVLFDAM 541
Query: 549 KKMDFEPNEVI-WSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
E N ++ W+ I G ++G E LG + L ++P
Sbjct: 542 -----EDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQP 579
>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 595
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/582 (35%), Positives = 337/582 (57%), Gaps = 28/582 (4%)
Query: 186 SSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGS---LNSAIKAFNRIREK-N 240
SSL +R QIHA+ ++ D +G L + S ++ A K F++I + N
Sbjct: 28 SSLTKLR---QIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPIN 84
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVH 299
V W T+I E G +V + + +M + G ++P+ T + G M +R+G +H
Sbjct: 85 VFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIH 144
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
S+ I+ G+ S + V+NS+++LY CG V A K+FD M +LV WN++I G A+
Sbjct: 145 SVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE----- 199
Query: 360 KDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
NG E AL+++++++ G+KPD +T S+L+ C+++ AL G++ H +K G
Sbjct: 200 -------NGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVG 252
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
++ L+++Y +CGR+E A +F EM + +SWTS+I G A + L +A++LF+
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFK 312
Query: 479 DM-LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
+M G+ P ++TFVG L ACS+ GMV E YF M +EYKI+P ++H+ C++D+ R
Sbjct: 313 NMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLAR 372
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G +++A+++I KM +PN VIW + C HG+ +L A ++L+L+P Y +L
Sbjct: 373 AGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLL 432
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+++ S RW DV ++ + + + S + + ++V+ F D HPQ+ I+ L
Sbjct: 433 SNMYASEQRWSDVQKIRKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKL 492
Query: 658 DELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
E+ ++ + GY Q S E ++E+A VYHSEK+AIAF L++TP PI VVK+
Sbjct: 493 KEMTDRLRLEGYVPQISNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNL 552
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH IK+++ + REI+VRD R H F NG C+C+D+
Sbjct: 553 KVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 205/416 (49%), Gaps = 36/416 (8%)
Query: 78 VSLLQECVNR------KSLSNAEIIHAHIVKTG---------SHQDFFVMTFLVNVYGKC 122
+ ++++C+N SL+ IHA ++ G H F++++
Sbjct: 12 LPMVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSL-----PSP 66
Query: 123 GNMEEAQKVFDNLPR-INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGT 180
M A KVF + + INV W +LI GY + A+ ++ +M +G P T
Sbjct: 67 PPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVEPDTHTYPF 126
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L A + +RLG+ IH+ V++ V NSL LY+ CG + SA K F+++ EK+
Sbjct: 127 LLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+++W +VI ENG+ + L +++M +GI+P+ FT+ S+ S C + +L +G + H
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHV 246
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
IK+G NL N ++ LY +CG V+EA+ LFD M N V+W ++I G
Sbjct: 247 YMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG--------- 297
Query: 361 DDLSAHNGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTG 418
L+ + G EA+ +F + S G+ P TF IL CS +++G E ++ +
Sbjct: 298 --LAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYK 355
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQA 473
+ +V++ + G++++A ++M + ++ W +++ H S A
Sbjct: 356 IEPRIEHFGCMVDLLARAGQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 116/214 (54%), Gaps = 1/214 (0%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T +Y LL+ + E IH+ ++++G +V L+++Y CG++ A KVFD
Sbjct: 121 THTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFD 180
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+P ++V+W S+I+G+ +N +PE A+ ++ +M G P T+ + L+AC+ + ++ L
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTL 240
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
GK+ H Y++K + N L LY+ CG + A F+ + +KN +SWT++I
Sbjct: 241 GKRFHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAV 300
Query: 254 NGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVC 286
NG + + F M S EG+ P E T I C
Sbjct: 301 NGLGKEAIELFKNMESKEGLLPCEITFVGILYAC 334
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 9/223 (4%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL++ TE G K + VSLL C +L+ + H +++K G ++ L
Sbjct: 204 EEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVL 263
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPT 174
+++Y +CG +EEA+ +FD + N VSWTSLI G N + AI +F +M + G P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPC 323
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T L ACS ++ G + +Y+ E + L + G + A +
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 383
Query: 234 NRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
++ + NV+ W T++GAC +G++ L ++M ++PN
Sbjct: 384 LKMPMQPNVVIWRTLLGACTVHGDS--DLAELARMKILQLEPN 424
>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g52630-like [Cucumis
sativus]
Length = 598
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/571 (35%), Positives = 337/571 (59%), Gaps = 17/571 (2%)
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
S+R G Q+HA+++K+ + V ++L +LYS +++ F+ +K+ +W++VI
Sbjct: 39 RSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVI 98
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +N + L+FF +ML++G++P++ S + CG + VG VH L +K GY
Sbjct: 99 SAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYY 158
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++ V +S++ +Y KCG + +A+ LFD M N+V+W+ MI G+AQ+ D
Sbjct: 159 CDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDD----------- 207
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
G EAL++F + + + +TFSS++ +CS LE G+ IH L LK F S VG+A
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSA 267
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y KCG IE A +VF E+ TR L W SM+ A H+ + + LFE+M G++PN
Sbjct: 268 LISLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPN 327
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+ F+ L ACS+AG+V + YF +M ++Y I+P +HY L+D+ R G ++EA I
Sbjct: 328 FIXFLSVLYACSHAGLVEKGREYFSLM-RDYGIEPETEHYASLVDLLGRAGKLQEAVSVI 386
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K+M P E +W + GCR H + E+ + A+++L++ + +L + + +AGR+E
Sbjct: 387 KQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYE 446
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+ A ++ + R+ + + SW+ +KV++F D H + EI++ L+EL E+ + G
Sbjct: 447 EAARMRKMLRDRGVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAG 506
Query: 669 YKQQESFELT----DEESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y SF L +E++ ++ YHSE+LAIAFGL+ P PI V+K+ +C DCH IK
Sbjct: 507 YVADTSFVLRAVDGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIK 566
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ R +IVRD+ R H+F +G C+C D+
Sbjct: 567 FMSKCCGRVLIVRDNNRFHRFEDGKCSCGDY 597
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 198/396 (50%), Gaps = 12/396 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+LL +SL +HAHI+K G V L+N+Y K + +VFD P+
Sbjct: 30 NLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKK 89
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ +W+S+IS + QN P LA+ F ML G P + +A AC L +GK +H
Sbjct: 90 SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
VK D VG+SL +Y+ CG + A F+ + E+NV+SW+ +I + + V
Sbjct: 150 CLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGV 209
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F + L E + N+FT +S+ VC + L +G +H L +K+ + S+ V ++++
Sbjct: 210 EALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALI 269
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
LY KCG+++ A ++FD + NL WN+M+ AQ H +F +
Sbjct: 270 SLYSKCGVIEGAYQVFDEIPTRNLGLWNSMLIACAQ-----------HAHTQRVFGLFEE 318
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + GMKP+ F S+L CS +E+G + +L G + +LV++ + G+
Sbjct: 319 MGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGK 378
Query: 439 IERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQA 473
++ A V +M R S W +++TG H + A
Sbjct: 379 LQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMA 414
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 161/354 (45%), Gaps = 8/354 (2%)
Query: 1 MASVPWAAAAACTLETKSRQPSSSLATLKD--KNHTVSYQRSGSKLIQLNGNSEPVRSLG 58
+ ++P + L +K++ P SL + K + ++ S Q N P+ +L
Sbjct: 56 LQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVISAFAQ---NEAPLLALQ 112
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F + L +G + Y S + C + + +H VKTG + D FV + LV++
Sbjct: 113 FFRRM--LNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDM 170
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG + +A+ +FD +P NVVSW+ +I GY Q A+ +F L + T
Sbjct: 171 YAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTF 230
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ + CSS + LGK IH +K + + VG++L SLYS CG + A + F+ I
Sbjct: 231 SSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPT 290
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N+ W +++ AC ++ + F +M + G++PN S+ C + G +
Sbjct: 291 RNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREY 350
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
SL G S++ L + G + EA + M W A++ G
Sbjct: 351 FSLMRDYGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTG 404
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
LN + + + ++L +R +L QG Q+HA LK G + +V L+N+Y K
Sbjct: 16 LNQNSFEQNYRQICNLLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQL 75
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ +VF E ++ +W+S+I+ FA + ALQ F ML GVRP+ + A A
Sbjct: 76 PLFSLQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKA 135
Query: 499 CSNAGMVYEALGYFEM--MQKEYKIKPVMDHYMC-------LIDMFVRLGCIEEAFDFIK 549
C G+ + K V Y C L+DM+ + G I +A
Sbjct: 136 C----------GFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGEIGDARHLFD 185
Query: 550 KMDFEPNEVIWSVFIAG 566
+M E N V WS I G
Sbjct: 186 EMP-ERNVVSWSGMIYG 201
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 350/618 (56%), Gaps = 18/618 (2%)
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
W + + + Q A+ ++ ML G+ P T AL +C++L LG Q H +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF--NRIREKNVMSWTTVIGACGENGEAVQG 260
K + V L S+Y +++A K F N K + + ++ N + +
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
+ F +M EG+ N TL + C + ++L +G+ +H +K G+ S++ V N + +
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL 379
Y+KCG V+ AQKLFD M L++WNAM++G+AQ NG T L ++ +
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ------------NGLATNVLELYRNM 244
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ +G+ PD T +L+ C+ L A G ++ +GF S+ + AL+NMY +CG +
Sbjct: 245 DMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNL 304
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+A VF M RTL+SWT++I G+ H A+QLF++M+ +G+ P+ FV L+AC
Sbjct: 305 TKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSAC 364
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S+AG+ + L YF+MM++ Y+++P +HY C++D+ R G ++EA I+ M +P+ +
Sbjct: 365 SHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV 424
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + C+ H N+EL A E++++L+P++ Y +L +I+ +A + V ++ + +E
Sbjct: 425 WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE 484
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL-VEKAKCFGYKQQESFELT 678
+KL + S++ +K +V+ F D H QS EI++VL+EL + FG ++++ E +
Sbjct: 485 KKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREES 544
Query: 679 DEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+++ + HSEKLA+AFGLLNT + ++++K+ +C DCH F K+++ + R++ VR
Sbjct: 545 NKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVR 604
Query: 737 DSKRLHKFVNGHCTCRDF 754
D+ R H F NG C+C+D+
Sbjct: 605 DATRFHHFRNGSCSCKDY 622
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 220/472 (46%), Gaps = 21/472 (4%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F +ALS+ L G + ++ L+ C H I K G + FV T
Sbjct: 30 FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 89
Query: 115 LVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+++Y K ++ A+KVF+ R V + +L+SGYV NS+ A+ +F M E G
Sbjct: 90 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVP 149
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+VTL + AC S ++ LG +H +KY + D SV N ++Y CGS+N A K
Sbjct: 150 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 209
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + K ++SW ++ +NG A L + M G+ P+ TL + S C + +
Sbjct: 210 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 269
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
VG +V G+ SN + N+++ +Y +CG + +AQ +FDGM LV+W A+I G+
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 329
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
H G A+ +F ++ SG++PD F +L+ CS +QG +
Sbjct: 330 GM-----------HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFK 378
Query: 413 LTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLS 470
+ + L + +V++ + GR++ A + M + + W +++ H
Sbjct: 379 MMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNV 438
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
A FE ++ + P + + L+ + + + +M KE K+K
Sbjct: 439 ELAELAFERVI--ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK 488
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/722 (31%), Positives = 371/722 (51%), Gaps = 53/722 (7%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
AL V P+ + SY +++ + + A + + +D F ++ Y +
Sbjct: 68 ALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQM----PERDLFSWNVMLTGYVR 123
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL--- 178
+ +A+++FD +P +VVSW SL+SGY QN + A VF +M E + N L
Sbjct: 124 NCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAY 183
Query: 179 ---GTALTACSSLES------IRLGKQIHAYVVKYQTED-----------DTSVGNSLCS 218
G AC ES I + +V K + D D N++ S
Sbjct: 184 VHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMIS 243
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
Y+ G L+ A + F+ ++V +WT ++ +NG + FF +M + NE +
Sbjct: 244 GYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVS 299
Query: 279 LTSISSVCGTMLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
++ + + + ++ S+ + N+ N+++ Y + G + +A+K FD M
Sbjct: 300 YNAMIAGYVQTKKMDIARELFESMPCR-----NISSWNTMITGYGQIGDIAQARKFFDMM 354
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
+ V+W A+IAG+AQ S H EAL++F ++ G + TF L+
Sbjct: 355 PQRDCVSWAAIIAGYAQ---------SGHY--EEALNMFVEIKQDGESLNRATFGCALST 403
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
C+ + ALE G+QIH +K G+ + VG AL+ MY KCG I+ A+ F + + ++SW
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+M+ G+A H QAL +FE M AGV+P+++T VG L+ACS+ G++ YF M K
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTK 523
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
+Y + P HY C+ID+ R G +EEA D I+ M F+P W + R HGN ELG
Sbjct: 524 DYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGE 583
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AAE + K++P++ Y +L +++ ++GRW D +++ R+ + + +SW+ +++K+
Sbjct: 584 KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKI 643
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLA 692
++F D HP+ I+ L+EL K + GY L D +E YHSEKLA
Sbjct: 644 HTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLA 703
Query: 693 IAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
+AFG+L P PI V+K+ +C DCH+ IK I+ + R II+RDS R H F G C+C
Sbjct: 704 VAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNEGFCSCG 763
Query: 753 DF 754
D+
Sbjct: 764 DY 765
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 148/346 (42%), Gaps = 70/346 (20%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N + +++ G D A +F+ M + V++NAMI+G+ + +K +L A +
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRN---SKFNL--------ARN 101
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ + DL++++ +LT R L ++ L + DVV +L++ Y
Sbjct: 102 LFDQMP----ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPE----KDVVSWNSLLSGYA 153
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE----------DMLLAG 484
+ G ++ A VF M + ISW ++ + ++ +A LFE + L+ G
Sbjct: 154 QNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 485 -VRPNQVTFVGAL-------AACSNAGMV--YEALGYFEMMQKEYKIKPVMD--HYMCLI 532
VR ++ L A S M+ Y G ++ + P D + ++
Sbjct: 214 FVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG------------------CRR----- 569
+V+ G ++EA F +M E NEV ++ IAG CR
Sbjct: 274 SGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN 332
Query: 570 ---HGNMELGFYA-AEQLLKLKP-KDCESYAMLLDIFVSAGRWEDV 610
G ++G A A + + P +DC S+A ++ + +G +E+
Sbjct: 333 TMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEA 378
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 10/153 (6%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D++ ++ + + G + A VF M R+ +S+ +MI+G+ +S + A LF+ M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+ V G + C + +A F++M ++ + + L+ + + G +
Sbjct: 108 ERDLFSWNVMLTGYVRNCR----LGDARRLFDLMPEKDVVS-----WNSLLSGYAQNGYV 158
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+EA + M E N + W+ +A +G +E
Sbjct: 159 DEAREVFDNMP-EKNSISWNGLLAAYVHNGRIE 190
>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
Length = 696
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/654 (32%), Positives = 347/654 (53%), Gaps = 21/654 (3%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F+ LVN+Y K A P VVS+T+ ISG Q+++P A+ F ML
Sbjct: 54 FLCAHLVNLYSKLDLPGAAAASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRL 113
Query: 170 GNYPTNVTLGTAL-TACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLN 227
G P + T +A A S+ G Q+HA +++ DD V + +Y G L
Sbjct: 114 GLRPNDFTFPSAFKAAASAPPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLA 173
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A + F+ + +NV++W V+ +G ++ + + + G PN ++ + + C
Sbjct: 174 LARRLFDEMPNRNVVAWNAVMTNAVLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACA 233
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
M +L +G Q + K G+ ++ V NS++ Y KC V +A+ +FDGM N V+W +
Sbjct: 234 GMTNLSLGEQFYGFVAKCGFGKDVSVSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCS 293
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
M+ +AQ NG E A ++ +G +P + SS+LT C+ L+ L+
Sbjct: 294 MVVAYAQ------------NGAEEEAFFVYLGARRAGEEPTDFMVSSVLTTCAGLLGLDL 341
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G +HA+ +++ S++ V +ALV+MY KCG IE A +VF EM R L++W +MI G+A+
Sbjct: 342 GRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVFFEMPQRNLVTWNAMIGGYAH 401
Query: 467 HSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+H AL +F+ M++ PN +T V L ACS G+ E F+ M+ + I+P +
Sbjct: 402 IGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRGGLTKEGYELFQTMKWRFGIEPRI 461
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY C++D+ R G E A+ I+ M P+ +W + GC+ HG ELG AAE+L +
Sbjct: 462 EHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGALLGGCKMHGKTELGRIAAEKLFE 521
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P+D ++ +L ++ SAGRW + V+ + + + SWI K+ V+ F+ D
Sbjct: 522 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKDPGRSWITWKNVVHVFQAKDT 581
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EESASVY-HSEKLAIAFGLLNT 700
H + EI +L +L + + GY + L D E+ + V+ HSEKLA+AFGL+
Sbjct: 582 THDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEEEEKESEVFQHSEKLALAFGLICI 641
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P PI ++K+ +C DCH K I+ + REIIVRD+ H F N C+C+D+
Sbjct: 642 PPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRDNNMFHHFKNYECSCKDY 695
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 200/391 (51%), Gaps = 19/391 (4%)
Query: 96 IHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+HA ++ G D FV +++Y K G + A+++FD +P NVV+W ++++ V +
Sbjct: 142 LHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPNRNVVAWNAVMTNAVLDG 201
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+P + + + AG P V++ AC+ + ++ LG+Q + +V K D SV N
Sbjct: 202 RPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVSVSN 261
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
S+ Y C + A F+ + +N +SW +++ A +NG + + G +P
Sbjct: 262 SVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAGEEP 321
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+F ++S+ + C +L L +G +H++ ++ SN+ V ++++ +Y KCG +++A+++F
Sbjct: 322 TDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAEQVF 381
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSS 393
M NLVTWNAMI G+A + D AHN ALS+F K+ P+ T +
Sbjct: 382 FEMPQRNLVTWNAMIGGYAHIGD-------AHN----ALSVFDKMIMGQETAPNYITLVN 430
Query: 394 ILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+LT CSR ++G E + + G + +V++ + G ERA ++ M R
Sbjct: 431 VLTACSRGGLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMR 490
Query: 453 TLIS-WTSMITGFANHSLSH----QALQLFE 478
IS W +++ G H + A +LFE
Sbjct: 491 PSISVWGALLGGCKMHGKTELGRIAAEKLFE 521
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 344/601 (57%), Gaps = 18/601 (2%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQD---FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
R SL NA + + + ++ + T L+ Y + G +EEA+ +FD +P +VV+W
Sbjct: 20 RSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAW 79
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
T++I+GY ++ A F +M++ G P TL + L +C +++ + G +H VVK
Sbjct: 80 TAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 204 YQTEDDTSVGNSLCSLYSTCG-SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
E V N++ ++Y+TC ++ +A F I+ KN ++WTT+I G+ + GL+
Sbjct: 140 LGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLK 199
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
+ +ML E + + +T ++ S+ G Q+H+ IK G+ SNL V NSI+ LY
Sbjct: 200 MYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYC 259
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
+CG + EA+ F M +L+TWN +I+ +L + D S EAL +F + S
Sbjct: 260 RCGYLSEAKHYFHEMEDKDLITWNTLIS------ELERSDSS------EALLMFQRFESQ 307
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G P+ YTF+S++ C+ + AL G+Q+H + GF +V + AL++MY KCG I +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 443 SRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
RVF E+ R L+SWTSM+ G+ +H +A++LF+ M+ +G+RP+++ F+ L+AC +
Sbjct: 368 QRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRH 427
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
AG+V + L YF +M+ EY I P D Y C++D+ R G I EA++ +++M F+P+E W
Sbjct: 428 AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWG 487
Query: 562 VFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ C+ H N + AA ++++LKPK +Y ML I+ + G+W D A V+ + R
Sbjct: 488 AILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMM 547
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
+ SWI ++++V+SF +D + P ++ ++ VL L+E+ + GY + + D+
Sbjct: 548 GNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQ 607
Query: 681 E 681
E
Sbjct: 608 E 608
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 198/374 (52%), Gaps = 15/374 (4%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQKVFDNLPR 137
S+L+ C N K L+ ++H +VK G +V ++N+Y C ME A +F ++
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKV 175
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N V+WT+LI+G+ + ++ ML T + A+ A +S++S+ GKQI
Sbjct: 176 KNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQI 235
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA V+K + + V NS+ LY CG L+ A F+ + +K++++W T+I E ++
Sbjct: 236 HASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDS 294
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L F + S+G PN +T TS+ + C + +L G Q+H + G+ N+ + N++
Sbjct: 295 SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANAL 354
Query: 318 MYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+ +Y KCG + ++Q++F + + NLV+W +M+ G+ +H G EA+ +F
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG-----------SHGYGAEAVELF 403
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKK 435
K+ SSG++PD F ++L+ C +E+G + + + + G D + +V++ +
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 436 CGRIERASRVFVEM 449
G+I A + M
Sbjct: 464 AGKIGEAYELVERM 477
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 344/638 (53%), Gaps = 19/638 (2%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQE 83
+ L DKN +S+ + + +Q N + +R L F+E + +G V S+Y S+ +
Sbjct: 215 FSELPDKN-WISWSAAIAGCVQ---NDQLLRGLKLFKE---MQRKGIGVSQSTYASVFRS 267
Query: 84 CVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
C + +H H +KT D V T +++Y KC NM +A K+F LP N+ S+
Sbjct: 268 CAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSY 327
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
++I GY +N Q A +FL + + V+L AL+A + ++ G Q+H +K
Sbjct: 328 NAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIK 387
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ V N++ +Y CG+L A F+ + ++ +SW +I AC +N + L
Sbjct: 388 SNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSH 447
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F ML ++P+EFT S+ C + G +VH IK G + V ++++ +Y K
Sbjct: 448 FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSK 507
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG+++EA+K+ + +V+WNA+I+G S ++ FS + G
Sbjct: 508 CGMMEEAEKIHYRLEEQTMVSWNAIISG-----------FSLQKKSEDSQRFFSHMLEMG 556
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
++PD +T++++L C+ L + G+QIHA +K LSDV + + LV+MY KCG + +
Sbjct: 557 VEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSL 616
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+F + R ++W +MI GFA H L +AL+LFE ML ++PN TFV L ACS+ G
Sbjct: 617 LMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVG 676
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ L YF+ M Y ++P ++HY C++D+ R G +EEA I+ M FE + +IW
Sbjct: 677 NAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTL 736
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
++ C+ GN+E+ AA LLKL P+D +Y +L +I+ AG W+ V+ ++ R L
Sbjct: 737 LSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLK 796
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+ SWI +KD+V++F D HP+ I+ +LD L+
Sbjct: 797 KEPGCSWIEVKDEVHTFLVCDKAHPKCEMIYSLLDLLI 834
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/562 (29%), Positives = 276/562 (49%), Gaps = 56/562 (9%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC------------- 122
++ + QEC NR++L + HAH++ +G FV L+ +Y KC
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 123 ------------------GNMEEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVF 163
G ME AQ VF+++P +VVSW SLISGY+QN + +I VF
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
L M + G + TL +L CS LE LG QIH V+ + D G++L +Y+ C
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
SL ++ F+ + +KN +SW+ I C +N + ++GL+ F +M +GI ++ T S+
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C + + R+G Q+H +K + S++ V + + +Y KC + +A KLF + NL
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
++NAMI G+A+ + G +A +F +L + D + S L+ + +
Sbjct: 326 SYNAMIIGYAR-----------NEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKG 374
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+G Q+H L +K+ S++ V A+++MY KCG + AS +F EM R +SW ++IT
Sbjct: 375 HSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITA 434
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+ + L F ML + + P++ T+ L AC+ + + IK
Sbjct: 435 CEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRI-----IKS 489
Query: 524 VMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG--CRRHGNMELGF 577
M M L+DM+ + G +EEA +++ E V W+ I+G ++ F
Sbjct: 490 GMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLE-EQTMVSWNAIISGFSLQKKSEDSQRF 548
Query: 578 YAAEQLLKLKPKDCESYAMLLD 599
++ + ++P D +YA +LD
Sbjct: 549 FSHMLEMGVEP-DNFTYATVLD 569
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/497 (29%), Positives = 250/497 (50%), Gaps = 19/497 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH V+ G D + LV++Y KC ++E++ VF LP N +SW++ I+G VQN Q
Sbjct: 179 IHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQ 238
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ +F +M G + T + +C+ L + RLG Q+H + +K D VG +
Sbjct: 239 LLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTA 298
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+Y+ C +++ A K F+ + + N+ S+ +I N + Q + F ++ +
Sbjct: 299 TLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFD 358
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E +L+ S + G Q+H L IK +SN+ V N+I+ +Y KCG + EA LFD
Sbjct: 359 EVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFD 418
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M + V+WNA+I Q + + LS F + S M+PD +T+ S+L
Sbjct: 419 EMEIRDPVSWNAIITACEQ-----------NESEGKTLSHFGAMLRSKMEPDEFTYGSVL 467
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ A G ++H +K+G + VG+ALV+MY KCG +E A ++ + +T++
Sbjct: 468 KACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMV 527
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW ++I+GF+ S + + F ML GV P+ T+ L C+N V LG ++
Sbjct: 528 SWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV--GLGK-QIH 584
Query: 516 QKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+ K++ + D Y+ L+DM+ + G + ++ +K + + V W+ I G HG
Sbjct: 585 AQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMICGFAYHGLG 643
Query: 574 ELGFYAAEQLL--KLKP 588
E E +L +KP
Sbjct: 644 EEALELFEHMLHENIKP 660
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 336/581 (57%), Gaps = 17/581 (2%)
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
AL C + GK +H ++K D N L ++Y L A K F+ + E
Sbjct: 42 ANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPE 101
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+N +S+ T+I E+ ++ + F ++ E + PN+FT S+ C TM L +G Q+
Sbjct: 102 RNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQI 160
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H IK+G S++ V N++M +Y KCG ++ + +LF H N VTWN +I GH Q+ D
Sbjct: 161 HCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGD- 219
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
G +AL +F + ++ T+SS L C+ L ALE G QIH+LT+KT
Sbjct: 220 ----------GEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTT 269
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F D+VV AL++MY KCG I+ A VF M+ + +SW +MI+G++ H L +AL++F+
Sbjct: 270 FDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFD 329
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M V+P+++TFVG L+AC+NAG++ + YF M +++ I+P ++HY C++ + R
Sbjct: 330 KMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRG 389
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +++A I ++ F+P+ ++W + C H ++ELG +A+++L+++P+D ++ +L
Sbjct: 390 GHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLS 449
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ +A RW++VA V+ + + + + SWI + V+SF D HP+ I +L+
Sbjct: 450 NMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLE 509
Query: 659 ELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTT 713
L K K GY + ++ DEE + HSE+LA++FG++ TP SPI ++K+
Sbjct: 510 WLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLR 569
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH IK I+ + REI+VRD R H F G C+C D+
Sbjct: 570 ICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDY 610
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 222/427 (51%), Gaps = 14/427 (3%)
Query: 44 LIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT 103
LIQ + V+S + + + +Y + LQ+C+ + S + +H I+K
Sbjct: 8 LIQFSRRGFSVQSAKLTQEFVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKR 67
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF 163
G D F L+N+Y K + +A K+FD +P N +S+ +LI GY ++ + AI +F
Sbjct: 68 GGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELF 127
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
+ L P T + L AC+++E + LG QIH +V+K D V N+L +Y+ C
Sbjct: 128 V-RLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKC 186
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G + ++++ F +N ++W TVI + G+ + LR F ML +Q E T +S
Sbjct: 187 GRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSAL 246
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C ++ +L G Q+HSL +K + ++ V N+++ +Y KCG + +A+ +FD M+ + V
Sbjct: 247 RACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEV 306
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+WNAMI+G+ S H G EAL IF K+ + +KPD TF +L+ C+
Sbjct: 307 SWNAMISGY-----------SMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGL 355
Query: 404 LEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMI 461
L+QG+ ++ G + T +V + + G +++A ++ E+ + +++ W +++
Sbjct: 356 LDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALL 415
Query: 462 TGFANHS 468
H+
Sbjct: 416 GACVIHN 422
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 2/322 (0%)
Query: 47 LNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
+ G +E VR L E L ++ S+LQ C + L+ IH H++K G H
Sbjct: 111 IQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLH 170
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
D FV L++VY KCG ME + ++F P N V+W ++I G+VQ E A+ +FL+M
Sbjct: 171 SDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNM 230
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
LE T VT +AL AC+SL ++ G QIH+ VK + D V N+L +Y+ CGS+
Sbjct: 231 LEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSI 290
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A F+ + +++ +SW +I +G + LR F KM ++P++ T + S C
Sbjct: 291 KDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSAC 350
Query: 287 GTMLSLRVG-AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
L G A S+ G + +++L + G +D+A KL D + +++
Sbjct: 351 ANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMV 410
Query: 345 WNAMIAGHAQMMDLAKDDLSAH 366
W A++ D+ +SA
Sbjct: 411 WRALLGACVIHNDIELGRISAQ 432
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 44/305 (14%)
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+ +++ L C + +G+ +H LK G D+ L+NMY K + AS++F E
Sbjct: 39 HAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDE 98
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--------- 499
M R IS+ ++I G+A +A++LF L V PNQ TF L AC
Sbjct: 99 MPERNTISFVTLIQGYAESVRFLEAIELFV-RLHREVLPNQFTFASVLQACATMEGLNLG 157
Query: 500 ------------------SNAGM-VYEALGYFEMMQKEYKIKPVMDH--YMCLIDMFVRL 538
SNA M VY G E + + P + + +I V+L
Sbjct: 158 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQL 217
Query: 539 GCIEEAFD-FIKKMDF--EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESY 594
G E+A F+ +++ + EV +S + C +E G +K KD
Sbjct: 218 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT 277
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
L+D++ G +D +V +L +++ D+ SW + + S GL ++ IF
Sbjct: 278 NALIDMYAKCGSIKDARLVFDL-----MNKQDEVSW----NAMISGYSMHGLGREALRIF 328
Query: 655 KVLDE 659
+ E
Sbjct: 329 DKMQE 333
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/591 (34%), Positives = 326/591 (55%), Gaps = 12/591 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + L + IHA++++ G+ D V+ L++ Y KC ++ +K+FD +
Sbjct: 143 SVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVK 202
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
N++SWT++ISGY+QNS A+ +F +M G P + LT+C SLE++ G+Q+H
Sbjct: 203 NIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVH 262
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AY +K E + V N L +Y+ L A K F+ + E+NV+S+ +I +
Sbjct: 263 AYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLS 322
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F +M P+ T S+ V ++ +L + Q+H L IK G + +L ++++
Sbjct: 323 EALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALI 382
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC V +A+ +F+ M+ ++V WNAM G+ Q H EAL ++S
Sbjct: 383 DVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ-----------HLENEEALKLYST 431
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
L S KP+ +TF++++T S L +L G+Q H +K G V ALV+MY KCG
Sbjct: 432 LQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGS 491
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A ++F R ++ W SMI+ A H + +AL +F +M+ G++PN VTFV L+A
Sbjct: 492 IEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSA 551
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+AG V + L +F M + IKP +HY C++ + R G + EA +FI+KM EP +
Sbjct: 552 CSHAGXVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 610
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR GN+ELG YAAE + PKD SY +L +IF S G W DV V++
Sbjct: 611 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMD 670
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ + SWI + +KV F H ++ I VLD L++ K GY
Sbjct: 671 SSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGY 721
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 290/534 (54%), Gaps = 18/534 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C + +H +V++G QD +V T L++ Y K GB+E A+ VFD L
Sbjct: 42 SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEK 101
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V+WT++I+GY + + +++ +F M E P + + L+ACS LE + GKQIH
Sbjct: 102 TAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 161
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AYV++ TE D SV N L Y+ C + + K F+++ KN++SWTT+I +N
Sbjct: 162 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 221
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ ++ F +M G +P+ F TS+ + CG++ +L G QVH+ IK SN V+N ++
Sbjct: 222 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLI 281
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y K L+ +A+K+FD M+ N++++NAMI G++ L +EAL +F +
Sbjct: 282 DMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKL-----------SEALELFHE 330
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ P L TF S+L + + L ALE +QIH L +K G D+ G+AL+++Y KC
Sbjct: 331 MRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSY 390
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A VF EM+ + ++ W +M G+ H + +AL+L+ + + +PN+ TF + A
Sbjct: 391 VKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITA 450
Query: 499 CSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
SN A + + + ++++ P + + L+DM+ + G IEEA + +
Sbjct: 451 ASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR-DV 507
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDIFVSAGRWED 609
V W+ I+ +HG E +++K ++P + ++ +L AG ED
Sbjct: 508 VCWNSMISTHAQHGEAEEALGMFREMMKEGIQP-NYVTFVAVLSACSHAGXVED 560
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 131/443 (29%), Positives = 230/443 (51%), Gaps = 28/443 (6%)
Query: 157 ELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ VF+D+ ++G +P L + + AC+ L + G Q+H +VV+ + D VG S
Sbjct: 18 EEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTS 77
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L YS G + A F+++ EK ++WTT+I + G + L F++M + P+
Sbjct: 78 LIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPD 137
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ ++S+ S C + L G Q+H+ ++ G ++ V N ++ Y KC V +KLFD
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M N+++W MI+G+ Q ++ EA+ +F ++N G KPD + +S+L
Sbjct: 198 QMVVKNIISWTTMISGYMQ-----------NSFDWEAMKLFGEMNRLGWKPDGFACTSVL 246
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
T C L ALEQG Q+HA T+K S+ V L++MY K + A +VF M+ + +I
Sbjct: 247 TSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVI 306
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
S+ +MI G+++ +AL+LF +M + P+ +TFV L V +L E+
Sbjct: 307 SYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLG-------VSASLFALELS 359
Query: 516 QKEY----KIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
++ + K +D + LID++ + +++A ++M+ E + V+W+ G +
Sbjct: 360 KQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQ 418
Query: 570 HGNME--LGFYAAEQLLKLKPKD 590
H E L Y+ Q + KP +
Sbjct: 419 HLENEEALKLYSTLQFSRQKPNE 441
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 118/211 (55%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++VSLL + +L ++ IH I+K G D F + L++VY KC +++A+ VF+ +
Sbjct: 342 TFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 401
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
++V W ++ GY Q+ + E A+ ++ + + P T +TA S+L S+R G+
Sbjct: 402 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q H +VK + V N+L +Y+ CGS+ A K FN ++V+ W ++I ++G
Sbjct: 462 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 521
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
EA + L F +M+ EGIQPN T ++ S C
Sbjct: 522 EAEEALGMFREMMKEGIQPNYVTFVAVLSAC 552
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 1/177 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ N SL + + H +VK G FV LV++Y KCG++EEA+K+F++
Sbjct: 443 TFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSS 502
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VV W S+IS + Q+ + E A+ +F +M++ G P VT L+ACS + G
Sbjct: 503 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGL 562
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
+ + + T + SL G L A + ++ E + W +++ AC
Sbjct: 563 NHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSAC 619
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/579 (33%), Positives = 329/579 (56%), Gaps = 18/579 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ +S+ +GK H + + DT N L +LY+ CG + A F+ + +++
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+I +GE VQ L+ FS+M EG +EFTL+S C ++ Q+H++
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+KL SN V +I+ +Y KC ++ +A +F+ M LVTW+++ AG+ Q
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQ------- 236
Query: 362 DLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
NG EAL +F G++ +T S+IL+ C+ L +G Q+HA+ LK GF
Sbjct: 237 -----NGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFH 291
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ V +LV++Y +CG+IE+A +F M + ++ W +MI F+ H+ S +A+ LFE M
Sbjct: 292 GNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKM 351
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
G+ PN+VT++ L+ CS+AG+V + YF ++ + ++P + HY C++D+ R G
Sbjct: 352 QQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGK 411
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+EA++ + KM FEP +W + CR + N+ L AAEQL +L+P + ++ +L ++
Sbjct: 412 TDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNV 471
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ ++G WE+V + + ++ + SWI K KV+ F + HP+ +I+ L+E+
Sbjct: 472 YAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLEEI 531
Query: 661 VEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
+ + F + +L D +E +HSEKLA++FGL++ P PI++ K+ +C
Sbjct: 532 YHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLRIC 591
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH+F+KI +T R +IVRD+ R H F +G C+C DF
Sbjct: 592 GDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDF 630
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 208/400 (52%), Gaps = 15/400 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ S+ LQ C RKSL + H + G D L+N+Y KCG + A+ V
Sbjct: 55 IDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLV 114
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + ++VSW ++I+GY + + A+ +F M G + + TL + + AC++ +I
Sbjct: 115 FDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAI 174
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
KQ+H +K + ++ VG ++ +Y+ C + A F ++ E+ +++W+++
Sbjct: 175 NECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGY 234
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV-GAQVHSLGIKLGYASN 310
+NG + L F EG++ EFTL++I S C + L+L++ G Q+H++ +K G+ N
Sbjct: 235 VQNGLHEEALHLFRCAQREGVELTEFTLSAILSACAS-LALKIEGIQLHAVILKCGFHGN 293
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V S++ +Y +CG +++A LF M H N+V WNAMIA S H
Sbjct: 294 FFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIA-----------SFSRHAHSW 342
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTAL 429
EA+ +F K+ G+ P+ T+ S+L++CS +E+G +L + + +V+ + +
Sbjct: 343 EAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCM 402
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHS 468
V++ + G+ + A + +M S W S++ N++
Sbjct: 403 VDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYN 442
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 131/271 (48%), Gaps = 1/271 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + + S + C + +++ + +H +K + FV T +++VY KC +++
Sbjct: 152 EGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKD 211
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF+ +P +V+W+SL +GYVQN E A+H+F G T TL L+AC+S
Sbjct: 212 ACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACAS 271
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L G Q+HA ++K + V SL +Y+ CG + A F + KNV+ W +
Sbjct: 272 LALKIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAM 331
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + + + + + F KM GI PNE T S+ SVC + G SL +
Sbjct: 332 IASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRT 391
Query: 308 ASNLRVRNSIMYLYL-KCGLVDEAQKLFDGM 337
+ S M L + G DEA +L + M
Sbjct: 392 VEPNVLHYSCMVDVLGRSGKTDEAWELLNKM 422
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D+ S L +C++ +L G+ H L + G ++D + L+N+Y KCGR + A VF
Sbjct: 56 DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
M R+++SW +MI G+ + QAL+LF M G ++ T + AC+ +
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175
Query: 507 EALGYFEMMQKEYKIKPVMDHY----MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
E + +K +D ++D++ + I++A +KM E V WS
Sbjct: 176 ECKQLHTI-----ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSS 229
Query: 563 FIAGCRRHGNME 574
AG ++G E
Sbjct: 230 LFAGYVQNGLHE 241
>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
Length = 805
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/703 (31%), Positives = 364/703 (51%), Gaps = 30/703 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG + +VS+L C + + L+ +IH V+ G V + LV++YG+CG+
Sbjct: 119 ILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGS 178
Query: 125 MEEAQKVFDNLPR-INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ +A +F +L R ++VV W ++I+ QN P A+ +F ML+ G P VT +
Sbjct: 179 LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFK 238
Query: 184 ACSSLESIRLG--KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
ACSS S+R K H + + D V +L + Y+ CG ++ A + F + E+N
Sbjct: 239 ACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARCGEIDCAREFFAAMPERNA 298
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT++I A + G + + F ML EG+ P TL + C + + R+ V ++
Sbjct: 299 VSWTSMIAAFAQIGH-LLAVETFHAMLLEGVVPTRSTLFAALEGCEDLHTARL---VEAI 354
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF----DGMSHVNLVTWNAMIAGHAQMMD 357
++G A+++ + ++ Y +C ++A ++F +G LVT AMIA +AQ D
Sbjct: 355 AQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREEGEWDAALVT--AMIAVYAQCRD 412
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
++ G+ PD + + L C+ L AL +G QIHA
Sbjct: 413 R-----------RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAAD 461
Query: 418 GFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
L DV +G A+V+MY +CG + A F M R ISW +M++ A H L
Sbjct: 462 RRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDL 521
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F ML G +V F+ L+AC++AG+V +F M ++ + P +HY C++D+
Sbjct: 522 FRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLG 581
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G + +A ++ M P+ W + CR +G+ E G +AAE++L+L+ +Y
Sbjct: 582 RKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLELRANHTAAYVA 641
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L +I+ +AGRWED A V+ + + L + S I I+ KV+ F D HPQS I+
Sbjct: 642 LCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAE 701
Query: 657 LDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
L+ ++ + GY+ L D +E +HSEKLAIAFG+++TP S + V+K+
Sbjct: 702 LERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGSTLRVIKN 761
Query: 712 TTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN K I+ + REI+VRD +R H F +G C+C D+
Sbjct: 762 LRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDY 804
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 242/512 (47%), Gaps = 33/512 (6%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH-QDFFVMTFLVNVYGKCGNMEEAQKV 131
+++ V L++EC S++ +++H+ I + S +D ++ + LV +Y +CG++E A V
Sbjct: 28 DSAAAVRLVREC---NSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDV 84
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F + ++V WT LIS YV AI +F +L+ G + + L+ACSS E +
Sbjct: 85 FHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFL 144
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGA 250
G+ IH V+ V ++L S+Y CGSL A F + R +V+ W +I A
Sbjct: 145 AAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITA 204
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV---HSLGIKLGY 307
+NG + L F +ML GI P+ T S+ C + SLR +QV H+ + G
Sbjct: 205 NSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLR-ASQVKGFHTCLDETGL 263
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S++ V +++ Y +CG +D A++ F M N V+W +MIA AQ+
Sbjct: 264 GSDVVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQI------------ 311
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G A+ F + G+ P T + L C L + A+ + G +DV + T
Sbjct: 312 GHLLAVETFHAMLLEGVVPTRSTLFAALEGCED---LHTARLVEAIAQEIGVATDVAIVT 368
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISW-----TSMITGFANHSLSHQALQLFEDMLL 482
LV Y +C E A RVF S R W T+MI +A +L+ +
Sbjct: 369 DLVMAYARCDGQEDAIRVF---SAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIE 425
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
G+ P+++ ++ AL AC++ + E + + ++ + ++ M+ + G +
Sbjct: 426 RGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLR 485
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+A D M +E+ W+ ++ +HG +E
Sbjct: 486 DARDAFDGMPAR-DEISWNAMLSASAQHGRVE 516
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/751 (30%), Positives = 375/751 (49%), Gaps = 68/751 (9%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ S+ L ++ +LS A + ++ T LV + G + +A
Sbjct: 57 LHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAF 116
Query: 132 FDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSL 188
FD +P R + V +++S + + S A+ VF +L +G+ P + + ++A +
Sbjct: 117 FDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTALISAVGQM 176
Query: 189 ESIRLGK--QIHAYVVKYQTEDDTSVGNSLCSLYSTC----------------------- 223
++ Q+H V+K SV N+L +LY C
Sbjct: 177 HNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEMPDKDDLT 236
Query: 224 -----------GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
G +N+A F + K + W +I ++G F +M+SE +
Sbjct: 237 WTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKV 296
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY----ASNLRVRNSIMYLYLKCGLVD 328
+EFT TS+ S C G VH I+L + L V N+++ LY K G +
Sbjct: 297 PLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIV 356
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGH--AQMMDLA---------KDDLS--------AHNGG 369
A+++FD M+ ++V+WN +++G+ + +D A K+DLS H G
Sbjct: 357 IAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGL 416
Query: 370 TE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+E AL +F+++ + +KP YT++ + C L AL+ G Q+HA ++ GF + G A
Sbjct: 417 SEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNA 476
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+ MY KCG + A VF+ M +SW +MI+ H +AL+LF+ M+ G+ P+
Sbjct: 477 LLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPD 536
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+++F+ L AC++AG+V E YFE M++++ I P DHY LID+ R G I EA D I
Sbjct: 537 RISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLI 596
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K M FEP IW ++GCR +G+ME G YAA+QL ++ P+ +Y +L + + +AGRW
Sbjct: 597 KTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWV 656
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
D A V+ L R+ + + SWI + K++ F D HP++ E+++ L+ + + + G
Sbjct: 657 DAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLG 716
Query: 669 YKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y F L D E HSEKLA+ FGLL P + + V+K+ +C DCH +
Sbjct: 717 YVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICGDCHTAMM 776
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ REI+VRD +R H F +G C+C ++
Sbjct: 777 FMSKAVGREIVVRDVRRFHHFKDGECSCGNY 807
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 144/331 (43%), Gaps = 37/331 (11%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH----QDFFVMT 113
F+ +++E + ++ S+L C N + + +H I++ + V
Sbjct: 284 AFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNN 343
Query: 114 FLVNVYGKCGNMEEAQKVFDN-------------------------------LPRINVVS 142
LV +Y K G + A+++FD +P N +S
Sbjct: 344 ALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLS 403
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
W ++SGYV E A+ +F M P + T A+ AC L +++ G+Q+HA++V
Sbjct: 404 WMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLV 463
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
+ E S GN+L ++Y+ CG++N A F + + +SW +I A G++G + L
Sbjct: 464 QCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALE 523
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLY 321
F +M++EGI P+ + +I + C + G S+ G + ++ L
Sbjct: 524 LFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLL 583
Query: 322 LKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ G + EA+ L M W A+++G
Sbjct: 584 GRSGRIGEARDLIKTMPFEPTPSIWEAILSG 614
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/616 (34%), Positives = 328/616 (53%), Gaps = 62/616 (10%)
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
V+ D ++ L YS G + A F+R EKNV+ + +I + N V+
Sbjct: 62 VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L F MLS P+ +T + C + +LRVG QVH +K+G +NL + N+++ +
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAM 181
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ------MMDLAK--DDLSA-HNGGT- 370
Y KCG + EA+K+ D M + ++V+WN+M+AG+AQ +++ K D L+ H+ GT
Sbjct: 182 YGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTM 241
Query: 371 -----------------------------------------------EALSIFSKLNSSG 383
EA+S+F ++ G
Sbjct: 242 ASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECG 301
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
MKPD T +S+L C L AL G ++H K ++++ AL++MY KCG +E A
Sbjct: 302 MKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEAR 361
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
VF +M R ++SWTSM++ + + A+ LF ML +G P+ + FV L+ACS+ G
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
++ + YF MM ++Y I P ++H+ C++D+F R G +EEA+ FIK+M EPNE +W
Sbjct: 422 LLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGAL 481
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
++ CR H M++G AA+ L +L PK Y +L +I+ AG W+DV V+ ++ +
Sbjct: 482 LSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIK 541
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-KQQES----FELT 678
+ S + + +V++F D HPQ+ I+ LD LV K K GY Q ES E+
Sbjct: 542 KVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVE 601
Query: 679 DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDS 738
D+E HSEKLAI F +LNT +PI + K+ +C DCH IK+I+ + +R IIVRD
Sbjct: 602 DKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDC 661
Query: 739 KRLHKFVNGHCTCRDF 754
R H F NG C+C D+
Sbjct: 662 NRFHHFSNGICSCGDY 677
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 205/445 (46%), Gaps = 49/445 (11%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C +L +H IVK G + F+ LV +YGKCG + EA+KV D +
Sbjct: 139 TFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P +VVSW S+++GY Q+ Q AL C ++S+ L
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQ----------------------FDDALEICKEMDSLNL-- 234
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+ S+ +C Y++ ++ F R+ +KN++SW +I N
Sbjct: 235 -------NHDAGTMASLSPVVC--YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNS 285
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + F +M G++P+ T+ S+ CG + +L +G ++H K NL + N
Sbjct: 286 MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLEN 345
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG ++EA+ +FD M ++V+W +M++ + + G +A+++
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGR-----------SGQGYDAVAL 394
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYK 434
F+K+ SG PD F S+L+ CS L+QG +T + G + + +V+++
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFG 454
Query: 435 KCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+ G +E A +M W ++++ H S + L LL + P Q +
Sbjct: 455 RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH--SKMDIGLVAADLLFQLAPKQSGYY 512
Query: 494 GALAAC-SNAGMVYEALGYFEMMQK 517
L+ + AGM + + M+K
Sbjct: 513 VLLSNIYAKAGMWKDVMNVRYAMKK 537
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 6/198 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EA+S+ + G K + SLL C + +L +H +I K + + L
Sbjct: 288 NEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENAL 347
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCG +EEA+ VFD + +VVSWTS++S Y ++ Q A+ +F ML++G P +
Sbjct: 348 LDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDS 407
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ + L+ACS + G+ + +Y + L+ G + A
Sbjct: 408 IAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIK 467
Query: 235 RI-REKNVMSWTTVIGAC 251
++ E N W ++ AC
Sbjct: 468 QMPMEPNERVWGALLSAC 485
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/580 (34%), Positives = 331/580 (57%), Gaps = 18/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC ++R G+++HA+++K + T + L Y C L A K + + EKNV
Sbjct: 58 LNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 117
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT +I + G + + L F++M+ +PNEFT ++ + C L +G Q+H L
Sbjct: 118 VSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGL 177
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K Y S++ V +S++ +Y K G ++EA+++F+ + ++V+ A+IAG+AQ L D
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQ---LGLD 234
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL +F +L S GM+P+ T++S+LT S L L+ G+Q H L+
Sbjct: 235 E--------EALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 286
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
V+ +L++MY KCG + A R+F M RT ISW +M+ G++ H L + L+LF M
Sbjct: 287 YAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 346
Query: 482 -LAGVRPNQVTFVGALAACSNAGMVYEALGYFE-MMQKEYKIKPVMDHYMCLIDMFVRLG 539
V+P+ VT + L+ CS+ M L ++ M+ EY IKP +HY C++DM R G
Sbjct: 347 DEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAG 406
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
I+EAF+FIK+M +P + + CR H ++++G Y +L++++P++ +Y +L +
Sbjct: 407 RIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSN 466
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ SAGRWEDV V+ + ++ +++ SWI+ + ++ F ND HP+ E+ + E
Sbjct: 467 LYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKE 526
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ K K GY S L D +E + HSEKLA+ FGL+ T PI V K+ +
Sbjct: 527 ISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGEGIPIRVFKNLRI 586
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHNF KI + + RE+ +RD R H+ V G C+C D+
Sbjct: 587 CVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDY 626
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 205/398 (51%), Gaps = 15/398 (3%)
Query: 59 FQEAL-SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
QEAL ++ GP++ Y +LL C+++++L + +HAH++KT ++ T L+
Sbjct: 35 LQEALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLI 94
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
YGKC +E+A+KV D +P NVVSWT++IS Y Q A+ VF +M+ + P T
Sbjct: 95 FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFT 154
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
T LT+C + LGKQIH +VK+ + VG+SL +Y+ G + A + F +
Sbjct: 155 FATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
E++V+S T +I + G + L F ++ SEG++PN T S+ + + L G Q
Sbjct: 215 ERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ 274
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
H ++ ++NS++ +Y KCG + AQ+LFD M ++WNAM+ G+
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGY----- 329
Query: 358 LAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIH--ALT 414
S H G E L +F + + +KPD T ++L+ CS + G I+ +
Sbjct: 330 ------SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVA 383
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ G D +V+M + GRI+ A M ++
Sbjct: 384 GEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 46/246 (18%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G + + + ++L C AL +G+++HA +KT +L + T L+ Y KC +E A
Sbjct: 46 GPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 105
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+V EM + ++SWT+MI+ ++ S +AL +F +M+ + +PN+ TF L +C A
Sbjct: 106 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRA 165
Query: 503 ----------GMV------------------YEALGYFEMMQKEYKIKPVMDHYMC--LI 532
G++ Y G E ++ ++ P D C +I
Sbjct: 166 SGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAII 225
Query: 533 DMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCR-----RHGNM--------ELG 576
+ +LG EEA + +++ E PN V ++ + HG EL
Sbjct: 226 AGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 285
Query: 577 FYAAEQ 582
FYA Q
Sbjct: 286 FYAVLQ 291
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 334/579 (57%), Gaps = 17/579 (2%)
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
A+TAC ++ G+Q+HA ++ + +G L ++Y CG+L+ A +R+ E++
Sbjct: 16 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 75
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+SWTT+I + V+ L F KML G PNE+TL ++ + C S+ G QVHS
Sbjct: 76 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 135
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L +K + S++ V +S++ +Y K + EA+++FD + ++V+ A+I+G+AQ
Sbjct: 136 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK---GL 192
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
D+ EAL +F +L S GM+ + TF++++T S L +L+ G+Q+HAL L+
Sbjct: 193 DE--------EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 244
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
V + +L++MY KCG++ + RVF M R+++SW +M+ G+ H L H+ + LF+D
Sbjct: 245 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD- 303
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
L V+P+ VT + L+ CS+ G+V E L F+ + KE HY C+ID+ R G
Sbjct: 304 LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGR 363
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+E+A + I+ M FE IW + CR H N+ +G A++LL+++P++ +Y +L +I
Sbjct: 364 LEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNI 423
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ +AG W+DV V+ L E+ +++ SWI + +++F ++ HP +I + E+
Sbjct: 424 YAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 483
Query: 661 VEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
K G+ S L D +E + HSEKLAI FGL+NTP I V+K+ +C
Sbjct: 484 FVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRIC 543
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHNF K ++ + REI +RD R H +G+CTC D+
Sbjct: 544 VDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDY 582
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 217/406 (53%), Gaps = 16/406 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + Y + + C+ R++L +HA ++ F+ T LV +Y +CG +++A
Sbjct: 5 GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ V D +P +VVSWT++ISGY Q + A+ +F+ ML AG P TL T LT+CS
Sbjct: 65 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+SI GKQ+H+ +VK E VG+SL +Y+ ++ A + F+ + E++V+S T +I
Sbjct: 125 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 184
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G + L F ++ SEG+Q N T T++ + + SL G QVH+L ++
Sbjct: 185 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 244
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ ++NS++ +Y KCG + ++++FD M ++V+WNAM+ G+ + H
Sbjct: 245 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR-----------HGL 293
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK--TGFLSDVVVG 426
G E +S+F L+ +KPD T ++L+ CS +++G I +K + L G
Sbjct: 294 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG 352
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSH 471
++++ + GR+E+A + M + S W S++ H+ H
Sbjct: 353 -CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVH 397
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G + + + +T C AL +G Q+HA + + V +GT LV MY +CG ++ A
Sbjct: 5 GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 64
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
V M R+++SWT+MI+G++ +AL LF ML AG PN+ T L +CS
Sbjct: 65 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 124
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEA---FDFIKKMD 552
+Y+ ++ +K + +M L+DM+ + I+EA FD + + D
Sbjct: 125 QSIYQGKQVHSLL-----VKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERD 176
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 334/579 (57%), Gaps = 17/579 (2%)
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
A+TAC ++ G+Q+HA ++ + +G L ++Y CG+L+ A +R+ E++
Sbjct: 48 AITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERS 107
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+SWTT+I + V+ L F KML G PNE+TL ++ + C S+ G QVHS
Sbjct: 108 VVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHS 167
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L +K + S++ V +S++ +Y K + EA+++FD + ++V+ A+I+G+AQ
Sbjct: 168 LLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQK---GL 224
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
D+ EAL +F +L S GM+ + TF++++T S L +L+ G+Q+HAL L+
Sbjct: 225 DE--------EALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 276
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
V + +L++MY KCG++ + RVF M R+++SW +M+ G+ H L H+ + LF+D
Sbjct: 277 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD- 335
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
L V+P+ VT + L+ CS+ G+V E L F+ + KE HY C+ID+ R G
Sbjct: 336 LHKEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGR 395
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+E+A + I+ M FE IW + CR H N+ +G A++LL+++P++ +Y +L +I
Sbjct: 396 LEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNI 455
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ +AG W+DV V+ L E+ +++ SWI + +++F ++ HP +I + E+
Sbjct: 456 YAAAGMWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEI 515
Query: 661 VEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
K G+ S L D +E + HSEKLAI FGL+NTP I V+K+ +C
Sbjct: 516 FVDIKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRIC 575
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHNF K ++ + REI +RD R H +G+CTC D+
Sbjct: 576 VDCHNFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDY 614
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 123/406 (30%), Positives = 217/406 (53%), Gaps = 16/406 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + Y + + C+ R++L +HA ++ F+ T LV +Y +CG +++A
Sbjct: 37 GASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDA 96
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ V D +P +VVSWT++ISGY Q + A+ +F+ ML AG P TL T LT+CS
Sbjct: 97 RNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGP 156
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+SI GKQ+H+ +VK E VG+SL +Y+ ++ A + F+ + E++V+S T +I
Sbjct: 157 QSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAII 216
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G + L F ++ SEG+Q N T T++ + + SL G QVH+L ++
Sbjct: 217 SGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELP 276
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ ++NS++ +Y KCG + ++++FD M ++V+WNAM+ G+ + H
Sbjct: 277 FFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGR-----------HGL 325
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK--TGFLSDVVVG 426
G E +S+F L+ +KPD T ++L+ CS +++G I +K + L G
Sbjct: 326 GHEVISLFKDLHKE-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYG 384
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSH 471
++++ + GR+E+A + M + S W S++ H+ H
Sbjct: 385 -CIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVH 429
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 161/315 (51%), Gaps = 15/315 (4%)
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
V LR S M G + + C +L G QVH+ I Y + + +
Sbjct: 24 VAPLRAASGMALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRL 83
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y++CG +D+A+ + D M ++V+W MI+G++Q EAL +F
Sbjct: 84 VTMYVRCGALDDARNVLDRMPERSVVSWTTMISGYSQT-----------ERHVEALDLFI 132
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
K+ +G P+ YT +++LT CS ++ QG+Q+H+L +KT F S + VG++L++MY K
Sbjct: 133 KMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSE 192
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
I+ A RVF + R ++S T++I+G+A L +AL LF + G++ N VTF +
Sbjct: 193 NIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVT 252
Query: 498 ACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
A S A + Y + +++KE + + LIDM+ + G + + M E +
Sbjct: 253 ALSGLASLDYGKQVHALILRKELPFFVALQN--SLIDMYSKCGKLLYSRRVFDNM-LERS 309
Query: 557 EVIWSVFIAGCRRHG 571
V W+ + G RHG
Sbjct: 310 VVSWNAMLMGYGRHG 324
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/646 (33%), Positives = 350/646 (54%), Gaps = 33/646 (5%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++ + K G + EA++VFD +P NVVSWTS++ GYV+N A +F M
Sbjct: 92 LISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSW 151
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V LG L ++ +L E D ++ Y G L+ A F+
Sbjct: 152 TVMLGGLLQEGRVDDARKL--------FDMMPEKDVVAVTNMIGGYCEEGRLDEARALFD 203
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++NV++WT ++ NG+ + F M + NE + T++ + G S R+
Sbjct: 204 EMPKRNVVTWTAMVSGYARNGKVDVARKLFEVM----PERNEVSWTAM--LLGYTHSGRM 257
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
+ SL + + IM L G VD+A+++F GM + TW+AMI + +
Sbjct: 258 -REASSLFDAMPVKPVVVCNEMIMGFGLN-GEVDKARRVFKGMKERDNGTWSAMIKVYER 315
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
EAL +F ++ G+ + + S+L++C L +L+ G+Q+HA
Sbjct: 316 -----------KGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQL 364
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+++ F D+ V + L+ MY KCG + RA +VF + ++ W SMITG++ H L +AL
Sbjct: 365 VRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEAL 424
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+F DM +GV P+ VTF+G L+ACS +G V E L FE M+ +Y+++P ++HY CL+D+
Sbjct: 425 NVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDL 484
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R + EA ++KM EP+ ++W + CR H ++L A E+L +L+PK+ Y
Sbjct: 485 LGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPY 544
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQSAEI 653
+L +++ GRW DV V++ + +++ SWI ++ KV+ F D HP+ I
Sbjct: 545 VLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPII 604
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD----EESASV-YHSEKLAIAFGLLNTPIVSPILV 708
K+L++L + GY SF L D E++ S+ YHSEKLA+A+GLL P PI V
Sbjct: 605 MKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRV 664
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+ +C DCH+ IK+I +T REII+RD+ R H F +GHC+C+D+
Sbjct: 665 MKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKDY 710
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/494 (24%), Positives = 224/494 (45%), Gaps = 63/494 (12%)
Query: 6 WAAAAACTLETKSRQPSSSLATLKD--KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEAL 63
W A A E +RQP +L + + +TVS+ S I+ NG EA
Sbjct: 58 WNAMVAAYFE--ARQPREALLLFEKMPQRNTVSWNGLISGHIK-NGM--------LSEAR 106
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAH---------------IVKTG---- 104
V P S+ S+++ V ++ AE + H +++ G
Sbjct: 107 RVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDD 166
Query: 105 --------SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
+D +T ++ Y + G ++EA+ +FD +P+ NVV+WT+++SGY +N +
Sbjct: 167 ARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKV 226
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNS 215
++A +F M E V+ L + +R + A VK V N
Sbjct: 227 DVARKLFEVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVK-----PVVVCNE 277
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ + G ++ A + F ++E++ +W+ +I G ++ L F +M EG+ N
Sbjct: 278 MIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALN 337
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+L S+ SVC ++ SL G QVH+ ++ + +L V + ++ +Y+KCG + A+++F+
Sbjct: 338 FPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFN 397
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
++V WN+MI G++Q H G EAL++F + SSG+ PD TF +L
Sbjct: 398 RFPLKDVVMWNSMITGYSQ-----------HGLGEEALNVFHDMCSSGVPPDDVTFIGVL 446
Query: 396 TICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT- 453
+ CS +++G E + K + LV++ + ++ A ++ +M
Sbjct: 447 SACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPD 506
Query: 454 LISWTSMITGFANH 467
I W +++ H
Sbjct: 507 AIVWGALLGACRTH 520
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 198/468 (42%), Gaps = 84/468 (17%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
++ + Y + G ++ A+KVFD LP V SW ++++ Y + QP A+ +F M
Sbjct: 26 SYAIACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKM---- 81
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+ +T N L S + G L+ A
Sbjct: 82 -----------------------------------PQRNTVSWNGLISGHIKNGMLSEAR 106
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F+ + ++NV+SWT+++ NG+ + R F M P++ ++ + G +
Sbjct: 107 RVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM------PHKNVVSWTVMLGGLLQ 160
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
RV L + + V N I Y + G +DEA+ LFD M N+VTW AM++
Sbjct: 161 EGRVD-DARKLFDMMPEKDVVAVTNMIGG-YCEEGRLDEARALFDEMPKRNVVTWTAMVS 218
Query: 351 GHAQ--MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL--YTFSSILTICSRLVALEQ 406
G+A+ +D+A+ + + + N L YT S + S L
Sbjct: 219 GYARNGKVDVAR----------KLFEVMPERNEVSWTAMLLGYTHSGRMREASSL----- 263
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
A+ +K VVV ++ + G +++A RVF M R +W++MI +
Sbjct: 264 ---FDAMPVKP-----VVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYER 315
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC-SNAGMVYEALGYFEMMQKEYKIKPVM 525
+AL LF M G+ N + + L+ C S A + + + ++++ E+
Sbjct: 316 KGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFD----Q 371
Query: 526 DHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
D Y+ LI M+V+ G + A + + + V+W+ I G +HG
Sbjct: 372 DLYVASVLITMYVKCGNLVRAKQVFNRFPLK-DVVMWNSMITGYSQHG 418
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 119/289 (41%), Gaps = 67/289 (23%)
Query: 321 YLKCGLVDEAQKLFD--GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
Y + G +D A+K+FD + H + +WNAM+A + + EAL +F K
Sbjct: 32 YARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQ-----------PREALLLFEK 80
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + V L++ + K G
Sbjct: 81 MPQR---------------------------------------NTVSWNGLISGHIKNGM 101
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A RVF M R ++SWTSM+ G+ + +A +LF M N V++ L
Sbjct: 102 LSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHM----PHKNVVSWTVMLGG 157
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
G V +A F+MM E + V + +I + G ++EA +M + N V
Sbjct: 158 LLQEGRVDDARKLFDMM-PEKDVVAVTN----MIGGYCEEGRLDEARALFDEMP-KRNVV 211
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE-SYAMLLDIFVSAGR 606
W+ ++G R+G +++ A +L ++ P+ E S+ +L + +GR
Sbjct: 212 TWTAMVSGYARNGKVDV----ARKLFEVMPERNEVSWTAMLLGYTHSGR 256
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/596 (35%), Positives = 329/596 (55%), Gaps = 22/596 (3%)
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
+A +H +KT S D FV + LVN Y K G + EA+K+FD +P N+VSWT++ISGY
Sbjct: 130 DARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYA 189
Query: 152 QNSQPELAIHVF-LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
+ A+ VF L L GN + L+A E + GKQ+H VVK +
Sbjct: 190 SKQMAKEALGVFGLMRLVEGNL-NEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFV 248
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
SV N+L ++Y+ CG+LN ++ F +KN ++W+ +I + G++ + L+ FSKM
Sbjct: 249 SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYA 308
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G P+EFTL + C + ++ G Q H +K GY + + +++ +Y K G +A
Sbjct: 309 GFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDA 368
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLY 389
+K FD + +LV W ++IAG+ Q NG EALS++ ++ + P+
Sbjct: 369 RKGFDFLLEPDLVLWTSIIAGYVQ------------NGKNEEALSMYGRMQMRKILPNEL 416
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T +S+L CS L ALEQG+QIHA T+K G ++ + +AL MY KCG +E +F M
Sbjct: 417 TMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRM 476
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R ++SW +MI+G + + +AL+LFE+M L G +P+ +TFV L+ACS+ G+V
Sbjct: 477 LQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGW 536
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
YF MM E+ + P ++HY C++D+ R G + EA +FI+ + +W + + CR
Sbjct: 537 AYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRN 596
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H N ELG YA E+L++L ++ +Y +L I+ + GR DV V+ + + + + S
Sbjct: 597 HCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCS 656
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV 685
WI +K V+ F D +HPQ EI + L + K GY+ ESASV
Sbjct: 657 WIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYR-------PGHESASV 705
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 281/587 (47%), Gaps = 49/587 (8%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF-FVMTFLVNVYGKCGNMEEAQKV 131
Q S+ +LL + ++KSL +I+HAHI+K ++ L+ Y KCG++ A+ V
Sbjct: 6 QNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLV 65
Query: 132 FDNLPRINVVSWTSLISGYVQNSQP--ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
F+NL NVVS+ LI G N + +F M+ P T TA
Sbjct: 66 FENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAA---- 121
Query: 190 SIRLG-----KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
++ LG +Q+H +K + DD VG+SL + Y G + A K F+R+ E+N++SW
Sbjct: 122 ALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSW 181
Query: 245 TTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
TT+I A + L F M L EG NEF TS+ S + G QVH + +
Sbjct: 182 TTMISGYASKQMAKEALGVFGLMRLVEG-NLNEFVFTSVLSALVCPEFVDSGKQVHCVVV 240
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G + V N+++ +Y KCG ++ + LF+ S N +TW+A+I G++Q D K
Sbjct: 241 KNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHK--- 297
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
AL +FSK++ +G P +T +L CS + A+E+G+Q H LK+G+ + +
Sbjct: 298 --------ALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQI 349
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
TALV+MY K G A + F + L+ WTS+I G+ + + +AL ++ M +
Sbjct: 350 YTATALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMR 409
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
+ PN++T L ACSN + E +Y + P + L M+ + G +EE
Sbjct: 410 KILPNELTMASVLKACSNLAAL-EQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEE 468
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRR--HGNMELGFYAAEQLLKLKP------------- 588
++M + + V W+ I+G + HG L + +L KP
Sbjct: 469 GVLIFRRM-LQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACS 527
Query: 589 ------KDCESYAMLLDIFVSAGRWEDVA-VVKNLTREEKLSETDDW 628
+ + M+ D F R E A +V L+R KL+E ++
Sbjct: 528 HMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEF 574
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 216/432 (50%), Gaps = 35/432 (8%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIK 231
P N + L + +S++ G+ +HA+++K + + N+L Y+ CG L+ A
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQG--LRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F ++ KNV+S+ +I NG L F +M++ I P+ T + +
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 290 LSLRVGA-QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
L A QVH LGIK ++ V +S++ Y K G V EA+KLFD M NLV+W M
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT--ICSRLVALEQ 406
I+G+A +AK EAL +F + + + F+S+L+ +C V +
Sbjct: 185 ISGYAS-KQMAK----------EALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFV--DS 231
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G+Q+H + +K G L V V ALV MY KCG + + +F S + I+W+++ITG++
Sbjct: 232 GKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQ 291
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL---GYFEMMQKEYKIKP 523
SH+AL+LF M AG P++ T VG L ACS+ + E GY E +I
Sbjct: 292 AGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYT 351
Query: 524 VMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFY 578
L+DM+ + G +A FDF+ EP+ V+W+ IAG ++G E L Y
Sbjct: 352 A----TALVDMYAKFGFTGDARKGFDFL----LEPDLVLWTSIIAGYVQNGKNEEALSMY 403
Query: 579 AAEQLLKLKPKD 590
Q+ K+ P +
Sbjct: 404 GRMQMRKILPNE 415
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/416 (29%), Positives = 207/416 (49%), Gaps = 21/416 (5%)
Query: 60 QEALSV-----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EAL V L EG + + S+L V + + + + +H +VK G + V+
Sbjct: 195 KEALGVFGLMRLVEG-NLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNA 253
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV +Y KCGN+ + +F+ N ++W++LI+GY Q A+ +F M AG P+
Sbjct: 254 LVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPS 313
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
TL L ACS + +I GKQ H Y++K E +L +Y+ G A K F+
Sbjct: 314 EFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFD 373
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E +++ WT++I +NG+ + L + +M I PNE T+ S+ C + +L
Sbjct: 374 FLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQ 433
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ IK G L +R+++ +Y KCG ++E +F M ++V+WNAMI+G
Sbjct: 434 GKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISG--- 490
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LS + G EAL +F ++ G KPD TF ++L+ CS + +++G +
Sbjct: 491 --------LSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMM 542
Query: 415 LKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMST--RTLISWTSMITGFANH 467
L V A +V++ + G++ A F+E + + W ++ NH
Sbjct: 543 FDEFCLVPRVEHYACMVDVLSRAGKLNEAKE-FIESAIIDHGMCLWRILLPACRNH 597
>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Brachypodium distachyon]
Length = 689
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/654 (31%), Positives = 349/654 (53%), Gaps = 20/654 (3%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F+ LVN+Y K A + P VVS+T+ ISG Q+++P A+ F ML
Sbjct: 46 FICAHLVNLYSKLDLPAAAASALASDPNPTVVSFTAFISGAAQHARPLAALSAFAAMLRV 105
Query: 170 GNYPTNVTLGTAL--TACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSL 226
G P + T +A AC+ +G QIHA +++ D V + +Y G L
Sbjct: 106 GLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCL 165
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A + F + +NV++W V+ +G ++ + + + G PN ++ + + C
Sbjct: 166 GLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKAYFGLREAGGMPNVVSVCAFFNAC 225
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ L +G Q H + G+ ++ V N+++ Y KC +A+ +FDGM N V+W
Sbjct: 226 AGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWC 285
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+MI +AQ H +AL+++ ++G +P + SS+LT C+ L+ L
Sbjct: 286 SMIVAYAQ-----------HGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNF 334
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G +HA+ +++ +++ V +ALV+MY KCG +E A +VF++M R L++W +MI G+A+
Sbjct: 335 GRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNLVTWNAMIGGYAH 394
Query: 467 HSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ AL +F+ M+ +G PN +T V + ACS G+ + F+ M++ + ++P
Sbjct: 395 IGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSRGGLTKDGYELFDTMRERFGVEPRT 454
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY C++D+ R G E A++ I++M P+ +W + C+ HG ELG A+E+L +
Sbjct: 455 EHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGALLGACKMHGKTELGRIASEKLFE 514
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P+D ++ +L ++ SAGRW + V+ + + + SWI K+ V+ F D
Sbjct: 515 LDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGIKKEPGCSWITWKNVVHVFYAKDT 574
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EESASVY-HSEKLAIAFGLLNT 700
H +++EI +L +L ++ + GY + L D E+ V+ HSEKLA+AFGL++
Sbjct: 575 KHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVEEEEKETEVFQHSEKLALAFGLIHI 634
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P PI + K+ +C DCH K ++ + REIIVRD+ R H F C+C+D+
Sbjct: 635 PPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVRDNNRFHYFKQFECSCKDY 688
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 210/428 (49%), Gaps = 18/428 (4%)
Query: 47 LNGNSEPVRSLGFQEALS-VLTEGPKVQTSSYVSLLQE--CVNRKSLSNAEIIHAHIVKT 103
++G ++ R L A + +L G + ++ S + C + + IHA ++
Sbjct: 83 ISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRF 142
Query: 104 GS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
G D FV +++Y K G + A+++F+ +P NV++W ++++ V + +P
Sbjct: 143 GYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAVMTNAVIDGRPLETFKA 202
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
+ + EAG P V++ AC+ + LG+Q H +VV + D SV N++ Y
Sbjct: 203 YFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSVSNAMVDFYGK 262
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
C A F+ +R +N +SW ++I A ++G L + + G +P +F ++S+
Sbjct: 263 CRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSV 322
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+ C +L L G +H++ ++ +N+ V ++++ +Y KCG V++A+++F M NL
Sbjct: 323 LTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDAEQVFLDMPERNL 382
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF-SKLNSSGMKPDLYTFSSILTICSRL 401
VTWNAMI G+A + D A N AL++F + + S G P+ T +++T CSR
Sbjct: 383 VTWNAMIGGYAHIGD-------AQN----ALAVFDAMIRSGGTSPNHITLVNVITACSRG 431
Query: 402 VALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTS 459
+ G E + + G +V++ + G ERA + M R IS W +
Sbjct: 432 GLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWGA 491
Query: 460 MITGFANH 467
++ H
Sbjct: 492 LLGACKMH 499
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 171/406 (42%), Gaps = 27/406 (6%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
LG A A S S RLG+ HA ++ + + L +LYS +A A
Sbjct: 12 LGAAFEAAISSRSPRLGRAAHARALRLLSPGLPPFICAHLVNLYSKLDLPAAAASALASD 71
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI--SSVCGTMLSLRV 294
V+S+T I ++ + L F+ ML G++PN+FT S ++ C V
Sbjct: 72 PNPTVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTV 131
Query: 295 GAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+H+L ++ GY + V + M +Y K G + A++LF+ M + N++ WNA+
Sbjct: 132 GPQIHALALRFGYLPGDPFVSCAAMDMYFKTGCLGLARRLFEEMPNRNVIAWNAV----- 186
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
M + D E + L +G P++ + + C+ + L GEQ H
Sbjct: 187 -MTNAVIDGRP-----LETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGF 240
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ GF DV V A+V+ Y KC +A VF M R +SW SMI +A H A
Sbjct: 241 VVTCGFDMDVSVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDA 300
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L ++ G P L C+ N G A+ + +
Sbjct: 301 LAVYMGARNTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASA---- 356
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
L+DM+ + G +E+A M E N V W+ I G G+ +
Sbjct: 357 --LVDMYGKCGGVEDAEQVFLDMP-ERNLVTWNAMIGGYAHIGDAQ 399
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/721 (31%), Positives = 380/721 (52%), Gaps = 33/721 (4%)
Query: 65 VLTEGP-KVQTSSYVSLLQECVNRKSLSNAEI---IHAHIVKTG---SHQDFFVMTFLVN 117
+L EG V + + VS+L C + + HA +K G ++ F L++
Sbjct: 159 MLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLS 218
Query: 118 VYGKCGNMEEAQKVFDNLPRI------NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+Y + G +++AQ +F +VV+W ++IS VQ + A+ V DM+ G
Sbjct: 219 MYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGV 278
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P VT +AL ACS LE + LG+++HA V+K ++ V ++L +Y+ + SA
Sbjct: 279 RPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASAR 338
Query: 231 KAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCG 287
+ F+ + E + + W +I + G + L FS+M +E G P+E T++ + C
Sbjct: 339 RVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACA 398
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+H +K G A N V+N++M +Y + G +D A+++F + ++V+WN
Sbjct: 399 RSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNT 458
Query: 348 MIAG-----HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
+I G HA ++ + + S + + P+ T ++L C+ L
Sbjct: 459 LITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALA 518
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
A +G++IH ++ SD+ VG+ALV+MY KCG + + VF + R +I+W +I
Sbjct: 519 APARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIM 578
Query: 463 GFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ H L +A+ LF++M G PN+VTF+ ALAACS++G+V L F M++++ +
Sbjct: 579 AYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGV 638
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE---VIWSVFIAGCRRHGNMELGFY 578
KP D + C++D+ R G ++EA+ I M EP E WS + CR H N+ELG
Sbjct: 639 KPTPDLHACVVDVLGRAGRLDEAYSIITSM--EPGEQQVSAWSSLLGACRLHRNVELGEV 696
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AAE+L +L+P + Y +L +I+ +AG W+ V+ R + +++ SWI + ++
Sbjct: 697 AAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIELDGAIH 756
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESASV--YHSEKLAI 693
F + HP SAE+ +D L E+ + GY S L D +E A++ YHSEKLAI
Sbjct: 757 RFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYHSEKLAI 816
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
AFGLL P + I V K+ +C DCH K ++ + R+I++RD +R H F +G C+C D
Sbjct: 817 AFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRDGSCSCGD 876
Query: 754 F 754
+
Sbjct: 877 Y 877
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 141/551 (25%), Positives = 242/551 (43%), Gaps = 100/551 (18%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP-TNVTLGTALTACSSL---ESIRLG 194
+ VS+ SLIS Q E A+ DML G + ++ TL + L ACS L + RLG
Sbjct: 132 DAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLG 191
Query: 195 KQIHAYVVKYQTEDDTSVG---NSLCSLYSTCGSLNSAIKAFNRIREK------NVMSWT 245
++ HA+ +K D+ N+L S+Y+ G ++ A F +V++W
Sbjct: 192 REAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWN 251
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK- 304
T+I + G + + M+S G++P+ T S C + L +G ++H++ +K
Sbjct: 252 TMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKD 311
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN--LVTWNAMIAGHAQM-MDLAKD 361
A+N V ++++ +Y V A+++FD + + L WNAMI G+AQ MD
Sbjct: 312 ADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMD---- 367
Query: 362 DLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
EAL +FS++ + +G P T S +L C+R E +H +K G
Sbjct: 368 --------EEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMA 419
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ V AL++MY + G ++ A R+F + R ++SW ++ITG + +A QL +M
Sbjct: 420 GNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEM 479
Query: 481 LLAGVR----------------PNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKI 521
L PN +T + L C A + A G KE Y +
Sbjct: 480 QLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGC--AALAAPARG------KEIHGYAV 531
Query: 522 KPVMDHYM----CLIDMFVRLGCI-------------------------------EEAFD 546
+ ++ + L+DM+ + GC+ +EA
Sbjct: 532 RHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVA 591
Query: 547 FIKKM----DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLD 599
+M + PNEV + +A C G ++ G F+ E+ +KP + +A ++D
Sbjct: 592 LFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTP-DLHACVVD 650
Query: 600 IFVSAGRWEDV 610
+ AGR ++
Sbjct: 651 VLGRAGRLDEA 661
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 123/393 (31%), Positives = 195/393 (49%), Gaps = 46/393 (11%)
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+VGN+L + Y+ CG L++A+ F ++ +S+ ++I A + + L ML
Sbjct: 101 AVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDML 160
Query: 269 SEGIQP-NEFTLTSISSVCGTML---SLRVGAQVHSLGIKLGYASNLRVR---NSIMYLY 321
+EG + FTL S+ C + R+G + H+ +K G+ R R N+++ +Y
Sbjct: 161 AEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMY 220
Query: 322 LKCGLVDEAQKLFDGMSHV------NLVTWNAMIAGHAQMMDLAKDDLSAHNGG--TEAL 373
+ GLVD+AQ LF + ++VTWN MI+ Q GG EA+
Sbjct: 221 ARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQ-------------GGRCAEAV 267
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNM 432
+ + S G++PD TF+S L CSRL L G ++HA+ LK L ++ V +ALV+M
Sbjct: 268 EVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDM 327
Query: 433 YKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRPNQ 489
Y ++ A RVF V +R L W +MI G+A + +AL+LF M AG P++
Sbjct: 328 YAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSE 387
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM--DHYM--CLIDMFVRLGCIEEAF 545
T G L AC+ + E E M Y +K M + ++ L+DM+ RLG ++ A
Sbjct: 388 TTMSGVLPACARS----EGFAGKEAMHG-YVVKRGMAGNRFVQNALMDMYARLGEMDVAR 442
Query: 546 DFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGF 577
+D P +V+ W+ I GC G+ F
Sbjct: 443 RIFAMID--PRDVVSWNTLITGCVVQGHAAEAF 473
>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
Length = 734
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 350/673 (52%), Gaps = 54/673 (8%)
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE--AGNYPTNVTLGTA 181
+ A +VFD P ++ +WTS+ISG + + + F +ML+ P L
Sbjct: 73 GLHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGV 132
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ L + G++IH ++++ D + N++ +Y+ CG A +AF + +K+
Sbjct: 133 LRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDA 192
Query: 242 MSWTTVIGACGENGEAVQGLRFFS-------------------------------KMLSE 270
SW VI AC ++G+ V + F +M+
Sbjct: 193 TSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRA 252
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G+ + +T + + ++ G + S +G Q+H + + V S+M +Y KCG ++ A
Sbjct: 253 GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESA 312
Query: 331 QKLFDGMSHV---NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKP 386
+FD S W+ M+AG+ Q NG E AL F ++ G+
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQ------------NGREEEALEFFRRMLREGVPA 360
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ +S+ + C+ +EQG Q+H K G D + +A+V+MY K G +E A R+F
Sbjct: 361 GQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIF 420
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
T+ + WT+M+ +A+H AL++F M + PN++T V L+ACS++G+V
Sbjct: 421 RSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVS 480
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ YF +MQ+EY I P +HY C++D++ R G +++A +FI++ V+W ++
Sbjct: 481 DGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSA 540
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR H ++E A+E+L++L+ D SY ++ +++ + +W D +++ +E ++ +
Sbjct: 541 CRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQP 600
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EE 681
SWI +K+ V+ F D HP+SAEI+ L++L+E+ K GY + + D E
Sbjct: 601 GQSWIHLKNVVHRFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRE 660
Query: 682 SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
++ +HSEKLAIAFG+++TP+ + + + K+ +C DCH IK IT T REI+VRD R
Sbjct: 661 TSLKFHSEKLAIAFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRF 720
Query: 742 HKFVNGHCTCRDF 754
H F +G C+C DF
Sbjct: 721 HHFKDGQCSCEDF 733
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 202/449 (44%), Gaps = 51/449 (11%)
Query: 58 GFQEALSVLTEGPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
G + +L E +++V +L+ C + + IH I+++G D + +
Sbjct: 108 GMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAV 167
Query: 116 VNVYGKCGNMEEAQK-------------------------------VFDNLPRINVVSWT 144
+++Y KCG+ A++ +FD +V SW
Sbjct: 168 LDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLRDVSSWN 227
Query: 145 SLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
+++SG +++ A+ M+ AG +N T L S LG+Q+H VV
Sbjct: 228 TIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVA 287
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR---IREKNVMSWTTVIGACGENGEAVQGL 261
E+D VG SL +Y CG + SA+ F+R E +W+T++ +NG + L
Sbjct: 288 VLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEAL 347
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
FF +ML EG+ +F LTS++S C + G QVH KLG+ + + ++I+ +Y
Sbjct: 348 EFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMY 407
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
K G +++A ++F N+ W M+ +A +H G AL IFS++ +
Sbjct: 408 SKSGSLEDACRIFRSAQTKNVALWTTMLCSYA-----------SHGQGRMALEIFSRMKA 456
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIE 440
+ P+ T ++L+ CS + G L + G + + +V++Y + G ++
Sbjct: 457 EKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLD 516
Query: 441 RASRVFVEMS--TRTLISWTSMITGFANH 467
+A + F+E + + + W ++++ H
Sbjct: 517 KA-KNFIEENKISHEAVVWKTLLSACRLH 544
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 138/279 (49%), Gaps = 12/279 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD---NLPRINVVSWTSLISGYVQ 152
+H +V +D FV L+++Y KCG ME A +FD + +W+++++GYVQ
Sbjct: 280 LHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQ 339
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N + E A+ F ML G L + +AC++ + G+Q+H +V K D +
Sbjct: 340 NGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPL 399
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
+++ +YS GSL A + F + KNV WTT++ + +G+ L FS+M +E I
Sbjct: 400 ASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKI 459
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSL-GIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
PNE TL ++ S C + G +L + G N N ++ LY + GL+D+A+
Sbjct: 460 MPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAK 519
Query: 332 KLFD--GMSHVNLVTWNAMIAG-----HAQMMDLAKDDL 363
+ +SH V W +++ H + LA + L
Sbjct: 520 NFIEENKISH-EAVVWKTLLSACRLHKHIEYAQLASEKL 557
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 349/618 (56%), Gaps = 18/618 (2%)
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
W + + + Q A+ ++ ML G+ P T AL +C++L LG Q H +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF--NRIREKNVMSWTTVIGACGENGEAVQG 260
K + V L S+Y +++A K F N K + + ++ N +
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
+ F +M EG+ N TL + C + ++L +G+ +H +K G+ S++ V N + +
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL 379
Y+KCG V+ AQKLFD M L++WNAM++G+AQ NG T L ++ +
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQ------------NGLATNVLELYRNM 235
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ +G+ PD T +L+ C+ L A G ++ +GF S+ + AL+NMY +CG +
Sbjct: 236 DMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNL 295
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+A VF M RTL+SWT++I G+ H A+QLF++M+ +G+ P+ FV L+AC
Sbjct: 296 TKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSAC 355
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S+AG+ + L YF+MM++ Y+++P +HY C++D+ R G ++EA I+ M +P+ +
Sbjct: 356 SHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAV 415
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + C+ H N+EL A E++++L+P++ Y +L +I+ +A + V ++ + +E
Sbjct: 416 WGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKE 475
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL-VEKAKCFGYKQQESFELT 678
+KL + S++ +K +V+ F D H QS EI++VL+EL + FG ++++ E +
Sbjct: 476 KKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKPEKDNREES 535
Query: 679 DEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+++ + HSEKLA+AFGLLNT + ++++K+ +C DCH F K+++ + R++ VR
Sbjct: 536 NKDGFTRVGVHSEKLAVAFGLLNTTTGAEVVIIKNLRICEDCHLFFKMVSKIVHRQLTVR 595
Query: 737 DSKRLHKFVNGHCTCRDF 754
D+ R H F NG C+C+D+
Sbjct: 596 DATRFHHFRNGSCSCKDY 613
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 127/472 (26%), Positives = 220/472 (46%), Gaps = 21/472 (4%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F +ALS+ L G + ++ L+ C H I K G + FV T
Sbjct: 21 FLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTG 80
Query: 115 LVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+++Y K ++ A+KVF+ R V + +L+SGYV NS+ A+ +F M E G
Sbjct: 81 LISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAVLLFRQMNEEGVP 140
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+VTL + AC S ++ LG +H +KY + D SV N ++Y CGS+N A K
Sbjct: 141 VNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKL 200
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + K ++SW ++ +NG A L + M G+ P+ TL + S C + +
Sbjct: 201 FDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQ 260
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
VG +V G+ SN + N+++ +Y +CG + +AQ +FDGM LV+W A+I G+
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 320
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
H G A+ +F ++ SG++PD F +L+ CS +QG +
Sbjct: 321 GM-----------HGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFK 369
Query: 413 LTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLS 470
+ + L + +V++ + GR++ A + M + + W +++ H
Sbjct: 370 MMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNV 429
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
A FE ++ + P + + L+ + + + +M KE K+K
Sbjct: 430 ELAELAFERVI--ELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLK 479
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/616 (34%), Positives = 328/616 (53%), Gaps = 62/616 (10%)
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
V+ D ++ L YS G + A F+R EKNV+ + +I + N V+
Sbjct: 62 VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEA 121
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L F MLS P+ +T + C + +LRVG QVH +K+G +NL + N+++ +
Sbjct: 122 LSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAM 181
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ------MMDLAK--DDLSA-HNGGT- 370
Y KCG + EA+K+ D M + ++V+WN+M+AG+AQ +++ K D L+ H+ GT
Sbjct: 182 YGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTM 241
Query: 371 -----------------------------------------------EALSIFSKLNSSG 383
EA+S+F ++ G
Sbjct: 242 ASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECG 301
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
MKPD T +S+L C L AL G ++H K ++++ AL++MY KCG +E A
Sbjct: 302 MKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEAR 361
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
VF +M R ++SWTSM++ + + A+ LF ML +G P+ + FV L+ACS+ G
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
++ + YF MM ++Y I P ++H+ C++D+F R G +EEA+ FIK+M EPNE +W
Sbjct: 422 LLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGAL 481
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLS 623
++ CR H M++G AA+ L +L PK Y +L +I+ AG W+DV V+ ++ +
Sbjct: 482 LSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIK 541
Query: 624 ETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-KQQES----FELT 678
+ S + + +V++F D HPQ+ I+ LD LV K K GY Q ES E+
Sbjct: 542 KVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHDVEVE 601
Query: 679 DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDS 738
D+E HSEKLAI F +LNT +PI + K+ +C DCH IK+I+ + +R IIVRD
Sbjct: 602 DKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDC 661
Query: 739 KRLHKFVNGHCTCRDF 754
R H F NG C+C D+
Sbjct: 662 NRFHHFSNGICSCGDY 677
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 205/445 (46%), Gaps = 49/445 (11%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C +L +H IVK G + F+ LV +YGKCG + EA+KV D +
Sbjct: 139 TFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQM 198
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P +VVSW S+++GY Q+ Q AL C ++S+ L
Sbjct: 199 PYRDVVSWNSMVAGYAQSGQ----------------------FDDALEICKEMDSLNL-- 234
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+ S+ +C Y++ ++ F R+ +KN++SW +I N
Sbjct: 235 -------NHDAGTMASLSPVVC--YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNS 285
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + F +M G++P+ T+ S+ CG + +L +G ++H K NL + N
Sbjct: 286 MPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLEN 345
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG ++EA+ +FD M ++V+W +M++ + + G +A+++
Sbjct: 346 ALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGR-----------SGQGYDAVAL 394
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYK 434
F+K+ SG PD F S+L+ CS L+QG +T + G + + +V+++
Sbjct: 395 FAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFG 454
Query: 435 KCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+ G +E A +M W ++++ H S + L LL + P Q +
Sbjct: 455 RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH--SKMDIGLVAADLLFQLAPKQSGYY 512
Query: 494 GALAAC-SNAGMVYEALGYFEMMQK 517
L+ + AGM + + M+K
Sbjct: 513 VLLSNIYAKAGMWKDVMNVRYAMKK 537
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 61 EALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EA+S+ + G K + SLL C + +L +H +I K + + L+
Sbjct: 289 EAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALL 348
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG +EEA+ VFD + +VVSWTS++S Y ++ Q A+ +F ML++G P ++
Sbjct: 349 DMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSI 408
Query: 177 TLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ L+ACS + G+ + +Y + L+ G + A +
Sbjct: 409 AFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQ 468
Query: 236 I-REKNVMSWTTVIGAC 251
+ E N W ++ AC
Sbjct: 469 MPMEPNERVWGALLSAC 485
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 347/646 (53%), Gaps = 14/646 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N + VR G + + + G V SY S + C L+ +HAH +K D
Sbjct: 228 NEQYVR--GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T +V+VY K ++ +A++ F LP V + +++ G V+ A+ +F M+ +
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
V+L +AC+ + G+Q+H +K + D V N++ LY C +L A
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F +++K+ +SW +I A +NG + F++ML G++P++FT S+ C +
Sbjct: 406 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 465
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
SL G VH IK G S+ V ++++ +Y KCG++DEAQKL D + +V+WNA++
Sbjct: 466 RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAIL 525
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G S + EA FS++ G+KPD +TF+++L C+ L +E G+Q
Sbjct: 526 SG-----------FSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH +K L D + + LV+MY KCG + + VF ++ R +SW +MI G+A H L
Sbjct: 575 IHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGL 634
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL++FE M V PN TFV L ACS+ G+ + YF +M YK++P ++H+
Sbjct: 635 GVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA 694
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R +EA FI M F+ + VIW ++ C+ ++E+ AA +L L P
Sbjct: 695 CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPD 754
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D Y +L +++ +G+W DV+ + L ++ +L + SWI ++ +++ F D HP+
Sbjct: 755 DSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 814
Query: 650 SAEIFKVLDELVEKAKCFGYKQQE-SFELTDEESASVYHSEKLAIA 694
S E++++L++L+ + K GY+ SF DEE ++ H +L +A
Sbjct: 815 SGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLELLVA 860
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 272/522 (52%), Gaps = 27/522 (5%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQE++ + E G +++ LL+ C + LS +HA VKTG D +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++YGKC ++++A F +P N VSW + I+G VQN Q + +F++M G +
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVS 249
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ +A +C+++ + G+Q+HA+ +K + D VG ++ +Y+ SL A +AF
Sbjct: 250 QPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFF 309
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ V + ++ G ++ + F M+ I+ + +L+ + S C
Sbjct: 310 GLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 369
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G QVH L IK G+ ++ V N+++ LY KC + EA +F GM + V+WNA+IA Q
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ DD H F+++ GMKPD +T+ S+L C+ L +LE G +H
Sbjct: 430 --NGHYDDTILH---------FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKV 478
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+G SD V + +V+MY KCG I+ A ++ + + ++SW ++++GF+ + S +A
Sbjct: 479 IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQ 538
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLI 532
+ F +ML G++P+ TF L C+N + LG ++ + K + + D Y+ L+
Sbjct: 539 KFFSEMLDMGLKPDHFTFATVLDTCANLATI--ELGK-QIHGQIIKQEMLDDEYISSTLV 595
Query: 533 DMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
DM+ + G + ++ F+ ++K DF V W+ I G HG
Sbjct: 596 DMYAKCGDMPDSLLVFEKVEKRDF----VSWNAMICGYALHG 633
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 262/555 (47%), Gaps = 60/555 (10%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ Y G++ A +FD +P +VVSW +L+SGY Q + ++ +F++M G P
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L +CS+LE + LG Q+HA VK E D G++L +Y C SL+ A+ F
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E+N +SW I C +N + V+GL F +M G+ ++ + S C M L
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ IK ++S+ V +I+ +Y K + +A++ F G+ + + T NAM+ G
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG--- 325
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L + L G EA+ +F + S ++ D+ + S + + C+ QG+Q+H L
Sbjct: 326 ---LVRAGL-----GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+GF D+ V A++++Y KC + A +F M + +SW ++I + +
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM--DHYMC-- 530
F +ML G++P+ T+ L AC+ +L Y +M + IK + D ++
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACA----ALRSLEY-GLMVHDKVIKSGLGSDAFVAST 492
Query: 531 LIDMFVRLGCIEEA----------------------------------FDFIKKMDFEPN 556
++DM+ + G I+EA F + M +P+
Sbjct: 493 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY-AMLLDIFVSAGRWEDVAVVKN 615
++ + C +ELG Q++K + D E + L+D++ G D +V
Sbjct: 553 HFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF- 611
Query: 616 LTREEKLSETDDWSW 630
EK+ + D SW
Sbjct: 612 ----EKVEKRDFVSW 622
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 190/389 (48%), Gaps = 25/389 (6%)
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
DT N++ + YS G +++A+ F+ + + +V+SW ++ + G + + F +M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G+ P+ T + C + L +G QVH+L +K G ++R ++++ +Y KC +D
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+A F GM N V+W A IAG Q + L +F ++ G+
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVR-----------GLELFIEMQRLGLGVSQ 250
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+++S C+ + L G Q+HA +K F SD VVGTA+V++Y K + A R F
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+ T+ + +M+ G L +A+ LF+ M+ + +R + V+ G +AC+ E
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACA------ET 364
Query: 509 LGYFEMMQKE-YKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
GYF+ Q IK D +C ++D++ + + EA+ + M + + V W+
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAI 423
Query: 564 IAGCRRHGNMELGFYAAEQLLK--LKPKD 590
IA ++G+ + ++L+ +KP D
Sbjct: 424 IAALEQNGHYDDTILHFNEMLRFGMKPDD 452
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA------ 359
G+ N V N ++ +Y +C A+++FD M + V+WN M+ ++ D++
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 360 ----KDDLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
D+ + N E++ +F ++ G+ PD TF+ +L CS L L
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G Q+HAL +KTG DV G+ALV+MY KC ++ A F M R +SW + I G
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
+ + L+LF +M G+ +Q ++ A +C+
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 43/187 (22%)
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT-------------- 462
+GF+ + V L+ MY +C A RVF M R +SW +M+T
Sbjct: 46 SGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105
Query: 463 -----------------GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS----- 500
G+ + +++ LF +M GV P++ TF L +CS
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+ G+ AL ++ + + L+DM+ + +++A F M E N V W
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSA------LVDMYGKCRSLDDALCFFYGMP-ERNWVSW 218
Query: 561 SVFIAGC 567
IAGC
Sbjct: 219 GAAIAGC 225
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 347/646 (53%), Gaps = 14/646 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N + VR G + + + G V SY S + C L+ +HAH +K D
Sbjct: 228 NEQYVR--GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T +V+VY K ++ +A++ F LP V + +++ G V+ A+ +F M+ +
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
V+L +AC+ + G+Q+H +K + D V N++ LY C +L A
Sbjct: 346 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 405
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F +++K+ +SW +I A +NG + F++ML G++P++FT S+ C +
Sbjct: 406 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 465
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
SL G VH IK G S+ V ++++ +Y KCG++DEAQKL D + +V+WNA++
Sbjct: 466 RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAIL 525
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G S + EA FS++ G+KPD +TF+++L C+ L +E G+Q
Sbjct: 526 SG-----------FSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 574
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH +K L D + + LV+MY KCG + + VF ++ R +SW +MI G+A H L
Sbjct: 575 IHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGL 634
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL++FE M V PN TFV L ACS+ G+ + YF +M YK++P ++H+
Sbjct: 635 GVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA 694
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R +EA FI M F+ + VIW ++ C+ ++E+ AA +L L P
Sbjct: 695 CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPD 754
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D Y +L +++ +G+W DV+ + L ++ +L + SWI ++ +++ F D HP+
Sbjct: 755 DSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 814
Query: 650 SAEIFKVLDELVEKAKCFGYKQQE-SFELTDEESASVYHSEKLAIA 694
S E++++L++L+ + K GY+ SF DEE ++ H +L +A
Sbjct: 815 SGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLELLVA 860
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 272/522 (52%), Gaps = 27/522 (5%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQE++ + E G +++ LL+ C + LS +HA VKTG D +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++YGKC ++++A F +P N VSW + I+G VQN Q + +F++M G +
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVS 249
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ +A +C+++ + G+Q+HA+ +K + D VG ++ +Y+ SL A +AF
Sbjct: 250 QPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFF 309
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ V + ++ G ++ + F M+ I+ + +L+ + S C
Sbjct: 310 GLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 369
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G QVH L IK G+ ++ V N+++ LY KC + EA +F GM + V+WNA+IA Q
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ DD H F+++ GMKPD +T+ S+L C+ L +LE G +H
Sbjct: 430 --NGHYDDTILH---------FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKV 478
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+G SD V + +V+MY KCG I+ A ++ + + ++SW ++++GF+ + S +A
Sbjct: 479 IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQ 538
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLI 532
+ F +ML G++P+ TF L C+N + LG ++ + K + + D Y+ L+
Sbjct: 539 KFFSEMLDMGLKPDHFTFATVLDTCANLATI--ELGK-QIHGQIIKQEMLDDEYISSTLV 595
Query: 533 DMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
DM+ + G + ++ F+ ++K DF V W+ I G HG
Sbjct: 596 DMYAKCGDMPDSLLVFEKVEKRDF----VSWNAMICGYALHG 633
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 262/555 (47%), Gaps = 60/555 (10%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ Y G++ A +FD +P +VVSW +L+SGY Q + ++ +F++M G P
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L +CS+LE + LG Q+HA VK E D G++L +Y C SL+ A+ F
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E+N +SW I C +N + V+GL F +M G+ ++ + S C M L
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ IK ++S+ V +I+ +Y K + +A++ F G+ + + T NAM+ G
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG--- 325
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L + L G EA+ +F + S ++ D+ + S + + C+ QG+Q+H L
Sbjct: 326 ---LVRAGL-----GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 377
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+GF D+ V A++++Y KC + A +F M + +SW ++I + +
Sbjct: 378 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 437
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM--DHYMC-- 530
F +ML G++P+ T+ L AC+ +L Y +M + IK + D ++
Sbjct: 438 LHFNEMLRFGMKPDDFTYGSVLKACA----ALRSLEY-GLMVHDKVIKSGLGSDAFVAST 492
Query: 531 LIDMFVRLGCIEEA----------------------------------FDFIKKMDFEPN 556
++DM+ + G I+EA F + M +P+
Sbjct: 493 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY-AMLLDIFVSAGRWEDVAVVKN 615
++ + C +ELG Q++K + D E + L+D++ G D +V
Sbjct: 553 HFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF- 611
Query: 616 LTREEKLSETDDWSW 630
EK+ + D SW
Sbjct: 612 ----EKVEKRDFVSW 622
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 190/389 (48%), Gaps = 25/389 (6%)
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
DT N++ + YS G +++A+ F+ + + +V+SW ++ + G + + F +M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G+ P+ T + C + L +G QVH+L +K G ++R ++++ +Y KC +D
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+A F GM N V+W A IAG Q + L +F ++ G+
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVR-----------GLELFIEMQRLGLGVSQ 250
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+++S C+ + L G Q+HA +K F SD VVGTA+V++Y K + A R F
Sbjct: 251 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 310
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+ T+ + +M+ G L +A+ LF+ M+ + +R + V+ G +AC+ E
Sbjct: 311 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACA------ET 364
Query: 509 LGYFEMMQKE-YKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
GYF+ Q IK D +C ++D++ + + EA+ + M + + V W+
Sbjct: 365 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAI 423
Query: 564 IAGCRRHGNMELGFYAAEQLLK--LKPKD 590
IA ++G+ + ++L+ +KP D
Sbjct: 424 IAALEQNGHYDDTILHFNEMLRFGMKPDD 452
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA------ 359
G+ V N ++ +Y +C A+++FD M + V+WN M+ ++ D++
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 360 ----KDDLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
D+ + N E++ +F ++ G+ PD TF+ +L CS L L
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G Q+HAL +KTG DV G+ALV+MY KC ++ A F M R +SW + I G
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
+ + L+LF +M G+ +Q ++ A +C+
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 43/187 (22%)
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT-------------- 462
+GF+ V L+ MY +C A RVF M R +SW +M+T
Sbjct: 46 SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105
Query: 463 -----------------GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS----- 500
G+ + +++ LF +M GV P++ TF L +CS
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+ G+ AL ++ + + L+DM+ + +++A F M E N V W
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSA------LVDMYGKCRSLDDALCFFYGMP-ERNWVSW 218
Query: 561 SVFIAGC 567
IAGC
Sbjct: 219 GAAIAGC 225
>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/570 (35%), Positives = 327/570 (57%), Gaps = 17/570 (2%)
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
SI G Q+H Y+VK V N+L + YS + +AF +K+ +W+++I
Sbjct: 30 SIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSATTWSSIIS 89
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+N L F KM++ ++P++ L S + CG + +G VH L +K GY +
Sbjct: 90 CFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDA 149
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V +S++ +Y KCG + A+K+FD M N+VTW+ M+ G+AQM +
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGE-----------N 198
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EAL +F + + + Y+FS+++++C+ LE G QI L +K+ F S VG++L
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSL 258
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V++Y KCG +E A +VF E+ R L W +M+ A HS + + ++LF+ M L+G++PN
Sbjct: 259 VSLYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TF+ L ACS+AG+V E YF++M KE +I+P HY L+DM R G +EEA + +
Sbjct: 319 ITFLNVLNACSHAGLVDEGKYYFDLM-KESRIEPTDKHYASLVDMLGRAGKLEEALEIVT 377
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M +P E +W + C H N EL +AA+++ +L P + L + + + GR+ED
Sbjct: 378 NMPIDPTESVWGALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
A + L R+ + SW+ ++KV++F + H +S EI++ L EL E+ + GY
Sbjct: 438 AAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGY 497
Query: 670 KQQESFELT----DEESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
S+ L DE++ ++ YHSE+LAIAFGL+ P PI V+K+ +C DCHN IK
Sbjct: 498 VADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKF 557
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++ T R IIVRD+ R H+F +G C+C D+
Sbjct: 558 MSICTRRVIIVRDNNRFHRFEDGKCSCNDY 587
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 216/445 (48%), Gaps = 24/445 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL +S+ +H +IVK+G V L+N Y K ++++ F++ P+ +
Sbjct: 21 LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+W+S+IS + QN P +++ M+ P + L +A +C L +GK +H
Sbjct: 81 ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+K + D VG+SL +Y+ CG + A K F+ + +NV++W+ ++ + GE +
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEE 200
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F + L E + N+++ +++ SVC L +G Q+ L IK + S+ V +S++
Sbjct: 201 ALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVS 260
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
LY KCG ++ A ++FD + NL WNAM+ AQ H+ + + +F ++
Sbjct: 261 LYSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQ-----------HSHTQKVIELFKRM 309
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
SGMKP+ TF ++L CS +++G+ L ++ +LV+M + G++
Sbjct: 310 KLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKL 369
Query: 440 ERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
E A + M S W +++T H ++ LA ++V +G +++
Sbjct: 370 EEALEIVTNMPIDPTESVWGALLTSCTIH----------KNTELAAFAADKVFELGPVSS 419
Query: 499 CSNAGM--VYEALGYFEMMQKEYKI 521
+ + Y A G FE K K+
Sbjct: 420 GMHISLSNAYAADGRFEDAAKARKL 444
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F+EAL E V S+ +++ C N L I +K+ FV + LV++
Sbjct: 205 FKEAL---FENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSL 261
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG++E A +VFD +P N+ W +++ Q+S + I +F M +G P +T
Sbjct: 262 YSKCGDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L ACS + GK + + + E SL + G L A++ +
Sbjct: 322 LNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPI 381
Query: 239 KNVMS-WTTVIGAC 251
S W ++ +C
Sbjct: 382 DPTESVWGALLTSC 395
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/692 (31%), Positives = 357/692 (51%), Gaps = 34/692 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD-NLPRINVVSWTSLISGYVQNS 154
+H+ I+ G H L+ Y + + VF P NV W S+I N
Sbjct: 35 LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
A+ ++ + P T + + AC+ L + K IH V+ D +GN
Sbjct: 95 LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGN 154
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG---EAV----QGLRFFSKM 267
+L +Y L+ A K F + ++V+SW ++I NG EA+ Q ++ F +M
Sbjct: 155 ALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEM 214
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+++ +P+ T+TSI CG + L G VH I GY + N ++ +Y KCG +
Sbjct: 215 VNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 273
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQ---MMDLAK--DDLSAHNGGTE----------- 371
+Q++F GM + V+WN+MI + Q M D K +++ A + T
Sbjct: 274 LASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSE 333
Query: 372 ----ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
L + S++ + G+ PD+ T SIL +CS L A QG++IH K G SDV VG
Sbjct: 334 DCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGN 393
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
L+ MY KCG + + +VF M T+ +++WT++I+ + +A++ F +M AG+ P
Sbjct: 394 VLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVP 453
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ V FV + ACS++G+V E L YF M+K+YKI+P ++HY C++D+ R +++A DF
Sbjct: 454 DHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDF 513
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I M +P+ IW ++ CR G+ E+ +E++++L P D Y ++ +I+ + G+W
Sbjct: 514 ILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKW 573
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ V ++ + L + SW+ I++KVY F Q E+ K+L L
Sbjct: 574 DQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKE 633
Query: 668 GYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY F L D +E + HSE+LAIAFGLLNT +P+ V+K+ +C DCH
Sbjct: 634 GYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTKPGTPLQVMKNLRVCEDCHTVT 693
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ + RE++VRD+ R H F +G C+C D+
Sbjct: 694 KYISKIVQRELLVRDANRFHVFKDGACSCGDY 725
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 195/391 (49%), Gaps = 54/391 (13%)
Query: 59 FQEALSVLTEGPKVQ----TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EALS+ +E +++ T ++ S++ C A+ IH ++ G D ++
Sbjct: 96 FSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNA 155
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELA-------IHVFLDML 167
L+++Y + ++++A+KVF+ +P +VVSW SLISGY N A I +F++M+
Sbjct: 156 LIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMV 215
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL- 226
P +T+ + L AC L + GK +H Y++ E DT+ N L ++Y+ CG+L
Sbjct: 216 NQFK-PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLL 274
Query: 227 ------------------------------NSAIKAFNRIREKNVMSWTTVIGACGENGE 256
++K F ++ +++++W T+I +C + +
Sbjct: 275 ASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSED 334
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
GLR S+M +EG+ P+ T+ SI VC + + R G ++H KLG S++ V N
Sbjct: 335 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNV 394
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG + + ++F M ++VTW A+I+ + G +A+ F
Sbjct: 395 LIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISA-----------CGMYGEGKKAVRAF 443
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
++ ++G+ PD F +I+ CS +E+G
Sbjct: 444 GEMEAAGIVPDHVAFVAIIFACSHSGLVEEG 474
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+LG + + TEG ++ +S+L C + + IH I K G D V L
Sbjct: 336 NLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVL 395
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG++ + +VF + +VV+WT+LIS + + A+ F +M AG P +
Sbjct: 396 IEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDH 455
Query: 176 VTLGTALTACS 186
V + ACS
Sbjct: 456 VAFVAIIFACS 466
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 15/188 (7%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEM 449
FSSI + Q ++H+L + G V+ L+ Y + VF +
Sbjct: 16 FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLAS 75
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ + W S+I ++ L +AL L+ + ++P+ TF + AC AG++
Sbjct: 76 PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINAC--AGLL---- 129
Query: 510 GYFEMMQKEYKIKPVM----DHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
FEM + + M D Y+ LIDM+ R +++A ++M + V W+
Sbjct: 130 -DFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR-DVVSWNSL 187
Query: 564 IAGCRRHG 571
I+G +G
Sbjct: 188 ISGYNANG 195
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 332/606 (54%), Gaps = 14/606 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF+ + ++G +Y +LQ C+ S+ ++HA IV G FV T L+N
Sbjct: 155 GFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLN 214
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K +E++ KVF+ + +NVVSW ++I+G+ N A +FL M+ G P T
Sbjct: 215 MYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQT 274
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR-- 235
A L + K++ Y ++ + +T VG +L + S CGSL A FN
Sbjct: 275 FIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHF 334
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I + W +I +G + L F+KM I + +T S+ + + L +G
Sbjct: 335 ITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLG 394
Query: 296 AQVHSLGIKLGYASN-LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
+VH+ IK G N + + N++ Y KCG +++ +K+F+ M +L++W +++ ++Q
Sbjct: 395 KKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ K A+ IFS + + G+ P+ +TFSS+L C+ L LE G+Q+H +
Sbjct: 455 CSEWDK-----------AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGII 503
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K G D + +ALV+MY KCG + A +VF +S +SWT++I G A H + AL
Sbjct: 504 CKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDAL 563
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
QLF M+ GV PN VTF+ L ACS+ G+V E L YF++M+K Y + P M+HY C++D+
Sbjct: 564 QLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDL 623
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R+G + +A +FI +M EPNE++W + CR HGN+ELG AA+++L K ++ +Y
Sbjct: 624 LSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATY 683
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L + ++ +G ++D +++L +E+ + + SWI + ++ F D HP+ +I+
Sbjct: 684 VLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIY 743
Query: 655 KVLDEL 660
L+EL
Sbjct: 744 AKLEEL 749
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 268/548 (48%), Gaps = 36/548 (6%)
Query: 39 RSGSKLIQLNGNSEPVRSLGFQEALSVLTE--GPKVQTSSYVSLLQECVNRKSLSNAEII 96
R+ + I + +P + G + SV + +Q V LL++CV+ + L A+ +
Sbjct: 31 RNSALTITHSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTV 90
Query: 97 HAHIVKT--GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
H ++K+ +H ++ + + Y KC +++ A ++FD + + N SWT LI+G +N
Sbjct: 91 HGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENG 150
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
F +M G +P L C L+SI LG +HA +V T V
Sbjct: 151 LFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVST 210
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L ++Y+ + + K FN + E NV+SW +I N + F +M+ EG+ P
Sbjct: 211 ALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTP 270
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ T ++ G + + +V ++LG SN V +++ + KCG + EA+ +F
Sbjct: 271 DAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF 330
Query: 335 DGMSHVNL----VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+ SH WNAMI+G+ + S N +AL +F+K+ + + D YT
Sbjct: 331 N--SHFITCRFNAPWNAMISGYLR---------SGFN--EKALELFAKMCQNDIYLDHYT 377
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ S+ + L L G+++HA +K+G ++ V + A+ N Y KCG +E +VF M
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R LISWTS++T ++ S +A+++F +M G+ PNQ TF L +C+N L
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN-------L 490
Query: 510 GYFEMMQKEYKI--KPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E Q+ + I K +D C L+DM+ + GC+ +A ++ + V W+
Sbjct: 491 CLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAI 549
Query: 564 IAGCRRHG 571
IAG +HG
Sbjct: 550 IAGHAQHG 557
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 347/646 (53%), Gaps = 14/646 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N + VR G + + + G V SY S + C L+ +HAH +K D
Sbjct: 270 NEQYVR--GLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 327
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V T +V+VY K ++ +A++ F LP V + +++ G V+ A+ +F M+ +
Sbjct: 328 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 387
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
V+L +AC+ + G+Q+H +K + D V N++ LY C +L A
Sbjct: 388 SIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEA 447
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F +++K+ +SW +I A +NG + F++ML G++P++FT S+ C +
Sbjct: 448 YLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAAL 507
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
SL G VH IK G S+ V ++++ +Y KCG++DEAQKL D + +V+WNA++
Sbjct: 508 RSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAIL 567
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G S + EA FS++ G+KPD +TF+++L C+ L +E G+Q
Sbjct: 568 SG-----------FSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQ 616
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH +K L D + + LV+MY KCG + + VF ++ R +SW +MI G+A H L
Sbjct: 617 IHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGL 676
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL++FE M V PN TFV L ACS+ G+ + YF +M YK++P ++H+
Sbjct: 677 GVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFA 736
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R +EA FI M F+ + VIW ++ C+ ++E+ AA +L L P
Sbjct: 737 CMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPD 796
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D Y +L +++ +G+W DV+ + L ++ +L + SWI ++ +++ F D HP+
Sbjct: 797 DSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPR 856
Query: 650 SAEIFKVLDELVEKAKCFGYKQQE-SFELTDEESASVYHSEKLAIA 694
S E++++L++L+ + K GY+ SF DEE ++ H +L +A
Sbjct: 857 SGELYEMLNDLIGEMKLSGYEPDSASFVEVDEEGSAPEHCLELLVA 902
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 272/522 (52%), Gaps = 27/522 (5%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQE++ + E G +++ LL+ C + LS +HA VKTG D +
Sbjct: 172 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 231
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++YGKC ++++A F +P N VSW + I+G VQN Q + +F++M G +
Sbjct: 232 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVS 291
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ +A +C+++ + G+Q+HA+ +K + D VG ++ +Y+ SL A +AF
Sbjct: 292 QPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFF 351
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ V + ++ G ++ + F M+ I+ + +L+ + S C
Sbjct: 352 GLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 411
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G QVH L IK G+ ++ V N+++ LY KC + EA +F GM + V+WNA+IA Q
Sbjct: 412 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 471
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ DD H F+++ GMKPD +T+ S+L C+ L +LE G +H
Sbjct: 472 --NGHYDDTILH---------FNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKV 520
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+G SD V + +V+MY KCG I+ A ++ + + ++SW ++++GF+ + S +A
Sbjct: 521 IKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQ 580
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLI 532
+ F +ML G++P+ TF L C+N + LG ++ + K + + D Y+ L+
Sbjct: 581 KFFSEMLDMGLKPDHFTFATVLDTCANLATI--ELGK-QIHGQIIKQEMLDDEYISSTLV 637
Query: 533 DMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
DM+ + G + ++ F+ ++K DF V W+ I G HG
Sbjct: 638 DMYAKCGDMPDSLLVFEKVEKRDF----VSWNAMICGYALHG 675
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/555 (26%), Positives = 262/555 (47%), Gaps = 60/555 (10%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ Y G++ A +FD +P +VVSW +L+SGY Q + ++ +F++M G P
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L +CS+LE + LG Q+HA VK E D G++L +Y C SL+ A+ F
Sbjct: 191 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 250
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E+N +SW I C +N + V+GL F +M G+ ++ + S C M L
Sbjct: 251 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ IK ++S+ V +I+ +Y K + +A++ F G+ + + T NAM+ G
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG--- 367
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
L + L G EA+ +F + S ++ D+ + S + + C+ QG+Q+H L
Sbjct: 368 ---LVRAGL-----GIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLA 419
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+K+GF D+ V A++++Y KC + A +F M + +SW ++I + +
Sbjct: 420 IKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTI 479
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM--DHYMC-- 530
F +ML G++P+ T+ L AC+ +L Y +M + IK + D ++
Sbjct: 480 LHFNEMLRFGMKPDDFTYGSVLKACA----ALRSLEY-GLMVHDKVIKSGLGSDAFVAST 534
Query: 531 LIDMFVRLGCIEEA----------------------------------FDFIKKMDFEPN 556
++DM+ + G I+EA F + M +P+
Sbjct: 535 VVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 594
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY-AMLLDIFVSAGRWEDVAVVKN 615
++ + C +ELG Q++K + D E + L+D++ G D +V
Sbjct: 595 HFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVF- 653
Query: 616 LTREEKLSETDDWSW 630
EK+ + D SW
Sbjct: 654 ----EKVEKRDFVSW 664
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 190/389 (48%), Gaps = 25/389 (6%)
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
DT N++ + YS G +++A+ F+ + + +V+SW ++ + G + + F +M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
G+ P+ T + C + L +G QVH+L +K G ++R ++++ +Y KC +D
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+A F GM N V+W A IAG Q + L +F ++ G+
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVR-----------GLELFIEMQRLGLGVSQ 292
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+++S C+ + L G Q+HA +K F SD VVGTA+V++Y K + A R F
Sbjct: 293 PSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFG 352
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+ T+ + +M+ G L +A+ LF+ M+ + +R + V+ G +AC+ E
Sbjct: 353 LPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACA------ET 406
Query: 509 LGYFEMMQKE-YKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
GYF+ Q IK D +C ++D++ + + EA+ + M + + V W+
Sbjct: 407 KGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK-QKDSVSWNAI 465
Query: 564 IAGCRRHGNMELGFYAAEQLLK--LKPKD 590
IA ++G+ + ++L+ +KP D
Sbjct: 466 IAALEQNGHYDDTILHFNEMLRFGMKPDD 494
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA------ 359
G+ V N ++ +Y +C A+++FD M + V+WN M+ ++ D++
Sbjct: 89 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148
Query: 360 ----KDDLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
D+ + N E++ +F ++ G+ PD TF+ +L CS L L
Sbjct: 149 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 208
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G Q+HAL +KTG DV G+ALV+MY KC ++ A F M R +SW + I G
Sbjct: 209 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 268
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
+ + L+LF +M G+ +Q ++ A +C+
Sbjct: 269 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 43/187 (22%)
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT-------------- 462
+GF+ V L+ MY +C A RVF M R +SW +M+T
Sbjct: 88 SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 147
Query: 463 -----------------GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS----- 500
G+ + +++ LF +M GV P++ TF L +CS
Sbjct: 148 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 207
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+ G+ AL ++ + + L+DM+ + +++A F M E N V W
Sbjct: 208 SLGVQVHALAVKTGLEIDVRTGSA------LVDMYGKCRSLDDALCFFYGMP-ERNWVSW 260
Query: 561 SVFIAGC 567
IAGC
Sbjct: 261 GAAIAGC 267
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/665 (32%), Positives = 356/665 (53%), Gaps = 19/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
++ ++ +G H+ F+M +N G++ A K F + +++ W ++I GY Q +
Sbjct: 6 VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNI 65
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ I +++DM + +P T L AC +GKQIH KY + V NS
Sbjct: 66 VDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNS 125
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+Y+ G ++ A F+++ ++ V+SWT++I +NG+ ++ L F +M ++P+
Sbjct: 126 LVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPD 185
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
L S+ + + L G +H L KLG + S+ +Y K GLV+ A+ F+
Sbjct: 186 WIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 245
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSI 394
M NL+ WNAMI+G+A NG G EA+ +F ++ + ++ D T S
Sbjct: 246 RMEKPNLILWNAMISGYAN------------NGYGEEAIKLFREMITKNIRVDSITMRSA 293
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
+ +++ +LE + K+ + D V T L++MY KCG I A VF ++ + +
Sbjct: 294 VLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDV 353
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+ W+ MI G+ H +A+ L+ +M AGV PN TF+G L AC N+G+V E F +
Sbjct: 354 VLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHL 413
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M ++ I+P HY C++D+ R G + +A+DFI M +P +W ++ C+ H +
Sbjct: 414 M-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVR 472
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG AAEQL L P + Y L +++ SA W VA V+ + ++ L++ S I I
Sbjct: 473 LGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN 532
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-KQQESF--ELTDEESASV--YHSE 689
+ +F+ D HP+S EIF+ LD L ++ K GY ES +L EE +HSE
Sbjct: 533 GNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEETLCHHSE 592
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LA+A+G+++T + + + K+ C +CH+ IK+I+ L REII+RD+KR H F +G C
Sbjct: 593 RLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFHHFKDGVC 652
Query: 750 TCRDF 754
+C DF
Sbjct: 653 SCGDF 657
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 193/393 (49%), Gaps = 12/393 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+++ +L+ C + IH K G + FV LV++Y K G + A+ VFD L
Sbjct: 87 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
VVSWTS+ISGYVQN P A++VF +M + P + L + +TA +++E + GK
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH V K E + + SL ++Y+ G + A FNR+ + N++ W +I NG
Sbjct: 207 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 266
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ ++ F +M+++ I+ + T+ S + SL + + K Y + V
Sbjct: 267 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 326
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y KCG + A+ +FD ++ ++V W+ MI G+ H G EA+ +
Sbjct: 327 GLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYG-----------LHGHGQEAICL 375
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
++++ +G+ P+ TF +LT C +++G ++ L G + +V++ +
Sbjct: 376 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGR 435
Query: 436 CGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
G + +A + M + +S W ++++ H
Sbjct: 436 AGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 468
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG E L F+E ++T+ +V + + S + SL A + +I K+
Sbjct: 265 NGYGEEAIKL-FRE---MITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRD 320
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV T L+++Y KCG++ A+ VFD + +VV W+ +I GY + + AI ++ +M
Sbjct: 321 DTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMK 380
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+AG P + T LTAC + ++ G ++ + + E + + L G LN
Sbjct: 381 QAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLN 440
Query: 228 SAIKAFNRIREK-NVMSWTTVIGAC 251
A + K V W ++ AC
Sbjct: 441 QAYDFIMSMPIKPGVSVWGALLSAC 465
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
+Q++ + +G + +N G + A + F E+S ++ W ++I G+
Sbjct: 4 DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 63
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
++ ++++ DM ++ V PN TF+ L AC G E +G ++ + +K +
Sbjct: 64 NIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC--GGTSVEGIGK-QIHGQTFKYGFGSNV 120
Query: 528 YM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN-ME-LGFYAAEQL 583
++ L+ M+ + G I A K+ + V W+ I+G ++G+ ME L + +
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLH-DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQ 179
Query: 584 LKLKP 588
+KP
Sbjct: 180 CNVKP 184
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/621 (33%), Positives = 344/621 (55%), Gaps = 24/621 (3%)
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGKQIHAYVVKY 204
++ + N A+ F M ++G P VT L A + + + I G++IH Y
Sbjct: 1 MAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARIS 60
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+ VG ++ S+Y CG L+ A AF ++ KN ++W ++ +G + L F
Sbjct: 61 GLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELF 120
Query: 265 SKML--SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA--SNLRVRNSIMYL 320
+M S +P++F+ + C + L G ++H + + G ++ V +++ +
Sbjct: 121 REMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNM 180
Query: 321 YLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
Y KCG ++EA+K+FD + H + V WNAMIA +AQ H G +AL ++ +
Sbjct: 181 YSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQ-----------HGRGKQALDLYRSM 229
Query: 380 -NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+++ + P TF +++ +C+ L AL+QG IHA T F ++++V ALV+MY KCG
Sbjct: 230 HDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGC 289
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A VF M + ISW ++I+ +A H S QAL L+++M L GV+P +VTFVG L+A
Sbjct: 290 LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSA 349
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G+V + L YF MQ +++IKP + H+ C+ID+ R G + EA +K M + N V
Sbjct: 350 CSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAV 409
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
W + C+ HG+++ G AA+Q++ P Y +L +I+ +AGRW+DV ++ +
Sbjct: 410 QWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMA 469
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---- 674
+ ++ SWI I D V+ F D HPQ EI+ L ++VE+ K GY S
Sbjct: 470 ARGVKKSPGKSWIEIGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFH 529
Query: 675 -FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
E ++E V HSEKLAI +G + P S + +VK+ +C DCH K ++ +T R+I
Sbjct: 530 DLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKI 589
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
+VRD+ R H F NG C+CRD+
Sbjct: 590 VVRDAARFHLFENGSCSCRDY 610
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 211/435 (48%), Gaps = 29/435 (6%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH + +G + V T ++++YGKCG +++A+ F+ L N V+W ++++ Y + +
Sbjct: 53 IHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGR 112
Query: 156 PELAIHVFLDMLEAGN--YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE--DDTS 211
A+ +F +M E P + A+ ACS+LE + G++IH + + E D
Sbjct: 113 DREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVV 172
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKML-S 269
VG +L ++YS CG L A K F+ IR + + + W +I A ++G Q L + M +
Sbjct: 173 VGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDT 232
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+ P + T ++ VC + +L+ G +H+ + +NL V N+++++Y KCG +DE
Sbjct: 233 TDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDE 292
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A +F M + ++WN +I+ +A H +AL ++ +++ G+KP
Sbjct: 293 ALDVFHSMKLKDEISWNTIISSYAY-----------HGHSDQALLLYQEMDLQGVKPTEV 341
Query: 390 TFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TF +L+ CS + G + + + V ++++ + GR+ A V
Sbjct: 342 TFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKS 401
Query: 449 MSTRT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV-GALAACSNAGMVY 506
M + + W S++ H + ++ + ++ ++V + G SN +Y
Sbjct: 402 MPIQANAVQWMSLLGACKTHGDLKRGVRAADQVV------DRVPWTSGGYVLLSN---IY 452
Query: 507 EALGYFEMMQKEYKI 521
A G ++ ++K KI
Sbjct: 453 AAAGRWKDVEKIRKI 467
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ ++V+++ C +L IHA + T + V LV++YGKCG ++EA VF
Sbjct: 238 KQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVF 297
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
++ + +SW ++IS Y + + A+ ++ +M G PT VT L+ACS +
Sbjct: 298 HSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVA 357
Query: 193 LGKQIHAYVVKYQTEDDTSVGNS------LCSLYSTCGSLNSAIKAFNRIR-EKNVMSWT 245
G Y+ +DD + S + L G L A + + N + W
Sbjct: 358 DGLDYF-----YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 412
Query: 246 TVIGACGENGEAVQGLR 262
+++GAC +G+ +G+R
Sbjct: 413 SLLGACKTHGDLKRGVR 429
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/580 (36%), Positives = 329/580 (56%), Gaps = 23/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ AC L GK+IH V+K E D V SL +YS G + A K F+ + ++
Sbjct: 4 VKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDR 60
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW +I +NG A + L +M EG++ + T+ S+ VC + + G +H
Sbjct: 61 GSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLY 120
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK G L V N+++ +Y K G + AQK+F G+ ++V+WN +I G+AQ
Sbjct: 121 VIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQ------- 172
Query: 362 DLSAHNG-GTEALSIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
NG +EA+ ++ + + P+ T+ SIL S + AL+QG +IH +K
Sbjct: 173 -----NGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCL 227
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
SDV VGT L++MY KCG+++ A +F ++ + + W +MI+ + H +AL+LF +
Sbjct: 228 YSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFRE 287
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M V+P+ +TFV L+ACS++G+V +A F MM++EY IKP + HY C++D+F R G
Sbjct: 288 MKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAG 347
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+E AF+FIKKM +P+ W + CR HGN+ELG +A+E+L ++ ++ Y +L +
Sbjct: 348 ELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSN 407
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ + G+WE V V++L R+ L + WS I + +KV F + HP+ EI++ L +
Sbjct: 408 IYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRD 467
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L K K GY F L D +E + HSE+LAIA+G+++T +PI + K+ +
Sbjct: 468 LTSKIKTIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRV 527
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH K I+ +T REIIVRDS R H F G C+C D+
Sbjct: 528 CGDCHTVTKFISIITEREIIVRDSSRFHHFKGGTCSCGDY 567
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/397 (29%), Positives = 198/397 (49%), Gaps = 19/397 (4%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L + + IH ++K G D FV LV++Y + G + +A+K+FD++P + SW ++IS
Sbjct: 9 DLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMIS 68
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
GY QN A+ + +M G +T+ + L C+ + I GK IH YV+K+ E
Sbjct: 69 GYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF 128
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+ V N+L ++Y+ GSL A K F + K+V+SW T+I +NG A + + + M
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 269 S-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
E I PN+ T SI + +L+ G ++H IK S++ V ++ +Y KCG +
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
D+A LF + N V WNAMI+ + H G +AL +F ++ + +KPD
Sbjct: 248 DDAISLFYQVPRKNSVPWNAMISCYG-----------VHGDGEKALELFREMKAERVKPD 296
Query: 388 LYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
TF S+L+ CS + + + + + G + +V+++ + G +E A
Sbjct: 297 HITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFI 356
Query: 447 VEMSTRTLIS-WTSMITGFANHS----LSHQALQLFE 478
+M + S W +++ H H + +LFE
Sbjct: 357 KKMPIQPDASAWGALLNACRIHGNIELGKHASERLFE 393
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 124/240 (51%), Gaps = 6/240 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NGN+ + + L EG K+ + S+L C + + ++IH +++K G
Sbjct: 73 NGNAAEALDIADEMRL----EGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEF 128
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ FV L+N+Y K G++ AQKVF L + +VVSW +LI+GY QN AI V+L M
Sbjct: 129 ELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASEAIEVYLLME 187
Query: 168 EAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
E P T + L A S + +++ G +IH V+K D VG L +Y CG L
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKL 247
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ AI F ++ KN + W +I G +G+ + L F +M +E ++P+ T S+ S C
Sbjct: 248 DDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSAC 307
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++VS+L + +L IH ++K + D FV T L+++YGKCG +++A +F
Sbjct: 197 GTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQ 256
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+PR N V W ++IS Y + E A+ +F +M P ++T + L+ACS +
Sbjct: 257 VPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDA 316
Query: 195 KQ-IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR----EKNVMSWTTVIG 249
+ + +Y + + L+ G L AFN I+ + + +W ++
Sbjct: 317 QWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELE---MAFNFIKKMPIQPDASAWGALLN 373
Query: 250 ACGENG 255
AC +G
Sbjct: 374 ACRIHG 379
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/653 (33%), Positives = 360/653 (55%), Gaps = 48/653 (7%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+++ Y K G + +A+KVFD +P NVVSWTS++ GYVQ E A +F +M
Sbjct: 89 MISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSW 148
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V +G L ++ +L I E D V ++ Y G L+ A + F+
Sbjct: 149 TVMIGGLLKESRIDDAKKLFDMI--------PEKDVVVVTNMIGGYCQVGRLDEARELFD 200
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ +NV +WTT++ +NG + F M + NE + T++ + G S R+
Sbjct: 201 EMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVM----PERNEVSWTAM--LMGYTQSGRM 254
Query: 295 GAQVH---SLGIKLGYASNLRVRNSIMYLYLKCGLVDE---AQKLFDGMSHVNLVTWNAM 348
++ +K A N + L+ GL E A+ +F+GM + TWNAM
Sbjct: 255 KEAFELFEAMPVKWIVACN--------EMILQFGLAGEMHRARMMFEGMKERDEGTWNAM 306
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I ++ + DL EAL +F+++ G+ + + S+L++C+ L +L+ G
Sbjct: 307 I----KVFERKGLDL-------EALGLFARMQREGVALNFPSMISVLSVCASLASLDHGR 355
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
Q+HA +++ F D+ V + L+ MY KCG + RA +F + ++ W SMITG++ H
Sbjct: 356 QVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHG 415
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
L +AL +F DM +GV+P++VTF+G L+ACS +G V E FE M+ Y+++P ++HY
Sbjct: 416 LGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHY 475
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G ++EA + ++KM EP+ ++W + CR H ++L A E+L KL+P
Sbjct: 476 ACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEP 535
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVV-KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL- 646
K+ Y +L ++ + GRW DV V+ K + R ++ + SWI ++ KV+ F D
Sbjct: 536 KNAGPYVLLSHMYATKGRWRDVEVLRKKINR--RVIKFPGCSWIEVEKKVHMFTGGDSKS 593
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EESASV-YHSEKLAIAFGLLNTP 701
HP+ I ++L++L + GY SF L D E++ S+ YHSE+LA+A+GLL P
Sbjct: 594 HPEQHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVP 653
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+ +C DCH+ IK+I +T REII+RD+ R H F +G C+C+DF
Sbjct: 654 EGMPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDF 706
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 198/410 (48%), Gaps = 25/410 (6%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+EA + E P+ S+ ++ + + +A+ + I +D V+T ++ Y
Sbjct: 131 EEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMI----PEKDVVVVTNMIGGY 186
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
+ G ++EA+++FD + NV +WT+++SGY +N + ++A +F M E L
Sbjct: 187 CQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLM 246
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ E+ L A VK+ N + + G ++ A F ++E+
Sbjct: 247 GYTQSGRMKEAFEL---FEAMPVKW-----IVACNEMILQFGLAGEMHRARMMFEGMKER 298
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +W +I G ++ L F++M EG+ N ++ S+ SVC ++ SL G QVH
Sbjct: 299 DEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVH 358
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ ++ + +L V + ++ +Y+KCG + A+ +F+ ++V WN+MI G++Q
Sbjct: 359 ARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQ----- 413
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTG 418
H G EAL++F + SSG++PD TF +L+ CS +++G +I A+
Sbjct: 414 ------HGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQ 467
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ +V++ + GR++ A + +M I W +++ NH
Sbjct: 468 VEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNH 517
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 201/465 (43%), Gaps = 78/465 (16%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDN--LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
T ++ YG+ G++ A+KVFDN LP+ + SW +++S Y ++ +P A+ +F M
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM---- 78
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
+ +T N + S Y G + A
Sbjct: 79 -----------------------------------PQRNTVSFNGMISGYVKNGMVADAR 103
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
K F+ + E+NV+SWT+++ + G + + F +M P ++ + G +
Sbjct: 104 KVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM------PRRNVVSWTVMIGGLLK 157
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
R+ + ++ V +++ Y + G +DEA++LFD M N+ TW M++
Sbjct: 158 ESRIDDAKKLF--DMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVS 215
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQ 409
G+A+ NG + + KL + + +++++L ++ +++ E
Sbjct: 216 GYAK------------NG---RVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFEL 260
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
A+ +K +V ++ + G + RA +F M R +W +MI F L
Sbjct: 261 FEAMPVKW-----IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGL 315
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHY 528
+AL LF M GV N + + L+ C++ A + + + +++ E+ D Y
Sbjct: 316 DLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFD----QDLY 371
Query: 529 MC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ LI M+V+ G + A + F+ + V+W+ I G +HG
Sbjct: 372 VASVLITMYVKCGDLVRAKGIFNRFLFK-DVVMWNSMITGYSQHG 415
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 34/282 (12%)
Query: 427 TALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
T+ ++ Y + G I A +VF + RT+ SW +M++ + AL LF+ M
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM---- 78
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ N V+F G ++ GMV +A F++M + + + ++ +V+ G +EEA
Sbjct: 79 PQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVS-----WTSMVRGYVQEGMVEEA 133
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLDIFVS 603
+M N V W+V I G + ++ A++L + P KD ++ +
Sbjct: 134 EKLFWEMP-RRNVVSWTVMIGGLLKESRID----DAKKLFDMIPEKDVVVVTNMIGGYCQ 188
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE- 662
GR ++ + L E K+ W+ + S +G + ++F+V+ E E
Sbjct: 189 VGRLDE---ARELFDEMKVRNVFTWT------TMVSGYAKNGRVDVARKLFEVMPERNEV 239
Query: 663 --KAKCFGYKQ----QESFELTDEESAS-VYHSEKLAIAFGL 697
A GY Q +E+FEL + + ++ + FGL
Sbjct: 240 SWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGL 281
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/658 (33%), Positives = 350/658 (53%), Gaps = 45/658 (6%)
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
N+ A+ +FD +P +VVSW +++SGY QN + A +F +M + N L +
Sbjct: 45 NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQ 104
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSV--GNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
++ RL ++++ D + N + Y L A F+R+ E++
Sbjct: 105 NGRIEDARRL----------FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDE 154
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+I +NGE ++ R F E + FT T++ S L +V
Sbjct: 155 VSWNTMISGYAQNGELLEAQRLFE----ESPVRDVFTWTAMVSGYVQNGMLDEARRVFD- 209
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA-- 359
G+ N N+I+ Y++C +D+A++LF+ M N+ +WN MI G+AQ D+A
Sbjct: 210 GMP---EKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQA 266
Query: 360 ---------KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
+D +S A +G G EAL +F ++ G + + TF+S L+ C+ +
Sbjct: 267 RNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEI 326
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
ALE G+Q+H +K G S VG AL+ MY KCG I+ A VF + + ++SW +MI
Sbjct: 327 AALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMI 386
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
G+A H +AL LFE M G+ P+ VT VG L+ACS+ G+V + YF M ++Y I
Sbjct: 387 AGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGI 446
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
HY C+ID+ R G +++A + +K M FEP+ W + R HGN ELG AA+
Sbjct: 447 TANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAK 506
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
+ +++P + Y +L +++ ++GRW DV ++ R+ + + +SW+ +++K+++F
Sbjct: 507 MIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFT 566
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFG 696
D +HP+ I+ L+EL K K GY L D EE V YHSEKLA+AFG
Sbjct: 567 VGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAFG 626
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+L P PI V+K+ +C DCHN +K I+ + R II+RDS R H F G C+C D+
Sbjct: 627 ILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDY 684
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 197/410 (48%), Gaps = 28/410 (6%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
S+ ++ V R L +A I + +D +++ Y + G + EAQ++F+
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRM----PERDEVSWNTMISGYAQNGELLEAQRLFEES 180
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P +V +WT+++SGYVQN + A VF M E + N + C ++ R
Sbjct: 181 PVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAII-AGYVQCKRMDQAR--- 236
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+ + + S N++ + Y+ G + A F+R+ +++ +SW +I ++G
Sbjct: 237 ----ELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSG 292
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ L F +M +G + N T TS S C + +L +G QVH +K G S V N
Sbjct: 293 YGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGN 352
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG +D+A +F+G+ +V+WN MIAG+A+ H G EAL +
Sbjct: 353 ALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR-----------HGFGKEALML 401
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYK 434
F + +G+ PD T +L+ CS +++G E +++T G ++ T ++++
Sbjct: 402 FESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLG 461
Query: 435 KCGRIERASRVFVEMSTRT-LISWTSMITG---FANHSLSHQALQLFEDM 480
+ GR++ A + M +W +++ N L +A ++ +M
Sbjct: 462 RAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 511
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 143/294 (48%), Gaps = 6/294 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
EA V P+ + S+ +++ V K + A + + Q+ ++
Sbjct: 201 LDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQAR----ELFEAMPCQNVSSWNTMITG 256
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y + G++ +A+ FD +P+ + +SW ++I+GY Q+ E A+H+F++M G T
Sbjct: 257 YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 316
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L+ C+ + ++ LGKQ+H VVK E VGN+L +Y CG+++ A F I E
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 376
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ- 297
K V+SW T+I +G + L F M GI P++ T+ + S C + G +
Sbjct: 377 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 436
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+S+ G +N + ++ L + G +D+AQ L M + TW A++
Sbjct: 437 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 490
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/590 (34%), Positives = 325/590 (55%), Gaps = 27/590 (4%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYV-----VKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
V+L + C + G+ IH +V + + V NSL S+Y+ G L+ A+
Sbjct: 65 VSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDAL 124
Query: 231 KAFNRIREKNVMSWTTVIGACGE-NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F+ + +NV++WTTV+ A +G + LRF M +G+ PN +T +S+ C T
Sbjct: 125 RMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTP 184
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
L VH+ +K G S++ VR+S++ Y+K G +D +++FD M +LV WN++I
Sbjct: 185 GML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVWNSII 241
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
AG AQ D G A+ +F ++ +G + T +S+L C+ +V LE G Q
Sbjct: 242 AGFAQSGD-----------GVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQ 290
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+HA LK + D+++ AL++MY KCG +E A +F M R +ISW++M++G A +
Sbjct: 291 VHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQNGK 348
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
S +AL++F+ M GV PN VT VG L ACS+AG+V + YF M++ + I+P +H+
Sbjct: 349 SVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPEREHHN 408
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R G ++EA +FI M EP+ VIW + CR H N L YAA ++LKL+P
Sbjct: 409 CMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREILKLEPD 468
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D + +L + + +W D R+ + + SWI ++ +V+ F D HP
Sbjct: 469 DQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVHVFIAGDLSHPC 528
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVS 704
S I + L+ L+ + K GY Q F L D +E YHSEK+AI FG ++
Sbjct: 529 SDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAIVFGTMHAVDGK 588
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI ++K+ +C DCH F K+++ R I++RD R H F +G C+C D+
Sbjct: 589 PIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGDY 638
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 25/388 (6%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS--HQD---FFVMTFLVNVYGKCGNM 125
+ S L++ CV + + +IH H+ G H FV L ++Y K G +
Sbjct: 61 RADPVSLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLL 120
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQ-NSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++A ++FD +P NVV+WT++++ + + + A+ + M G P T + L A
Sbjct: 121 DDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGA 180
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C++ + +HA VK + D V +SL Y G L+ + F+ + ++++ W
Sbjct: 181 CTTPGML---TAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVFDEMVTRDLVVW 237
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I ++G+ V + F +M G N+ TLTS+ C M+ L G QVH+ +K
Sbjct: 238 NSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK 297
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
Y +L + N+++ +Y KCG +++A LF M ++++W+ M++G AQ
Sbjct: 298 --YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVSGLAQ---------- 345
Query: 365 AHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSD 422
NG + EAL +F + S G+ P+ T +L CS +E G ++ G +
Sbjct: 346 --NGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRLFGIQPE 403
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMS 450
+V++ + G+++ A MS
Sbjct: 404 REHHNCMVDLLGRAGKLDEAVEFIHGMS 431
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 165/325 (50%), Gaps = 24/325 (7%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
QEAL L +G ++ S+L C L+ +HA VK G D FV + L
Sbjct: 153 QEALRFLVAMRRDGVAPNAYTFSSVLGACTTPGMLT---AVHASTVKAGLDSDVFVRSSL 209
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y K G+++ ++VFD + ++V W S+I+G+ Q+ AI +F+ M +AG
Sbjct: 210 IDAYVKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQ 269
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
TL + L AC+ + + G+Q+HA+V+KY + D + N+L +Y CGSL A F+R
Sbjct: 270 GTLTSVLRACTGMVMLEAGRQVHAHVLKY--DRDLILHNALLDMYCKCGSLEDADALFHR 327
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ +++V+SW+T++ +NG++V+ LR F M S+G+ PN T+ + C + G
Sbjct: 328 MPQRDVISWSTMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDG 387
Query: 296 AQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTW-------- 345
S+ G N ++ L + G +DEA + GMS + V W
Sbjct: 388 WHYFRSMKRLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACR 447
Query: 346 ---NAMIAGHA--QMMDLAKDDLSA 365
NA +A +A +++ L DD A
Sbjct: 448 MHKNASLAAYAAREILKLEPDDQGA 472
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 343/601 (57%), Gaps = 18/601 (2%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQD---FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
R SL NA + + ++ ++ + T L+ Y + G +EEA+ +FD +P +VV+W
Sbjct: 20 RSSLRNACVESSQNTESPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPERDVVAW 79
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
T++I+GY ++ A F +M + G P TL + L +C +++ + G +H VVK
Sbjct: 80 TAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 204 YQTEDDTSVGNSLCSLYSTCG-SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
E V N+L ++Y+TC ++ +A F I+ KN ++WTT+I G+ + GL+
Sbjct: 140 LGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLK 199
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
+ +ML E + +T ++ S+ G Q+H+ +K G+ SNL V NSI+ Y
Sbjct: 200 MYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYC 259
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
+CG + EA++ F M +L+TWN +I+ +L + D S EAL +F + S
Sbjct: 260 RCGYLSEAKRYFHEMEDKDLITWNTLIS------ELERSDSS------EALLMFQRFESQ 307
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G P+ YTF+S++ C+ + AL G+Q+H + GF +V + AL++MY KCG I +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDS 367
Query: 443 SRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
RVF E+ R L+SWTSM+ G+ +H +A++LF+ M+ +G+RP+++ F+ L+AC +
Sbjct: 368 ERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRH 427
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
AG+V + L YF +M+ EY I P D Y C++D+ R G I EA++ +++M F+P+E W
Sbjct: 428 AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWG 487
Query: 562 VFIAGCRRHGNMEL-GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ C+ H + L AA+++++LKP+ +Y ML I+ + G+W + A V+ + R
Sbjct: 488 AILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMM 547
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
+ SWI ++++V+SF +D + P ++ ++ VL L+E+ K GY + D+
Sbjct: 548 GNKKEAGMSWIEVENQVFSFAVSDKMCPNASSVYSVLGLLIEETKEAGYVPDLDSLVYDQ 607
Query: 681 E 681
E
Sbjct: 608 E 608
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 197/374 (52%), Gaps = 15/374 (4%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQKVFDNLPR 137
S+L+ C N K L+ ++H +VK G +V L+N+Y C ME A +F ++
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKV 175
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N V+WT+LI+G+ + ++ ML T + A+ A +S++S+ GKQI
Sbjct: 176 KNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQI 235
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA VVK + + V NS+ Y CG L+ A + F+ + +K++++W T+I E ++
Sbjct: 236 HASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISEL-ERSDS 294
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L F + S+G PN +T TS+ + C + +L G Q+H + G+ N+ + N++
Sbjct: 295 SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANAL 354
Query: 318 MYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+ +Y KCG + +++++F + NLV+W +M+ G+ +H G EA+ +F
Sbjct: 355 IDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYG-----------SHGYGAEAVELF 403
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKK 435
K+ SSG++PD F ++L+ C +E+G + + + + G D + +V++ +
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 436 CGRIERASRVFVEM 449
G+I A + M
Sbjct: 464 AGKIGEAYELVERM 477
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ SL+ C N +L+ + +H I + G +++ + L+++Y KCG++ ++++VF +
Sbjct: 315 TFTSLVAACANIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEI 374
Query: 136 -PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
R N+VSWTS++ GY + A+ +F M+ +G P + L+AC + G
Sbjct: 375 EERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKG 434
Query: 195 -KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIGAC 251
K + +Y D + N + L G + A + R+ K + +W ++GAC
Sbjct: 435 LKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/665 (31%), Positives = 360/665 (54%), Gaps = 19/665 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA ++ TG L+ Y + G++E A++VFD P+ V +W ++I Y +
Sbjct: 26 IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ ++ M G P + T L AC+ +R G++ V DD VG +
Sbjct: 86 MFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAA 145
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
+ +LY+ CG ++ A++ F+++ ++++ WTT+I +NG+A + + + +M + ++ +
Sbjct: 146 VLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGD 205
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ + C T+ ++G +H I+ ++ V+ S++ +Y K G ++ A +F
Sbjct: 206 GVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFR 265
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSI 394
M + N+++W+A+I+G AQ NG AL + + S G KPD + S+
Sbjct: 266 RMLYKNVISWSALISGFAQ------------NGFAGNALQLVVDMQSFGYKPDSVSLVSV 313
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L CS++ L+ G+ +H ++ D V TA+++MY KCG + A VF ++S R
Sbjct: 314 LLACSQVGFLKLGKSVHGYIVRRLHF-DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDS 372
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISW ++I + H +AL LF M V+P+ TF L+A S++G+V + +F +
Sbjct: 373 ISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSI 432
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M EYKI+P HY C++D+ R G +EEA + I+ M EP IW ++GC HG
Sbjct: 433 MVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFL 492
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
+G AA+++L+L P D Y+++ + F +A RW++VA V+ + ++ + + +S + +
Sbjct: 493 IGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVN 552
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSE 689
K+++F D H Q EI +VL +L + K GY + F L + +E HSE
Sbjct: 553 GKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSE 612
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LAIAFGLLNT + +L+ K+ +C DCH K I+ + REI+VRD KR H F +G C
Sbjct: 613 RLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVC 672
Query: 750 TCRDF 754
+C D+
Sbjct: 673 SCGDY 677
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/413 (29%), Positives = 210/413 (50%), Gaps = 18/413 (4%)
Query: 61 EALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
EALS+ +EG + +S+Y +L+ C L + E V G D FV ++
Sbjct: 88 EALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVL 147
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
N+Y KCG M+EA +VFD + R ++V WT++I+G QN Q A+ ++ M + V
Sbjct: 148 NLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGV 207
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+ + AC++L ++G IH Y+++ D V SL +Y+ G L A F R+
Sbjct: 208 VMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRM 267
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
KNV+SW+ +I +NG A L+ M S G +P+ +L S+ C + L++G
Sbjct: 268 LYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGK 327
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
VH ++ + + +++ +Y KCG + A+ +FD +S + ++WNA+IA +
Sbjct: 328 SVHGYIVRRLHFDCVS-STAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG--- 383
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H G EALS+F ++ + +KPD TF+S+L+ S +E+G ++ +
Sbjct: 384 --------IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVN 435
Query: 417 TGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
+ A +V++ + GR+E A + M T I+ W ++++G NH
Sbjct: 436 EYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNH 488
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 143/276 (51%), Gaps = 13/276 (4%)
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
A++H+L I G + ++ Y + G ++ A+++FD + WNAMI +
Sbjct: 24 AKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAY--- 80
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
S EALS++ ++ S G++PD T++ +L C+R + L GE+ +
Sbjct: 81 --------SRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV 132
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
G+ DV VG A++N+Y KCG+++ A RVF +M R L+ WT+MITG A + + +A+
Sbjct: 133 DQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVD 192
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
++ M V + V +G + AC+ G L M ++ I V+ L+DM+
Sbjct: 193 IYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQ-TSLVDMY 251
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ G +E A ++M ++ N + WS I+G ++G
Sbjct: 252 AKNGHLELASCVFRRMLYK-NVISWSALISGFAQNG 286
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/606 (32%), Positives = 332/606 (54%), Gaps = 14/606 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF+ + ++G +Y +LQ C+ S+ ++HA IV G FV T L+N
Sbjct: 155 GFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLN 214
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K +E++ KVF+ + +NVVSW ++I+G+ N A +FL M+ G P T
Sbjct: 215 MYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQT 274
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR-- 235
A L + K++ Y ++ + +T VG +L + S CGSL A FN
Sbjct: 275 FIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHF 334
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I + W +I +G + L F+KM I + +T S+ + + L +G
Sbjct: 335 ITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLG 394
Query: 296 AQVHSLGIKLGYASN-LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
+VH+ IK G N + + N++ Y KCG +++ +K+F+ M +L++W +++ ++Q
Sbjct: 395 KKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ K A+ IFS + + G+ P+ +TFSS+L C+ L LE G+Q+H +
Sbjct: 455 CSEWDK-----------AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGII 503
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K G D + +ALV+MY KCG + A +VF +S +SWT++I G A H + AL
Sbjct: 504 CKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDAL 563
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
QLF M+ GV PN VTF+ L ACS+ G+V E L YF++M+K Y + P M+HY C++D+
Sbjct: 564 QLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDL 623
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R+G + +A +FI +M EPNE++W + CR HGN+ELG AA+++L K ++ +Y
Sbjct: 624 LSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATY 683
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L + ++ +G ++D ++++ +E+ + + SWI + ++ F D HP+ +I+
Sbjct: 684 VLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIY 743
Query: 655 KVLDEL 660
L+EL
Sbjct: 744 AKLEEL 749
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 268/548 (48%), Gaps = 36/548 (6%)
Query: 39 RSGSKLIQLNGNSEPVRSLGFQEALSVLTE--GPKVQTSSYVSLLQECVNRKSLSNAEII 96
R+ + I + +P + G + SV + +Q V LL++CV+ + L A+ +
Sbjct: 31 RNSALTITHSAIQKPFATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTV 90
Query: 97 HAHIVKT--GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
H ++K+ +H ++ + + Y KC +++ A ++FD + + N SWT LI+G +N
Sbjct: 91 HGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENG 150
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
F +M G +P L C L+SI LG +HA +V T V
Sbjct: 151 LFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVST 210
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L ++Y+ + + K FN + E NV+SW +I N + F +M+ EG+ P
Sbjct: 211 ALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTP 270
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ T ++ G + + +V ++LG SN V +++ + KCG + EA+ +F
Sbjct: 271 DAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF 330
Query: 335 DGMSHVNL----VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+ SH WNAMI+G+ + S N +AL +F+K+ + + D YT
Sbjct: 331 N--SHFITCRFNAPWNAMISGYLR---------SGFN--EKALELFAKMCQNDIYLDHYT 377
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ S+ + L L G+++HA +K+G ++ V + A+ N Y KCG +E +VF M
Sbjct: 378 YCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRM 437
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R LISWTS++T ++ S +A+++F +M G+ PNQ TF L +C+N L
Sbjct: 438 EDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCAN-------L 490
Query: 510 GYFEMMQKEYKI--KPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E Q+ + I K +D C L+DM+ + GC+ +A ++ + V W+
Sbjct: 491 CLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAI 549
Query: 564 IAGCRRHG 571
IAG +HG
Sbjct: 550 IAGHAQHG 557
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/695 (31%), Positives = 366/695 (52%), Gaps = 24/695 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T ++L C + + + +H +K ++ V L+++Y KCG + +AQ
Sbjct: 287 PDVAT--LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQ 344
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSS 187
+F NVVSW +++ G+ + ML G VT+ A+ C
Sbjct: 345 VIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFE 404
Query: 188 LESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
+ K++H Y +K + ++ V N+ + Y+ CGSL+ A + F IR K V SW
Sbjct: 405 ESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNA 464
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+IG ++ + L + +M S G+ P+ FT+ S+ S C + SL++G +VH L I+
Sbjct: 465 LIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ V S++ LY+ CG + A LFD M LV+WN M+ G+ Q
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQ------------ 572
Query: 367 NGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG E ALS+F ++ G++P + S+ CS L +L G + H LK + +
Sbjct: 573 NGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFI 632
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
++++MY K G + + +VF + R++ SW +M+ G+ H + +A++LFE+M G
Sbjct: 633 ACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGH 692
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
P+++TF+G L AC+++G+V+E L Y + M+ + + P + HY C+IDM VR G ++EA
Sbjct: 693 CPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEAL 752
Query: 546 DF-IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
++M EP IW+ ++ CR H N+E+G A +L +P+ E+Y +L +++ +
Sbjct: 753 KIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGS 812
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
G+W++V V+ +E L + SWI + KV+SF + EI + L +
Sbjct: 813 GKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREI 872
Query: 665 KCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
GY+ S +L++EE HSEKLAI +GL+ T + + V K+ +C DCH
Sbjct: 873 GKMGYRPDTSSVQHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCH 932
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
N K+I+ + REI+VRD+KR H F NG C+C D+
Sbjct: 933 NAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDY 967
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/510 (27%), Positives = 250/510 (49%), Gaps = 34/510 (6%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +++ C + +H +VKT +D FV LV+ YG G++ +A +VF +
Sbjct: 186 TFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIM 245
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN----YPTNVTLGTALTACSSLESI 191
P N+VSW S+I + N E + M+E + P TL T L C+ I
Sbjct: 246 PERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREI 305
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+GK +H +K + + V N+L +YS CG +N A F KNV+SW T++G
Sbjct: 306 GVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGF 365
Query: 252 GENGEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
G+ + +ML+ G ++ +E T+ + VC L ++H +K +
Sbjct: 366 SAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVH 425
Query: 310 NLR-VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N V N+ + Y KCG + A ++F + + +WNA+I G++Q D
Sbjct: 426 NNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSD----------- 474
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+L + ++ SSG+ PDL+T S+L+ CS++ +L+ G+++H L ++ D V +
Sbjct: 475 PRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYIS 534
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y CG + A +F M +TL+SW +M+ G+ + +AL LF M+L GV+P
Sbjct: 535 LLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPC 594
Query: 489 QVTFVGALAACS---NAGMVYEALGYFEMMQKEYKIKPVMDH---YMC-LIDMFVRLGCI 541
+++ + ACS + + EA G Y +K +++ C +IDM+ + G +
Sbjct: 595 EISMMSVFGACSLLPSLRLGREAHG--------YALKCLLEDNAFIACSVIDMYAKNGSV 646
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
E+F + E + W+ + G HG
Sbjct: 647 MESFKVFNGLK-ERSVASWNAMVMGYGIHG 675
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 253/520 (48%), Gaps = 32/520 (6%)
Query: 87 RKSLSNAEIIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
RK + IH + ++ D + T ++ +Y CG+ ++++ VFD L + N+ W +
Sbjct: 94 RKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNA 153
Query: 146 LISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
+IS Y +N + +F+ M+ E+G P N T + AC+ + +++G +H VVK
Sbjct: 154 VISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
+ +D V N+L S Y T GS++ A++ F + E+N++SW ++I +NG + +
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLL 273
Query: 265 SKMLSE----GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
+M+ + P+ TL ++ VC + VG VH L +KL + V N++M +
Sbjct: 274 GQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDM 333
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG +++AQ +F ++ N+V+WN M+ G + D+ K + ++
Sbjct: 334 YSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHK-----------TFDLLRQML 382
Query: 381 SSG--MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALVNMYKKCG 437
+ G ++ D T + + +C L +++H +LK F+ ++ +V A V Y KCG
Sbjct: 383 AGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCG 442
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
+ A RVF + ++T+ SW ++I G++ S +L + M +G+ P+ T L+
Sbjct: 443 SLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLS 502
Query: 498 ACSNA-----GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
ACS G L ++++ + Y+ L+ +++ G + A M+
Sbjct: 503 ACSQIKSLKLGKEVHGLIIRNRLERDSFV------YISLLSLYIHCGELSTAHVLFDAME 556
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+ V W+ + G ++G E Q++ + CE
Sbjct: 557 -DKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCE 595
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 146/304 (48%), Gaps = 19/304 (6%)
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVR-NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
G +++G ++H L + SN V ++ +Y CG D+++ +FD + NL W
Sbjct: 92 GRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQW 151
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVAL 404
NA+I+ ++ +++L HN L +F K+ SG+ PD +TF ++ C+ + +
Sbjct: 152 NAVISSYS------RNEL-YHN----VLEMFVKMITESGLLPDNFTFPCVVKACAGVSEV 200
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ G +H L +KT + DV V ALV+ Y G + A RVF M R L+SW SMI F
Sbjct: 201 QVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVF 260
Query: 465 ANHSLSHQALQLFEDMLLA----GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
+++ LS + L M+ P+ T L C+ + G + K
Sbjct: 261 SDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSL 320
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
K V+ + L+DM+ + GCI +A I K++ N V W+ + G G++ F
Sbjct: 321 DKEVVVNN-ALMDMYSKCGCINDA-QVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLL 378
Query: 581 EQLL 584
Q+L
Sbjct: 379 RQML 382
>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
Length = 993
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/677 (30%), Positives = 372/677 (54%), Gaps = 18/677 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K ++ SL+ C + ++ IH+ V +G H ++ LVN+Y G ++EA+
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLE 189
+F N+ R +V+SW ++IS YVQ++ A+ +L+ P N +T +AL ACSS E
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ G+ IHA +++ ++ +GNSL ++YS C S+ + F + +V+S + G
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTG 422
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLGYA 308
+ +R FS M GI+PN T+ ++ C ++ L G +H+ + G
Sbjct: 423 GYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLL 482
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S+ + NS++ +Y CG ++ + +F +++ ++++WNA+IA + + H
Sbjct: 483 SDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVR-----------HGR 531
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
G EA+ +F +G K D + + L+ + L +LE+G Q+H L++K G D V A
Sbjct: 532 GEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNA 591
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
++MY KCG+++ + + + R W ++I+G+A + +A F+ M+ G +P+
Sbjct: 592 TMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPD 651
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTFV L+ACS+AG++ + + Y+ M + + P + H +C++D+ RLG EA FI
Sbjct: 652 YVTFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFI 711
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+M PN++IW ++ R H N+++G AA+ LL+L P D +Y +L +++ + RW
Sbjct: 712 DEMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWV 771
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV +++ + KL++ SW+++K++V +F D H + +I+ LDE++ K + G
Sbjct: 772 DVDKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVG 831
Query: 669 YKQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y S L TDEE HSEKLA+A+GLL P S I + K+ +C DCH K
Sbjct: 832 YVADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFK 891
Query: 724 IITSLTAREIIVRDSKR 740
+++ + REI++RD R
Sbjct: 892 LVSMVFHREIVLRDPYR 908
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 241/504 (47%), Gaps = 24/504 (4%)
Query: 79 SLLQECVNR---KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
SL+ C +R + + IHA + G + ++ T L+++YG G + AQ++F +
Sbjct: 46 SLVTACEHRGWQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEM 105
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P+ NVVSWT+++ N E A+ + M + G L T ++ C +LE G
Sbjct: 106 PQRNVVSWTAIMVALSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGL 165
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+ A+VV SV NSL +++ + A + F+R+ E++ +SW +I
Sbjct: 166 QVTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEE 225
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ S M ++P+ TL S+ SVC + + +G+ +HSL + G ++ + N
Sbjct: 226 VYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN 285
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y G +DEA+ LF MS ++++WN MI+ + Q N EAL
Sbjct: 286 ALVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQ-----------SNSCVEALET 334
Query: 376 FSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+ L + P+ TFSS L CS AL G IHA+ L+ + +++G +L+ MY
Sbjct: 335 LGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYS 394
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KC +E RVF M ++S + G+A A+++F M G++PN +T +
Sbjct: 395 KCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMIN 454
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKP--VMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
C + G ++ + M Y + + D Y+ LI M+ G +E + +
Sbjct: 455 LQGTCKSLGDLHS----YGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSR 510
Query: 551 MDFEPNEVIWSVFIAGCRRHGNME 574
++ + + W+ IA RHG E
Sbjct: 511 IN-NKSVISWNAIIAANVRHGRGE 533
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 235/483 (48%), Gaps = 25/483 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+ AH+V +G V L+ ++G +++A+++FD + + +SW ++IS Y
Sbjct: 167 VTAHVVVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEV 226
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
V DM P TL + ++ C+S + + LG IH+ V + N+
Sbjct: 227 YSKCFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINA 286
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML--SEGIQ 273
L ++YST G L+ A F + ++V+SW T+I + ++ V+ L ++L EG
Sbjct: 287 LVNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEG-P 345
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN T +S C + +L G +H++ ++ + L + NS++ +Y KC +++ +++
Sbjct: 346 PNSMTFSSALGACSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERV 405
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F+ M ++V+ N + G+A + D+A A+ +FS + +G+KP+ T +
Sbjct: 406 FESMPCYDVVSCNVLTGGYAALEDVAN-----------AMRVFSWMRGTGIKPNYITMIN 454
Query: 394 ILTICSRLVALEQ-GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ C L L G +HA +TG LSD + +L+ MY CG +E ++ +F ++ +
Sbjct: 455 LQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNK 514
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++ISW ++I H +A++LF D AG + ++ L++ +N + E
Sbjct: 515 SVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEG---- 570
Query: 513 EMMQKEYKIKPVMD---HYM-CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
M +K +D H + +DM+ + G ++ + P + W+ I+G
Sbjct: 571 -MQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQC-WNTLISGYA 628
Query: 569 RHG 571
R+G
Sbjct: 629 RYG 631
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 182/373 (48%), Gaps = 19/373 (5%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ESI 191
+P SW + +SG + A + M E + L + +TAC E
Sbjct: 1 MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGA 60
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G IHA + + +G +L LY + G + +A + F + ++NV+SWT ++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVAL 120
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
NG + L + +M EG+ N L ++ S+CG + G QV + + G +++
Sbjct: 121 SSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHV 180
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ ++ V +A++LFD M + ++WNAMI+ ++ +K
Sbjct: 181 SVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSK----------- 229
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTIC--SRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+ S + +KPD+ T S++++C S LVAL G IH+L + +G V + AL
Sbjct: 230 CFIVLSDMRHGEVKPDVTTLCSLVSVCASSDLVAL--GSGIHSLCVSSGLHCSVPLINAL 287
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV-RPN 488
VNMY G+++ A +F MS R +ISW +MI+ + + +AL+ +L PN
Sbjct: 288 VNMYSTAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPN 347
Query: 489 QVTFVGALAACSN 501
+TF AL ACS+
Sbjct: 348 SMTFSSALGACSS 360
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR +EA+ + + G K+ L N SL +H VK G D
Sbjct: 527 VRHGRGEEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDS 586
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V+ +++YGKCG M+ K + W +LISGY + + A F M+
Sbjct: 587 HVVNATMDMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSV 646
Query: 170 GNYPTNVTLGTALTACS 186
G P VT L+ACS
Sbjct: 647 GQKPDYVTFVALLSACS 663
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/707 (31%), Positives = 359/707 (50%), Gaps = 68/707 (9%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
T LV G + +A FD +P R + V +++S + + S A+ VF +L +G
Sbjct: 96 TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155
Query: 171 NY-PTNVTLGTALTACSSLESIRLGK--QIHAYVVKYQTEDDTSVGNSLCSLYSTC---- 223
+ P + + ++A + ++ Q+H V+K SV N+L +LY C
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215
Query: 224 ------------------------------GSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G +N+A F + K + W +I +
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY----AS 309
+G F +M+SE + +EFT TS+ S C G VH I+L +
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH--AQMMDLA-------- 359
L V N+++ LY K G + A+++FD M+ ++V+WN +++G+ + +D A
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395
Query: 360 -KDDLS--------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
K+DLS H G +E AL +F+++ + +KP YT++ + C L AL+ G Q
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+HA ++ GF + G AL+ MY KCG + A VF+ M +SW +MI+ H
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGH 515
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL+LF+ M+ G+ P++++F+ L AC++AG+V E YFE M++++ I P DHY
Sbjct: 516 GREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYA 575
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
LID+ R G I EA D IK M FEP IW ++GCR +G+ME G YAA+QL ++ P+
Sbjct: 576 RLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQ 635
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+Y +L + + +AGRW D A V+ L R+ + + SWI + K++ F D HP+
Sbjct: 636 HDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPE 695
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVS 704
+ E+++ L+ + + + GY F L D E HSEKLA+ FGLL P +
Sbjct: 696 AQEVYQFLEVIGARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGA 755
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
+ V+K+ +C DCH + ++ REI+VRD +R H F +G C+C
Sbjct: 756 TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 188/394 (47%), Gaps = 48/394 (12%)
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+D T +V Y + G++ A+ VF+ + V W ++ISGYVQ+ A +F M
Sbjct: 230 KDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFRRM 289
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ----TEDDTSVGNSLCSLYST 222
+ T + L+AC++ GK +H +++ Q E V N+L +LYS
Sbjct: 290 VSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSK 349
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENG---EAVQ-------------------- 259
G + A + F+ + K+V+SW T++ ++G +AV+
Sbjct: 350 GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGY 409
Query: 260 --------GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
L+ F++M +E ++P ++T + CG + +L+ G Q+H+ ++ G+ ++
Sbjct: 410 VHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASN 469
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
N+++ +Y KCG V++A+ +F M +++ V+WNAMI+ L H G E
Sbjct: 470 SAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISA-----------LGQHGHGRE 518
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALV 430
AL +F ++ + G+ PD +F +ILT C+ +++G ++ G L+
Sbjct: 519 ALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLI 578
Query: 431 NMYKKCGRIERASRVFVEMSTRTLIS-WTSMITG 463
++ + GRI A + M S W ++++G
Sbjct: 579 DLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG 612
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 205/495 (41%), Gaps = 100/495 (20%)
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIR--EKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
S SL + + G L A F+ + ++ + ++ A A + F +L
Sbjct: 93 SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152
Query: 269 SEG-IQPNEFTLTSISSVCGTMLSLRVG--AQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
G ++P++++ T++ S G M +L Q+H +K G A+ L V N+++ LY+KC
Sbjct: 153 GSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCD 212
Query: 326 LVD---EAQKLFDGMSHVNLVTWNAMIAGHAQMMDL--AKDDLSAHNGG----------- 369
+ +A+K+ D M + +TW M+ G+ + D+ A+ +G
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 272
Query: 370 -------TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA--LTLKTGFL 420
+A +F ++ S + D +TF+S+L+ C+ G+ +H + L+ F+
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 332
Query: 421 SDVV--VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS------------------- 459
+ V ALV +Y K G+I A R+F M+ + ++SW +
Sbjct: 333 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFK 392
Query: 460 ------------MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV-- 505
M++G+ + LS AL+LF M V+P T+ GA+AAC G +
Sbjct: 393 VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKH 452
Query: 506 --------------------------YEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVR 537
Y G + + + P +D + +I +
Sbjct: 453 GRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQ 512
Query: 538 LGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK---LKPKDC 591
G EA + +M +P+ + + + C G ++ GF+ E + + + P +
Sbjct: 513 HGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGE- 571
Query: 592 ESYAMLLDIFVSAGR 606
+ YA L+D+ +GR
Sbjct: 572 DHYARLIDLLGRSGR 586
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 127/259 (49%), Gaps = 2/259 (0%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
+I I T + +D +++ Y G +++A +VF +P N +SW ++SGYV
Sbjct: 354 VIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGG 413
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E A+ +F M P + T A+ AC L +++ G+Q+HA++V+ E S GN
Sbjct: 414 LSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGN 473
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L ++Y+ CG++N A F + + +SW +I A G++G + L F +M++EGI P
Sbjct: 474 ALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDP 533
Query: 275 NEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
+ + +I + C + G S+ G + ++ L + G + EA+ L
Sbjct: 534 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 334 FDGMS-HVNLVTWNAMIAG 351
M W A+++G
Sbjct: 594 IKTMPFEPTPSIWEAILSG 612
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 8/186 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y + C +L + +HAH+V+ G L+ +Y KCG + +A+ VF +
Sbjct: 436 TYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVM 495
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P ++ VSW ++IS Q+ A+ +F M+ G P ++ T LTAC+ + G
Sbjct: 496 PNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGF 555
Query: 196 QIHAYVVKYQTEDDTSVGNS----LCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGA 250
Y + + S G L L G + A + E W ++
Sbjct: 556 H---YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSG 612
Query: 251 CGENGE 256
C NG+
Sbjct: 613 CRTNGD 618
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 319/565 (56%), Gaps = 16/565 (2%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+H + + V N L YS +L+ A F+ + ++ +SW+ ++G +
Sbjct: 755 RQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKV 814
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G+ + F +++ G +P+ +TL + C + +L++G +H + K G + V
Sbjct: 815 GDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVC 874
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KC +++A+ LFD M +LVTW MI G+A+ E+L
Sbjct: 875 AALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAEC-----------GNANESLV 923
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F K+ G+ PD +++ C++L A+ + I + F DV++GTA+++M+
Sbjct: 924 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 983
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG +E A +F M + +ISW++MI + H +AL LF ML +G+ PN++T V
Sbjct: 984 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 1043
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+AG+V E L +F M ++Y ++ + HY C++D+ R G ++EA I M E
Sbjct: 1044 LLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXE 1103
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+E +W F+ CR H ++ L AA LL+L+P++ Y +L +I+ +AGRWEDVA ++
Sbjct: 1104 KDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIR 1163
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
+L + +L + W+WI + +K + F D HP+S EI+++L L K + GY +
Sbjct: 1164 DLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTN 1223
Query: 675 FELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F L D +E + HSEKLAIAFGL+ TP +PI ++K+ +C DCH F K+++++T
Sbjct: 1224 FVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAIT 1283
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R IIVRD+ R H F G C+C D+
Sbjct: 1284 GRVIIVRDANRFHHFKEGACSCGDY 1308
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 300/537 (55%), Gaps = 19/537 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+AL C +L +R Q+HA + ++ V N L YS +L+ A F+ + +
Sbjct: 67 SALVNCRNLTQVR---QVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVR 123
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +SW+ ++G + G+ + F +++ G +P+ +TL + C + +L++G +H
Sbjct: 124 DSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIH 183
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ K G + V +++ +Y+KC +++A+ LFD M +LVTW MI G+A+
Sbjct: 184 HIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAEC---- 239
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
E+L +F K+ G+ PD +++ C++L A+ + I + F
Sbjct: 240 -------GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKF 292
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV++GTA+++MY KCG +E A +F M + +ISW++MI + H +AL LF
Sbjct: 293 QLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPM 352
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
ML +G+ P+++T L ACS+AG+V E L +F M ++Y ++ + HY C++D+ R G
Sbjct: 353 MLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAG 412
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EA IK M E +E +W F+ CR H ++ L AA LL+L+ ++ Y +L +
Sbjct: 413 RLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSN 472
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +AGRWEDVA +++L + +L +T W+WI + +K + F D HP+S EI+++L
Sbjct: 473 IYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKS 532
Query: 660 LVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKS 711
L K + GY +F L D +E + HSEKLAIAFGL+ TP +PI ++K+
Sbjct: 533 LSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKN 589
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 191/381 (50%), Gaps = 15/381 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
++ Y+S L C N L+ +HA G ++ V L+ Y +++A
Sbjct: 59 RLNPKFYISALVNCRN---LTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYG 115
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD + + VSW+ ++ G+ + F +++ G P N TL + AC L++
Sbjct: 116 LFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKN 175
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+++G+ IH V K+ + D V +L +Y C + A F++++E+++++WT +IG
Sbjct: 176 LQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGG 235
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
E G+A + L F KM EG+ P++ + ++ C + ++ + + + +
Sbjct: 236 YAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLD 295
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + +++ +Y KCG V+ A+++FD M N+++W+AMIA + H G
Sbjct: 296 VILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY-----------HGQGR 344
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVVVGTAL 429
+AL +F + SSGM PD T +S+L CS +E+G + ++ +DV T +
Sbjct: 345 KALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCV 404
Query: 430 VNMYKKCGRIERASRVFVEMS 450
V++ + GR++ A ++ M+
Sbjct: 405 VDLLGRAGRLDEALKLIKSMT 425
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 178/363 (49%), Gaps = 12/363 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
+L+ +H G Q+ V LV Y +++A +FD + + VSW+ ++
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
G+ + F +++ G P N TL + AC L+++++G+ IH V K+ +
Sbjct: 810 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
D V +L +Y C + A F+++ E+++++WT +IG E G A + L F KM
Sbjct: 870 DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
EG+ P++ + ++ C + ++ + + + ++ + +++ ++ KCG V+
Sbjct: 930 EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
A+++FD M N+++W+AMIA + H G +AL +F + SG+ P+
Sbjct: 990 SAREIFDRMEEKNVISWSAMIAAYGY-----------HGQGRKALDLFPMMLRSGILPNK 1038
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T S+L CS +E+G + + + DV T +V++ + GR++ A ++
Sbjct: 1039 ITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIX 1098
Query: 448 EMS 450
M+
Sbjct: 1099 SMT 1101
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 144/272 (52%), Gaps = 3/272 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + +++ C + K+L +IH + K G D FV LV++YGKC +E+A
Sbjct: 831 GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDA 890
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD + ++V+WT +I GY + ++ +F M E G P V + T + AC+ L
Sbjct: 891 RFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 950
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ + I Y+ + + + D +G ++ +++ CG + SA + F+R+ EKNV+SW+ +I
Sbjct: 951 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMI 1010
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A G +G+ + L F ML GI PN+ TL S+ C + G + S + Y+
Sbjct: 1011 AAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE-DYS 1069
Query: 309 SNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS 338
V++ ++ L + G +DEA KL M+
Sbjct: 1070 VRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT 1101
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 3/217 (1%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + V+++ C ++ A II +I + D + T ++++Y KCG +E
Sbjct: 255 EGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVES 314
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD + NV+SW+++I+ Y + Q A+ +F ML +G P +TL + L ACS
Sbjct: 315 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSH 374
Query: 188 LESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWT 245
+ G + + + + Y D + L G L+ A+K + EK+ W
Sbjct: 375 AGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWG 434
Query: 246 TVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+GAC + + V + + +L + P + L S
Sbjct: 435 AFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLS 471
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 3/217 (1%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + V+++ C ++ A I +I + D + T +++++ KCG +E
Sbjct: 931 EGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVES 990
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++FD + NV+SW+++I+ Y + Q A+ +F ML +G P +TL + L ACS
Sbjct: 991 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSH 1050
Query: 188 LESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWT 245
+ G + + + + Y D + L G L+ A+K + EK+ W
Sbjct: 1051 AGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWG 1110
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTS 281
+GAC + + + + +L Q P + L S
Sbjct: 1111 AFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLS 1147
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 6/171 (3%)
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L Q Q+H G L +++V LV Y ++ A +F M R +SW+ M+ G
Sbjct: 751 LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGG 810
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
FA F +++ G RP+ T + AC + + +G + YK
Sbjct: 811 FAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNL--QMGRL-IHHIVYKFGL 867
Query: 524 VMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+DH++C L+DM+ + IE+A KM E + V W+V I G GN
Sbjct: 868 DLDHFVCAALVDMYGKCREIEDARFLFDKM-XERDLVTWTVMIGGYAECGN 917
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/633 (33%), Positives = 338/633 (53%), Gaps = 49/633 (7%)
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD- 209
+ N +P+ + + +D+L N P + +Q+HA ++K
Sbjct: 19 IHNVKPQSSETLKIDLLRNFNSPFEL------------------RQVHAQIIKTNAPLSI 60
Query: 210 ---TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
T VG +C+ + K + ++ W + + A E + + F +
Sbjct: 61 LPLTRVG-LVCAFTPSFHYAQQIFKCVEK-QKPETFVWNSCLKALAEGDSPIDAIMLFYR 118
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
+ + P+ FT +S+ C +L L G +H + K+G+ SNL ++N I++LY CG
Sbjct: 119 LRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGE 178
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIA------GHAQMMDL--------AKDDLSAHNG---- 368
+ EA+ LF+ M ++VTWN MIA H DL + S G
Sbjct: 179 MGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQC 238
Query: 369 --GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA+ +F+K+ +G+K + T ++L C+ L AL+ G +IH + + GF +V +
Sbjct: 239 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 298
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
L++MY KCG +E A +VF EM RT++SW++MI G A H + +AL+LF DM G+
Sbjct: 299 NTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN VTF+G L ACS+ G++ E +F M ++Y I P ++HY C++D+ R G + EA +
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI M +PN V+W + CR H N+E+ A + LL+L P + Y +L +I+ AGR
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGR 478
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
WED A V+ ++ ++ +T WS I + V+ F + HP + +IF+ +EL+E+ +
Sbjct: 479 WEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRL 538
Query: 667 FGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY S L D EE V HSEKLA+ FGL+NTP +PI ++K+ +C DCH+
Sbjct: 539 KGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNLRICEDCHSA 598
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+++ REI+VRD R H F + C+CRD+
Sbjct: 599 FKLISAIVNREIVVRDRNRFHCFNDNSCSCRDY 631
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 193/457 (42%), Gaps = 92/457 (20%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L+ C+N LSN I+H + K G + ++ +V++Y CG M EA+ +F+ +P+
Sbjct: 133 SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192
Query: 139 NVV-------------------------------SWTSLISGYVQNSQPELAIHVFLDML 167
+VV SWTS+I+GYVQ + + AIH+F M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
EAG VT+ L AC+ L ++ LG +IH Y ++ + + + N+L +Y CG L
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A K F + E+ V+SW+ +IG +G A + LR FS M GI+PN T + C
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
M GL+ E ++ F M+ +
Sbjct: 373 HM-----------------------------------GLISEGRRFFASMTRDYGII--P 395
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
I + M+DL H L++ MKP+ + ++L C +E
Sbjct: 396 QIEHYGCMVDLLSRAGLLHEAHEFILNM-------PMKPNGVVWGALLGACRVHKNVEMA 448
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL---ISWTSM---- 460
E+ L+ L+D L N+Y + GR E +RV M R + W+S+
Sbjct: 449 EEAIKHLLELDPLNDGYY-VVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 507
Query: 461 -----ITGFANHSLSHQALQ----LFEDMLLAGVRPN 488
+ G +H + Q Q L E+M L G PN
Sbjct: 508 VVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 544
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 135/557 (24%), Positives = 242/557 (43%), Gaps = 103/557 (18%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR--INVVSWTSLISGYVQN 153
+HA I+KT + +T + V + AQ++F + + W S + +
Sbjct: 47 VHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLKALAEG 106
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
P AI +F + + P T + L AC +L + G+ +H V K + +
Sbjct: 107 DSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQ 166
Query: 214 NSLCSLYSTCGSLNSA----------------------IKA---------FNRIREKNVM 242
N + LY++CG + A IK F+R+ E+NV
Sbjct: 167 NMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR 226
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT++I + G+A + + F+KM G++ NE T+ ++ + C + +L +G ++H
Sbjct: 227 SWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYS 286
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+ G+ N+R+ N+++ +Y+KCG ++EA K+F+ M +V+W+AMI G
Sbjct: 287 NRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG----------- 335
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLKTGFLS 421
L+ H EAL +FS ++ G++P+ TF +L CS + + +G + A +T G +
Sbjct: 336 LAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIP 395
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ +V++ + G L H+A + +M
Sbjct: 396 QIEHYGCMVDLLSRAG-------------------------------LLHEAHEFILNMP 424
Query: 482 LAGVRPNQVTFVGALAAC---SNAGMVYEALGYFEMMQKEYKIKPVMD-HYMCLIDMFVR 537
+ +PN V + L AC N M EA+ + ++ P+ D +Y+ L +++
Sbjct: 425 M---KPNGVVWGALLGACRVHKNVEMAEEAIKHL------LELDPLNDGYYVVLSNIYAE 475
Query: 538 LGCIEEAFDFIKKM-DFEPNEVI-WSV---------FIAGCRRHGNMELGFYAAEQLL-- 584
G E+ K M D + + WS F+AG H + E F E+LL
Sbjct: 476 AGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEE 535
Query: 585 -KLKPKDCESYAMLLDI 600
+LK + +LLDI
Sbjct: 536 MRLKGYVPNTSVVLLDI 552
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 2/185 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K + V++L C + +L IH + + G ++ + L+++Y KCG +EEA
Sbjct: 255 GVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEA 314
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
KVF+ + VVSW+++I G + + E A+ +F DM + G P VT L ACS +
Sbjct: 315 CKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHM 374
Query: 189 ESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIK-AFNRIREKNVMSWTT 246
I G++ A + + Y + L S G L+ A + N + N + W
Sbjct: 375 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 434
Query: 247 VIGAC 251
++GAC
Sbjct: 435 LLGAC 439
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 334/622 (53%), Gaps = 14/622 (2%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F++ L V G V S+Y S+ + C + +H H +K+ D + T +++
Sbjct: 227 FKDMLKV---GMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KC M +A KVF+ LP S+ ++I GY + Q A+ +F + ++L
Sbjct: 284 YAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISL 343
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
ALTACS ++ G Q+H VK + V N++ +Y CG+L A F +
Sbjct: 344 SGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMER 403
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++ +SW +I A +N E V+ L F ML ++P++FT S+ C +L G ++
Sbjct: 404 RDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEI 463
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H IK G + V ++++ +Y KCG++ EA+K+ + V+WN++I+G
Sbjct: 464 HGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISG------- 516
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
S+ A FS++ G+ PD YT++++L +C+ + +E G+QIHA LK
Sbjct: 517 ----FSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQ 572
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
SDV + + LV+MY KCG ++ + +F + R ++W++MI +A H L +A+ LFE
Sbjct: 573 LHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFE 632
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+M L V+PN F+ L AC++ G V + L YF+ M Y + P M+HY C++D+ R
Sbjct: 633 EMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRS 692
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G + EA I+ M FE ++VIW ++ C+ GN+E+ A LL+L P+D +Y +L
Sbjct: 693 GQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLA 752
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ G W +VA ++++ + KL + SWI ++D+V++F D HP+S EI++
Sbjct: 753 NVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTH 812
Query: 659 ELVEKAKCFGYKQQESFELTDE 680
LV++ K GY F L +E
Sbjct: 813 LLVDEMKWAGYVPDIDFMLDEE 834
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 149/521 (28%), Positives = 264/521 (50%), Gaps = 25/521 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+++ +L+ C + +H ++ G D + LV++Y KC +++A +VF
Sbjct: 139 ATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFRE 198
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P N+V W+++I+GYVQN + + +F DML+ G + T + +C+ L + +LG
Sbjct: 199 MPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLG 258
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+H + +K D+ +G + +Y+ C + A K FN + S+ +I
Sbjct: 259 TQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQ 318
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ ++ L F + + +E +L+ + C + G Q+H L +K G N+ V
Sbjct: 319 DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVA 378
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+I+ +Y KCG + EA +F+ M + V+WNA+IA H Q ++ K LS
Sbjct: 379 NTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK-----------TLS 427
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F + S M+PD +T+ S++ C+ AL G +IH +K+G D VG+ALV+MY
Sbjct: 428 LFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYG 487
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG + A ++ + +T +SW S+I+GF++ S A + F ML G+ P+ T+
Sbjct: 488 KCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYAT 547
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIK 549
L C+N + LG ++ + K++ D Y+ L+DM+ + G ++++ F+
Sbjct: 548 VLDVCANMATI--ELGK-QIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAP 604
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
K D+ V WS I HG E + + QLL +KP
Sbjct: 605 KRDY----VTWSAMICAYAYHGLGEKAINLFEEMQLLNVKP 641
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 150/560 (26%), Positives = 265/560 (47%), Gaps = 51/560 (9%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK-------------- 121
++ +LQ+C N K+L+ + +H ++ TG +V L+ Y K
Sbjct: 8 TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67
Query: 122 -----------------CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
GNM AQ +FD++P +VVSW SL+S Y+ N +I +F+
Sbjct: 68 PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
M T L ACS +E LG Q+H ++ E+D G++L +YS C
Sbjct: 128 RMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCK 187
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
L+ A + F + E+N++ W+ VI +N ++GL+ F ML G+ ++ T S+
Sbjct: 188 KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFR 247
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + + ++G Q+H +K +A + + + + +Y KC + +A K+F+ + + +
Sbjct: 248 SCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQS 307
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
+NA+I G+A+ + G +AL IF L + + D + S LT CS +
Sbjct: 308 YNAIIVGYAR-----------QDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRH 356
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+G Q+H L +K G ++ V +++MY KCG + A +F EM R +SW ++I
Sbjct: 357 LEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAH 416
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKP 523
+ + L LF ML + + P+ T+ + AC+ +AL Y E+ + K
Sbjct: 417 EQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQ----QALNYGTEIHGRIIKSGM 472
Query: 524 VMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
+D ++ L+DM+ + G + EA +++ E V W+ I+G E
Sbjct: 473 GLDWFVGSALVDMYGKCGMLMEAEKIHARLE-EKTTVSWNSIISGFSSQKQSENAQRYFS 531
Query: 582 QLLKLK-PKDCESYAMLLDI 600
Q+L++ D +YA +LD+
Sbjct: 532 QMLEMGIIPDNYTYATVLDV 551
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 199/430 (46%), Gaps = 53/430 (12%)
Query: 173 PTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
PT +T L CS+L+++ GKQ+H ++ V N L Y +N A K
Sbjct: 3 PTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFK 62
Query: 232 AFNRIREKNVMSWTTVI-GACG------------------------------ENGEAVQG 260
F+R+ +++V+SW T+I G G NG +
Sbjct: 63 VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKS 122
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
+ F +M S I + T I C + +G QVH L I++G+ +++ ++++ +
Sbjct: 123 IEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KC +D+A ++F M NLV W+A+IAG+ Q ++ E L +F +
Sbjct: 183 YSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQ-----------NDRFIEGLKLFKDML 231
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
GM T++S+ C+ L A + G Q+H LK+ F D ++GTA ++MY KC R+
Sbjct: 232 KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMF 291
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A +VF + S+ ++I G+A +AL +F+ + + ++++ GAL ACS
Sbjct: 292 DAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS 351
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPN 556
E + + +K + +C ++DM+ + G + EA ++M+ +
Sbjct: 352 VIKRHLEGIQLHGL-----AVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRD 405
Query: 557 EVIWSVFIAG 566
V W+ IA
Sbjct: 406 AVSWNAIIAA 415
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 155/303 (51%), Gaps = 4/303 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N E V++L +S+L + +Y S+++ C +++L+ IH I+K+G D+
Sbjct: 419 NEEIVKTLSL--FVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDW 476
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
FV + LV++YGKCG + EA+K+ L VSW S+ISG+ Q E A F MLE
Sbjct: 477 FVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEM 536
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P N T T L C+++ +I LGKQIHA ++K Q D + ++L +YS CG++ +
Sbjct: 537 GIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDS 596
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F + +++ ++W+ +I A +G + + F +M ++PN S+ C M
Sbjct: 597 RLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHM 656
Query: 290 LSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNA 347
+ G + G + + ++ L + G V+EA KL + M + V W
Sbjct: 657 GYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRT 716
Query: 348 MIA 350
+++
Sbjct: 717 LLS 719
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/638 (32%), Positives = 344/638 (53%), Gaps = 20/638 (3%)
Query: 45 IQLNGNSEPVRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI 100
+ LNG V++ F AL E K + S+V LL C R + +H +
Sbjct: 248 VMLNGY---VKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLV 304
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
+++G D V ++ +Y KCGN+ +A+K+FD +P+ + V+W LI+GYVQN + A+
Sbjct: 305 IRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAV 364
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F M+ +G ++T + L + S++ K++H+Y+V++ D + ++L +Y
Sbjct: 365 ALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIY 424
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
G + A K F + +V T +I NG V+ L F ++ EG+ PN T+
Sbjct: 425 FKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMA 484
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
S+ C + SL++G ++H +K G + +V +SI Y+Y K G +D A + F M
Sbjct: 485 SVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK 544
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICS 399
+ V WN MI +Q NG E A+ +F ++ +SG K D + S+ L+ C+
Sbjct: 545 DSVCWNLMIVSFSQ------------NGKPELAIDLFRQMGTSGTKFDSVSLSATLSACA 592
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
AL G+++H ++ F+SD V + L++MY KCG++ A VF M + +SW S
Sbjct: 593 NYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNS 652
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
+I + NH + L LF +M+ AG++P+ VTF+ ++AC +AG+V E + YF M +EY
Sbjct: 653 IIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEY 712
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
I M+H+ C++D++ R G + EAFD IK M F P+ W + CR HGN+EL A
Sbjct: 713 GICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLA 772
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
++ L++L P + Y +L ++ AG WE V V++L +E+ + + +SWI + +
Sbjct: 773 SKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHM 832
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
F DG HPQS EI+ +L L+ + + GY Q L
Sbjct: 833 FSAADGCHPQSVEIYLILKNLLLELRKHGYVPQPYLPL 870
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 248/492 (50%), Gaps = 21/492 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA ++ G + + + ++ +Y C + ++ +F L + W LI G+
Sbjct: 98 IHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGC 157
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ A+ F ML + P T + AC L ++ L K +H D +G+S
Sbjct: 158 FDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSS 217
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L LY+ G ++ A F+ + ++ + W ++ +NG+ L F +M + ++PN
Sbjct: 218 LIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPN 277
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ + SVC T +R G Q+H L I+ G+ S+ V N+I+ +Y KCG + +A+K+FD
Sbjct: 278 SVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFD 337
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSI 394
M + VTWN +IAG+ Q NG T EA+++F + +SG+K D TF+S
Sbjct: 338 IMPQTDTVTWNGLIAGYVQ------------NGFTDEAVALFKAMVTSGVKLDSITFASF 385
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L + +L+ +++H+ ++ G DV + +ALV++Y K G +E A + F + + +
Sbjct: 386 LPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDV 445
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG---Y 511
T+MI+G+ + L+ +AL LF ++ G+ PN +T L AC A + LG +
Sbjct: 446 AVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPAC--AALASLKLGKELH 503
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
++++K ++ V + M+ + G ++ A+ F ++M + + V W++ I ++G
Sbjct: 504 CDILKK--GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNG 560
Query: 572 NMELGFYAAEQL 583
EL Q+
Sbjct: 561 KPELAIDLFRQM 572
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/608 (35%), Positives = 334/608 (54%), Gaps = 28/608 (4%)
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV------VKYQTEDDTSV 212
A+ + D+ AG V+L + C ++ G+ IH +V T V
Sbjct: 50 ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE-NGEAVQGLRFFSKMLSEG 271
NSL S+Y+ G L+ A++ F + ++NV+SWTTV+ A G + LRF +M +G
Sbjct: 110 SNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRDG 169
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ N +T +S+ CGT L A +H+ IK+G S++ VR+S++ Y+K G +D +
Sbjct: 170 VAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGR 226
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+FD M +LV WN++IAG AQ D G A+ +F ++ SG + T
Sbjct: 227 GVFDEMVTCDLVVWNSIIAGFAQSGD-----------GVGAMELFMRMKESGFLANQGTL 275
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+S+L C+ +V LE G Q+HA LK + D+++ AL++MY KCG + A +F M
Sbjct: 276 TSVLRACTGMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHD 333
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R +ISW++MI+G A + S +AL++F+ M G PN +T VG L ACS+AG+V + Y
Sbjct: 334 RDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHY 393
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F M K + I+P +H C++D+ R G ++EA FI +M FEP+ VIW + CR H
Sbjct: 394 FRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHK 453
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
N L YAA ++LKL+P+D + +L +I+ +W + R++ + + SWI
Sbjct: 454 NATLASYAATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWI 513
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVY 686
+ V+ F + HP S I + L+ L+ +AK GY Q F L D +E Y
Sbjct: 514 ELGKLVHVFIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKY 573
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLAIAFG +N+ P+ ++K+ +C DCH F K+++ + II+RD R H F +
Sbjct: 574 HSEKLAIAFGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQH 633
Query: 747 GHCTCRDF 754
G C+C D+
Sbjct: 634 GVCSCGDY 641
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 193/404 (47%), Gaps = 30/404 (7%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHI------VKTGSHQD 108
F AL++L + G + S L++ CV ++ + IH H+ +H
Sbjct: 47 FTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGS 106
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ-NSQPELAIHVFLDML 167
FV LV++Y K G +++A ++F +P+ NVVSWT++++ + + A+ ++M
Sbjct: 107 LFVSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G + T + L AC + + +HA ++K + D V +SL Y G L+
Sbjct: 167 RDGVAANSYTFSSVLGACGTPGVL---AAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
S F+ + +++ W ++I ++G+ V + F +M G N+ TLTS+ C
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
M+ L VG QVH+ +K Y +L + N+++ +Y KCG + +A LF M ++++W+
Sbjct: 284 GMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWST 341
Query: 348 MIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
MI+G AQ NG EAL +F + + G P+ T +L CS +E
Sbjct: 342 MISGLAQ------------NGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVED 389
Query: 407 G-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
G ++ G + +V++ + G+++ A + EM
Sbjct: 390 GWHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEM 433
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 151/297 (50%), Gaps = 11/297 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL L E G + ++ S+L C L+ +HA I+K G D FV + L
Sbjct: 156 KEALRFLVEMRRDGVAANSYTFSSVLGACGTPGVLA---AMHADIIKVGLDSDVFVRSSL 212
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++ Y K G+++ + VFD + ++V W S+I+G+ Q+ A+ +F+ M E+G
Sbjct: 213 IDAYMKLGDLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQ 272
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
TL + L AC+ + + +G+Q+HA+V+KY + D + N+L +Y CG L A F+R
Sbjct: 273 GTLTSVLRACTGMVMLEVGRQVHAHVLKY--DRDLILHNALLDMYCKCGCLLDADALFSR 330
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ +++V+SW+T+I +NG +V+ L+ F M +EG PN T+ + C + G
Sbjct: 331 MHDRDVISWSTMISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDG 390
Query: 296 AQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
S+ G N ++ L + G +DEA K M + V W ++
Sbjct: 391 WHYFRSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLG 447
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/628 (34%), Positives = 339/628 (53%), Gaps = 48/628 (7%)
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
+D L P+ T + AC + LGK++HA+ + N L +Y+ C
Sbjct: 52 VDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKC 111
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM---------------L 268
GSL A F+ I +K++ SW T+I G Q + F +M +
Sbjct: 112 GSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYV 171
Query: 269 SEG-----------IQPNE------FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
S+G +Q NE FTL+S + + SLR G ++H I+ G +
Sbjct: 172 SQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDE 231
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V +++ LY KCG ++EA+ +FD M+ ++V+W MI H D K E
Sbjct: 232 VVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMI--HRCFEDGRK---------KE 280
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
S+F L SG++P+ YTF+ +L C+ L A + G+++H + G+ +ALV+
Sbjct: 281 GFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVH 340
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
+Y KCG E A RVF +M L+SWTS+I G+A + ALQ FE +L +G +P+++T
Sbjct: 341 VYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEIT 400
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
FVG L+AC++AG+V L YF +++++ + DHY C+ID+ R G +EA + I M
Sbjct: 401 FVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNM 460
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+P++ +W+ + GCR HGN+EL AA+ L +L+P++ +Y L +I+ +AG W +
Sbjct: 461 PMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTEET 520
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
V+N + + SWI IK +V+ F D HP+ ++I + L EL +K K GY
Sbjct: 521 KVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGYVA 580
Query: 672 QESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
+F L D +E YHSEKLA+AFG+++T +PI V K+ C DCHN +K I+
Sbjct: 581 DTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKYIS 640
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ R+IIVRDS R H FV+G C+C+D+
Sbjct: 641 KIVQRKIIVRDSNRFHCFVDGSCSCKDY 668
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/489 (26%), Positives = 235/489 (48%), Gaps = 58/489 (11%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
+EA+ L P+ Y +L+ C+ + L + +HAH + + L+++
Sbjct: 48 LKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHM 107
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG++ +AQ +FD +P+ ++ SW ++ISGY + E A +F +M N+ N +
Sbjct: 108 YAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVI 167
Query: 179 GTALTACSSLESI--------------------------------RLGKQIHAYVVKYQT 206
++ +E++ R GK+IH Y+++
Sbjct: 168 SGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGL 227
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
E D V +L LY CGSLN A F+++ +K+++SWTT+I C E+G +G F
Sbjct: 228 ELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRD 287
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
++ G++PNE+T + + C + + ++G +VH ++GY ++++++Y KCG
Sbjct: 288 LMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGN 347
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMK 385
+ A+++F+ M +LV+W ++I G+AQ NG + AL F L SG K
Sbjct: 348 TETARRVFNQMPRPDLVSWTSLIVGYAQ------------NGQPDMALQFFESLLRSGTK 395
Query: 386 PDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD TF +L+ C+ ++ G E H++ K G + ++++ + GR + A
Sbjct: 396 PDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAEN 455
Query: 445 VFVEMSTRT-LISWTSMITG---FANHSLSHQALQ-LFEDMLLAGVRP-NQVTFVGALAA 498
+ M + W S++ G N L+ +A + LFE + P N T++
Sbjct: 456 IIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFE------LEPENPATYITLSNI 509
Query: 499 CSNAGMVYE 507
+NAG+ E
Sbjct: 510 YANAGLWTE 518
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF ++ G + ++ +L C + + + +H ++ + G F + LV+
Sbjct: 281 GFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVH 340
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
VY KCGN E A++VF+ +PR ++VSWTSLI GY QN QP++A+ F +L +G P +T
Sbjct: 341 VYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEIT 400
Query: 178 LGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
L+AC+ + +G + H+ K+ + L + G A + +
Sbjct: 401 FVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNM 460
Query: 237 REK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
K + W +++G C +G R +K L E N T ++S++
Sbjct: 461 PMKPDKFLWASLLGGCRIHGNIELAER-AAKALFELEPENPATYITLSNI 509
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/656 (30%), Positives = 358/656 (54%), Gaps = 58/656 (8%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S + LL +C +S + +HA I+K+ + F+ L++VYGKCG ++ A+K+
Sbjct: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
Query: 132 FD-------------------------------NLPRINVVSWTSLISGYVQNSQPELAI 160
FD +P+++ SW S+ISG+ Q+ + + A+
Sbjct: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEAL 136
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
F M G + G+AL+AC+ L+ ++LG QIH+ V + D +G++L +Y
Sbjct: 137 VYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY 196
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
S CG + A F+ + ++ +SW ++I +NG + L+ F +M+ G++P+E TL
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLA 256
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
S+ S C T+ +++ G Q+H+ +K + ++L + N+++ +Y KC ++EA+ +FD M
Sbjct: 257 SVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPI 316
Query: 340 VNLVTWNAMIAGHAQMMD-----------LAKDDLS--------AHNG-GTEALSIFSKL 379
++V+ +M++G+A+ + KD ++ NG EAL +F L
Sbjct: 317 RSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLL 376
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL------SDVVVGTALVNMY 433
+ P YTF ++L C+ L L+ G Q H+ LK GF SDV VG +L++MY
Sbjct: 377 KRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMY 436
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG +E RVF M + +SW +MI G+A + ++AL++F ML +G P+ VT +
Sbjct: 437 MKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMI 496
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+AG++ E YF M ++ + P+ DHY C++D+ R G +EEA + I++M
Sbjct: 497 GVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSM 556
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
+P+ ++W +A C+ H N++LG Y ++LL++ P++ Y +L +++ W++V V
Sbjct: 557 QPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRV 616
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ L R+ + + SWI I+ ++ F D H + EI+ VL ++++ K GY
Sbjct: 617 RKLMRQRGVVKQPGCSWIEIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGY 672
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 227/454 (50%), Gaps = 57/454 (12%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL + G V S+ S L C + L IH+ + ++ D ++ +
Sbjct: 132 FDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSA 191
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCG +E AQ VFD + + VSW SLI+ Y QN + A+ +F++M++ G P
Sbjct: 192 LVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPD 251
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSA---- 229
VTL + ++AC+++ +I+ G+QIHA VVK + +D +GN+L +Y+ C +N A
Sbjct: 252 EVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIF 311
Query: 230 ----IKA-----------------------FNRIREKNVMSWTTVIGACGENGEAVQGLR 262
I++ F+ + K+V++W +I C +NGE + L
Sbjct: 312 DMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALI 371
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA------SNLRVRNS 316
F + E + P +T ++ + C + L++G Q HS +K G+ S++ V NS
Sbjct: 372 LFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNS 431
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSI 375
++ +Y+KCG V+ ++F M + V+WNAMI G+AQ NG G +AL +
Sbjct: 432 LIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQ------------NGFGNKALEV 479
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYK 434
F K+ SG PD T +L CS L++G ++T + G + T +V++
Sbjct: 480 FCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLG 539
Query: 435 KCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ G +E A + EMS + I W S++ H
Sbjct: 540 RAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 328/586 (55%), Gaps = 13/586 (2%)
Query: 86 NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
N S+ + HA +K D FV + L+N+Y K G + EA++VFD +P N V+W +
Sbjct: 123 NLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWAT 182
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+ISGY A VF M + L+A + E + GKQIH VK
Sbjct: 183 MISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTG 242
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
S+ N+L ++Y+ CGSL+ +++ F +KN ++W+ +I ++G++ + L+ FS
Sbjct: 243 LLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFS 302
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M GI P+EFTL + + C ++ G QVH+ +KLG+ S L + +++ +Y K G
Sbjct: 303 RMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSG 362
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGM 384
+ ++A+K F+ + +LV W +MIAG+ Q NG E ALS++ ++ G+
Sbjct: 363 VTEDARKGFNYLQQPDLVLWTSMIAGYVQ------------NGENEDALSLYCRMQMEGI 410
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
P+ T +S+L CS L A +QG QIHA T+K G +V +G+AL MY KCG +E +
Sbjct: 411 LPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNI 470
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
VF M R +ISW +MI+G + + +AL+LFE+M +P+ VTFV L+ACS+ G+
Sbjct: 471 VFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGL 530
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V YF MM E+ + P ++HY C++D+ R G + EA +FI+ + +W + +
Sbjct: 531 VDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILL 590
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE 624
CR + N ELG YA E+L++L ++ +Y +L I+ + GR EDV V+++ + +S+
Sbjct: 591 GACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSK 650
Query: 625 TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
SWI +K V+ F D +HP EI + L ++ K GY+
Sbjct: 651 EPGCSWIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQ 696
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 275/571 (48%), Gaps = 52/571 (9%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYGKCGNMEEAQKVFD 133
SS+ SL+Q ++KSL +HA I+K S ++ L+N Y KC ++ +A+ VFD
Sbjct: 9 SSFNSLVQ-FTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFD 67
Query: 134 NLPRINVVSWTSLISGYVQN--SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+ +V+SW LI+GY Q + + +F M P T TA S+L SI
Sbjct: 68 RIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSI 127
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+Q HA +K D VG+SL ++Y G L A + F+R+ E+N ++W T+I
Sbjct: 128 FFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGY 187
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
A + F M E NEF TS+ S + G Q+H L +K G L
Sbjct: 188 AIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFL 247
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ N+++ +Y KCG +D++ ++F+ + N +TW+AMI G+AQ D K
Sbjct: 248 SILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK----------- 296
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL +FS+++ +G+ P +T +L CS A+E+G+Q+H LK GF S + + TALV+
Sbjct: 297 ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVD 356
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY K G E A + F + L+ WTSMI G+ + + AL L+ M + G+ PN++T
Sbjct: 357 MYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELT 416
Query: 492 FVGALAACSNAG----------------------------MVYEALGYFEMMQKEYKIKP 523
L ACSN +Y G E ++ P
Sbjct: 417 MASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMP 476
Query: 524 VMD--HYMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFY 578
D + +I + G +EA + ++M D +P++V + ++ C G ++ G+
Sbjct: 477 ERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWL 536
Query: 579 AAEQLLK---LKPKDCESYAMLLDIFVSAGR 606
+ L PK E YA ++D+ AG+
Sbjct: 537 YFRMMFDEFGLLPK-VEHYACMVDVLSRAGK 566
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 228/432 (52%), Gaps = 34/432 (7%)
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSLCSLYSTCGSLNSAI 230
+P N++ +L + +S++ G+ +HA ++K + + NSL + Y+ C L A
Sbjct: 4 HPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAK 63
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQG-------LRFFSKMLSEGIQPNEFTLTSIS 283
F+RI K+V+SW +I NG + QG + F +M ++ I PN T + I
Sbjct: 64 LVFDRIHNKDVISWNCLI-----NGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIF 118
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
+ + S+ G Q H++ IK+ ++ V +S++ +Y K GL+ EA+++FD M N V
Sbjct: 119 TAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEV 178
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
TW MI+G+A + LA EA +F + + + F+S+L+ +
Sbjct: 179 TWATMISGYA-IQRLAG----------EAFEVFELMRREEEDVNEFAFTSVLSALAVPEF 227
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
++ G+QIH L +KTG L + + ALV MY KCG ++ + +VF + + I+W++MITG
Sbjct: 228 VDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITG 287
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+A SH+AL+LF M AG+ P++ T VG L ACS+A V E + K +
Sbjct: 288 YAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLK-LGFES 346
Query: 524 VMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFY 578
+ L+DM+ + G E+A F++++ +P+ V+W+ IAG ++G E L Y
Sbjct: 347 QLYIMTALVDMYAKSGVTEDARKGFNYLQ----QPDLVLWTSMIAGYVQNGENEDALSLY 402
Query: 579 AAEQLLKLKPKD 590
Q+ + P +
Sbjct: 403 CRMQMEGILPNE 414
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 199/385 (51%), Gaps = 13/385 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E V ++ S+L + + + + IH VKTG ++ LV +Y KCG++++
Sbjct: 206 EEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDD 265
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
+ +VF+ N ++W+++I+GY Q+ A+ +F M AG P+ TL L ACS
Sbjct: 266 SLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSD 325
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ GKQ+H Y++K E + +L +Y+ G A K FN +++ +++ WT++
Sbjct: 326 ACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSM 385
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NGE L + +M EGI PNE T+ S+ C + + G Q+H+ IK G
Sbjct: 386 IAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGL 445
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + +++ +Y KCG ++E +F M ++++WNAMI+G LS +
Sbjct: 446 GLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISG-----------LSQNG 494
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL-KTGFLSDVVVG 426
G EAL +F ++ KPD TF ++L+ CS + ++ G + + G L V
Sbjct: 495 YGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHY 554
Query: 427 TALVNMYKKCGRIERASRVFVEMST 451
+V++ + G++ A + F+E +T
Sbjct: 555 ACMVDVLSRAGKLYEA-KEFIESTT 578
>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 692
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 321/589 (54%), Gaps = 19/589 (3%)
Query: 173 PTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P+++T AL + S L +R G+Q+HA +K + + V SL +LY+ CG L+ A +
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 174
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + + +SWT +I A + G+ + + + G++P+ FT + + C +
Sbjct: 175 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 234
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G V + G A ++ V + + LY+KCG + +A+++FD M + V W AM+ G
Sbjct: 235 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 294
Query: 352 HAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+A NG EAL +F + + G++PD Y + L+ C+RL AL+ G Q
Sbjct: 295 YAS------------NGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA 342
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ FL + V+GTAL++MY KCG A VF +M + +I W +MI G
Sbjct: 343 IRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHE 402
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
A L M +GV+ N TF+G L +C++ G++ + YF M K Y I P ++HY C
Sbjct: 403 KTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 462
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA I M N VI + GC+ H N EL + QL++L+P +
Sbjct: 463 IVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWN 522
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y ML +I+ + GRWED A ++ +E+ + + SW+ + KV+ F+ D HP S
Sbjct: 523 SGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 582
Query: 651 AEIFKVLDELVEKAKCFGYKQQES---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSP 705
+I+K LDEL + K GY+ F++ DEE V+HSEKLAIAF LL T
Sbjct: 583 DQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGET 642
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH IK+I+ +T REIIVRD+ R H F +G C+C D+
Sbjct: 643 IRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDY 691
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 172/361 (47%), Gaps = 12/361 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L E +HA +K SH + V+T L+ +Y +CG + AQ+VFD +P + VSWT+LI+
Sbjct: 134 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 193
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
Y+ A+HV + G P + T LTAC+ + + G+ + +
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V + LY CG + A + F+++R+K+ ++W ++G NG + L F M +
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 313
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
EG++P+ + + S C + +L +G Q + + N + +++ +Y KCG E
Sbjct: 314 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 373
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A +F M +++ WNAMI G ++ H A ++ ++ SG+K +
Sbjct: 374 AWVVFQQMRKKDIIVWNAMILGLG---------MTGHE--KTAFTLIGQMEKSGVKLNDN 422
Query: 390 TFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TF +L C+ ++ G + H +T + +V++ + G ++ A ++ +
Sbjct: 423 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDD 482
Query: 449 M 449
M
Sbjct: 483 M 483
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A + G + + + V +L C L+ E + + G Q FV T V++Y K
Sbjct: 207 ARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVK 266
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG M +A++VFD + + V+W +++ GY N P A+ +FL M G P + A
Sbjct: 267 CGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGA 326
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+ L ++ LG+Q V + D+ +G +L +Y+ CGS A F ++R+K++
Sbjct: 327 LSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDI 386
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W +I G G +M G++ N+ T + C ++ G +
Sbjct: 387 IVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 446
Query: 302 GIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
KL Y + R+ + I+ L + GL+ EA +L D M N V A++ G
Sbjct: 447 MTKL-YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGG 498
>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
Length = 645
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 321/589 (54%), Gaps = 19/589 (3%)
Query: 173 PTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P+++T+ AL + S L +R G+Q+HA +K + + V SL SLY+ CG L+ A +
Sbjct: 68 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 127
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + + + WT +I A + G+ + + + G++P+ FT + + C +
Sbjct: 128 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 187
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G V + G A ++ V + + LY+KCG + +A+++FD M H + V W AM+ G
Sbjct: 188 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 247
Query: 352 HAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+A NG EAL +F + + GMKPD Y + L+ C+RL AL+ G Q
Sbjct: 248 YAS------------NGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA 295
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ FL + V+GTAL++MY KCG A VF +M + +I W +MI G
Sbjct: 296 IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHE 355
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
A L M +GV+ N TF+G L +C++ G++ + YF M K Y I P ++HY C
Sbjct: 356 KIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 415
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA + M N VI + GC+ H N EL + +QL+ L+P +
Sbjct: 416 MVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWN 475
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y ML +I+ + GRWED A ++ + + + + SW+ + KV+ F+ D HP S
Sbjct: 476 SGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 535
Query: 651 AEIFKVLDELVEKAKCFGYKQQES---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSP 705
+I+K LDEL + K GY+ F++ DEE V+HSEKLAIAF LL T
Sbjct: 536 DQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGET 595
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH IK+++ +T REIIVRD+ R H F +G C+C D+
Sbjct: 596 IRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDY 644
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 171/361 (47%), Gaps = 12/361 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L E +HA +K SH + V+T L+++Y KCG + AQ+VFD +P + V WT+LI+
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALITA 146
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
Y+ A+HV + G P + T LTAC+ + + G+ + +
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQS 206
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V + LY CG + A + F+++R K+ ++W ++G NG + L F M +
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
EG++P+ + + S C + +L +G Q + + N + +++ +Y KCG E
Sbjct: 267 EGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVE 326
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A +F M +++ WNAMI G ++ H A ++ ++ SG+K +
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLG---------MTGHE--KIAFALVGQMEKSGVKLNDN 375
Query: 390 TFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TF +L C+ ++ G + H +T + +V++ + G ++ A ++ +
Sbjct: 376 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVDD 435
Query: 449 M 449
M
Sbjct: 436 M 436
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A + G + + + V +L C L+ E + + G Q FV T V++Y K
Sbjct: 160 ARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVK 219
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG M +A++VFD + + V+W +++ GY N P A+ +FL M G P + A
Sbjct: 220 CGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGA 279
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+ L ++ LG+Q V + D+ +G +L +Y+ CGS A F ++R+K++
Sbjct: 280 LSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDI 339
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W +I G G +M G++ N+ T + C ++ G +
Sbjct: 340 IVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 399
Query: 302 GIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
KL Y + R+ + ++ L + GL+ EA +L D M N V A++ G
Sbjct: 400 MTKL-YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGG 451
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/615 (32%), Positives = 340/615 (55%), Gaps = 17/615 (2%)
Query: 143 WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
W L+S + + P A+ VF L + P + T LTAC+ L + + +
Sbjct: 76 WNGLLSAHSRAGAPGAALRVF-RALPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
D V ++L LYS CG++ AI+ F+ + K+ ++W+T++ G V+ L
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
+S+M G+ +E + + C + + R+GA VH ++ ++ S++ +Y
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS 381
K G +D A ++F M + N VTW+A+I+G AQ NG EAL +F +L +
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQ------------NGRAVEALDLFRELQA 302
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
G++P + S L C+ + L+ G+ IH L+ ++GTA+++MY KCG +E
Sbjct: 303 DGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLES 361
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A ++F ++S+R L+ W ++I H H AL LF+++ G++P+ TF L+A S+
Sbjct: 362 ARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSH 421
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+G+V E +F+ M KE+ I+P HY+C++D+ R G +EEA D + M EP IW
Sbjct: 422 SGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWV 481
Query: 562 VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+ ++GC + +ELG A+++L+L+P+D A++ +++ +A +W+ V ++ L ++
Sbjct: 482 ILLSGCLNNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSG 541
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF--ELTD 679
+ +S I +K ++F D HPQ EI K++ +L + + GY + F D
Sbjct: 542 SKKVPGYSLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLD 601
Query: 680 EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
E+ YHSE+LAIAFGLLNT + ++++K+ +C DCH+ IK I+ + REI+VRD+K
Sbjct: 602 EDQLLSYHSERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAK 661
Query: 740 RLHKFVNGHCTCRDF 754
R H F +G C+C D+
Sbjct: 662 RFHHFKDGACSCGDY 676
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/441 (28%), Positives = 227/441 (51%), Gaps = 25/441 (5%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L + ++++ L C L AE + G D FV + L+++Y +CG M
Sbjct: 99 LPSSARPNSTTFTLTLTACARLGDLDAAESVRVRAFAAGYGHDVFVCSALLHLYSRCGAM 158
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
EEA +VFD +PR + V+W+++++G+V +P A+ ++ M E G V + + AC
Sbjct: 159 EEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMREHGVSDDEVVMVGVIQAC 218
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
S + R+G +H ++++ D SL S+Y+ G L+ A + F + +N ++W+
Sbjct: 219 MSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLDVACQVFRMMPYRNDVTWS 278
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-K 304
+I +NG AV+ L F ++ ++G+QP + L S C ++ L++G +H + +
Sbjct: 279 ALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRR 338
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
L + L +++ +Y KCG ++ A+KLF+ +S +LV WNA+IA
Sbjct: 339 LEWQCIL--GTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIAC-----------CG 385
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDV 423
H G +AL++F +LN +G+KPD TF+S+L+ S +E+G+ +K G
Sbjct: 386 THGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAE 445
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDML- 481
+V++ + G +E A+ + M T I+ W +++G L+++ L+L E +
Sbjct: 446 KHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSG----CLNNKKLELGETIAK 501
Query: 482 -LAGVRPNQVTFVGALAACSN 501
+ +RP +G LA SN
Sbjct: 502 KILELRPED---IGVLALVSN 519
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 325/567 (57%), Gaps = 19/567 (3%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+HA+++ S+ L SL T GS+ A + F + + + +++ +
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKVTSKF 167
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ + F+ +ML G + +T TS+ C + +LR+G ++HS + GY S++ V+
Sbjct: 168 GFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQ 227
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEAL 373
+++ LY K + A+K+FD M ++ WN++I+G+ Q NG E++
Sbjct: 228 AALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQ------------NGLPQESI 275
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F + SG +PD T S+L+ CS+L AL+ G +H GF +VV+GT+L+NMY
Sbjct: 276 GLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMY 335
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+CG + +A VF M R +++WT+MI+G+ H QA++LF +M G RPN +TFV
Sbjct: 336 TRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFV 395
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK-MD 552
L+AC+++G++ + F M++ Y + P ++H +C++DMF R G + +A+ FIKK +
Sbjct: 396 AVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIP 455
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
EP +W+ + CR H N +LG AE +L ++P++ Y ML +I+ AGR + V +
Sbjct: 456 KEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEM 515
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-KQ 671
V+N+ +L + +S I I K Y F D HPQ+ I++ LDEL+ + GY
Sbjct: 516 VRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPA 575
Query: 672 QESF--ELTDEES--ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
ES +L +EE A YHSEKLA+AFGLL T I +VK+ +C DCH+ IK I+
Sbjct: 576 PESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISI 635
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REIIVRD R H F +G C+C D+
Sbjct: 636 IADREIIVRDKFRFHHFKDGSCSCLDY 662
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 218/452 (48%), Gaps = 37/452 (8%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L N + +HAHI+ +G H+ ++T L+++ G++ A+++F +P + + SL+
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 163
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ + + ML +G +N T + + AC+ L ++RLGK+IH++V+ D
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 223
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V +L +LY+ + A K F+ + ++ +++W ++I +NG + + F M+
Sbjct: 224 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
G QP+ T+ S+ S C + +L G +H G+ N+ + S++ +Y +CG V +
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 343
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A+++FD M N+VTW AMI+G+ H G +A+ +F+++ + G +P+
Sbjct: 344 AREVFDSMKERNVVTWTAMISGYGM-----------HGYGRQAMELFTEMRAYGPRPNNI 392
Query: 390 TFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV--- 445
TF ++L+ C+ ++ G ++ ++ G + V +V+M+ + G + A +
Sbjct: 393 TFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKK 452
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F+ + WTSM+ H +++ E +L V P
Sbjct: 453 FIPKEPGPAV-WTSMLGACRMHRNFDLGVKVAEHVL--SVEP------------------ 491
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
E G++ M+ Y + MD + +M R
Sbjct: 492 -ENPGHYVMLSNIYALAGRMDRVEMVRNMMTR 522
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 154/271 (56%), Gaps = 3/271 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ S+++ C + +L + IH+H++ G D +V L+ +Y K +
Sbjct: 180 MLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASD 239
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
M+ A+KVFD +P+ +++W SLISGY QN P+ +I +F M+E+G P + T+ + L++
Sbjct: 240 MKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSS 299
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS L ++ G +H Y + + +G SL ++Y+ CG+++ A + F+ ++E+NV++W
Sbjct: 300 CSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 359
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T +I G +G Q + F++M + G +PN T ++ S C + G +V S +K
Sbjct: 360 TAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS-SMK 418
Query: 305 LGYASNLRVRNSI--MYLYLKCGLVDEAQKL 333
Y V +++ + ++ + GL+++A +
Sbjct: 419 EAYGLVPGVEHNVCMVDMFGRAGLLNDAYQF 449
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/582 (35%), Positives = 327/582 (56%), Gaps = 23/582 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN---SLCSLYSTCGSLNSAIKAFNRIRE 238
L C+SL + KQ+ A+ +K D SV + CSL T S+ A F++I +
Sbjct: 27 LPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+++ + T+ ++ F+++L G+ P+++T S+ C + +L G Q+
Sbjct: 84 PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQL 143
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H L IKLG + N+ V +++ +Y C +D A+++FD + +VT+NAMI G+A+
Sbjct: 144 HCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYAR---- 199
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+ EALS+F +L + +KP T S+L+ C+ L AL+ G+ +H K G
Sbjct: 200 -------GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG 252
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F V V TAL++MY KCG ++ A VF M+ R +W++MI +A H +A+ LF+
Sbjct: 253 FNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFK 312
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+M AG P+++TF+G L ACS+ G+V E YF M+ +Y + P + HY C++D+ R
Sbjct: 313 EMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRA 372
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +EEA++FI + P ++W ++ C HGN+ELG EQ+ +L Y +L
Sbjct: 373 GRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILS 432
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
++ AGRWEDV V+ L E + + S + + + V+ F DG+H S ++ + LD
Sbjct: 433 NLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALD 492
Query: 659 ELVEKAKCFGYKQQESF----ELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKST 712
ELV++ K GY S ++ DEE YHSEKLAI FGLLNTP + I VVK+
Sbjct: 493 ELVKELKLVGYVPNTSLVFHADMEDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNL 552
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ K+I+ + R+II+RD +R H F +G C+C D+
Sbjct: 553 RVCGDCHSAAKLISLIFDRQIILRDVQRFHHFKDGKCSCEDY 594
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 204/400 (51%), Gaps = 19/400 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQ 129
T+ +SLL +C + + L + A +KT H D V+T +N + +M+ A
Sbjct: 19 NTTHPLSLLPKCTSLRELKQ---LQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAH 75
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P+ ++V + ++ GY + P A +F +L +G +P + T + L AC+S +
Sbjct: 76 HLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCK 135
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ G+Q+H +K ++ V +L ++Y+ C ++ A + F++I E V+++ +I
Sbjct: 136 ALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMIT 195
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ L F ++ + ++P + T+ S+ S C + +L +G +H K G+
Sbjct: 196 GYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNR 255
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++V +++ +Y KCG +D+A +F+ M+ + W+AMI +A H G
Sbjct: 256 FVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYA-----------IHGHG 304
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTA 428
+A+S+F ++ +G +PD TF +L CS +E+G E + + K G + +
Sbjct: 305 LKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGC 364
Query: 429 LVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+V++ + GR+E A V + R T I W ++++ +H
Sbjct: 365 MVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSH 404
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/571 (35%), Positives = 327/571 (57%), Gaps = 19/571 (3%)
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+R +Q+HA+++ S+ L SL T GS+ A + F + + + +++
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+ G ++ + F+ +ML G + +T TS+ C + +LR+G ++HS + GY S+
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 159
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
+ V+ +++ LY K + A+K+FD M ++ WN++I+G+ Q NG
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQ------------NGLP 207
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
E++ +F + SG +PD T S+L+ CS+L AL+ G +H GF +VV+GT+L
Sbjct: 208 QESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSL 267
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+NMY +CG + +A VF M R +++WT+MI+G+ H QA++LF +M G RPN
Sbjct: 268 INMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNN 327
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
+TFV L+AC+++G++ + F M++ Y + P ++H +C++DMF R G + +A+ FIK
Sbjct: 328 ITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIK 387
Query: 550 K-MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K + EP +W+ + CR H N +LG AE +L ++P++ Y ML +I+ AGR +
Sbjct: 388 KFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMD 447
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V +V+N+ +L + +S I I K Y F D HPQ+ I++ LDEL+ + G
Sbjct: 448 RVEMVRNMMTRRRLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESG 507
Query: 669 Y-KQQESF--ELTDEES--ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y ES +L +EE A YHSEKLA+AFGLL T I +VK+ +C DCH+ IK
Sbjct: 508 YVPAPESLMHDLEEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIK 567
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ + REIIVRD R H F +G C+C D+
Sbjct: 568 HISIIADREIIVRDKFRFHHFKDGSCSCLDY 598
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 195/376 (51%), Gaps = 16/376 (4%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L N + +HAHI+ +G H+ ++T L+++ G++ A+++F +P + + SL+
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ + + ML +G +N T + + AC+ L ++RLGK+IH++V+ D
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 159
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V +L +LY+ + A K F+ + ++ +++W ++I +NG + + F M+
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 219
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
G QP+ T+ S+ S C + +L G +H G+ N+ + S++ +Y +CG V +
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 279
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A+++FD M N+VTW AMI+G+ H G +A+ +F+++ + G +P+
Sbjct: 280 AREVFDSMKERNVVTWTAMISGYGM-----------HGYGRQAMELFTEMRAYGPRPNNI 328
Query: 390 TFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV--- 445
TF ++L+ C+ ++ G ++ ++ G + V +V+M+ + G + A +
Sbjct: 329 TFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKK 388
Query: 446 FVEMSTRTLISWTSMI 461
F+ + WTSM+
Sbjct: 389 FIPKEPGPAV-WTSML 403
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 154/271 (56%), Gaps = 3/271 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ S+++ C + +L + IH+H++ G D +V L+ +Y K +
Sbjct: 116 MLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASD 175
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
M+ A+KVFD +P+ +++W SLISGY QN P+ +I +F M+E+G P + T+ + L++
Sbjct: 176 MKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSS 235
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CS L ++ G +H Y + + +G SL ++Y+ CG+++ A + F+ ++E+NV++W
Sbjct: 236 CSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTW 295
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T +I G +G Q + F++M + G +PN T ++ S C + G +V S +K
Sbjct: 296 TAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFS-SMK 354
Query: 305 LGYASNLRVRNSI--MYLYLKCGLVDEAQKL 333
Y V +++ + ++ + GL+++A +
Sbjct: 355 EAYGLVPGVEHNVCMVDMFGRAGLLNDAYQF 385
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 361/667 (54%), Gaps = 25/667 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQN 153
+HA +V + S Q+ F L Y + G ++ A+ P R + +W +L++ +
Sbjct: 34 LHALLVVSSS-QNLF--PSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRA 90
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
P A+ VF L + P + T ALTAC+ L + + + D V
Sbjct: 91 GSPGAALRVF-RALPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVC 149
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
++L +YS CG++ AI+ F+ + K+ ++W+T++ G V+ L +S+M G+
Sbjct: 150 SALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVA 209
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
+E + + C + R+GA VH ++ G ++ + S++ +Y K G D A+++
Sbjct: 210 EDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQV 269
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFS 392
F M + N V+WNA+I+G AQ NG EAL +F ++++SG++PD
Sbjct: 270 FRMMPYRNAVSWNALISGFAQ------------NGHADEALDLFREMSTSGLQPDSGALV 317
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S L C+ + L+ G+ IH L+ ++GTA+++MY KCG +E A ++F ++S+R
Sbjct: 318 SALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSR 376
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L+ W +MI H H AL LF+++ G++P+ TF L+A S++G+V E +F
Sbjct: 377 DLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWF 436
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ M E+ I+P H +C++D+ R G +EEA + + M EP IW ++GC +
Sbjct: 437 DRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKK 496
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+ELG A+++L+ +P+D A++ +++ +A +W+ V ++ L ++ + +S I
Sbjct: 497 LELGETIAKKILESQPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIE 556
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYH 687
+ ++F D HPQ EI K++ +L + + GY + F D +E YH
Sbjct: 557 VHGTRHAFVMEDQSHPQHQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYH 616
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SE+LAIAFGLLNT + ++++K+ +C DCH+ IK I+ + REI+VRD+KR H F +G
Sbjct: 617 SERLAIAFGLLNTSPGTRLVIIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDG 676
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 677 ACSCGDY 683
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 220/439 (50%), Gaps = 21/439 (4%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L + ++++ L C L AE + G +D FV + L++VY +CG M
Sbjct: 103 LPSSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAM 162
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A +VFD +PR + V+W+++++G+V +P A+ ++ M E G V + + AC
Sbjct: 163 GDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQAC 222
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ + R+G +H +++ D + SL +Y+ G + A + F + +N +SW
Sbjct: 223 TLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWN 282
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-K 304
+I +NG A + L F +M + G+QP+ L S C + L++G +H + +
Sbjct: 283 ALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR 342
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
L + L +++ +Y KCG ++ A+KLF+ +S +LV WNAMIA
Sbjct: 343 LEFQCIL--GTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIAC-----------CG 389
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDV 423
H G +AL++F +LN +G+KPD TF+S+L+ S +E+G+ + + G
Sbjct: 390 THGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTE 449
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLL 482
+V++ + G +E A+ + M T I W ++++G L+++ L+L E +
Sbjct: 450 KHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG----CLNNKKLELGE-TIA 504
Query: 483 AGVRPNQVTFVGALAACSN 501
+ +Q +G LA SN
Sbjct: 505 KKILESQPEDIGVLALVSN 523
>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
Length = 645
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 321/589 (54%), Gaps = 19/589 (3%)
Query: 173 PTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P+++T AL + S L +R G+Q+HA +K + + V SL +LY+ CG L+ A +
Sbjct: 68 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQR 127
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + + +SWT +I A + G+ + + + G++P+ FT + + C +
Sbjct: 128 VFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVAD 187
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G V + G A ++ V + + LY+KCG + +A+++FD M + V W AM+ G
Sbjct: 188 LATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGG 247
Query: 352 HAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+A NG EAL +F + + G++PD Y + L+ C+RL AL+ G Q
Sbjct: 248 YAS------------NGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA 295
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ FL + V+GTAL++MY KCG A VF +M + +I W +MI G
Sbjct: 296 IRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHE 355
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
A L M +GV+ N TF+G L +C++ G++ + YF M K Y I P ++HY C
Sbjct: 356 KTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 415
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA I M N VI + GC+ H N EL + QL++L+P +
Sbjct: 416 IVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWN 475
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y ML +I+ + GRWED A ++ +E+ + + SW+ + KV+ F+ D HP S
Sbjct: 476 SGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 535
Query: 651 AEIFKVLDELVEKAKCFGYKQQES---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSP 705
+I+K LDEL + K GY+ F++ DEE V+HSEKLAIAF LL T
Sbjct: 536 DQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGET 595
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH IK+I+ +T REIIVRD+ R H F +G C+C D+
Sbjct: 596 IRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDY 644
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 172/361 (47%), Gaps = 12/361 (3%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L E +HA +K SH + V+T L+ +Y +CG + AQ+VFD +P + VSWT+LI+
Sbjct: 87 LRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITA 146
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
Y+ A+HV + G P + T LTAC+ + + G+ + +
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V + LY CG + A + F+++R+K+ ++W ++G NG + L F M +
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQA 266
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
EG++P+ + + S C + +L +G Q + + N + +++ +Y KCG E
Sbjct: 267 EGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAE 326
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A +F M +++ WNAMI G ++ H A ++ ++ SG+K +
Sbjct: 327 AWVVFQQMRKKDIIVWNAMILGLG---------MTGHE--KTAFTLIGQMEKSGVKLNDN 375
Query: 390 TFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TF +L C+ ++ G + H +T + +V++ + G ++ A ++ +
Sbjct: 376 TFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRAGLLQEAHQLIDD 435
Query: 449 M 449
M
Sbjct: 436 M 436
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A + G + + + V +L C L+ E + + G Q FV T V++Y K
Sbjct: 160 ARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVK 219
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG M +A++VFD + + V+W +++ GY N P A+ +FL M G P + A
Sbjct: 220 CGEMAKAREVFDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGA 279
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+ L ++ LG+Q V + D+ +G +L +Y+ CGS A F ++R+K++
Sbjct: 280 LSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDI 339
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W +I G G +M G++ N+ T + C ++ G +
Sbjct: 340 IVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 399
Query: 302 GIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
KL Y + R+ + I+ L + GL+ EA +L D M N V A++ G
Sbjct: 400 MTKL-YHISPRIEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGG 451
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/587 (32%), Positives = 330/587 (56%), Gaps = 12/587 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE-AQKVFDNLPRINVVSWTSLISGYVQNS 154
+H H +KT D + T +++Y KC N+ + + ++F++LP N+ S+ ++I GY ++
Sbjct: 233 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSD 292
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ A+ +F + ++G V+L A AC+ ++ G Q+H +K + + V N
Sbjct: 293 KGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVAN 352
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
++ +Y CG+L A F + ++ +SW +I A +NG + L F ML G++P
Sbjct: 353 AILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEP 412
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+EFT S+ C +L G ++H+ IK + V +++ +Y KCG++++A+KL
Sbjct: 413 DEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLH 472
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
D ++ +V+WNA+I+G S EA FSK+ G+ PD +T+++I
Sbjct: 473 DRLAEQTVVSWNAIISG-----------FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 521
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L C+ LV +E G+QIHA +K SD + + LV+MY KCG ++ +F + R
Sbjct: 522 LDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDF 581
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
++W +M+ G+A H L +AL++FE M L V+PN TF+ L AC + G+V + L YF
Sbjct: 582 VTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHS 641
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M Y + P ++HY C++D+ R G + +A + I+ M FE + VIW ++ C+ HGN+E
Sbjct: 642 MLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVE 701
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
+ AA +L+L+P+D +Y +L +I+ +AG W +V ++ + R L + SWI IK
Sbjct: 702 VAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIK 761
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE 681
+V++F D HP+S EI++ LD L ++ K GY F L D+E
Sbjct: 762 SEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 171/624 (27%), Positives = 277/624 (44%), Gaps = 102/624 (16%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P ++L S K +T S++ QEC +RK+L + HA ++ T FV
Sbjct: 23 PFKTLPISPFSSYQATPTKKKTFSHI--FQECSDRKALCPGKQAHARMILTEFKPTVFVT 80
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF--------- 163
L+ +Y KC ++ A KVFD +P+ + VSW +++ GY +A +F
Sbjct: 81 NCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCG 140
Query: 164 ------LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
M G T L +CSSLE G QIH VK + D G++L
Sbjct: 141 VVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALL 200
Query: 218 SLYSTC----GSLNSAIKAFNRIREKNV-------------------------------- 241
+Y+ C L ++ F +++ V
Sbjct: 201 DMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCN 260
Query: 242 ------------------MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
S+ +I + + ++ L F + G+ +E +L+
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX 320
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
C + G QVH L +K SN+ V N+I+ +Y KCG + EA +F+ M + V
Sbjct: 321 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAV 380
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
+WNA+IA H Q NG E LS+F + SGM+PD +T+ S+L C+
Sbjct: 381 SWNAIIAAHEQ------------NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 428
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
AL G +IH +K+ D VG AL++MY KCG +E+A ++ ++ +T++SW ++I+
Sbjct: 429 ALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIIS 488
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEY 519
GF+ S +A + F ML GV P+ T+ L C+N +V LG + ++++KE
Sbjct: 489 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCAN--LVTVELGKQIHAQIIKKEL 546
Query: 520 KIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNE--VIWSVFIAGCRRHGNME- 574
+ D Y+ L+DM+ + G ++ DF + PN V W+ + G +HG E
Sbjct: 547 Q----SDAYISSTLVDMYSKCGNMQ---DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 599
Query: 575 -LGFYAAEQLLKLKPKDCESYAML 597
L + QL +KP A+L
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVL 623
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 6/305 (1%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NGN E SL + +L G + +Y S+L+ C ++L+ IH I+K+
Sbjct: 392 NGNEEKTLSL----FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGL 447
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV L+++Y KCG ME+A+K+ D L VVSW ++ISG+ Q E A F ML
Sbjct: 448 DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKML 507
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
E G P N T T L C++L ++ LGKQIHA ++K + + D + ++L +YS CG++
Sbjct: 508 EMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQ 567
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
F + ++ ++W ++ ++G + L+ F M E ++PN T ++ CG
Sbjct: 568 DFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACG 627
Query: 288 TMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTW 345
M + G HS+ G L + ++ + + G V +A +L +GM + V W
Sbjct: 628 HMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIW 687
Query: 346 NAMIA 350
+++
Sbjct: 688 RTLLS 692
>gi|356495756|ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71420-like [Glycine max]
Length = 782
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 229/755 (30%), Positives = 379/755 (50%), Gaps = 59/755 (7%)
Query: 42 SKLIQLNGNSEP----------VRSLGFQ----EALSVLTEGPKVQTSSYVSLLQECVNR 87
S+ ++N ++EP +R+L Q EALS+L + +Y SL C +
Sbjct: 44 SRARKVNSSAEPETIATNIDAQIRALSTQGNIEEALSLLYTHSSLSLQTYASLFHACAQK 103
Query: 88 KSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
K L + +H +++ D F+ ++N+Y KCG++ A+ VFD + N+VSWT+
Sbjct: 104 KCLQHGMTLHHYVLHKDPTIQNDVFLTNHIINMYCKCGHLAYARYVFDQMSHRNIVSWTA 163
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
LISG+ Q+ +F +L A P + L+AC I+ G Q+HA +K
Sbjct: 164 LISGHAQSGLVRECFSLFSGLL-AHFRPNEFAFASLLSACEE-HDIKCGMQVHAVALKIS 221
Query: 206 TEDDTSVGNSLCSLYSTCGSL--------NSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
+ + V NSL ++YS + A F + +N++SW ++I G
Sbjct: 222 LDANVYVANSLITMYSKRSGFGGGYAQTPDDAWTMFKSMEFRNLVSWNSMIAXFQLRGLG 281
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSV---CGTM----LSLRVGAQVHSLGIKLGYASN 310
+ + F+ M GI + TL S+ S CG LR Q+H L IK G S
Sbjct: 282 DKAICLFAHMYCNGIGFDRATLLSVFSSLNECGAFDVINTYLRKCFQLHCLTIKSGLISE 341
Query: 311 LRVRNSIMYLYLKCG-LVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V +++ Y G + + ++F D S +++V+W A+I+ + A
Sbjct: 342 IEVVTALIKSYANLGGHISDCYRIFHDTSSQLDIVSWTALIS------------VFAERD 389
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+A +F +L+ PD YTFS L C+ V + IH+ +K GF D V+ A
Sbjct: 390 PEQAFLLFCQLHRQSYLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNA 449
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++ Y +CG + + +VF EM L+SW SM+ +A H + AL+LF+ M V P+
Sbjct: 450 LMHAYARCGSLALSEQVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQM---NVCPD 506
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
TFV L+ACS+ G+V E + F M ++ + P +DHY C++D++ R G I EA + I
Sbjct: 507 SATFVALLSACSHVGLVDEGVKLFNSMSDDHGVVPQLDHYSCMVDLYGRAGKIFEAEELI 566
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+KM +P+ VIWS + CR+HG L AA++ +L+P + Y + +I+ S G +
Sbjct: 567 RKMPMKPDSVIWSSLLGSCRKHGETRLAKLAADKFKELEPNNSLGYVQMSNIYSSGGSFT 626
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+++N + K+ + SW+ I +V+ F HP I L+ ++ + K G
Sbjct: 627 KAGLIRNEMSDFKVRKEPGLSWVEIGKQVHEFGSGGQYHPNRGAILSRLEIVIGQLKEMG 686
Query: 669 YKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIV----SPILVVKSTTMCRDCH 719
Y + S L D +E +HSEK+A+ F ++N + + I ++K+ +C DCH
Sbjct: 687 YVPELSLALYDTEVEHKEDQLFHHSEKMALVFAIMNEGSLPCGGNVIKIMKNIRICVDCH 746
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
NF+K+ + L +EI+VRDS R H+F C+C D+
Sbjct: 747 NFMKLASYLFQKEIVVRDSNRFHRFKYATCSCNDY 781
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/643 (32%), Positives = 345/643 (53%), Gaps = 19/643 (2%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
S+G E + L G + + ++ +L+ + + +H +++K G V+ L
Sbjct: 142 SVGLFEKMQEL--GIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSL 199
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ Y KCG +E A+ +FD L +VVSW S+ISG N + F+ ML G +
Sbjct: 200 IAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDS 259
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
TL L AC+++ ++ LG+ +HAY VK N+L +YS CG+LN A + F +
Sbjct: 260 ATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVK 319
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+ E ++SWT++I A G + + F +M S+G++P+ + +TS+ C SL G
Sbjct: 320 MGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKG 379
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+VH+ K SNL V N++M +Y KCG ++EA +F + N+V+WN MI G++Q
Sbjct: 380 REVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQ- 438
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
++ EAL +F + +KPD T + +L C+ L ALE+G +IH L
Sbjct: 439 ----------NSLPNEALQLFLDMQKQ-LKPDDVTMACVLPACAGLAALEKGREIHGHIL 487
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ G+ SD+ V ALV+MY KCG + A ++F + + +I WT MI G+ H +A+
Sbjct: 488 RKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAIS 547
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
FE M +AG+ P + +F L AC+++G++ E F+ M+ E I+P ++HY C++D+
Sbjct: 548 TFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLL 607
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
+R G + A+ FI+ M +P+ IW ++GCR H ++EL AE + +L+P++ Y
Sbjct: 608 IRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYV 667
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+L +++ A +WE+V ++ + L SWI ++ K F D HPQ+ I
Sbjct: 668 LLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDS 727
Query: 656 VLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAI 693
+L +L K GY + + L + +E HSEKLA+
Sbjct: 728 LLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKLAM 770
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 282/522 (54%), Gaps = 30/522 (5%)
Query: 59 FQEALSVLTEGPK--VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
+ A+ +L+ + ++ ++Y S+LQ C KSL + + +H+ I G D + LV
Sbjct: 40 LRNAMKLLSRSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLV 99
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
+Y CG++ + +++FD + + W L+S Y + ++ +F M E G +
Sbjct: 100 FMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSY 159
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L ++ +R K++H YV+K +V NSL + Y CG + SA F+ +
Sbjct: 160 TFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDEL 219
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+++V+SW ++I C NG + GL FF +ML+ G+ + TL ++ C + +L +G
Sbjct: 220 SDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGR 279
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H+ G+K G++ + N+++ +Y KCG ++ A ++F M +V+W ++IA H
Sbjct: 280 ALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAH---- 335
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
++ L EA+ +F ++ S G++PD+Y +S++ C+ +L++G ++H K
Sbjct: 336 --VREGLH-----YEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKK 388
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
S++ V AL+NMY KCG +E A+ +F ++ + ++SW +MI G++ +SL ++ALQL
Sbjct: 389 NNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQL 448
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMC-LI 532
F DM ++P+ VT L AC AG+ G + +++K Y H C L+
Sbjct: 449 FLDM-QKQLKPDDVTMACVLPAC--AGLAALEKGREIHGHILRKGYFSDL---HVACALV 502
Query: 533 DMFVRLGCI---EEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
DM+V+ G + ++ FD I K D ++W+V IAG HG
Sbjct: 503 DMYVKCGLLVLAQQLFDMIPKKDM----ILWTVMIAGYGMHG 540
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 357/647 (55%), Gaps = 18/647 (2%)
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+ +Y K ++++A +VF + +VVSW+S+I+G+ N + A++ F ML
Sbjct: 436 VANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GH 494
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P +VT AL+AC++ ++R GK+IHAYV++ + V N+L LY CG + A
Sbjct: 495 VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAW 554
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F+ EK+V+SW ++ +G L F++M+ + S + C +
Sbjct: 555 AQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLG 612
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
L VG ++H L G+ + V N+++ +Y K +D+A ++F M+ ++V+W++MIA
Sbjct: 613 RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIA 672
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G ++ +AL F + +KP+ TF + L+ C+ AL G++I
Sbjct: 673 G-----------FCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEI 720
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA L+ G S+ V AL+++Y KCG+ A F S + ++SW M++GF H L
Sbjct: 721 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 780
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
AL LF M+ G P++VTFV + ACS AGMV + F +++ I P + HY C
Sbjct: 781 DIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYAC 839
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R+G + EA++ I +M +P+ +W + GCR H ++ELG AA+ +L+L+P D
Sbjct: 840 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPND 899
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+ +L D++ AG+W VA V+ RE+ L + + SW+ +K ++F +D HPQ
Sbjct: 900 VAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQI 959
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD--EESASVYHSEKLAIAFGLLNTPIVSPILV 708
EI VL + E+ K G+ ES E + E+ HSE+LA+AFGL+NT + I V
Sbjct: 960 KEINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGHSERLAVAFGLINTTPGTTISV 1019
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDFG 755
K+ C+ CH K I+ + REI VRD+K+LH F +G C+C D G
Sbjct: 1020 TKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDCSCGDIG 1066
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 159/547 (29%), Positives = 277/547 (50%), Gaps = 22/547 (4%)
Query: 57 LGF-QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
+GF +EAL + L G + ++ +L+ C +HAH+++ G + V
Sbjct: 175 VGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDV 234
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+ LV +Y KCG++ A+KVFD + + +SW ++I+G+ +N + E + +FL MLE
Sbjct: 235 LNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEV 294
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P +T+ + A L + K++H + VK D + NSL +Y++ G + A K
Sbjct: 295 QPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGK 354
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+R+ K+ MSWT +I +NG + L ++ M + P++ T+ S + C +
Sbjct: 355 IFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGR 414
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L VG ++H L G+ + V N+++ +Y K +D+A ++F M+ ++V+W++MIAG
Sbjct: 415 LDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAG 474
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
++ +AL F + +KP+ TF + L+ C+ AL G++IH
Sbjct: 475 -----------FCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIH 522
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A L+ G S+ V AL+++Y KCG+ A F S + ++SW M++GF H L
Sbjct: 523 AYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGD 582
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
AL LF M+ + ++ ALAAC+ G + + E+ Q + I+ V+ L
Sbjct: 583 IALSLFNQMMYTSL--GRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVV-ANAL 639
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG-CRRHGNMELGFYAAEQLLKLKPKD 590
++M+ + I++A + K M E + V WS IAG C H + + +Y L +KP
Sbjct: 640 LEMYAKSKHIDKAIEVFKFMA-EKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNS 698
Query: 591 CESYAML 597
A L
Sbjct: 699 VTFIAAL 705
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 266/530 (50%), Gaps = 25/530 (4%)
Query: 61 EALSVLTEGPKV-QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVN 117
+AL +L P+ +YV+L + C R+++ + A H F + +++
Sbjct: 82 QALWLLESSPEPPDEGAYVALFRLCEWRRAVDAG--MRACARADAEHPSFGLRLGNAMLS 139
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+ + G + A +VF +P +V SW ++ GY + E A+ ++ ML AG P T
Sbjct: 140 MLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYT 199
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L C + R+G+++HA+V+++ D+ V N+L ++Y+ CG + +A K F+ +
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ +SW +I EN E GL F ML +QPN T+TS++ G + + +
Sbjct: 260 MTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKE 319
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H +K G+A ++ NS++ +Y G + +A K+F M + ++W AMI+G+ +
Sbjct: 320 MHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEK--- 376
Query: 358 LAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
NG +AL +++ + + PD T +S L C+ L L+ G ++H L
Sbjct: 377 ---------NGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQN 427
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF+ VVV AL+ MY K I++A VF M+ + ++SW+SMI GF + S AL
Sbjct: 428 KGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYY 487
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDM 534
F M L V+PN VTF+ AL+AC+ G + E+ + + Y+ L+D+
Sbjct: 488 FRYM-LGHVKPNSVTFIAALSACAATGALRSGK---EIHAYVLRCGIGSEGYVPNALLDL 543
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+V+ G A+ + E + V W++ ++G HG ++ Q++
Sbjct: 544 YVKCGQTSYAWAQF-SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + ++++ L C +L + + IHA++++ G + +V L+++Y KCG A
Sbjct: 695 KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWA 754
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
F +VVSW ++SG+V + ++A+ +F M+E G +P VT + ACS
Sbjct: 755 QFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF-VLMCACSRAGM 813
Query: 191 IRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVI 248
+ G ++ H K+ + + L S G L A NR+ K + W ++
Sbjct: 814 VIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALL 873
Query: 249 GAC 251
C
Sbjct: 874 NGC 876
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/674 (32%), Positives = 352/674 (52%), Gaps = 19/674 (2%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
K+L++ ++A I+ H+ + Y + G++ A K F+++ N+ SW +++
Sbjct: 26 KTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTIL 85
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
+ + +N + +F ML+ G + L A+ AC L + K H+ +K + E
Sbjct: 86 ASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLE 145
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D V +L ++Y+ GSL A K F + KN + W +I E FS+M
Sbjct: 146 GDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRM 205
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA-SNLRVRNSIMYLYLKCGL 326
G + + F + + CG + + + G H L IK + SN ++ S++ +Y+KCG
Sbjct: 206 RRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGF 265
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMK 385
+D A KLF+ +S+ ++V W+A+IAG A+ NG E++S+F ++ + +
Sbjct: 266 LDFALKLFEEISYRDVVVWSAIIAGFAR------------NGRALESISMFRQMLADSVT 313
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P+ TF+SI+ CS L +L+QG +H ++ G DV T+ ++MY KCG I A RV
Sbjct: 314 PNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRV 373
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F ++ + + SW++MI GF H L +AL LF +M PN VTFV L+ACS++G +
Sbjct: 374 FCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI 433
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
E +F+ M ++Y I PV +HY C++D+ R G I+EA FI M EP W +
Sbjct: 434 EEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLG 493
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
CR H EL A++LL L+ Y ML +I+ G WE V + E+ + +
Sbjct: 494 ACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKI 553
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----E 680
++ I I++K+Y F D ++ +I + + L E+ + GY F L D +
Sbjct: 554 VGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYVPDLRFVLHDVDDEVK 613
Query: 681 ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
+ HSEKLAI FGLLN+ PI + K+ +C DCH K I+ +T R+II+RD KR
Sbjct: 614 QEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFISLITRRKIIMRDVKR 673
Query: 741 LHKFVNGHCTCRDF 754
H +G C+C D+
Sbjct: 674 FHHVQDGVCSCGDY 687
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 213/456 (46%), Gaps = 22/456 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L EG V + + V ++ C A++ H+ +K D +V L+NVY + G+
Sbjct: 104 MLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGS 163
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+EEA KVF+ +P N V W +I G++ S+ +F M +G + + A
Sbjct: 164 LEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQA 223
Query: 185 CSSLESIRLGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C ++ + + GK H +K D + + SL +Y CG L+ A+K F I ++V+
Sbjct: 224 CGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVV 283
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W+ +I NG A++ + F +ML++ + PN T SI C ++ SL+ G VH I
Sbjct: 284 WSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMI 343
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ G +++ S + +Y KCG + A ++F + N+ +W+ MI G
Sbjct: 344 RNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMING-----------F 392
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSD 422
H EAL++F ++ S P+ TF S+L+ CS +E+G +++ G
Sbjct: 393 GMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPV 452
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDML 481
+V++ + G+I+ A M T S W +++ H + A ++ + +L
Sbjct: 453 EEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLL 512
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
P + G SN +Y +G +EM++K
Sbjct: 513 -----PLESDQSGVYVMLSN---IYADVGMWEMVKK 540
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/704 (30%), Positives = 372/704 (52%), Gaps = 31/704 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + ++++ L C + +SL + IH +V + D V L+N+Y KCG++
Sbjct: 52 DGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSH 111
Query: 128 AQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++VF + R NV+SW+ + + + A+ F ML G T + T L+ACS
Sbjct: 112 AKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACS 171
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSW 244
S ++ G+ IH+ + E + V N++ ++Y CG++ A K F+ + E ++V+SW
Sbjct: 172 SPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSW 231
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++ N ++ + +M ++P++ T S+ S C + + +G +H +
Sbjct: 232 NIMLSTYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVN 288
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
N+ V N+++ +Y KCG EA+ +FD M ++++W +I+ + + +A
Sbjct: 289 DELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVA----- 343
Query: 365 AHNGGTEALSIFSKL-------NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
EA +F ++ +S +KPD F +IL C+ + ALEQG+ +
Sbjct: 344 ------EACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASC 397
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQL 476
G SD VGTA+VN+Y KCG IE A R+F + +R + W +MI +A SH+AL+L
Sbjct: 398 GLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKL 457
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK-IKPVMDHYMCLIDMF 535
F M + GVRP+ +FV L ACS+ G+ + YF M EY+ + + H+ C+ D+
Sbjct: 458 FWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLL 517
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G ++EA +F++K+ +P+ V W+ +A CR H +++ A +LL+L+P+ Y
Sbjct: 518 GRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 577
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
L +I+ +W VA V+ E+ + + S I I ++ F D HP++ EI +
Sbjct: 578 ALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIRE 637
Query: 656 VLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
L +L + K GY L ++E HSE+LAIA GL++TP+ +P+ V K
Sbjct: 638 ELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTK 697
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH K+I+ + R+I+VRD R H F +G C+C+D+
Sbjct: 698 NLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDY 741
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 139/461 (30%), Positives = 239/461 (51%), Gaps = 31/461 (6%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y C + +A+ FD L + N+ SWT L++ + + Q + + M + G P VT
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI- 236
TAL +C ES+R G +IH VV + E D V N+L ++Y CGSL+ A + F ++
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
R +NV+SW+ + GA +G + LR F ML GI+ + + +I S C + ++ G
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQ 354
+HS G+ S L V N++M +Y +CG V+EA+K+FD M ++V+WN M++ +
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ G +A+ ++ ++ ++PD T+ S+L+ CS + G +H
Sbjct: 241 -----------NDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQI 286
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ +V+VG ALV+MY KCG A VF +M R++ISWT++I+ + L +A
Sbjct: 287 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEAC 346
Query: 475 QLFEDML-------LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
LF+ ML V+P+ + FV L AC++ AL +M+ ++ +
Sbjct: 347 HLFQQMLELEKNGSSQRVKPDALAFVTILNACADVS----ALEQGKMVSEQAASCGLSSD 402
Query: 528 Y---MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
+++++ + G IEEA + P+ +W+ IA
Sbjct: 403 KAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/449 (28%), Positives = 231/449 (51%), Gaps = 33/449 (7%)
Query: 47 LNGNS-EPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
L+GN E +R F +L G K S+ V++L C + + + +IH+ I +G
Sbjct: 137 LHGNVWEALRHFRF-----MLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGF 191
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVF 163
+ V ++ +YG+CG +EEA+KVFD + +VVSW ++S YV N + + AI ++
Sbjct: 192 ESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLY 251
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
M P VT + L+ACSS E + LG+ +H +V + E + VGN+L S+Y+ C
Sbjct: 252 QRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC 308
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML-------SEGIQPNE 276
GS A F+++ +++++SWTT+I A + F +ML S+ ++P+
Sbjct: 309 GSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDA 368
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+I + C + +L G V G +S+ V +++ LY KCG ++EA+++FD
Sbjct: 369 LAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDA 428
Query: 337 M-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
+ S ++ WNAMIA +AQ EAL +F ++ G++PD ++F SIL
Sbjct: 429 VCSRPDVQLWNAMIAVYAQF-----------GQSHEALKLFWRMEMEGVRPDSFSFVSIL 477
Query: 396 TICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALV-NMYKKCGRIERASRVFVEMSTRT 453
CS +QG+ ++T + ++ + V ++ + GR++ A ++ +
Sbjct: 478 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 537
Query: 454 -LISWTSMITGFANHSLSHQALQLFEDML 481
++WTS++ NH +A ++ +L
Sbjct: 538 DAVAWTSLLAACRNHRDLKRAKEVANKLL 566
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/713 (31%), Positives = 370/713 (51%), Gaps = 24/713 (3%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
G E + F+ ++ +G + +Y SLL C +R L + +H+ I TG D
Sbjct: 377 GYGEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTD 436
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V T L+++Y KCG+ EEA+KVF+ +P NV+SW + IS ++ + A F M
Sbjct: 437 LTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRR 496
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P ++T T L +C+S E + G+ IH + ++ + V N+L S+Y CG+L
Sbjct: 497 DDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLAD 556
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F RIR +++ SW +I A ++G F K SEG + +++T ++
Sbjct: 557 AREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVAN 616
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ L G +H L K G+ ++RV +++ +Y KCG + +A+ +F + ++V WNAM
Sbjct: 617 LEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAM 676
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+A +A + G +AL +F ++ G+ PD T+S+ L C+RL A+E G+
Sbjct: 677 LAAYAH-----------SDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGK 725
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+IHA + G +D V +L+ MY +CG + A +VF +M +R + SW ++I G+ +
Sbjct: 726 KIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNG 785
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ AL+ +E ML A + PN+ TF L++ + G +A + E ++KE+ ++P HY
Sbjct: 786 QGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHY 845
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK- 587
++ R G ++EA +FI+++ E ++W + CR H N+EL A E LL K
Sbjct: 846 AYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAKA 905
Query: 588 ---PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
P CE L+ I+ +AGRWEDV+V+K +E L + I + + ++F N
Sbjct: 906 QASPAVCEQ---LMSIYAAAGRWEDVSVLKTTMQEAGLVALKSCT-IEVNSEFHNFIANH 961
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYK---QQESFELTDEESASVYHSEKLAIAFGLLNTP 701
L PQ K+ +ELV K G+ Q S + ++E E LA+A+GL +T
Sbjct: 962 -LSPQIGVQCKI-EELVRKMTDRGFSLDPQYASNDSREKECLFFQCPELLAVAYGLEHTA 1019
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V + + H +K I+ R I+VRD H F +G C+C D+
Sbjct: 1020 SGVSIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFEDGICSCGDY 1072
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/507 (32%), Positives = 273/507 (53%), Gaps = 22/507 (4%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + Y LQ+CV KSL+ + +H H+ D ++ L+++Y KCG++E+A
Sbjct: 95 GVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDA 154
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + +VVSW ++ISGY + + + A +F M G P T + L+AC S
Sbjct: 155 NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSP 214
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ G+QIH+ + K E D +V +L ++Y CGSL A K FN +RE+NV+SWT +I
Sbjct: 215 IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMI 274
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
++G++ + L F K++ GIQPN+ + SI C L G ++H+ + G
Sbjct: 275 SGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLE 334
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ-MMDLAKDDLSAHN 367
+ V N+++ +Y +CG + A+++FD + +N TWNAMIAG+ + +M+
Sbjct: 335 QEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLME---------- 384
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA +F + G +PD +T++S+L IC+ L++G+++H+ TG+ +D+ V T
Sbjct: 385 ---EAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVAT 441
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG E A +VF +M R +ISW + I+ H L +A Q F+ M V P
Sbjct: 442 ALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNP 501
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA--- 544
+ +TF+ L +C++ + E Y ++ + LI M+ R G + +A
Sbjct: 502 DHITFITLLNSCTSPEDL-ERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREV 560
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F I++ D W+ IA +HG
Sbjct: 561 FYRIRRRDLGS----WNAMIAANVQHG 583
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 173/560 (30%), Positives = 283/560 (50%), Gaps = 31/560 (5%)
Query: 47 LNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
L+G + L +Q + EG K ++++S+L C + +L E IH+ I K G
Sbjct: 178 LHGRDQEAADLFYQ----MQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYE 233
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
D V T L+N+Y KCG++E A+KVF+ + NVVSWT++ISGYVQ+ A+ +F +
Sbjct: 234 SDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKL 293
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
+ +G P V+ + L AC++ + G ++HAY+ + E + VGN+L S+YS CGSL
Sbjct: 294 IRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSL 353
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+A + F+ +R N +W +I GE G + R F M +G QP++FT S+ ++C
Sbjct: 354 ANARQVFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAIC 412
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
L G ++HS G+ ++L V +++ +Y KCG +EA+K+F+ M N+++WN
Sbjct: 413 ADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWN 472
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
A I+ + H+ G EA F ++ + PD TF ++L C+ LE+
Sbjct: 473 AFISCCCR-----------HDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLER 521
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G IH + G LS+ V AL++MY +CG + A VF + R L SW +MI
Sbjct: 522 GRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQ 581
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKI 521
H + A LF G + ++ TF+ L A +N AG + L K+ ++
Sbjct: 582 HGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRV 641
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR--HGNMELGFYA 579
LI M+ + G + +A + + E + V W+ +A G L +
Sbjct: 642 ------LTTLIKMYSKCGSLRDAENVFSTVQ-EKDVVCWNAMLAAYAHSDRGQDALKLFQ 694
Query: 580 AEQLLKLKPKDCESYAMLLD 599
QL + P D +Y+ L+
Sbjct: 695 QMQLEGVNP-DSSTYSTALN 713
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 8/197 (4%)
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
L G++ +L ++ L C +L +G+++H F D+ + L++MY KCG
Sbjct: 91 LGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGS 150
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A+ VF M + ++SW +MI+G+A H +A LF M G++PNQ TF+ L+A
Sbjct: 151 IEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSA 210
Query: 499 CSNAGMVYEALGYFEMMQKEYK---IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
C + AL + E + + ++ LI+M+ + G +E A +M E
Sbjct: 211 CQSP----IALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMR-ER 265
Query: 556 NEVIWSVFIAGCRRHGN 572
N V W+ I+G +HG+
Sbjct: 266 NVVSWTAMISGYVQHGD 282
>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
Length = 1100
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 321/589 (54%), Gaps = 19/589 (3%)
Query: 173 PTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P+++T+ AL + S L +R G+Q+HA +K + + V SL SLY+ CG L+ A +
Sbjct: 523 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 582
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + + + WT +I A + G+ + + + G++P+ FT + + C +
Sbjct: 583 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 642
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G V + G A ++ V + + LY+KCG + +A+++FD M H + V W AM+ G
Sbjct: 643 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 702
Query: 352 HAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+A NG EAL +F + + GMKPD Y + L+ C+RL AL+ G Q
Sbjct: 703 YAS------------NGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA 750
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ FL + V+GTAL++MY KCG A VF +M + +I W +MI G
Sbjct: 751 IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHE 810
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
A L M +GV+ N TF+G L +C++ G++ + YF M K Y I P ++HY C
Sbjct: 811 KIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 870
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA + M N VI + GC+ H N EL + +QL+ L+P +
Sbjct: 871 MVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWN 930
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y ML +I+ + GRWED A ++ + + + + SW+ + KV+ F+ D HP S
Sbjct: 931 SGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 990
Query: 651 AEIFKVLDELVEKAKCFGYKQQES---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSP 705
+I+K LDEL + K GY+ F++ DEE V+HSEKLAIAF LL T
Sbjct: 991 DQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGET 1050
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH IK+++ +T REIIVRD+ R H F +G C+C D+
Sbjct: 1051 IRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDY 1099
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 171/363 (47%), Gaps = 12/363 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L E +HA +K SH + V+T L+++Y KCG + AQ+VFD +P + V WT+LI+
Sbjct: 541 PLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALIT 600
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y+ A+HV + G P + T LTAC+ + + G+ + +
Sbjct: 601 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQ 660
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V + LY CG + A + F+++R K+ ++W ++G NG + L F M
Sbjct: 661 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 720
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+EG++P+ + + S C + +L +G Q + + N + +++ +Y KCG
Sbjct: 721 AEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 780
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
EA +F M +++ WNAMI G ++ H A ++ ++ SG+K +
Sbjct: 781 EAWVVFQQMRKKDIIVWNAMILGLG---------MTGHE--KIAFALVGQMEKSGVKLND 829
Query: 389 YTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
TF +L C+ ++ G + H +T + +V++ + G ++ A ++
Sbjct: 830 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 889
Query: 448 EMS 450
+M
Sbjct: 890 DMP 892
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A + G + + + V +L C L+ E + + G Q FV T V++Y K
Sbjct: 615 ARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVK 674
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG M +A++VFD + + V+W +++ GY N P A+ +FL M G P + A
Sbjct: 675 CGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGA 734
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+ L ++ LG+Q V + D+ +G +L +Y+ CGS A F ++R+K++
Sbjct: 735 LSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDI 794
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W +I G G +M G++ N+ T + C ++ G +
Sbjct: 795 IVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 854
Query: 302 GIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
KL Y + R+ + ++ L + GL+ EA +L D M N V A++ G
Sbjct: 855 MTKL-YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGG 906
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 317/560 (56%), Gaps = 29/560 (5%)
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
Y++ G L+ ++ F R + +V WT +I G Q L F+++ML++G++PN FT
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
+SI +C + G +HS +KLG+ S+L VR ++ +Y + G V AQ+LFD M
Sbjct: 79 SSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 340 VNLVTWNAMIAGHAQM--MDLAK---DDLSAHNG---------------GTEALSIFSKL 379
+LV+ AM+ +A+ +D A+ D + +G EAL +F ++
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ KP+ T S+L+ C +L ALE G +H+ G +V VGTALV+MY KCG +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E A VF ++ + +++W SMI G+A S +ALQLF+ M G+ P +TF+G L+AC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
++G V E F M+ EY I+P ++HY C++++ R G +E+A++ +K M+ EP+ V+
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + CR HG + LG E L+ + +Y +L +I+ + G W+ VA ++ + ++
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-- 677
+ + S I + +KV+ F HP+ EI+ +L+E+ K GY Q L
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD 494
Query: 678 ---TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
T++E + HSEKLAIAFGL+NT + I +VK+ +C DCH K+I+ +T R+I+
Sbjct: 495 IGETEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIV 554
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
VRD R H FVNG C+C D+
Sbjct: 555 VRDRNRFHHFVNGSCSCGDY 574
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 150/319 (47%), Gaps = 37/319 (11%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+LT+G + ++ S+L+ C + + +H+ VK G D +V T L++VY + G+
Sbjct: 66 MLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGD 121
Query: 125 MEEAQKVFDNLPRINVVS-------------------------------WTSLISGYVQN 153
+ AQ++FD +P ++VS W +I GY QN
Sbjct: 122 VVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQN 181
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
P A+ +F ML+A P VT+ + L+AC L ++ G+ +H+Y+ + + VG
Sbjct: 182 GMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVG 241
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+L +YS CGSL A F++I +K+V++W ++I G + + L+ F M G+
Sbjct: 242 TALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLH 301
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P T I S CG + G + + + + G + ++ L + G V++A +
Sbjct: 302 PTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYE 361
Query: 333 LFDGMS-HVNLVTWNAMIA 350
L M+ + V W ++
Sbjct: 362 LVKNMNIEPDPVLWGTLLG 380
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 190/443 (42%), Gaps = 62/443 (13%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y G ++ + +F +V WT++I G+ E A++ + ML G P T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L C I GK +H+ VK + D V L +Y+ G + SA + F+ + E
Sbjct: 79 SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 239 KNVMS-------------------------------WTTVIGACGENGEAVQGLRFFSKM 267
K+++S W +I +NG + L F +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
L +PNE T+ S+ S CG + +L G VHS G N+ V +++ +Y KCG +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
++A+ +FD + ++V WN+MI G+A M ++ EAL +F + G+ P
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYA-MXGFSQ----------EALQLFKSMCRMGLHPT 303
Query: 388 LYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
TF IL+ C + +G I + + + G + +VN+ + G +E+A +
Sbjct: 304 NITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELV 363
Query: 447 VEMSTRT-LISWTSMITGFANH---SLSHQALQLFEDMLLAGVRPNQVTFV---GALAAC 499
M+ + W +++ H +L + ++L D LA N T++ AA
Sbjct: 364 KNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA----NSGTYILLSNIYAAV 419
Query: 500 SNAGMVYEALGYFEMMQKEYKIK 522
N ++ + M K+ +K
Sbjct: 420 GN----WDGVARLRTMMKDSGVK 438
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 2/210 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L K + +S+L C +L + +H++I G + V T LV++Y KCG+
Sbjct: 194 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 253
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A+ VFD + +VV+W S+I GY + A+ +F M G +PTN+T L+A
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSA 313
Query: 185 CSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVM 242
C + G I + +Y E + +L G + A + + E + +
Sbjct: 314 CGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPV 373
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
W T++GAC +G+ G + ++ + +
Sbjct: 374 LWGTLLGACRLHGKIALGEKIVELLVDQNL 403
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/706 (32%), Positives = 370/706 (52%), Gaps = 56/706 (7%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSN----AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+G + + LL+ C S+ AEI +V TG D V T L++ +CG
Sbjct: 4 DGCRPNAVIFTRLLEACARSPEKSDRSRLAEI-QFRVVATGFDADVTVATALISALARCG 62
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++E A++ FD +P NVVSW S+I+ ++ A+ ++ M G P++++ AL
Sbjct: 63 DLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALC 122
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+CS L + GK IH V + VGN+L ++YS C L+ A +AF RI K+V+S
Sbjct: 123 SCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVS 182
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL- 301
W ++I A + G + + L + +M+ E ++P + TL G LSLR L
Sbjct: 183 WNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVH---ALGAALSLRSAGDTKLLQ 239
Query: 302 --GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
I+LG +L V ++++ KCG +D+A+ +FD M N+V+W+ +IA
Sbjct: 240 EDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAA-------- 291
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
L+ H G +A+ +F +++ G++P+ T S+L C+ A+ +G + HA GF
Sbjct: 292 ---LAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGF 348
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
++ V ALVNMY KCG + A VF M+ R ++SWT+M+ G+A+H + +A ++F+
Sbjct: 349 EAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKA 408
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M L G++PN +TFV L CS+AG+V + L F +M ++ I PV +HY C+ID+ R G
Sbjct: 409 MALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAG 468
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK-PKDCESYAMLL 598
+EEA + ++ M EP++ W+ + C+ H + + A+ L P Y +L
Sbjct: 469 WLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLS 528
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDD---WSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
+++ T EE+ S+ ++ S I +K +V+ F D HP+ EI
Sbjct: 529 NMY---------------TDEEQQSDPEEDQCSSLIEVKGRVHEFVAGDWSHPRIEEIVA 573
Query: 656 VLDELVEK-------AKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILV 708
L L E+ + C Q+ S + + HS KLAIAFG+L + S I V
Sbjct: 574 ELQRLQEEMMILRGSSLCEEGGQEGSVQENE-------HSLKLAIAFGVLASLQGSSINV 626
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
V + +C +CH+ K+I+ + R+I+VRDS R H G C+C D+
Sbjct: 627 VNTRRICVECHDAAKVISKIAGRKIVVRDSYRFHHIEQGVCSCGDY 672
>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
Length = 719
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/682 (31%), Positives = 350/682 (51%), Gaps = 83/682 (12%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ Y G + EA+K+F P + ++W+SLISGY + A+ +F +M G P
Sbjct: 78 MIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPN 137
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T G+ L CS + GKQIHA+ +K Q + + V L +Y+ C + A F
Sbjct: 138 QFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFE 197
Query: 235 RIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+K N + WT ++ +NG+ + + F M EGI+ N+FT SI + CG++ +
Sbjct: 198 LAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACG 257
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
GAQVH ++ G+ +N+ V ++++ +Y KCG + A+++ + M + V+WN+MI G
Sbjct: 258 FGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCV 317
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ G EALS+F ++ MK D +T+ S+
Sbjct: 318 R-----------QGLGEEALSLFRIMHLRHMKIDEFTYPSL------------------- 347
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
V ALV+MY K G + A VF +M+ + +ISWTS++TG ++ +A
Sbjct: 348 -----------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 396
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSN--------------AGMVYEAL---------- 509
L+LF +M + G+ P+Q+ L+A N A V++++
Sbjct: 397 LRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTA 456
Query: 510 ------------GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
YF+ M++ Y IKP +HY C+ID+ R G + EA + + +M +P+
Sbjct: 457 LIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDA 516
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
+W +A CR HGN+ELG AA L +L+PK+ Y +L +++ +AG+WE+ A + L
Sbjct: 517 TVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLM 576
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
+ +S+ SWI + KV+ F D HP++AEI+ +DE++ K GY +F L
Sbjct: 577 KLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFAL 636
Query: 678 TD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
D +E YHSEKLA+AFGLL P +PI + K+ +C DCH +K ++ + R
Sbjct: 637 HDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRH 696
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
+I+RDS H F G C+C D+
Sbjct: 697 VILRDSNCFHHFREGACSCSDY 718
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 215/497 (43%), Gaps = 88/497 (17%)
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C LE L I +V T +S N + S S CG ++ A K F+ + +++ SW
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSW 75
Query: 245 TTVIGACGENGE-------------------------------AVQGLRFFSKMLSEGIQ 273
T+IGA +G V+ L F +M EG +
Sbjct: 76 NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN+FT S+ VC + L G Q+H+ IK + SN V ++ +Y KC + EA+ L
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195
Query: 334 FD-GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F+ N V W AM+ G++Q D G +A+ F + G++ + +TF
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGD-----------GHKAIECFRDMRGEGIECNQFTFP 244
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
SILT C + A G Q+H +++GF ++V VG+ALV+MY KCG + A R+ M
Sbjct: 245 SILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD 304
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF-------------------- 492
+SW SMI G L +AL LF M L ++ ++ T+
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKRGYFDY 364
Query: 493 ----------------VGALAACSNAGMVYEALGYFEMMQ------KEYKIKPVMDHY-M 529
+ C + G EAL F M+ + I V+
Sbjct: 365 AFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALDN 424
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
L+ M+ + GCIE+A M+ + + + W+ I G ++G F + E++ +KP
Sbjct: 425 SLVSMYAKCGCIEDANKVFDSMEIQ-DVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPG 483
Query: 590 DCESYAMLLDIFVSAGR 606
E YA ++D+ +G+
Sbjct: 484 P-EHYACMIDLLGRSGK 499
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 178/424 (41%), Gaps = 96/424 (22%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++ S+L C + + +H IV++G + FV + LV++Y KCG++
Sbjct: 234 EGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSN 293
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++ + + + VSW S+I G V+ E A+ +F M
Sbjct: 294 ARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIM--------------------H 333
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L +++ + + +V N+L +Y+ G + A F ++ +K+V+SWT++
Sbjct: 334 LRHMKIDEFTYPSLVN----------NALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSL 383
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ C NG + LR F +M GI P++ + ++ S
Sbjct: 384 VTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA---------------------- 421
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ------------- 354
+ NS++ +Y KCG +++A K+FD M +++TW A+I G+AQ
Sbjct: 422 -----LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEE 476
Query: 355 -------------MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
M+DL L EA + LN ++PD + ++L C
Sbjct: 477 VYGIKPGPEHYACMIDL----LGRSGKLMEAKEL---LNQMAVQPDATVWKALLAACRVH 529
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----IS 456
+E GE+ A L + V L N+Y G+ E A++ M R + S
Sbjct: 530 GNVELGERA-ANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCS 588
Query: 457 WTSM 460
W M
Sbjct: 589 WIEM 592
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 42/220 (19%)
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+YTFS +C +L E I G + +++ KCGR++ A ++F
Sbjct: 8 IYTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFD 65
Query: 448 EMSTRTLISWTSMITGFAN-------------------------------HSLSHQALQL 476
M R SW +MI +AN + +AL+L
Sbjct: 66 VMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALEL 125
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH----YMCLI 532
F +M G RPNQ T+ L CS +Y L + + + IK D L+
Sbjct: 126 FWEMQYEGERPNQFTWGSVLRVCS----MYVLLEKGKQIHA-HAIKTQFDSNAFVVTGLV 180
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
DM+ + CI EA + + N V+W+ + G ++G+
Sbjct: 181 DMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGD 220
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF---- 114
F A V + S+ SL+ CV+ S A + + G H D V+
Sbjct: 362 FDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSA 421
Query: 115 ----LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
LV++Y KCG +E+A KVFD++ +V++WT+LI GY QN +
Sbjct: 422 LDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGR 466
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/580 (33%), Positives = 330/580 (56%), Gaps = 19/580 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L C ++ I KQ+HA V D V N L + + L +A FN++ E+
Sbjct: 8 STLFKCRNIFQI---KQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEER 64
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +SW+ +IG +NG+ + + F +++ G +P+ F+L + C + L +G +H
Sbjct: 65 DPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
S +K G + V ++++ +Y KCG++D A++LFD M +LVT MIAG+A+
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAEC---- 180
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
E+ +F ++ G PD +I+ C++L A+ + +H +
Sbjct: 181 -------GKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRY 233
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV +GTA+++MY KCG I+ + +F M + +ISW++MI + H +AL+LF
Sbjct: 234 SLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHM 293
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
ML +G+ PN++TF+ L ACS+AG+V + L F +M Y ++P + HY C++D+ R G
Sbjct: 294 MLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAG 353
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+++A I+ M+ E +E IW F+ CR H ++L AA+ LL L+ ++ Y +L +
Sbjct: 354 RLDQALRLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSN 413
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +AGRW+DVA ++NL + +L + ++WI + + +Y F D H +S EI+++L
Sbjct: 414 IYANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKS 473
Query: 660 LVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L +K + GY + L D +E + HSEKLAIAFGL+ TP +PI + K+ +
Sbjct: 474 LSQKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRV 533
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH+F K+++++T R+IIVRD+ R H F G C+C D+
Sbjct: 534 CGDCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDY 573
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 195/374 (52%), Gaps = 15/374 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
++S L +C N + + +HA + TG D V L+ + K ++ A +F+ +
Sbjct: 6 FISTLFKCRN---IFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ VSW+ +I G+V+N E F +++ AG+ P N +L + AC + +G+
Sbjct: 63 ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRL 122
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH+ V+K D V ++L +Y+ CG +++A + F+R+ +K++++ T +I E G+
Sbjct: 123 IHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK 182
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ F +M +G P++ + +I + C + ++ VH Y+ ++ + +
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG +D ++++FD M N+++W+AMI + H G EAL +F
Sbjct: 243 MIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGY-----------HGQGREALELF 291
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL-TLKTGFLSDVVVGTALVNMYKK 435
+ +SG+ P+ TF S+L CS ++ G Q+ +L ++ G DV T +V++ +
Sbjct: 292 HMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGR 351
Query: 436 CGRIERASRVFVEM 449
GR+++A R+ M
Sbjct: 352 AGRLDQALRLIENM 365
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 158/291 (54%), Gaps = 5/291 (1%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG+ E FQ ++ G K S +++ C + L +IH+ ++K G H
Sbjct: 79 NGDYERC----FQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHL 134
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV + LV++Y KCG ++ A+++FD +P+ ++V+ T +I+GY + +P + +F M
Sbjct: 135 DNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMR 194
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P V + T + AC+ L ++ + +H YV + D +G ++ +Y+ CGS++
Sbjct: 195 RDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSID 254
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
S+ + F+R+ +KNV+SW+ +IGA G +G+ + L F ML+ GI PN T S+ C
Sbjct: 255 SSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACS 314
Query: 288 TMLSLRVGAQVHSL-GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ G Q+ SL + G +++ ++ L + G +D+A +L + M
Sbjct: 315 HAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
M PD F S L C + Q +Q+HA TG + D++V L+ M K + A
Sbjct: 1 MDPDF--FISTLFKCRNIF---QIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAH 55
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA- 502
+F +M R +SW+ MI GF + + Q F +++ AG +P+ + + AC +
Sbjct: 56 LLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTM 115
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPNE 557
G++ L + +++ +D+++C L+DM+ + G I+ A FD + K D
Sbjct: 116 GLIMGRLIHSTVLKNGLH----LDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDL---- 167
Query: 558 VIWSVFIAG 566
V +V IAG
Sbjct: 168 VTRTVMIAG 176
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/723 (30%), Positives = 373/723 (51%), Gaps = 52/723 (7%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+ ALSV + T +Y +++ ++ A + + +D +++ Y
Sbjct: 77 ESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM----PDRDLISWNVMLSGY 132
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
K GN+ A+ +F+ +P +VVSW +++SG+ QN E A +F ML N L
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLS 192
Query: 180 TALTACSSLESIRLGKQ------------IHAYVVKYQTEDDTSV-----------GNSL 216
+ ++ RL + YV K + +D S+ N +
Sbjct: 193 AYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIM 252
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ Y+ G L+ A + F + ++V +WT ++ +NG + R F +M + NE
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNE 308
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+ ++ + G + S ++ + L ++ + N N+++ Y +CG +D+A+ LFD
Sbjct: 309 VSWNAM--IAGYVQSQQI-EKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDE 364
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M + ++W AMI+G+AQ EAL +F K+ G + + L+
Sbjct: 365 MPQRDCISWAAMISGYAQ-----------SGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C+ + ALE G+Q+H +K GF + + G AL+ MY KCG IE A VF +++ + ++S
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS 473
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W +MI G+A H +AL LFE M + ++P+ VT VG L+ACS+ G+V + + YF M
Sbjct: 474 WNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMY 532
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ Y I HY C+ID+ R G ++EA + +K M F P+ W + R HG+ ELG
Sbjct: 533 QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
AAE++ +++P + Y +L +++ ++GRW +V +++ R++ + + +SW+ I++K
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNK 652
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKL 691
+ F D HP++ I+ L+EL + K G+ L D E YHSEKL
Sbjct: 653 THIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKL 712
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A+AFG+L+ P PI V+K+ +C DCHN IK I+ +T R+IIVRDS R H F G C+C
Sbjct: 713 AVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSC 772
Query: 752 RDF 754
D+
Sbjct: 773 GDY 775
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 190/456 (41%), Gaps = 79/456 (17%)
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D N S Y G SA+ FN +R ++ +++ +I N + + F K
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 267 M-----LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL-GYASN---------- 310
M +S + + + S + + V S L G+A N
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF 176
Query: 311 --LRVRNSIMY-----LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL----- 358
+ V+N I + Y++ G +++A++LFD +V+WN ++ G+ + L
Sbjct: 177 DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236
Query: 359 ------AKDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSS---------I 394
+D +S A NG +EA +F +L D++ +++ +
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGM 292
Query: 395 LTICSRLV-ALEQGEQIHALTLKTGFLSDVVVGTA-----------------LVNMYKKC 436
L +R+ + + ++ + G++ + A +V Y +C
Sbjct: 293 LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQC 352
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I++A +F EM R ISW +MI+G+A S +AL LF M G N+ AL
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACAL 412
Query: 497 AACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
++C+ A + + +++ ++ + + L+ M+ + G IEEAFD + + E
Sbjct: 413 SSCAEIAALELGKQLHGRLVKAGFQTGYIAGN--ALLAMYGKCGSIEEAFDVFEDIT-EK 469
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQL-LKLKPKD 590
+ V W+ IAG RHG + E + + +KP D
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDD 505
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 52/292 (17%)
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
SD+V ++ Y + G+ E A VF M R+ +++ +MI+G+ +++ A ++FE M
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 481 ----------LLAGVRPNQ-----------------VTFVGALAACSNAGMVYEALGYFE 513
+L+G N V++ L+ + G V EA F+
Sbjct: 118 PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFD 177
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIAGCRRHGN 572
M + +I + L+ +V+ G IE+A F KMD+E V W+ + G R
Sbjct: 178 QMLVKNEIS-----WNGLLSAYVQNGRIEDARRLFDSKMDWEI--VSWNCLMGGYVRKKR 230
Query: 573 MELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
++ A L P +D S+ +++ + G ++ + L E+L D ++W
Sbjct: 231 LD----DARSLFDRMPVRDKISWNIMITGYAQNGL---LSEARRLF--EELPIRDVFAWT 281
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVE---KAKCFGYKQQESFELTDE 680
+ V F N G+ ++ IF+ + E E A GY Q + E E
Sbjct: 282 AM---VSGFVQN-GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARE 329
>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
Length = 1124
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/589 (34%), Positives = 321/589 (54%), Gaps = 19/589 (3%)
Query: 173 PTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P+++T+ AL + S L +R G+Q+HA +K + + V SL SLY+ CG L+ A +
Sbjct: 547 PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQR 606
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + + + WT +I A + G+ + + + G++P+ FT + + C +
Sbjct: 607 VFDEMPHPSTVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIAD 666
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G V + G A ++ V + + LY+KCG + +A+++FD M H + V W AM+ G
Sbjct: 667 LATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGG 726
Query: 352 HAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+A NG EAL +F + + GMKPD Y + L+ C+RL AL+ G Q
Sbjct: 727 YAS------------NGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQA 774
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ FL + V+GTAL++MY KCG A VF +M + +I W +MI G
Sbjct: 775 IRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHE 834
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
A L M +GV+ N TF+G L +C++ G++ + YF M K Y I P ++HY C
Sbjct: 835 KIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC 894
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA + M N VI + GC+ H N EL + +QL+ L+P +
Sbjct: 895 MVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWN 954
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y ML +I+ + GRWED A ++ + + + + SW+ + KV+ F+ D HP S
Sbjct: 955 SGNYVMLSNIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLS 1014
Query: 651 AEIFKVLDELVEKAKCFGYKQQES---FELTDEESAS--VYHSEKLAIAFGLLNTPIVSP 705
+I+K LDEL + K GY+ F++ DEE V+HSEKLAIAF LL T
Sbjct: 1015 DQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGET 1074
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V K+ +C DCH IK+++ +T REIIVRD+ R H F +G C+C D+
Sbjct: 1075 IRVTKNLRVCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDY 1123
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 171/363 (47%), Gaps = 12/363 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L E +HA +K SH + V+T L+++Y KCG + AQ+VFD +P + V WT+LI+
Sbjct: 565 PLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQRVFDEMPHPSTVPWTALIT 624
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y+ A+HV + G P + T LTAC+ + + G+ + +
Sbjct: 625 AYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQ 684
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V + LY CG + A + F+++R K+ ++W ++G NG + L F M
Sbjct: 685 SVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQ 744
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+EG++P+ + + S C + +L +G Q + + N + +++ +Y KCG
Sbjct: 745 AEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTV 804
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
EA +F M +++ WNAMI G ++ H A ++ ++ SG+K +
Sbjct: 805 EAWVVFQQMRKKDIIVWNAMILGLG---------MTGHE--KIAFALVGQMEKSGVKLND 853
Query: 389 YTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
TF +L C+ ++ G + H +T + +V++ + G ++ A ++
Sbjct: 854 NTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQLVD 913
Query: 448 EMS 450
+M
Sbjct: 914 DMP 916
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 4/293 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A + G + + + V +L C L+ E + + G Q FV T V++Y K
Sbjct: 639 ARNAFANGMRPDSFTAVRVLTACARIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVK 698
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG M +A++VFD + + V+W +++ GY N P A+ +FL M G P + A
Sbjct: 699 CGEMAKAREVFDKMRHKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGA 758
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L+AC+ L ++ LG+Q V + D+ +G +L +Y+ CGS A F ++R+K++
Sbjct: 759 LSACTRLGALDLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDI 818
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W +I G G +M G++ N+ T + C ++ G +
Sbjct: 819 IVWNAMILGLGMTGHEKIAFALVGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHN 878
Query: 302 GIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
KL Y + R+ + ++ L + GL+ EA +L D M N V A++ G
Sbjct: 879 MTKL-YHISPRIEHYGCMVDLLSRAGLLQEAHQLVDDMPMPANAVILGALLGG 930
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/697 (32%), Positives = 365/697 (52%), Gaps = 77/697 (11%)
Query: 53 PVRSLGFQEALSVLTEGPK---VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
P +L FQ T P +Q ++LL C KS N + IH+ I+KTG H
Sbjct: 13 PPPTLHFQP-----TSDPPYKLLQNHPSLTLLSTC---KSFQNLKQIHSQIIKTGLHNTQ 64
Query: 110 FVMTFLVN--VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
F ++ L+ GN+ A +F+++ + N W ++I G +S P AI ++ ML
Sbjct: 65 FALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRML 124
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL- 226
G P + T L +C+ + + + GKQIH +V+K E D V SL ++Y+ G L
Sbjct: 125 LCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELG 184
Query: 227 ------------------------------NSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+ A + F I ++ +SW +I ++G
Sbjct: 185 YAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR 244
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L FF +M + PNE T+ ++ S C SL +G V S G SNLR+ N+
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG +D+A+ LF+G+ ++++WN MI G++ M N EAL++F
Sbjct: 305 LIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHM-----------NSYKEALALF 353
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKK 435
K+ S ++P+ TF SIL C+ L AL+ G+ IHA K L++ + T+L++MY K
Sbjct: 354 RKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAK 413
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG IE A +VF M ++L SW +MI+G A H ++ AL+LF M G P+ +TFVG
Sbjct: 414 CGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGV 473
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L+ACS+AG+V F M ++Y I P + HY C+ID+ R G +EA +K M+ +P
Sbjct: 474 LSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKP 533
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ IW + CR HGN+ELG +AA+ L +L+P++ +Y +L +I+ +AGRW+DVA ++
Sbjct: 534 DGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRT 593
Query: 616 LTREEKLSETDDWSWIRIKDKV-YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
++ + + D ++ D++ SF G P ++E+ +DE
Sbjct: 594 KLNDKGMKKXQD--IYKMLDEIDQSFGERPGXVPDTSEVLYDMDE--------------- 636
Query: 675 FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKS 711
+E + +HSEKLAIAFGL++T + I +VK+
Sbjct: 637 ---EWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKN 670
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 186/392 (47%), Gaps = 45/392 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S PV ++ F + +L G + + ++ LL+ C + + IH H++K G D
Sbjct: 110 SSSPVGAIDFY--VRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDP 167
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS--------------------- 148
FV T L+N+Y + G + A+ VF + VS+T+LI+
Sbjct: 168 FVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR 227
Query: 149 ----------GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
GY Q+ + E A+ F +M A P T+ T L+AC+ S+ LG +
Sbjct: 228 DAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVR 287
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L +YS CG L+ A F I EK+++SW +IG
Sbjct: 288 SWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYK 347
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS-LGIKLGYASNLRVRNSI 317
+ L F KM ++PN+ T SI C + +L +G +H+ + K +N + S+
Sbjct: 348 EALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSL 407
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y KCG ++ A+++F GM +L +WNAMI+G L+ H AL +F
Sbjct: 408 IDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG-----------LAMHGHANMALELFR 456
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
++ G +PD TF +L+ CS +E G Q
Sbjct: 457 QMRDEGFEPDDITFVGVLSACSHAGLVELGRQ 488
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/721 (31%), Positives = 372/721 (51%), Gaps = 83/721 (11%)
Query: 90 LSNAEI---IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV---VSW 143
+SN E+ IH +++ G + FV ++++YGKC + A+KVFD L + V+W
Sbjct: 139 ISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTW 198
Query: 144 TSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV 202
S++S Y P +A+ +F +M + G P V + L C L G+Q+H + V
Sbjct: 199 NSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCV 258
Query: 203 KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
+ +D VGN+L +Y+ CG + A K F R+R K+V++W ++ +NG L
Sbjct: 259 RSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALS 318
Query: 263 FFSKMLSEGIQ-----------------------------------PNEFTLTSISSVCG 287
F KM E I+ PN TL S+ S C
Sbjct: 319 LFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACA 378
Query: 288 TMLSLRVGAQVHSLGIKL-------GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--S 338
++ +L G + H +K +L V N+++ +Y KC ++ A+ +FD +
Sbjct: 379 SVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPK 438
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN--SSGMKPDLYTFSSILT 396
++VTW MI G+AQ H AL +FS++ + + P+ +T S +L
Sbjct: 439 DRDVVTWTVMIGGYAQ-----------HGDANHALQLFSEMFKIDNCIVPNDFTISCVLM 487
Query: 397 ICSRLVALEQGEQIHALTLKTGFL-SDVV-VGTALVNMYKKCGRIERASRVFVEMSTRTL 454
C+RL AL+ G+QIHA L+ + SDV+ V L++MY K G ++ A VF MS R
Sbjct: 488 ACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNA 547
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SWTS++TG+ H S A ++F++M + + +TF+ L ACS++GM
Sbjct: 548 VSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM---------- 597
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
++ + P ++HY C++D+ R G + EA I M EP V+W ++ CR H N E
Sbjct: 598 ---DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEE 654
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
L +AA++LL+LK + +Y +L +I+ +A RW+DVA + L + + + WSW++ +
Sbjct: 655 LAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGR 714
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC-FGYKQQESFELTDEESASVYHSEKLAI 693
+ +F D H QS +I++ L +L+++ K F + E D+ S HSEKLA+
Sbjct: 715 KGMETFYVGDRTHLQSQKIYETLADLIKRIKANFSLHDVDDEEKGDQLSE---HSEKLAL 771
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
A+ +L P +PI + K+ +C D H+ I I+ + EII+RDS R H+F NG C+C+
Sbjct: 772 AYAILTLPPGAPIRITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKG 831
Query: 754 F 754
+
Sbjct: 832 Y 832
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/552 (25%), Positives = 256/552 (46%), Gaps = 56/552 (10%)
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFV-MTFLVNVYGKCGNMEEAQKVFD---NLPR 137
Q+C K+L+ A+++H + G + + +T L+ Y ++ A + +
Sbjct: 32 QQC---KTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSH 88
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+V W LI + + P A+ +F M P + T AC + + LG I
Sbjct: 89 SSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASI 148
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV---MSWTTVIGACGEN 254
H V++ E + V N++ S+Y C ++ A K F+ + + + ++W +++
Sbjct: 149 HGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHC 208
Query: 255 GEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ F +M + GI P+ + +I VCG + G QVH ++ G ++ V
Sbjct: 209 FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFV 268
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS--------- 364
N+++ +Y KCG +++A K+F+ M ++VTWNAM+ G++Q +D LS
Sbjct: 269 GNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRF-EDALSLFGKMREEK 327
Query: 365 ---------------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
A G G EA+ +F ++ +P++ T S+L+ C+ + AL G+
Sbjct: 328 IESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGK 387
Query: 409 QIHALTLK-------TGFLSDVVVGTALVNMYKKCGRIERASRVFVEM--STRTLISWTS 459
+ H ++K D+ V AL++MY KC +E A +F E+ R +++WT
Sbjct: 388 ETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTV 447
Query: 460 MITGFANHSLSHQALQLFEDMLLAG--VRPNQVTFVGALAACSN-AGMVYEALGYFEMMQ 516
MI G+A H ++ ALQLF +M + PN T L AC+ A + + + +++
Sbjct: 448 MIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLR 507
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
+ V+ CLIDM+ + G ++ A FD + K N V W+ + G HG
Sbjct: 508 RSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR----NAVSWTSLLTGYGMHGRS 563
Query: 574 ELGFYAAEQLLK 585
E F +++ K
Sbjct: 564 EDAFRVFDEMRK 575
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/583 (24%), Positives = 243/583 (41%), Gaps = 142/583 (24%)
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS- 243
C +L +L Q Y++ + + +L Y + S+ +AI + EKNV
Sbjct: 34 CKTLTQAKLLHQ--QYIINGHLLNSYTNVTNLIYTYISSNSITNAI----LLLEKNVTPS 87
Query: 244 ------WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
W +I LR F +M + P+ +T + CG + + +GA
Sbjct: 88 HSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGAS 147
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL---VTWNAMIAGHAQ 354
+H I+LG+ SN+ V N+++ +Y KC V A+K+FD + + + VTWN++++ ++
Sbjct: 148 IHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSH 207
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
A+S+F ++ G+ PD +IL +C L G Q+H
Sbjct: 208 CF-----------VPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGF 256
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+++G + DV VG ALV+MY KCG++E A++VF M + +++W +M+TG++ + A
Sbjct: 257 CVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDA 316
Query: 474 LQLFEDM--------------LLAG---------------------VRPNQVTFVGALAA 498
L LF M +++G RPN VT + L+A
Sbjct: 317 LSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSA 376
Query: 499 CSNAGMVYEALGYFEMMQKE---YKIKPVM--DH---------YMCLIDMFVRLGCIEEA 544
C++ G + KE Y +K ++ +H LIDM+ + +E A
Sbjct: 377 CASVGALLHG--------KETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVA 428
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK----PKD------- 590
FD I D + V W+V I G +HG+ ++ K+ P D
Sbjct: 429 RAMFDEICPKD--RDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVL 486
Query: 591 --CESYAM---------------------------LLDIFVSAGRWEDVAVVKNLTREEK 621
C A L+D++ +G + VV +
Sbjct: 487 MACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVV-----FDS 541
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
+S+ + SW S G+H +S + F+V DE+ ++A
Sbjct: 542 MSKRNAVSWT-------SLLTGYGMHGRSEDAFRVFDEMRKEA 577
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 103/236 (43%), Gaps = 28/236 (11%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQD--FFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+L C +L + IHA++++ FV L+++Y K G+++ AQ VFD++ +
Sbjct: 485 VLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 544
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N VSWTSL++GY + + E A VF +M + +T L ACS + G
Sbjct: 545 RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSH-SGMDFGV-- 601
Query: 198 HAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC--G 252
D V + C L G L A++ N + E + W ++ AC
Sbjct: 602 -----------DPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIH 650
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL----RVGAQVHSLGIK 304
N E + F +K L E N+ T T +S++ R+G + GIK
Sbjct: 651 SNEELAE---FAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIK 703
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/697 (32%), Positives = 357/697 (51%), Gaps = 61/697 (8%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
GP ++ L N +L IHA I + V+T L++ +++
Sbjct: 32 AHGPSRSPETHFIPLIHASN--TLPQLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLD 89
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A +F N+ + +LI G +NS+ E ++ F+ ML P +TL L + +
Sbjct: 90 YALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVA 149
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN----VM 242
+L + LG+ +H V+K E D+ V SL +Y G L ++ F+ ++N ++
Sbjct: 150 ALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESIL 209
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W +I C + G+ + F M
Sbjct: 210 LWNVLINGCCKVGDLSKAASLFEAMPER-------------------------------- 237
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
N NS++ +++ G +D A++LF M N+V+W MI G +Q D K
Sbjct: 238 -------NAGSWNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEK-- 288
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
ALS+F ++ G++P+ T S L C+++ AL+ GE+IH GF +
Sbjct: 289 ---------ALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLN 339
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+GTALV+MY KCG I+ ASRVFVE + L++W+ MI G+A H QALQ F M
Sbjct: 340 RGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKS 399
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
AG+ P++V F+ L ACS++G V + L +FE M+ +Y I+P M HY ++D+ R G ++
Sbjct: 400 AGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLD 459
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA FI+ M P+ VIW CR H N+E+ AE+LL+L+PK SY L +++
Sbjct: 460 EALSFIQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYA 519
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
+ GRWEDV V+ L + + + WS+I ++ +V+SF D H ++ EI L+E+
Sbjct: 520 AVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITA 579
Query: 663 KAKCFGYKQQESF-----ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
AK GY + ++ E ++E A HSEKLA+AFGL++T S I +VK+ +C D
Sbjct: 580 SAKQEGYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGD 639
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH+ +K + L+ REII+RD KR H F +G C+C D+
Sbjct: 640 CHSMMKYASKLSRREIILRDIKRFHHFKDGTCSCGDY 676
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG+ E S+ ++ +L EG + + VS L C +L E IH ++ G
Sbjct: 283 NGDHEKALSMFWR----MLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQL 338
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ + T LV++Y KCGN++ A +VF ++++W+ +I G+ + + A+ F+ M
Sbjct: 339 NRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMK 398
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQ-IHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
AG P V LTACS ++ G + + Y E + L G L
Sbjct: 399 SAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRL 458
Query: 227 NSAIKAFNRIR-EKNVMSWTTVIGAC 251
+ A+ + + + W + AC
Sbjct: 459 DEALSFIQSMPINPDFVIWGALFCAC 484
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/674 (30%), Positives = 366/674 (54%), Gaps = 34/674 (5%)
Query: 95 IIHAHIVKTGSHQD--FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
+ H I+ Q+ F+ LV YG+C ++++A F + N S+ ++ Y +
Sbjct: 1 MTHERIIDANLEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQE 60
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL--ESIRLGKQIHAYVVKYQTEDDT 210
N + A+ +F + T T L +C+ L + + GK+IH + + D
Sbjct: 61 NDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDL 120
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
V NSL +Y+ CGS A F ++ KN++S+T++I A + V+ + KMLSE
Sbjct: 121 VVQNSLIHMYAKCGSFKFAAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSE 180
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR-----NSIMYLYLKCG 325
GI P+ + + +VC T +R G +H +KLG N R N+++ +Y + G
Sbjct: 181 GIMPDIYAYAAALAVCPT---IREGEAIH---VKLG---NHERRTPVCSNALVGMYGRFG 231
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+ A+ +FDG+ + +L ++N MIA A+ D G++A+S++ ++ ++
Sbjct: 232 RIASAKWVFDGIRYKDLASYNNMIAVFAKYDD-----------GSKAISLYIEMEGRNLE 280
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P+L+TF+S+L CS+L AL +G++IH +DV TALVNMY KCG A V
Sbjct: 281 PNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAV 340
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + + + +WTS+++ ++ S L+ ++ M GV P+ VTF ACS++G+
Sbjct: 341 FNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLP 400
Query: 506 YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
E L YF M++++ I P+ HY C+ID+ R+G + EA + ++ M + P+ V W++ ++
Sbjct: 401 DEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLS 460
Query: 566 GCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSET 625
C+ +G++++G A +++ +L P D Y ++ +++ AG+W DVA VK + ++ L++
Sbjct: 461 ACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKP 520
Query: 626 DDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESA 683
S I + +++ F D HP + EI L E+ E+ GY+ L D EE
Sbjct: 521 PGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVK 580
Query: 684 S---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
++HSE++A+ GLL + + + +VK+ +C DCH+F K+++ + R+++VRDS R
Sbjct: 581 PELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHR 640
Query: 741 LHKFVNGHCTCRDF 754
H F G C+C D+
Sbjct: 641 FHIFQRGSCSCGDY 654
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 189/402 (47%), Gaps = 37/402 (9%)
Query: 75 SSYVSLLQECVN--RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
++YV++L+ C + L + + IH H + G D V L+++Y KCG+ + A VF
Sbjct: 84 ATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVF 143
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
+ + N++S+TS+I Y ++ A ++ ML G P AL C +IR
Sbjct: 144 EKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCP---TIR 200
Query: 193 LGKQIHAYVVKYQTEDDTSV-GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+ IH + + E T V N+L +Y G + SA F+ IR K++ S+ +I
Sbjct: 201 EGEAIHVKLGNH--ERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVF 258
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ + + + + +M ++PN +T TS+ C + +L G ++H +++
Sbjct: 259 AKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDV 318
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+++ +Y KCG EA+ +F+ N+ TW ++++ ++Q G ++
Sbjct: 319 AYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQ------------PGQSQ 366
Query: 372 -ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG--------EQIHALTLKTGFLSD 422
L + ++N G+ PD TF++I CS ++G E + L+ +
Sbjct: 367 YRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHY--- 423
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITG 463
T ++++ + GR+ A + M + +++WT +++
Sbjct: 424 ----TCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSA 461
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 16/216 (7%)
Query: 62 ALSVLTEGPKVQTS--SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+L + EG ++ + ++ S+L C +L+ + IH + D T LVN+Y
Sbjct: 269 SLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTDVAYNTALVNMY 328
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
KCG+ EA+ VF++ NV +WTSL+S Y Q Q + + + M G P +VT
Sbjct: 329 AKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFT 388
Query: 180 TALTACS-------SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
ACS L R ++ H ++V Q + L G L A +
Sbjct: 389 AIFNACSHSGLPDEGLLYFRAMREDH-WIVPLQPH-----YTCMIDLLGRVGRLREAEEL 442
Query: 233 FNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
+ +V++WT ++ AC G+ G R + ++
Sbjct: 443 VRTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRI 478
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/636 (33%), Positives = 347/636 (54%), Gaps = 69/636 (10%)
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-----SLNSAIKAFNRIR 237
T C++ S+ KQ HA +++ D+ + SL Y+ S S+++ F+ +R
Sbjct: 41 TQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR 98
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ NV W +I C EN E + + + +M+ +PN++T ++ C + G Q
Sbjct: 99 KPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ 158
Query: 298 VHSLGIKLG--------------YASNLRV------------------RNSIMYLYLKCG 325
VH+ +K G YAS R+ N+++ YL+ G
Sbjct: 159 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG 218
Query: 326 LVDEAQKLFDGMSHVNLV-TWNAMIAGHAQ--MMDLAKD-----------DLSAHNGG-- 369
V+ A++LF+GM +++ TWNAMI+G ++ M+++A++ SA G
Sbjct: 219 EVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYI 278
Query: 370 -----TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
EAL IF ++ ++P + S+L+ C+ L AL+QG IH + D V
Sbjct: 279 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 338
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+GT+LV+MY KCGRI+ A VF +MS + + SW +MI G A H + A+ LF M
Sbjct: 339 LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---D 395
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ PN++TFVG L AC++ G+V + L F M+KEY ++P ++HY C++D+ R G + EA
Sbjct: 396 INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEA 455
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ + EP +W + CR+HGN+ELG + LL+L+P++ Y +L +I+ A
Sbjct: 456 EKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKA 515
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRI-KDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
GRWE+V V+ L +E + T S I + + +V+ F DG HPQ +I+++LD++ E+
Sbjct: 516 GRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKER 575
Query: 664 AKCFGYKQQES---FELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY+ S F++ +E E+A HSEKLAI FGL+NT + I +VK+ +C DC
Sbjct: 576 LQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDC 635
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H+ K+I+ + REIIVRD R H F NG C+C+DF
Sbjct: 636 HSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDF 671
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 205/473 (43%), Gaps = 88/473 (18%)
Query: 67 TEGPKVQTSSYVSLLQ-ECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-- 123
TE K+ + + LL +C SL + + HA I++TG QD ++ LV Y
Sbjct: 25 TETSKLSHKAILHLLNTQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTN 82
Query: 124 ---NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
+ E + +VFD + + NV W +I ++N++P AI ++ +M+ A P T
Sbjct: 83 RYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPA 142
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL-------------- 226
L ACS + G Q+HA++VK+ D + +S +Y++ G L
Sbjct: 143 VLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 202
Query: 227 -------------------------------------NSAIKAFNR-------------I 236
N+ I F+R +
Sbjct: 203 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEM 262
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+E++ +SW+ +I + G ++ L F +M E I+P +F L S+ S C + +L G
Sbjct: 263 KERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGR 322
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H+ + + + S++ +Y KCG +D A ++F+ MS+ + +WNAMI G
Sbjct: 323 WIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG----- 377
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTL 415
L+ H +A+ +FSK++ + P+ TF +L C+ +++G I +++
Sbjct: 378 ------LAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRK 428
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+ G + +V++ + G + A +V + T T W +++ H
Sbjct: 429 EYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 481
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 10/233 (4%)
Query: 59 FQEALSVL--TEGPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL + + K++ +V S+L C N +L IH + + D + T
Sbjct: 283 FMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS 342
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCG ++ A +VF+ + V SW ++I G + + E AI +F M P
Sbjct: 343 LVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPN 399
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T L AC+ ++ G I + K Y E + L G L A K
Sbjct: 400 EITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVV 459
Query: 234 NRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ I E W ++GAC ++G G R K+L E N T +S++
Sbjct: 460 SSIPTEPTPAVWGALLGACRKHGNVELGER-VGKILLELEPQNSGRYTLLSNI 511
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/723 (30%), Positives = 372/723 (51%), Gaps = 52/723 (7%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+ ALSV + T +Y +++ ++ A + + +D +++ Y
Sbjct: 77 ESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM----PDRDLISWNVMLSGY 132
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
K GN+ A+ +F+ +P +VVSW +++SG+ QN E A +F ML N L
Sbjct: 133 VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLS 192
Query: 180 TALTACSSLESIRLGKQ------------IHAYVVKYQTEDDTSV-----------GNSL 216
+ ++ RL + YV K + +D S+ N +
Sbjct: 193 AYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIM 252
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+ Y+ G L+ A + F + ++V +WT ++ +NG + R F +M + NE
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNE 308
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
+ ++ + G + S ++ + L ++ + N N+++ Y +CG +D+A+ LFD
Sbjct: 309 VSWNAM--IAGYVQSQQI-EKARELFDQMP-SRNTSSWNTMVTGYAQCGNIDQAKILFDE 364
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
M + ++W AMI+G+AQ EAL +F K+ G + + L+
Sbjct: 365 MPQRDCISWAAMISGYAQ-----------SGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C+ + ALE G+Q+H +K GF + + G AL+ MY KCG IE A VF +++ + ++S
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVS 473
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W +MI G+A H +AL LFE M + ++P+ VT VG L+ACS+ G V + + YF M
Sbjct: 474 WNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMY 532
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ Y I HY C+ID+ R G ++EA + +K M F P+ W + R HG+ ELG
Sbjct: 533 QNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELG 592
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
AAE++ +++P + Y +L +++ ++GRW +V +++ R++ + + +SW+ I++K
Sbjct: 593 EKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNK 652
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKL 691
+ F D HP++ I+ L+EL + K G+ L D E YHSEKL
Sbjct: 653 THIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYHSEKL 712
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A+AFG+L+ P PI V+K+ +C DCHN IK I+ +T R+IIVRDS R H F G C+C
Sbjct: 713 AVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSEGSCSC 772
Query: 752 RDF 754
D+
Sbjct: 773 GDY 775
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 190/456 (41%), Gaps = 79/456 (17%)
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D N S Y G SA+ FN +R ++ +++ +I N + + F K
Sbjct: 57 DSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEK 116
Query: 267 M-----LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL-GYASN---------- 310
M +S + + + S + + V S L G+A N
Sbjct: 117 MPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIF 176
Query: 311 --LRVRNSIMY-----LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL----- 358
+ V+N I + Y++ G +++A++LFD +V+WN ++ G+ + L
Sbjct: 177 DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARS 236
Query: 359 ------AKDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSS---------I 394
+D +S A NG +EA +F +L D++ +++ +
Sbjct: 237 LFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIR----DVFAWTAMVSGFVQNGM 292
Query: 395 LTICSRLV-ALEQGEQIHALTLKTGFLSDVVVGTA-----------------LVNMYKKC 436
L +R+ + + ++ + G++ + A +V Y +C
Sbjct: 293 LDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQC 352
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G I++A +F EM R ISW +MI+G+A S +AL LF M G N+ AL
Sbjct: 353 GNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACAL 412
Query: 497 AACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
++C+ A + + +++ ++ + + L+ M+ + G IEEAFD + + E
Sbjct: 413 SSCAEIAALELGKQLHGRLVKAGFQTGYIAGN--ALLAMYGKCGSIEEAFDVFEDIT-EK 469
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQL-LKLKPKD 590
+ V W+ IAG RHG + E + + +KP D
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMKMTIKPDD 505
Score = 45.4 bits (106), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 52/292 (17%)
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
SD+V ++ Y + G+ E A VF M R+ +++ +MI+G+ +++ A ++FE M
Sbjct: 58 SDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM 117
Query: 481 ----------LLAGVRPNQ-----------------VTFVGALAACSNAGMVYEALGYFE 513
+L+G N V++ L+ + G V EA F+
Sbjct: 118 PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFD 177
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIAGCRRHGN 572
M + +I + L+ +V+ G IE+A F KMD+E V W+ + G R
Sbjct: 178 QMLVKNEIS-----WNGLLSAYVQNGRIEDARRLFDSKMDWEI--VSWNCLMGGYVRKKR 230
Query: 573 MELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
++ A L P +D S+ +++ + G ++ + L E+L D ++W
Sbjct: 231 LD----DARSLFDRMPVRDKISWNIMITGYAQNGL---LSEARRLF--EELPIRDVFAWT 281
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVE---KAKCFGYKQQESFELTDE 680
+ V F N G+ ++ IF+ + E E A GY Q + E E
Sbjct: 282 AM---VSGFVQN-GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARE 329
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/564 (34%), Positives = 324/564 (57%), Gaps = 16/564 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ ++ K H +++ E D ++ N L + YS CG + A + F+ + E+++
Sbjct: 60 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 119
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+IG N + L F +M +EG + +EFT++S+ S CG ++H L
Sbjct: 120 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 179
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K NL V +++ LY KCG++ +A ++F+ M + VTW++M+AG+ Q
Sbjct: 180 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ------- 232
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL ++ + ++ + +T SS++ CS L AL +G+Q+HA+ K+GF S
Sbjct: 233 ----NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 288
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V V ++ V+MY KCG + + +F E+ + L W ++I+GFA H+ + + LFE M
Sbjct: 289 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 348
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ PN+VTF L+ C + G+V E +F++M+ Y + P + HY C++D+ R G +
Sbjct: 349 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 408
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA++ IK + F+P IW +A CR + N+EL AAE+L +L+P++ ++ +L +I+
Sbjct: 409 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIY 468
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+ +WE++A + L R+ + + SWI IKDKV++F + HP+ EI LD LV
Sbjct: 469 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 528
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + FGYK EL D +E + HSEKLA+ FGL+ P SP+ ++K+ +C
Sbjct: 529 IKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICV 588
Query: 717 DCHNFIKIITSLTAREIIVRDSKR 740
DCH F+K + T R IIVRD R
Sbjct: 589 DCHEFMKAASMATRRFIIVRDVNR 612
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 189/364 (51%), Gaps = 12/364 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+LQ C ++ A+ H I++ D ++ L+N Y KCG +E A++VFD + +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+VSW ++I Y +N A+ +FL+M G + T+ + L+AC K++H
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 178
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
VK + + VG +L LY+ CG + A++ F +++K+ ++W++++ +N +
Sbjct: 179 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 238
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L + + ++ N+FTL+S+ C + +L G Q+H++ K G+ SN+ V +S +
Sbjct: 239 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 298
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG + E+ +F + NL WN +I+G A+ H E + +F K+
Sbjct: 299 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK-----------HARPKEVMILFEKM 347
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGR 438
GM P+ TFSS+L++C +E+G + L T G +VV + +V++ + G
Sbjct: 348 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 407
Query: 439 IERA 442
+ A
Sbjct: 408 LSEA 411
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 166/326 (50%), Gaps = 20/326 (6%)
Query: 63 LSVLTEGPKVQTSSYVSLLQEC-VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
L + EG K + S+L C VN +L + +H VKT + +V T L+++Y K
Sbjct: 143 LEMRNEGFKFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAK 201
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG +++A +VF+++ + V+W+S+++GYVQN E A+ ++ TL +
Sbjct: 202 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 261
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ ACS+L ++ GKQ+HA + K + V +S +Y+ CGSL + F+ ++EKN+
Sbjct: 262 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 321
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W T+I ++ + + F KM +G+ PNE T +S+ SVCG + G + L
Sbjct: 322 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 381
Query: 302 -GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL-----FDGMSHVNLVTWNAMIAG---- 351
G + N+ + ++ + + GL+ EA +L FD + + W +++A
Sbjct: 382 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI----WGSLLASCRVY 437
Query: 352 -HAQMMDLAKD---DLSAHNGGTEAL 373
+ ++ ++A + +L N G L
Sbjct: 438 KNLELAEVAAEKLFELEPENAGNHVL 463
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 152/308 (49%), Gaps = 17/308 (5%)
Query: 268 LSEGIQPNEFT----LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+S G NEF+ + I +C ++ H I++ ++ + N ++ Y K
Sbjct: 41 VSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK 100
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG V+ A+++FDGM +LV+WN MI + + + +EAL IF ++ + G
Sbjct: 101 CGFVELARQVFDGMLERSLVSWNTMIGLYTR-----------NRMESEALDIFLEMRNEG 149
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
K +T SS+L+ C + +++H L++KT ++ VGTAL+++Y KCG I+ A
Sbjct: 150 FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAV 209
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+VF M ++ ++W+SM+ G+ + +AL L+ + NQ T + ACSN
Sbjct: 210 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 269
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E ++ K V +DM+ + G + E++ ++ E N +W+
Sbjct: 270 ALIEGKQMHAVICKSGFGSNVFVASSA-VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTI 327
Query: 564 IAGCRRHG 571
I+G +H
Sbjct: 328 ISGFAKHA 335
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 373 LSIFSKLNSSGMKPDLYT--FSS------ILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+S+ + + + P Y+ FS+ IL +C+R A+ + + H ++ DV
Sbjct: 30 ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 89
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ L+N Y KCG +E A +VF M R+L+SW +MI + + + +AL +F +M G
Sbjct: 90 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 149
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIE 542
+ ++ T L+AC G+ +AL ++ K ++ Y+ L+D++ + G I+
Sbjct: 150 FKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 206
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLK 587
+A + M + + V WS +AG ++ N E L Y Q + L+
Sbjct: 207 DAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 252
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 326/588 (55%), Gaps = 15/588 (2%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T + SLL C K+L +HA ++KTG+ D F+ ++N+Y KCG+ A++VFD
Sbjct: 3 TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFD 62
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ N+VSW+++ISGY Q +P++AI ++ M P + ++AC+SL ++ L
Sbjct: 63 EMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTL 119
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G++IH+ +K+ E + V NSL S+Y C + A+ F E N +S+ +I E
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
N + +GL FF M +G+ P+ F + +C T +L+ GA++H +KL S +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N I+ +Y + L+ EA+K F + ++++WN +IA + D AK L
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK-----------GL 288
Query: 374 SIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+F + + ++PD +TF+S L C+ L ++ G+QIHA ++T D+ VG ALVNM
Sbjct: 289 RVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNM 348
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG I A +F +M L+SW ++I GF NH L +A++LFE M +G+RP+ VTF
Sbjct: 349 YAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTF 408
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+G L AC++AG+V + YF M++ Y I P ++H+ CLIDM R G + EA ++++K
Sbjct: 409 IGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFP 468
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
F + V+ ++ R HG++ +G A+ LLKL+P Y +L +++ S G W+ VA
Sbjct: 469 FWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAE 528
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + L + S I + V F D H + EI +L L
Sbjct: 529 ARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576
>gi|242078125|ref|XP_002443831.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
gi|241940181|gb|EES13326.1| hypothetical protein SORBIDRAFT_07g002920 [Sorghum bicolor]
Length = 688
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/560 (35%), Positives = 314/560 (56%), Gaps = 25/560 (4%)
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
D N + Y CG L A +AF+ + ++N ++W ++G + G+ L F +ML
Sbjct: 139 DLYTHNHVLRTYLECGMLAEARRAFDGMPDRNGVTWGIMMGGLVDRGQPRAALALFREML 198
Query: 269 ------SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN---SIMY 319
+G P +L S R G Q+H +K G ++ R +++
Sbjct: 199 LAEEAGGDGDAPPPRSLVVALRAATASGSARAGQQLHCCVVKAGACGDVADRYLACALLD 258
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCGL+DEA+++FDG+ ++V WN+M+A + H EAL ++ ++
Sbjct: 259 MYSKCGLIDEARRVFDGLPRASVVAWNSMLAAYV-----------LHGRSEEALELYQEM 307
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
S + D +TFS++L + SRL LE +Q HA ++ G D+V TALV++Y K GR+
Sbjct: 308 CRSRVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGRM 367
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E A VF M R LISW ++I G+ H + +A+++FE ++ GV PN VTF+ L AC
Sbjct: 368 EDARNVFERMPRRNLISWNALIAGYGYHGMGDKAIEMFERLIAEGVVPNHVTFLAVLNAC 427
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
+G+V + F++M + ++KP HY C+I++F R G ++EA+ I++ F P +
Sbjct: 428 RFSGLVDKGKRIFQLMTENLRMKPRAMHYACVIELFGREGLLDEAYSMIRRAPFTPTANM 487
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + R H NM L AAEQLL ++P+ SYA+LL+++VS+GR +D V +
Sbjct: 488 WGALLTASRIHKNMHLAKLAAEQLLAMEPEKINSYAVLLNLYVSSGRQDDACKVVETLKR 547
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD 679
+ L + +WI +K + F D LHPQSAEI++ L L++ + GY +E+ L D
Sbjct: 548 KGLYIHNACTWITVKKTDHKFFFKDTLHPQSAEIYRRLHTLMKDVREAGYVAEENELLPD 607
Query: 680 -----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
++ +S YHSE+LAIAFGL++T +P+ + +S +CRDCH IK + +T REI+
Sbjct: 608 IYPDEQKVSSAYHSERLAIAFGLMSTAPQTPLRINQSHRLCRDCHKVIKFVAEVTKREIV 667
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
VRD R H F G C+C D+
Sbjct: 668 VRDGSRFHHFKLGICSCGDY 687
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 203/403 (50%), Gaps = 24/403 (5%)
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL 158
H+ +G D + ++ Y +CG + EA++ FD +P N V+W ++ G V QP
Sbjct: 130 HVESSGFDLDLYTHNHVLRTYLECGMLAEARRAFDGMPDRNGVTWGIMMGGLVDRGQPRA 189
Query: 159 AIHVFLDMLEA------GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS- 211
A+ +F +ML A G+ P +L AL A ++ S R G+Q+H VVK D +
Sbjct: 190 ALALFREMLLAEEAGGDGDAPPPRSLVVALRAATASGSARAGQQLHCCVVKAGACGDVAD 249
Query: 212 --VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
+ +L +YS CG ++ A + F+ + +V++W +++ A +G + + L + +M
Sbjct: 250 RYLACALLDMYSKCGLIDEARRVFDGLPRASVVAWNSMLAAYVLHGRSEEALELYQEMCR 309
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+ ++FT +++ V + L Q H+ I+ G ++ +++ LY K G +++
Sbjct: 310 SRVAMDQFTFSTMLGVFSRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGRMED 369
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLY 389
A+ +F+ M NL++WNA+IAG+ H G +A+ +F +L + G+ P+
Sbjct: 370 ARNVFERMPRRNLISWNALIAGYGY-----------HGMGDKAIEMFERLIAEGVVPNHV 418
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGRIERA-SRVFV 447
TF ++L C +++G++I L + + + A ++ ++ + G ++ A S +
Sbjct: 419 TFLAVLNACRFSGLVDKGKRIFQLMTENLRMKPRAMHYACVIELFGREGLLDEAYSMIRR 478
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
T T W +++T H H A +L + LLA + P ++
Sbjct: 479 APFTPTANMWGALLTASRIHKNMHLA-KLAAEQLLA-MEPEKI 519
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 132/272 (48%), Gaps = 14/272 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF---FVMTFLVNVYGKCGN 124
+G S V L+ S + +H +VK G+ D ++ L+++Y KCG
Sbjct: 206 DGDAPPPRSLVVALRAATASGSARAGQQLHCCVVKAGACGDVADRYLACALLDMYSKCGL 265
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++EA++VFD LPR +VV+W S+++ YV + + E A+ ++ +M + T T L
Sbjct: 266 IDEARRVFDGLPRASVVAWNSMLAAYVLHGRSEEALELYQEMCRSRVAMDQFTFSTMLGV 325
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S L + KQ HA +++ D +L LY G + A F R+ +N++SW
Sbjct: 326 FSRLGLLEHAKQAHAGLIQRGLPLDIVGNTALVDLYCKWGRMEDARNVFERMPRRNLISW 385
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I G +G + + F ++++EG+ PN T ++ + C + G ++ L
Sbjct: 386 NALIAGYGYHGMGDKAIEMFERLIAEGVVPNHVTFLAVLNACRFSGLVDKGKRIFQL--- 442
Query: 305 LGYASNLRVRNSIMY------LYLKCGLVDEA 330
NLR++ M+ L+ + GL+DEA
Sbjct: 443 --MTENLRMKPRAMHYACVIELFGREGLLDEA 472
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/588 (34%), Positives = 326/588 (55%), Gaps = 15/588 (2%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T + SLL C K+L +HA ++KTG+ D F+ ++N+Y KCG+ A++VFD
Sbjct: 3 TETLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFD 62
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ N+VSW+++ISGY Q +P++AI ++ M P + ++AC+SL ++ L
Sbjct: 63 EMFEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTL 119
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G++IH+ +K+ E + V NSL S+Y C + A+ F E N +S+ +I E
Sbjct: 120 GQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVE 179
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
N + +GL FF M +G+ P+ F + +C T +L+ GA++H +KL S +
Sbjct: 180 NQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFI 239
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N I+ +Y + L+ EA+K F + ++++WN +IA + D AK L
Sbjct: 240 GNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK-----------GL 288
Query: 374 SIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+F + + ++PD +TF+S L C+ L ++ G+QIHA ++T D+ VG ALVNM
Sbjct: 289 RVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNM 348
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG I A +F +M L+SW ++I GF NH L +A++LFE M +G+RP+ VTF
Sbjct: 349 YAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTF 408
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
+G L AC++AG+V + YF M++ Y I P ++H+ CLIDM R G + EA ++++K
Sbjct: 409 IGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFP 468
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
F + V+ ++ R HG++ +G A+ LLKL+P Y +L +++ S G W+ VA
Sbjct: 469 FWNDPVVLVSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAE 528
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + L + S I + V F D H + EI +L L
Sbjct: 529 ARKRLKGSGLKKEPGHSLIEVNGSVEKFTIGDFTHLRIKEIKGILKTL 576
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/611 (33%), Positives = 344/611 (56%), Gaps = 40/611 (6%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR-- 235
L + L C+ + + KQ+HA++ + E V L L T L+ + + R
Sbjct: 42 LVSVLHGCTHINQV---KQVHAHIFRKGLEQCCFV---LAKLLRTLTKLDVPMDPYPRLV 95
Query: 236 ---IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
+ N WT +I G ++ + ++ M +GI P FT T++ C L +
Sbjct: 96 FQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDV 155
Query: 293 RVGAQVHSLGIKL-GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+G QVH+ I + G+ S+L V N+++ +Y+KCG + ++FD M ++++W ++I
Sbjct: 156 NLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215
Query: 352 HAQMMDLA-----------KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTF 391
+A++ ++ KD ++ A N EAL +F ++ ++G+K D T
Sbjct: 216 YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTL 275
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGF--LSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+++ C++L A + + + ++GF S+VVVG+AL++MY KCG +E A +VF M
Sbjct: 276 VGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERM 335
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R + S++SMI GFA H L+ A++LF++ML ++PN+VTF+G L ACS+AGMV +
Sbjct: 336 EERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQ 395
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F MM++ + + P DHY C++D+ R G +EEA + +K M P+ +W + CR
Sbjct: 396 QLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRI 455
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
HGN ++ AA L +L+P +Y +L +I+ SAGRW+DV+ V+ L R + L + S
Sbjct: 456 HGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCS 515
Query: 630 WIRIKDK-VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASV 685
W+ K ++ F D HP+S EI + L++L+++ K GY+ S ++++DEE +
Sbjct: 516 WVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRL 575
Query: 686 Y--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
HSEKLA+AFGLL T I +VK+ +C DCH+ + + +T REI+VRD+ R H
Sbjct: 576 LMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHH 635
Query: 744 FVNGHCTCRDF 754
F +G C+C +F
Sbjct: 636 FRDGRCSCGNF 646
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 187/409 (45%), Gaps = 51/409 (12%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQ 129
K+ S VS+L C + ++ + +HAHI + G Q FV+ L+ K M+
Sbjct: 36 KILESRLVSVLHGCTH---INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYP 92
Query: 130 K-VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ VF + N WT+LI GY ++ ++ M G P + T L ACS+
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 189 ESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ LG+Q+H + D VGN+L +Y CG L + F+ + +++V+SWT++
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 248 IGA-------------------------------CGENGEAVQGLRFFSKMLSEGIQPNE 276
I A +N + L F +M + G++ +E
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA--SNLRVRNSIMYLYLKCGLVDEAQKLF 334
TL + S C + + + V + + G+ SN+ V ++++ +Y KCG V++A K+F
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVF 332
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ M N+ ++++MI G A H A+ +F ++ + +KP+ TF +
Sbjct: 333 ERMEERNVYSYSSMIVGFAM-----------HGLAGAAMELFDEMLKTEIKPNRVTFIGV 381
Query: 395 LTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERA 442
LT CS +EQG+Q+ A+ + G +V++ + GR+E A
Sbjct: 382 LTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEA 430
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 173/404 (42%), Gaps = 70/404 (17%)
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+D T L+ Y K GNME A ++FD LP ++V+WT++++GY QN++P A+ VF M
Sbjct: 204 RDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERM 263
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIH--AYVVKYQTEDDTSVGNSLCSLYSTCG 224
AG VTL ++AC+ L + + + A + + VG++L +Y+ CG
Sbjct: 264 QAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCG 323
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
S+ A K F R+ E+NV S++++I +G A + F +ML I+PN T + +
Sbjct: 324 SVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLT 383
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C G+V++ Q+LF M + V
Sbjct: 384 ACS-----------------------------------HAGMVEQGQQLFAMMEECHGVA 408
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
+ +A M+DL L EAL++ + M P + ++L C R+
Sbjct: 409 PSE--DHYACMVDL----LGRAGRLEEALNLVKMMP---MNPHGGVWGALLGAC-RIHGN 458
Query: 405 EQGEQI---HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----IS 456
QI H L+ + + ++ L N+Y GR + S+V M + L S
Sbjct: 459 PDMAQIAASHLFELEPNGIGNYIL---LSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCS 515
Query: 457 WT--------SMITGFANHSLSHQALQLFEDML----LAGVRPN 488
W G +H S + Q ED+L G +PN
Sbjct: 516 WVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPN 559
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 12/213 (5%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIH--AHIVKTGSHQ 107
N+ P +L E + G K + V ++ C + A + A G
Sbjct: 250 NARPREALEVFERMQ--AAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTS 307
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ V + L+++Y KCG++E+A KVF+ + NV S++S+I G+ + A+ +F +ML
Sbjct: 308 NVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEML 367
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ----TEDDTSVGNSLCSLYSTC 223
+ P VT LTACS + G+Q+ A + + +ED + + L
Sbjct: 368 KTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYAC---MVDLLGRA 424
Query: 224 GSLNSAIKAFNRI-REKNVMSWTTVIGACGENG 255
G L A+ + + W ++GAC +G
Sbjct: 425 GRLEEALNLVKMMPMNPHGGVWGALLGACRIHG 457
>gi|225450928|ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
[Vitis vinifera]
Length = 656
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/639 (33%), Positives = 339/639 (53%), Gaps = 25/639 (3%)
Query: 51 SEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT-----GS 105
S P+++L Q S T + LL C L +HA I+K G+
Sbjct: 22 SSPLKTLILQNPYSE-TSKFAINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGN 80
Query: 106 HQD-----FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
++D V L+++Y +CG + +A KVFD++P + +SW S ISG + N E+
Sbjct: 81 NRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIEMGF 140
Query: 161 HVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSL 219
VF + E+G Y + TL T LTAC E + K IH+ V Y E + +VGN+L +
Sbjct: 141 RVFKQLYESGIYQFDQATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITS 200
Query: 220 YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTL 279
Y CG +S + F+ + EKNV++WT VI + + L+ F KM + PN T
Sbjct: 201 YFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLTY 260
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
S C + ++R G Q+H L KLG +L + +++M +Y KCG +++A K+F+
Sbjct: 261 LSSLMACSGLQAIREGRQIHGLVWKLGVHFDLCIESALMDMYSKCGSLEDAWKIFESAEE 320
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
V+ V+ ++ G AQ NG E++ +F K+ +G+ D S+IL +
Sbjct: 321 VDEVSMTVILVGLAQ------------NGFEEESIQVFVKMVKNGVVIDPNMISAILGVF 368
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+L G+QIH+L +K F S+ V L+NMY KCG ++ + ++F M R +SW
Sbjct: 369 GIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNSVSWN 428
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
SMI FA H +ALQL+E+M L GV P VTF+ L AC++ G+V + +G+ E M K+
Sbjct: 429 SMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMAKD 488
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
Y I P M+HY C++DM R G + EA FI+++ +P ++W + C HGN E+G Y
Sbjct: 489 YGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMGKY 548
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AA QL P+ Y +L +I+ S G+W++ A ++ +++ SWI I+ +++
Sbjct: 549 AANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQIH 608
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
SF D +HP + I+ VL EL + GY + F L
Sbjct: 609 SFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKRFIL 647
>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 609
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 330/569 (57%), Gaps = 21/569 (3%)
Query: 195 KQIHAYVVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQIHA+ +++ N + +L S ++ A + FN+I+ N+ +W T+I
Sbjct: 52 KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111
Query: 253 ENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
E+ + FS+M + I P+ T + ++ + +G +HS+ ++ G+ S
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GT 370
V+NS++++Y G + A ++F+ MS+ + V WN++I G A NG
Sbjct: 172 FVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFAL------------NGMPN 219
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL+++ ++ S G++PD +T S+L+ C L AL GE++H +K G + + AL+
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALL 279
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y KCG A +VF EM R+++SWTS+I G A + L ++AL+LF ++ G++P+++
Sbjct: 280 DLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEI 339
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TFVG L ACS+ GM+ E YF M++EY I P ++H+ C++D+ R G + +A+D+I+
Sbjct: 340 TFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRN 399
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M PN VIW + C HG++ELG A ++ +L+ + + +L +++ S RW DV
Sbjct: 400 MPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDV 459
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V+ + + + +T +S + +K++VY F D HPQS E + +L ++ + K GY
Sbjct: 460 QNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYV 519
Query: 671 QQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ L D +E+A +H+EK+AIAF L+NTP +PI ++K+ +C DCH IK+I
Sbjct: 520 PRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLI 579
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + REIIVRD R H F +G C+C+D+
Sbjct: 580 SKVFEREIIVRDRSRFHHFKDGSCSCKDY 608
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 181/369 (49%), Gaps = 17/369 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+SL+Q C + S S + IHA ++ G F + + M A ++F+ +
Sbjct: 38 ISLVQLCGS--SQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQI 95
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRLG 194
N+ +W ++I G+ ++ P A+ +F M A + P T A + L + LG
Sbjct: 96 QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLG 155
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ IH+ VV+ + V NSL +YS G SA + F + ++ ++W +VI N
Sbjct: 156 EGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALN 215
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + L + +M SEG++P+ FT+ S+ S C + +L +G +VH +K+G N
Sbjct: 216 GMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHAS 275
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ LY KCG +AQK+FD M ++V+W ++I G L+ + G EAL
Sbjct: 276 NALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVG-----------LAVNGLGNEALK 324
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMY 433
+F +L G+KP TF +L CS L++G + + G L + +V++
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLL 384
Query: 434 KKCGRIERA 442
+ G++ A
Sbjct: 385 CRAGKVGDA 393
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 7/297 (2%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T ++ L + +S E IH+ +V+ G FV LV++Y G E A +VF+
Sbjct: 136 THTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQVFE 195
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + V+W S+I+G+ N P A+ ++ +M G P T+ + L+AC L ++ L
Sbjct: 196 IMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALAL 255
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+++H Y+VK + N+L LYS CG+ A K F+ + E++V+SWT++I
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAV 315
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLR 312
NG + L+ F ++ +G++P+E T + C L G + + G +
Sbjct: 316 NGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIE 375
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAM-----IAGHAQMMDLAKDDL 363
++ L + G V +A M N V W + I GH ++ ++A+ ++
Sbjct: 376 HHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEI 432
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG + + VSLL CV +L+ E +H ++VK G Q+ L+++Y KCGN
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+AQKVFD + +VVSWTSLI G N A+ +F ++ G P+ +T L ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349
Query: 187 SLESIRLG-----KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE--- 238
+ G + Y + + E + + LC G + A++ IR
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCR----AGKVGD---AYDYIRNMPV 402
Query: 239 -KNVMSWTTVIGACGENG 255
N + W T++GAC +G
Sbjct: 403 PPNAVIWRTLLGACTIHG 420
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/797 (28%), Positives = 393/797 (49%), Gaps = 103/797 (12%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
E L+V E G K + + +L+ C+ L +HA +VK G H D + L
Sbjct: 113 HEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCAL 172
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+N+Y K ++ A +VFD P W +++ +++ + E A+ +F M A T+
Sbjct: 173 INLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATD 232
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ L AC L ++ GKQIH YV+++ +TS+ NS+ S+YS L A AF+
Sbjct: 233 GTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDS 292
Query: 236 IREKNVMSWTTVIGACGEN------------------------------GEAVQG----- 260
+ N SW ++I + N G +QG
Sbjct: 293 TEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENV 352
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L F + S G +P+ ++TS + +G ++H ++ ++ V S++
Sbjct: 353 LTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDK 412
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA-------------QMMDLA-KDDLSAH 366
Y+K +D+A+ +F + N+ WN++I+G+ QM + K DL
Sbjct: 413 YIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTW 472
Query: 367 NG----------GTEALSIFSKLNSSGMKPDLYTFSSIL--------------------- 395
N EAL++ +++ S G+ P++ ++++++
Sbjct: 473 NSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQE 532
Query: 396 --------TICSRLVA------LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
TIC+ L A L+ GE+IH +++ GFL D+ + TAL++MY K G+++
Sbjct: 533 ENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKV 592
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A VF + +TL W M+ G+A + + LF++M GVRP+ +TF L+ C N
Sbjct: 593 AHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKN 652
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+G+V + YF+ M+ +Y I P ++HY C++D+ + G ++EA DFI + + + IW
Sbjct: 653 SGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWG 712
Query: 562 VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+A CR H ++++ AA LL+L+P + +YA++++I+ + RW DV +K
Sbjct: 713 AVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALG 772
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ-----QESFE 676
+ + WSWI++K ++ F HP+ EI+ L +L+ + K GY ++ +
Sbjct: 773 VKIPNVWSWIQVKQTIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQNID 832
Query: 677 LTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
+++E + H+EKLA+ +GL+ T SPI VVK+T +C DCH K I+ REI +R
Sbjct: 833 DSEKEKVLLSHTEKLAMTYGLMKTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLR 892
Query: 737 DSKRLHKFVNGHCTCRD 753
D R H F+NG C+C+D
Sbjct: 893 DGGRFHHFMNGECSCKD 909
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 142/563 (25%), Positives = 240/563 (42%), Gaps = 67/563 (11%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT-F 114
SLG EA L P+ + ++L++ +HA I+K ++ M
Sbjct: 12 SLGMSEA--QLVSSPQFSPPKFSPFFHPFGEIRTLNSVRELHAQIIKMPKKRNLVTMDGS 69
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ---NSQPELAIHVFLDMLEAGN 171
++ Y + G+ E A KVF N + W S I + +S LA VF ++ + G
Sbjct: 70 MMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDSHEILA--VFKELHDKGV 127
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
+ L L C +L + LG ++HA +VK D + +L +LY ++ A +
Sbjct: 128 KFDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQ 187
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F+ + W T++ A + + L F +M S + + T+ + CG + +
Sbjct: 188 VFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSASAKATDGTIVKLLQACGKLRA 247
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L G Q+H I+ G SN + NSI+ +Y + ++ A+ FD N +WN++I+
Sbjct: 248 LNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISS 307
Query: 352 HA------------QMMDLA--KDD-------LSAH--NGGTE-ALSIFSKLNSSGMKPD 387
+A Q M+ + K D LS H G E L+ F L S+G KPD
Sbjct: 308 YAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPD 367
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+ +S L L G++IH +++ DV V T+LV+ Y K +++A VF
Sbjct: 368 SCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFH 427
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
+ + +W S+I+G+ L A +L M G++P+ VT+ ++ S +G E
Sbjct: 428 HTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEE 487
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
AL + IK + PN V W+ I+GC
Sbjct: 488 ALA---------------------------------VINRIKSLGLTPNVVSWTAMISGC 514
Query: 568 RRHGNM--ELGFYAAEQLLKLKP 588
++ N L F++ Q +KP
Sbjct: 515 CQNENYMDALQFFSQMQEENVKP 537
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/621 (33%), Positives = 345/621 (55%), Gaps = 44/621 (7%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS--TCGSLNSAI 230
P N+ L + CS+ + + +Q+HA+ +K + V + L +LYS L A
Sbjct: 15 PHNLHL-SLFQTCSAPQEV---EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYAR 70
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F+RI+ ++++ W T+I EN + G+ F +++ E + P+ FTL + C +
Sbjct: 71 SIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLG 129
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV---------- 340
++ G Q+H L +K+G+ S++ V+ S++ +Y KCG +D A+K+FDGM
Sbjct: 130 VVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLID 189
Query: 341 -NLVTWNAMIAGHAQMMDLAKD----------DLSAHN---GGTE-------ALSIFSKL 379
NLV+WNAMI G+ + D DL N G E A+ +F +
Sbjct: 190 GNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMM 249
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
G +P T S+L+ S L L +G IH+ K GF D ++GT+L+ MY KCG I
Sbjct: 250 LKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCI 309
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E A VF + + + WT++I G H +++ AL LF +M G++PN + F+G L AC
Sbjct: 310 ESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNAC 369
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
++AG+V + YF+MM EYKI+P ++HY CL+D+ R G +EEA + I+ M PN+VI
Sbjct: 370 NHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVI 429
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W + G R HG +++G YAA++++++ P+ Y +L +++ ++G WE V+ V+ + +
Sbjct: 430 WMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYK 489
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-- 677
+ S + K ++ F D HPQ+ EI+ + E+ EK KC G+ + L
Sbjct: 490 RGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLC 549
Query: 678 ----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
++E+ HSE+LAIAFGL+N PI ++K+ +C DCH+ K+++ + +REI
Sbjct: 550 IEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREI 609
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
IVRD+ R H F NG C+C D+
Sbjct: 610 IVRDNCRFHHFKNGSCSCMDY 630
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 189/438 (43%), Gaps = 61/438 (13%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG--KCGNMEEAQKVFDN 134
++SL Q C + E +HA +KT FV + L+ +Y K ++ A+ +FD
Sbjct: 19 HLSLFQTC---SAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDR 75
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ R +++ W ++I YV+N I +F +++ P N TL + C+ L ++ G
Sbjct: 76 IQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEG 134
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA---- 250
KQIH +K D V SL ++YS CG ++ A K F+ + +K+V+ W ++I
Sbjct: 135 KQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVS 194
Query: 251 ----------CGE----------------------------NGEAVQGLRFFSKMLSEGI 272
G+ NG+ + ++ F ML G
Sbjct: 195 WNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGS 254
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+P+ TL S+ S + L G +HS K G+ + + S++ +Y KCG ++ A
Sbjct: 255 RPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALT 314
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+F + + W A+I G L H AL++F ++ +G+KP+ F
Sbjct: 315 VFRAIQKKKVGHWTAIIVG-----------LGIHGMANHALALFLEMCKTGLKPNAIIFI 363
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMS- 450
+L C+ ++ G Q + + + + LV++ + G +E A M
Sbjct: 364 GVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPI 423
Query: 451 TRTLISWTSMITGFANHS 468
+ + W S++ G NH
Sbjct: 424 SPNKVIWMSLLGGSRNHG 441
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 2/194 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + ++ VS+L L IH+++ K G D + T L+ +Y KCG
Sbjct: 249 MLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 308
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E A VF + + V WT++I G + A+ +FL+M + G P + L A
Sbjct: 309 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 368
Query: 185 CSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-NRIREKNVM 242
C+ + G+Q ++ +Y+ E L + G L A N N +
Sbjct: 369 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV 428
Query: 243 SWTTVIGACGENGE 256
W +++G +G+
Sbjct: 429 IWMSLLGGSRNHGK 442
>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
Length = 694
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 343/654 (52%), Gaps = 21/654 (3%)
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
F+ LVN+Y K A + P VVS+T+ ISG Q+ +P A+ F ML
Sbjct: 52 FICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAGMLRL 111
Query: 170 GNYPTNVTLGTALTACSSLESIR-LGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLN 227
G P + T +A A +S +G QIH+ +++ D V + +Y G L
Sbjct: 112 GLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLK 171
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F + +NV++W V+ +G ++ + + + G PN + + + C
Sbjct: 172 LARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACA 231
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ L +G Q H +K G+ ++ V NS++ Y KC +A+ +FDGM N V+W +
Sbjct: 232 GAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCS 291
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
M+A +AQ NG E A + + SG +P + SS LT C+ L+ L
Sbjct: 292 MVAAYAQ------------NGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHL 339
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G +HA+ +++ +++ V +ALV+MY KCG +E A ++F E R L++W +MI G+A+
Sbjct: 340 GRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAH 399
Query: 467 HSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ AL +F+DM+ +G PN +T V + +CS G+ + FE M++ + I+P
Sbjct: 400 IGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRT 459
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+HY C++D+ R G E+A++ I+ M P+ +W + C+ HG ELG AAE+L +
Sbjct: 460 EHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFE 519
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P+D ++ +L ++F SAGRW + ++ + + + SW+ K+ V+ F+ D
Sbjct: 520 LDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDT 579
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----EESASVY-HSEKLAIAFGLLNT 700
H EI +L +L ++ + GY + L D E+ + V+ HSEKLA+AFGL+
Sbjct: 580 KHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICI 639
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P PI ++K+ +C DCH K I+ + REIIVRD+ R H F C+C D+
Sbjct: 640 PPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDY 693
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 191/391 (48%), Gaps = 19/391 (4%)
Query: 96 IHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IH+ ++ G D FV +++Y K G ++ A+ +F +P NVV+W ++++ V +
Sbjct: 140 IHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDG 199
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+P I + + EAG P V+ AC+ + LG+Q H +VVK E D SV N
Sbjct: 200 RPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLN 259
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
S+ Y C A F+ + +N +SW +++ A +NG + + G +P
Sbjct: 260 SMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEP 319
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+F ++S + C +L L +G +H++ ++ +N+ V ++++ +Y KCG V++A+++F
Sbjct: 320 TDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIF 379
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTFSS 393
NLVTWNAMI G+A + D A N AL +F + SG P+ T +
Sbjct: 380 YETPQRNLVTWNAMIGGYAHIGD-------AQN----ALLVFDDMIRSGETAPNYITLVN 428
Query: 394 ILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++T CSR + G E + + G +V++ + G E+A V M R
Sbjct: 429 VITSCSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMR 488
Query: 453 TLIS-WTSMITGFANHSLSH----QALQLFE 478
IS W +++ H + A +LFE
Sbjct: 489 PSISVWGALLGACKMHGKTELGRIAAEKLFE 519
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 331/599 (55%), Gaps = 29/599 (4%)
Query: 185 CSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
CS+ +S L K++HA ++K + N+L + Y CG + A++ F+ + ++ ++
Sbjct: 12 CSAARQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVA 71
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM--LSLRVGAQVHSL 301
W +++ AC + + L +LS G P+ F S+ C + L ++ G QVH+
Sbjct: 72 WASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHAR 131
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA------QM 355
++ + V++S++ +Y K GL D + +FD +S +N ++W MI+G+A +
Sbjct: 132 FFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEA 191
Query: 356 MDLAKD--------------DLSAHNGGTEALSIFSKLNSSGMK-PDLYTFSSILTICSR 400
L + L G +A +F ++ G+ D SS++ C+
Sbjct: 192 FRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACAN 251
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
L E G+Q+H + + G+ S + + AL++MY KC + A +F EM + ++SWTS+
Sbjct: 252 LALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSI 311
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I G A H + +AL L+++M+LAGV+PN+VTFVG + ACS+AG+V + F M +++
Sbjct: 312 IVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHG 371
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
I P + HY CL+D+F R G ++EA + I+ M P+E W+ ++ C+RHGN ++ A
Sbjct: 372 ISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIA 431
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
+ LL LKP+D SY +L +I+ AG WEDV+ V+ L + + +S I + + F
Sbjct: 432 DHLLNLKPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVF 491
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAF 695
+ HP EI ++ EL E+ + GY S L D +E +HSE+LA+A+
Sbjct: 492 YAGETSHPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAY 551
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GLL + I +VK+ +C DCH +K+I+++T REI VRD+KR H F +G+C+C DF
Sbjct: 552 GLLKAVPGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDF 610
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 207/431 (48%), Gaps = 47/431 (10%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
R+S A+ +HA I+K G +Q + L+N YGKCG +++A ++FD LPR + V+W SL
Sbjct: 16 RQSPLLAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASL 75
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE--SIRLGKQIHAYVVKY 204
++ +++P A+ + +L G +P + + + AC++L ++ GKQ+HA
Sbjct: 76 LTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLS 135
Query: 205 QTEDDTSVGNSLCSLYSTCG-------------SLNS------------------AIKAF 233
DD V +SL +Y+ G SLNS A + F
Sbjct: 136 PFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLF 195
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTSISSVCGTMLSL 292
+ +N+ +WT +I ++G V F +M EGI + L+S+ C +
Sbjct: 196 RQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALW 255
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
+G Q+H + I LGY S L + N+++ +Y KC + A+ +F M ++V+W ++I G
Sbjct: 256 ELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGT 315
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-H 411
AQ H EAL+++ ++ +G+KP+ TF ++ CS + +G +
Sbjct: 316 AQ-----------HGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFR 364
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLS 470
+ G + T L++++ + G ++ A + M +W ++++ H +
Sbjct: 365 TMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNT 424
Query: 471 HQALQLFEDML 481
A+++ + +L
Sbjct: 425 QMAVRIADHLL 435
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S++ C N + +H ++ G F+ L+++Y KC ++ A+ +F + R
Sbjct: 244 SVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRK 303
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSWTS+I G Q+ Q E A+ ++ +M+ AG P VT + ACS + G+ +
Sbjct: 304 DVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLF 363
Query: 199 AYVVKYQTEDDTSVGNS------LCSLYSTCGSLNSAIKAFNRIREKNV----MSWTTVI 248
+V +D + S L L+S G L+ +A N IR V +W ++
Sbjct: 364 RTMV-----EDHGISPSLQHYTCLLDLFSRSGHLD---EAENLIRTMPVNPDEPTWAALL 415
Query: 249 GACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+C +G +R +L+ + P+ + L S
Sbjct: 416 SSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLS 449
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/773 (29%), Positives = 384/773 (49%), Gaps = 58/773 (7%)
Query: 10 AACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEG 69
AA + R P+ + A + K +R+ + + P +A +
Sbjct: 81 AAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRVP-------DAERLFAAM 133
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P+ TS+Y ++L L A I + D F L++ G ++ + +
Sbjct: 134 PRRSTSTYNTMLAGYAANGRLPQALSFFRSIPRP----DSFSYNTLLHALGVSSSLADVR 189
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P + VS+ +IS + + LA H F E N L
Sbjct: 190 ALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAA--------- 240
Query: 190 SIRLGK-QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+R G+ Q + +TE D N+L + Y + A K FN++ +++V+SW T++
Sbjct: 241 YVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMV 300
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQP--NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
G+ + R F + P + FT T+I S L +V
Sbjct: 301 SGYARRGDMAEARRLFD------VAPIRDVFTWTAIVSGYAQNGMLEEAKRVFDAMPD-- 352
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA----- 359
N N++M Y++ +++EA++LFD M N+ +WN M+ G+AQ M+D A
Sbjct: 353 --KNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFG 410
Query: 360 ----KDD------LSAHNG---GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
KD L+A++ E L +F ++ G + F+ +L+ C+ + ALE
Sbjct: 411 MMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALEC 470
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G Q+H+ +K G+ VG AL+ MY KCG +E A F EM R ++SW +MI G+A
Sbjct: 471 GMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAGYAR 530
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
H +AL++F+ M +P+ +T VG LAACS++G+V + + YF M +++ + +
Sbjct: 531 HGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPE 590
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C+ID+ R G ++EA + +K M FEP+ +W + R H N ELG AAE++ +L
Sbjct: 591 HYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFEL 650
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P++ Y +L +I+ S+G+W DV ++++ E + + +SWI +++KV++F D +
Sbjct: 651 EPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWIEVQNKVHTFSVGDSV 710
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTP 701
HP+ +I+ L++L + K GY L D E YHSEKLA+A+G+L P
Sbjct: 711 HPEREDIYAFLEDLDIRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILKIP 770
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+ +CRDCH K I+++ R II+RDS R H F +G C+C D+
Sbjct: 771 PGRPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNRFHHFRDGSCSCGDY 823
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 317/558 (56%), Gaps = 14/558 (2%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T + + +GK G + EA+ +FD +P +VV+WT +I+GY + A VF +M+
Sbjct: 48 TLIKSYFGK-GLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELD 106
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-SLNSAIK 231
P T+ + L AC ++ + G+ +H +K+ + V N+L +Y+TC S++ A
Sbjct: 107 PNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACM 166
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F I KN +SWTT+I + GLR F +ML E ++ N F+ + C ++ S
Sbjct: 167 VFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGS 226
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
G Q+H+ K G+ SNL V NSI+ +Y +C EA + F M+ +L+TWN +IAG
Sbjct: 227 HTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAG 286
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ + + TE+L +FS + S G P+ +TF+SI+ C+ L L G+QIH
Sbjct: 287 YER------------SNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIH 334
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
++ G ++ + AL++MY KCG I + +VF MS R L+SWT+M+ G+ H
Sbjct: 335 GRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGE 394
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A++LF+ M+ +G+RP++V F+ L+ACS+AG+V E L YF++M +Y I P + Y C+
Sbjct: 395 EAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCV 454
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ R G +EEA++ I+ M F+P+E +W F+ C+ H LG AA ++L L+P
Sbjct: 455 VDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMA 514
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+Y ML +I+ + G+W + A ++ L + + SW+ + + VYSF D + +
Sbjct: 515 GTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIE 574
Query: 652 EIFKVLDELVEKAKCFGY 669
I++VL+ L+ K GY
Sbjct: 575 GIYQVLENLIGHMKESGY 592
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 178/370 (48%), Gaps = 27/370 (7%)
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
+ +L Y G + A F+ + E++V++WT +I F +M++E
Sbjct: 45 LATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEE 104
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL-VDEA 330
+ PN FT++S+ C M L G VH L IK G + V N++M +Y C + +D+A
Sbjct: 105 LDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+F G+ N V+W +IAG+ +DD G L +F ++ ++ + ++
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTH-----RDD------GYGGLRVFRQMLLEEVELNPFS 213
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
FS + C+ + + GEQ+HA K GF S++ V ++++MY +C A+R F EM+
Sbjct: 214 FSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMN 273
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R LI+W ++I G+ S ++L +F M G PN TF +AAC+ L
Sbjct: 274 QRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACA-------TLA 325
Query: 511 YFEMMQKEYK--IKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
+ Q+ + I+ +D + LIDM+ + G I ++ M + V W+ +
Sbjct: 326 FLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS-RRDLVSWTAMM 384
Query: 565 AGCRRHGNME 574
G HG E
Sbjct: 385 IGYGTHGYGE 394
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 143/281 (50%), Gaps = 2/281 (0%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G + +L E ++ S+ ++ C + S + E +HA + K G + VM +++
Sbjct: 195 GLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILD 254
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y +C EA + F + + ++++W +LI+GY + S P +++VF M G P T
Sbjct: 255 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFT 313
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ + AC++L + G+QIH +++ + + ++ N+L +YS CG++ + + F +
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS 373
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++++SWT ++ G +G + + F KM+ GI+P+ +I S C + G +
Sbjct: 374 RRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLR 433
Query: 298 VHSLGI-KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
L + + + + ++ L + G V+EA +L + M
Sbjct: 434 YFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESM 474
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 2/187 (1%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG ++ S++ C L+ + IH I++ G + + L+++Y KCGN+
Sbjct: 304 SEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIA 363
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++ +VF + R ++VSWT+++ GY + E A+ +F M+ +G P V L+ACS
Sbjct: 364 DSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACS 423
Query: 187 SLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSW 244
+ G + +V Y D + + L G + A + + K + W
Sbjct: 424 HAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVW 483
Query: 245 TTVIGAC 251
+GAC
Sbjct: 484 GPFLGAC 490
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V+ T L+ Y G I A +F EM R +++WT MI G+ + + A +F +M+
Sbjct: 44 VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLG 539
+ PN T L AC GM + L Y ++ IK +D ++ L+DM+
Sbjct: 104 ELDPNAFTISSVLKACK--GM--KCLSYGRLVHG-LAIKHGLDGFIYVDNALMDMYATC- 157
Query: 540 CI--EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
C+ ++A + + + NEV W+ IAG + G Q+L
Sbjct: 158 CVSMDDACMVFRGIHLK-NEVSWTTLIAGYTHRDDGYGGLRVFRQML 203
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/582 (34%), Positives = 325/582 (55%), Gaps = 19/582 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L +C + S+ G+Q+H ++ DT + L LY+ CG + A + F+ + ++
Sbjct: 67 SVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKR 126
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV W +I A +G ++ + M+ G++P+ FT C +L L G +VH
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ + ++ V ++ +Y KCG VD+A+ +FD + + V WN+MIA + Q
Sbjct: 187 ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQ----- 241
Query: 360 KDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
NG EALS+ + ++G+ P + T S ++ + AL +G ++H + G
Sbjct: 242 -------NGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRG 294
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F + T+LV+MY K G ++ A +F ++ R L+SW +MI G+ H +AL+LF
Sbjct: 295 FDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFN 354
Query: 479 DMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVR 537
M + A V P+ +TFVG L+AC++ GMV EA +F +M Y IKP + H+ CL+D+
Sbjct: 355 KMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGH 414
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAML 597
G EEA+D IK M +P+ IW + GC+ H N+ELG A ++L++L+P+D +Y +L
Sbjct: 415 AGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLL 474
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL 657
+I+ +G+WE A V+ L L + SWI +K K + F D HP+SAEI++ L
Sbjct: 475 SNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEEL 534
Query: 658 DELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKST 712
+ L GY ++ D+E ++ HSE+LAIAFGL++TP + +LV K+
Sbjct: 535 ERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNL 594
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH IK+I+ + REII+RD R H FVNG C+C+D+
Sbjct: 595 RVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDY 636
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 201/405 (49%), Gaps = 17/405 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y S+LQ CV +SL +H ++ +G D + T LV++Y CG + A+++FD +P
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ NV W LI Y ++ E+AI ++ M++ G P N T AL AC++L + G++
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+H V+ +D V L +Y+ CG ++ A F+RIR ++ + W ++I A G+NG
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
++ L M + G+ P TL S S +L G ++H G + G+ +++ S
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K G V A+ LF+ + LV+WNAMI G+ H EAL +F
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGM-----------HGHFDEALKLF 353
Query: 377 SKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYK 434
+K+ + + PD TF +L+ C+ +++ ++ L + + V T LV++
Sbjct: 354 NKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLG 413
Query: 435 KCGRIERASRVFVEMSTRTLIS-WTSMITGFANHS---LSHQALQ 475
GR E A + M + W +++ G H L ALQ
Sbjct: 414 HAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQ 458
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 180/412 (43%), Gaps = 66/412 (16%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H ++ T +D FV LV++Y KCG +++A+ VFD + + V W S+I+ Y QN +
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P A+ + DM G PT TL + ++A + ++ G+++H + + + + S
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQP 274
L +Y+ G + A F ++ ++ ++SW +I G +G + L+ F+KM E + P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ T + S C G+V EA++ F
Sbjct: 365 DNITFVGVLSACN-----------------------------------HGGMVKEAKEFF 389
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
M V++ + + ++D+ H G E + + M+PD + ++
Sbjct: 390 GLM--VDVYSIKPTVQHFTCLVDVL-----GHAGRFE--EAYDLIKGMPMQPDSGIWGAL 440
Query: 395 LTICSRLVALEQGEQI--HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
L C +E GE + L+ + V+ L N+Y + G+ E+A+RV M+ R
Sbjct: 441 LNGCKIHKNVELGELALQKLIELEPEDAGNYVL---LSNIYAQSGKWEKAARVRKLMTNR 497
Query: 453 TL-----ISWTSM-------ITGFANHSLS---HQALQLFEDMLL-AGVRPN 488
L SW + + G A+H S ++ L+ E ++ AG P+
Sbjct: 498 GLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLMSDAGYMPD 549
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+ ++S+L C +L G Q+H L +G D V+ T LV++Y CG + A R+F
Sbjct: 63 HHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDG 122
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M R + W +I +A A+QL+ M+ GV P+ T+ AL AC+ +
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETG 182
Query: 509 LGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVF 563
E+ ++ D ++C L+DM+ + GC+++A FD I+ D V+W+
Sbjct: 183 R---EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRD----SVVWNSM 235
Query: 564 IAGCRRHG 571
IA ++G
Sbjct: 236 IAAYGQNG 243
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 347/658 (52%), Gaps = 32/658 (4%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNV 176
+Y KCG ++ A +VF + NVVSWT+L+ G++++ + + +M A P
Sbjct: 1 MYVKCGELDLACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEY 60
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
TL +L AC + G IH V+ ++ V +SL +YS G + A + F+
Sbjct: 61 TLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGA 120
Query: 237 R-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGI-QPNEFTLTSISSVCGTMLSLR 293
+ +W ++ G L F +M EG QP+EFT S+ C + + R
Sbjct: 121 GLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATR 180
Query: 294 VGAQVHSLGIKLGY--ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
GAQVH+ G+ ASN + +++ +Y+KC + A ++F+ + N++ W A++ G
Sbjct: 181 EGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVG 240
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
HAQ + TEAL +F + SG +PD + SS++ + + +EQG Q+H
Sbjct: 241 HAQEGQV-----------TEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVH 289
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
+K +DV G ++V+MY KCG + A R+F EM ++SWT+M+ G H L
Sbjct: 290 CYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGR 349
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A+ LFE+M GV P++VT++ L+ACS+AG+V E YF ++++ ++P +HY C+
Sbjct: 350 EAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACM 409
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ R G + EA D I+ M EP +W ++ CR H ++ +G A + LL + +
Sbjct: 410 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNP 469
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG---LHP 648
+Y L ++ AG W + V++ R L + SW+ + +V+ F G HP
Sbjct: 470 VNYVTLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHP 529
Query: 649 QSAEIFKVLDELVEKAK-CFGYKQQES-FEL--TDEESAS---VYHSEKLAIAFGLLNTP 701
Q+ +I +VL ++ + + GY ++ F L DEES + HSE+LA+ LL
Sbjct: 530 QAGDIRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNG 589
Query: 702 IVS-----PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ PI V K+ +C DCH F K ++++ R ++VRD+ R H+F +G C+C+D+
Sbjct: 590 VDGGGHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDY 647
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 16/309 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNS 154
IH V+ G + V + LV VY K G + +A++VFD + +W +++SGY
Sbjct: 81 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 140
Query: 155 QPELAIHVFLDML--EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDT 210
A+ VF +M E + P T + L ACS L + R G Q+HA + + T +
Sbjct: 141 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 200
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
+ +L +Y C L A++ F R+ KNV+ WT V+ + G+ + L F +
Sbjct: 201 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 260
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G +P+ L+S+ V + G QVH GIK +++ NSI+ +YLKCGL DEA
Sbjct: 261 GARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEA 320
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYT 390
+++F M N+V+W M+ G L H G EA+++F ++ + G++PD T
Sbjct: 321 ERMFREMRAPNVVSWTTMVNG-----------LGKHGLGREAVALFEEMRAGGVEPDEVT 369
Query: 391 FSSILTICS 399
+ ++L+ CS
Sbjct: 370 YLALLSACS 378
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 2/213 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
++ SLL+ C + +HA + +G + + + LV++Y KC + A +VF+
Sbjct: 165 TFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFE 224
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
L R NV+ WT+++ G+ Q Q A+ +F +G P + L + + + +
Sbjct: 225 RLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQ 284
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+Q+H Y +K T D S GNS+ +Y CG + A + F +R NV+SWTT++ G+
Sbjct: 285 GRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGK 344
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+G + + F +M + G++P+E T ++ S C
Sbjct: 345 HGLGREAVALFEEMRAGGVEPDEVTYLALLSAC 377
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H + +K + D +V++Y KCG +EA+++F + NVVSWT++++G ++
Sbjct: 288 VHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGL 347
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F +M G P VT L+ACS + ++ + + + +T + +
Sbjct: 348 GREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYA 407
Query: 216 -LCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGI 272
+ L G L A + E V W T++ AC + + G +L+ +G
Sbjct: 408 CMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGD 467
Query: 273 QP-NEFTLTSISSVCG 287
P N TL+++ + G
Sbjct: 468 NPVNYVTLSNVLAEAG 483
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/582 (33%), Positives = 327/582 (56%), Gaps = 23/582 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL---CSLYSTCGSLNSAIKAFNRIRE 238
L+ C+SL + KQI AY +K + D SV L C+L T ++ A F++I +
Sbjct: 36 LSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILD 92
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+++ + + + F ++L G+ P+++T +S+ C + +LR G +
Sbjct: 93 KDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGL 152
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H +KLG N+ + +++ +Y +C ++ A+ +FD M +V++NA+I G+A+
Sbjct: 153 HCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYAR---- 208
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+ EALS+F +L +S ++P T S++ C+ L AL+ G+ IH K G
Sbjct: 209 -------SSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKG 261
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F V V TAL++M+ KCG + A +F M R +W++MI FA H +A+ +FE
Sbjct: 262 FDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFE 321
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+M GVRP+++TF+G L ACS+AG+V + GYF M K Y I P + HY C++D+ R
Sbjct: 322 EMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRA 381
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G ++EA++F+ K++ + ++W ++ C HGN+E+ E++ +L Y +L
Sbjct: 382 GHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILS 441
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ GRWEDV ++ L ++ + + S + + + V+ F DG+H S E+ + LD
Sbjct: 442 NLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALD 501
Query: 659 ELVEKAKCFGYKQQESF------ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
EL+++ K GY S E +E YHSEKLA+AFGLLNTP + I V K+
Sbjct: 502 ELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNL 561
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN K+I+ + R+I++RD +R H+F +G C+C DF
Sbjct: 562 RICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDF 603
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 202/406 (49%), Gaps = 19/406 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDN 134
+SLL +C SL+ + I A+ +KT D V+T L+N + M+ A +FD
Sbjct: 33 LSLLSKCT---SLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQ 89
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ +++ + + GY +++ P LA +F ++L +G P + T + L AC+S +++R G
Sbjct: 90 ILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREG 149
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+H + VK + + +L ++Y+ C +N+A F+ + + ++S+ +I +
Sbjct: 150 MGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 209
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + L F ++ + I+P + T+ S+ C + +L +G +H K G+ ++V
Sbjct: 210 SQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVN 269
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ ++ KCG + +A +F+GM + W+AMI A H G +A+S
Sbjct: 270 TALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFA-----------THGDGLKAIS 318
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ G++PD TF +L CS +EQG ++++ G + +V++
Sbjct: 319 MFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLL 378
Query: 434 KKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFE 478
+ G ++ A ++ + T I W ++++ + H A ++ E
Sbjct: 379 GRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIE 424
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
L F +L G ++ SLL+ C + K+L +H VK G + + ++ L+
Sbjct: 113 LAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLI 172
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
N+Y +C +M A+ VFD + + +VS+ ++I+GY ++SQP A+ +F ++ + PT+V
Sbjct: 173 NMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDV 232
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ + + +C+ L ++ LGK IH YV K + V +L +++ CGSL AI F +
Sbjct: 233 TMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM 292
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG- 295
R ++ +W+ +I A +G+ ++ + F +M EG++P+E T + C + G
Sbjct: 293 RVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGR 352
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+S+ G ++ ++ L + G +DEA D + + W +++
Sbjct: 353 GYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSA 409
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 312/545 (57%), Gaps = 58/545 (10%)
Query: 219 LYSTC---GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA-VQGLRFFSKMLSEGIQP 274
+Y+ C GS++ + K F ++ E NVMSWT +I A ++GE + + F KM+S
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS----- 55
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
A V+ +G NS++ +Y + G +++A+K F
Sbjct: 56 ---------------------ASVNCVG------------NSLISMYARSGRMEDARKAF 82
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
D + NLV++NA++ G+A+ + EA +F+++ +G+ +TF+S+
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLK-----------SEEAFLLFNEIADTGIGISAFTFASL 131
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L+ + + A+ +GEQIH LK G+ S+ + AL++MY +CG IE A +VF EM R +
Sbjct: 132 LSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNV 191
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
ISWTSMITGFA H + +AL++F ML G +PN++T+V L+ACS+ GM+ E +F
Sbjct: 192 ISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNS 251
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M KE+ I P M+HY C++D+ R G + EA +FI M + ++W + CR HGN E
Sbjct: 252 MYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTE 311
Query: 575 LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIK 634
LG +AAE +L+ +P D +Y +L ++ SAG+W+DV ++ +E L + SWI ++
Sbjct: 312 LGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 371
Query: 635 DKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASVY---HSE 689
++V+ F + HPQ+ +I++ LD+L K K GY F L D EE + HSE
Sbjct: 372 NRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSE 431
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
K+A+AFGL++T PI + K+ +C DCH IK I+ T REI+VRDS R H NG C
Sbjct: 432 KIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVC 491
Query: 750 TCRDF 754
+C D+
Sbjct: 492 SCNDY 496
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 155/296 (52%), Gaps = 53/296 (17%)
Query: 118 VYGKC---GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PELAIHVFLDMLEAGNYP 173
+Y KC G++++++KVF+ +P NV+SWT++I+ YVQ+ + + AI +F M+
Sbjct: 1 MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI------ 54
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+A C VGNSL S+Y+ G + A KAF
Sbjct: 55 ------SASVNC--------------------------VGNSLISMYARSGRMEDARKAF 82
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + EKN++S+ ++ +N ++ + F+++ GI + FT S+ S ++ ++
Sbjct: 83 DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+H +K GY SN + N+++ +Y +CG ++ A ++F+ M N+++W +MI G A
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+ H T AL +F K+ +G KP+ T+ ++L+ CS + + +G++
Sbjct: 203 K-----------HGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 133/239 (55%), Gaps = 2/239 (0%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y + G ME+A+K FD L N+VS+ +++ GY +N + E A +F ++ + G +
Sbjct: 65 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 124
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T + L+ +S+ ++ G+QIH ++K + + + N+L S+YS CG++ +A + FN
Sbjct: 125 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 184
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++NV+SWT++I ++G A + L F KML G +PNE T ++ S C + +
Sbjct: 185 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 244
Query: 295 GAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
G + +S+ + G + ++ L + GL+ EA + + M + + W ++
Sbjct: 245 GQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGA 303
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 113/235 (48%), Gaps = 9/235 (3%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
++L +EA + E G + ++ SLL + ++ E IH ++K G +
Sbjct: 102 KNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQC 161
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ L+++Y +CGN+E A +VF+ + NV+SWTS+I+G+ ++ A+ +F MLE G
Sbjct: 162 ICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETG 221
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P +T L+ACS + I G K ++ ++ + L G L A
Sbjct: 222 TKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEA 281
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKML--SEGIQPNEFTLTS 281
++ N + + + W T++GAC +G G R ++M+ E P + L S
Sbjct: 282 MEFINSMPLMADALVWRTLLGACRVHGNTELG-RHAAEMILEQEPDDPAAYILLS 335
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 215/635 (33%), Positives = 342/635 (53%), Gaps = 68/635 (10%)
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSL-CSLYSTCGSLNSAIK 231
T++ ++ C +++ + KQ+HA ++K Q D + L S S L+ A K
Sbjct: 10 TSLWPPSSFFPCKTMQDL---KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARK 66
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTML 290
F + N S+ T+I A E+ + L F +M+ + ++PN FT S+ CG
Sbjct: 67 IFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAE 126
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK------------------ 332
LR G QVH L +K G S+ V ++++ +YL CG++++A +
Sbjct: 127 RLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKK 186
Query: 333 ----------------------------LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
LFD M ++V+WN MIAG+AQ S
Sbjct: 187 RRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQ---------S 237
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H EA+ +F ++ + + P+ T S+L SRL ALE G+ +H ++ D V
Sbjct: 238 GH--FKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDV 295
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+G+AL++MY KCG IE+A +VF + R +++W+++I G A H + L FEDM AG
Sbjct: 296 LGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAG 355
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V P+ VT++G L+ACS+AG+V E +F+ M + ++P ++HY C++D+ R G +EE+
Sbjct: 356 VMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEES 415
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ I M +P++VIW + C+ HGN+E+G AE L++L P D SY L +I+ S
Sbjct: 416 EELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASL 475
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
G WE VA V+ + +E + + SWI + ++ F D HP+S +I +L E+
Sbjct: 476 GNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSMLQEMSRNL 535
Query: 665 KCFGYKQQESFELT-----DEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCH 719
GY+ + LT D+ES+ YHSEK+AIAFGL++T +P+ + K+ +C DCH
Sbjct: 536 ILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCH 595
Query: 720 NFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ IK+I+ + R+IIVRD KR H FVNG C+C D+
Sbjct: 596 SSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDY 630
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 171/399 (42%), Gaps = 65/399 (16%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D + +++ Y + G +E A+ +FD +P+ +VVSW +I+GY Q+ + A+ VF +M
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
A P VTL + L A S L ++ LGK +H Y V+ D +G++L +Y+ CGS+
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIE 311
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A++ F + ++NV++W+T+I +G A L F M G+ P++ T + S C
Sbjct: 312 KALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACS 371
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
GLV+E + FD M V+ +
Sbjct: 372 -----------------------------------HAGLVNEGRWFFDHMVRVSGL--EP 394
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
I + M+DL G S LN +KPD + ++L C +E G
Sbjct: 395 RIEHYGCMVDLLG------RAGLLEESEELILNMP-IKPDDVIWKALLGACKMHGNVEMG 447
Query: 408 EQI--HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV---EMSTR-----TLISW 457
+++ H + L D AL N+Y G E ++V + EM R + I
Sbjct: 448 KRVAEHLMELAP---HDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIEL 504
Query: 458 TSMITGFANHSLSHQALQLFEDML--------LAGVRPN 488
+I F SH + ML L G RPN
Sbjct: 505 DGVIHEFLVEDDSHPKSKKIHSMLQEMSRNLILVGYRPN 543
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 217/492 (44%), Gaps = 76/492 (15%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLV--NVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
K++ + + +HA ++KT +D L+ + +++ A+K+F ++ R N S+ +
Sbjct: 22 KTMQDLKQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNT 81
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKY 204
LI +++ P A+ VF++M+E + P T + AC E +R G+Q+H VK+
Sbjct: 82 LIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKF 141
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR---------IREK---------------- 239
+ D V +++ +Y +CG + A + F R IR+K
Sbjct: 142 GLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMID 201
Query: 240 ---------------------NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+V+SW +I ++G + + F +M + PN T
Sbjct: 202 GYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVT 261
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
L S+ + +L +G VH ++ + + ++++ +Y KCG +++A ++F+G+
Sbjct: 262 LVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLP 321
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
N+VTW+ +IAG L+ H + L F + +G+ P T+ +L+ C
Sbjct: 322 KRNVVTWSTIIAG-----------LAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSAC 370
Query: 399 SRLVALEQGEQIHALTLK-TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LIS 456
S + +G ++ +G + +V++ + G +E + + + M + +
Sbjct: 371 SHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVI 430
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE--- 513
W +++ H ++ E ++ + P+ G+ A SN +Y +LG +E
Sbjct: 431 WKALLGACKMHGNVEMGKRVAEHLM--ELAPHD---SGSYVALSN---IYASLGNWEGVA 482
Query: 514 ---MMQKEYKIK 522
+M KE ++
Sbjct: 483 KVRLMMKEMDVR 494
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
Query: 59 FQEALSVLTEGPKVQTS-SYVSLLQECVNRKSLSNAEI---IHAHIVKTGSHQDFFVMTF 114
F+EA+ V E + +YV+L+ L E+ +H + V+ D + +
Sbjct: 240 FKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSA 299
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG++E+A +VF+ LP+ NVV+W+++I+G + + + + F DM AG P+
Sbjct: 300 LIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPS 359
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+VT L+ACS + G+ ++V+ E + L G L + +
Sbjct: 360 DVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELI 419
Query: 234 NR--IREKNVMSWTTVIGACGENGEAVQGLR 262
I+ +V+ W ++GAC +G G R
Sbjct: 420 LNMPIKPDDVI-WKALLGACKMHGNVEMGKR 449
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/591 (33%), Positives = 334/591 (56%), Gaps = 12/591 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + L + IH ++++ G D V+ +++ Y KC ++ +K+F+ L
Sbjct: 260 SVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDK 319
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSWT++I+G +QNS A+ +F++M+ G P + L +C SL++++ G+Q+H
Sbjct: 320 DVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVH 379
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AY +K ++D V N L +Y+ C SL +A K F+ + NV+S+ +I + V
Sbjct: 380 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLV 439
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F +M P T S+ + ++ L + +Q+H L IK G + + ++++
Sbjct: 440 EALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALI 499
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC V +A+ +F+ + ++V WNAM +G++Q ++ E+L ++
Sbjct: 500 DVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLE-----------NEESLKLYKD 548
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
L S +KP+ +TF++++ S + +L G+Q H +K G D V +LV+MY KCG
Sbjct: 549 LQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGS 608
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE + + F + R + W SMI+ +A H + +AL++FE M++ GV+PN VTFVG L+A
Sbjct: 609 IEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSA 668
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+AG++ +FE M K + I+P +DHY C++ + R G I EA +F+KKM +P V
Sbjct: 669 CSHAGLLDLGFHHFESMSK-FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAV 727
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR G++ELG YAAE + P D SY +L +IF S G W V +V+
Sbjct: 728 VWRSLLSACRVSGHVELGTYAAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMD 787
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ + WSWI + ++V+ F D H S I VLD L+ + K FGY
Sbjct: 788 MSRVVKEPGWSWIEVNNEVHRFIARDTAHRDSTLISLVLDNLILQIKGFGY 838
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 311/576 (53%), Gaps = 52/576 (9%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C +LS A +H +VK G QD +V T L++ Y K G ++EA+ +FD L
Sbjct: 159 SVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVK 218
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V+WT++I+GY + + E+++ +F M E YP + + L+ACS LE + GKQIH
Sbjct: 219 TTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIH 278
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
YV++ + D SV N + Y C + + K FNR+ +K+V+SWTT+I C +N
Sbjct: 279 GYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHG 338
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ F +M+ +G +P+ F TS+ + CG++ +L+ G QVH+ IK+ ++ V+N ++
Sbjct: 339 DAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLI 398
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC + A+K+FD ++ +N+V++NAMI G+++ +D L EAL +F +
Sbjct: 399 DMYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSR-----QDKL------VEALDLFRE 447
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ S P L TF S+L + S L LE QIH L +K G D G+AL+++Y KC
Sbjct: 448 MRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSC 507
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A VF E+ R ++ W +M +G++ + ++L+L++D+ ++ ++PN+ TF +AA
Sbjct: 508 VGDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAA 567
Query: 499 CSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE-------------- 543
SN A + + + ++++ P + + L+DM+ + G IEE
Sbjct: 568 ASNIASLRHGQQFHNQVIKMGLDDDPFVTN--SLVDMYAKCGSIEESHKAFSSTNQRDIA 625
Query: 544 -----------------AFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
A + ++M E PN V + ++ C G ++LGF+ E +
Sbjct: 626 CWNSMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM 685
Query: 584 LK--LKPKDCESYAMLLDIFVSAGR-WEDVAVVKNL 616
K ++P + YA ++ + AG+ +E VK +
Sbjct: 686 SKFGIEP-GIDHYACMVSLLGRAGKIYEAKEFVKKM 720
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 260/501 (51%), Gaps = 21/501 (4%)
Query: 96 IHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IHAHIV G HQ D F++ L++ Y K +AQK+FD +P N+V+W+S++S Y Q+
Sbjct: 73 IHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHG 132
Query: 155 QPELAIHVFLDMLEA-GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
A+ +F + + P L + + AC+ L ++ Q+H +VVK D VG
Sbjct: 133 YSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVG 192
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
SL Y+ G ++ A F+ ++ K ++WT +I + G + L+ F++M +
Sbjct: 193 TSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVY 252
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ + ++S+ S C + L G Q+H ++ G+ ++ V N I+ YLKC V +KL
Sbjct: 253 PDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKL 312
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F+ + ++V+W MIAG Q ++ +G +A+ +F ++ G KPD + +S
Sbjct: 313 FNRLVDKDVVSWTTMIAGCMQ---------NSFHG--DAMDLFVEMVRKGWKPDAFGCTS 361
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L C L AL++G Q+HA +K +D V L++MY KC + A +VF ++
Sbjct: 362 VLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAIN 421
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++S+ +MI G++ +AL LF +M L+ P +TFV L S+ ++ +
Sbjct: 422 VVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHC 481
Query: 514 MMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
++ K +D + LID++ + C+ +A +++ ++ + V+W+ +G +
Sbjct: 482 LI---IKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEI-YDRDIVVWNAMFSGYSQQL 537
Query: 572 NME--LGFYAAEQLLKLKPKD 590
E L Y Q+ +LKP +
Sbjct: 538 ENEESLKLYKDLQMSRLKPNE 558
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 202/402 (50%), Gaps = 12/402 (2%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ ++ +G K S+L C + ++L +HA+ +K D FV L+++Y KC
Sbjct: 345 VEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKC 404
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
++ A+KVFD + INVVS+ ++I GY + + A+ +F +M + + PT +T + L
Sbjct: 405 DSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLL 464
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
SSL + L QIH ++K+ D+ G++L +YS C + A F I +++++
Sbjct: 465 GLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIV 524
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
W + + E + L+ + + ++PNEFT ++ + + SLR G Q H+
Sbjct: 525 VWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQV 584
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
IK+G + V NS++ +Y KCG ++E+ K F + ++ WN+MI+ +AQ D AK
Sbjct: 585 IKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAK-- 642
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
AL +F ++ G+KP+ TF +L+ CS L+ G K G
Sbjct: 643 ---------ALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPG 693
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG 463
+ +V++ + G+I A +M + + W S+++
Sbjct: 694 IDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSA 735
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/672 (31%), Positives = 358/672 (53%), Gaps = 28/672 (4%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +H V G D FV + L +Y K ++A+KVFD +P + + W +L++G
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPG 192
Query: 153 NSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+ A+ F+ M++AG P + TL ++L A + + +G+ +H Y VK +
Sbjct: 193 SE----ALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
V L SLYS CG ++SA F+R+ +++++ +I NG + F ++ + G
Sbjct: 249 VVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASG 308
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+PN TL ++ V + +H+ +K ++ V ++ LY + ++ A+
Sbjct: 309 WRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESAR 368
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYT 390
+FD M + +WNAMI+G+AQ NG TE A+++F + ++P+ T
Sbjct: 369 SIFDAMLEKTMESWNAMISGYAQ------------NGLTEMAVALFQLMQELNVQPNPIT 416
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
SS L+ C+ L AL G+ +H + K +V V TAL++MY KCG I A +F M
Sbjct: 417 ISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMD 476
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
+ ++SW +MI+G+ H +AL+L++DML A + P TF+ + ACS+ G+V E
Sbjct: 477 NKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQK 536
Query: 511 YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV---IWSVFIAGC 567
F +M EY+I P ++H C++D+ R G + EA + I +F + + +W + C
Sbjct: 537 VFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELIS--EFPQSAIGPGVWGALLGAC 594
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
H N +L A+++L +L ++ Y +L +++ S + + AVV+ + KL +T
Sbjct: 595 MVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPG 654
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK---QQESFELTDEESAS 684
+ I I D+ + F D LHPQS I+ L+ L K GY+ + +++ +EE
Sbjct: 655 CTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEH 714
Query: 685 V--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
+ HSEKLAIAFGLL+T + I ++K+ +C DCHN K I+ +T R I+VRD+ R H
Sbjct: 715 MVKVHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFH 774
Query: 743 KFVNGHCTCRDF 754
F +G C+C D+
Sbjct: 775 HFRDGVCSCGDY 786
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 198/391 (50%), Gaps = 14/391 (3%)
Query: 61 EALSVLTEGPKVQ--TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
EA + + +V+ +++ S L+ ++ +H + VK G + V+T L+++
Sbjct: 197 EAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSL 256
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG+M+ AQ +FD + ++V++ +LISGY N E ++ +F ++ +G P + TL
Sbjct: 257 YSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTL 316
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ S L + +HA+VVK + + D V +L +LY + SA F+ + E
Sbjct: 317 VAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLE 376
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K + SW +I +NG + F M +QPN T++S S C + +L +G V
Sbjct: 377 KTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWV 436
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H + K N+ V +++ +Y KCG + EA+ +FD M + N+V+WNAMI+G+
Sbjct: 437 HRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYG----- 491
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKT 417
H G EAL ++ + + + P TF S++ CS +++G+++ +T +
Sbjct: 492 ------LHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEY 545
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+ T +V++ + G++ A + E
Sbjct: 546 RITPGIEHCTCMVDLLGRAGKLNEALELISE 576
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/673 (32%), Positives = 354/673 (52%), Gaps = 86/673 (12%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y K G ++EA+KVFD +P NVVSWT+L+ GYV N + ++A +F M E
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 175 NVTL------GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
V L G AC E I I TS+ + LC G ++
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIAR----------TSMIHGLCKE----GRVDE 190
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F+ + E++V++WTT++ G+N + F M + E + TS
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTS------- 239
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
ML +GY N G +++A++LF+ M ++ NAM
Sbjct: 240 ML--------------MGYVQN--------------GRIEDAEELFEVMPVKPVIACNAM 271
Query: 349 IAGHAQMMDLAK-----DDLSAHNGGT---------------EALSIFSKLNSSGMKPDL 388
I+G Q ++AK D + N + EAL +F + G++P
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T SIL++C+ L +L G+Q+HA ++ F DV V + L+ MY KCG + ++ +F
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYE 507
++ +I W S+I+G+A+H L +AL++F +M L+G +PN+VTFV L+ACS AGMV E
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L +E M+ + +KP+ HY C++DM R G EA + I M EP+ +W + C
Sbjct: 452 GLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H +++ + A++L++++P++ +Y +L +++ S GRW DVA ++ L + + ++
Sbjct: 512 RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Query: 628 WSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV 685
SW +++KV++F + HP+ I K+LDEL + GY S+ L D +E V
Sbjct: 572 CSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKV 631
Query: 686 ----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
YHSE+LA+A+ LL PI V+K+ +C DCH IKII+ + REII+RD+ R
Sbjct: 632 NSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRF 691
Query: 742 HKFVNGHCTCRDF 754
H F NG C+C+D+
Sbjct: 692 HHFRNGECSCKDY 704
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 179/368 (48%), Gaps = 55/368 (14%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
S + T +V YG+ +++A+K+FD +P VSWTS++ GYVQN + E A +F
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF- 257
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
V + AC+++ S LG++ G
Sbjct: 258 ----------EVMPVKPVIACNAMIS-GLGQK---------------------------G 279
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ A + F+ ++E+N SW TVI NG ++ L F M +G++P TL SI S
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
VC ++ SL G QVH+ ++ + ++ V + +M +Y+KCG + +++ +FD +++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVA 403
WN++I+G+A +H G EAL +F ++ SG KP+ TF + L+ CS
Sbjct: 400 WNSIISGYA-----------SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 404 LEQGEQIHALTLKTGFLSDVVVG--TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSM 460
+E+G +I+ ++++ F + +V+M + GR A + M+ + W S+
Sbjct: 449 VEEGLKIYE-SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 461 ITGFANHS 468
+ HS
Sbjct: 508 LGACRTHS 515
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 191/454 (42%), Gaps = 81/454 (17%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+A + P+ S+ S+L V + +AE + + + +++
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE----ELFEVMPVKPVIACNAMISGL 275
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
G+ G + +A++VFD++ N SW ++I + +N A+ +F+ M + G PT TL
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L+ C+SL S+ GKQ+HA +V+ Q + D V + L ++Y CG L + F+R K
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+++ W ++I +G + L+ F +M LS +PNE T + S C
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC------------ 443
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
YA G+V+E K+++ M V V + A +A M+D+
Sbjct: 444 -------SYA----------------GMVEEGLKIYESMESVFGV--KPITAHYACMVDM 478
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-------QIH 411
L EA+ + ++S ++PD + S+L C L+ E +I
Sbjct: 479 ----LGRAGRFNEAMEM---IDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISWTSMIT---- 462
T L L NMY GR + + M TR + SWT +
Sbjct: 532 PENSGTYIL--------LSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Query: 463 ----GFANHSLSHQALQLFE--DMLL--AGVRPN 488
G +H L++ + D LL AG P+
Sbjct: 584 FTRGGINSHPEQESILKILDELDGLLREAGYNPD 617
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 154/375 (41%), Gaps = 82/375 (21%)
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
Y T N + S G ++ A K F+ K++ SW +++ N +
Sbjct: 11 YSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKL 70
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F +M P+ N+ N ++ Y+K
Sbjct: 71 FDEM------PDR---------------------------------NIISWNGLVSGYMK 91
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSS 382
G +DEA+K+FD M N+V+W A++ G+ HNG + A S+F K+
Sbjct: 92 NGEIDEARKVFDLMPERNVVSWTALVKGY------------VHNGKVDVAESLFWKM--- 136
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGRIER 441
P+ S + + + L+ G A L D + T++++ K GR++
Sbjct: 137 ---PEKNKVSWTVML---IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A +F EMS R++I+WT+M+TG+ ++ A ++F+ M +V++ L
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQ 246
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPN 556
G + +A FE+M +KPV+ C +I + G I +A FD +K E N
Sbjct: 247 NGRIEDAEELFEVM----PVKPVI---ACNAMISGLGQKGEIAKARRVFDSMK----ERN 295
Query: 557 EVIWSVFIAGCRRHG 571
+ W I R+G
Sbjct: 296 DASWQTVIKIHERNG 310
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/669 (32%), Positives = 358/669 (53%), Gaps = 28/669 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HA V +G D FV + L +Y +A+KVFD +P + V W +L++G + S+
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAG-LSGSE 203
Query: 156 PELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
A+ F+ M AG+ P + TL + L A + + + +G+ +HA+ K V
Sbjct: 204 ---ALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVT 260
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L SLY+ CG + A F+R+ +++++ +I NG + F +++ G++P
Sbjct: 261 GLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRP 320
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ TL ++ V + +H+ +K G +N V ++ LY + +D A++ F
Sbjct: 321 SSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAF 380
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
D M + +WNAMI+G+AQ NG TE A+++F ++ + ++P+ T SS
Sbjct: 381 DAMPEKTMESWNAMISGYAQ------------NGLTEMAVALFQQMQALNVRPNPLTISS 428
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
L+ C++L AL G+ +H + +V V TAL++MY KCG I A +F M +
Sbjct: 429 ALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKN 488
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SW MI+G+ H +AL+L++DM+ A + P TF+ L ACS+ G+V E F
Sbjct: 489 VVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFR 548
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV---IWSVFIAGCRRH 570
M +Y I P ++H C++D+ R G ++EAF+ I +F + V IW + C H
Sbjct: 549 SMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELIS--EFPKSAVGPGIWGALLGACMVH 606
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+ +L A+++L +L+P++ Y +L +++ S ++ + AVV+ + KL +T +
Sbjct: 607 KDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTL 666
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
I I D+ + F D HPQS I+ L++L K GY+ L D +E
Sbjct: 667 IEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVK 726
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLAIAFGLLNT + I ++K+ +C DCHN KII+ +T R I+VRD+ R H F
Sbjct: 727 VHSEKLAIAFGLLNTEPGTEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFR 786
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 787 DGVCSCGDY 795
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 193/379 (50%), Gaps = 12/379 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ +++ S+L + + +HA K G Q V+T L+++Y KCG+ME A+
Sbjct: 218 RPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARH 277
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD + ++V++ +LISGY N ++ +F +++ G P++ TL + S
Sbjct: 278 LFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGH 337
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
L +HA+VVK + + V +L +LY ++SA +AF+ + EK + SW +I
Sbjct: 338 EPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISG 397
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG + F +M + ++PN T++S S C + +L +G VH + N
Sbjct: 398 YAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELN 457
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +++ +Y+KCG + EA+ +FD M + N+V+WN MI+G+ H G
Sbjct: 458 VYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGL-----------HGQGA 506
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTAL 429
EAL ++ + + + P TF S+L CS +++G + ++T G + T +
Sbjct: 507 EALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCM 566
Query: 430 VNMYKKCGRIERASRVFVE 448
V++ + G+++ A + E
Sbjct: 567 VDLLGRAGQLKEAFELISE 585
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/380 (30%), Positives = 188/380 (49%), Gaps = 20/380 (5%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ +HA V D V ++L LY T N A K F+ + + + W T++ G +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLA--GLS 200
Query: 255 GEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + L F +M G ++P+ TL S+ + + +G VH+ G K G A + V
Sbjct: 201 GS--EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EA 372
++ LY KCG ++ A+ LFD M +LVT+NA+I+G++ NG +
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSI------------NGMVGSS 306
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+ +F +L G++P T +++ + S +HA +K G ++ V TAL +
Sbjct: 307 VELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTL 366
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y + ++ A R F M +T+ SW +MI+G+A + L+ A+ LF+ M VRPN +T
Sbjct: 367 YCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTI 426
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
AL+AC+ G + +++ E K++ + LIDM+V+ G I EA MD
Sbjct: 427 SSALSACAQLGALSLGKWVHKIIANE-KLELNVYVMTALIDMYVKCGSIAEARCIFDSMD 485
Query: 553 FEPNEVIWSVFIAGCRRHGN 572
N V W+V I+G HG
Sbjct: 486 -NKNVVSWNVMISGYGLHGQ 504
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 334/612 (54%), Gaps = 49/612 (8%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
T L C +++ GKQ+HA++ K + N L +Y+ CGSL A K F+ + +
Sbjct: 124 TLLKFCLKQRALKEGKQVHAHI-KTSGSIGLYISNRLLDMYAKCGSLVDAEKVFDEMVHR 182
Query: 240 -----NVM--------------------------SWTTVIGACGENGEAVQGLRFFSKML 268
N+M SWT +I C ++ + L + M
Sbjct: 183 DLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALELYRLMQ 242
Query: 269 SEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ N+ T++S + + SL +G ++H +++G S+ V S++ +Y KCG +
Sbjct: 243 KHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSI 302
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+EA+ +FD M ++V+W MI H + + ++ E ++F L +S + P+
Sbjct: 303 EEARYIFDKMEERDVVSWTTMI--HTYLKNGRRE---------EGFALFRHLMNSNIMPN 351
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+TF+ +L C+ L A + G+QIHA ++ GF S +ALV+MY KCG IE A VF
Sbjct: 352 DFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFE 411
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
+ L SWTS++ G+A H +AL FE +L +G +P+ + F+G L+AC++AG+V +
Sbjct: 412 ILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDK 471
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L YF +++++ + +DHY C+ID+ R G EA I +M +P++ IW+ + GC
Sbjct: 472 GLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGC 531
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R HGN+EL AA+ L +++P++ +Y L +I+ SAG + A ++ + +
Sbjct: 532 RIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPG 591
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF-----ELTDEES 682
SWI I+ +V+ F D HP+S EI + L EL ++ K GY +F EL +E
Sbjct: 592 MSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEE 651
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
YHSEKLA+AFG+++TP +PI V K+ C DCHN IK I+++T R+IIVRDS R H
Sbjct: 652 NLSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFH 711
Query: 743 KFVNGHCTCRDF 754
F G C+C+D+
Sbjct: 712 CFEGGSCSCKDY 723
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 251/502 (50%), Gaps = 55/502 (10%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS------------- 105
+EA+ +L K S Y++LL+ C+ +++L + +HAHI +GS
Sbjct: 104 LREAVQLLYRIEKPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSGSIGLYISNRLLDMY 163
Query: 106 -----------------HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
H+D +++ Y K GN E+A+ +FD +P + SWT++IS
Sbjct: 164 AKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIIS 223
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
G VQ+++PE A+ ++ M + +N T+ +AL A +++ S+ +GK+IH ++++ +
Sbjct: 224 GCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLD 283
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D V SL +Y CGS+ A F+++ E++V+SWTT+I +NG +G F +
Sbjct: 284 SDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHL 343
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
++ I PN+FT + + C + + +G Q+H+ +++G+ S ++++++Y KCG +
Sbjct: 344 MNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDI 403
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+ A+ +F+ + +L +W +++ G+AQ H +AL F L SG KPD
Sbjct: 404 ENAKSVFEILPQPDLFSWTSLLVGYAQ-----------HGQHDKALHFFELLLKSGTKPD 452
Query: 388 LYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
F +L+ C+ +++G E H++ K G + ++++ + G+ A +
Sbjct: 453 GIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESII 512
Query: 447 VEMSTRT-LISWTSMITG---FANHSLSHQALQ-LFEDMLLAGVRP-NQVTFVGALAACS 500
EM + W +++ G N L+ +A + LFE + P N T+V +
Sbjct: 513 NEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE------IEPENPATYVTLANIYA 566
Query: 501 NAGMVYEALGYFEMMQKEYKIK 522
+AGM E E M +K
Sbjct: 567 SAGMRAEEANIRETMDSRGIVK 588
>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Cucumis sativus]
Length = 609
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 330/569 (57%), Gaps = 21/569 (3%)
Query: 195 KQIHAYVVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQIHA+ +++ N + +L S ++ A + FN+I+ N+ +W T+I
Sbjct: 52 KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRGFA 111
Query: 253 ENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
E+ + FS+M + I P+ T + ++ + +G +HS+ ++ G+ S
Sbjct: 112 ESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLR 171
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GT 370
V+NS++++Y G + A ++F+ MS+ + V WN++I G A NG
Sbjct: 172 FVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFAL------------NGMPN 219
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL+++ ++ S G++PD +T S+L+ C L AL GE++H +K G + + AL+
Sbjct: 220 EALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALL 279
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y KCG A +VF EM R+++SWTS+I G A + L ++AL+LF ++ G++P+++
Sbjct: 280 DLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEI 339
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TFVG L ACS+ GM+ E YF M++EY I P ++H+ C++D+ R G + +A+D+I+
Sbjct: 340 TFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRN 399
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M PN VIW + C HG++ELG A ++ +L+ + + +L +++ S RW DV
Sbjct: 400 MPVPPNAVIWRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDV 459
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V+ + + + +T +S + +K++VY F D HPQS E + +L ++ + K GY
Sbjct: 460 QNVRKIMLMKGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYV 519
Query: 671 QQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
+ L D +E+A +H+EK+AIAF L+NTP +PI ++K+ +C DCH IK+I
Sbjct: 520 PRTVNVLADIEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLI 579
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + REIIVRD R H F +G C+C+D+
Sbjct: 580 SKVFEREIIVRDRSRFHHFKDGSCSCKDY 608
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 183/369 (49%), Gaps = 17/369 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+SL+Q C + S S + IHA ++ G F + + M A ++F+ +
Sbjct: 38 ISLVQLCGS--SQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQI 95
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRLG 194
N+ +W ++I G+ ++ P A+ +F M A + P T A + L + LG
Sbjct: 96 QAPNIFTWNTMIRGFAESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLG 155
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+ IH+ VV+ + V NSL +YS GSL SA + F + ++ ++W +VI N
Sbjct: 156 EGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALN 215
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + L + +M SEG++P+ FT+ S+ S C + +L +G +VH +K+G N
Sbjct: 216 GMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHAS 275
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ LY KCG +AQK+FD M ++V+W ++I G L+ + G EAL
Sbjct: 276 NALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVG-----------LAVNGLGNEALK 324
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMY 433
+F +L G+KP TF +L CS L++G + + G L + +V++
Sbjct: 325 LFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLL 384
Query: 434 KKCGRIERA 442
+ G++ A
Sbjct: 385 CRAGKVGDA 393
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 145/297 (48%), Gaps = 7/297 (2%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T ++ L + +S E IH+ +V+ G FV LV++Y G++ A +VF+
Sbjct: 136 THTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQVFE 195
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + V+W S+I+G+ N P A+ ++ +M G P T+ + L+AC L ++ L
Sbjct: 196 IMSYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALAL 255
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+++H Y+VK + N+L LYS CG+ A K F+ + E++V+SWT++I
Sbjct: 256 GERVHMYMVKVGLVQNQHASNALLDLYSKCGNFRDAQKVFDEMEERSVVSWTSLIVGLAV 315
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLR 312
NG + L+ F ++ +G++P+E T + C L G + + G +
Sbjct: 316 NGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIE 375
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAM-----IAGHAQMMDLAKDDL 363
++ L + G V +A M N V W + I GH ++ ++A+ ++
Sbjct: 376 HHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVIWRTLLGACTIHGHLELGEVARAEI 432
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG + + VSLL CV +L+ E +H ++VK G Q+ L+++Y KCGN
Sbjct: 230 SEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNFR 289
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+AQKVFD + +VVSWTSLI G N A+ +F ++ G P+ +T L ACS
Sbjct: 290 DAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACS 349
Query: 187 SLESIRLG-----KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE--- 238
+ G + Y + + E + + LC G + A++ IR
Sbjct: 350 HCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCR----AGKVGD---AYDYIRNMPV 402
Query: 239 -KNVMSWTTVIGACGENG 255
N + W T++GAC +G
Sbjct: 403 PPNAVIWRTLLGACTIHG 420
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/603 (33%), Positives = 321/603 (53%), Gaps = 24/603 (3%)
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
L +L + P+ T + C S+ G ++H +++ ++ D + L +YS
Sbjct: 66 LRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
GS++ A K F++ R++ + W + A G + L + KM G++ + FT T +
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 284 SVC----GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
C T L G ++H+ + GY S++ + +++ +Y + G VD A +F+GM
Sbjct: 186 KACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPV 245
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKL--NSSGMKPDLYTFSSILT 396
N+V+W+AMIA +A+ NG EAL F ++ + P+ T S+L
Sbjct: 246 RNVVSWSAMIACYAK------------NGKAFEALRTFREMMTETKDSSPNSVTMVSVLQ 293
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
C+ L ALEQG IH L+ G S + V +ALV MY +CG+++ RVF M R ++S
Sbjct: 294 ACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVS 353
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
W S+I+ + H +A+Q+FE+ML G P VTFV L ACS+ G+V E FE M
Sbjct: 354 WNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMW 413
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+++ IKP ++HY C++D+ R ++EA ++ M EP +W + CR HGN+EL
Sbjct: 414 RDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
A+ +L L+PK+ +Y +L DI+ A W++V VK L L + W+ ++ K
Sbjct: 474 ERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRK 533
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKL 691
+YSF D +P +I L +L E K GY Q +EL EE + HSEKL
Sbjct: 534 MYSFVSMDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKL 593
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A+AFGL+NT PI + K+ +C DCH F K I+ +EI+VRD R H+F NG C+C
Sbjct: 594 ALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSC 653
Query: 752 RDF 754
D+
Sbjct: 654 GDY 656
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 209/413 (50%), Gaps = 22/413 (5%)
Query: 50 NSEPVRSL----GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGS 105
N++ ++SL ++AL VL++ +Y L+ C +R SLS+ +H HI+ GS
Sbjct: 49 NNQLIQSLCKEGKLKQALRVLSQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGS 108
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
QD F+ T L+ +Y G+++ A+KVFD + + W +L E + ++
Sbjct: 109 DQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWK 168
Query: 166 MLEAGNYPTNVTLGTALTACSSLE----SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
M G T L AC + E + GK+IHA++ + + +L +Y+
Sbjct: 169 MNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYA 228
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQPNEFTL 279
G ++ A FN + +NV+SW+ +I +NG+A + LR F +M++E PN T+
Sbjct: 229 RFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTM 288
Query: 280 TSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
S+ C ++ +L G +H ++ G S L V ++++ +Y +CG +D Q++FD M
Sbjct: 289 VSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHD 348
Query: 340 VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
++V+WN++I+ + H G +A+ IF ++ ++G P TF S+L CS
Sbjct: 349 RDVVSWNSLISSYG-----------VHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 400 RLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+E+G+++ ++ G V +V++ + R++ A+++ +M T
Sbjct: 398 HEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 108/215 (50%), Gaps = 14/215 (6%)
Query: 48 NGNS-EPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
NG + E +R+ F+E ++ T+ + + VS+LQ C + +L +IH +I++ G
Sbjct: 261 NGKAFEALRT--FREMMTE-TKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLD 317
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
V++ LV +YG+CG ++ Q+VFD + +VVSW SLIS Y + AI +F +M
Sbjct: 318 SILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEM 377
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQI-----HAYVVKYQTEDDTSVGNSLCSLYS 221
L G PT VT + L ACS + GK++ + +K Q E + L
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYA----CMVDLLG 433
Query: 222 TCGSLNSAIKAFNRIR-EKNVMSWTTVIGACGENG 255
L+ A K +R E W +++G+C +G
Sbjct: 434 RANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 923
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/688 (30%), Positives = 370/688 (53%), Gaps = 17/688 (2%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
++ SL+ C + +S +H+ ++TG H V+ LVN+Y G + +A+ +F
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
N+ R +++SW ++IS YVQN A+ +L P +T +AL ACSS ++
Sbjct: 306 WNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALM 365
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
G+ +HA ++ + VGNSL ++Y C S+ A + F + +V+S +IG+
Sbjct: 366 DGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYA 425
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLGYASNL 311
+ + ++ F M ++ N T+ +I + LR G +H+ I G+ S+
Sbjct: 426 VLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDD 485
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V NS++ +Y KCG ++ + +F + + ++V+WNAMIA + Q H G E
Sbjct: 486 YVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQ-----------HGHGEE 534
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+L +F + G D + ++ + L +LE+G Q+H L LK G +D V A ++
Sbjct: 535 SLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMD 594
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG+++ ++ + + R W ++I+G+A + +A + F+ M+ G P+ VT
Sbjct: 595 MYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDYVT 654
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
FV L+ACS+AG+V + + Y+ M + + P + H +C++D+ RLG EA FI+ M
Sbjct: 655 FVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIEDM 714
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
PN++IW ++ R H N+++G AA++LL+L P D +Y +L +++ ++ RW DV
Sbjct: 715 PVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSDVD 774
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
V++ + L++ SW++ K +V +F D H + +I+ LDE++ K + GY
Sbjct: 775 RVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGYVA 834
Query: 672 QESFEL--TDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
S L TDEE HSEKLA+A+GL+ P + + K+ +C DCH K+++
Sbjct: 835 DTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKLVS 894
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI++RD R H F G C+C DF
Sbjct: 895 MVFDREIVLRDPYRFHHFKGGSCSCSDF 922
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 239/485 (49%), Gaps = 23/485 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IHA K G + ++ T L+++YG ++ +AQ++F +P NVVSWT+L+ N
Sbjct: 66 IHALTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGH 125
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E A+ + M T ++ C SLE G Q+ ++V+ + SV NS
Sbjct: 126 LEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANS 185
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQP 274
L S+ G ++ A K F R+ E++ +SW ++ G + R FS M G ++
Sbjct: 186 LISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRH 245
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+ TL S+ SVC + + G+ VHSL ++ G S + V N+++ +Y G + +A+ LF
Sbjct: 246 DATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADAEFLF 305
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSS 393
MS +L++WN MI+ + Q NG +AL +L + PD TFSS
Sbjct: 306 WNMSRRDLISWNTMISSYVQ------------NGNNMDALKTLGQLLHTNEGPDRMTFSS 353
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
L CS AL G +HA+TL+ +++VG +L+ MY KC IE A R+F M
Sbjct: 354 ALGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHD 413
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++S +I +A +A+Q+F M V+ N +T V L + +++ L +
Sbjct: 414 VVSCNILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGSFTSS----NDLRNYG 469
Query: 514 MMQKEYKIKP--VMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ Y I + D Y+ LI M+ + G +E + + +++ + V W+ IA +
Sbjct: 470 LPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRI-INRSVVSWNAMIAANVQ 528
Query: 570 HGNME 574
HG+ E
Sbjct: 529 HGHGE 533
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 257/553 (46%), Gaps = 39/553 (7%)
Query: 44 LIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT 103
++ L+ N +LG+ + E +++ +++ C + + + +H++ +
Sbjct: 117 MVALSSNGHLEEALGYYRRMR--RERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVS 174
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF 163
G + V L+++ G G + +A+K+F + + VSW +L+S Y + VF
Sbjct: 175 GLQRQVSVANSLISMLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVF 234
Query: 164 LDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
DM G + TL + ++ C+S + + G +H+ ++ V N+L ++YS+
Sbjct: 235 SDMRRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSS 294
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
G L A F + ++++SW T+I + +NG + L+ ++L P+ T +S
Sbjct: 295 AGKLADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSA 354
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
C + +L G VH++ ++L NL V NS++ +Y KC +++A+++F M + ++
Sbjct: 355 LGACSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDV 414
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL-TICSRL 401
V+ N +I +A + D GT+A+ +F + +K + T +IL + S
Sbjct: 415 VSCNILIGSYAVLED-----------GTKAMQVFFWMRRGEVKLNYITIVNILGSFTSSN 463
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
G +HA T+ GFLSD V +L+ MY KCG +E ++ VF + R+++SW +MI
Sbjct: 464 DLRNYGLPLHAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMI 523
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC---------SNAGMVYEALGYF 512
H ++L+LF DM G + + LA C GM LG
Sbjct: 524 AANVQHGHGEESLKLFMDMRHDGNGLDHI----CLAECMSSSASLASLEEGMQLHGLGLK 579
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
+ + + +DM+ + G ++E + P + W+ I+G R+G
Sbjct: 580 CGLGNDSHVVNAA------MDMYGKCGKMDEMLKMLPDPAIRPQQC-WNTLISGYARYGY 632
Query: 573 MELGFYAAEQLLK 585
F AE+ K
Sbjct: 633 ----FKEAEETFK 641
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 206/430 (47%), Gaps = 27/430 (6%)
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR-LGKQIHAY 200
SW + ISG V+ + A + M E G + L + +TAC E R G IHA
Sbjct: 10 SWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHAL 69
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
K + +G +L LY + + A + F + E+NV+SWT ++ A NG +
Sbjct: 70 TQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEEA 129
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L ++ +M E I N ++ S+CG++ G QV S I G + V NS++ +
Sbjct: 130 LGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLISM 189
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL 379
G V +A+KLF M + V+WNA+++ + +H G +++ +FS +
Sbjct: 190 LGNLGRVHDAEKLFYRMEERDTVSWNALVS------------MYSHEGLCSKSFRVFSDM 237
Query: 380 NSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
G ++ D T S++++C+ + G +H+L L+TG S + V ALVNMY G+
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGK 297
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A +F MS R LISW +MI+ + + + AL+ +L P+++TF AL A
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFE 554
CS+ G + + M ++ + H + LI M+ + IE+A + M
Sbjct: 358 CSSPGALMDG-----RMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLM--- 409
Query: 555 PNEVIWSVFI 564
PN + S I
Sbjct: 410 PNHDVVSCNI 419
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 330/626 (52%), Gaps = 28/626 (4%)
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
+S LI + + + AI V L + P+ T + C S+ ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
++ ++ D + L +YS GS++ A K F++ R++ + W + A G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVC----GTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L + KM G++ + FT T + C T+ L G ++H+ + GY+S++ + +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSI 375
++ +Y + G VD A +F GM N+V+W+AMIA +A+ NG EAL
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK------------NGKAFEALRT 270
Query: 376 FSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
F ++ + P+ T S+L C+ L ALEQG+ IH L+ G S + V +ALV MY
Sbjct: 271 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+CG++E RVF M R ++SW S+I+ + H +A+Q+FE+ML G P VTFV
Sbjct: 331 GRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L ACS+ G+V E FE M +++ IKP ++HY C++D+ R ++EA ++ M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EP +W + CR HGN+EL A+ +L L+PK+ +Y +L DI+ A W++V V
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
K L L + W+ ++ K+YSF D +P +I L +L E K GY Q
Sbjct: 511 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 570
Query: 674 S---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
+EL EE + HSEKLA+AFGL+NT PI + K+ +C DCH F K I+
Sbjct: 571 KGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKF 630
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
+EI+VRD R H+F NG C+C D+
Sbjct: 631 MEKEILVRDVNRFHRFKNGVCSCGDY 656
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 222/444 (50%), Gaps = 30/444 (6%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSL----GFQEALSVLTEGPKVQT 74
+ PS S+A N ++S +G+K+ N++ ++SL ++A+ VL++
Sbjct: 26 KPPSCSVAL---NNPSIS-SGAGAKI----SNNQLIQSLCKEGKLKQAIRVLSQESSPSQ 77
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+Y L+ C +R SLS+A +H HI+ GS QD F+ T L+ +Y G+++ A+KVFD
Sbjct: 78 QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK 137
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE----S 190
+ + W +L E + ++ M G T L AC + E
Sbjct: 138 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 197
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK+IHA++ + + +L +Y+ G ++ A F + +NV+SW+ +I
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 251 CGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG+A + LR F +M+ E PN T+ S+ C ++ +L G +H ++ G
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S L V ++++ +Y +CG ++ Q++FD M ++V+WN++I+ + H
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG-----------VHGY 366
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGT 427
G +A+ IF ++ ++G P TF S+L CS +E+G+++ + G +
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 428 ALVNMYKKCGRIERASRVFVEMST 451
+V++ + R++ A+++ +M T
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRT 450
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 10/184 (5%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
VS+LQ C + +L ++IH +I++ G V++ LV +YG+CG +E Q+VFD +
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+VVSW SLIS Y + + AI +F +ML G PT VT + L ACS + GK++
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 198 -----HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
+ +K Q E + L L+ A K +R E W +++G+C
Sbjct: 409 FETMWRDHGIKPQIEHYA----CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 252 GENG 255
+G
Sbjct: 465 RIHG 468
>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 851
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/721 (31%), Positives = 374/721 (51%), Gaps = 33/721 (4%)
Query: 50 NSEPVRSLG-FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
+ +P R L F++ L + G V ++ V++L C +H K+G
Sbjct: 147 SGDPRRGLELFRDCLVAV--GGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAP 204
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML- 167
V LV++Y KCG + +A++ F P +VVSW ++ Y +N + A + DM
Sbjct: 205 ARVGNALVDMYAKCGELADAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGLLRDMQI 262
Query: 168 -EAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCG 224
E G+ P + +T+ + L ACS + +++HA+ V+ + + V N+L + Y CG
Sbjct: 263 KEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCG 322
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSIS 283
L A + F IR K V SW T+I A + A + F +M + G++P+ F++ S+
Sbjct: 323 RLLHADRVFTDIRRKTVSSWNTLISAHAQQNTAA-AIELFIQMTNACGLKPDGFSIGSLL 381
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE-AQKLFDGMSHVNL 342
C L H ++ G + +R S++ Y++C + A+ LFD M
Sbjct: 382 MACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGE 441
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNS-SGMKPDLYTFSSILTICSR 400
V W AMI+G++Q NG E+L +F ++ S G + + +S L CS
Sbjct: 442 VLWIAMISGYSQ------------NGLPGESLQLFREMQSVEGHCSSVISATSALMACSE 489
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-ISWTS 459
L ++ G+++H LK D + ++L++MY KCG +E A F + R +SWT+
Sbjct: 490 LSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTA 549
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF-EMMQKE 518
MITG+A + L +A++L+ M G+ P++ T++G L AC +AGM+ E L +F EM
Sbjct: 550 MITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHH 609
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
+KI+ ++HY C+I M R G +A + +M EP+ I S ++ C HG ELG
Sbjct: 610 HKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSD 669
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AE+LL+L+P E Y + +++ + RW+D+ V+ + R+ +++ SWI + KVY
Sbjct: 670 VAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVY 729
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAI 693
SF + HP+ ++ + L E+ + GY + L + E +HSEK A+
Sbjct: 730 SFVAGENPHPEMEQVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAV 789
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
FGLL T + + V K+ MC+DCHN ++I+ +T R+I+VRD KR H F G C+C D
Sbjct: 790 TFGLLRTATPATVRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGD 849
Query: 754 F 754
+
Sbjct: 850 Y 850
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 247/509 (48%), Gaps = 34/509 (6%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQN 153
+HA K G D FV LV++YG+CG +E+A+KVF +P N+VSW +L++ +
Sbjct: 90 VHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL--S 147
Query: 154 SQPELAIHVFLDMLEA-GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
P + +F D L A G TL T L C++L G+ +H K + V
Sbjct: 148 GDPRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARV 207
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-- 270
GN+L +Y+ CG L A +AF +V+SW ++GA N EA M +
Sbjct: 208 GNALVDMYAKCGELADAERAFPEA--PSVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEH 265
Query: 271 -GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVD 328
+ +E T+ S+ C L ++H+ ++ G A++ +V N+++ Y +CG +
Sbjct: 266 GSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLL 325
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPD 387
A ++F + + +WN +I+ HAQ A A+ +F ++ N+ G+KPD
Sbjct: 326 HADRVFTDIRRKTVSSWNTLISAHAQQNTAA------------AIELFIQMTNACGLKPD 373
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV-F 446
++ S+L C+ L + H L+ G D V+ +L++ Y +C R E +RV F
Sbjct: 374 GFSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLF 433
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMV 505
M + + W +MI+G++ + L ++LQLF +M + G + ++ AL ACS V
Sbjct: 434 DAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSV 493
Query: 506 YEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
LG EM K D ++ LIDM+ + G +E+A F ++ +V W+
Sbjct: 494 R--LGK-EMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAM 550
Query: 564 IAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
I G +G LG A E K++ + E
Sbjct: 551 ITGYAVNG---LGREAVELYGKMRREGME 576
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 34/346 (9%)
Query: 170 GNYPTNVTLGTALTACSSLE--SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P TL A +C L + G+Q+HA K D VGNSL S+Y CG +
Sbjct: 61 GIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVE 120
Query: 228 SAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSK-MLSEGIQPNEFTLTSISS 284
A K F I + +N++SW ++ A +G+ +GL F +++ G +E TL ++
Sbjct: 121 DAEKVFGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVDEATLVTVLP 178
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
+C + G VH L K G+ + RV N+++ +Y KCG + +A++ F V V+
Sbjct: 179 MCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELADAERAFPEAPSV--VS 236
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK------PDLYTFSSILTIC 398
WN M L A+ EA + F L +K D T S+L C
Sbjct: 237 WNVM--------------LGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPAC 282
Query: 399 SRLVALEQGEQIHALTLKTGF--LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
S L + ++HA T++ G SD V ALV Y +CGR+ A RVF ++ +T+ S
Sbjct: 283 SGPTELSRLRELHAFTVRRGLDAASDKVP-NALVAAYGRCGRLLHADRVFTDIRRKTVSS 341
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQVTFVGALAACSN 501
W ++I+ A + + A++LF M A G++P+ + L AC++
Sbjct: 342 WNTLISAHAQQNTA-AAIELFIQMTNACGLKPDGFSIGSLLMACAD 386
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 29/244 (11%)
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGA-----QVHSLGIKLGYASNLRVRNSIMYLYLK 323
SEGI P+ FTL + CG LRVGA QVH+L KLG + V NS++ +Y +
Sbjct: 59 SEGIAPDRFTLPPAARSCGF---LRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGR 115
Query: 324 CGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK-LN 380
CG V++A+K+F G+ N+V+WNA++A L+ D L +F L
Sbjct: 116 CGRVEDAEKVFGGIPDAARNIVSWNALMAA------LSGDP-------RRGLELFRDCLV 162
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+ G D T ++L +C+ L E G +H L K+G+ + VG ALV+MY KCG +
Sbjct: 163 AVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKCGELA 222
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL---AGVRPNQVTFVGALA 497
A R F E +++SW M+ + + + A L DM + V +++T + L
Sbjct: 223 DAERAFPEAP--SVVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLP 280
Query: 498 ACSN 501
ACS
Sbjct: 281 ACSG 284
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 24/246 (9%)
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICS--RLV 402
WNA++A H++ + + AL S G+ PD +T C R+
Sbjct: 32 WNALLADHSR---------AGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVG 82
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSM 460
A G Q+HAL K G D VG +LV+MY +CGR+E A +VF + + R ++SW ++
Sbjct: 83 AAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNAL 142
Query: 461 ITGFANHSLSHQALQLFEDMLLA-GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
+ + + L+LF D L+A G ++ T V L C+ G + K
Sbjct: 143 MAALSGD--PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSG 200
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
P L+DM+ + G E D + P+ V W+V + R N E G A
Sbjct: 201 WDAPARVGN-ALVDMYAKCG---ELADAERAFPEAPSVVSWNVMLGAYTR--NREAG--A 252
Query: 580 AEQLLK 585
A LL+
Sbjct: 253 AFGLLR 258
>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 774
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/768 (30%), Positives = 376/768 (48%), Gaps = 69/768 (8%)
Query: 20 QPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVS 79
QP + + + HT+S Q GN E +ALS++ P + Y
Sbjct: 42 QPETIARNVNTQIHTLSLQ----------GNLE--------KALSLVYTNPSLTLQDYAF 83
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
L C +K + +H +I+ D F+ L+N+Y KCG+++ A+ +FD +PR
Sbjct: 84 LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N VSWT L+SGY Q +F ML A P + L AC + ++ G Q+
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGML-ACFRPNEFAFASVLCACEE-QDVKYGLQV 201
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCG---------SLNSAIKAFNRIREKNVMSWTTVI 248
HA +K + V N+L ++YS C + + A F + +N++SW ++I
Sbjct: 202 HAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMI 261
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS----------LRVGAQV 298
G + + F+ M GI+ N TL + S +S L+ Q+
Sbjct: 262 SGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQL 321
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCG-LVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMM 356
H L +K G S + V +++ Y G + + KLF D ++V+W A+I+
Sbjct: 322 HCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIIS------ 375
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
+ A +A +F +L+ D +TFS L C+ V + ++H+ +K
Sbjct: 376 ------VFAERDPEQAFLLFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMK 429
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF +D VV AL++ Y + G + + +VF EM L+SW SM+ +A H + AL L
Sbjct: 430 QGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDL 489
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F+ M V P+ TFV LAACS+AG+V E F M + + I P +DHY C++D++
Sbjct: 490 FKQM---DVHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYG 546
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G I EA + I+KM +P+ VIWS + CR+HG +L AA++ L PK+ +Y
Sbjct: 547 RAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQ 606
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
+ +I+ S G + + +++ R+ K+ + SW+ + +V+ F HP+ I
Sbjct: 607 MSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSR 666
Query: 657 LDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSP-----I 706
L+ L+ + K GY + L D E + +HSEK+A+ F ++N I SP I
Sbjct: 667 LETLIGQLKEMGYAPEIGSALHDIEVEHIEDQLFHHSEKMALVFAIMNEGI-SPCAGNVI 725
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++K+ +C DCHNF+K+ + L +EI+VRDS R H F C+C D+
Sbjct: 726 KIMKNIRICVDCHNFMKLASKLFQKEIVVRDSNRFHHFKYATCSCNDY 773
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/636 (33%), Positives = 347/636 (54%), Gaps = 69/636 (10%)
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-----SLNSAIKAFNRIR 237
T C++ S+ KQ HA +++ D+ + SL Y+ S S+++ F+ +R
Sbjct: 42 TQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR 99
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ NV W +I C EN E + + + +M+ +PN++T ++ C + G Q
Sbjct: 100 KPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQ 159
Query: 298 VHSLGIKLG--------------YASNLRV------------------RNSIMYLYLKCG 325
VH+ +K G YAS R+ N+++ YL+ G
Sbjct: 160 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG 219
Query: 326 LVDEAQKLFDGMSHVNLV-TWNAMIAGHAQ--MMDLAKD-----------DLSAHNGG-- 369
V+ A++LF+GM +++ TWNAMI+G ++ M+++A++ SA G
Sbjct: 220 EVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYI 279
Query: 370 -----TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
EAL IF ++ ++P + S+L+ C+ L AL+QG IH + D V
Sbjct: 280 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGV 339
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+GT+LV+MY KCGRI+ A VF +MS + + SW +MI G A H + A+ LF M
Sbjct: 340 LGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---D 396
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+ PN++TFVG L AC++ G+V + L F M+KEY ++P ++HY C++D+ R G + EA
Sbjct: 397 IYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEA 456
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
+ + EP +W + CR+HGN+ELG + LL+L+P++ Y +L +I+ A
Sbjct: 457 EKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKA 516
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRI-KDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
GRWE+V V+ L +E + T S I + + +V+ F DG HPQ +I+++LD++ E+
Sbjct: 517 GRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKER 576
Query: 664 AKCFGYKQQES---FELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY+ S F++ +E E+A HSEKLAI FGL+NT + I +VK+ +C DC
Sbjct: 577 LQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVKNLRVCEDC 636
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H+ K+I+ + REIIVRD R H F NG C+C+DF
Sbjct: 637 HSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDF 672
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 193/421 (45%), Gaps = 57/421 (13%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N+EP +++ + V P T Y ++L+ C + ++ +HAH+VK G D
Sbjct: 116 NNEPFKAILLYYEMVVAHSRPNKYT--YPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDG 173
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+++ + +Y G + EA+++ D+ ++ V W ++I GY++ + E A +F M
Sbjct: 174 HILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM-- 231
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P + T N++ S +S CG +
Sbjct: 232 ----PDRSMISTW--------------------------------NAMISGFSRCGMVEV 255
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F+ ++E++ +SW+ +I + G ++ L F +M E I+P +F L S+ S C
Sbjct: 256 AREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 315
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ +L G +H+ + + + S++ +Y KCG +D A ++F+ MS+ + +WNAM
Sbjct: 316 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 375
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G L+ H +A+ +FSK++ + P+ TF +L C+ +++G
Sbjct: 376 IGG-----------LAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGL 421
Query: 409 QI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFAN 466
I +++ + G + +V++ + G + A +V + T T W +++
Sbjct: 422 TIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRK 481
Query: 467 H 467
H
Sbjct: 482 H 482
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 10/233 (4%)
Query: 59 FQEALSVL--TEGPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EAL + + K++ +V S+L C N +L IH + + D + T
Sbjct: 284 FMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTS 343
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCG ++ A +VF+ + V SW ++I G + + E AI +F M YP
Sbjct: 344 LVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPN 400
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T L AC+ ++ G I + K Y E + L G L A K
Sbjct: 401 EITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVV 460
Query: 234 NRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ I E W ++GAC ++G G R K+L E N T +S++
Sbjct: 461 SSIPTEPTPAVWGALLGACRKHGNVELGER-VGKILLELEPQNSGRYTLLSNI 512
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/687 (32%), Positives = 358/687 (52%), Gaps = 23/687 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V++L C + + + +H VK ++ + L+++Y KCG + AQ
Sbjct: 645 PDVAT--LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 702
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSS 187
+F NVVSW +++ G+ V ML G VT+ A+ C
Sbjct: 703 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 762
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ K++H Y +K + + V N+ + Y+ CGSL+ A + F+ IR K V SW +
Sbjct: 763 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 822
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG ++ + L +M G+ P+ FT+ S+ S C + SLR+G +VH I+
Sbjct: 823 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 882
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+L V S++ LY+ CG + Q LFD M +LV+WN +I G+ Q N
Sbjct: 883 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ------------N 930
Query: 368 GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G + AL +F ++ G++ + + CS L +L G + HA LK D +
Sbjct: 931 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 990
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L++MY K G I ++S+VF + ++ SW +MI G+ H L+ +A++LFE+M G
Sbjct: 991 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 1050
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ +TF+G L AC+++G+++E L Y + M+ + +KP + HY C+IDM R G +++A
Sbjct: 1051 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 1110
Query: 547 FI-KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++M E + IW ++ CR H N+E+G A +L +L+P+ E+Y +L +++ G
Sbjct: 1111 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 1170
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+WEDV V+ E L + SWI + KV+SF + EI + L K
Sbjct: 1171 KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS 1230
Query: 666 CFGYKQQE---SFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ +L++EE HSEKLA+ +GL+ T + I V K+ +C DCHN
Sbjct: 1231 KMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHN 1290
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNG 747
K+I+ + REI+VRD+KR H F NG
Sbjct: 1291 AAKLISKVMEREIVVRDNKRFHHFKNG 1317
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 245/507 (48%), Gaps = 29/507 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y +++ C + +H +VKTG +D FV LV+ YG G + +A ++FD +
Sbjct: 544 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 603
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN----YPTNVTLGTALTACSSLESI 191
P N+VSW S+I + N E + + +M+E P TL T L C+ I
Sbjct: 604 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 663
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H + VK + + + + N+L +YS CG + +A F KNV+SW T++G
Sbjct: 664 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 723
Query: 252 GENGEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
G+ +ML+ G ++ +E T+ + VC L ++H +K +
Sbjct: 724 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 783
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V N+ + Y KCG + AQ++F G+ + +WNA+I GHAQ D + L AH
Sbjct: 784 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAH--- 839
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
++ SG+ PD +T S+L+ CS+L +L G+++H ++ D+ V ++
Sbjct: 840 -------LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 892
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y CG + +F M ++L+SW ++ITG+ + +AL +F M+L G++
Sbjct: 893 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 952
Query: 490 VTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
++ + ACS G A +++ + I LIDM+ + G I ++
Sbjct: 953 ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA------CSLIDMYAKNGSITQS 1006
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ E + W+ I G HG
Sbjct: 1007 SKVFNGLK-EKSTASWNAMIMGYGIHG 1032
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 19/429 (4%)
Query: 80 LLQECVNRKSLSNAEIIHAHIV-KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ RK + IH + T D + T ++ +Y CG+ ++++ VFD L
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W ++IS Y +N + + F++M+ + P + T + AC+ + + +G +
Sbjct: 505 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H VVK +D VGN+L S Y T G + A++ F+ + E+N++SW ++I +NG +
Sbjct: 565 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624
Query: 258 VQGLRFFSKMLSE----GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ +M+ E P+ TL ++ VC + +G VH +KL L +
Sbjct: 625 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N++M +Y KCG + AQ +F ++ N+V+WN M+ G SA
Sbjct: 685 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG-----------FSAEGDTHGTF 733
Query: 374 SIFSKLNSSG--MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+ ++ + G +K D T + + +C L +++H +LK F+ + +V A V
Sbjct: 734 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 793
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG + A RVF + ++T+ SW ++I G A + +L M ++G+ P+ T
Sbjct: 794 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 853
Query: 492 FVGALAACS 500
L+ACS
Sbjct: 854 VCSLLSACS 862
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 209/414 (50%), Gaps = 18/414 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E K + ++ + C + L + + +H + +K + V V Y KCG++
Sbjct: 744 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 803
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VF + V SW +LI G+ Q++ P L++ L M +G P + T+ + L+ACS
Sbjct: 804 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 863
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L+S+RLGK++H ++++ E D V S+ SLY CG L + F+ + +K+++SW TV
Sbjct: 864 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 923
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L F +M+ GIQ ++ + C + SLR+G + H+ +K
Sbjct: 924 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 983
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + S++ +Y K G + ++ K+F+G+ + +WNAMI G+ H
Sbjct: 984 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-----------IHG 1032
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVG 426
EA+ +F ++ +G PD TF +LT C+ + +G + + G ++
Sbjct: 1033 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 1092
Query: 427 TALVNMYKKCGRIERASRVFV-EMSTRTLIS-WTSMITGFANHSLSHQALQLFE 478
+++M + G++++A RV EMS + W S+++ HQ L++ E
Sbjct: 1093 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS----CRIHQNLEMGE 1142
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 21/332 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
LG L A + I +G++IH V + +D + + ++Y+ CGS + + F+
Sbjct: 441 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 500
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRV 294
+R KN+ W VI + N + L F +M+S + P+ FT + C M + +
Sbjct: 501 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 560
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA---- 350
G VH L +K G ++ V N+++ Y G V +A +LFD M NLV+WN+MI
Sbjct: 561 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 620
Query: 351 -GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G ++ L ++ NG PD+ T ++L +C+R + G+
Sbjct: 621 NGFSEESFLLLGEMMEENG------------DGAFMPDVATLVTVLPVCAREREIGLGKG 668
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H +K ++V+ AL++MY KCG I A +F + + ++SW +M+ GF+
Sbjct: 669 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 728
Query: 470 SHQALQLFEDMLLAG--VRPNQVTFVGALAAC 499
+H + ML G V+ ++VT + A+ C
Sbjct: 729 THGTFDVLRQMLAGGEDVKADEVTILNAVPVC 760
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNS------IMYLYLKCGLVDEAQKLFDGMSHV 340
G + +G ++H L + + R+RN I+ +Y CG D+++ +FD +
Sbjct: 450 GKRKDIEMGRKIHQL-----VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICS 399
NL WNA+I+ ++ +++L E L F ++ +++ + PD +T+ ++ C+
Sbjct: 505 NLFQWNAVISSYS------RNELY-----DEVLETFIEMISTTDLLPDHFTYPCVIKACA 553
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
+ + G +H L +KTG + DV VG ALV+ Y G + A ++F M R L+SW S
Sbjct: 554 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 613
Query: 460 MITGFANHSLSHQALQLFEDMLL----AGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
MI F+++ S ++ L +M+ P+ T V L C+ + G
Sbjct: 614 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV---- 669
Query: 516 QKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ +K +D + L+DM+ + GCI A I KM+ N V W+ + G G
Sbjct: 670 -HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEG 727
Query: 572 NMELGFYAAEQLL 584
+ F Q+L
Sbjct: 728 DTHGTFDVLRQML 740
>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 874
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 370/714 (51%), Gaps = 41/714 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNR-KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L E + + VS+ C N L + +HA +++ G + F LV +Y K G
Sbjct: 177 MLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTF-TNNALVTMYAKLG 235
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ EA+ +FD ++VSW ++IS QN + E A+ ML++G P VTL + L
Sbjct: 236 RVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLP 295
Query: 184 ACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
ACS LE + GK+IHA+V+ +++ VG +L +Y C F+ + + +
Sbjct: 296 ACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIA 355
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W +I N + + F +M+ E G+ PN TL+S+ C S +HS
Sbjct: 356 VWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSC 415
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG------HAQM 355
+K G+ + V+N++M +Y + G ++ A+ +F M+ ++V+WN MI G H
Sbjct: 416 VVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDA 475
Query: 356 MDLAKDDLSAHNGGTE-ALSIFSKLNSS---GMKPDLYTFSSILTICSRLVALEQGEQIH 411
++L D G E ++ F + +KP+ T ++L C+ L AL +G++IH
Sbjct: 476 LNLLHD---MQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIH 532
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A +K DV VG+ALV+MY KCG + + VF +MS R +I+W +I + H
Sbjct: 533 AYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGE 592
Query: 472 QALQLFEDMLLAG-----VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
+AL+LF M+ G +RPN+VT++ A+ S++GMV E L F M+ ++ I+P D
Sbjct: 593 EALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSD 652
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY CL+D+ R G IEEA++ IK M +V WS + C+ H N+E+G AA+ L
Sbjct: 653 HYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFV 712
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P +LD +++ +E+ + + SWI D+V+ F D
Sbjct: 713 LDPN-------VLDYGTKQ------SMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDV 759
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNT 700
HPQS E+ + L+ L + K GY S L ++E+ HSE+LAIAFGLLNT
Sbjct: 760 SHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNT 819
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I V K+ +C DCH K I+ + REII+RD +R H F NG C+C D+
Sbjct: 820 SPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDY 873
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 223/446 (50%), Gaps = 26/446 (5%)
Query: 136 PRINVVSWTSLISGYVQNSQP-ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
PR+ W S + Q+S AI + +M+ AG P N L A + ++ + LG
Sbjct: 46 PRLPS-EWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLG 104
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+HA+V K+ T+V NSL ++Y CG +++A + F+ I ++ +SW ++I A
Sbjct: 105 KQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRF 164
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS-LRVGAQVHSLGIKLGYASNLRV 313
E + F ML E + P FTL S++ C +++ L +G QVH+ ++ G
Sbjct: 165 EEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTF-T 223
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ +Y K G V EA+ LFD +LV+WN +I+ LS ++ EAL
Sbjct: 224 NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISS-----------LSQNDRFEEAL 272
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL-KTGFLSDVVVGTALVNM 432
+ SG++P+ T +S+L CS L L G++IHA L + + VG ALV+M
Sbjct: 273 LYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDM 332
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQVT 491
Y C + E+ VF M RT+ W +MI G+ + ++A++LF +M+ G+ PN VT
Sbjct: 333 YCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVT 392
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIK 549
L AC + G + K K D Y+ L+DM+ R+G IE A
Sbjct: 393 LSSVLPACVRCESFLDKEGIHSCVVKWGFEK---DKYVQNALMDMYSRMGRIEIARSIFG 449
Query: 550 KMDFEPNEVIWSVFIAG---CRRHGN 572
M+ + V W+ I G C RH +
Sbjct: 450 SMN-RKDIVSWNTMITGYVVCGRHDD 474
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+A+S ++ + ++G+ PD + F ++L + + L G+Q+HA K G V +LV
Sbjct: 68 QAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLV 127
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
NMY KCG I+ A RVF E++ R +SW SMI A+ LF MLL V P
Sbjct: 128 NMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSF 187
Query: 491 TFVGALAACS---NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA--- 544
T V ACS N ++ + + F + +++ L+ M+ +LG + EA
Sbjct: 188 TLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFT----NNALVTMYAKLGRVYEAKTL 243
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
FD D V W+ I+ ++ E
Sbjct: 244 FDVFDDKDL----VSWNTIISSLSQNDRFE 269
>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/735 (30%), Positives = 377/735 (51%), Gaps = 55/735 (7%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
++L G + ++V++L C+ +H +VK G F+ L+ +Y KC
Sbjct: 185 FAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKC 244
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTA 181
G ++ ++F+ +P ++ SW ++IS V+ + + A F M L G + +L T
Sbjct: 245 GFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTL 304
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS---------------- 225
LTAC+ G+Q+HA +K E SV +SL Y+ CGS
Sbjct: 305 LTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDV 364
Query: 226 ---------------LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
L+SA++ FN++ ++N +S+ V+ N + + L F +ML E
Sbjct: 365 ITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEE 424
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G++ ++ TLTSI + CG + S +V Q+ +K G SN + +++ +Y +CG +++A
Sbjct: 425 GVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDA 484
Query: 331 QKLFDGMSHVNLVT--WNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSG-MKP 386
+K+F S N T +MI G+A+ NG EA+S+F S G +
Sbjct: 485 EKIFYQRSLENDYTAMLTSMICGYAR------------NGKLNEAISLFHSGQSEGAIVM 532
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D +SIL++C + E G+Q+H LK+G +++ VG A V+MY KC ++ A RVF
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA--GM 504
M+ + ++SW ++ G H +AL +++ M AG++P+ +TF ++A + +
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNL 652
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V F M+ E+ IKP ++HY I + R G +EEA I+ M EP+ +W +
Sbjct: 653 VDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE 624
CR + N L AA +L ++PKD SY + +++ ++GRW V+ RE+ +
Sbjct: 713 NSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRK 772
Query: 625 TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS 684
SWI ++K++SF D HPQ +I+ L+ L+ + GY SF L + E
Sbjct: 773 HPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQ 832
Query: 685 -----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
YHS KLA FG+L T PI +VK+ +C DCHNF+K ++ +T R+I++RD+
Sbjct: 833 KKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTS 892
Query: 740 RLHKFVNGHCTCRDF 754
H F++G C+C D+
Sbjct: 893 GFHWFIDGQCSCTDY 907
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 151/542 (27%), Positives = 270/542 (49%), Gaps = 45/542 (8%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +HA +K +D F+ L++ Y K G + +A KVF L NVVS+T+LISG+ +
Sbjct: 116 ARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
+ + A+ +F ML++G P T LTAC +LG Q+H VVK +
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM-LSEG 271
N+L LY CG L+ ++ F + E+++ SW TVI + + + + +F M L +G
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
++ + F+L+++ + C + G Q+H+L +K+G S+L V +S++ Y KCG ++
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT 353
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQ--MMDLAKD------------------DLSAHNGGTE 371
LF+ M +++TW MI + + M+D A + LS ++ G+
Sbjct: 354 DLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSR 413
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL +F ++ G++ T +SI+T C L + + +QI +K G LS+ + TALV+
Sbjct: 414 ALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVD 473
Query: 432 MYKKCGRIERASRVFVEMSTRTLIS--WTSMITGFANHSLSHQALQLFEDMLLAG-VRPN 488
MY +CGR+E A ++F + S + TSMI G+A + ++A+ LF G + +
Sbjct: 474 MYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMD 533
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-------CLIDMFVRLGCI 541
+V L+ C + G F M K+ + + + M+ + +
Sbjct: 534 EVMSTSILSLCGSIG--------FHEMGKQMHCHALKSGLITETGVGNATVSMYSKCWNM 585
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++A M+ + + V W+ +AG H G+ LG + + +KP D ++A+++
Sbjct: 586 DDAVRVFNTMNMQ-DIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKP-DSITFALIIS 643
Query: 600 IF 601
+
Sbjct: 644 AY 645
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 202/417 (48%), Gaps = 24/417 (5%)
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
L + +HA +K E+D +GN+L S Y G + A K F+ + NV+S+T +I
Sbjct: 115 LARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFS 172
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
++ + + F ML GI+PNE+T +I + C + ++G+QVH + +KLG S +
Sbjct: 173 KSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVF 232
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ N++M LY KCG +D +LF+ M ++ +WN +I + ++ K D EA
Sbjct: 233 ICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVI---SSLVKEFKYD--------EA 281
Query: 373 LSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
F + G+K D ++ S++LT C+ V +G+Q+HAL LK G S + V ++L+
Sbjct: 282 FDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIG 341
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG + +F M R +I+WT MIT + + A+++F M + N ++
Sbjct: 342 FYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKM----PKRNCIS 397
Query: 492 FVGALAACSNAGMVYEALGYF-EMMQKEYKIKP-VMDHYMCLIDMFVRLGCIEEAFDFIK 549
+ LA S AL F EM+++ +I + + + ++ F+
Sbjct: 398 YNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVM 457
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
K N I + + R G ME AE++ + + + AML + R
Sbjct: 458 KFGILSNSCIETALVDMYTRCGRME----DAEKIFYQRSLENDYTAMLTSMICGYAR 510
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 160/327 (48%), Gaps = 14/327 (4%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
K + +SY + L L+ N + R+L + + +L EG ++ + S++ C KS
Sbjct: 392 KRNCISYN---AVLAGLSRNDDGSRAL--ELFIEMLEEGVEISDCTLTSIITACGLLKSF 446
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF--DNLPRINVVSWTSLIS 148
++ I ++K G + + T LV++Y +CG ME+A+K+F +L TS+I
Sbjct: 447 KVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMIC 506
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTE 207
GY +N + AI +F G + + T+ L+ C S+ +GKQ+H + +K
Sbjct: 507 GYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCHALKSGLI 566
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
+T VGN+ S+YS C +++ A++ FN + ++++SW ++ + + + L + KM
Sbjct: 567 TETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR----NSIMYLYLK 323
GI+P+ T I S L + SL + + N++ S + + +
Sbjct: 627 EKAGIKPDSITFALIISAY-KHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGR 685
Query: 324 CGLVDEAQKLFDGMS-HVNLVTWNAMI 349
GL++EA++ M ++ W A++
Sbjct: 686 WGLLEEAEQTIRNMPLEPDVYVWRALL 712
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 328/604 (54%), Gaps = 11/604 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+ V+ TS +L+ C +++ E +HA+ VKT +V + L+++Y +
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G ++++ +VF +P N V+WT++I+G V + + + F +M + T A
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC+ L ++ GK IH +V+ V NSL ++Y+ CG + + F + E++V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT++I A G+ V+ + F KM + + PNE T S+ S C ++ L G Q+H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+ LG +L V NS+M +Y CG + A LF GM ++++W+ +I G+ Q
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA------ 389
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
G E FS + SG KP + +S+L++ + +E G Q+HAL L G
Sbjct: 390 -----GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ 444
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ V ++L+NMY KCG I+ AS +F E ++S T+MI G+A H S +A+ LFE L
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G RP+ VTF+ L AC+++G + YF MMQ+ Y ++P +HY C++D+ R G +
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+A I +M ++ ++V+W+ + C+ G++E G AAE++L+L P + L +I+
Sbjct: 565 SDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY 624
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S G E+ A V+ + + + + WS I+IKD V +F D HPQS +I+ +L+ V
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAV 684
Query: 662 EKAK 665
A+
Sbjct: 685 SGAE 688
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 244/552 (44%), Gaps = 66/552 (11%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYV--QNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
GN+ A++VFD +P ++VSWTS+I YV NS L + + +++ P L
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L AC +I G+ +HAY VK VG+SL +Y G ++ + + F+ + +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
++WT +I G +GL +FS+M + +T C + ++ G +H+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
I G+ + L V NS+ +Y +CG + + LF+ MS ++V+W ++I + ++ K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
A+ F K+ +S + P+ TF+S+ + C+ L L GEQ+H L G
Sbjct: 294 -----------AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ V +++ MY CG + AS +F M R +ISW+++I G+ + + F M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 481 LLAGVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
+G +P L+ N G AL +++ ++ LI+M+
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS------SLINMY 456
Query: 536 VRLGCIEEA----------------------------------FDFIKKMDFEPNEVIWS 561
+ G I+EA F+ K+ F P+ V +
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 562 VFIAGCRRHGNMELGFY---AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+ C G ++LGF+ ++ ++P E Y ++D+ AGR D + N
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAK-EHYGCMVDLLCRAGRLSDAEKMIN--- 572
Query: 619 EEKLSETDDWSW 630
E + DD W
Sbjct: 573 -EMSWKKDDVVW 583
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 146/302 (48%), Gaps = 30/302 (9%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS + + G + A+++FD M H ++V+W ++I K ++A+N EAL
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSII----------KRYVTANN-SDEALI 92
Query: 375 IFSKLN--SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+FS + + PD S +L C + + GE +HA +KT LS V VG++L++M
Sbjct: 93 LFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM 152
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
YK+ G+I+++ RVF EM R ++WT++ITG + + L F +M + + TF
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFI 548
AL AC AG+ + Y + + ++ + +C L M+ G +++
Sbjct: 213 AIALKAC--AGL--RQVKYGKAIHTHVIVRGFVTT-LCVANSLATMYTECGEMQDGLCLF 267
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK----PKDCESYAMLLDIFVSA 604
+ M E + V W+ I +R G A E +K++ P + +++A + S
Sbjct: 268 ENMS-ERDVVSWTSLIVAYKRIGQ---EVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 605 GR 606
R
Sbjct: 324 SR 325
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 6/215 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF+ + G K + SLL N + +HA + G Q+ V + L+N
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG+++EA +F R ++VS T++I+GY ++ + + AI +F L+ G P +VT
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG---NSLCSLYSTCGSLNSAIKAFN 234
+ LTAC+ + LG H + + +T + + L G L+ A K N
Sbjct: 515 FISVLTACTHSGQLDLG--FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+ +K+ + WTT++ AC G+ +G R ++L
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/618 (34%), Positives = 328/618 (53%), Gaps = 58/618 (9%)
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC--GSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQ+HA ++ D V +L Y+ +LN A+K F + NV + +I C
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCL 106
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+N E + + + KM+ +PN+FT ++ C + G QVH+ IK G + ++
Sbjct: 107 QNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVH 166
Query: 313 VR-------------------------------NSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+R N+++ YLKCG V+ A++LF M N
Sbjct: 167 IRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKN 226
Query: 342 LVTWNAMIAGHAQ--MMDLAKD---DLSAHN-------------GG--TEALSIFSKLNS 381
+ +WN M++G A+ M++ A++ ++ N GG EAL +F+ +
Sbjct: 227 VGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQR 286
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
++P + SS+L C+ L AL+QG IHA D V+GTALV+MY KCGR++
Sbjct: 287 EEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDM 346
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A VF +M + + +W +MI G H + A++LF M RPN +T +G L+AC++
Sbjct: 347 AWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAH 406
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
+GMV E L F M++ Y I+P M+HY C++D+ R G + EA + + M EP+ +W
Sbjct: 407 SGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWG 466
Query: 562 VFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEK 621
+ CR+HG++ELG + LL+L+P++ YA+L +I+ AGRW+DVA V+ L +E
Sbjct: 467 ALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERG 526
Query: 622 LSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE 681
+ + S I V+ FK DG HPQ I+ +L ++++ K G+ S L D E
Sbjct: 527 VKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIE 586
Query: 682 SASV-----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVR 736
YHSEKLAIAFGL+NT + I VVK+ MC DCH+ K+I+ + REIIVR
Sbjct: 587 EEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVR 646
Query: 737 DSKRLHKFVNGHCTCRDF 754
D R H F G C+C+DF
Sbjct: 647 DRARYHHFKTGTCSCKDF 664
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 164/386 (42%), Gaps = 75/386 (19%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC--GNMEEAQKVFDNLPRINVVSWTSL 146
SL + + +HA ++TG QD +V LV Y N+ A KVF+ +P NV + +
Sbjct: 42 SLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNII 101
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
I G +QN++P AI + M+ A P T T AC++ E+ G Q+HA+V+K
Sbjct: 102 IKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGL 161
Query: 207 EDDTSV------------------------GNS-------LCSLYSTCGSLNSAIKAFNR 235
D + GNS + Y CG + +A + F
Sbjct: 162 SGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWS 221
Query: 236 IREKNVMSWTTVIGA---CG----------------------------ENGEAVQGLRFF 264
+ +KNV SW ++ CG + G + L F
Sbjct: 222 MEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF 281
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+ M E I+P +F L+S+ + C + +L G +H+ + + + +++ +Y KC
Sbjct: 282 NVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKC 341
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
G +D A +F+ M + TWNAMI G L H +A+ +F K+
Sbjct: 342 GRLDMAWDVFEKMEKKEVFTWNAMICG-----------LGMHGRAEDAIELFFKMQKQKF 390
Query: 385 KPDLYTFSSILTICSRLVALEQGEQI 410
+P+ T +L+ C+ +++G +I
Sbjct: 391 RPNGITLLGVLSACAHSGMVDEGLRI 416
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 67/398 (16%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+V+ KCG +EEA+++F+ + N +SW+++I GY++ + A+ VF M P
Sbjct: 233 MVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPR 292
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L + L AC++L ++ G+ IHAYV D +G +L +Y+ CG L+ A F
Sbjct: 293 KFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFE 352
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ +K V +W +I G +G A + F KM + +PN TL + S C
Sbjct: 353 KMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSAC-------- 404
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
HS + G LR+ NS+ +E + GM H V + G A
Sbjct: 405 ---AHSGMVDEG----LRIFNSM----------EEVYGIEPGMEHYGCVV---DLLGRAG 444
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ A++ + S M+P + ++L C + +E GE++ +
Sbjct: 445 LLGEAEE----------------VMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKIL 488
Query: 415 LKTGFLSDVVVG--TALVNMYKKCGRIERASRVFVEMSTR--------TLISWTSMITGF 464
L+ L G L N+Y + GR + + V M R ++I + ++ F
Sbjct: 489 LE---LEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEF 545
Query: 465 ANHSLSHQALQ----LFEDML----LAGVRPN--QVTF 492
SH ++ + ++M+ + G PN QV F
Sbjct: 546 KMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLF 583
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 59 FQEALSVLT--EGPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL V + +++ +V S+L C N +L IHA++ + D + T
Sbjct: 274 YKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTA 333
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCG ++ A VF+ + + V +W ++I G + + E AI +F M + P
Sbjct: 334 LVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPN 393
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKA- 232
+TL L+AC+ + G +I + + Y E + L G L A +
Sbjct: 394 GITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVM 453
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLR 262
++ E + W ++GAC ++G+ G R
Sbjct: 454 YSMPMEPSAAVWGALLGACRKHGDVELGER 483
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK--CGRIERASRVFVEMSTRTLISWTSM 460
+L +Q+HA+ L+TG D V LV Y + A +VF + + + +
Sbjct: 42 SLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNII 101
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS-------------------- 500
I G ++ +A+ + M++A RPN+ T+ AC+
Sbjct: 102 IKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGL 161
Query: 501 -------NAGM-VYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKK 550
+AG+ +Y + G E ++ D + +ID +++ G +E A +
Sbjct: 162 SGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWS 221
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M+ + N W+V ++G + G +E A E ++K K+ S++ ++D ++ G +++
Sbjct: 222 ME-DKNVGSWNVMVSGMAKCGMIE---EARELFNEMKEKNEISWSAMIDGYIKGGYYKEA 277
Query: 611 AVVKNLTREEKL 622
V N+ + E++
Sbjct: 278 LEVFNVMQREEI 289
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 329/604 (54%), Gaps = 11/604 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+ V+ TS +L+ C +++ E +HA+ VKT FV + L+++Y +
Sbjct: 90 AMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKR 149
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G +E++ +VF +P N V+WT++I+G V + + + F +M + T A
Sbjct: 150 VGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIA 209
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC+ L ++ GKQIH +V+ + V NSL ++Y+ CG + + F + E++V
Sbjct: 210 LKACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDV 269
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT++I A G + + F KM + + PNE T ++ S C ++ L G Q+H
Sbjct: 270 VSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCN 329
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
LG +L V NS+M +Y CG +D A LF GM ++++W+ +I G++Q
Sbjct: 330 VFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQA------ 383
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
G EA FS + SG KP + +S+L++ + LE G Q+HAL G
Sbjct: 384 -----GFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQ 438
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ V + L+NMY KCG I+ AS++F E ++S T+MI G+A H S +A+ LFE L
Sbjct: 439 NSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 498
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G P+ VTF+ L AC+++G + YF +MQ++Y ++P +HY C++D+ R G +
Sbjct: 499 KVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRL 558
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA I +M ++ ++V+W+ + C+ G++E G AAE++L+L P + L +I+
Sbjct: 559 SEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY 618
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S G E+ A V+ + + + + WS I+IKD V +F D HP S +I+ +L+ +V
Sbjct: 619 SSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPLSEDIYNILELVV 678
Query: 662 EKAK 665
A+
Sbjct: 679 SGAE 682
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/567 (25%), Positives = 261/567 (46%), Gaps = 75/567 (13%)
Query: 111 VMTFLVNVYGK----CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF--L 164
V+TF N + + GN+ A++VFD +P ++VSWT++I GYV + + A+ +F +
Sbjct: 32 VVTFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAM 91
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
+++ P + L AC +I G+ +HAY VK VG+SL +Y G
Sbjct: 92 RVVDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVG 151
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ + + F+ + +N ++WT +I G +GL +FS+M S + FT
Sbjct: 152 KIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALK 211
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C + ++ G Q+H+ I G+ + + V NS+ +Y +CG + + LF+ MS ++V+
Sbjct: 212 ACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVS 271
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
W ++I + ++ H +A+ F K+ +S + P+ TF+++ + C+ L L
Sbjct: 272 WTSLIVAYNRI---------GHE--EKAVETFIKMRNSQVPPNEQTFATMFSACASLSRL 320
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
GEQ+H G + V +++ MY CG+++ AS +F M R +ISW+++I G+
Sbjct: 321 VWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGY 380
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTF------------------VGALAAC------- 499
+ +A + F M +G +P V ALA C
Sbjct: 381 SQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGLEQNS 440
Query: 500 ----------SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
S G + EA FE ++ + +I+ + G +EA D +
Sbjct: 441 TVRSTLINMYSKCGNIKEASKIFEETDRDDIVS-----LTAMINGYAEHGKSKEAIDLFE 495
Query: 550 ---KMDFEPNEVIWSVFIAGCRRHGNMELGFY---AAEQLLKLKPKDCESYAMLLDIFVS 603
K+ F P+ V + + C G ++LGF+ ++ ++P E Y ++D+
Sbjct: 496 KSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAK-EHYGCMVDLLCR 554
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSW 630
AGR L+ EK+ D+ SW
Sbjct: 555 AGR---------LSEAEKM--IDEMSW 570
>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
Length = 899
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 227/696 (32%), Positives = 356/696 (51%), Gaps = 38/696 (5%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ +++VS++ C N L + H I++TG FV LVN+YGKCG+++ A+
Sbjct: 225 RPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDRARL 284
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF+ + NVVSWT +I Y Q A ++ M P VT + +C E
Sbjct: 285 VFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLRPED 341
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK--NVMSWTTVI 248
+ +QIHA++V + D + L ++Y CGS++SA F ++E+ N ++W +I
Sbjct: 342 LPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENLKERSNNAVTWNAMI 401
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
++GE+ Q L F KM EG++PN T + C ++ L G Q+H+ I L
Sbjct: 402 SGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLHAR-ILLENI 460
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ N+++ +Y KCG +DEA F M ++V+WN MIA +AQ H
Sbjct: 461 HEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQ-----------HGS 509
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL--TLKTGFLSDVVVG 426
G +AL F +++ G D T+ + C + +L G+ IH++ T D V
Sbjct: 510 GRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVA 569
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TALV MY +CG + A VF +R L++W+++I A H ++AL LF +M L G +
Sbjct: 570 TALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTK 629
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ +TF +AACS G+V + + YF M ++Y I DH+ ++D+ R G +EEA
Sbjct: 630 PDALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQ 689
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY----AMLLDIFV 602
++K P + +V + C HG++E G A+ L+L K+ S+ AML +++
Sbjct: 690 VMRK---NPCALAHAVLLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYG 746
Query: 603 SAGRWEDVA-VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+AGRWED A V K + E SWI +K++V+ F +D Q + K+ EL
Sbjct: 747 AAGRWEDAARVRKAVESRNARREPGGRSWIEVKNRVHEFGEDDD-RLQGPRLDKIRGELQ 805
Query: 662 EKAKCFGYKQQESFELTDEESASVY-----HSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
E + +E+A + HSEK+AI FG+++TP I +VK+ C
Sbjct: 806 R----LSSLAVEEGGICKDENARAHILGCCHSEKVAIGFGIVSTPAGQLIRIVKNLRACH 861
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKF-VNGHCTC 751
DCH F K ++ REI VRD LH F NG C+C
Sbjct: 862 DCHAFAKFVSRRIQREISVRDPYGLHCFQTNGSCSC 897
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 170/506 (33%), Positives = 271/506 (53%), Gaps = 25/506 (4%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+Q + Y SLLQ+C +KS + +++H HI+ +G + ++ L+ +Y KCG +E+A +V
Sbjct: 24 LQPARYASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEV 83
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F+ LP NV SWT+LI+ Y + + +F M G P T LTACSS ++
Sbjct: 84 FELLPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGAL 143
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK IH V E VGN++ +LY CG ++ A F R+ E+N++SW +I A
Sbjct: 144 NEGKAIHDCAVLAGMETQV-VGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAAN 202
Query: 252 GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG ++ F M +G ++PN+ T S+ C +L L G H I+ G+ S
Sbjct: 203 AQNGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSY 262
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
L V NS++ +Y KCG VD A+ +F+ MS N+V+W MI +AQ +
Sbjct: 263 LFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFI-----------R 311
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
A ++ +++ +P+ TF +++ C R L + EQIHA + +GF SD V+ LV
Sbjct: 312 AAFDLYKRMDC---EPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLV 368
Query: 431 NMYKKCGRIERASRVFVEMSTRT--LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
MY KCG ++ A +F + R+ ++W +MI+G A H S QAL+ F M L GVRPN
Sbjct: 369 TMYGKCGSVDSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPN 428
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFD 546
VT++ +L ACS+ L + ++ + + + +I+M+ + G ++EA D
Sbjct: 429 SVTYLASLEACSS----LNDLTRGRQLHARILLENIHEANLSNAVINMYGKCGSLDEAMD 484
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGN 572
KM E + V W+ IA +HG+
Sbjct: 485 EFAKMP-ERDVVSWNTMIATYAQHGS 509
>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
Length = 829
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/704 (30%), Positives = 371/704 (52%), Gaps = 31/704 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + ++++ L C + +SL + IH +V + D V L+N+Y KCG++
Sbjct: 139 DGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSH 198
Query: 128 AQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A++VF + R NV+SW+ + + + A+ F ML G T + T L+ACS
Sbjct: 199 AKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACS 258
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSW 244
S ++ G+ IH+ + E + V N++ ++Y CG++ A K F+ + E ++V+SW
Sbjct: 259 SPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSW 318
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++ A N ++ + +M ++ ++ T S+ S C + + +G +H +
Sbjct: 319 NIMLSAYVHNDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVN 375
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
N+ V N+++ +Y KCG EA+ +FD M ++++W +I+ + + +A
Sbjct: 376 DELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVA----- 430
Query: 365 AHNGGTEALSIFSKL-------NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
EA +F ++ +S +KPD F +IL C+ + ALEQG+ +
Sbjct: 431 ------EACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASC 484
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQL 476
G SD VGTA+VN+Y KCG IE R+F + +R + W +MI +A SH+AL+L
Sbjct: 485 GLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKL 544
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK-IKPVMDHYMCLIDMF 535
F M + GVRP+ +FV L ACS+ G+ + YF M EY+ + + H+ C+ D+
Sbjct: 545 FWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLL 604
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G ++EA +F++K+ +P+ V W+ +A CR H +++ A +LL+L+P+ Y
Sbjct: 605 GRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYV 664
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
L +I+ +W VA V+ E+ + + S I I ++ F D HP++ EI +
Sbjct: 665 ALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIRE 724
Query: 656 VLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
L +L + K GY L ++E HSE+LAIA GL++TP+ +P+ V K
Sbjct: 725 ELAKLHSQMKECGYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTK 784
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH K+I+ + R+I+VRD R H F +G C+C+D+
Sbjct: 785 NLRVCSDCHTATKLISKIAGRKIVVRDPTRFHLFKDGKCSCQDY 828
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/558 (28%), Positives = 274/558 (49%), Gaps = 48/558 (8%)
Query: 22 SSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLL 81
SSS LK HT S RS L+ + VR+ + ++Y LL
Sbjct: 7 SSSSRGLKRCLHTASLDRSDIASAVLDLEKQAVRA----------------ENATYARLL 50
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVM-TFLVNVYGKCGNMEEAQKVFDNLPRINV 140
Q C ++L IH+ VK ++ +V++Y C + +A+ FD L + N+
Sbjct: 51 QRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDALEQRNL 110
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
SWT L++ + + Q + + M + G P VT TAL +C ES+R G +IH
Sbjct: 111 YSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQM 170
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTTVIGACGENGEAVQ 259
VV + E D V N+L ++Y CGSL+ A + F ++ R +NV+SW+ + GA +G +
Sbjct: 171 VVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWE 230
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
LR F ML GI+ + + +I S C + ++ G +HS G+ S L V N++M
Sbjct: 231 ALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMT 290
Query: 320 LYLKCGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+Y +CG V+EA+K+FD M ++V+WN M++ + ++ G +A+ ++
Sbjct: 291 MYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVH-----------NDRGKDAIQLYQ 339
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
++ ++ D T+ S+L+ CS + G +H + +V+VG ALV+MY KCG
Sbjct: 340 RMQ---LRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCG 396
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML-------LAGVRPNQV 490
A VF +M R++ISWT++I+ + L +A LF+ ML V+P+ +
Sbjct: 397 SHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 456
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY---MCLIDMFVRLGCIEEAFDF 547
FV L AC++ AL +M+ ++ + +++++ + G IEE
Sbjct: 457 AFVTILNACADVS----ALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRI 512
Query: 548 IKKMDFEPNEVIWSVFIA 565
+ P+ +W+ IA
Sbjct: 513 FDGVCSRPDVQLWNAMIA 530
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 219/431 (50%), Gaps = 26/431 (6%)
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYST 222
LD+ + N T L C+ +++ G++IH+ VK+ + +GN + S+Y+
Sbjct: 32 LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
C S A AF+ + ++N+ SWT ++ A +G++ + LR +M +G++P+ T +
Sbjct: 92 CDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITA 151
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-N 341
CG SLR G ++H + + + +V N+++ +Y KCG + A+++F M N
Sbjct: 152 LGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRN 211
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
+++W+ M HA H EAL F + G+K +IL+ CS
Sbjct: 212 VISWSIMAGAHA-----------LHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSP 260
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM--STRTLISWTS 459
++ G IH+ +GF S+++V A++ MY +CG +E A +VF M + R ++SW
Sbjct: 261 ALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNI 320
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
M++ + ++ A+QL++ M L R ++VT+V L+ACS+A E +G ++ K+
Sbjct: 321 MLSAYVHNDRGKDAIQLYQRMQL---RADKVTYVSLLSACSSA----EDVGLGRVLHKQI 373
Query: 520 KIKPVMDHYM---CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ + + L+ M+ + G EA KM+ + + + W+ I+ R +
Sbjct: 374 VNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISAYVRRRLVAEA 432
Query: 577 FYAAEQLLKLK 587
+ +Q+L+L+
Sbjct: 433 CHLFQQMLELE 443
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 342/604 (56%), Gaps = 16/604 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + +Y S+L+ C ++IH +VKTG D V + LV +Y KC E+A
Sbjct: 103 KPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIW 162
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F+ +P +V W ++IS Y Q+ + A+ F M G P +VT+ TA+++C+ L
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ G +IH ++ D+ + ++L +Y CG L AI+ F ++ +K V++W ++I
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISG 282
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G G+++ ++ F +M +EG++P TL+S+ VC L G VH I+ S+
Sbjct: 283 YGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSD 342
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + +S+M LY KCG V+ A+ +F + +V+WN MI+G+ A
Sbjct: 343 VFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYV-----------AEGKLF 391
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL +FS++ S ++PD TF+S+LT CS+L ALE+GE+IH L ++ ++ VV AL+
Sbjct: 392 EALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALL 451
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG ++ A VF + R L+SWTSMIT + +H ++ AL+LF +ML + ++P++V
Sbjct: 452 DMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRV 511
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF+ L+AC +AG+V E YF M Y I P ++HY CLID+ R G + EA++ +++
Sbjct: 512 TFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571
Query: 551 MDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++V + S + CR H N++LG A L+ P D +Y +L +++ SA +W++
Sbjct: 572 NPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDE 631
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL----DELVEKAK 665
V VV++ +E L + SWI I K+ F D H +FK L D + +++K
Sbjct: 632 VRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDESK 691
Query: 666 CFGY 669
F Y
Sbjct: 692 PFTY 695
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 283/576 (49%), Gaps = 56/576 (9%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ T + LL+ C+N KSL ++IH +V G D F+ L+N+Y C + A+ V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60
Query: 132 FDNLPRINVVS-WTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLE 189
FDN+ +S W L++GY +N A+ +F +L P + T + L AC L
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
LGK IH +VK D VG+SL +Y+ C + AI FN + EK+V W TVI
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
++G + L +F M G +PN T+T+ S C +L L G ++H I G+
Sbjct: 181 CYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ + ++++ +Y KCG ++ A ++F+ M +V WN+MI+G+ L D +S
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYG----LKGDSIS----- 291
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+ +F ++ + G+KP L T SS++ +CSR L +G+ +H T++ SDV + ++L
Sbjct: 292 --CIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSL 349
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y KCG++E A +F + ++SW MI+G+ +AL LF +M + V P+
Sbjct: 350 MDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDA 409
Query: 490 VTFVGALAACSNAGMVY--EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+TF L ACS + E + + +K + VM L+DM+ + G ++EAF
Sbjct: 410 ITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMG---ALLDMYAKCGAVDEAFSV 466
Query: 548 IK----------------------------------KMDFEPNEVIWSVFIAGCRRHGNM 573
K + + +P+ V + ++ C G +
Sbjct: 467 FKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLV 526
Query: 574 ELGFYAAEQLLKLK---PKDCESYAMLLDIFVSAGR 606
+ G Y Q++ + P+ E Y+ L+D+ AGR
Sbjct: 527 DEGCYYFNQMVNVYGIIPR-VEHYSCLIDLLGRAGR 561
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 196/397 (49%), Gaps = 16/397 (4%)
Query: 55 RSLGFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+S F+EAL G + + + + + C L+ IH ++ +G D F
Sbjct: 184 QSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF 243
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+ + LV++YGKCG++E A +VF+ +P+ VV+W S+ISGY I +F M G
Sbjct: 244 ISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEG 303
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
PT TL + + CS + GK +H Y ++ + + D + +SL LY CG + A
Sbjct: 304 VKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAE 363
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F I + V+SW +I G+ + L FS+M ++P+ T TS+ + C +
Sbjct: 364 NIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLA 423
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+L G ++H+L I+ +N V +++ +Y KCG VDEA +F + +LV+W +MI
Sbjct: 424 ALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQ 409
+ +H AL +F+++ S MKPD TF +IL+ C +++G
Sbjct: 484 AYG-----------SHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYY 532
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ + G + V + L+++ + GR+ A +
Sbjct: 533 FNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEIL 569
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 220/449 (48%), Gaps = 18/449 (4%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC + +S++ GK IH VV ++D + +L +LY +C + A F+ +
Sbjct: 10 LRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCE 69
Query: 242 MS-WTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+S W ++ +N V+ L F K+L ++P+ +T S+ CG + +G +H
Sbjct: 70 ISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIH 129
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ +K G ++ V +S++ +Y KC ++A LF+ M ++ WN +I+ + Q +
Sbjct: 130 TCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF- 188
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
EAL F + G +P+ T ++ ++ C+RL+ L +G +IH + +GF
Sbjct: 189 ----------KEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
L D + +ALV+MY KCG +E A VF +M +T+++W SMI+G+ S +QLF+
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKR 298
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M GV+P T + CS + + E + +I+ + L+D++ + G
Sbjct: 299 MYNEGVKPTLTTLSSLIMVCSRSARLLEG-KFVHGYTIRNRIQSDVFINSSLMDLYFKCG 357
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM--ELGFYAAEQLLKLKPKDCESYAML 597
+E A + K + + V W+V I+G G + LG ++ + ++P D ++ +
Sbjct: 358 KVELAENIFKLIP-KSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEP-DAITFTSV 415
Query: 598 LDIFVSAGRWEDVAVVKNLTREEKLSETD 626
L E + NL E+KL +
Sbjct: 416 LTACSQLAALEKGEEIHNLIIEKKLDNNE 444
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 311/570 (54%), Gaps = 17/570 (2%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC--GNMEEAQK 130
+ S+ LL C SL + IHA +V G Q+ + T L+ + C M+ A+K
Sbjct: 28 HSRSFNYLLNCC---SSLPDLSRIHALVVTNGCGQNLLLSTKLI-ITACCLAPTMDYARK 83
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P+ +V W +LI GY E A+ ++ +M AG +P N T + +C+ L +
Sbjct: 84 MFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSA 143
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+R GK++H +VK+ + D V +SL ++YS G F + +N++SWT VI
Sbjct: 144 LREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAG 203
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+N +GL F +M+ G QPN TL S+ C + L +G +H GIKLG +
Sbjct: 204 YVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPD 263
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + N+++ LY KCG V+ A+ LFDGM NLV+WNAMIA + Q +N G
Sbjct: 264 VSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQ-----------NNAGA 312
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
A+ +F ++ + + D T S+++ C+ L AL G +H L + G +V + AL+
Sbjct: 313 NAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALI 372
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG I+ A VF + R+++SWTSMI A+H AL+LF M GV+PN
Sbjct: 373 DMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSF 432
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TF AC ++G+V E +FE M ++Y I P ++H C++D+ R G + EA++FI K
Sbjct: 433 TFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDK 492
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M EP+ +W + CR H N+EL AE+L L P+ Y ++ +I+ AGRWED
Sbjct: 493 MPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDA 552
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
A ++ L E +L + S + + + ++F
Sbjct: 553 ARLRKLMEERELKKIPGHSLVEVNRRFHTF 582
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 196/405 (48%), Gaps = 59/405 (14%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F+E L V E G + + VS+L C + L+ ++IH + +K G D +
Sbjct: 210 FKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNA 269
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +YGKCGN+E A+ +FD + N+VSW ++I+ Y QN+ A+ +F M
Sbjct: 270 LIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFD 329
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T+ + ++AC+SL ++ G+ +H V + E + S+ N+L +Y+ CG+++ A + F
Sbjct: 330 YITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFE 389
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
R+ ++V+SWT++IGAC +G L+ FS+M EG++PN FT ++ + C
Sbjct: 390 RLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTAC-------- 441
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM--IAGH 352
R+S GLV+E +K F+ M + ++ M +
Sbjct: 442 -------------------RHS--------GLVEEGRKHFESM----MRDYSIMPGVEHC 470
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
A M+DL L EA K+ ++PD+ + ++L C LE E
Sbjct: 471 ACMVDL----LGRAGSLMEAYEFIDKMP---VEPDVSVWGALLGSCRIHSNLELAE---- 519
Query: 413 LTLKTGFLSD---VVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
L + FL D V + N+Y + GR E A+R+ M R L
Sbjct: 520 LVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 564
>gi|222632633|gb|EEE64765.1| hypothetical protein OsJ_19621 [Oryza sativa Japonica Group]
Length = 656
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 352/671 (52%), Gaps = 53/671 (7%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
LS + +HA +V+ D L+ +Y KCG + A++VFD +P N VS L+SG
Sbjct: 32 LSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMSG 90
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
Y + + A L +L ++ N L +A+ A + + S +G+Q H Y +K +
Sbjct: 91 YASSGRHRDA----LALLRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAE 146
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V +++ +Y C ++ A+K + EK +G+C
Sbjct: 147 HPYVCSAVLHMYCQCAHMDEAVKYSKKHGEK-----CRAMGSC----------------- 184
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+ + C + + +G+QVH+ +K N+ V ++++ +Y KC
Sbjct: 185 ---------VICRVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPH 235
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
EA ++F+ + N+V+W A++ + Q +L +D AL +F + G++P+
Sbjct: 236 EANRVFEVLPEKNIVSWTAIMTAYTQN-ELFED----------ALQLFLDMEMEGVRPNE 284
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+T++ L C+ L L+ G + A T+KTG + V AL+NMY K G +E A RVF+
Sbjct: 285 FTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLS 344
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
M R ++SW S+I G+A+H + +A++ F DML A P+ VTF+G L+AC+ G+V E
Sbjct: 345 MPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEG 404
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
Y +M KE +KP +HY C++ + R+G ++EA FI+ + V W ++ C+
Sbjct: 405 FYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQ 464
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ N LG AEQ+ +LKPKD +Y +L +++ A RW+ V V+ L RE + +
Sbjct: 465 VYRNYGLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGV 524
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
SWI++ +V+ F D HP +I K L EL++K K GY + L D +E
Sbjct: 525 SWIQVGSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEH 584
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
+YHSEKLA+AFGL+ TP I ++K+ +C DCH IK+I+ T R I+VRD+ R H
Sbjct: 585 LMYHSEKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHC 644
Query: 744 FVNGHCTCRDF 754
+G C+C D+
Sbjct: 645 IEDGVCSCDDY 655
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 2/273 (0%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L C + K + +H +K + +V + LV++YGKC EA +VF+ LP N
Sbjct: 189 VLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPHEANRVFEVLPEKN 248
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+VSWT++++ Y QN E A+ +FLDM G P T AL +C+ L +++ G + A
Sbjct: 249 IVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGA 308
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+K V N+L ++YS GS+ A + F + ++V+SW ++I +G A +
Sbjct: 309 CTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRARE 368
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIM 318
+ F ML P+ T + S C + + G ++ +K +G ++
Sbjct: 369 AMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMV 428
Query: 319 YLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
L + G +DEA++ + ++V W ++++
Sbjct: 429 GLLCRVGRLDEAERFIESNCIGTDVVAWRSLLS 461
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 22/207 (10%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F++AL + EG + +Y L C +L N + A +KTG V
Sbjct: 265 FEDALQLFLDMEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNA 324
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+N+Y K G++E+A++VF ++P +VVSW S+I GY + + A+ F DML A P+
Sbjct: 325 LMNMYSKSGSVEDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPS 384
Query: 175 NVTLGTALTACSSLESIR-----LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
VT L+AC+ L + L + VK E T + LC + G L+ A
Sbjct: 385 YVTFIGVLSACAQLGLVDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRV----GRLDEA 440
Query: 230 IKAFNRIREKN-----VMSWTTVIGAC 251
R E N V++W +++ +C
Sbjct: 441 ----ERFIESNCIGTDVVAWRSLLSSC 463
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/519 (36%), Positives = 293/519 (56%), Gaps = 18/519 (3%)
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW ++I C G L FF KM S ++ +E+TL S+ + +M ++ VH L
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK G+ + V N+++ +Y K G +D A +F M ++V+W +++ G++
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYS-------- 118
Query: 362 DLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
HNG EA+ +F K+ SG+ PD +S+L+ C+ L ++ G+QIHA +K+G
Sbjct: 119 ----HNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLE 174
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
S + V +LV MY KCG I A+R F M TR +ISWT++I G+A + +LQ ++ M
Sbjct: 175 SSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQM 234
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+ G +P+ +TF+G L ACS+ G++ YFE M K Y IKP +HY C+ID+ R G
Sbjct: 235 IATGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGK 294
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ EA + +M P+ V+W +A CR H +ELG AA+ L +L+P + Y ML ++
Sbjct: 295 LAEAKGLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNM 354
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ +AG+WED A ++ L R + + +SWI KV +F D HP EI+ +DE+
Sbjct: 355 YSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEI 414
Query: 661 VEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
+ K GY SF L D +E YHSEKLA+AFGLL P +PI + K+ +C
Sbjct: 415 IMLIKEAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVC 474
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH +K + + AR II+RDS H F G C+C D+
Sbjct: 475 GDCHTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDY 513
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/452 (27%), Positives = 203/452 (44%), Gaps = 66/452 (14%)
Query: 58 GFQE-ALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF+E ALS + K+ + S+L + K + NA +H I+KTG V
Sbjct: 20 GFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVN 79
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+++Y K G ++ A VF + +VVSWTSL++GY N E AI +F M +G Y
Sbjct: 80 NALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGVY 139
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P + + + L+AC+ L + G+QIHA +VK E SV NSL ++Y+ CGS+ A +A
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ + ++V+SWT +I +NG L+F+ +M++ G +P+ T + C
Sbjct: 200 FDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACS----- 254
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
H+ GL+ + F+ M V + +
Sbjct: 255 ------HN------------------------GLLGSGRAYFEAMDKVYGIKPGP--EHY 282
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
A M+DL L EA + LN + PD + ++L C LE GE
Sbjct: 283 ACMIDL----LGRSGKLAEAKGL---LNQMVVAPDAVVWKALLAACRVHKELELGEMAAK 335
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISW---TSMITGF 464
+ ++ + L NMY G+ E A+R+ M +R + SW S ++ F
Sbjct: 336 NLFELEPMNSMPY-VMLSNMYSAAGKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTF 394
Query: 465 A----NHSLSHQALQLFEDMLL----AGVRPN 488
NH L ++ +++++ AG P+
Sbjct: 395 MSEDRNHPLRNEIYSKIDEIIMLIKEAGYVPD 426
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 138/260 (53%), Gaps = 13/260 (5%)
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSW SLI G V+ E A+ F M TL + L + +S++ ++ +H
Sbjct: 7 VSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCL 66
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
++K E V N+L +Y+ G L+ AI F+++ +K+V+SWT+++ NG +
Sbjct: 67 IIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEA 126
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
++ F KM G+ P++ + S+ S C + + G Q+H+ +K G S+L V NS++ +
Sbjct: 127 IKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTM 186
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKL 379
Y KCG + +A + FD M ++++W A+I G+AQ NG G +L + ++
Sbjct: 187 YAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQ------------NGRGKHSLQFYDQM 234
Query: 380 NSSGMKPDLYTFSSILTICS 399
++G KPD TF +L CS
Sbjct: 235 IATGTKPDYITFIGLLFACS 254
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/600 (33%), Positives = 328/600 (54%), Gaps = 27/600 (4%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC+ +S +GK++H +++K + S+ N+L ++Y CG + A+ FN++ ++
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHRDP 69
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW +++ A + L F M + G+QP+ + + C + +++ G QVH+
Sbjct: 70 ISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHA 129
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ---MMD 357
I + + V++S++ +Y KCGL D + +FD +S N ++W AMI+G+AQ +D
Sbjct: 130 TFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQSGRKLD 189
Query: 358 LAK-----------------DDLSAHNGGTEALSIFSKLNSSGMK-PDLYTFSSILTICS 399
+ L ++ +F ++ S G+ D + SSI+ +
Sbjct: 190 AIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASA 249
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L L G+QIH L + G+ S + V ALV+MY KC + A ++F M R ++SWTS
Sbjct: 250 NLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRDIVSWTS 309
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
+I G A H L+ +AL L+ ML G++PN+VTFVG + ACS+ G+V + +F M K+Y
Sbjct: 310 IIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDY 369
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
I P + HY CL+D+ R G +EEA + IK M F+P+E W+ ++ C H N +G
Sbjct: 370 GINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRV 429
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
A+ LL LKP+D +Y +L +I+ SA WE V+ V+ L ++ + +S I + +
Sbjct: 430 ADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVLGKESQV 489
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIA 694
F + HP EIF +L+EL + K GY S E ++E +HSE+LA+A
Sbjct: 490 FLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHSERLAVA 549
Query: 695 FGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+GLL + +VK+ +C DCH +K I+ + REI+VRD+ R H F +G C+C +F
Sbjct: 550 YGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGKCSCNNF 609
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 211/428 (49%), Gaps = 46/428 (10%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S V LQ C +S + +H HI+KTG Q + L+N+YGKCG +++A +F+
Sbjct: 4 SHLVYQLQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQ 63
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRL 193
LP + +SW S+++ Q + P L + +F M + G P + + AC+ L +++
Sbjct: 64 LPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQ 123
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-------------SLNS------------ 228
GKQ+HA + DD V +SL +Y+ CG S NS
Sbjct: 124 GKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQ 183
Query: 229 ------AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTS 281
AI+ F ++ KN++SWT +I ++G V F +M S+GI + F L+S
Sbjct: 184 SGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSS 243
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
I + L +G Q+H L I LGY S+L V N+++ +Y KC V A+K+F M +
Sbjct: 244 IIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRD 303
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
+V+W ++I G AQ H EALS+++++ S+G+KP+ TF ++ CS +
Sbjct: 304 IVSWTSIIVGTAQ-----------HGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHV 352
Query: 402 VALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTS 459
+ +G +K G + T L+++ + G +E A + M + +W +
Sbjct: 353 GLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAA 412
Query: 460 MITGFANH 467
+++ +H
Sbjct: 413 LLSACNHH 420
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 7/208 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S++ N L + IH ++ G FV LV++Y KC ++ A+K+F + +
Sbjct: 243 SIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQR 302
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++VSWTS+I G Q+ E A+ ++ ML G P VT + ACS + + G+
Sbjct: 303 DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFF 362
Query: 199 AYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSA---IKAFNRIREKNVMSWTTVIGACGEN 254
++K Y L L S G L A IKA + + +W ++ AC +
Sbjct: 363 NSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMP--FKPDEATWAALLSACNHH 420
Query: 255 GEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+ G+R +LS + P+ + L S
Sbjct: 421 RNTLIGIRVADHLLSLKPEDPSTYILLS 448
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 328/580 (56%), Gaps = 18/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC ++R G+++HA+++K + T + L Y C L A K + + EKNV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT +I + G + + L F++M+ +PNEFT ++ + C L +G Q+H L
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K Y S++ V +S++ +Y K G + EA+++F+ + ++V+ A+IAG+AQ L D
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ---LGLD 235
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL +F +L+S GM P+ T++S+LT S L L+ G+Q H L+
Sbjct: 236 E--------EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
V+ +L++MY KCG + A R+F M RT ISW +M+ G++ H L + L+LF M
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 482 -LAGVRPNQVTFVGALAACSNAGMVYEALGYFE-MMQKEYKIKPVMDHYMCLIDMFVRLG 539
V+P+ VT + L+ CS+ M L F+ M+ EY KP +HY C++DM R G
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAG 407
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
I+EAF+FIK+M +P + + CR H ++++G +L++++P++ +Y +L +
Sbjct: 408 RIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSN 467
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ SAGRW DV V+ + ++ +++ SWI+ + ++ F ND HP+ E+ + E
Sbjct: 468 LYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKE 527
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ K K GY S L D +E + HSEKLA+ FGL+ T PI V K+ +
Sbjct: 528 ISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRI 587
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHNF KI + + RE+ +RD R H+ V+G C+C D+
Sbjct: 588 CVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDY 627
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 202/398 (50%), Gaps = 15/398 (3%)
Query: 59 FQEAL-SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
QEAL + GP++ Y +LL C+++++L + + +HAH++KT ++ T L+
Sbjct: 36 LQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLI 95
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
YGKC +E+A+KV D +P NVVSWT++IS Y Q A+ VF +M+ + P T
Sbjct: 96 FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFT 155
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
T LT+C + LGKQIH +VK+ + VG+SL +Y+ G + A + F +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
E++V+S T +I + G + L F ++ SEG+ PN T S+ + + L G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
H ++ ++NS++ +Y KCG + A++LFD M ++WNAM+ G+
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGY----- 330
Query: 358 LAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIH--ALT 414
S H G E L +F + + +KPD T ++L+ CS + G I +
Sbjct: 331 ------SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ G +V+M + GRI+ A M ++
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G + + + ++L C AL G+++HA +KT +L + T L+ Y KC +E A
Sbjct: 47 GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 106
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--- 499
+V EM + ++SWT+MI+ ++ S +AL +F +M+ + +PN+ TF L +C
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 500 SNAGM----------------VYEALGYFEMMQKEYKIKPVMDHYMCL-----------I 532
S G+ ++ +M K +IK + + CL I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 533 DMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCR-----RHGNM--------ELG 576
+ +LG EEA + ++ E PN V ++ + HG EL
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 577 FYAAEQ 582
FYA Q
Sbjct: 287 FYAVLQ 292
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/655 (32%), Positives = 350/655 (53%), Gaps = 48/655 (7%)
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P + SW + +++ AI +++M +G P N L A S L+ ++ G+
Sbjct: 53 PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112
Query: 196 QIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSL------NSAIKA--------------FN 234
QIHA VK+ +V N+L ++Y CG + N+A+ A F
Sbjct: 113 QIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFE 172
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+++++SW T+I + ++ + L FF M+ EG++ + T+ S+ C + L V
Sbjct: 173 SFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDV 232
Query: 295 GAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G ++H+ ++ N V ++++ +Y C V+ +++FD + + WNAMI+G+A
Sbjct: 233 GKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYA 292
Query: 354 QMMDLAKDDLSAHNGGTE-ALSIFSKL-NSSGMKPDLYTFSSILTIC-SRLVALEQGEQI 410
+ NG E AL +F ++ +G+ P+ T +S++ C L A+ +G++I
Sbjct: 293 R------------NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEI 340
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
HA ++ SD+ VG+ALV+MY KCG + + RVF EM + +I+W +I H
Sbjct: 341 HAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKG 400
Query: 471 HQALQLFEDMLLAGVR-----PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+AL+LF++M+ R PN+VTF+ AACS++G++ E L F M+ ++ ++P
Sbjct: 401 EEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTS 460
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLL 584
DHY C++D+ R G +EEA++ + M E ++V WS + CR H N+ELG AA+ LL
Sbjct: 461 DHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLL 520
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
L+P Y +L +I+ SAG W V+ R+ + + SWI +D+V+ F D
Sbjct: 521 HLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGD 580
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAIAFGLLN 699
HPQS ++ L+ L EK + GY S L ++E+ HSEKLAIAFG+LN
Sbjct: 581 VSHPQSEQLHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILN 640
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
TP + I V K+ +C DCH K I+ + REIIVRD +R H F G C+C D+
Sbjct: 641 TPPGTTIRVAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDY 695
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 225/479 (46%), Gaps = 49/479 (10%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTE----GPKVQT 74
++P++S T K S RS + + + RS F+EA+S E G +
Sbjct: 35 QKPTASPLTSKTPPKPTSPSRSTASWV--DALRSRTRSNDFREAISTYIEMTVSGARPDN 92
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNM-------- 125
++ ++L+ + L E IHA VK G V LVN+YGKCG +
Sbjct: 93 FAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNN 152
Query: 126 ------------EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
++++ +F++ ++VSW ++IS + Q+ + A+ F M+ G
Sbjct: 153 ALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVEL 212
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKA 232
VT+ + L ACS LE + +GK+IHAYV++ + S VG++L +Y C + S +
Sbjct: 213 DGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRV 272
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVC-GTML 290
F+ I + + W +I NG + L F +M+ G+ PN T+ S+ C ++
Sbjct: 273 FDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLA 332
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
++ G ++H+ I+ AS++ V ++++ +Y KCG ++ ++++F+ M + N++TWN +I
Sbjct: 333 AIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIM 392
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-----MKPDLYTFSSILTICSRLVALE 405
H G EAL +F + + KP+ TF ++ CS +
Sbjct: 393 A-----------CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLIS 441
Query: 406 QGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR--TLISWTSMI 461
+G + + + G +V++ + G++E A + M + +W+S++
Sbjct: 442 EGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL 500
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/798 (28%), Positives = 390/798 (48%), Gaps = 105/798 (13%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
E L V E G K + + +L+ C+ L +HA ++K G D + L
Sbjct: 113 HEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCAL 172
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+N+Y KC ++ A +VFD P W +++ +++ + E A+ + M A T+
Sbjct: 173 INLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATD 232
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
T+ L AC L ++ GKQIH YV+++ +TS+ NS+ S+YS L A F+
Sbjct: 233 GTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDS 292
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN-----------------EFT 278
+ N+ SW ++I + NG F +M S I+P+ E
Sbjct: 293 TEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENV 352
Query: 279 LTSISSV---------CGTMLSLR---------VGAQVHSLGIKLGYASNLRVRNSIMYL 320
LT+I S+ C +L+ +G ++H ++ ++ V S++ +
Sbjct: 353 LTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDM 412
Query: 321 YLK-------------------C------------GLVDEAQKLFDGMSH----VNLVTW 345
Y+K C GL D A+KL M +LVTW
Sbjct: 413 YIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTW 472
Query: 346 NAMIAGHAQMMDLAKDDLSAHN-------------------------GGTEALSIFSKLN 380
N++++G++ M +++ L+ N T+AL FS++
Sbjct: 473 NSLVSGYS-MSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQ 531
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+KP+ T S++L C+ L++GE+IH ++K GF+ D+ + TAL++MY K G+++
Sbjct: 532 EENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLK 591
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF + +TL W M+ G+A + + LF++M G+RP+ +TF L+ C
Sbjct: 592 VAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCK 651
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
N+G+V + YF+ M+ +Y I P ++HY C++D+ + G ++EA DFI M + + IW
Sbjct: 652 NSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIW 711
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+A CR H ++++ AA L +L+P + +Y ++++I+ + RW DV +K
Sbjct: 712 GAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAM 771
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ-----QESF 675
+ + WSWI+++ ++ F HP+ EI+ L +L+ + K GY ++
Sbjct: 772 GVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQNI 831
Query: 676 ELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIV 735
+ +++E + H+EKLA+ +GL+ +PI VVK+T +C+DCH K I+ REI +
Sbjct: 832 DDSEKEKVLLSHTEKLAMTYGLMKIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFL 891
Query: 736 RDSKRLHKFVNGHCTCRD 753
RD R H F+NG C+C D
Sbjct: 892 RDGGRFHHFMNGECSCND 909
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 236/561 (42%), Gaps = 63/561 (11%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT-F 114
SLG E + + P+ + + ++L++ +HA ++K + M
Sbjct: 12 SLGTSE--TQIVSSPQFSSPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGNLVTMDGS 69
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ-NSQPELAIHVFLDMLEAGNYP 173
++ Y + G+ E A KVF N + W S + + + VF ++ + G
Sbjct: 70 MMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKF 129
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ L L C +L + LG ++HA ++K + D + +L +LY C ++ A + F
Sbjct: 130 DSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVF 189
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + W T++ A + L +M S + + T+ + CG + +L
Sbjct: 190 DETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALN 249
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+H I+ G SN + NSI+ +Y + ++ A+ +FD NL +WN++I+ +A
Sbjct: 250 EGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYA 309
Query: 354 ------QMMDLAKDD---------------LSAH--NGGTE-ALSIFSKLNSSGMKPDLY 389
DL ++ LS H G E L+ L S+G KPD
Sbjct: 310 VNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSC 369
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ +S L L G++IH +++ DV V T+LV+MY K +E+A VF
Sbjct: 370 SITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHT 429
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ + +W S+I+G+ L A +L M G++ + VT+ ++ S +G EAL
Sbjct: 430 KNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEAL 489
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ IK + PN V W+ I+GC +
Sbjct: 490 A---------------------------------VINRIKSLGLTPNVVSWTAMISGCCQ 516
Query: 570 HGNM--ELGFYAAEQLLKLKP 588
+ N L F++ Q +KP
Sbjct: 517 NENYTDALQFFSQMQEENVKP 537
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 332/589 (56%), Gaps = 20/589 (3%)
Query: 173 PTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P+N + L +C S +++ GKQ+HA + + + + L + YS C SL +A
Sbjct: 55 PSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHH 114
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F++I + N+ W +I A NG + + +ML G++P+ FTL + C + +
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G +H I+ G+ ++ V +++ +Y KCG V +A+ +FD + + V WN+M+A
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAA 234
Query: 352 HAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+AQ NG E+LS+ ++ + G++P T ++++ + + L G +I
Sbjct: 235 YAQ------------NGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREI 282
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H + GF + V TAL++MY KCG ++ A +F + + ++SW ++ITG+A H L+
Sbjct: 283 HGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLA 342
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL LFE M+ +P+ +TFVGALAACS ++ E + +M ++ +I P ++HY C
Sbjct: 343 VEALDLFERMM-KEAQPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTC 401
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ G ++EA+D I++MD P+ +W + C+ HGN+EL A E+L++L+P D
Sbjct: 402 MVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDD 461
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L +++ +G+WE VA ++ L ++ + + SWI +K+KVY+F D HP S
Sbjct: 462 SGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNS 521
Query: 651 AEIFKVLDELVEKAKCFGYKQQES--FELTDEESAS---VYHSEKLAIAFGLLNTPIVSP 705
I+ L L + GY F +E+ + HSE+LAIAFGL++T +
Sbjct: 522 GAIYAELKRLEGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTR 581
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+L+ K+ +C DCH IK I+ +T REI VRD R H F +G C+C D+
Sbjct: 582 LLITKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDY 630
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 197/376 (52%), Gaps = 13/376 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y SLL+ C++ K+L + +HA + + G + + T LVN Y C ++ A +FD +P
Sbjct: 61 YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIP 120
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ N+ W LI Y N E AI ++ MLE G P N TL L ACS+L +I G+
Sbjct: 121 KGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRV 180
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH V++ E D VG +L +Y+ CG + A F++I +++ + W +++ A +NG
Sbjct: 181 IHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGH 240
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L +M ++G++P E TL ++ S + L G ++H G + G+ N +V+ +
Sbjct: 241 PDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTA 300
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG V A LF+ + +V+WNA+I G+A H EAL +F
Sbjct: 301 LIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAM-----------HGLAVEALDLF 349
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKK 435
++ +PD TF L CSR L++G ++ L ++ ++ V T +V++
Sbjct: 350 ERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGH 408
Query: 436 CGRIERASRVFVEMST 451
CG+++ A + +M
Sbjct: 409 CGQLDEAYDLIRQMDV 424
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 16/296 (5%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG E SL Q +L G K + +L+ C ++ +IH ++++G +
Sbjct: 137 NGPHETAISLYHQ----MLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWER 192
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D FV LV++Y KCG + +A+ VFD + + V W S+++ Y QN P+ ++ + +M
Sbjct: 193 DVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMA 252
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G PT TL T +++ + + + G++IH + ++ + + V +L +Y+ CGS+
Sbjct: 253 AKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVK 312
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A F R+REK V+SW +I +G AV+ L F +M+ E QP+ T + C
Sbjct: 313 VACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACS 371
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY------LYLKCGLVDEAQKLFDGM 337
L G +++L ++ + R+ ++ + L CG +DEA L M
Sbjct: 372 RGRLLDEGRALYNLMVR-----DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQM 422
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/586 (34%), Positives = 319/586 (54%), Gaps = 23/586 (3%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFN 234
+L A+ C+ + + K I A++V+ DT + + L S + G + A + F+
Sbjct: 9 SLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAYAHRIFS 65
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
N+ W T+I + + + + M GI PN +T + C +L L
Sbjct: 66 CTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCKLLRLCE 125
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++HS +K+G + N ++ LY CG +D A +FD M + +W+ M++G+AQ
Sbjct: 126 GQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMVSGYAQ 185
Query: 355 MMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG EAL +F ++ + + D +T +S++ +C L AL+ G+ +H+
Sbjct: 186 ------------NGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSY 233
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
K G DVV+GTALV MY KCG ++ A +VF M+ R + +W++MI G+A H +A
Sbjct: 234 MDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKA 293
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
LQLF+ M + PN VTF L+ACS++G+V + FE M EYKI P + HY C++D
Sbjct: 294 LQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVD 353
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+F R G + A FI+ M EPN V+W + C+ HG +LG + + ++LKL P E+
Sbjct: 354 LFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPEN 413
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y ++ +++ S GRW V V++L +++ + WS I I V+ F D HP+ +I
Sbjct: 414 YVLVSNVYASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKI 473
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILV 708
+ +L ++ K K G+ L D +E A HSE+LAIA+GLL+TP SPI +
Sbjct: 474 YGMLHQMARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRI 533
Query: 709 VKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
VK+ +CRDCH IK+I+ + REIIVRD R H F C+C D+
Sbjct: 534 VKNLRVCRDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDY 579
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 203/402 (50%), Gaps = 18/402 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV--NVYGKCGNMEE 127
P + S V+ ++ C + + + I AH+V+ QD F+ + L+ + G++
Sbjct: 3 PMLDQGSLVAAIKRCTR---VGDLKAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAY 59
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A ++F N+ W ++I GY + P AI ++ DM G P + T G L AC
Sbjct: 60 AHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACCK 119
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + G+++H+ +VK + +T + N L LY+ CG ++ A F+ + E + SW+T+
Sbjct: 120 LLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTM 179
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ +NG+AV+ L+ F +M +E + + FTL S+ VCG + +L +G VHS K G
Sbjct: 180 VSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGV 239
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ + +++ +Y KCG +D A K+F GM+ ++ W+ MIAG+A H
Sbjct: 240 KIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYA-----------IHG 288
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVG 426
G +AL +F + S P+ TF+S+L+ CS +E+G QI + + +
Sbjct: 289 HGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHY 348
Query: 427 TALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+V+++ + G + A + M ++ W +++ H
Sbjct: 349 GCMVDLFCRAGMVGHAHKFIQTMPIEPNVVLWRTLLGACKTH 390
>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Cucumis sativus]
Length = 908
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/735 (30%), Positives = 376/735 (51%), Gaps = 55/735 (7%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
++L G + ++V++L C+ +H +VK G F+ L+ +Y KC
Sbjct: 185 FAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFICNALMGLYCKC 244
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTA 181
G ++ ++F+ +P ++ SW ++IS V+ + + A F M L G + +L T
Sbjct: 245 GFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTL 304
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS---------------- 225
LTAC+ G+Q+HA +K E SV +SL Y+ CGS
Sbjct: 305 LTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVTDLFETMPIRDV 364
Query: 226 ---------------LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
L+SA++ FN++ ++N +S+ V+ N + + L F +ML E
Sbjct: 365 ITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEE 424
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G++ ++ TLTSI + CG + S +V Q+ +K G SN + +++ +Y +CG +++A
Sbjct: 425 GVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDA 484
Query: 331 QKLFDGMSHVNLVT--WNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSG-MKP 386
+K+F S N T +MI G+A+ NG EA+S+F S G +
Sbjct: 485 EKIFYQRSLENDYTAMLTSMICGYAR------------NGKLNEAISLFHSGQSEGAIVM 532
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D +SIL++C + E G Q+H LK+G +++ VG A V+MY KC ++ A RVF
Sbjct: 533 DEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVRVF 592
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA--GM 504
M+ + ++SW ++ G H +AL +++ M AG++P+ +TF ++A + +
Sbjct: 593 NTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKPDSITFALIISAYKHTELNL 652
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V F M+ E+ IKP ++HY I + R G +EEA I+ M EP+ +W +
Sbjct: 653 VDSCRSLFVSMETEHNIKPTLEHYASFISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALL 712
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE 624
CR + N L AA +L ++PKD SY + +++ ++GRW V+ RE+ +
Sbjct: 713 NSCRINKNERLEKLAARNILAVEPKDPLSYILKSNLYSASGRWYYSEKVREDMREKGFRK 772
Query: 625 TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS 684
SWI ++K++SF D HPQ +I+ L+ L+ + GY SF L + E
Sbjct: 773 HPSQSWIIHENKIHSFYARDRSHPQGKDIYSGLEILILECLKVGYVPDTSFVLQEVEERQ 832
Query: 685 -----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSK 739
YHS KLA FG+L T PI +VK+ +C DCHNF+K ++ +T R+I++RD+
Sbjct: 833 KKEFLFYHSGKLAATFGILMTKPGKPIQIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTS 892
Query: 740 RLHKFVNGHCTCRDF 754
H F++G C+C D+
Sbjct: 893 GFHWFIDGQCSCTDY 907
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 273/537 (50%), Gaps = 35/537 (6%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
A +HA +K +D F+ L++ Y K G + +A KVF L NVVS+T+LISG+ +
Sbjct: 116 ARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFSK 173
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
+ + A+ +F ML++G P T LTAC +LG Q+H VVK +
Sbjct: 174 SDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVFI 233
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM-LSEG 271
N+L LY CG L+ ++ F + E+++ SW TVI + + + + +F M L +G
Sbjct: 234 CNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVISSLVKEFKYDEAFDYFRGMQLCKG 293
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
++ + F+L+++ + C + G Q+H+L +K+G S+L V +S++ Y KCG ++
Sbjct: 294 LKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIGFYTKCGSANDVT 353
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQ--MMDLAKD------------------DLSAHNGGTE 371
LF+ M +++TW MI + + M+D A + LS ++ G+
Sbjct: 354 DLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSR 413
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL +F ++ G++ T +SI+T C L + + +QI +K G LS+ + TALV+
Sbjct: 414 ALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVMKFGILSNSCIETALVD 473
Query: 432 MYKKCGRIERASRVFVEMSTRTLIS--WTSMITGFANHSLSHQALQLFEDMLLAG-VRPN 488
MY +CGR+E A ++F + S + TSMI G+A + ++A+ LF G + +
Sbjct: 474 MYTRCGRMEDAEKIFYQRSLENDYTAMLTSMICGYARNGKLNEAISLFHSGQSEGAIVMD 533
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFD 546
+V L+ C + G + +G +M K + + + + M+ + +++A
Sbjct: 534 EVMSTSILSLCGSIG--FHEMG-MQMHCHALKSGLITETGVGNATVSMYSKCWNMDDAVR 590
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRH--GNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
M+ + + V W+ +AG H G+ LG + + +KP D ++A+++ +
Sbjct: 591 VFNTMNMQ-DIVSWNGLVAGHVLHWQGDKALGIWKKMEKAGIKP-DSITFALIISAY 645
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 202/417 (48%), Gaps = 24/417 (5%)
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
L + +HA +K E+D +GN+L S Y G + A K F+ + NV+S+T +I
Sbjct: 115 LARAVHAQFLKL--EEDIFLGNALISAYLKLGLVRDADKVFSGLSCPNVVSYTALISGFS 172
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
++ + + F ML GI+PNE+T +I + C + ++G+QVH + +KLG S +
Sbjct: 173 KSDWEDEAVELFFAMLDSGIEPNEYTFVAILTACIRNMDYQLGSQVHGIVVKLGLLSCVF 232
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ N++M LY KCG +D +LF+ M ++ +WN +I + ++ K D EA
Sbjct: 233 ICNALMGLYCKCGFLDLVLRLFEEMPERDITSWNTVI---SSLVKEFKYD--------EA 281
Query: 373 LSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
F + G+K D ++ S++LT C+ V +G+Q+HAL LK G S + V ++L+
Sbjct: 282 FDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHALALKVGLESHLSVSSSLIG 341
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG + +F M R +I+WT MIT + + A+++F M + N ++
Sbjct: 342 FYTKCGSANDVTDLFETMPIRDVITWTGMITSYMEFGMLDSAVEVFNKM----PKRNCIS 397
Query: 492 FVGALAACSNAGMVYEALGYF-EMMQKEYKIKP-VMDHYMCLIDMFVRLGCIEEAFDFIK 549
+ LA S AL F EM+++ +I + + + ++ F+
Sbjct: 398 YNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITACGLLKSFKVSQQIQGFVM 457
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
K N I + + R G ME AE++ + + + AML + R
Sbjct: 458 KFGILSNSCIETALVDMYTRCGRME----DAEKIFYQRSLENDYTAMLTSMICGYAR 510
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 159/327 (48%), Gaps = 14/327 (4%)
Query: 31 KNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSL 90
K + +SY + L L+ N + R+L + + +L EG ++ + S++ C KS
Sbjct: 392 KRNCISYN---AVLAGLSRNDDGSRAL--ELFIEMLEEGVEISDCTLTSIITACGLLKSF 446
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF--DNLPRINVVSWTSLIS 148
++ I ++K G + + T LV++Y +CG ME+A+K+F +L TS+I
Sbjct: 447 KVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTAMLTSMIC 506
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTE 207
GY +N + AI +F G + + T+ L+ C S+ +G Q+H + +K
Sbjct: 507 GYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCHALKSGLI 566
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
+T VGN+ S+YS C +++ A++ FN + ++++SW ++ + + + L + KM
Sbjct: 567 TETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKALGIWKKM 626
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR----NSIMYLYLK 323
GI+P+ T I S L + SL + + N++ S + + +
Sbjct: 627 EKAGIKPDSITFALIISAY-KHTELNLVDSCRSLFVSMETEHNIKPTLEHYASFISVLGR 685
Query: 324 CGLVDEAQKLFDGMS-HVNLVTWNAMI 349
GL++EA++ M ++ W A++
Sbjct: 686 WGLLEEAEQTIRNMPLEPDVYVWRALL 712
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/596 (33%), Positives = 324/596 (54%), Gaps = 23/596 (3%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
ML G P N T + ACS L G +IH VVK+ + + NSL ++Y C
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
+ + F+ + +KN +SW+ +IGAC ++ +G F +MLSEG +P+ +I +
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNA 117
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ S V+ + ++ G + V+++ ++ +CG V+ A+KLFDG+ +LVTW
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
I + K D+ EAL + ++ G+ PD T ++ CS L + +
Sbjct: 178 ATTIEAYV------KADMP-----LEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQ 226
Query: 406 QGEQIHALTLKTGFLSD--VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+H + + TGF + + V TAL+++Y KCG + A +VF M R +I+W++MI+G
Sbjct: 227 LAHIVHGI-ITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISG 285
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+ H +AL LF D + A V+P+ +TFV L+ACS++G+V E F M +++ + P
Sbjct: 286 YGMHGWGREALNLF-DQMKASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTP 344
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+HY C++D+ R G ++EA DFI++M PN +W + CR H N++L A L
Sbjct: 345 RPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARAL 404
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
L P + Y +L +I+ G+ ++ ++ L + + + +S I IK+K+Y+F
Sbjct: 405 FDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAG 464
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
D HPQ+ I+ L+ L+++ + GY +F L D +ES HSEKLAI FGLL
Sbjct: 465 DRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLL 524
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
N S I + K+ +C DCH K I+ +T REI+VRD+ R H F NG C+CRD+
Sbjct: 525 NLGPGSVIRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDY 580
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 198/392 (50%), Gaps = 21/392 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + ++ +++ C + IH +VK G F+ L+ +YGKC
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
E +++VFD +P N VSW+++I +Q+ + + +F ML G+ P+ G L A
Sbjct: 61 YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNA 117
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ + S ++ VV+ + D SV ++ +++ CG + A K F+ I K++++W
Sbjct: 118 MACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTW 177
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T I A + ++ L +M+ +GI P+ TL + C T+ S ++ VH + I
Sbjct: 178 ATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGI-IT 236
Query: 305 LGYASN--LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
G+ N L V +++ LY+KCG + A+K+FDGM N++TW+AMI+G+
Sbjct: 237 TGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGM-------- 288
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR--LVALEQGEQIHALTLKTGFL 420
H G EAL++F ++ +S +KPD TF SIL+ CS LVA E E +++ G
Sbjct: 289 ---HGWGREALNLFDQMKAS-VKPDHITFVSILSACSHSGLVA-EGWECFNSMARDFGVT 343
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+V++ + G+++ A M R
Sbjct: 344 PRPEHYACMVDILGRAGKLDEACDFIERMPVR 375
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 176/383 (45%), Gaps = 32/383 (8%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF +L+EG + + ++ + CV +S A+ ++ +V+ G D V +
Sbjct: 95 GFSLFRQMLSEGSRPSRGAILNAMA-CV--RSHEEADDVYRVVVENGLDFDQSVQSAAAG 151
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
++ +CG +E A+K+FD + ++V+W + I YV+ P A+ + M+ G +P +T
Sbjct: 152 MFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAIT 211
Query: 178 LGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
L + ACS+L S +L +H + + +V +L LY CGSL A K F+ +
Sbjct: 212 LLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGM 271
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+E+N+++W+ +I G +G + L F +M ++P+ T SI S C + G
Sbjct: 272 QERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGW 330
Query: 297 Q-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG--- 351
+ +S+ G ++ + + G +DEA + M N W A++
Sbjct: 331 ECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRI 390
Query: 352 H-----AQMMDLAKDDLSAHNGG---------------TEALSIFSKLNSSGMKPDLYTF 391
H A+M+ A DL HN G EA SI + + + G+K
Sbjct: 391 HLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKK--IAG 448
Query: 392 SSILTICSRLVALEQGEQIHALT 414
S++ I ++L A G++ H T
Sbjct: 449 YSVIEIKNKLYAFVAGDRSHPQT 471
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 346/635 (54%), Gaps = 18/635 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + ++ +H I K G D + L+++Y K + EA++VF +
Sbjct: 227 SVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+ V+W ++I GY Q + E ++ +F+DM++ G P +++ + + AC +++GK +H
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGKFVH 345
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
Y++ E DT N L +Y+ CG L +A + F+ + K+ ++W ++I ++G
Sbjct: 346 KYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYK 405
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+GL F KM+ +P+ T + S+ + + G +H IK G+ + L + NS++
Sbjct: 406 EGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLL 464
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG +D+ K+F MS ++++WN +IA D T + ++
Sbjct: 465 DVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDC-----------TVGFQMINE 513
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + G+ PD T IL +CS L QG++IH K+GF S+V +G AL+ MY KCG
Sbjct: 514 MRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGS 573
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+E +VF M + +++WT++I+ F + +AL+ F+DM L+GV P+ V F+ + A
Sbjct: 574 LENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFA 633
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS++GMV E L +F+ M+ +Y ++P M+HY C++D+ R G + +A +FI M +P+
Sbjct: 634 CSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDAS 693
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR GN + ++++L+L D Y ++ +I+ + G+W+ V V+N +
Sbjct: 694 LWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMK 753
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ L + SWI I+ +VY F+ D Q ++ +L+ LV GY F L
Sbjct: 754 TKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAKEGYVADLQFALH 813
Query: 679 DEESASVY-----HSEKLAIAFGLLNTPIVSPILV 708
D E HSE+LAIAFGLLNT SP+L+
Sbjct: 814 DVEEDDKRDMLCGHSERLAIAFGLLNTKPGSPLLI 848
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/560 (28%), Positives = 269/560 (48%), Gaps = 29/560 (5%)
Query: 23 SSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLG----FQEALSVLTE--GPKVQTSS 76
S A +KD +VS RS S + + +R+L F +AL TE K+Q +
Sbjct: 62 SKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDA 121
Query: 77 YV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+ S++ C L I+H H ++ G D ++ L+++Y + +++ A+ VF+
Sbjct: 122 FTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEE 181
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + VSW SLISGY N E A+ ++ G P T+ + L AC SL +++ G
Sbjct: 182 MSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEG 241
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+H + K D +GN L S+Y L A + F+++ K+ ++W T+I +
Sbjct: 242 VAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQL 301
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G ++ F M+ +G P+ ++TS CG L+VG VH I G+ +
Sbjct: 302 GRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVAC 360
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N ++ +Y KCG + AQ++FD + VTWN++I G+ Q + G E+
Sbjct: 361 NILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQS--------GYYKEGLESF- 411
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
K+ KPD TF +L+I S+L + QG IH +K GF +++++G +L+++Y
Sbjct: 412 ---KMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG ++ +VF MS +ISW ++I + Q+ +M G+ P++ T +G
Sbjct: 469 KCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528
Query: 495 ALAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
L CS + E GY E + P+ + LI+M+ + G +E K M
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNV-PIGN---ALIEMYSKCGSLENCIKVFKYM 584
Query: 552 DFEPNEVIWSVFIAGCRRHG 571
E + V W+ I+ +G
Sbjct: 585 K-EKDVVTWTALISAFGMYG 603
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 243/502 (48%), Gaps = 20/502 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PR 137
SLL+ + K+ +H+ I+ +G L++ Y + + + VF ++ P
Sbjct: 24 SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
NV W S+I N A+ + +M E P T + + +C+ + + LG +
Sbjct: 84 NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H + ++ E D +GN+L +YS L++A F + ++ +SW ++I NG
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
L + K G+ P+ FT++S+ CG++++++ G VH + K+G A ++ + N +
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ +Y K + EA+++F M+ + VTWN MI G+AQ L H ++ +F
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQ--------LGRHEA---SVKLFM 312
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ G PD+ + +S + C + L+ G+ +H + +GF D V L++MY KCG
Sbjct: 313 DM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCG 371
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
+ A VF + ++W S+I G+ + L+ F+ M+ +P+ VTFV L+
Sbjct: 372 DLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLS 430
Query: 498 ACSNAGMVYEALG-YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
S + + G + ++++ ++ + ++ + L+D++ + G +++ M +
Sbjct: 431 IFSQLADINQGRGIHCDVIKFGFEAELIIGN--SLLDVYAKCGEMDDLLKVFSYM--SAH 486
Query: 557 EVI-WSVFIAGCRRHGNMELGF 577
++I W+ IA + +GF
Sbjct: 487 DIISWNTVIASSVHFDDCTVGF 508
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 4/294 (1%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
E+ ++ K + ++V LL ++ IH ++K G + + L++VY
Sbjct: 409 ESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYA 468
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG M++ KVF + +++SW ++I+ V + + +M G P T+
Sbjct: 469 KCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLG 528
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L CS L R GK+IH Y+ K E + +GN+L +YS CGSL + IK F ++EK+
Sbjct: 529 ILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKD 588
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V++WT +I A G GE + L+ F M G+ P+ + C ++ G +
Sbjct: 589 VVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFD 648
Query: 301 LGIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+K Y R+ + ++ L + GL+ +A++ M + W A+++
Sbjct: 649 -RMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSA 701
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++GFQ + TEG ++ + +L C + IH +I K+G + + L
Sbjct: 505 TVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNAL 564
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCG++E KVF + +VV+WT+LIS + + + A+ F DM +G P +
Sbjct: 565 IEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDS 624
Query: 176 VTLGTALTACSSLESIRLGKQIHAYV-VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V + ACS ++ G + + Y E + L + G L A +
Sbjct: 625 VAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFIL 684
Query: 235 RIREKNVMS-WTTVIGACGENGEAVQGLRFFSKML 268
+ K S W ++ AC G R K+L
Sbjct: 685 SMPMKPDASLWGALLSACRARGNTNIAQRVSKKIL 719
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/604 (33%), Positives = 332/604 (54%), Gaps = 16/604 (2%)
Query: 66 LTEGPKVQTSSYVS-LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
L EG V +S +L C L + IHAHI++ G +D +M L++ Y KCG
Sbjct: 240 LMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGR 299
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ A K+FD +P N++SWT+L+SGY QNS + A+ +F M + G P + LT+
Sbjct: 300 VRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SL ++ G Q+HAY +K +D+ V NSL +Y+ C L A K F+ +V+ +
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLF 419
Query: 245 TTVI---GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+I G E L F M I+P+ T S+ ++ SL + Q+H L
Sbjct: 420 NAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGL 479
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
K G ++ ++++ +Y C + +++ +FD M +LV WN+M +G+ Q +
Sbjct: 480 MFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSE---- 535
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
EAL++F +L S +PD +TF ++T L +L+ G++ H LK G
Sbjct: 536 -------NEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLEC 588
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ + AL++MY KCG E A + F ++R ++ W S+I+ +ANH +ALQ+ E M+
Sbjct: 589 NPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMM 648
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ PN +TFVG L+ACS+AG+V + L FE+M + + I+P +HY+C++ + R G +
Sbjct: 649 CEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRL 707
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA + I+KM +P ++W ++GC + GN+EL YAAE + PKD S+ +L +I+
Sbjct: 708 NEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIY 767
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S G W D V+ + E + + SWI I +V+ F D H ++ +I++VLD+L+
Sbjct: 768 ASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLL 827
Query: 662 EKAK 665
+ +
Sbjct: 828 VQIR 831
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 287/548 (52%), Gaps = 48/548 (8%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+ + +VK+ +D +V T L++ Y K GN++ A+ VFD LP + V+WT++ISG V+ +
Sbjct: 170 LQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+++ +F ++E P L T L+ACS L + GKQIHA++++Y E D S+ N
Sbjct: 230 SYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNV 289
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L Y CG + +A K F+ + KN++SWTT++ +N + + F+ M G++P+
Sbjct: 290 LIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPD 349
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
F +SI + C ++ +L G QVH+ IK ++ V NS++ +Y KC + EA+K+FD
Sbjct: 350 MFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFD 409
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
+ ++V +NAMI G+++ L +AL+IF + ++P L TF S+L
Sbjct: 410 IFAADDVVLFNAMIEGYSR--------LGTQWELHDALNIFHDMRFRLIRPSLLTFVSLL 461
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ L +L +QIH L K G D+ G+AL+ +Y C ++ + VF EM + L+
Sbjct: 462 RASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEM 514
W SM +G+ S + +AL LF ++ L+ RP++ TFV + A N A + + ++
Sbjct: 522 IWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQL 581
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEE---AFD------------------------- 546
+++ + P + + L+DM+ + G E+ AFD
Sbjct: 582 LKRGLECNPYITN--ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRK 639
Query: 547 ---FIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLL 598
++KM EPN + + ++ C G +E G E +L+ ++P + E Y ++
Sbjct: 640 ALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEP-ETEHYVCMV 698
Query: 599 DIFVSAGR 606
+ AGR
Sbjct: 699 SLLGRAGR 706
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 280/547 (51%), Gaps = 45/547 (8%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ LLQ L ++H I+ +G D ++ L+N+Y + G M A+KVF+ +P
Sbjct: 47 FARLLQLRALDDPLLYHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMP 106
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPTNVTLGTALTACSSLESIRLGK 195
N+V+W++++S + E ++ VFLD N P L + + ACS L+ G+
Sbjct: 107 ERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGS--GR 164
Query: 196 ----QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
Q+ +++VK + + D VG L Y G+++ A F+ + EK+ ++WTT+I C
Sbjct: 165 WMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGC 224
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ G + L+ F +++ + P+ + L+++ S C + L G Q+H+ ++ G+ +
Sbjct: 225 VKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDA 284
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ N ++ Y+KCG V A KLFDGM + N+++W +++G+ Q S H E
Sbjct: 285 SLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQN--------SLHK---E 333
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F+ + G+KPD++ SSILT C+ L ALE G Q+HA T+K +D V +L++
Sbjct: 334 AMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLID 393
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS---HQALQLFEDMLLAGVRPN 488
MY KC + A +VF + ++ + +MI G++ H AL +F DM +RP+
Sbjct: 394 MYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPS 453
Query: 489 QVTFVGAL---AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEE 543
+TFV L A+ ++ G+ + G +K +D + LI ++ C+++
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLM------FKFGLNLDIFAGSALIAVYSNCYCLKD 507
Query: 544 A---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAMLL 598
+ FD +K D VIW+ +G + E L + QL + +P + +
Sbjct: 508 SRLVFDEMKVKDL----VIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDE----FTFV 559
Query: 599 DIFVSAG 605
D+ +AG
Sbjct: 560 DMVTAAG 566
>gi|15217470|ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71420
gi|12323734|gb|AAG51830.1|AC016163_19 hypothetical protein; 56014-58251 [Arabidopsis thaliana]
gi|332197078|gb|AEE35199.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 745
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 238/741 (32%), Positives = 387/741 (52%), Gaps = 73/741 (9%)
Query: 54 VRSLGFQEALSVLTEGP-KVQTS-SYVSLLQECVNRKSLSNAEIIHAHIVKTGSH----- 106
VRS + A+S+ P ++Q+ +Y +L Q C +++L + +H H++ SH
Sbjct: 37 VRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHML---SHPYCYS 93
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
Q+ + FL+N+Y KCGN+ A++VFD +P NVVSWT+LI+GYVQ + +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
L + +P TL + LT+C GKQ+H +K V N++ S+Y C
Sbjct: 154 L-SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 227 NSAIKA---FNRIREKNVMSWTTVIGA--CGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
+A +A F I+ KN+++W ++I A C G+ G+ F +M S+G+ + TL +
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGV--FMRMHSDGVGFDRATLLN 266
Query: 282 ISSVCGTMLSL------RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD--EAQKL 333
I S L + Q+HSL +K G + V +++ +Y + L D + KL
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM-LEDYTDCYKL 325
Query: 334 FDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F MSH ++V WN +I A + D + A+ +F +L + PD YTFS
Sbjct: 326 FMEMSHCRDIVAWNGIITAFA-VYDPER-----------AIHLFGQLRQEKLSPDWYTFS 373
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+L C+ LV IHA +K GFL+D V+ +L++ Y KCG ++ RVF +M +R
Sbjct: 374 SVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR 433
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++SW SM+ ++ H L +F+ M + P+ TF+ L+ACS+AG V E L F
Sbjct: 434 DVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIF 490
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M ++ + P ++HY C+IDM R EA + IK+M +P+ V+W + CR+HGN
Sbjct: 491 RSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
Query: 573 MELGFYAAEQLLKL-KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
LG AA++L +L +P + SY + +I+ + G + + + ++ + D SW
Sbjct: 551 TRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWT 610
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS------- 684
I +KV+ F P +++ L L+ K GY + + SAS
Sbjct: 611 EIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGY-------VPEMRSASQDIEDEE 663
Query: 685 ------VYHSEKLAIAFGLLNTPI-----VSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
++HSEKLA+AF ++ V+ I ++K+T +C DCHNF+K+ + L +EI
Sbjct: 664 QEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEI 723
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
++RDS R H F + C+C D+
Sbjct: 724 LMRDSNRFHHFKDSSCSCNDY 744
>gi|5262797|emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
gi|7268904|emb|CAB79107.1| putative protein (fragment) [Arabidopsis thaliana]
Length = 1495
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/567 (35%), Positives = 328/567 (57%), Gaps = 27/567 (4%)
Query: 188 LESIRLGKQIHAYVVKYQTE-DDTSVGNSL----CSLYSTCGSLNSAIKAFNRIREK-NV 241
+ SI +QIHA+ +++ D +G L SL S ++ A K F++I + NV
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFSKIEKPINV 85
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
W T+I E G ++ + +M G ++P+ T + TM +R+G +HS
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+ I+ G+ S + V+NS+++LY CG V A K+FD M +LV WN++I G A+
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE------ 199
Query: 361 DDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
NG E AL++++++NS G+KPD +T S+L+ C+++ AL G+++H +K G
Sbjct: 200 ------NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 253
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
++ L+++Y +CGR+E A +F EM + +SWTS+I G A + +A++LF+
Sbjct: 254 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 313
Query: 480 M-LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M G+ P ++TFVG L ACS+ GMV E YF M++EYKI+P ++H+ C++D+ R
Sbjct: 314 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G +++A+++IK M +PN VIW + C HG+ +L +A Q+L+L+P Y +L
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 433
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ S RW DV ++ + + + S + + ++V+ F D HPQS I+ L
Sbjct: 434 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLK 493
Query: 659 ELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
E+ + + GY Q S E ++E+A VYHSEK+AIAF L++TP SPI VVK+
Sbjct: 494 EMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLR 553
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKR 740
+C DCH IK+++ + REI+VRD R
Sbjct: 554 VCADCHLAIKLVSKVYNREIVVRDRSR 580
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 31/406 (7%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR-INVVSWTSLI 147
S+S+AE+ G H F++++ M A KVF + + INV W +LI
Sbjct: 46 SISDAEL--------GKHLIFYLVSL-----PSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 148 SGYVQNSQPELAIHVFLDMLEAG-NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
GY + A ++ +M +G P T + A +++ +RLG+ IH+ V++
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
V NSL LY+ CG + SA K F+++ EK++++W +VI ENG+ + L +++
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M S+GI+P+ FT+ S+ S C + +L +G +VH IK+G NL N ++ LY +CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS-GMK 385
V+EA+ LFD M N V+W ++I G L+ + G EA+ +F + S+ G+
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVG-----------LAVNGFGKEAIELFKYMESTEGLL 321
Query: 386 PDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
P TF IL CS +++G E + + + +V++ + G++++A
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 445 VFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
M + ++ W +++ H S L F + + + PN
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNH 425
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 8/307 (2%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
GNS SL + +S L E T +Y L++ + E IH+ ++++G
Sbjct: 99 GNSISAFSLYREMRVSGLVEP---DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSL 155
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+V L+++Y CG++ A KVFD +P ++V+W S+I+G+ +N +PE A+ ++ +M
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P T+ + L+AC+ + ++ LGK++H Y++K + N L LY+ CG +
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCG 287
A F+ + +KN +SWT++I NG + + F M S EG+ P E T I C
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
++ G + + ++ Y R+ + ++ L + G V +A + M N+V
Sbjct: 336 HCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 345 WNAMIAG 351
W ++
Sbjct: 395 WRTLLGA 401
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/593 (34%), Positives = 327/593 (55%), Gaps = 22/593 (3%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA +KT + D FV + L+N+Y K G M +A+KVFD +P N VSW ++ISGY
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
A +F M + L+A + + + GKQIH +K SVGN+L
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNAL 255
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
++Y CG L+ A+K F +K+ ++W+ +I + G++ + L F M G +P+E
Sbjct: 256 VTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
FT + + C + +L G Q+H +K GY + +++ +Y KCG + +A+K FD
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDY 375
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSIL 395
+ ++V W +MI+G+AQ NG E AL+++ ++ + P T +S+L
Sbjct: 376 LKEPDIVLWTSMISGYAQ------------NGENETALTLYCRMQMERIMPHELTMASVL 423
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
CS L ALEQG+QIHA T+K GF +V +G+AL MY KCG +E + VF M +R ++
Sbjct: 424 RACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIM 483
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
+W +MI+G + + +AL+LFE++ +P+ VTFV L+ACS+ G+V YF MM
Sbjct: 484 TWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMM 543
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
E+ I P ++HY C++D+ R G + E +FI+ + +W + + CR + N EL
Sbjct: 544 LDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYEL 603
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G YA E+L++L ++ +Y +L I+ + GR +DV V+ L + +++ SWI +K
Sbjct: 604 GAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIELKS 663
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVE--KAKCFGYKQQESFELTDEESASVY 686
+V+ F D +HPQ +I L L + K +C+ ESF D S ++Y
Sbjct: 664 QVHVFVVGDQIHPQIVKICSELRRLRDHMKDECY-----ESF--NDTNSMTLY 709
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 279/582 (47%), Gaps = 41/582 (7%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
Q S+V LL C +K L + IHA +++TGS ++ LVN+Y KCG++ +A+ VF
Sbjct: 9 QHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVF 68
Query: 133 DNLPRINVVSWTSLISGYVQNSQP--ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+++ +VVSW LI+GY Q + +F M P T TA SS
Sbjct: 69 ESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPE 128
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
G Q HA +K D VG+SL ++Y G + A K F+ I E+N +SW T+I
Sbjct: 129 TFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISG 188
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
A + F M E ++F TS+ S + G Q+H L +K G S
Sbjct: 189 YAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSI 248
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V N+++ +Y KCG +D+A K F+ + +TW+AMI G+AQ D +H
Sbjct: 249 ASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGD-------SH---- 297
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL++F ++ +G KP +TF ++ CS + ALE+G+QIH +LK G+ + TALV
Sbjct: 298 EALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALV 357
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG + A + F + ++ WTSMI+G+A + + AL L+ M + + P+++
Sbjct: 358 DMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHEL 417
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
T L ACS+ + E +Y + L M+ + G +E+ ++
Sbjct: 418 TMASVLRACSSLAAL-EQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRR 476
Query: 551 MDFEPNEVI--WSVFIAGCR---------------RHGNMELGFYAAEQLLK------LK 587
M P+ I W+ I+G RHG + + +L L
Sbjct: 477 M---PSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLV 533
Query: 588 PKDCESYAMLLDIFVSAGRWEDVA-VVKNLTREEKLSETDDW 628
+ + M+LD F R E A +V L+R KL ET ++
Sbjct: 534 ERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEF 575
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/376 (29%), Positives = 199/376 (52%), Gaps = 13/376 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y S+L + + IH +K G V LV +YGKCG +++A K F+
Sbjct: 217 YTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSG 276
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
+ ++W+++I+GY Q A+++F +M GN P+ T + ACS + ++ GKQ
Sbjct: 277 DKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQ 336
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH Y +K E +L +Y+ CGSL A K F+ ++E +++ WT++I +NGE
Sbjct: 337 IHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGE 396
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L + +M E I P+E T+ S+ C ++ +L G Q+H+ IK G++ + + ++
Sbjct: 397 NETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSA 456
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+ +Y KCG +++ +F M +++TWNAMI+G LS + G +AL +F
Sbjct: 457 LSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISG-----------LSQNGEGLKALELF 505
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL-KTGFLSDVVVGTALVNMYKK 435
+L KPD TF ++L+ CS + +E+G+ + L + G + V +V++ +
Sbjct: 506 EELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSR 565
Query: 436 CGRIERASRVFVEMST 451
G++ ++ F+E +T
Sbjct: 566 AGKLHE-TKEFIESAT 580
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 124/221 (56%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++V ++ C + +L + IH + +K G + MT LV++Y KCG++ +A
Sbjct: 310 GNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDA 369
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+K FD L ++V WTS+ISGY QN + E A+ ++ M P +T+ + L ACSSL
Sbjct: 370 RKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSL 429
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ GKQIHA +KY + +G++L ++Y+ CGSL F R+ +++M+W +I
Sbjct: 430 AALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMI 489
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+NGE ++ L F ++ +P+ T ++ S C M
Sbjct: 490 SGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHM 530
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 153/303 (50%), Gaps = 15/303 (4%)
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ P + + C L+ G +H+ ++ G S++ + NS++ LY KCG + +A+
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
+F+ +++ ++V+WN +I G++Q + G + + +F ++ + P+ +TF
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTV---------GYSFVMELFQRMRAENTLPNGHTF 116
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S + T S G Q HAL +KT DV VG++L+NMY K G + A +VF +
Sbjct: 117 SGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPE 176
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY--EAL 509
R +SW ++I+G+A ++ +A +LF M ++ + L+A + +V+ + +
Sbjct: 177 RNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQI 236
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ I V + L+ M+ + GC+++A ++ + +++ WS I G +
Sbjct: 237 HCLALKNGLLSIASVGN---ALVTMYGKCGCLDDALKTF-ELSGDKDDITWSAMITGYAQ 292
Query: 570 HGN 572
G+
Sbjct: 293 AGD 295
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/637 (32%), Positives = 335/637 (52%), Gaps = 36/637 (5%)
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLE----AGNYPTNVTLGTALTACSSLESIRLGKQI 197
SW I AI +FL M A +L AL +C++L LG +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGS--------------LNSAIKAFNRIREKNVMS 243
HA ++ D N+L +LY + L S K F+ + EK+V+S
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W T++ C E+G + L +M +G +P+ FTL+S+ + +R G ++H
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ G+ ++ V +S++ +Y C D + K+FD + + + WN+M+AG AQ
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQ--------- 251
Query: 364 SAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
NG EAL +F ++ SG+KP TFSS++ C L +L G+Q+HA ++ GF +
Sbjct: 252 ---NGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGN 308
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V + ++L++MY KCG + A R+F + + ++SWT+MI G A H + +AL LF+ M L
Sbjct: 309 VFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMEL 368
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
++PN +TF+ L ACS+AG+V + YF M Y I P ++H+ L D R G +E
Sbjct: 369 GNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLE 428
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
EA++FI M +P +WS + C+ H N L A+++ L+P+ S+ +L + +
Sbjct: 429 EAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYS 488
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
S+GRW + A ++ R++ + + SWI +K+K + F +D HP I L+ E
Sbjct: 489 SSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSE 548
Query: 663 KAKCFGY--KQQESFELTDEE---SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
+ GY + F+ +EE S HSEKLAI FG+++TP + I V+K+ +C D
Sbjct: 549 QMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVD 608
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH K I+ + REI++RD+ R H F +G C+C DF
Sbjct: 609 CHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDF 645
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 197/388 (50%), Gaps = 27/388 (6%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVY--------------GKCGNMEEAQKVFDNLPRINVV 141
+HA +++G+ D F L+N+Y G +E +KVFD +P +VV
Sbjct: 80 LHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SW +L+ G ++ + A+ + +M G P + TL + L + +R G ++H +
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
+ DD VG+SL +Y+ C + ++K F+ + ++ + W +++ C +NG + L
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F +ML GI+P T +S+ CG + SL +G Q+H+ I+ G+ N+ + +S++ +Y
Sbjct: 260 GLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMY 319
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
KCG V A+++FD + ++V+W AMI GHA H EAL +F ++
Sbjct: 320 CKCGNVSIARRIFDRIQSPDIVSWTAMIMGHA-----------LHGPAREALVLFDRMEL 368
Query: 382 SGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
+KP+ TF ++LT CS +++G + ++++ G + + AL + + G++E
Sbjct: 369 GNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLE 428
Query: 441 RASRVFVEMSTRTLIS-WTSMITGFANH 467
A M + S W++++ H
Sbjct: 429 EAYNFISGMKIKPTASVWSTLLRACKVH 456
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/680 (30%), Positives = 361/680 (53%), Gaps = 53/680 (7%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L + + K+L N +H+ + H++ + L+ Y G A+ VFD +P N
Sbjct: 41 VLDQYPDIKTLKN---VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERN 97
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
V+ + +I Y+ N + A+ VF DM+ G P + T L ACS +++R+G Q+H
Sbjct: 98 VIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHG 157
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
V K + + VGN L +LY CG L A + ++ K+V+SW +++ +N +
Sbjct: 158 AVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDD 217
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L +M +P+ T+ S+ L +N N ++Y
Sbjct: 218 ALDICREMDGVRQKPDACTMASL----------------------LPAVTNTSSEN-VLY 254
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+ +++F + +LV+WN MI+ + + ++ +++ ++ ++
Sbjct: 255 V----------EEMFMNLEKKSLVSWNVMISVYMK-----------NSMPGKSVDLYLQM 293
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
++PD T +S+L C L AL G +IH + ++++ +L++MY +CG +
Sbjct: 294 GKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCL 353
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E A RVF M R + SWTS+I+ + + A+ LF +M +G P+ + FV L+AC
Sbjct: 354 EDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSAC 413
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
S++G++ E YF+ M +YKI P+++H+ CL+D+ R G ++EA++ IK+M +PNE +
Sbjct: 414 SHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERV 473
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
W ++ CR + NM++G AA++LL+L P++ Y +L +I+ AGRW +V +++L +
Sbjct: 474 WGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKR 533
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-----ES 674
++ + S + + ++V++F D HPQS EI++ L LV K K GY +
Sbjct: 534 RRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHD 593
Query: 675 FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
E D+E HSEKLAI F +LNT SPI + K+ +C DCH K+I+ + REI+
Sbjct: 594 VEEEDKECHLAVHSEKLAIVFAILNTQ-ESPIRITKNLRVCGDCHIAAKLISKIVQREIV 652
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
+RD+ R H F +G C+C D+
Sbjct: 653 IRDTNRFHHFKDGICSCGDY 672
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 175/378 (46%), Gaps = 45/378 (11%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y +L+ C +L +H + K G + FV L+ +YGKCG + EA+ V D +
Sbjct: 135 TYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEM 194
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSW S+++GY QN Q + A+ + +M P T+ + L A +
Sbjct: 195 QSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVT--------- 245
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+TS N L + F + +K+++SW +I +N
Sbjct: 246 -------------NTSSENVL-----------YVEEMFMNLEKKSLVSWNVMISVYMKNS 281
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + + +M ++P+ T S+ CG + +L +G ++H + N+ + N
Sbjct: 282 MPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLEN 341
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
S++ +Y +CG +++A+++FD M ++ +W ++I+ + G A+++
Sbjct: 342 SLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMT-----------GQGYNAVAL 390
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYK 434
F+++ +SG PD F +IL+ CS L +G+ ++ ++ A LV++
Sbjct: 391 FTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLG 450
Query: 435 KCGRIERASRVFVEMSTR 452
+ GR++ A + +M +
Sbjct: 451 RSGRVDEAYNIIKQMPMK 468
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
NS P +S+ + P T + S+L+ C + +L IH ++ + +
Sbjct: 280 NSMPGKSVDLYLQMGKCEVEPDAITCA--SVLRACGDLSALLLGRRIHEYVERKKLCPNM 337
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ L+++Y +CG +E+A++VFD + +V SWTSLIS Y Q A+ +F +M +
Sbjct: 338 LLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNS 397
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD--TSVGNSLCSLYSTCGSLN 227
G P ++ L+ACS + GK + K T+D T + L G
Sbjct: 398 GQSPDSIAFVAILSACSHSGLLNEGK----FYFKQMTDDYKITPIIEHFACLVDLLGRSG 453
Query: 228 SAIKAFNRIRE----KNVMSWTTVIGAC 251
+A+N I++ N W ++ +C
Sbjct: 454 RVDEAYNIIKQMPMKPNERVWGALLSSC 481
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 321/575 (55%), Gaps = 14/575 (2%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ +V T L+N+Y K G + +A++VFD +P+ N SW+++++GY E A +F ML
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 168 EAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
E + + TA L+A S + +G+Q+H +VK D SV NSL ++Y+ G +
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+A F RE+N ++W+ +I +NGEA + FS+M + G P EFT + +
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ +L VG Q H L +KLG+ + V+++++ +Y KCG + +A++ FD + V++V W
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391
Query: 347 AMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
AM++GH Q NG EAL+++++++ G+ P T +S L C+ + ALE
Sbjct: 392 AMVSGHVQ------------NGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 439
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+H +K G VG+AL MY KCG +E VF + R +I+W S+I+GF+
Sbjct: 440 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 499
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ + AL LFE+M + G P+ +TF+ L ACS+ G+V YF +M K+Y + P +
Sbjct: 500 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 559
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
DHY C++D+ R G ++EA DFI+ + + +W + + CR + ++G YA E+L++
Sbjct: 560 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLME 619
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L D +Y +L +I+ S +W DV V++L R +++ SW+ + +V+ F +
Sbjct: 620 LGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQ 679
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
HP++ I L L + K GY +E
Sbjct: 680 QHPEAENINAQLRRLAKHMKDEGYHSSSKLSFDEE 714
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 252/558 (45%), Gaps = 58/558 (10%)
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN--MEEAQKVFDNLPRI--NVVSWTSLI 147
+ E +HA +K+G+ V L+N Y + A VFD++P +V SW SL+
Sbjct: 30 HGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLL 89
Query: 148 SGYVQNSQPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
+ + +P A+ F ML + P+ + A TA + S G HA K +
Sbjct: 90 NP-LSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 207 E-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ V SL ++Y G ++ A + F+ + ++N SW+T++ + + F
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 266 KMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
ML E + +EF T++ S L L +G Q+H L +K G + V NS++ +Y K
Sbjct: 209 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 268
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSG 383
G + A +F+ N +TW+AMI G+AQ NG + A+S+FS+++++G
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQ------------NGEADSAVSMFSQMHAAG 316
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
P +TF +L S L AL G+Q H L +K GF + V +ALV+MY KCG I A
Sbjct: 317 FTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK 376
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC---- 499
F ++ ++ WT+M++G + +AL L+ M G+ P++ T L AC
Sbjct: 377 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 436
Query: 500 ------------------------SNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLID 533
S +Y G E ++ P D + +I
Sbjct: 437 ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIIS 496
Query: 534 MFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK---LK 587
F + GC A D ++M E P+ + + + C G ++ G+ + K L
Sbjct: 497 GFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLT 556
Query: 588 PKDCESYAMLLDIFVSAG 605
P+ + YA ++DI AG
Sbjct: 557 PR-LDHYACMVDILSRAG 573
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 195/401 (48%), Gaps = 31/401 (7%)
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS--LNSAIKAFNRIRE--KNVMSWTTV 247
R G+ +HA+ +K V NSL + YS+ L +A F+ I ++V SW ++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSL 88
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + RF S + S + P+ + + + S G H+L K+
Sbjct: 89 LNPLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 308 A-SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
A SN+ V S++ +Y K G+V +A+++FDGM N +W+ M+AG+A A
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYA-----------AE 197
Query: 367 NGGTEALSIFS-KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
EA +F L + + +++L+ S + L GEQ+H L +K G L V V
Sbjct: 198 KCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSV 257
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+LV MY K G + A VF R I+W++MITG+A + + A+ +F M AG
Sbjct: 258 ENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 317
Query: 486 RPNQVTFVGALAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGC 540
P + TFVG L A S+ G + +A G + E +I Y+ L+DM+ + GC
Sbjct: 318 TPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQI------YVKSALVDMYAKCGC 371
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYA 579
I +A + ++ +E + V+W+ ++G ++G E L YA
Sbjct: 372 IADAKEGFDQL-YEVDIVLWTAMVSGHVQNGEHEEALTLYA 411
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 335/591 (56%), Gaps = 13/591 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L C L + +H+ VK G Q+ V L+++Y KC +++A ++F+ LPR +
Sbjct: 248 FLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDD 307
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+V+W +ISG VQN + A+ +F DML +G P +VTL + L A + L ++ GK++H
Sbjct: 308 LVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHG 367
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+++ D + ++L +Y C + +A ++ R +V+ +TVI NG + +
Sbjct: 368 YIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEK 427
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L+ F +L + I+PN T+ S+ C ++ +L +G ++H ++ Y V +++M
Sbjct: 428 ALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMD 487
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSK 378
+Y KCG +D + +F MS + VTWN+MI+ +Q NG EAL +F +
Sbjct: 488 MYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQ------------NGEPQEALDLFRQ 535
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+K + T SS L+ C+ L A+ G++IH + +K +D+ +AL++MY KCG
Sbjct: 536 MCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGN 595
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+E A RVF M + +SW S+I+ + H L +++ M G +P+ VTF+ ++A
Sbjct: 596 MELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISA 655
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
C++AG+V E L F+ M KEY I P M+H+ C++D++ R G +++A FI M F+P+
Sbjct: 656 CAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAG 715
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW + CR H N+EL A+++L KL P + Y ++ +I AGRW+ V+ V+ L +
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ K+ + +SW+ + + + F +D HP+S +I+ L L+++ + GY
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGY 826
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 144/505 (28%), Positives = 256/505 (50%), Gaps = 21/505 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T YV ++ C ++S ++H TG D +V + L+ +Y G + +A+
Sbjct: 139 PDAHTLPYV--VKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDAR 196
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
FD +P + V W ++ GY++ A+ +F +M +G P TL L+ C++
Sbjct: 197 DAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEA 256
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G Q+H+ VK E + +V N+L S+Y+ C L+ A + F + ++++W +I
Sbjct: 257 DLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMIS 316
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
C +NG + L F ML G +P+ TL S+ + L+ G +VH I+
Sbjct: 317 GCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHM 376
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ + ++++ +Y KC V A+ L+D +++V + +I+G+ NG
Sbjct: 377 DAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVL------------NGM 424
Query: 370 TE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+E AL +F L +KP+ T +S+L C+ + AL G++IH L+ + V +A
Sbjct: 425 SEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESA 484
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY KCGR++ + +F +MS + ++W SMI+ F+ + +AL LF M + G++ N
Sbjct: 485 LMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYN 544
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VT AL+AC++ +Y ++ K IK + LIDM+ + G +E A +
Sbjct: 545 NVTISSALSACASLPAIYYGKEIHGVIIKG-PIKADIFAESALIDMYAKCGNMELA---L 600
Query: 549 KKMDFEP--NEVIWSVFIAGCRRHG 571
+ +F P NEV W+ I+ HG
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHG 625
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 217/389 (55%), Gaps = 12/389 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + + VSLL + L + +H +I++ H D F+++ LV++Y KC +
Sbjct: 334 MLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRD 393
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ A+ ++D I+VV +++ISGYV N E A+ +F +LE P VT+ + L A
Sbjct: 394 VRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPA 453
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+S+ ++ LG++IH YV++ E V ++L +Y+ CG L+ + F+++ K+ ++W
Sbjct: 454 CASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTW 513
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I + +NGE + L F +M EGI+ N T++S S C ++ ++ G ++H + IK
Sbjct: 514 NSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIK 573
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+++ ++++ +Y KCG ++ A ++F+ M N V+WN++I+ +
Sbjct: 574 GPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG----------- 622
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
AH E++S ++ G KPD TF ++++ C+ +E+G Q+ K ++ +
Sbjct: 623 AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRM 682
Query: 425 VGTA-LVNMYKKCGRIERASRVFVEMSTR 452
A +V++Y + GR+++A + +M +
Sbjct: 683 EHFACMVDLYSRSGRLDKAIQFIADMPFK 711
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 156/328 (47%), Gaps = 19/328 (5%)
Query: 182 LTACSSLESIRLGKQIHAYVV---KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN---R 235
L C S + LG QIHA V + ++ L +Y A+ F+ R
Sbjct: 39 LRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPR 98
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLR 293
+ + W +I G + F+ KM + P+ TL + C + ++
Sbjct: 99 AAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVS 158
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G VH G AS++ V ++++ +Y GL+ +A+ FDGM + V WN M+ G+
Sbjct: 159 LGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYI 218
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ D+ GG A+ +F + SG +P+ T + L++C+ L G Q+H+L
Sbjct: 219 KAGDV---------GG--AVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSL 267
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K G +V V L++MY KC ++ A R+F + L++W MI+G + L +A
Sbjct: 268 AVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEA 327
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSN 501
L LF DML +G RP+ VT V L A ++
Sbjct: 328 LGLFCDMLRSGARPDSVTLVSLLPALTD 355
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/640 (31%), Positives = 354/640 (55%), Gaps = 17/640 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
G + ++ SL+ C + S+ IH+ +++ V+ LVN+Y G + +
Sbjct: 542 HGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSD 601
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ +F N+ R +++SW ++IS YVQN A+ + P ++T +AL ACSS
Sbjct: 602 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 661
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
++ GK +HA V++ + + VGNSL ++Y C S+ A K F + +++S+ +
Sbjct: 662 PGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVL 721
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLG 306
IG + + ++ FS M S GI+PN T+ +I + L G +H+ I+ G
Sbjct: 722 IGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTG 781
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ S+ V NS++ +Y KCG ++ + +F+ +++ N+V+WNA+IA + Q+
Sbjct: 782 FLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL----------- 830
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EAL +F + +G K D + L+ C+ L +LE+G Q+H L +K+G SD V
Sbjct: 831 GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVV 890
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
A ++MY KCG+++ +V + + R W ++I+G+A + +A + F+ M+ G +
Sbjct: 891 NAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRK 950
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ VTFV L+ACS+AG+V + + Y+ M + + P + H +C++D+ RLG EA
Sbjct: 951 PDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEK 1010
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
FI++M PN++IW ++ R H N+E+G A++LL+L P D +Y +L +++ + R
Sbjct: 1011 FIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNAR 1070
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
W DV +++ + +++ SW+++K++V +F D H + +I+ LDE++ K +
Sbjct: 1071 WADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLRE 1130
Query: 667 FGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNTP 701
GY S L TDEE HSEKLA+A+GL+ P
Sbjct: 1131 VGYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVP 1170
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 265/530 (50%), Gaps = 40/530 (7%)
Query: 70 PKVQTSSYV--SLLQECVNR---KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
P V S + SL+ C R + ++ IHA + G + ++ T L+++YG G
Sbjct: 337 PGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGI 396
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV-TLGTALT 183
+ +AQ++F +P NVVSWT+L+ N E A+ + M G P N T ++
Sbjct: 397 VSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG-VPCNANAFATVVS 455
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
C SLE+ G Q+ + V+ ++ SV NSL +++ G ++ A K F+R+ E + +S
Sbjct: 456 LCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTIS 515
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +I G + FS M G++P+ TL S+ SVC + G+ +HSL +
Sbjct: 516 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 575
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ S++ V N+++ +Y G + +A+ LF MS +L++WN MI+ + Q +
Sbjct: 576 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN------ 629
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
T+AL +L + P+ TFSS L CS AL G+ +HA+ L+ ++
Sbjct: 630 -----STDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL 684
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+VG +L+ MY KC +E A +VF M T ++S+ +I G+A +A+Q+F M A
Sbjct: 685 LVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSA 744
Query: 484 GVRPNQVTFV---GALAACSNAGMVYEALGYFEMMQKEYKIKP--VMDHYMC--LIDMFV 536
G++PN +T + G+ A+ ++ L + Y I+ + D Y+ LI M+
Sbjct: 745 GIKPNYITMINIHGSFASSND-------LHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 797
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+ G +E + + + N V W+ IA N++LG E+ LKL
Sbjct: 798 KCGNLESSTNIFNSIT-NKNIVSWNAIIA-----ANVQLGH--GEEALKL 839
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 139/527 (26%), Positives = 262/527 (49%), Gaps = 34/527 (6%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G +++ +++ C + ++ + + ++ +G V L+ ++G G + +
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+K+FD + + +SW ++IS Y VF DM G P TL + ++ C+S
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ G IH+ ++ + +V N+L ++YS G L+ A F + ++++SW T+
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 620
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + +N + L+ ++ PN T +S C + +L G VH++ ++L
Sbjct: 621 ISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSL 680
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
NL V NS++ +Y KC +++A+K+F M ++V++N +I G+A + D
Sbjct: 681 QRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLED---------- 730
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSIL-TICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
GT+A+ +FS + S+G+KP+ T +I + S G +HA ++TGFLSD V
Sbjct: 731 -GTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVA 789
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH--QALQLFEDMLLAG 484
+L+ MY KCG +E ++ +F ++ + ++SW ++I AN L H +AL+LF DM AG
Sbjct: 790 NSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIA--ANVQLGHGEEALKLFIDMQHAG 847
Query: 485 VRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRL 538
+ ++V L++C++ GM LG + + Y + M DM+ +
Sbjct: 848 NKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM-------DMYGKC 900
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
G ++E + P + W+ I+G ++G F AE+ K
Sbjct: 901 GKMDEMLQVVPDQAIRPQQC-WNTLISGYAKYGY----FKEAEETFK 942
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 190/382 (49%), Gaps = 16/382 (4%)
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-- 188
+FD + +W + +SG V+ A + M E G + L + +TAC
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358
Query: 189 -ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
E I G IHA + + +G +L LY + G ++ A + F + E+NV+SWT +
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 418
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ A NG + LR + +M +G+ N ++ S+CG++ + G QV S I G
Sbjct: 419 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 478
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + V NS++ ++ G V +A+KLFD M + ++WNAMI+ + +H
Sbjct: 479 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMIS------------MYSHQ 526
Query: 368 G-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G ++ +FS + G++PD T S++++C+ G IH+L L++ S V V
Sbjct: 527 GICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVI 586
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
ALVNMY G++ A +F MS R LISW +MI+ + + S AL+ +
Sbjct: 587 NALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNES 646
Query: 487 PNQVTFVGALAACSNAGMVYEA 508
PN +TF AL ACS+ G + +
Sbjct: 647 PNHLTFSSALGACSSPGALIDG 668
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLK---CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
+H L ++L + RN+++ Y + A LFD M+ TW ++G
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSG--- 94
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ---GEQIH 411
+ +D GT A + + G+ + +S++T C R E G IH
Sbjct: 95 CVRCGRD-------GT-AFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 146
Query: 412 ALTLKTGFLSDVVVGTALVNM 432
ALT + G + +V +G AL+++
Sbjct: 147 ALTHRAGLMGNVYIGRALLHL 167
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/575 (32%), Positives = 322/575 (56%), Gaps = 14/575 (2%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ +V T L+N+Y K G + +A+++FD +P+ N SW+++++GY E A +F ML
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 211
Query: 168 EAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
E + + TA L+A S + +G+Q+H +VK D SV NSL ++Y+ G +
Sbjct: 212 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 271
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+A F RE+N ++W+ +I +NGEA + FS+M + G P EFT + +
Sbjct: 272 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 331
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ +L VG Q H L +KLG+ + V+++++ +Y KCG + +A++ FD + V++V W
Sbjct: 332 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 391
Query: 347 AMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
AM++GH Q NG EAL+++++++ G+ P T +S L C+ + ALE
Sbjct: 392 AMVSGHVQ------------NGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 439
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+H +K G VG+AL MY KCG +E VF + R +I+W S+I+GF+
Sbjct: 440 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 499
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ + AL LFE+M + G P+ +TF+ L ACS+ G+V YF +M K+Y + P +
Sbjct: 500 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 559
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
DHY C++D+ R G ++EA DFI+ + + +W + + CR + ++G YA E+L++
Sbjct: 560 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLME 619
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L +D +Y +L +I+ S +W DV V++L R +++ SW+ + +V+ F +
Sbjct: 620 LGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQ 679
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
HP++ I L L + K GY +E
Sbjct: 680 QHPEAENINAQLRRLAKHMKDEGYHSSSKLSFDEE 714
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 152/558 (27%), Positives = 252/558 (45%), Gaps = 58/558 (10%)
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN--MEEAQKVFDNLPRI--NVVSWTSLI 147
+ E +HA +K+G+ V L+N Y + A VFD++P +V SW SL+
Sbjct: 30 HGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLL 89
Query: 148 SGYVQNSQPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
+ + +P A+ F ML + P+ + A TA + S G HA K +
Sbjct: 90 NP-LSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 207 E-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ V SL ++Y G ++ A + F+ + ++N SW+T++ + + F
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR 208
Query: 266 KMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
ML E + +EF T++ S L L +G Q+H L +K G + V NS++ +Y K
Sbjct: 209 LMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKA 268
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSG 383
G + A +F+ N +TW+AMI G+AQ NG + A+S+FS+++++G
Sbjct: 269 GCMGAAFHVFESSRERNSITWSAMITGYAQ------------NGEADSAVSMFSQMHAAG 316
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
P +TF +L S L AL G+Q H L +K GF + V +ALV+MY KCG I A
Sbjct: 317 FTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAK 376
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC---- 499
F ++ ++ WT+M++G + +AL L+ M G+ P++ T L AC
Sbjct: 377 EGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIA 436
Query: 500 ------------------------SNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLID 533
S +Y G E ++ P D + +I
Sbjct: 437 ALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIIS 496
Query: 534 MFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK---LK 587
F + GC A D ++M E P+ + + + C G ++ G+ + K L
Sbjct: 497 GFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLT 556
Query: 588 PKDCESYAMLLDIFVSAG 605
P+ + YA ++DI AG
Sbjct: 557 PR-LDHYACMVDILSRAG 573
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 195/401 (48%), Gaps = 31/401 (7%)
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS--LNSAIKAFNRIRE--KNVMSWTTV 247
R G+ +HA+ +K V NSL + YS+ L +A F+ I ++V SW ++
Sbjct: 29 RHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSL 88
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ + RF S + S + P+ + + + S G H+L K+
Sbjct: 89 LNPLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPS 148
Query: 308 A-SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
A SN+ V S++ +Y K G+V +A+++FDGM N +W+ M+AG+A A
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYA-----------AE 197
Query: 367 NGGTEALSIFS-KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
EA +F L + + +++L+ S + L GEQ+H L +K G L V V
Sbjct: 198 KCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSV 257
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+LV MY K G + A VF R I+W++MITG+A + + A+ +F M AG
Sbjct: 258 ENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGF 317
Query: 486 RPNQVTFVGALAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGC 540
P + TFVG L A S+ G + +A G + E +I Y+ L+DM+ + GC
Sbjct: 318 TPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQI------YVKSALVDMYAKCGC 371
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYA 579
I +A + ++ +E + V+W+ ++G ++G E L YA
Sbjct: 372 IADAKEGFDQL-YEVDIVLWTAMVSGHVQNGEHEEALTLYA 411
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 354/639 (55%), Gaps = 17/639 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ SL+ C + S+ IH+ +++ V+ LVN+Y G + +A
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +F N+ R +++SW ++IS YVQN A+ + P ++T +AL ACSS
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSP 360
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ GK +HA V++ + + VGNSL ++Y C S+ A K F + +++S+ +I
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLI 420
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLGY 307
G + + ++ FS M S GI+PN T+ +I + L G +H+ I+ G+
Sbjct: 421 GGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGF 480
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+ V NS++ +Y KCG ++ + +F+ +++ N+V+WNA+IA + Q+
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL-----------G 529
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EAL +F + +G K D + L+ C+ L +LE+G Q+H L +K+G SD V
Sbjct: 530 HGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 589
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
A ++MY KCG+++ +V + + R W ++I+G+A + +A + F+ M+ G +P
Sbjct: 590 AAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKP 649
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTFV L+ACS+AG+V + + Y+ M + + P + H +C++D+ RLG EA F
Sbjct: 650 DYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKF 709
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I++M PN++IW ++ R H N+E+G A++LL+L P D +Y +L +++ + RW
Sbjct: 710 IEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARW 769
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
DV +++ + +++ SW+++K++V +F D H + +I+ LDE++ K +
Sbjct: 770 ADVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREV 829
Query: 668 GYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNTP 701
GY S L TDEE HSEKLA+A+GL+ P
Sbjct: 830 GYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVP 868
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/519 (29%), Positives = 261/519 (50%), Gaps = 38/519 (7%)
Query: 79 SLLQECVNR---KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
SL+ C R + ++ IHA + G + ++ T L+++YG G + +AQ++F +
Sbjct: 46 SLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEM 105
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT-LGTALTACSSLESIRLG 194
P NVVSWT+L+ N E A+ + M G P N T ++ C SLE+ G
Sbjct: 106 PERNVVSWTALMVALSSNGYLEEALRAYRQMRRDG-VPCNANAFATVVSLCGSLENEVPG 164
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+ + V+ ++ SV NSL +++ G ++ A K F+R+ E + +SW +I
Sbjct: 165 LQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQ 224
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + FS M G++P+ TL S+ SVC + G+ +HSL ++ S++ V
Sbjct: 225 GICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVI 284
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y G + +A+ LF MS +L++WN MI+ + Q + T+AL
Sbjct: 285 NALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN-----------STDALK 333
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+L + P+ TFSS L CS AL G+ +HA+ L+ +++VG +L+ MY
Sbjct: 334 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 393
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV- 493
KC +E A +VF M T ++S+ +I G+A +A+Q+F M AG++PN +T +
Sbjct: 394 KCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMIN 453
Query: 494 --GALAACSNAGMVYEALGYFEMMQKEYKIKP--VMDHYMC--LIDMFVRLGCIEEAFDF 547
G+ A+ ++ L + Y I+ + D Y+ LI M+ + G +E + +
Sbjct: 454 IHGSFASSND-------LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNI 506
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+ N V W+ IA N++LG E+ LKL
Sbjct: 507 FNSIT-NKNIVSWNAIIA-----ANVQLGH--GEEALKL 537
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 187/371 (50%), Gaps = 16/371 (4%)
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ESIRLGKQIH 198
+W + +SG V+ + A + M E G + L + +TAC E I G IH
Sbjct: 8 TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIH 67
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
A + + +G +L LY + G ++ A + F + E+NV+SWT ++ A NG
Sbjct: 68 ALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLE 127
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ LR + +M +G+ N ++ S+CG++ + G QV S I G + + V NS++
Sbjct: 128 EALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLI 187
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFS 377
++ G V +A+KLFD M + ++WNAMI+ + +H G ++ +FS
Sbjct: 188 TMFGNLGRVHDAEKLFDRMEEHDTISWNAMIS------------MYSHQGICSKCFLVFS 235
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ G++PD T S++++C+ G IH+L L++ S V V ALVNMY G
Sbjct: 236 DMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A +F MS R LISW +MI+ + + S AL+ + PN +TF AL
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 355
Query: 498 ACSNAGMVYEA 508
ACS+ G + +
Sbjct: 356 ACSSPGALIDG 366
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 321/575 (55%), Gaps = 14/575 (2%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ +V T L+N+Y K G + +A++VFD +P+ N SW+++++GY E A +F ML
Sbjct: 46 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLML 105
Query: 168 EAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
E + + TA L+A S + +G+Q+H +VK D SV NSL ++Y+ G +
Sbjct: 106 EECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCM 165
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+A F RE+N ++W+ +I +NGEA + FS+M + G P EFT + +
Sbjct: 166 GAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNAS 225
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
+ +L VG Q H L +KLG+ + V+++++ +Y KCG + +A++ FD + V++V W
Sbjct: 226 SDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWT 285
Query: 347 AMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
AM++GH Q NG EAL+++++++ G+ P T +S L C+ + ALE
Sbjct: 286 AMVSGHVQ------------NGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 333
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
G+Q+H +K G VG+AL MY KCG +E VF + R +I+W S+I+GF+
Sbjct: 334 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 393
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
+ + AL LFE+M + G P+ +TF+ L ACS+ G+V YF +M K+Y + P +
Sbjct: 394 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 453
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
DHY C++D+ R G ++EA DFI+ + + +W + + CR + ++G YA E+L++
Sbjct: 454 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLME 513
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L D +Y +L +I+ S +W DV V++L R +++ SW+ + +V+ F +
Sbjct: 514 LGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVGEQ 573
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
HP++ I L L + K GY +E
Sbjct: 574 QHPEAENINAQLRRLAKHMKDEGYHSSSKLSFDEE 608
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 31/387 (8%)
Query: 80 LLQECVNRKS----------------LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
+L+EC + KS L E +H IVK G V LV +Y K G
Sbjct: 104 MLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAG 163
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
M A VF++ N ++W+++I+GY QN + + A+ +F M AG PT T L
Sbjct: 164 CMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLN 223
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
A S L ++ +GKQ H +VK E V ++L +Y+ CG + A + F+++ E +++
Sbjct: 224 ASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVL 283
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
WT ++ +NGE + L +++M EGI P++ T+ S C + +L G Q+H+ +
Sbjct: 284 WTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIV 343
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K G V +++ +Y KCG +++ +F + +++ WN++I+G +Q
Sbjct: 344 KYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQ--------- 394
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLS 421
NG G AL +F ++ G PD TF +IL CS + +++G + +L K G
Sbjct: 395 ---NGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTP 451
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVE 448
+ +V++ + G ++ A + F+E
Sbjct: 452 RLDHYACMVDILSRAGMLKEA-KDFIE 477
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 143/264 (54%), Gaps = 1/264 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++V +L + +L+ + H +VK G +V + LV++Y KCG + +A++ FD L
Sbjct: 217 TFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQL 276
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+++V WT+++SG+VQN + E A+ ++ M + G P+ T+ + L AC+ + ++ GK
Sbjct: 277 YEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGK 336
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+H +VKY VG++L ++YS CG+L + F RI +++V++W ++I +NG
Sbjct: 337 QLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNG 396
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVR 314
L F +M EG P+ T +I C M + G + SL K G L
Sbjct: 397 CGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHY 456
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMS 338
++ + + G++ EA+ + ++
Sbjct: 457 ACMVDILSRAGMLKEAKDFIESIT 480
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 153/288 (53%), Gaps = 23/288 (7%)
Query: 299 HSLGIKLGYA-SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
H+L K+ A SN+ V S++ +Y K G+V +A+++FDGM N +W+ M+AG+A
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYA---- 89
Query: 358 LAKDDLSAHNGGTEALSIFS-KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
A EA +F L + + +++L+ S + L GEQ+H L +K
Sbjct: 90 -------AEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVK 142
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
G L V V +LV MY K G + A VF R I+W++MITG+A + + A+ +
Sbjct: 143 DGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSM 202
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLID 533
F M AG P + TFVG L A S+ G + A+G + M++ ++++ + L+D
Sbjct: 203 FSQMHAAGFTPTEFTFVGVLNASSDLGAL--AVGKQAHGLMVKLGFEVQIYVKS--ALVD 258
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYA 579
M+ + GCI +A + ++ +E + V+W+ ++G ++G E L YA
Sbjct: 259 MYAKCGCIADAKEGFDQL-YEVDIVLWTAMVSGHVQNGEHEEALTLYA 305
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL++ EG S+ S L+ C +L + +H IVK G V + L
Sbjct: 298 EEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSAL 357
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+Y KCGN+E+ VF +P +V++W S+ISG+ QN A+ +F +M G P N
Sbjct: 358 STMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDN 417
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T L ACS + + G + + + K Y + + S G L A
Sbjct: 418 ITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIE 477
Query: 235 RIR-EKNVMSWTTVIGAC 251
I + W V+GAC
Sbjct: 478 SITIDHGTCLWRIVLGAC 495
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 8/200 (4%)
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK-TGFLSDVVVGTALVNMYKKCG 437
L+SS + P ++F++ T +R + G HAL K +S+V V T+L+NMY K G
Sbjct: 2 LSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLG 61
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
+ A RVF M R SW++M+ G+A S +A LF ++L + FV
Sbjct: 62 IVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFR-LMLEECPSEKSEFVA--T 118
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC---LIDMFVRLGCIEEAFDFIKKMDFE 554
A +A V L E M ++D L+ M+ + GC+ AF + E
Sbjct: 119 AVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFES-SRE 177
Query: 555 PNEVIWSVFIAGCRRHGNME 574
N + WS I G ++G +
Sbjct: 178 RNSITWSAMITGYAQNGEAD 197
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 320/580 (55%), Gaps = 19/580 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
++L +C +L +R Q+HA + + +V N L +Y G+L A + F+ + ++
Sbjct: 58 SSLLSCRNLFQVR---QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKR 114
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ SW+ ++G + G F ++L G ++++ + C + L+ G +H
Sbjct: 115 HPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIH 174
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ +K G V +++ +Y +C +V++A ++F M +L TW MI
Sbjct: 175 CITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGA-------- 226
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
L+ E+L F ++ + G+ PD +++ C++L A+ + + IHA TG+
Sbjct: 227 ---LAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGY 283
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV++GTA+++MY KCG +E A +F M R +I+W++MI + H +AL+LF
Sbjct: 284 SLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPM 343
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
ML +G+ PN++TFV L ACS+AG++ E +F M EY + P + HY C++D+ R G
Sbjct: 344 MLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG 403
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++EA + I+ M E +EV+W + CR H +++L A LLKL+ + Y +L +
Sbjct: 404 RLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSN 463
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ +AG+WED+A ++L + L + +WI + +K+Y F D HP+S EI+K+L
Sbjct: 464 IYANAGKWEDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKR 523
Query: 660 LVEKAKCFGYKQQESFEL--TDEE--SASVY-HSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L EK + GY + L DEE +Y HSEKLAIAFGLL P PI + K+ +
Sbjct: 524 LGEKLEVAGYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRV 583
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH F K ++ + + IIVRD+KR H F G C+CRD+
Sbjct: 584 CGDCHTFCKFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDY 623
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 215/433 (49%), Gaps = 19/433 (4%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
T + S L C N L +HA I G+ ++ V L+ +Y + G +E+AQ++FD
Sbjct: 53 TKRFRSSLLSCRN---LFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFD 109
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+ + + SW+ ++ GY + +F ++L +G + + + AC L+ ++
Sbjct: 110 GMSKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKC 169
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+ IH +K + V +L +Y+ C + A + F ++ ++++ +WT +IGA E
Sbjct: 170 GRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAE 229
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+G V+ L FF +M ++GI P++ L ++ C + ++ +H+ GY+ ++ +
Sbjct: 230 SGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVIL 289
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+++ +Y KCG V+ A+ +FD M N++TW+AMIA + H G +AL
Sbjct: 290 GTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGY-----------HGQGEKAL 338
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH-ALTLKTGFLSDVVVGTALVNM 432
+F + SG+ P+ TF S+L CS +E+G++ ++ + G DV T +V++
Sbjct: 339 ELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDL 398
Query: 433 YKKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQV 490
+ GR++ A + M + + W +++ H A ++ +L L +P
Sbjct: 399 LGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHY 458
Query: 491 TFVGALAACSNAG 503
+ + A NAG
Sbjct: 459 VLLSNIYA--NAG 469
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + S +++ C + K L +IH +K G FV LV++Y +C
Sbjct: 142 LLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKV 201
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E+A ++F + + ++ +WT +I ++ P ++ F M G P V L T + A
Sbjct: 202 VEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYA 261
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L ++ K IHAY+ D +G ++ +Y+ CGS+ SA F+R++ +NV++W
Sbjct: 262 CAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITW 321
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH-SLGI 303
+ +I A G +G+ + L F ML GI PN T S+ C + G + S+
Sbjct: 322 SAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWD 381
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
+ G +++ ++ L + G +DEA ++ +GM + V W A++
Sbjct: 382 EYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGA 430
>gi|326497609|dbj|BAK05894.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/683 (30%), Positives = 365/683 (53%), Gaps = 24/683 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT-FLVNVYGKCGNMEEAQKVFDNLPRI 138
LL C ++L+ +HA ++ + S +++ L Y + G++ A+ P
Sbjct: 9 LLSSCAALRTLTR---LHALLIVSSSASCHHILSSCLATAYARAGDLAAAESTLATAPTS 65
Query: 139 --NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++ +W +L++ + + + P A+ VF + A P + T AL+AC+ L + G+
Sbjct: 66 PSSIPAWNALLAAHSRGASPHEALRVFRALPPAAR-PDSTTFTLALSACARLGDLATGEV 124
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+ +D V +S+ +LY+ CG+++ A+K F+R+R+++ ++W+T++ G+
Sbjct: 125 VTDRASGAGYGNDIFVCSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQ 184
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
VQ + + +M +G++ +E + + C R+GA VH ++ ++ + S
Sbjct: 185 PVQAIEMYMRMRRDGLEADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTS 244
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y K GL D+A+++F+ M H N V+W+A+I+ AQ + EAL +F
Sbjct: 245 LVDMYAKNGLFDQARRVFELMPHRNDVSWSALISQLAQ-----------YGNADEALGLF 293
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+ SG+ P+ L CS L L+ G+ IH L+T L D +VGTA+++MY KC
Sbjct: 294 RMMQVSGLHPNSGPVVGALLACSDLGLLKLGKSIHGFILRTLEL-DRMVGTAVIDMYSKC 352
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G + A +F ++ +R LISW MI H AL LF++M VRP+ TF L
Sbjct: 353 GSLSSAQMLFDKVVSRDLISWNVMIACCGAHGRGRDALSLFQEMKRNEVRPDHATFASLL 412
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+A S++G+V E +F M EY I+P H +C++D+ R G +EEA + + +P
Sbjct: 413 SALSHSGLVEEGKFWFNCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPT 472
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
I ++GC + +ELG AE++L+L+P D A++ +++ +A W V V+ L
Sbjct: 473 ISILVALLSGCLNNNKLELGESTAEKILELQPGDVGVLALVSNLYAAAKNWYKVREVRKL 532
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
++ + S I I+ +++F D HPQ +I +++ +L + + GY + F
Sbjct: 533 MKDHGSKKAPGCSSIEIRGALHTFVMEDQSHPQHRQILQMVMKLDSEMRKMGYIPKTEFV 592
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
D +E HSE+LA AFGLLNT + ++V+K+ +C DCH+ IK ++ + R
Sbjct: 593 YHDLEEGVKEQLLSRHSERLATAFGLLNTSPGTRLVVIKNLRVCGDCHDAIKYMSKIADR 652
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EI+VRD+KR H F +G C+C D+
Sbjct: 653 EIVVRDAKRFHHFKDGACSCGDY 675
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 218/453 (48%), Gaps = 24/453 (5%)
Query: 55 RSLGFQEALSVLTEGP---KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
R EAL V P + ++++ L C L+ E++ G D FV
Sbjct: 81 RGASPHEALRVFRALPPAARPDSTTFTLALSACARLGDLATGEVVTDRASGAGYGNDIFV 140
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+ ++N+Y KCG M++A KVFD + + + V+W+++++G+V QP AI +++ M G
Sbjct: 141 CSSVLNLYAKCGAMDDAVKVFDRMRKRDRVTWSTMVTGFVNAGQPVQAIEMYMRMRRDGL 200
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
V + + AC++ R+G +H Y++++ + D + SL +Y+ G + A +
Sbjct: 201 EADEVVIVGVMQACAATGDARMGASVHGYLLRHAMQMDVVISTSLVDMYAKNGLFDQARR 260
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F + +N +SW+ +I + G A + L F M G+ PN + C +
Sbjct: 261 VFELMPHRNDVSWSALISQLAQYGNADEALGLFRMMQVSGLHPNSGPVVGALLACSDLGL 320
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
L++G +H ++ + V +++ +Y KCG + AQ LFD + +L++WN MIA
Sbjct: 321 LKLGKSIHGFILRTLELDRM-VGTAVIDMYSKCGSLSSAQMLFDKVVSRDLISWNVMIAC 379
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QI 410
AH G +ALS+F ++ + ++PD TF+S+L+ S +E+G+
Sbjct: 380 -----------CGAHGRGRDALSLFQEMKRNEVRPDHATFASLLSALSHSGLVEEGKFWF 428
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ + + G +V++ + G +E A+ + + ++ I S++ + L+
Sbjct: 429 NCMVNEYGIEPGEKHLVCIVDLLARSGLVEEANGLVASLHSKPTI---SILVALLSGCLN 485
Query: 471 HQALQLFEDML--LAGVRPNQVTFVGALAACSN 501
+ L+L E + ++P VG LA SN
Sbjct: 486 NNKLELGESTAEKILELQPGD---VGVLALVSN 515
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/592 (34%), Positives = 328/592 (55%), Gaps = 25/592 (4%)
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL---CSLYSTCGSLNS 228
YP+ +L + L C+SL+ + KQI A+ +K ++D + L C+ T S++
Sbjct: 25 YPS--SLLSCLPKCTSLKEL---KQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDY 79
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F I + +++ + ++ + ++ + F K L+ + P+++T S+ C
Sbjct: 80 AHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVV 139
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ + G Q+H L IKLG N V +++ +Y C VD AQ++FD + +V++NA+
Sbjct: 140 AKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAI 199
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+A+ + EALS+F +L + +KP+ T S+L+ C+ L AL+ G+
Sbjct: 200 ITGYAR-----------SSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGK 248
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH K G V V TAL++MY KCG ++ A VF MS R +W++MI +A H
Sbjct: 249 WIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHG 308
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ +FE+M A V+P+++TF+G L ACS+ G+V E YF M + Y I P + HY
Sbjct: 309 QGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHY 368
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G + EA+ FI ++ +P ++W ++ C HGN+EL Q+L+L
Sbjct: 369 GCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQILELDD 428
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
Y +L ++ AG+WEDV ++ L + + S I + + V+ F DG+H
Sbjct: 429 SHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPGCSSIEVDNVVHEFFSGDGVHY 488
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESF----ELTDEESASV--YHSEKLAIAFGLLNTPI 702
S + + LDELV++ K GY S ++ DEE YHSEKLAI+FGLLNTP
Sbjct: 489 VSTALHRALDELVKELKSVGYVPDTSLVVHPDMEDEEKEITLRYHSEKLAISFGLLNTPP 548
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I VVK+ +C DCH+ K+I+SL REII+RD +R H F +G C+C D+
Sbjct: 549 GTTIRVVKNLRVCGDCHSAAKLISSLIDREIILRDVQRFHHFKDGKCSCGDY 600
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 205/412 (49%), Gaps = 19/412 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK---CGNMEEAQKV 131
SS +S L +C + K L I A +KT D ++T L+N + +M+ A ++
Sbjct: 27 SSLLSCLPKCTSLKELKQ---IQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQL 83
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
F+ +P+ ++V + S+ GY +++ P AI +F+ L P + T + L AC ++
Sbjct: 84 FEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAF 143
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ GKQ+H +K ++ V +L ++Y+ C ++ A + F+ I E V+S+ +I
Sbjct: 144 QQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGY 203
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+ + L F ++ + ++PN+ T+ S+ S C + +L +G +H K G +
Sbjct: 204 ARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYV 263
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+V +++ +Y KCG +D A +F+ MS + W+AMI +A H G +
Sbjct: 264 KVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAM-----------HGQGQD 312
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALV 430
+S+F ++ + ++PD TF +L CS +++G ++++ G + + +V
Sbjct: 313 VMSMFEEMARAKVQPDEITFLGLLYACSHTGLVDEGFRYFYSMSEVYGIIPGIKHYGCMV 372
Query: 431 NMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDML 481
++ + G + A + E+ + T I W ++++ ++H A Q+ +L
Sbjct: 373 DLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQIL 424
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/651 (31%), Positives = 344/651 (52%), Gaps = 28/651 (4%)
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLE 189
VF +P + L+ ++S PE I ++ ++ + + + + L A S +
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G +IH K DD + L ++Y++C + A F+++ + ++W +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+NG LR F M S ++P+ L ++ S CG +L G +H GYA
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD-------- 361
+ ++ +++ +Y CG +D A+K++DG+S +L+ AM++G+A++ + KD
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKL-GMVKDARFIFDQM 314
Query: 362 ---DL---SAHNGG-------TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
DL SA G EAL +F ++ PD T S+++ CS + AL Q
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH ++GF + V AL++MY KCG + +A VF M + +ISW+SMI FA H
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ A++LF M + PN VTF+G L AC +AG+V E F M E+ I P +HY
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D++ R + +A + I+ M F PN +IW ++ C+ HG ELG +AA++LL+L+P
Sbjct: 495 GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEP 554
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ +L +I+ RW DV +++ + +S+ S I I ++V+ F D H
Sbjct: 555 DHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHK 614
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIV 703
QS EI++ LDE+V K K GYK S E D++ ++HSEKLA+ +GL++
Sbjct: 615 QSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNE 674
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
S I +VK+ +C DCH+F+K+++ + EI+VRD R H G C+CRD+
Sbjct: 675 SCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDY 725
>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Brachypodium distachyon]
Length = 647
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 322/603 (53%), Gaps = 49/603 (8%)
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+I L +Q+HA+ D N+L Y+ G L +A F I ++NVMSW +I
Sbjct: 56 RAIPLLRQLHAFAATSGAAADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILI 115
Query: 249 GACGENGE---------------------AVQGL----------RFFSKMLSEGIQPNEF 277
G C +NG+ V GL +FF M EG+ P+EF
Sbjct: 116 GGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEF 175
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
L S+ C +L + G QVH+ ++ G S++ V NS+ ++Y++CG + E + + +
Sbjct: 176 GLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRAL 235
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILT 396
+ +V++N IAG Q NG +E AL FS + + PD+ TF S ++
Sbjct: 236 PSLTIVSFNTTIAGRTQ------------NGDSEGALEYFSMMRGVEVAPDVVTFVSAIS 283
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS 456
CS L AL QG+Q+HA +K G V V T+LV+MY +CG + + RV+ L
Sbjct: 284 CCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFL 343
Query: 457 WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ 516
++MI+ H H+A++LF+ M+ G PN+VTF+ L ACS++G+ E L +FE+M
Sbjct: 344 LSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMT 403
Query: 517 KEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
K Y +P + HY C++D+ R GC++EA I M + VIW ++ C+ N ++
Sbjct: 404 KTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMA 463
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDK 636
AE++++ P+D Y +L +I ++ RW DV V+ + RE+ + + SW+ K +
Sbjct: 464 ERIAERVIESDPRDSAPYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQ 523
Query: 637 VYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF---ELTDEES--ASVYHSEKL 691
V+ F D HP+ EI + L E++ K + GY + ++ DEE + +HSEKL
Sbjct: 524 VHQFCTGDKSHPRQGEIDEYLKEMMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKL 583
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
AIAF LN P PI V+K+ +C DCH IK+I+ +T REI+VRD R H F +G C+C
Sbjct: 584 AIAFAFLNLPEGVPIRVMKNLRVCDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSC 643
Query: 752 RDF 754
D+
Sbjct: 644 GDY 646
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 180/366 (49%), Gaps = 13/366 (3%)
Query: 99 HIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL 158
H+ + S ++ L+ K G++ A+++FD +P NV +W ++++G E
Sbjct: 98 HLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRNVATWNAMVAGLTNVGLDED 157
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
++ FL M G +P LG+ C+ L + G+Q+HAYVV+ + D VGNSL
Sbjct: 158 SLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAH 217
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y CG L + ++S+ T I +NG++ L +FS M + P+ T
Sbjct: 218 MYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVT 277
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
S S C + +L G QVH+ IK G + V S++++Y +CG + ++++++DG
Sbjct: 278 FVSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYC 337
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
++L +AMI+ H G +A+ +F ++ + G +P+ TF ++L C
Sbjct: 338 GLDLFLLSAMISA-----------CGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYAC 386
Query: 399 SRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LIS 456
S ++G + L KT GF V +V++ + G ++ A + + M R +
Sbjct: 387 SHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVI 446
Query: 457 WTSMIT 462
W ++++
Sbjct: 447 WKTLLS 452
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 2/294 (0%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
Q L++ EG S+ + C + + +HA++V++G D V L ++
Sbjct: 159 LQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHM 218
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y +CG + E + V LP + +VS+ + I+G QN E A+ F M P VT
Sbjct: 219 YMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTF 278
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+A++ CS L ++ G+Q+HA V+K + V SL +YS CG L + + ++
Sbjct: 279 VSAISCCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCG 338
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++ + +I ACG +G+ + + F +M++ G +PNE T ++ C G +
Sbjct: 339 LDLFLLSAMISACGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEF 398
Query: 299 HSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
L K G+ +++ N I+ L + G +DEA+ L M + V W +++
Sbjct: 399 FELMTKTYGFQPSVKHYNCIVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLS 452
>gi|125532805|gb|EAY79370.1| hypothetical protein OsI_34497 [Oryza sativa Indica Group]
Length = 681
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 332/611 (54%), Gaps = 20/611 (3%)
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ + P A+ VF + A P + T AL+AC+ L +R G+ + +DD
Sbjct: 84 HSRRGSPASALRVFRALPPAAR-PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V +SL LY+ G++ A+K F+R+ ++ ++W+T++ G+ + ++ + +M
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+G++ +E + + C ++R+GA VH ++ G ++ S++ +Y K GL+D
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDL 388
A ++F M H N V+W+AMI+G AQ NG + EAL +F + +SG++PD
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQ------------NGQSDEALRLFRNMQASGIQPDS 310
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
S L CS + L+ G +H ++ F + ++GTA ++MY KCG + A +F
Sbjct: 311 GALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNM 369
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+S R LI W +MI H AL LF++M G+RP+ TF L+A S++G+V E
Sbjct: 370 ISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEG 429
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+F M +KI P HY+CL+D+ R G +EEA D + M EP IW ++GC
Sbjct: 430 KLWFGCMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCL 489
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ +ELG A+ +L+L+P D A++ +++ + +W+ V V+ L ++ +
Sbjct: 490 NNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGC 549
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
S I I+ ++F D HPQ EI + +L + + GY + F D +E
Sbjct: 550 SSIEIRGTRHAFLMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQ 609
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
YHSEKLAIAFGLLNT + ++++K+ +C DCH+ IK I+ + REI+VRD+KR H
Sbjct: 610 LSYHSEKLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHH 669
Query: 744 FVNGHCTCRDF 754
F +G C+CRD+
Sbjct: 670 FKDGVCSCRDY 680
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 233/460 (50%), Gaps = 26/460 (5%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L + ++++ L C L E + G D FV + L+++Y + G M
Sbjct: 100 LPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAM 159
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A KVFD +PR + V+W+++++G+V QP AI ++ M E G V + + AC
Sbjct: 160 GDAVKVFDRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQAC 219
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ ++R+G +H +++++ D SL +Y+ G L+ A + F + +N +SW+
Sbjct: 220 TAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWS 279
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I +NG++ + LR F M + GIQP+ L S C + L++G VH ++
Sbjct: 280 AMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR 339
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ N + + + +Y KCG + AQ LF+ +S +L+ WNAMIA A
Sbjct: 340 -FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIAC-----------CGA 387
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
H G +AL++F ++N +GM+PD TF+S+L+ S +E+G+ + ++
Sbjct: 388 HGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGCMVNHFKITPAEK 447
Query: 426 G-TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDML-- 481
LV++ + G +E AS + M ++ W ++++G L+++ L+L E +
Sbjct: 448 HYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG----CLNNKKLELGESIADN 503
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ ++P+ VG LA SN +Y A ++ +++ K+
Sbjct: 504 ILELQPDD---VGVLALVSN---LYAATKKWDKVRQVRKL 537
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/594 (31%), Positives = 323/594 (54%), Gaps = 13/594 (2%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+L G ++ S+++ C + + +HAH++K+ L+++Y K
Sbjct: 153 FQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKS 212
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
+ +A VF + +++SW S+I+G+ Q A+ F +ML G Y P G+
Sbjct: 213 NLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSV 272
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ACSSL G+Q+H +K+ D G SLC +Y+ CG L+ A F +I ++
Sbjct: 273 FSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDL 332
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W +I G+A + + FFS+M +G+ P+E T+ S+ C + L G QVH
Sbjct: 333 VAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGY 392
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAK 360
K+G ++ V N+++ +Y KC + +A F+ M + +LV+WNA++ +
Sbjct: 393 INKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMR------ 446
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H+ E + + S +PD T +++L + V++E G Q+H LKTG
Sbjct: 447 -----HDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLN 501
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
D V L+++Y KCG ++ A ++F M ++SW+S+I G+A +AL+LF+ M
Sbjct: 502 CDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTM 561
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
V+PN VTFVG L ACS+ G+V E + M+KE+ I P +H C++D+ R GC
Sbjct: 562 RRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGC 621
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ EA FI +M F+P+ V+W +A C+ HGN+++G AAE +LK+ P + ++ +L +I
Sbjct: 622 LNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNI 681
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+ S G WEDVA +++L ++ + + SWI +KD+++ F D LHP+ +I+
Sbjct: 682 YASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIY 735
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/569 (30%), Positives = 286/569 (50%), Gaps = 50/569 (8%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S+Y L+ C +SL + + IH H++K+ SH D + ++N+YGKC ++++AQKVFD
Sbjct: 64 STYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDA 123
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+P NVVSWTS+I+GY QN Q A+ + ML++G P T G+ + ACSSL I LG
Sbjct: 124 MPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLG 183
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+HA+V+K + N+L S+Y+ + A+ F+R+ ++++SW ++I +
Sbjct: 184 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 243
Query: 255 GEAVQGLRFFSKMLSEGIQ-PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G ++ L +F +ML +G+ PNEF S+ S C ++L G Q+H + IK G ++
Sbjct: 244 GYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFA 303
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
S+ +Y KCGL+ A+ +F + +LV WNA+IAG A D EA+
Sbjct: 304 GCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGD-----------AKEAI 352
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+ FS++ G+ PD T S+L C+ L QG Q+H K G DV V L+ MY
Sbjct: 353 AFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMY 412
Query: 434 KKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
KC + A F EM L+SW +++T H + + +L + M ++ RP+ +T
Sbjct: 413 AKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITL 472
Query: 493 VGALAACSNA--------------------------GMV--YEALGYFEMMQKEYK--IK 522
L A + G++ Y G + K + I
Sbjct: 473 TNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMIN 532
Query: 523 PVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG--- 576
P + + LI + + G EEA F ++++D +PN V + + C G +E G
Sbjct: 533 PDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKL 592
Query: 577 FYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ E+ + P E + ++D+ AG
Sbjct: 593 YGTMEKEFGIAPTR-EHCSCMVDLLARAG 620
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 9/205 (4%)
Query: 371 EALSIFSKLNS-SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ F L +G L T++ +++ CS L +LE G++IH LK+ D+ + +
Sbjct: 45 EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+NMY KC ++ A +VF M R ++SWTS+I G++ + AL+ + ML +GV P+Q
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164
Query: 490 VTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
TF + ACS+ G + LG + +++ E+ + + LI M+ + I +A D
Sbjct: 165 FTFGSIIKACSSLGDI--GLGRQLHAHVLKSEFGAHIIAQN--ALISMYTKSNLIIDALD 220
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHG 571
+M + + W IAG + G
Sbjct: 221 VFSRMATR-DLISWGSMIAGFSQLG 244
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 323/580 (55%), Gaps = 11/580 (1%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L+ C ++ E++H VK+G FV + LV++Y K G E+ VF+N+ NV
Sbjct: 158 LKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNV 217
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSWT++I G V + F +M + + T AL A + + GK IHA
Sbjct: 218 VSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQ 277
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
+K + V N+L ++YS C + ++ F ++ +V+SWT +I + G+ +
Sbjct: 278 TIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERA 337
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
L F +M + PNE+T S+ S C + + G Q+H ++LG L V NSI+ L
Sbjct: 338 LDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITL 397
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCGL+ EA +FDGM+ ++++W+ +I+ + Q +H EA + S ++
Sbjct: 398 YSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQ---------GSH--AKEAFNYLSWMS 446
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G KP+ + +S+L++C + LE G+Q+HA L G + +V +AL++MY + G ++
Sbjct: 447 REGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQ 506
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
AS++F + ++SWT+MI G+A H S +A+ LFE++ G+ P+ VTF+G L AC+
Sbjct: 507 EASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACN 566
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+AG+V Y+++M EY+I P +HY C+ID+ R G + EA ++ M F ++V+W
Sbjct: 567 HAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVW 626
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
S + CR HG+++ +AAEQ+L+L P ++ L +I+ ++GR E+ A V+ L + +
Sbjct: 627 STLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSK 686
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + WSWI D++ +F HP S +I +L+ L
Sbjct: 687 GVIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELL 726
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 140/539 (25%), Positives = 246/539 (45%), Gaps = 60/539 (11%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLG 179
K G + EA+ +F+ + + +SWT+LI+GYV + A+ +F +M +++G +
Sbjct: 96 KLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVS 155
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
AL AC+ ++ G+ +H + VK + V ++L +Y G F + +
Sbjct: 156 VALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTR 215
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
NV+SWT VI G ++ GL +FS+M + + T L G +H
Sbjct: 216 NVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIH 275
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
+ IK G+ V N++ +Y KC D +LF MS ++V+W +I + QM D
Sbjct: 276 AQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEE 335
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
+ AL F ++ S + P+ YTF+S+++ C+ L + GEQIH L+ G
Sbjct: 336 R-----------ALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGL 384
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
+ + V +++ +Y KCG ++ AS VF M+ + +ISW+++I+ + S + +A
Sbjct: 385 VDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSW 444
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH----YMCLIDMF 535
M G +PN+ L+ C + ++ Y + +DH + LI M+
Sbjct: 445 MSREGPKPNEFALASVLSVCGSMALLEPG-----KQVHAYALCIGLDHETMVHSALISMY 499
Query: 536 VRLGCIEEA---FDFIKKMD-----------------------FE--------PNEVIWS 561
R G ++EA FD IK D FE P+ V +
Sbjct: 500 SRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFI 559
Query: 562 VFIAGCRRHGNMELGFYAAEQL---LKLKPKDCESYAMLLDIFVSAGRWEDVA-VVKNL 616
+ C G ++LGFY + + ++ P E Y ++D+ AGR + +V+N+
Sbjct: 560 GILTACNHAGLVDLGFYYYKLMTNEYQIAPSK-EHYGCIIDLLCRAGRLSEAEHMVRNM 617
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 184/404 (45%), Gaps = 27/404 (6%)
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
N P N T C + I GK Y + + + L L G + A
Sbjct: 48 NPPLNYVYPGTATECRDM--IWQGKPEQRAPTAYYVPNMPELNSQLKQLMK-LGKICEAR 104
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTM 289
FN++ ++ +SWT +I + + L FS M + G+Q ++F ++ C
Sbjct: 105 DMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALG 164
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+++ G +H +K G +++ V ++++ +Y+K G ++ +F+ M+ N+V+W A+I
Sbjct: 165 MNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVI 224
Query: 350 AGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
G H G + + LS FS++ S + D +TF+ L + L G+
Sbjct: 225 VG------------LVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGK 272
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IHA T+K GF V L MY KC + + R+F +MST ++SWT++I +
Sbjct: 273 AIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMG 332
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+AL F+ M + V PN+ TF ++AC+N + + E + ++D
Sbjct: 333 DEERALDAFKRMRKSDVSPNEYTFASVISACANLAIT----KWGEQIHGHALRLGLVDAL 388
Query: 529 MC---LIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAG 566
+I ++ + G ++EA FD + + D I SV+ G
Sbjct: 389 SVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQG 432
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 2/287 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S++ C N E IH H ++ G V ++ +Y KCG ++EA VFD +
Sbjct: 355 TFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGM 414
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
R +++SW+++IS Y Q S + A + M G P L + L+ C S+ + GK
Sbjct: 415 TRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGK 474
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HAY + + +T V ++L S+YS G+L A K F+ I+ +++SWT +I E+G
Sbjct: 475 QVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHG 534
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-KLGYASNLRVR 314
+ + + F + S G+ P+ T I + C + +G + L + A +
Sbjct: 535 YSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHY 594
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIAGHAQMMDLAK 360
I+ L + G + EA+ + M + V W+ ++ DL +
Sbjct: 595 GCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDR 641
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 12/238 (5%)
Query: 60 QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA + L+ EGPK + S+L C + L + +HA+ + G + V + L
Sbjct: 436 KEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSAL 495
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y + GN++EA K+FD++ ++VSWT++I+GY ++ + AI +F ++ G P
Sbjct: 496 ISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDY 555
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF- 233
VT LTAC+ + LG + + +YQ + L G L+ A
Sbjct: 556 VTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVR 615
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN----EFTLTSISSVCG 287
N + + W+T++ AC ++G+ + + +ML + PN TL +I S G
Sbjct: 616 NMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLR--LHPNSAGAHITLANIYSASG 671
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/598 (33%), Positives = 323/598 (54%), Gaps = 15/598 (2%)
Query: 95 IIHAHIVKTGS-HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
++HA K S + FV T L+N+Y K G + +AQ VFD +P N VSW ++++GY
Sbjct: 138 VVHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAAR 197
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
+ A +F ML N + TA L+A S + +G Q+H VVK SV
Sbjct: 198 KCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSV 257
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
NSL ++Y+ G +++A F +E+N ++W+ +I +NG A +R FS+M + G
Sbjct: 258 ENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGF 317
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P EFTL + + C + +L G Q H L +KLG+ + V+++++ +Y KCG + +A++
Sbjct: 318 PPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKE 377
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTF 391
F+ S +++V W AM+ GH Q NG E AL ++++++ G+ P+ T
Sbjct: 378 CFNQFSELDIVLWTAMVTGHVQ------------NGEFEQALMLYARMDKEGVFPNTLTI 425
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+S+L C+ L ALE G+Q+H LK GF VG+AL MY KCG +E VF M
Sbjct: 426 TSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPH 485
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R +I+W S+I+GF+ + + A+ LFE+M L G P+ VTF+ L ACS+ G+V Y
Sbjct: 486 RDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTY 545
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F M K+Y + P +DHY C++D+ R G + EA DFI+ + + +W + + CR
Sbjct: 546 FRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLR 605
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
+ ++G YA E+L+ L D +Y +L +I+ + +W DV V+ L + +S+ SW+
Sbjct: 606 DFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWV 665
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYHSE 689
+ +V+ F + HP + I L L + K GY + ++ H E
Sbjct: 666 ELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMKDEGYNPASKYSRDVPDALGESHQE 723
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 196/394 (49%), Gaps = 29/394 (7%)
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS--LNSAIKAFNRIR--EKNVMSWTTV 247
R G+ +HA+ +K + V NSL + YS+ L +A F I ++V SW ++
Sbjct: 29 RDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSL 88
Query: 248 IGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+ + + L F MLS I P+ + + + S GA VH+L KL
Sbjct: 89 LNPLSHH-RPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLP 147
Query: 307 YA-SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
A SN+ V +++ +Y K GL+ +AQ +FD M H N V+W AM+AG+A A
Sbjct: 148 SASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYA-----------A 196
Query: 366 HNGGTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
EA +F + L + + + +++L+ S + L G Q+H L +K G + V
Sbjct: 197 RKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVS 256
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +LV MY K G ++ A VF R I+W++MITG++ + + A+++F M AG
Sbjct: 257 VENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAG 316
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQK-EYKIKPVMDHYMCLIDMFVRLGCI-- 541
P + T VG L ACS+ G + E +M K ++++ + L+DM+ + GCI
Sbjct: 317 FPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKS--ALVDMYAKCGCIGD 374
Query: 542 -EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+E F+ ++D V+W+ + G ++G E
Sbjct: 375 AKECFNQFSELDI----VLWTAMVTGHVQNGEFE 404
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/664 (29%), Positives = 356/664 (53%), Gaps = 16/664 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH ++ H D F++ L+ + + +F + N+ + SLI+G+V N
Sbjct: 32 IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHL 91
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ +FL + + G Y T L AC+ S +LG +H+ VVK D + S
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+YS G LN A K F+ I +++V++WT + +G + + F KM+ G++P+
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ + + S C + L G + ++ N VR +++ LY KCG +++A+ +FD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M ++VTW+ MI G+A +++ E + +F ++ +KPD ++ L
Sbjct: 272 SMVEKDIVTWSTMIQGYA-----------SNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ C+ L AL+ GE +L + FL+++ + AL++MY KCG + R VF EM + ++
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
+ I+G A + + +F G+ P+ TF+G L C +AG++ + L +F +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
Y +K ++HY C++D++ R G +++A+ I M PN ++W ++GCR + +L
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
++L+ L+P + +Y L +I+ GRW++ A V+++ ++ + + +SWI ++
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASV--YHSEK 690
KV+ F +D HP S +I+ L++L + + G+ F++ +EE V YHSEK
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEK 620
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LA+A GL++T I VVK+ +C DCH +K+I+ +T REI+VRD+ R H F NG C+
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 751 CRDF 754
C D+
Sbjct: 681 CNDY 684
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 208/404 (51%), Gaps = 15/404 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
LS+ G + ++ +L+ C S +H+ +VK G + D MT L+++Y
Sbjct: 100 LSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS 159
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + +A K+FD +P +VV+WT+L SGY + + AI +F M+E G P + + L
Sbjct: 160 GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVL 219
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+AC + + G+ I Y+ + + + ++ V +L +LY+ CG + A F+ + EK+++
Sbjct: 220 SACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV 279
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+W+T+I N +G+ F +ML E ++P++F++ S C ++ +L +G SL
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI 339
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+ + +NL + N+++ +Y KCG + ++F M ++V NA I+G A+
Sbjct: 340 DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAK-------- 391
Query: 363 LSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFL 420
NG + + ++F + G+ PD TF +L C ++ G + +A++
Sbjct: 392 ----NGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG 463
V +V+++ + G ++ A R+ +M R I W ++++G
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/693 (29%), Positives = 362/693 (52%), Gaps = 29/693 (4%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++ +L+ C +L H+ ++ G + D + L+ Y + G +++A++VFD
Sbjct: 110 TFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDG 169
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRL 193
+P +VV+W S++ GYV N LA+ F +M EA + V + AL AC ++
Sbjct: 170 MPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQ 229
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+++HAYV+++ E D VG S+ +Y CG + SA F + + V++W +IG
Sbjct: 230 GREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYAL 289
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
N + F +M +EG Q T ++ + C S G VH + + ++ +
Sbjct: 290 NERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVL 349
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
+++ +Y K G V ++K+F M+ LV+WN MIA + + K+ EA+
Sbjct: 350 ETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAY-----MYKEMY------MEAI 398
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
++F L + + PD +T S+++ L L Q Q+H+ ++ G+ + ++ A+++MY
Sbjct: 399 TLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMY 458
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+CG + + +F +M+ + +ISW +MI G+A H AL++F +M G+RPN+ TFV
Sbjct: 459 ARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFV 518
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L ACS +G+ E F MQ++Y + P ++HY C+ D+ R G ++E FI+ M
Sbjct: 519 SVLTACSVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPI 578
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES-----YAMLLDIFVSAGRWE 608
+P +W + R ++++ YAAE++ +L+ E Y ++ ++ AGRW+
Sbjct: 579 DPTFRVWGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWK 638
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV +K+L E+ L TD S + + SF D HPQS I +V + L K
Sbjct: 639 DVERIKSLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQSKMIQEVSNFLSGKIG--- 695
Query: 669 YKQQESFELTDEESASVY-------HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
+ ++ +D S HS +LA+ FGL++T +PILV K+ +C DCH+
Sbjct: 696 -EMRDPMNQSDPTSLDSRRTTEPNKHSVRLAVVFGLISTEARTPILVKKNVRICNDCHHA 754
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K+I+ + R I+V D+ H+F +G C C D+
Sbjct: 755 LKLISKYSGRRIVVGDTNIYHQFSDGSCCCGDY 787
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 207/412 (50%), Gaps = 18/412 (4%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
EAL V +G + ++ L C +L +HA++++ G D V T ++++
Sbjct: 201 MHEALEVQHDGVGI-----IAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDM 255
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG++ A+ VF +P VV+W +I GY N +PE A F+ M G+ VT
Sbjct: 256 YCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTA 315
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
L AC+ ES G+ +H Y+ + Q + +L +YS G + S+ K F ++
Sbjct: 316 INLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVFGQMTT 375
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K ++SW +I A ++ + F +L++ + P+ FT++++ + LR Q+
Sbjct: 376 KTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQM 435
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
HS I+LGY N + N+IM++Y +CG V ++++FD M+ ++++WN MI G+A
Sbjct: 436 HSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYA----- 490
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKT 417
H G AL +FS++ +G++P+ TF S+LT CS ++G Q +++
Sbjct: 491 ------IHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDY 544
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS 468
G + + + ++ + G ++ + M T W S++T N +
Sbjct: 545 GMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTASRNRN 596
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 15/232 (6%)
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ FT + C + +L G HS I+LG A+++ NS++ Y + GLVD+A+
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSS-GMKPDLY 389
++FDGM ++VTWN+M+ G+ NG GT AL F +++ + ++ D
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVS------------NGLGTLALVCFREMHEALEVQHDGV 212
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ L C AL QG ++HA ++ G DV VGT++++MY KCG I A VF M
Sbjct: 213 GIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATM 272
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+RT+++W MI G+A + +A F M G + VT + LAAC+
Sbjct: 273 PSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQ 324
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 22/193 (11%)
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF-LSDVVVGTALVNMYKKCGRIERAS 443
+PD +TF +L C+RL AL++G H+ ++ G +DV G +L+ Y + G ++ A
Sbjct: 105 RPDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAE 164
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQVTFVGALAACSNA 502
RVF M R +++W SM+ G+ ++ L AL F +M A V+ + V + ALAAC
Sbjct: 165 RVFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACC-- 222
Query: 503 GMVYEALGYFEMMQKE---YKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEP 555
+ AL M +E Y I+ M+H + ++DM+ + G I A M P
Sbjct: 223 --LESAL----MQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATM---P 273
Query: 556 NE--VIWSVFIAG 566
+ V W+ I G
Sbjct: 274 SRTVVTWNCMIGG 286
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/657 (33%), Positives = 353/657 (53%), Gaps = 57/657 (8%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A VF+ +P N + W + G+ +S P A+ +++ M+ G P T L +C+
Sbjct: 28 AISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAK 87
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR------------ 235
++ + G+QIH +V+K + D V SL S+Y+ G L A K F+R
Sbjct: 88 SKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTAL 147
Query: 236 -------------------IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
I K+V+SW +I E G + L F +M+ ++P+E
Sbjct: 148 ITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDE 207
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ ++ S C S+ +G QVHS G+ SNL++ N+++ LY KCG V+ A +L +G
Sbjct: 208 STMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEG 267
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILT 396
+S+ ++++WN +I G+ M N EAL +F ++ SG P+ T SIL
Sbjct: 268 LSNKDVISWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGETPNDVTMLSILP 316
Query: 397 ICSRLVALEQGEQIHALTLKTGFLSDVVVG------TALVNMYKKCGRIERASRVFVEMS 450
C+ L A++ G IH K L VVV T+L++MY KCG I+ A +V +
Sbjct: 317 ACAHLGAIDIGRWIHVYIDKK--LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSA 374
Query: 451 -TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R+L +W +MI GFA H ++ A +F M G+ P+ +TFVG L+ACS++GM+
Sbjct: 375 FNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
F M+++Y I P ++HY C+ID+ G +EA + I M EP+ VIW + C+
Sbjct: 435 NIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKI 494
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL-SETDDW 628
HGN+ELG A++L+K++P++ SY +L +I+ +AG+W +V ++ L ++ + +
Sbjct: 495 HGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGC 554
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
S I I V+ F D LHPQ+ EI+ +L+E+ + G+ S L + +E A
Sbjct: 555 SSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGA 614
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKR 740
+HSEKLAIAFGL++T + + +VK+ +CR+CH K+I+ + REII RD R
Sbjct: 615 LRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 195/399 (48%), Gaps = 53/399 (13%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S+PV +L + L P T + LL+ C K+ + IH H++K G D
Sbjct: 53 SSDPVSALKLYVVMISLGLLPNFFTFPF--LLKSCAKSKTFKEGQQIHGHVLKLGFDLDL 110
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDN-------------------------------LPRI 138
+V T L+++Y + G +E+AQKVFD +P
Sbjct: 111 YVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIK 170
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSW ++ISGY + + A+ +F +M++ P T+ T ++AC+ SI LG+Q+H
Sbjct: 171 DVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVH 230
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L LYS CG + +A + + K+V+SW T+IG
Sbjct: 231 SWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYK 290
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL------GIKLGYASNLR 312
+ L F +ML G PN+ T+ SI C + ++ +G +H G+ + AS+LR
Sbjct: 291 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLR 350
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
S++ +Y KCG +D A ++ D + + +L TWNAMI G A H
Sbjct: 351 T--SLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAM-----------HGRANA 397
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
A IFS++ +G++PD TF +L+ CS L+ G I
Sbjct: 398 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 224/463 (48%), Gaps = 66/463 (14%)
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
C L L AI F I E N + W + + + V L+ + M+S G+ PN
Sbjct: 15 FCILSPHFDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPN 74
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
FT + C + + G Q+H +KLG+ +L V S++ +Y + G +++AQK+FD
Sbjct: 75 FFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFD 134
Query: 336 GMSHVNLVTWNAMIAGHA---------QMMD--LAKDDLS--------AHNGG-TEALSI 375
SH ++V++ A+I G+A +M D KD +S A G +AL +
Sbjct: 135 RSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALEL 194
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ + +KPD T +++++ C++ ++E G Q+H+ GF S++ + AL+++Y K
Sbjct: 195 FKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSK 254
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG +E A + +S + +ISW ++I G+ + +L +AL LF++ML +G PN VT +
Sbjct: 255 CGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 314
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVM-----DHYMCLIDMFVRLGCIE-------- 542
L AC++ G + +G + + + K+K V+ LIDM+ + G I+
Sbjct: 315 LPACAHLGAI--DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDS 372
Query: 543 ------------------------EAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMEL 575
AFD +M EP+++ + ++ C G ++L
Sbjct: 373 SAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDL 432
Query: 576 G---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
G F + Q + PK E Y ++D+ +G +++ + N
Sbjct: 433 GRNIFRSMRQDYNITPK-LEHYGCMIDLLGHSGLFKEAEEMIN 474
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 327/583 (56%), Gaps = 18/583 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQKVFDNL 135
Y SLLQ C + ++ IHAH++K+G D FV L+ +Y K G + E +KVFD L
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+V+SWTS+ISGYV+ +P ++ +F ML G P TL + ACS L ++LG+
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
H V+ + + + ++L ++ +L+ A + F+ + E + + WT++I A N
Sbjct: 182 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 241
Query: 256 EAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ LRFF M + G+ P+ FT ++ + CG + L+ G +VH+ I G+ N+ V
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 301
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+S++ +Y KCG V E+Q++FD M N V+W+A++ G+ Q D +
Sbjct: 302 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDF-----------KSVIQ 350
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF K+ K DLY F +IL C+ L A+ QG+++H ++ G DV+V +ALV++Y
Sbjct: 351 IFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYA 406
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG IE A +F +M R LI+W SMI GFA + +AL++F M+ G++P+ ++F+G
Sbjct: 407 KCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIG 466
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+ G+V E YF M K+Y IK ++HY C++D+ R G +EEA I+ DF
Sbjct: 467 ILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFR 526
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ +W+ + C N E+ A+++++L+P SY +L +++ + GRW D ++
Sbjct: 527 DDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIR 586
Query: 615 NLTREEKLSETDDWSWIRIKDKV-YSFKPNDGLHPQSAEIFKV 656
L ++ +++ SWI K+ + SF + L P + V
Sbjct: 587 RLMKDRGVNKMPGKSWIETKNNLGSSFDFENSLVPGESNFLDV 629
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 214/417 (51%), Gaps = 21/417 (5%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS-LNSAIKAFN 234
V + L C+ + + G QIHA+V+K E D VGNSL +LY G+ K F+
Sbjct: 60 VLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFD 119
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ K+V+SWT++I G+ + L F KML+ G++PN FTL+++ C + L++
Sbjct: 120 GLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKL 179
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G H + + G+ SN + ++++ ++ + +D+A++LFD + + + W ++I+
Sbjct: 180 GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISA--- 236
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
L ++D EAL F + GM PD +TF ++LT C L L+QG+++HA
Sbjct: 237 ---LTRNDFF-----DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAK 288
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ TGF +VVV ++LV+MY KCG + + R+F M + +SW++++ G+ +
Sbjct: 289 VITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSV 348
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
+Q+F M + + F L C+ V + ++ + V+ L+D
Sbjct: 349 IQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SALVD 403
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
++ + GCIE A +M N + W+ I G ++G E Q++K +KP
Sbjct: 404 LYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKP 459
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/403 (28%), Positives = 210/403 (52%), Gaps = 22/403 (5%)
Query: 51 SEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+P+ SL + +L G + + ++++ C L I H ++ G ++
Sbjct: 140 GKPMNSL--ELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYV 197
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEA 169
+ + L++++G+ +++A+++FD L + + WTS+IS +N + A+ F M +
Sbjct: 198 IASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDH 257
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
G P T GT LTAC +L ++ GK++HA V+ + V +SL +Y CGS+ +
Sbjct: 258 GMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGES 317
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F+R+ KN +SW+ ++G +NG+ ++ F KM + + + +I C +
Sbjct: 318 QRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGL 373
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
++R G +VH I+ G ++ V ++++ LY KCG ++ AQ +FD M NL+TWN+MI
Sbjct: 374 AAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMI 433
Query: 350 AGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG- 407
G AQ NG G EAL IF+++ G+KPD +F IL CS +++G
Sbjct: 434 GGFAQ------------NGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGR 481
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
E ++T G + + +V++ + G +E A + +E S
Sbjct: 482 EYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEA-EILIETS 523
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
N ++ ++ C ++GE L+ + I S+ C +L+ G Q+H
Sbjct: 24 NTNPFSKILQLC-KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIH 82
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
+ IK G + V NS++ LY K G E +K+FDG+ ++++W +MI+G+ ++
Sbjct: 83 AHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRV--- 139
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+L +F K+ + G++P+ +T S+++ CS L L+ G H + L G
Sbjct: 140 --------GKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRG 191
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F S+ V+ +AL++M+ + ++ A ++F E+ I WTS+I+ + +AL+ F
Sbjct: 192 FDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFY 251
Query: 479 DMLLA-GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-------C 530
M G+ P+ TF L AC N G + + KE K + +
Sbjct: 252 SMQRDHGMCPDGFTFGTVLTACGNLGRLKQG--------KEVHAKVITTGFCGNVVVESS 303
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL-KLKPK 589
L+DM+ + G + E+ +M + N V WS + G ++G+ F + Q+ K++
Sbjct: 304 LVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALLGGYCQNGD----FKSVIQIFRKMEKV 358
Query: 590 DCESYAMLLDI----------------FVSAGRWEDVAV 612
D + +L ++ G W DV V
Sbjct: 359 DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIV 397
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F+ + + + KV + ++L+ C ++ + +H ++ G +D V + LV++
Sbjct: 345 FKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDL 404
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG +E AQ +FD +P N+++W S+I G+ QN + E A+ +F M++ G P ++
Sbjct: 405 YAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISF 464
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG----NSLCSLYSTCGSLNSA--IKA 232
L ACS + G++ Y + + VG + + L G L A +
Sbjct: 465 IGILFACSHRGLVDEGRE---YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIE 521
Query: 233 FNRIREKNVMSWTTVIGAC 251
+ R+ + + W ++GAC
Sbjct: 522 TSDFRDDSSL-WAALLGAC 539
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 349/649 (53%), Gaps = 39/649 (6%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y K G + EA+KVFD +P NVVSWTS++ GYVQ + A +F M E
Sbjct: 84 LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSW 143
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
V LG + E+ RL I VK +G LCS G L+ A + F+
Sbjct: 144 TVMLGGLIEDGRVDEARRLFDMIP---VKDVVASTNMIGG-LCSE----GRLSEAREIFD 195
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++NV++WT++I N + + F M P++ +T + + G S R+
Sbjct: 196 EMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM------PDKNEVTWTAMLKGYTRSGRI 249
Query: 295 GAQVH---SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
++ +K A N IM L G V +A+ +FD M + TW+A+I
Sbjct: 250 NEAAELFKAMPVKPVAACN----GMIMGFGLN-GEVGKARWVFDQMKEKDDGTWSALIKI 304
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ + EAL++FS + G++P+ + SIL++C L +L+ G Q+H
Sbjct: 305 YER-----------KGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVH 353
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
+ +++ F D+ V + L+ MY KCG + RVF S++ ++ W S+I G+A H
Sbjct: 354 SQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGE 413
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL++F +M +G P+++TF+G L+AC G V E L FE M+ +Y++ +HY C+
Sbjct: 414 KALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACM 473
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+ R G + EA + I+ M E + ++W ++ CR H N++L AA++LL+L+P
Sbjct: 474 VDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSA 533
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQS 650
Y +L +++ S RW+DVA ++ R +S++ SWI + +KV+ F HP+
Sbjct: 534 GPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEH 593
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSP 705
I K L++L + GY SF + D +E V +HSEK+A+A+GLL P+ P
Sbjct: 594 EMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKP 653
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V+K+ +C DCH+ IK+I +T REII+RD+ R H F +G C+CRDF
Sbjct: 654 IRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDF 702
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 206/465 (44%), Gaps = 75/465 (16%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
EA + + P+ T S+ L+ V +S A + + ++ T +V Y
Sbjct: 65 EAQKLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKM----PERNVVSWTSMVRGYV 120
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
+ G ++EA+ +F +P NVVSWT ++ G +++ + + A +F DM+ + + +
Sbjct: 121 QEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF-DMIPVKDVVASTNMIG 179
Query: 181 ALTACSSLESIR------LGKQIHAY---VVKYQTEDDTSVGNSLCSL------------ 219
L + L R + + A+ + Y + V L +
Sbjct: 180 GLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAM 239
Query: 220 ---YSTCGSLNSAIK-------------------------------AFNRIREKNVMSWT 245
Y+ G +N A + F++++EK+ +W+
Sbjct: 240 LKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWS 299
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I G ++ L FS M EG++PN ++ SI SVCG++ SL G QVHS ++
Sbjct: 300 ALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRS 359
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ ++ V + ++ +Y+KCG + +++FD S ++V WN++IAG+AQ
Sbjct: 360 HFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQ----------- 408
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
H G +AL +F ++ SSG PD TF +L+ C +++G +I ++K+ + D
Sbjct: 409 HGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFE-SMKSKYQVDQKT 467
Query: 426 G--TALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+V++ + G++ A + M I W ++++ H
Sbjct: 468 EHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTH 512
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 7/201 (3%)
Query: 58 GFQ-EALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
GF+ EAL++ + EG + S +S+L C + SL + +H+ +V++ D +V
Sbjct: 309 GFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVS 368
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+ L+ +Y KCG++ ++VFD ++V W S+I+GY Q+ E A+ VF +M +G
Sbjct: 369 SVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAA 428
Query: 173 PTNVTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
P +T L+AC ++ G +I + KYQ + T + L G LN A+
Sbjct: 429 PDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMN 488
Query: 232 AF-NRIREKNVMSWTTVIGAC 251
N E + + W ++ AC
Sbjct: 489 LIENMPVEADAIVWGALLSAC 509
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
+ ++ F S + ++ + + G+I+RA +F ++ ++T+ SW +++ G+ ++ +
Sbjct: 6 IPYRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAE 65
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLI 532
A +LF+ M N +++ G ++ GM+ EA F+ M + + + ++
Sbjct: 66 AQKLFDKM----PERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS-----WTSMV 116
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDC 591
+V+ G I+EA +M E N V W+V + G G ++ A +L + P KD
Sbjct: 117 RGYVQEGLIDEAELLFWRMP-EKNVVSWTVMLGGLIEDGRVD----EARRLFDMIPVKDV 171
Query: 592 ESYAMLLDIFVSAGR 606
+ ++ S GR
Sbjct: 172 VASTNMIGGLCSEGR 186
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/583 (33%), Positives = 327/583 (56%), Gaps = 18/583 (3%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQKVFDNL 135
Y SLLQ C + ++ IHAH++K+G D FV L+ +Y K G + E +KVFD L
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+V+SWTS+ISGYV+ +P ++ +F ML G P TL + ACS L ++LG+
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 240
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
H V+ + + + ++L ++ +L+ A + F+ + E + + WT++I A N
Sbjct: 241 IFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRND 300
Query: 256 EAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ LRFF M + G+ P+ FT ++ + CG + L+ G +VH+ I G+ N+ V
Sbjct: 301 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 360
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+S++ +Y KCG V E+Q++FD M N V+W+A++ G+ Q D +
Sbjct: 361 SSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDF-----------KSVIQ 409
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF K+ K DLY F +IL C+ L A+ QG+++H ++ G DV+V +ALV++Y
Sbjct: 410 IFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYA 465
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG IE A +F +M R LI+W SMI GFA + +AL++F M+ G++P+ ++F+G
Sbjct: 466 KCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIG 525
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+ G+V E YF M K+Y IK ++HY C++D+ R G +EEA I+ DF
Sbjct: 526 ILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFR 585
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ +W+ + C N E+ A+++++L+P SY +L +++ + GRW D ++
Sbjct: 586 DDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIR 645
Query: 615 NLTREEKLSETDDWSWIRIKDKV-YSFKPNDGLHPQSAEIFKV 656
L ++ +++ SWI K+ + SF + L P + V
Sbjct: 646 RLMKDRGVNKMPGKSWIETKNNLGSSFDFENSLVPGESNFLDV 688
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 214/417 (51%), Gaps = 21/417 (5%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS-LNSAIKAFN 234
V + L C+ + + G QIHA+V+K E D VGNSL +LY G+ K F+
Sbjct: 119 VLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFD 178
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ K+V+SWT++I G+ + L F KML+ G++PN FTL+++ C + L++
Sbjct: 179 GLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKL 238
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G H + + G+ SN + ++++ ++ + +D+A++LFD + + + W ++I+
Sbjct: 239 GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISA--- 295
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
L ++D EAL F + GM PD +TF ++LT C L L+QG+++HA
Sbjct: 296 ---LTRNDFF-----DEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAK 347
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ TGF +VVV ++LV+MY KCG + + R+F M + +SW++++ G+ +
Sbjct: 348 VITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSV 407
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
+Q+F M + + F L C+ V + ++ + V+ L+D
Sbjct: 408 IQIFRKM----EKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SALVD 462
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
++ + GCIE A +M N + W+ I G ++G E Q++K +KP
Sbjct: 463 LYAKCGCIEYAQTIFDQMPVR-NLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKP 518
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 204/389 (52%), Gaps = 20/389 (5%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + ++++ C L I H ++ G ++ + + L++++G+
Sbjct: 211 MLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCA 270
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALT 183
+++A+++FD L + + WTS+IS +N + A+ F M + G P T GT LT
Sbjct: 271 LDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLT 330
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC +L ++ GK++HA V+ + V +SL +Y CGS+ + + F+R+ KN +S
Sbjct: 331 ACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVS 390
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W+ ++G +NG+ ++ F KM + + + +I C + ++R G +VH I
Sbjct: 391 WSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYI 446
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ G ++ V ++++ LY KCG ++ AQ +FD M NL+TWN+MI G AQ
Sbjct: 447 RKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQ--------- 497
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLS 421
NG G EAL IF+++ G+KPD +F IL CS +++G E ++T G
Sbjct: 498 ---NGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKV 554
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ + +V++ + G +E A + +E S
Sbjct: 555 GIEHYSCMVDLLGRAGLLEEAE-ILIETS 582
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
N ++ ++ C ++GE L+ + I S+ C +L+ G Q+H
Sbjct: 83 NTNPFSKILQLC-KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIH 141
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGL-VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
+ IK G + V NS++ LY K G E +K+FDG+ ++++W +MI+G+ ++
Sbjct: 142 AHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRV--- 198
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
+L +F K+ + G++P+ +T S+++ CS L L+ G H + L G
Sbjct: 199 --------GKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRG 250
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F S+ V+ +AL++M+ + ++ A ++F E+ I WTS+I+ + +AL+ F
Sbjct: 251 FDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFY 310
Query: 479 DMLLA-GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM-------C 530
M G+ P+ TF L AC N G + + KE K + +
Sbjct: 311 SMQRDHGMCPDGFTFGTVLTACGNLGRLKQG--------KEVHAKVITTGFCGNVVVESS 362
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL-KLKPK 589
L+DM+ + G + E+ +M + N V WS + G ++G+ F + Q+ K++
Sbjct: 363 LVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALLGGYCQNGD----FKSVIQIFRKMEKV 417
Query: 590 DCESYAMLLDI----------------FVSAGRWEDVAV 612
D + +L ++ G W DV V
Sbjct: 418 DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIV 456
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
F+ + + + KV + ++L+ C ++ + +H ++ G +D V + LV++
Sbjct: 404 FKSVIQIFRKMEKVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVDL 463
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y KCG +E AQ +FD +P N+++W S+I G+ QN + E A+ +F M++ G P ++
Sbjct: 464 YAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISF 523
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG----NSLCSLYSTCGSLNSA--IKA 232
L ACS + G++ Y + + VG + + L G L A +
Sbjct: 524 IGILFACSHRGLVDEGRE---YFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIE 580
Query: 233 FNRIREKNVMSWTTVIGAC 251
+ R+ + + W ++GAC
Sbjct: 581 TSDFRDDSSL-WAALLGAC 598
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/589 (32%), Positives = 329/589 (55%), Gaps = 21/589 (3%)
Query: 164 LDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
LD L++G PT +TAC+ +++ ++IHA++ + D + NSL LY
Sbjct: 39 LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGS+ A K F+++R K+++SWT++I +N + + ML +PN FT S+
Sbjct: 99 CGSVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASL 158
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
G +G Q+H+L +K + ++ V ++++ +Y +CG +D A +FD + N
Sbjct: 159 LKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNG 218
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V+WNA+I+G A+ D G AL +F+++ +G + +T+SSI + + +
Sbjct: 219 VSWNALISGFARKGD-----------GETALMVFAEMQRNGFEATHFTYSSIFSALAGIG 267
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
ALEQG+ +HA +K+ VG +++MY K G + A +VF + + L++W SM+T
Sbjct: 268 ALEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLT 327
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
FA + L +A+ FE+M +G+ NQ++F+ L ACS+ G+V E YF+M+ KEY ++
Sbjct: 328 AFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMI-KEYNLE 386
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P ++HY+ ++D+ R G + A FI KM EP +W +A CR H N ++G +AA+
Sbjct: 387 PEIEHYVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADH 446
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+ +L P D +L +I+ S G W+ A V+ + + + + SW+ I++ V+ F
Sbjct: 447 VFQLDPDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVA 506
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGL 697
ND HP++ EI+K+ DE+ K + GY + L DE+ YHSEK+A+AF L
Sbjct: 507 NDDTHPRAEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFAL 566
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
+ P + I ++K+ +C DCH+ K I+ + REI++ LHK V
Sbjct: 567 IQMPAGATIRIMKNIRICGDCHSAFKYISKVFEREIVI---IHLHKDVQ 612
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 199/403 (49%), Gaps = 16/403 (3%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L P+V Y + + C K+L +A IHAH+ + D F+ L+++Y KCG++
Sbjct: 47 LAPTPRV----YHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSV 102
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
EA KVFD + ++VSWTSLI+GY QN P AI + ML+ P T + L A
Sbjct: 103 VEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV 162
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
+ +G QIHA VK +D VG++L +Y+ CG ++ A F+++ KN +SW
Sbjct: 163 GAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I G+ L F++M G + FT +SI S + +L G VH+ IK
Sbjct: 223 ALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKS 282
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
V N+++ +Y K G + +A+K+F+ + + +LVTWN+M+ AQ
Sbjct: 283 RQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQ----------- 331
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
+ G EA+S F ++ SG+ + +F ILT CS +++G+ + + ++
Sbjct: 332 YGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEH 391
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+V++ + G + A +M T W +++ H
Sbjct: 392 YVTVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 319/559 (57%), Gaps = 15/559 (2%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA +VK S D +V T LV +Y K G +E+ KVF +P N +W++++SGY +
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 157 ELAIHVF---LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
E AI VF L E G+ ++ L++ ++ + LG+QIH +K ++
Sbjct: 201 EEAIKVFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS 259
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L ++YS C SLN A K F+ ++N ++W+ ++ +NGE+++ ++ FS+M S GI+
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+E+T+ + + C + L G Q+HS +KLG+ +L +++ +Y K G + +A+K
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD + ++ W ++I+G+ Q D EAL ++ ++ ++G+ P+ T +S
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSD-----------NEEALILYRRMKTAGIIPNDPTMAS 428
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L CS L LE G+Q+H T+K GF +V +G+AL MY KCG +E + VF +
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SW +MI+G +++ +AL+LFE+ML G+ P+ VTFV ++ACS+ G V YF
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 548
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
MM + + P +DHY C++D+ R G ++EA +FI+ + + +W + ++ C+ HG
Sbjct: 549 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKC 608
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
ELG YA E+L+ L ++ +Y L I+ + GR DV V R +S+ SWI +
Sbjct: 609 ELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
Query: 634 KDKVYSFKPNDGLHPQSAE 652
K++ + F D +HP E
Sbjct: 669 KNQYHVFVVGDTMHPMIEE 687
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 280/579 (48%), Gaps = 55/579 (9%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
TS+ + L +++L +H I++TG+ LVN Y KCG + +A +F
Sbjct: 13 HTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIF 72
Query: 133 DNLPRINVVSWTSLISGYVQN---SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+ + +VVSW SLI+GY QN S + +F +M P TL A SSL+
Sbjct: 73 NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQ 132
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
S +G+Q HA VVK + D V SL +Y G + +K F + E+N +W+T++
Sbjct: 133 SSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
G + ++ F+ L E + +++ T++ S + + +G Q+H + IK G
Sbjct: 193 GYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + N+++ +Y KC ++EA K+FD N +TW+AM+ G++Q N
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ------------N 300
Query: 368 GGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G + EA+ +FS++ S+G+KP YT +L CS + LE+G+Q+H+ LK GF +
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT 360
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TALV+MY K G + A + F + R + WTS+I+G+ +S + +AL L+ M AG+
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 487 PNQVTFVGALAACSNAGMV----------------------------YEALGYFEMMQKE 518
PN T L ACS+ + Y G E
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 519 YKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNM 573
++ P D + +I G +EA + ++M EP++V + I+ C G +
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 574 ELGFYAAEQL---LKLKPKDCESYAMLLDIFVSAGRWED 609
E G++ + + L PK + YA ++D+ AG+ ++
Sbjct: 541 ERGWFYFNMMSDQIGLDPK-VDHYACMVDLLSRAGQLKE 578
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 212/426 (49%), Gaps = 22/426 (5%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P TL LT S ++ G+ +H +++ N L + Y+ CG L A
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 233 FNRIREKNVMSWTTVIGACGENG---EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
FN I K+V+SW ++I +NG + ++ F +M ++ I PN +TL I ++
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
S VG Q H+L +K+ ++ V S++ +Y K GLV++ K+F M N TW+ M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G+A + + + ++F + G D Y F+++L+ + + + G Q
Sbjct: 192 SGYATRGRVEE--------AIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQ 242
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH +T+K G L V + ALV MY KC + A ++F R I+W++M+TG++ +
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
S +A++LF M AG++P++ T VG L ACS+ + E + K + +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATT 361
Query: 530 CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLL 584
L+DM+ + GC+ +A FD +++ D +W+ I+G ++ + E L Y +
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDV----ALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 585 KLKPKD 590
+ P D
Sbjct: 418 GIIPND 423
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 222/429 (51%), Gaps = 25/429 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +K G + LV +Y KC ++ EA K+FD+ N ++W+++++GY QN +
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F M AG P+ T+ L ACS + + GKQ+H++++K E +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ G L A K F+ ++E++V WT++I +N + + L + +M + GI PN
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ T+ S+ C ++ +L +G QVH IK G+ + + +++ +Y KCG +++ +F
Sbjct: 423 DPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFR 482
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSI 394
+ ++V+WNAMI+G +HNG G EAL +F ++ + GM+PD TF +I
Sbjct: 483 RTPNKDVVSWNAMISG------------LSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 395 LTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-- 451
++ CS +E+G + ++ + G V +V++ + G+++ A + F+E +
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA-KEFIESANID 589
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
L W +++ NH + E ++ G R + T+V +Y ALG
Sbjct: 590 HGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS-TYV-------QLSGIYTALGR 641
Query: 512 FEMMQKEYK 520
+++ +K
Sbjct: 642 MRDVERVWK 650
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 128/222 (57%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+ + G K + V +L C + L + +H+ ++K G + F T LV++Y K G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A+K FD L +V WTSLISGYVQNS E A+ ++ M AG P + T+ + L A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CSSL ++ LGKQ+H + +K+ + +G++L ++YS CGSL F R K+V+SW
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+I NG+ + L F +ML+EG++P++ T +I S C
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
T G + S+L+ C + +L + +H H +K G + + + L +Y KCG++E
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+ VF P +VVSW ++ISG N Q + A+ +F +ML G P +VT ++ACS
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIREKNVMS- 243
+ G + ++ Q D V + C L S G L A K F I N+
Sbjct: 536 HKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA-KEF--IESANIDHG 591
Query: 244 ---WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE--FTLTSISSVCGTMLSL-RVGAQ 297
W ++ AC +G+ G+ K+++ G + + L+ I + G M + RV
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 298 VHSLGI 303
+ + G+
Sbjct: 652 MRANGV 657
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 326/608 (53%), Gaps = 52/608 (8%)
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC +L +R Q+HA+ D N L Y+ G +A F RI ++NVMS
Sbjct: 54 ACQALPLLR---QLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRNVMS 110
Query: 244 WTTVIGACGENGE---------------------AVQGLR----------FFSKMLSEGI 272
W +IG +NG+ V GL FF M EG+
Sbjct: 111 WNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 170
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
QP+E+ L S+ C + + G QVH+ ++ G ++ V +S+ ++Y++CG + + +
Sbjct: 171 QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEA 230
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTF 391
+ +N+V+ N I+G Q NG E AL F + +G++ + TF
Sbjct: 231 ALRALPSLNIVSCNTTISGRTQ------------NGDAEGALEFFCLMRGAGVEANAVTF 278
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S +T CS L AL QG+QIHAL +KTG V V T+LV+MY +CG + + RV +E S
Sbjct: 279 VSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSG 338
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
L+ ++MI+ + H +A+ LF+ M+ AG PN+VTF+ L ACS++G+ E +
Sbjct: 339 TDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNC 398
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FE+M K Y ++P + HY C++D+ R GC+ EA D I M +P+ VIW ++ C+
Sbjct: 399 FELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQK 458
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
++ AE++++L P D SY +L +I ++ RWEDV+ V+ RE+ + + SW+
Sbjct: 459 KFDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWV 518
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF---ELTDEES--ASVY 686
+K +++ F D H + EI + L+E++ + + GY S ++ DEE + +
Sbjct: 519 ELKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAH 578
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLAIAF L+ P PI V+K+ +C DCH IK+++ + REI+VRD R H F +
Sbjct: 579 HSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKD 638
Query: 747 GHCTCRDF 754
G C+C D+
Sbjct: 639 GKCSCGDY 646
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 175/351 (49%), Gaps = 13/351 (3%)
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+ Y K G++E A+K+FD +P NV +W ++++G + E ++ F M G P
Sbjct: 113 ILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 172
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
LG+ C+ L + G+Q+HAYVV+ + D VG+SL +Y CG L A
Sbjct: 173 DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL 232
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ N++S T I +NG+A L FF M G++ N T S + C + +L
Sbjct: 233 RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALA 292
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+H+L IK G + V S++++Y +CG + +++++ S +LV +AMI+ +
Sbjct: 293 QGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG 352
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
H G +A+ +F ++ ++G +P+ TF ++L CS ++G L
Sbjct: 353 -----------FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 401
Query: 414 TLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMIT 462
KT G V T +V++ + G + A + + M + + W ++++
Sbjct: 402 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 452
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 4/297 (1%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
SLGF A+ EG + SL + C + + + +HA++V++G +D V + L
Sbjct: 158 SLGFFFAMR--REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSL 215
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++Y +CG + + + LP +N+VS + ISG QN E A+ F M AG
Sbjct: 216 AHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANA 275
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT +A+T+CS L ++ G+QIHA +K + V SL +YS CG L + +
Sbjct: 276 VTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLE 335
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+++ + +I A G +G + + F +M++ G +PNE T ++ C G
Sbjct: 336 YSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEG 395
Query: 296 AQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
L K G +++ I+ L + G ++EA+ L M + V W +++
Sbjct: 396 MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 452
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
FS I C L L Q +HA +G +D L+ Y G A +F +
Sbjct: 48 FSHIFRACQALPLLRQ---LHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIP 104
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
R ++SW +I G+ + A +LF++M N T+ +A +N+G+ E+LG
Sbjct: 105 KRNVMSWNILIGGYVKNGDLETARKLFDEMPAR----NVATWNAMVAGLTNSGLNEESLG 160
Query: 511 YFEMMQKE 518
+F M++E
Sbjct: 161 FFFAMRRE 168
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/639 (31%), Positives = 355/639 (55%), Gaps = 17/639 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++ SL+ C + S+ IH+ +++ V+ LVN+Y G + +A
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA 300
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +F N+ R +++SW ++IS YVQN A+ + P ++T +AL ACSS
Sbjct: 301 EFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSP 360
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ GK +HA V++ + + VGNSL ++Y C S+ A K F + +V+S+ +I
Sbjct: 361 GALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLI 420
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR-VGAQVHSLGIKLGY 307
G + + ++ FS + S GI+PN T+ +I + L G +H+ I+ G+
Sbjct: 421 GGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGF 480
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+ V NS++ +Y KCG ++ + +F+ +++ N+V+WNA+IA +AQ+
Sbjct: 481 LSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQL-----------G 529
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
G EAL +F + +G K D + L+ C+ L +LE+G Q+H L +K+G SD V
Sbjct: 530 HGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVN 589
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
A ++MY KCG++ ++ + + R W ++I+G+A + +A + F+ M+ G +P
Sbjct: 590 AAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKP 649
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ VTFV L+ACS+AG+V + + Y+ M + + P + H +C++D+ RLG EA F
Sbjct: 650 DYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERF 709
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I++M PN++IW ++ R H N+E+G AA++LL+L P D +Y +L +++ + RW
Sbjct: 710 IEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARW 769
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
DV +++ + +++ SW+++K++V +F D H + +I+ LDE++ K +
Sbjct: 770 VDVDKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREV 829
Query: 668 GYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNTP 701
GY S L TDEE HSEKLA+A+GL+ P
Sbjct: 830 GYIADTSSALHDTDEEQKEQNLWNHSEKLALAYGLIVVP 868
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 268/546 (49%), Gaps = 27/546 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG +++ +++ C + ++ + +H++ +G V L+ ++G G +++
Sbjct: 139 EGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQD 198
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+K+FD + + +S ++IS Y VF DM G P TL + ++ C+S
Sbjct: 199 AEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 258
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ G IH+ ++ + +V N+L ++YS G L+ A F + ++++SW T+
Sbjct: 259 ADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 318
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + +N + L+ ++ PN T +S C + +L G VH++ ++L
Sbjct: 319 ISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSL 378
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
NL V NS++ +Y KC +++A+K+F M ++V++N +I G+A + D
Sbjct: 379 QRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLED---------- 428
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ-GEQIHALTLKTGFLSDVVVG 426
GT+A+ +FS + S+G+KP+ T +I + L G +HA ++TGFLSD V
Sbjct: 429 -GTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVA 487
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L+ MY KCG +E ++ +F ++ + ++SW ++I A +AL+LF DM AG +
Sbjct: 488 NSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNK 547
Query: 487 PNQVTFVGALAACSN-----AGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGC 540
++V L++C++ GM LG + + Y + M DM+ + G
Sbjct: 548 LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM-------DMYGKCGK 600
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK-DCESYAMLLD 599
+ E + P + W+ I+G ++G + +Q++ + K D ++ LL
Sbjct: 601 MNEMLQMVPDQAIRPQQC-WNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLS 659
Query: 600 IFVSAG 605
AG
Sbjct: 660 ACSHAG 665
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 146/516 (28%), Positives = 257/516 (49%), Gaps = 32/516 (6%)
Query: 79 SLLQECVNR---KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
SL+ C R + ++ IHA + G + ++ T L+++YG G + +A+++F +
Sbjct: 46 SLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEM 105
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT-LGTALTACSSLESIRLG 194
P NVVSWT+L+ N E + + M G P N T ++ C SLE+ G
Sbjct: 106 PERNVVSWTALMVALSSNGYLEETLRAYRQMRREG-VPCNANAFATVVSLCGSLENEVPG 164
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
Q+ ++V+ ++ SV NSL +++ G + A K F+R+ E + +S +I
Sbjct: 165 LQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQ 224
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + FS M G++P+ TL S+ SVC + G+ +HSL ++ S++ V
Sbjct: 225 GICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVI 284
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y G + +A+ LF MS +L++WN MI+ + Q + T+AL
Sbjct: 285 NALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCN-----------STDALK 333
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+L + P+ TFSS L CS AL G+ +HA+ L+ +++VG +L+ MY
Sbjct: 334 TLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYG 393
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KC +E A +VF M T ++S+ +I G+A +A+Q+F + AG++PN +T +
Sbjct: 394 KCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMIN 453
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKP--VMDHYMC--LIDMFVRLGCIEEAFDFIKK 550
+ +++ ++ + Y I+ + D Y+ LI M+ + G +E + +
Sbjct: 454 IHGSFTSSNDLHN----YGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
+ N V W+ IA N +LG E+ LKL
Sbjct: 510 IT-NKNIVSWNAIIA-----ANAQLGH--GEEALKL 537
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 215/437 (49%), Gaps = 20/437 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL---ESI 191
+P +W + +SG V+ + A + M E G + L + +TAC E I
Sbjct: 1 MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G IHA + + +G +L LY + G ++ A + F + E+NV+SWT ++ A
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVAL 120
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
NG + LR + +M EG+ N ++ S+CG++ + G QV S I G + +
Sbjct: 121 SSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQV 180
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GT 370
V NS++ ++ G V +A+KLFD M + ++ NAMI+ + +H G +
Sbjct: 181 SVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMIS------------MYSHQGICS 228
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+ +FS + G++PD T S++++C+ G IH+L L++ S V V ALV
Sbjct: 229 KCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALV 288
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
NMY G++ A +F MS R LISW +MI+ + + S AL+ + PN +
Sbjct: 289 NMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHL 348
Query: 491 TFVGALAACSNAGMVYEA-LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
TF AL ACS+ G + + + + ++Q + ++ + LI M+ + +E+A +
Sbjct: 349 TFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGN--SLITMYGKCNSMEDAEKVFQ 406
Query: 550 KMDFEPNEVIWSVFIAG 566
M + V ++V I G
Sbjct: 407 SMPTH-DVVSYNVLIGG 422
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/696 (29%), Positives = 359/696 (51%), Gaps = 64/696 (9%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L+ +Y L+Q C R+S A+ +H H++K G D +V L+N + C
Sbjct: 68 SMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCS 127
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
NM +A +VF+ ++ VSW S+++GY++ E A H++ M
Sbjct: 128 NMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQM----------------- 170
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
E NS+ L+ G + A K F+ + EK++++
Sbjct: 171 ----------------------PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVT 208
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W+ +I +N + +R F M G+ +E S S C +L + +G +HSL +
Sbjct: 209 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSL 268
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAK- 360
K+G S + ++N+++Y+Y KCG + A+KLFD ++L++WN+MI+G+ + ++D AK
Sbjct: 269 KIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKA 328
Query: 361 -----------------DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
+ ++ E L++F ++ SG KPD T S+++ C+RL A
Sbjct: 329 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 388
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
LEQG+ +HA + G +V++GT L++MY KCG +E A VF M + + +W ++I G
Sbjct: 389 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 448
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
A + L +L +F +M V PN++TF+G L AC + G+V E +F M ++KI+P
Sbjct: 449 LAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQP 508
Query: 524 VMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL 583
+ HY C++D+ R G ++EA + + +M P+ W + C++HG+ E+G +L
Sbjct: 509 NVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKL 568
Query: 584 LKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPN 643
++L+P + +L +I+ S G+W+DV ++ + + ++ + S I ++ F
Sbjct: 569 IELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAG 628
Query: 644 DGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLL 698
D HP I +L E+ K K GY + L D +ES HSEKLAIAFGL+
Sbjct: 629 DKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLI 688
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
N +PI ++K+ +C DCH K+I+ R+I+
Sbjct: 689 NISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIV 724
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 32/332 (9%)
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ YA++ ++ S + ++ +D +++F+ + + N WN MI + Q
Sbjct: 7 IRETYAASRLIKFSTHFPFIH---IDYTRRIFNFIENTNCFMWNMMIRAYIQT------- 56
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
N A +++ + S+ + D YT+ ++ CS + + +Q+H LK GF SD
Sbjct: 57 ----NSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSD 112
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
V V L+N + C + A RVF E S +SW S++ G+ +A ++ M
Sbjct: 113 VYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPE 172
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYF-EMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
+ + V G+V EA F EM++K+ M + LI F +
Sbjct: 173 RSIIASNSMIV----LFGMRGLVVEACKLFDEMLEKD------MVTWSALIACFQQNEMY 222
Query: 542 EEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
EEA F + K+ +EV+ ++ C + +G LK+ ESY L
Sbjct: 223 EEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGT---ESYINLQ 279
Query: 599 DIFVSA-GRWEDVAVVKNLTREEKLSETDDWS 629
+ + + D+ V + L E L + W+
Sbjct: 280 NALIYMYSKCGDIMVARKLFDEAYLLDLISWN 311
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/696 (29%), Positives = 367/696 (52%), Gaps = 16/696 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKC 122
++L G + ++ +++ C +L H+ ++ G + + L+ Y K
Sbjct: 97 AMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKL 156
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTA 181
G + +A++VFD +P ++V+W S++ GYV N LA+ F +M E + V + A
Sbjct: 157 GMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAA 216
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC ++ G+++HAYV+++ E D VG SL +Y CG++ SA F + + V
Sbjct: 217 LAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTV 276
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W +IG NG + F +M +EG Q T ++ + C S G VH
Sbjct: 277 VTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGY 336
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+ + ++ + +++ +Y K G V ++ +F M++ LV+WN MIA + + K+
Sbjct: 337 VTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAY-----MYKE 391
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EA+++F +L + + PD +T S+++ L L Q Q+H+ ++ +
Sbjct: 392 MYN------EAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGE 445
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ +V A+++MY +CG + + ++F +M+ + +ISW ++I G+A H AL++F +M
Sbjct: 446 NTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMK 505
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G++PN+ TFV L ACS +GM E F +MQ++Y I P ++HY C+ D+ R G +
Sbjct: 506 SNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDL 565
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
E FI+ + P IW + R ++++ YAAE++ +L+ + Y +L ++
Sbjct: 566 REVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMY 625
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
AGRWEDV +++ E+ L TD S + + SF D HPQS I +V D L
Sbjct: 626 ADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLS 685
Query: 662 EKAKCFGYKQQESFELTDEESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K Y + S ++ ++ HS +LA+ FGL+++ +PILV K+ +C C
Sbjct: 686 RKIGETDYPRNLSDPISLTSRRTIIPNKHSVRLAVVFGLISSEARAPILVKKNVRICNHC 745
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H+ +K+I+ + R I+V D+ H+F++G C C D+
Sbjct: 746 HHALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDY 781
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 144/295 (48%), Gaps = 20/295 (6%)
Query: 213 GNSLCSL---YSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
G SL SL ++ G ++ A+ A + VI + G L + ML+
Sbjct: 43 GPSLKSLVLSHAAAGRMHDALAAVRS--SPDAFLHNVVIRGFADAGLPEAALAAYRAMLA 100
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-ASNLRVRNSIMYLYLKCGLVD 328
G +P+ FT + C + +L G HS I+LG S + NS++ Y K G+V
Sbjct: 101 AGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVA 160
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSS-GMKP 386
+A+++FDGM ++VTWN+M+ G+ NG G AL F +++ ++
Sbjct: 161 DAERVFDGMPVRDIVTWNSMVDGYVS------------NGLGALALDCFREMHEGLQVQH 208
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
D + L C AL QG ++HA ++ G DV VGT+L++MY KCG I A +F
Sbjct: 209 DGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMF 268
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
M +RT+++W MI G+A + +A F M G + VT + LAAC+
Sbjct: 269 ATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQ 323
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 42/224 (18%)
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-SDVVVGTALV 430
AL+ + + ++G +PD +TF ++ C+RL ALE+G H+ ++ G + S+V G +L+
Sbjct: 91 ALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLL 150
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQ 489
Y K G + A RVF M R +++W SM+ G+ ++ L AL F +M V+ +
Sbjct: 151 AFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDG 210
Query: 490 VTFVGALAAC-----------------------------------SNAGMVYEALGYFEM 514
V + ALAAC G + A G F
Sbjct: 211 VGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFAT 270
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
M + + C+I + GC EEAFD +M E ++V
Sbjct: 271 MPSRTVVT-----WNCMIGGYALNGCPEEAFDCFVQMKAEGHQV 309
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/680 (32%), Positives = 364/680 (53%), Gaps = 37/680 (5%)
Query: 97 HAHIVKTG---SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYV 151
HA +K G HQ F L+++Y + G + +AQ++F R +VV+W +++S V
Sbjct: 191 HAFALKNGLLHGHQRF-AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 249
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDT 210
Q+ + A+ DM+ G P VT +AL ACS LE + +G+++HAYV+K + ++
Sbjct: 250 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANS 309
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V ++L +Y+T + A + F+ + + K + W +I + G + LR F++M
Sbjct: 310 FVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARME 369
Query: 269 SE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+E G P E T+ S+ C + VH +K G A N V+N++M +Y + G
Sbjct: 370 AEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 429
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAG-----H-AQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
D A+++F + ++V+WN +I G H A LA++ +L
Sbjct: 430 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLARE--------------MQQLEE 475
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
G+ P+ T ++L C+ L A +G++IH ++ +DV VG+ALV+MY KCG +
Sbjct: 476 GGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLAL 535
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACS 500
+ VF + R I+W +I + H L +A LF+ M +G RPN+VTF+ ALAACS
Sbjct: 536 SRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACS 595
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-I 559
++GMV L F M++++ ++P D C++D+ R G ++EA+ + M+ +V
Sbjct: 596 HSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSA 655
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
WS + CR H N+ LG A E+LL+L+P++ Y +L +I+ +AG+W A V++ R
Sbjct: 656 WSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRR 715
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FE 676
+++ SWI + ++ F + HP S E+ ++ L + GY S +
Sbjct: 716 RGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHD 775
Query: 677 LTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
+ D + A+V HSEKLAIAFGLL + I V K+ +C DCH K ++ + REI+
Sbjct: 776 MDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIV 835
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
+RD +R H F NG C+C D+
Sbjct: 836 LRDVRRFHHFRNGQCSCGDY 855
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 287/639 (44%), Gaps = 94/639 (14%)
Query: 61 EALSVLTEGPKVQTSSYVSL---LQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFL 115
ALS +T Q + +L ++ + +A IHA ++ G V L
Sbjct: 43 RALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANAL 102
Query: 116 VNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+ Y +CG + A +VF ++ + VS+ SLIS + + A+ ML G+
Sbjct: 103 LTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPL 162
Query: 174 TNVTLGTALTACSSLE----SIRLGKQIHAYVVKYQT--EDDTSVGNSLCSLYSTCGSLN 227
T+ TL + L A S L ++RLG++ HA+ +K N+L S+Y+ G +
Sbjct: 163 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 222
Query: 228 SAIKAFNRIR--EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
A + F +V++W T++ ++G + ++ M++ G++P+ T S
Sbjct: 223 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 282
Query: 286 CGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNL 342
C + L VG ++H+ IK A+N V ++++ +Y V +A+++FD + S L
Sbjct: 283 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 342
Query: 343 VTWNAMIAGHAQM-MDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSR 400
WNAMI G+AQ MD EAL +F+++ + +G P T +S+L C+R
Sbjct: 343 GMWNAMICGYAQAGMD------------EEALRLFARMEAEAGFVPCETTMASVLPACAR 390
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
A E +H +K G + V AL++MY + G+ + A R+F + ++SW ++
Sbjct: 391 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 450
Query: 461 ITGFANHSLSHQALQLFEDMLL---AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
ITG A QL +M GV PN +T + L C A + A G K
Sbjct: 451 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC--AILAAPARG------K 502
Query: 518 E---YKIKPVMDHYM----CLIDMFVRLGCI---EEAFDFIKKM---------------- 551
E Y ++ +D + L+DM+ + GC+ FD + +
Sbjct: 503 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 562
Query: 552 ----------------DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCE 592
+ PNEV + +A C G ++ G F+A E+ ++P +
Sbjct: 563 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP-D 621
Query: 593 SYAMLLDIFVSAGRWEDV-AVVKNL-TREEKLSETDDWS 629
A ++DI AGR ++ A+V ++ T E+++S WS
Sbjct: 622 ILACVVDILGRAGRLDEAYAMVTSMETGEQQVSA---WS 657
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++ S+L C ++ + E +H ++VK G + FV L+++Y + G + A+++F
Sbjct: 379 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 438
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDML---EAGNYPTNVTLGTALTACSSLESI 191
+ +VVSW +LI+G V A + +M E G P +TL T L C+ L +
Sbjct: 439 VDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAP 498
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK+IH Y V++ + D +VG++L +Y+ CG L + F+R+ +N ++W +I A
Sbjct: 499 ARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAY 558
Query: 252 GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYAS 309
G +G + F +M + G +PNE T + + C + G Q+ H++ G
Sbjct: 559 GMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEP 618
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMI 349
+ ++ + + G +DEA + M + W+ M+
Sbjct: 619 TPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML 660
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/611 (32%), Positives = 331/611 (54%), Gaps = 26/611 (4%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA VKT D F + L+N+Y K G + EA+ +FD +P N VSW ++ISGY
Sbjct: 139 HALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELA 198
Query: 157 ELAIHVFLDML--EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ A +F M E G + L+A + + G+Q+H+ +K SV N
Sbjct: 199 DEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVAN 258
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+L ++Y CGSL A+K F KN ++W+ ++ + G++ + L+ F M G P
Sbjct: 259 ALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELP 318
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+EFTL + + C ++ G Q+H +KLGY L V ++++ +Y KCG + +A+K F
Sbjct: 319 SEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGF 378
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
+ + ++V W ++I G+ Q NG E AL+++ K+ G+ P+ T +S
Sbjct: 379 ECIQQPDVVLWTSIITGYVQ------------NGDYEGALNLYGKMQLGGVIPNDLTMAS 426
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L CS L AL+QG+Q+HA +K F ++ +G+AL MY KCG ++ R+F M R
Sbjct: 427 VLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARD 486
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+ISW +MI+G + + ++ L+LFE M L G +P+ VTFV L+ACS+ G+V YF+
Sbjct: 487 VISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFK 546
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
MM E+ I P ++HY C++D+ R G + EA +FI+ + +W + +A + H +
Sbjct: 547 MMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDY 606
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+LG YA E+L++L + +Y +L I+ + G+WEDV V+ + + +++ SWI +
Sbjct: 607 DLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIEL 666
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK--------QQESFELTDEESASV 685
K + F D +HPQ EI L L + K GY+ + S +L D+E +
Sbjct: 667 KSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLPPETISDDLKDQEDS-- 724
Query: 686 YHSEKLAIAFG 696
H +L +G
Sbjct: 725 -HEIQLRFIYG 734
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 160/514 (31%), Positives = 244/514 (47%), Gaps = 28/514 (5%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L C K L +HA I+ TGS + L+N+Y KC + +A VFD++ +V
Sbjct: 17 LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDV 76
Query: 141 VSWTSLISGYVQNSQPELAIHVF-----LDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
VSW LI+ + Q ++HV L M P TL TA S+L R G+
Sbjct: 77 VSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGR 136
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q HA VK D +SL ++Y G + A F+ + E+N +SW T+I
Sbjct: 137 QAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQE 196
Query: 256 EAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
A + F M E G NEF TS+ S + + G QVHSL +K G + V
Sbjct: 197 LADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSV 256
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N+++ +Y+KCG +++A K F+ + N +TW+AM+ G AQ D K AL
Sbjct: 257 ANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDK-----------AL 305
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F ++ SG P +T ++ CS A+ +G Q+H +LK G+ + V +ALV+MY
Sbjct: 306 KLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMY 365
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I A + F + ++ WTS+ITG+ + AL L+ M L GV PN +T
Sbjct: 366 AKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMA 425
Query: 494 GALAACSNAGMVYEALGYFEMMQK---EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
L ACSN AL + M +Y + L M+ + G +++ + +
Sbjct: 426 SVLKACSNLA----ALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWR 481
Query: 551 MDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQL 583
M +VI W+ I+G ++G G E++
Sbjct: 482 M--PARDVISWNAMISGLSQNGRGNEGLELFEKM 513
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 220/424 (51%), Gaps = 32/424 (7%)
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
AL C+ + +R G+ +HA ++ + T + NSL +LY+ C + A F+ I K+
Sbjct: 16 ALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKD 75
Query: 241 VMSWTTVIGACGE---NGEAVQGLRFFSK--MLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
V+SW +I A + + ++ + F + M + I PN TLT + + T+ R G
Sbjct: 76 VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q H+L +K + ++ +S++ +Y K GLV EA+ LFD M N V+W MI+G+A
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYAS- 194
Query: 356 MDLAKDDLSAHNGGTEALSIFS--KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+LA EA +F + G + + F+S+L+ + + + G Q+H+L
Sbjct: 195 QELAD----------EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSL 244
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K G + V V ALV MY KCG +E A + F + I+W++M+TGFA S +A
Sbjct: 245 AMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKA 304
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CL 531
L+LF DM +G P++ T VG + ACS+A + E +M K+ + Y+ L
Sbjct: 305 LKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGR---QMHGYSLKLGYELQLYVLSAL 361
Query: 532 IDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKL 586
+DM+ + G I +A F+ I+ +P+ V+W+ I G ++G+ E L Y QL +
Sbjct: 362 VDMYAKCGSIVDARKGFECIQ----QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGV 417
Query: 587 KPKD 590
P D
Sbjct: 418 IPND 421
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 220/427 (51%), Gaps = 27/427 (6%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H+ +K G V LV +Y KCG++E+A K F+ N ++W+++++G+ Q
Sbjct: 241 VHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGD 300
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ A+ +F DM ++G P+ TL + ACS +I G+Q+H Y +K E V ++
Sbjct: 301 SDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSA 360
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ CGS+ A K F I++ +V+ WT++I +NG+ L + KM G+ PN
Sbjct: 361 LVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPN 420
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ T+ S+ C + +L G Q+H+ IK ++ + + +++ +Y KCG +D+ ++F
Sbjct: 421 DLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFW 480
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M ++++WNAMI+G LS + G E L +F K+ G KPD TF ++L
Sbjct: 481 RMPARDVISWNAMISG-----------LSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLL 529
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMST--R 452
+ CS + +++G + ++ V A +V++ + G++ A + F+E +T
Sbjct: 530 SACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEA-KEFIESATVDH 588
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM--VYEALG 510
L W ++ NH D L ++ +G+L + + + +Y ALG
Sbjct: 589 GLCLWRILLAASKNH----------RDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALG 638
Query: 511 YFEMMQK 517
+E +++
Sbjct: 639 KWEDVER 645
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/599 (33%), Positives = 339/599 (56%), Gaps = 13/599 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G S++ +L+ C L N++IIHAH++K+ + FV T V++Y KCG +E+A
Sbjct: 48 GITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDA 107
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF +P ++ SW +++ G+ Q+ + + M +G P VT+ + + +
Sbjct: 108 HNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRV 167
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSWTT 246
+S+ ++++ ++ D SV N+L + YS CG+L SA F+ I ++V+SW +
Sbjct: 168 KSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNS 227
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I A + V+ + + ML G P+ T+ ++ S C +L G VHS G+KLG
Sbjct: 228 MIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLG 287
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
S++ V N+++ +Y KCG V A+ LF+GMS V+W MI+ +A+ K +S
Sbjct: 288 CDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAE-----KGYMS-- 340
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA+++F+ + ++G KPDL T ++++ C + ALE G+ I ++ G +VVV
Sbjct: 341 ----EAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVC 396
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL++MY KCG A +F M+ RT++SWT+MIT A + AL+LF ML G++
Sbjct: 397 NALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMK 456
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN +TF+ L AC++ G+V L F MM ++Y I P +DHY C++D+ R G + EA +
Sbjct: 457 PNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALE 516
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
IK M FEP+ IWS ++ C+ HG ME+G Y +EQL +L+P+ Y + +I+ SA
Sbjct: 517 IIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEM 576
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
WE VA ++ + ++ ++ S I++ K F D HP++ I+ +LD L ++K
Sbjct: 577 WEGVAAIRRNMKYLQVRKSPGQSIIQVNGKPTIFTVEDRDHPETLYIYDMLDGLTSRSK 635
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 221/472 (46%), Gaps = 25/472 (5%)
Query: 136 PRIN----VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
P IN + +W S V + A+ +F M ++G P N T L AC+ L +
Sbjct: 10 PCINRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHL 69
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
R + IHA+V+K + + V + +Y CG L A F + +++ SW ++
Sbjct: 70 RNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGF 129
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
++G + M GI+P+ T+ + + SL V+S GI++G ++
Sbjct: 130 AQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDV 189
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSH--VNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
V N+++ Y KCG + A+ LFD ++ ++V+WN+MIA +A + H
Sbjct: 190 SVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYA--------NFEKH--- 238
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+A++ + + G PD+ T ++L+ C + AL G +H+ +K G SDV V L
Sbjct: 239 VKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTL 298
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+ MY KCG + A +F MS +T +SWT MI+ +A +A+ LF M AG +P+
Sbjct: 299 ICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDL 358
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT + ++ C G + E + + +K + LIDM+ + G +A +
Sbjct: 359 VTVLALISGCGQTGAL-ELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFY 417
Query: 550 KMDFEPNEVIWSVFIAGCRRHGN----MELGFYAAEQLLKLKPKDCESYAML 597
M V W+ I C +G+ +EL F E + +KP A+L
Sbjct: 418 TMA-NRTVVSWTTMITACALNGDVKDALELFFMMLE--MGMKPNHITFLAVL 466
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 116/223 (52%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G S+ ++LL C+ K+L + ++H+H VK G D V+ L+ +Y KCG+
Sbjct: 248 MLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGD 307
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ A+ +F+ + VSWT +IS Y + A+ +F M AG P VT+ ++
Sbjct: 308 VHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISG 367
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C ++ LGK I Y + +D+ V N+L +Y+ CG N A + F + + V+SW
Sbjct: 368 CGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSW 427
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
TT+I AC NG+ L F ML G++PN T ++ C
Sbjct: 428 TTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACA 470
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/582 (34%), Positives = 315/582 (54%), Gaps = 62/582 (10%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T ++AC L+SIR K++ Y++ + D + N + ++ CG + A + F+ +
Sbjct: 133 TYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARRLFDEM 192
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EKN++SW T+IG + G+ + R F M + ++ + + G
Sbjct: 193 PEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLGLIFAGR 252
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+HS +K G ++ V +++ +Y KCG +++AQ +FD M V WN++IAG+A
Sbjct: 253 QLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYA--- 309
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
H EALS++ ++ SG+K D +TFS I+ IC+RL +LE +Q HA ++
Sbjct: 310 --------LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVR 361
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
GF D+V TALV++Y K GRIE A VF M + +ISW ++I G+ NH +A+++
Sbjct: 362 HGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEM 421
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
FE ML G+ PN VTF+ L+ACS +G+ FE M +++KIKP HY C+I++
Sbjct: 422 FERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLG 481
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G ++EAF IK F+P +W+ + CR H N ELG +AAE+L + P+ +Y +
Sbjct: 482 REGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSNYVV 541
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
LL+I+ +GR E+ A +
Sbjct: 542 LLNIYNRSGRLEEAAAL------------------------------------------- 558
Query: 657 LDELVEKAKCFGYKQQESFELTD----EESASVYHSEKLAIAFGLLNTPIVSPILVVKST 712
++E +K GY Q+ F L D EE +YHSEKLAIAFGL+NT +P+ +V+S
Sbjct: 559 ---MLEISK-HGYVPQDKFLLPDVDEQEERVLLYHSEKLAIAFGLINTSDWTPLQIVQSH 614
Query: 713 TMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ IK+I +T REI+VRD+ R H F +G C+C D+
Sbjct: 615 RICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDY 656
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/543 (24%), Positives = 246/543 (45%), Gaps = 88/543 (16%)
Query: 15 ETKSRQPSSSLATLKDKNHTVSYQRSGSKL-----IQLNGNSEPVRSLGFQEALSVLTEG 69
ET+ R+PSS L +K V ++R L ++LNG +
Sbjct: 88 ETQLRKPSSELCGQIEK--LVFFKRYHEALELFEILELNGAYD----------------- 128
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
+ + +Y +L+ C+ KS+ + + +++ +G D ++ ++ ++ KCG M +A+
Sbjct: 129 --MDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDAR 186
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
++FD +P N++SW ++I G V A +FL M + + + T + A + L
Sbjct: 187 RLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRASAGLG 246
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
I G+Q+H+ +K D V +L +YS CGS+ A F+++ EK + W ++I
Sbjct: 247 LIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIA 306
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+G + + L + +M G++ + FT + I +C + SL Q H+ ++ G+
Sbjct: 307 GYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGL 366
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ +++ LY K G +++A+ +FD M H N+++WNA+IAG+ H G
Sbjct: 367 DIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAGYGN-----------HGRG 415
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ +F ++ GM P+ TF ++L+ CS
Sbjct: 416 VEAVEMFERMLHEGMVPNHVTFLAVLSACS------------------------------ 445
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLIS-----WTSMITGFANHSLSHQALQLFEDMLLAG 484
G +R +F MS I + MI L +A L +D A
Sbjct: 446 -----YSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKD---AP 497
Query: 485 VRPNQVTFVGALAACSNAGMVYE--ALGYFEMMQKEYKIKP-VMDHYMCLIDMFVRLGCI 541
+P + L AC V++ LG F +K Y + P + +Y+ L++++ R G +
Sbjct: 498 FKPTVNMWAALLTACR----VHKNFELGKFA-AEKLYGMGPEKLSNYVVLLNIYNRSGRL 552
Query: 542 EEA 544
EEA
Sbjct: 553 EEA 555
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/680 (32%), Positives = 364/680 (53%), Gaps = 37/680 (5%)
Query: 97 HAHIVKTG---SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYV 151
HA +K G HQ F L+++Y + G + +AQ++F R +VV+W +++S V
Sbjct: 189 HAFALKNGLLHGHQRF-AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 247
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDT 210
Q+ + A+ DM+ G P VT +AL ACS LE + +G+++HAYV+K + ++
Sbjct: 248 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANS 307
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V ++L +Y+T + A + F+ + + K + W +I + G + LR F++M
Sbjct: 308 FVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARME 367
Query: 269 SE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+E G P E T+ S+ C + VH +K G A N V+N++M +Y + G
Sbjct: 368 AEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 427
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAG-----H-AQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
D A+++F + ++V+WN +I G H A LA++ +L
Sbjct: 428 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLARE--------------MQQLEE 473
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
G+ P+ T ++L C+ L A +G++IH ++ +DV VG+ALV+MY KCG +
Sbjct: 474 GGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLAL 533
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACS 500
+ VF + R I+W +I + H L +A LF+ M +G RPN+VTF+ ALAACS
Sbjct: 534 SRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACS 593
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-I 559
++GMV L F M++++ ++P D C++D+ R G ++EA+ + M+ +V
Sbjct: 594 HSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSA 653
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
WS + CR H N+ LG A E+LL+L+P++ Y +L +I+ +AG+W A V++ R
Sbjct: 654 WSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRR 713
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FE 676
+++ SWI + ++ F + HP S E+ ++ L + GY S +
Sbjct: 714 RGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHD 773
Query: 677 LTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
+ D + A+V HSEKLAIAFGLL + I V K+ +C DCH K ++ + REI+
Sbjct: 774 MDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIV 833
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
+RD +R H F NG C+C D+
Sbjct: 834 LRDVRRFHHFRNGQCSCGDY 853
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 163/638 (25%), Positives = 284/638 (44%), Gaps = 92/638 (14%)
Query: 61 EALSVLTEGPKVQTSSYVSL---LQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFL 115
ALS +T Q + +L ++ + +A IHA ++ G V L
Sbjct: 41 RALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANAL 100
Query: 116 VNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+ Y +CG + A +VF ++ + VS+ SLIS + + A+ ML G+
Sbjct: 101 LTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPL 160
Query: 174 TNVTLGTALTACSSLE----SIRLGKQIHAYVVKYQT--EDDTSVGNSLCSLYSTCGSLN 227
T+ TL + L A S L ++RLG++ HA+ +K N+L S+Y+ G +
Sbjct: 161 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 220
Query: 228 SAIKAFNRIR--EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
A + F +V++W T++ ++G + ++ M++ G++P+ T S
Sbjct: 221 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 280
Query: 286 CGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNL 342
C + L VG ++H+ IK A+N V ++++ +Y V +A+++FD + S L
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
Query: 343 VTWNAMIAGHAQM-MDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSR 400
WNAMI G+AQ MD EAL +F+++ + +G P T +S+L C+R
Sbjct: 341 GMWNAMICGYAQAGMD------------EEALRLFARMEAEAGFVPCETTMASVLPACAR 388
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
A E +H +K G + V AL++MY + G+ + A R+F + ++SW ++
Sbjct: 389 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 448
Query: 461 ITGFANHSLSHQALQLFEDMLL---AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
ITG A QL +M GV PN +T + L C A + A G K
Sbjct: 449 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC--AILAAPARG------K 500
Query: 518 E---YKIKPVMDHYM----CLIDMFVRLGCI---EEAFDFIKKM---------------- 551
E Y ++ +D + L+DM+ + GC+ FD + +
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 560
Query: 552 ----------------DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCE 592
+ PNEV + +A C G ++ G F+A E+ ++P +
Sbjct: 561 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP-D 619
Query: 593 SYAMLLDIFVSAGRWEDV-AVVKNLTREEKLSETDDWS 629
A ++DI AGR ++ A+V ++ E+ + WS
Sbjct: 620 ILACVVDILGRAGRLDEAYAMVTSMEAGEQ--QVSAWS 655
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++ S+L C ++ + E +H ++VK G + FV L+++Y + G + A+++F
Sbjct: 377 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 436
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDML---EAGNYPTNVTLGTALTACSSLESI 191
+ +VVSW +LI+G V A + +M E G P +TL T L C+ L +
Sbjct: 437 VDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAP 496
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK+IH Y V++ + D +VG++L +Y+ CG L + F+R+ +N ++W +I A
Sbjct: 497 ARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAY 556
Query: 252 GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYAS 309
G +G + F +M + G +PNE T + + C + G Q+ H++ G
Sbjct: 557 GMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEP 616
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMI 349
+ ++ + + G +DEA + M + W+ M+
Sbjct: 617 TPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 658
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/599 (35%), Positives = 330/599 (55%), Gaps = 23/599 (3%)
Query: 89 SLSNAEIIHAHIVKTGSH---QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTS 145
S S + HA K S + FV T L+N+Y K G + +A++VFD + N VSW +
Sbjct: 135 SASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAA 194
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA-LTACSSLESIRLGKQIHAYVVKY 204
++SGY E A +F ML+ N + TA L+A S + +G Q+H V+K
Sbjct: 195 MVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKD 254
Query: 205 QTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFF 264
SV NSL ++Y+ +++A++ F +E+N ++W+ +I +NGEA R F
Sbjct: 255 GLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMF 314
Query: 265 SKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+M S G P EFT + + C M +L VG Q H L +KLG+ + + V+++++ +Y KC
Sbjct: 315 LQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKC 374
Query: 325 GLVDEAQKLFDGMSHVN-LVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSS 382
G + +A+ F + V+ +V W AMI GH Q NG EAL ++S+++
Sbjct: 375 GCIGDAKDGFHQLYDVDDVVLWTAMITGHVQ------------NGEHEEALMLYSRMDKQ 422
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G+ P T +S+L C+ L AL+ G+Q+HA LK F VGTAL MY KCG +E +
Sbjct: 423 GIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDS 482
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
VF M R +ISW S+I+ F+ H AL +FE+M L G P+ +TF+ L+ACS+
Sbjct: 483 MVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACSHM 542
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G+V YF M K+Y + P +DHY C++D+ R G ++EA DFI + + +W +
Sbjct: 543 GLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRAGQLKEAKDFIDSITIDHGTCLWRI 602
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
+ CR + ++G YA EQL++L +D +Y +L +I+ + +W DV V++L R +
Sbjct: 603 VLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGV 662
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEE 681
S+ SW+ + ++V+ F + HP+ AE V EL+ AK K +E F DE+
Sbjct: 663 SKDLGCSWVELYNRVHVFVVGEQQHPE-AENINV--ELIRLAK--HMKDEECFLFDDEK 716
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 24/289 (8%)
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLY--LKCGLVDEAQKLFDGMSHV--NLVTWNAM 348
R G +H +K G AS+ V NS++ Y L L+ A +F + ++ +WN++
Sbjct: 31 RTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSL 90
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS--GMKPDLYTFSSILTICSRLVALEQ 406
+ + LS H+ ALS F + SS + P ++F++ T +R+ +
Sbjct: 91 L-----------NPLSRHH-PVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASA 138
Query: 407 GEQIHALTLK---TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
G HAL K + ++V V TAL+NMY K G + A RVF M R +SW +M++G
Sbjct: 139 GAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSG 198
Query: 464 FANHSLSHQALQLFEDMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A S +A +LF ML + N+ L+A S + ++ K+ +
Sbjct: 199 YATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVG 258
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
V L+ M+ + C++ A E N + WS I G ++G
Sbjct: 259 FVSVEN-SLVTMYAKAECMDAAMRVFGSSK-ERNSITWSAMITGYAQNG 305
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 334/617 (54%), Gaps = 12/617 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V +Y S+ + C LS A +HAH +K D V T +V+VY K ++ +A
Sbjct: 232 GLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDA 291
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++ F +LP V + +++ G V+ A+ +F M +G V+L +AC+ +
Sbjct: 292 RRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEV 351
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ G Q+H +K + D V N++ LY C +L A F + +++ +SW +I
Sbjct: 352 KGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAII 411
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +N + + ++ML G++P++FT S+ C + SL G+ VH IK G
Sbjct: 412 AALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLG 471
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V ++++ +Y KCG++ EAQKL D + LV+WN++I+G S +
Sbjct: 472 LDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISG-----------FSLNKQ 520
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA FS++ G+KPD +T++++L C+ L +E G+QIH +K L D + +
Sbjct: 521 SEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISST 580
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG + + +F + +SW +MI G+A H +AL++FE M A V PN
Sbjct: 581 LVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPN 640
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
TFV L ACS+ G++ + YF +M YK++P ++H+ C++D+ R +EA FI
Sbjct: 641 HATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFI 700
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M E + VIW ++ C+ ++E+ AA +L+L P D Y +L +++ +G+W
Sbjct: 701 RSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWV 760
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV+ + L R+ +L + SWI ++ +++ F D +HP+S E++++L+ L+ + K G
Sbjct: 761 DVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSG 820
Query: 669 YKQQES-FELTDEESAS 684
Y+ + F DEE ++
Sbjct: 821 YEPASALFAEVDEEGST 837
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 261/513 (50%), Gaps = 26/513 (5%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LL+ C + L+ IHA VKTG D + LV++YGKC ++E+A + F + N
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
VSW + I+G VQN Q + +F+ M G + + +C+++ + +Q+HA
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+ +K + D VG ++ +Y+ SL A +AF + V + ++ G +
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L+ F M GI + +L+ + S C + G QVH L IK G+ ++ VRN+I+
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
LY KC + EA +F M + V+WNA+IA L + + ++ +++
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAA-----------LEQNECYEDTIAYLNEM 430
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
GM+PD +T+ S+L C+ L +LE G +H +K+G D V + +V+MY KCG I
Sbjct: 431 LRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMI 490
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
A ++ + + L+SW S+I+GF+ + S +A + F +ML GV+P+ T+ L C
Sbjct: 491 TEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTC 550
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFE 554
+N + LG ++ + K + + D Y+ L+DM+ + G + ++ F+ +K+DF
Sbjct: 551 ANLATI--ELGK-QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDF- 606
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
V W+ I G HG GF A E +++
Sbjct: 607 ---VSWNAMICGYALHGQ---GFEALEMFERMQ 633
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 156/564 (27%), Positives = 265/564 (46%), Gaps = 55/564 (9%)
Query: 74 TSSYVSLLQECVN--RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
T+++ L Q C R +L+ + HA ++ +G FV L+ +Y +CG A+ V
Sbjct: 2 TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61
Query: 132 FD-------------------------------NLPRINVVSWTSLISGYVQNSQPELAI 160
FD +P +VVSW +L+SGY Q ++
Sbjct: 62 FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV 121
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+ ++M G P TL L AC LE + LG QIHA VK E D G++L +Y
Sbjct: 122 GLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMY 181
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
C SL A++ F+ + E+N +SW I C +N + +GL F +M G+ ++
Sbjct: 182 GKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYA 241
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
S+ C + L Q+H+ IK ++++ V +I+ +Y K + +A++ F + +
Sbjct: 242 SVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNH 301
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+ NAM+ G L + L G EAL +F + SG+ D+ + S + + C+
Sbjct: 302 TVQACNAMMVG------LVRTGL-----GAEALQLFQFMTRSGIGFDVVSLSGVFSACAE 350
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ QG Q+H L +K+GF DV V A++++Y KC + A VF EM R +SW ++
Sbjct: 351 VKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAI 410
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ-KEY 519
I + + +ML G+ P+ T+ L AC AG+ ++L Y ++ K
Sbjct: 411 IAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKAC--AGL--QSLEYGSVVHGKAI 466
Query: 520 KIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG- 576
K +D ++ ++DM+ + G I EA ++ + V W+ I+G + E
Sbjct: 467 KSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQ-ELVSWNSIISGFSLNKQSEEAQ 525
Query: 577 -FYAAEQLLKLKPKDCESYAMLLD 599
F++ + +KP D +YA +LD
Sbjct: 526 KFFSEMLDIGVKP-DHFTYATVLD 548
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 126/232 (54%), Gaps = 4/232 (1%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+++ ++ L E G + +Y S+L+ C +SL ++H +K+G D FV +
Sbjct: 420 YEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSST 479
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+V++Y KCG + EAQK+ D + +VSW S+ISG+ N Q E A F +ML+ G P
Sbjct: 480 VVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPD 539
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T T L C++L +I LGKQIH ++K + D + ++L +Y+ CG++ ++ F
Sbjct: 540 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 599
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ ++ + +SW +I +G+ + L F +M + PN T ++ C
Sbjct: 600 KAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRAC 651
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 47 LNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
LN SE + F E L + G K +Y ++L C N ++ + IH I+K
Sbjct: 517 LNKQSEEAQKF-FSEMLDI---GVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEML 572
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
D ++ + LV++Y KCGNM ++ +F+ +++ VSW ++I GY + Q A+ +F M
Sbjct: 573 GDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERM 632
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
+A P + T L ACS + + G + + +Y+ E + G
Sbjct: 633 QQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQL---EHFACMVDILGR 689
Query: 226 LNSAIKAFNRIR----EKNVMSWTTVIGAC 251
+A IR E + + W T++ C
Sbjct: 690 SKGPQEALKFIRSMPLEADAVIWKTLLSIC 719
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/680 (32%), Positives = 364/680 (53%), Gaps = 37/680 (5%)
Query: 97 HAHIVKTG---SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYV 151
HA +K G HQ F L+++Y + G + +AQ++F R +VV+W +++S V
Sbjct: 189 HAFALKNGLLHGHQRF-AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 247
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDT 210
Q+ + A+ DM+ G P VT +AL ACS LE + +G+++HAYV+K + ++
Sbjct: 248 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANS 307
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V ++L +Y+T + A + F+ + + K + W +I + G + LR F++M
Sbjct: 308 FVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARME 367
Query: 269 SE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+E G P E T+ S+ C + VH +K G A N V+N++M +Y + G
Sbjct: 368 AEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 427
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAG-----H-AQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
D A+++F + ++V+WN +I G H A LA++ +L
Sbjct: 428 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLARE--------------MQQLEE 473
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
G+ P+ T ++L C+ L A +G++IH ++ +DV VG+ALV+MY KCG +
Sbjct: 474 GGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLAL 533
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACS 500
+ VF + R I+W +I + H L +A LF+ M +G RPN+VTF+ ALAACS
Sbjct: 534 SRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACS 593
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-I 559
++GMV L F M++++ ++P D C++D+ R G ++EA+ + M+ +V
Sbjct: 594 HSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSA 653
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
WS + CR H N+ LG A E+LL+L+P++ Y +L +I+ +AG+W A V++ R
Sbjct: 654 WSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRR 713
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FE 676
+++ SWI + ++ F + HP S E+ ++ L + GY S +
Sbjct: 714 RGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHD 773
Query: 677 LTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
+ D + A+V HSEKLAIAFGLL + I V K+ +C DCH K ++ + REI+
Sbjct: 774 MDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIV 833
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
+RD +R H F NG C+C D+
Sbjct: 834 LRDVRRFHHFRNGQCSCGDY 853
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 287/639 (44%), Gaps = 94/639 (14%)
Query: 61 EALSVLTEGPKVQTSSYVSL---LQECVNRKSLSNAEIIHAHIVKTG--SHQDFFVMTFL 115
ALS +T Q + +L ++ + +A IHA ++ G V L
Sbjct: 41 RALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANAL 100
Query: 116 VNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+ Y +CG + A +VF ++ + VS+ SLIS + + A+ ML G+
Sbjct: 101 LTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPL 160
Query: 174 TNVTLGTALTACSSLE----SIRLGKQIHAYVVKYQT--EDDTSVGNSLCSLYSTCGSLN 227
T+ TL + L A S L ++RLG++ HA+ +K N+L S+Y+ G +
Sbjct: 161 TSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVA 220
Query: 228 SAIKAFNRIR--EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
A + F +V++W T++ ++G + ++ M++ G++P+ T S
Sbjct: 221 DAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPA 280
Query: 286 CGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNL 342
C + L VG ++H+ IK A+N V ++++ +Y V +A+++FD + S L
Sbjct: 281 CSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQL 340
Query: 343 VTWNAMIAGHAQM-MDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFSSILTICSR 400
WNAMI G+AQ MD EAL +F+++ + +G P T +S+L C+R
Sbjct: 341 GMWNAMICGYAQAGMD------------EEALRLFARMEAEAGFVPCETTMASVLPACAR 388
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
A E +H +K G + V AL++MY + G+ + A R+F + ++SW ++
Sbjct: 389 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 448
Query: 461 ITGFANHSLSHQALQLFEDMLL---AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
ITG A QL +M GV PN +T + L C A + A G K
Sbjct: 449 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC--AILAAPARG------K 500
Query: 518 E---YKIKPVMDHYM----CLIDMFVRLGCI---EEAFDFIKKM---------------- 551
E Y ++ +D + L+DM+ + GC+ FD + +
Sbjct: 501 EIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHG 560
Query: 552 ----------------DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCE 592
+ PNEV + +A C G ++ G F+A E+ ++P +
Sbjct: 561 LGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTP-D 619
Query: 593 SYAMLLDIFVSAGRWEDV-AVVKNL-TREEKLSETDDWS 629
A ++DI AGR ++ A+V ++ T E+++S WS
Sbjct: 620 ILACVVDILGRAGRLDEAYAMVTSMETGEQQVSA---WS 655
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++ S+L C ++ + E +H ++VK G + FV L+++Y + G + A+++F
Sbjct: 377 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 436
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDML---EAGNYPTNVTLGTALTACSSLESI 191
+ +VVSW +LI+G V A + +M E G P +TL T L C+ L +
Sbjct: 437 VDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAP 496
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK+IH Y V++ + D +VG++L +Y+ CG L + F+R+ +N ++W +I A
Sbjct: 497 ARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAY 556
Query: 252 GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYAS 309
G +G + F +M + G +PNE T + + C + G Q+ H++ G
Sbjct: 557 GMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEP 616
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMI 349
+ ++ + + G +DEA + M + W+ M+
Sbjct: 617 TPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTML 658
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/669 (31%), Positives = 359/669 (53%), Gaps = 28/669 (4%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+HA V G D FV + L +Y ++ A+KVFD +P + V W +L++G + S+
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAG-LSGSE 194
Query: 156 PELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
A+ F M+ G+ P TL + L A + + + +G+ +H++ K + V
Sbjct: 195 ---AVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLT 251
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
L SLYS CG + SA F+ + + +++++ +I NG + F+++++ G+ P
Sbjct: 252 GLISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWP 311
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N TL ++ V + +H +K G+ +N V +I L+ + ++ A+K F
Sbjct: 312 NSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAF 371
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSS 393
D M + +WNAMI+G+AQ NG TE A+++F ++ ++P+ T SS
Sbjct: 372 DTMPEKTMESWNAMISGYAQ------------NGLTEMAVALFEQMVKLNVRPNPITISS 419
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
L+ C++L AL G+ +H + + +V V TAL++MY KCG I A R+F M +
Sbjct: 420 TLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKN 479
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SW +MI G+ H +AL+L++DML A + P TF+ L ACS+ G+V E F
Sbjct: 480 VVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFR 539
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV---IWSVFIAGCRRH 570
M +Y I P ++H C++D+ R G ++EAF+ I +F + V +W + C H
Sbjct: 540 SMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFELIS--EFPKSAVGPGVWGALLGACMVH 597
Query: 571 GNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSW 630
+ +L A+++L +L P++ Y +L ++ S ++ + AVV+ + KL +T ++
Sbjct: 598 KDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTL 657
Query: 631 IRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASV 685
I I +K + F D HPQS I+ L++L K GY+ + L D +E
Sbjct: 658 IEIGNKPHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVK 717
Query: 686 YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLAIAFGLL+T + I ++K+ +C DCHN K I+ +T R I+VRD+ R H F
Sbjct: 718 VHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFR 777
Query: 746 NGHCTCRDF 754
+G C+C D+
Sbjct: 778 DGVCSCGDY 786
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 195/379 (51%), Gaps = 12/379 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ ++ S+L ++ +H+ K G + V+T L+++Y KCG++E A+
Sbjct: 209 RPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARC 268
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD + + ++V++ +LISGY N ++++F +++ G +P + TL + S
Sbjct: 269 LFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGH 328
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
L + +H +V+K ++ V ++ +L+ + SA KAF+ + EK + SW +I
Sbjct: 329 DLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISG 388
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG + F +M+ ++PN T++S S C + +L +G +H + + N
Sbjct: 389 YAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPN 448
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +++ +Y KCG + EA+++F+ M + N+V+WNAMIAG+ H G
Sbjct: 449 VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYG-----------LHGQGA 497
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTAL 429
EAL ++ + + + P TF S+L CS +E+G ++ ++T + T +
Sbjct: 498 EALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCM 557
Query: 430 VNMYKKCGRIERASRVFVE 448
V++ + G+++ A + E
Sbjct: 558 VDLLGRAGQLKEAFELISE 576
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/675 (31%), Positives = 360/675 (53%), Gaps = 52/675 (7%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
L + +IHA ++KTG H + ++ L+ + + A VF+ + N++ W ++
Sbjct: 3 LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
G+ +S P A+ +++ M+ G P + T L +C+ ++ + G+QIH +V+K
Sbjct: 63 FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122
Query: 207 EDDTSVGNSLCSLY-------------------------------STCGSLNSAIKAFNR 235
+ D V SL S+Y ++ G + +A K F+
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDE 182
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
I K+V+SW +I E G + L F M+ ++P+E T+ ++ S C S+ +G
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 242
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
QVHS G+ SNL++ N+++ LY KCG ++ A LF+G+ + ++++WN +I G+ M
Sbjct: 243 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHM 302
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
N EAL +F ++ SG P+ T SIL C+ L A++ G IH
Sbjct: 303 -----------NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 351
Query: 416 K--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
K G + + T+L++MY KCG IE A +VF + ++L SW +MI GFA H + +
Sbjct: 352 KRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 411
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
+F M G+ P+ +TFVG L+ACS++GM+ F M ++YK+ P ++HY C+ID
Sbjct: 412 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMID 471
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ G +EA + I M+ EP+ VIW + C+ HGN+ELG A+ L+K++P++ S
Sbjct: 472 LLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGS 531
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y +L +I+ +AGRW +VA + L ++ + + S I I V+ F D HP++ EI
Sbjct: 532 YVLLSNIYATAGRWNEVANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREI 591
Query: 654 FKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILV 708
+ +L+E+ + G+ S L + +E A +HSEKLAIAFGL++T + + +
Sbjct: 592 YGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTI 651
Query: 709 VKSTTMCRDCHNFIK 723
VK+ +CR+CH K
Sbjct: 652 VKNLRVCRNCHEAYK 666
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 46/394 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
+S+PV +L + L P T + LL+ C K+ + IH H++K G D
Sbjct: 69 SSDPVSALKLYVCMISLGLLPNSYTFPF--LLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 126
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS-----GYVQNSQPEL------ 158
+V T L+++Y + G +E+A KVFD P +VVS+T+LI GY++N+Q
Sbjct: 127 YVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVK 186
Query: 159 --------------------AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
A+ +F DM++ P T+ T ++AC+ SI LG+Q+H
Sbjct: 187 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 246
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+++ + + + N+L LYS CG L +A F + K+V+SW T+IG
Sbjct: 247 SWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYK 306
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL--GYASNLRVRNS 316
+ L F +ML G PN+ T+ SI C + ++ +G +H K G A+ +R S
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KCG ++ A ++F+ + H +L +WNAMI G A H + IF
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM-----------HGRADASFDIF 415
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
S++ +G++PD TF +L+ CS L+ G I
Sbjct: 416 SRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 449
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 144/286 (50%), Gaps = 7/286 (2%)
Query: 59 FQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + + K S+ V+++ C S+ +H+ I G + ++
Sbjct: 204 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNA 263
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG +E A +F+ LP +V+SW +LI GY + + A+ +F +ML +G P
Sbjct: 264 LIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 323
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKY--QTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
+VT+ + L AC+ L +I +G+ IH Y+ K + +S+ SL +Y+ CG + +A +
Sbjct: 324 DVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQV 383
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
FN I K++ SW +I +G A FS+M GI+P++ T + S C L
Sbjct: 384 FNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGML 443
Query: 293 RVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+G + S+ L ++ L GL EA+++ + M
Sbjct: 444 DLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 489
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/625 (32%), Positives = 329/625 (52%), Gaps = 58/625 (9%)
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC--GSLNSAIKAFNRIREKNVMSW 244
S+ S++ Q+HA V++ D V +L Y+ + + A+K F+ I NV W
Sbjct: 42 SITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
VI C EN + + + F+ +M+ + +PN+FT ++ C +++ G Q+H +K
Sbjct: 102 NIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK 160
Query: 305 LGYASNLRVR------------------------------NSIMYLYLKCGLVDEAQKLF 334
G S++ ++ N+++ YLKCG+++ A+ LF
Sbjct: 161 HGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLA-----------KDDLS---------AHNGGTEALS 374
M N+ +WN MI G A+ +L +D++S + EAL
Sbjct: 221 AQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALE 280
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF ++ +P + SS+L CS + A++QG +HA + D V+GTAL++MY
Sbjct: 281 IFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYA 340
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCGR++ VF EM R + +W +MI G A H + AL+LF + ++PN +T VG
Sbjct: 341 KCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVG 400
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC++AG V + L F+ M++ Y + P ++HY C++D+ R G EA D I M +
Sbjct: 401 VLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK 460
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN +W + CR HGN +L + LL+L+P++ Y +L +I+ GR++DV+ ++
Sbjct: 461 PNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIR 520
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
L + + S + + V+ FK DG HPQ EI++ L + E+ + G+ S
Sbjct: 521 KLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTS 580
Query: 675 ---FELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F++ +E E+A YHSEKLAIAFGL+NT I +VK+ +C DCH+ K+I+ +
Sbjct: 581 QVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIF 640
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD R H F NG C+C+DF
Sbjct: 641 DREIIVRDRVRYHHFKNGTCSCKDF 665
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 161/378 (42%), Gaps = 75/378 (19%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKC--GNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
+HA ++++G QD +V L+ Y N + A KVF ++P NV W +I G ++N
Sbjct: 52 LHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK---------- 203
++ AI+ + M+ P T T ACS ++++ G+QIH +VVK
Sbjct: 112 NKLFKAIYFYGRMVIDAR-PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIK 170
Query: 204 --------------------YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
Y E D N++ Y CG L +A F ++ KN+ S
Sbjct: 171 SAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGS 230
Query: 244 WTTVIG--ACGEN-----------------------------GEAVQGLRFFSKMLSEGI 272
W +I A G N G + L F +M E
Sbjct: 231 WNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+P F L+S+ + C + ++ G VH+ + + + +++ +Y KCG +D +
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+F+ M + TWNAMI G L+ H +AL +FSKL MKP+ T
Sbjct: 351 VFEEMKEREIFTWNAMIGG-----------LAIHGRAEDALELFSKLQEGRMKPNGITLV 399
Query: 393 SILTICSRLVALEQGEQI 410
+LT C+ +++G +I
Sbjct: 400 GVLTACAHAGFVDKGLRI 417
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 2/238 (0%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++N K GN+ +A+K+FD + + +SW+S++ GY+ + + A+ +F M P
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L + L ACS++ +I G+ +HAY+ + + D +G +L +Y+ CG L+ + F
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++E+ + +W +IG +G A L FSK+ ++PN TL + + C +
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413
Query: 295 GAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
G ++ ++ G L ++ L + GL EA+ L + M N W A++
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 59 FQEALSVLTEGPKVQTSS----YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + + + +T S+L C N ++ +HA++ + D + T
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG ++ +VF+ + + +W ++I G + + E A+ +F + E P
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+TL LTAC+ + G +I + + Y + + + L G + A
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 234 NRIREK-NVMSWTTVIGACGENG 255
N + K N W ++GAC +G
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHG 477
>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
gi|219885099|gb|ACL52924.1| unknown [Zea mays]
Length = 530
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 178/541 (32%), Positives = 305/541 (56%), Gaps = 17/541 (3%)
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y CG+++ A F+++ ++V+SWT +I +N + + ML +PN FT
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
TS+ G +G Q+H+L +K + ++ V ++++ +Y +C +D A +FD +
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
N V+WNA+IAG A+ D G L F+++ +G +T+SS+ +
Sbjct: 121 SKNEVSWNALIAGFARKAD-----------GETTLMKFAEMQRNGFGATHFTYSSMFSAF 169
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+R+ ALEQG +HA +K+G VG ++ MY K G + A +VF M R L++W
Sbjct: 170 ARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWN 229
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
+M+T A + L +A+ FE++ G++ NQ+TF+ L ACS+ G+V E YF+MM K+
Sbjct: 230 TMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMM-KD 288
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
Y ++P +DHY+ +D+ R G ++EA F+ KM EP +W + CR H N ++G Y
Sbjct: 289 YNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQY 348
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AA+ + +L P D +L +I+ S G+W D A V+ + + + + SW++I++ V+
Sbjct: 349 AADHVFELDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVH 408
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL-----TDEESASVYHSEKLAI 693
F +D HP+S +I+++ +E+ + K GY + L + E+ YHSEK+A+
Sbjct: 409 MFVADDDTHPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIAL 468
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
AF L+N P + I ++K+ +C DCH+ K ++ + REI+VRD+ R H F G C+C D
Sbjct: 469 AFALINMPAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGD 528
Query: 754 F 754
+
Sbjct: 529 Y 529
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 167/325 (51%), Gaps = 11/325 (3%)
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG + +A+ VFD +P +VVSWT LI+GY QN P AI + DML A P T
Sbjct: 1 MYCKCGAVSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFT 60
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ L A + +G+Q+HA VKY ++D VG++L +Y+ C ++ AI F+R+
Sbjct: 61 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 120
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
KN +SW +I + L F++M G FT +S+ S + +L G
Sbjct: 121 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 180
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
VH+ IK G V N+++ +Y K G + +A+K+FD M +LVTWN M+ AQ
Sbjct: 181 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQ--- 237
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
+ G EA++ F ++ G++ + TF S+LT CS +++G+ +
Sbjct: 238 --------YGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDY 289
Query: 418 GFLSDVVVGTALVNMYKKCGRIERA 442
++ + V++ + G ++ A
Sbjct: 290 NVQPEIDHYVSFVDLLGRAGLLKEA 314
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 115/211 (54%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ SLL+ S E +HA VK +D +V + L+++Y +C M+ A VFD L
Sbjct: 60 TFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRL 119
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
N VSW +LI+G+ + + E + F +M G T+ T + +A + + ++ G+
Sbjct: 120 VSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGR 179
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+HA+++K + VGN++ +Y+ GS+ A K F+R+ ++++++W T++ A + G
Sbjct: 180 WVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYG 239
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ + F ++ GIQ N+ T S+ + C
Sbjct: 240 LGKEAVAHFEEIRKCGIQLNQITFLSVLTAC 270
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 1/186 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y S+ +L +HAH++K+G FV ++ +Y K G+M +A+KVFD +
Sbjct: 161 TYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRM 220
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ ++V+W ++++ Q + A+ F ++ + G +T + LTACS ++ GK
Sbjct: 221 DKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGK 280
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA-IKAFNRIREKNVMSWTTVIGACGEN 254
+ Y + + S L G L A I F E W ++GAC +
Sbjct: 281 HYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340
Query: 255 GEAVQG 260
A G
Sbjct: 341 KNAKMG 346
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/654 (32%), Positives = 353/654 (53%), Gaps = 18/654 (2%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTS 145
++ +A IH+ ++ T F+ L+N+Y KCG++++ +F + P NVVSWTS
Sbjct: 41 RTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTS 100
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
LI+ + +P A+ F M +G YP + T L+AC+ + G+Q+H+ V K+
Sbjct: 101 LITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHG 160
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ V ++L +Y+ C + A K F + +N++SW T+I +N Q + FF
Sbjct: 161 FLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFK 220
Query: 266 KMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+L E + +E + +S+ S C +L G QVH + +KLG + + + NS+ +Y KC
Sbjct: 221 TLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKC 280
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGM 384
GL ++ KLF ++VTWN MI + + HN +A + F + G
Sbjct: 281 GLFNDVAKLFSNTGARDVVTWNIMIMAY----------VYNHNY-EDACNSFWMMRRKGS 329
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD ++SS+L C+ L AL QG IH +++GF+ ++ V ++L+ MY KCG + A +
Sbjct: 330 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQ 389
Query: 445 VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM 504
+F E R ++ WT++I H ++ ++LFE ML G++P+ +TFV L+ACS+ G
Sbjct: 390 IFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSHTGR 449
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
V E YF M K + I P +HY C++D+ R G ++ A FI+ M +P+ +W +
Sbjct: 450 VEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIELMPIKPDASVWGALL 509
Query: 565 AGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSE 624
+ CR H N+ +G A +L L+P + +Y +L +I G + V+ + +
Sbjct: 510 SACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVRK 569
Query: 625 TDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD----E 680
SWI IK+ Y F +D H ++ EI+++L++L E K GY + F + +
Sbjct: 570 EPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKLKELVKKKGYVAETEFAINTAEEYK 629
Query: 681 ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
E + YHSEK+A+AFGLL+ P +PI + K+ C DCH +K + + AREII
Sbjct: 630 EQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCGDCHTVMKFASEIFAREII 683
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 219/456 (48%), Gaps = 23/456 (5%)
Query: 30 DKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKS 89
D + VS+ S + QL P ++L F + P T S V L C + +
Sbjct: 91 DSKNVVSWT---SLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAV--LSACTDTTA 145
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
+ E +H+ + K G + FV++ LV++Y KC +M A+KVF+ +P N+VSW ++I G
Sbjct: 146 SVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTMIVG 205
Query: 150 YVQNSQPELAIHVFLD-MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
++QN + AI F +LE V+ + +AC++ ++ GKQ+H +K +
Sbjct: 206 FLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWN 265
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+ NSL +Y CG N K F+ ++V++W +I A N F M
Sbjct: 266 LVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMR 325
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
+G P+E + +S+ C + +L G +H+ I+ G+ NLRV +S++ +Y KCG +
Sbjct: 326 RKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLV 385
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
+A ++F+ N+V W A+IA Q H + +F ++ G+KPD
Sbjct: 386 DAFQIFEETEDRNVVCWTAIIAACQQ-----------HGHANWVVELFEQMLREGIKPDY 434
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFV 447
TF S+L+ CS +E+G +K G +V++ + G ++RA R
Sbjct: 435 ITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGELDRAKRFIE 494
Query: 448 EMSTRTLIS-WTSMITGFANHSL----SHQALQLFE 478
M + S W ++++ NHS AL+LF+
Sbjct: 495 LMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFD 530
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 128/233 (54%), Gaps = 14/233 (6%)
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P LTS++S+ + + Q+HS I S + N+++ LY KCG VD+ L
Sbjct: 25 PFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLLL 84
Query: 334 FDGMSH--VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
F N+V+W ++I L+ +AL+ F+ + SG+ P+ YTF
Sbjct: 85 FSSAPDDSKNVVSWTSLIT-----------QLTRFKRPFKALTFFNHMRRSGVYPNHYTF 133
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S++L+ C+ A GEQ+H+L K GFL++V V +ALV+MY KC + A +VF EM
Sbjct: 134 SAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPV 193
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP-NQVTFVGALAACSNAG 503
R L+SW +MI GF + L QA+ F+ +LL + ++V+F +AC+NAG
Sbjct: 194 RNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAG 246
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G +SY S+L C N +L +IH I+++G ++ V + L+ +Y KCG++ +
Sbjct: 327 KGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVD 386
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A ++F+ NVV WT++I+ Q+ + +F ML G P +T + L+ACS
Sbjct: 387 AFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSH 446
Query: 188 LESIRLGKQIHAYVVK----YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+ G ++K Y + + + L S G L+ A + + K S
Sbjct: 447 TGRVEEGFFYFNSMIKVHGIYPGHEHYAC---IVDLLSRAGELDRAKRFIELMPIKPDAS 503
Query: 244 -WTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTL 279
W ++ AC + + G K+ E P + L
Sbjct: 504 VWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 541
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 40/229 (17%)
Query: 386 PDLYTFSSI--LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
P L+ +S+ L CSR + QIH+ + T LS + L+N+Y KCG +++
Sbjct: 25 PFLHPLTSLNSLLNCSR--TSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTL 82
Query: 444 RVFVEM--STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+F ++ ++SWTS+IT +AL F M +GV PN TF L+AC++
Sbjct: 83 LLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTD 142
Query: 502 AGMVYEALGYFEMMQKE------YKIKPVMDHYMCLIDM--------------------- 534
++ K + + ++D Y DM
Sbjct: 143 TTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAEKVFEEMPVRNLVSWNTM 202
Query: 535 ---FVRLGCIEEAFDFIKKMDFEP----NEVIWSVFIAGCRRHGNMELG 576
F++ ++A F K + E +EV +S + C GN+E G
Sbjct: 203 IVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFG 251
>gi|357139595|ref|XP_003571366.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Brachypodium distachyon]
Length = 674
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/594 (32%), Positives = 325/594 (54%), Gaps = 23/594 (3%)
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
L G Y VT +AL S ++ + + + D + N + +Y CG L
Sbjct: 97 LPPGTYDALVTAASALREAGSAAAVLWHMESSGF------QPDQYMWNRVLGMYLACGML 150
Query: 227 NSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSV 285
A + F + ++ ++W ++G + + L F ++ E G+ L
Sbjct: 151 AEAREVFEGMPARSRVTWGVMMGGLVDGRQPRGALALFGELWGEMGVGAGPRVLVVAVRA 210
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
+ S+R G ++H K+G + + +++ +Y KCG +DEA+++FDGM ++V W
Sbjct: 211 ATALGSVRAGQELHCCVAKMGACEDQYLPCALVDMYSKCGRLDEARRVFDGMPWRSVVAW 270
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
N M+A + S H EA+ ++ + G+ D +TFS++L + SRL LE
Sbjct: 271 NTMLAAY-----------SLHGCAEEAVDLYHDMCECGVVFDQFTFSTMLGVFSRLGLLE 319
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+QIHA +++G D+V TALV++Y K GR+E A VF M +R LISW ++I G+
Sbjct: 320 HAKQIHASLIQSGLHMDIVGNTALVDLYCKWGRMEDARHVFERMPSRNLISWNALIAGYG 379
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H + A+++FE ++ G+ PN VT++G L AC +G + + F++M + K KP
Sbjct: 380 YHGMGAHAIEMFERLIAEGIAPNHVTYLGVLNACRFSGFIDKGKRIFQLMAQNPKTKPRA 439
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY C+I++F + G ++EA+ I+K F P +W + CR H N++L AAEQLL
Sbjct: 440 MHYACVIELFGQQGLLDEAYSMIRKAPFTPTANMWGALLTACRIHKNIQLARLAAEQLLA 499
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
++P+ +Y +LL++++S+GR ++ V N L ++ SWI +K K + F D
Sbjct: 500 MEPQKVNNYIVLLNLYISSGRQDEALKVVNTLNGAGLCMSNACSWITVKKKDHRFFFKDS 559
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNT 700
LHP+S+EI++ L L+E K GY +E L D +++ YHSE+LA+AFG+++T
Sbjct: 560 LHPKSSEIYRKLHTLMEALKELGYVAEEDELLPDILPDELKTSKAYHSERLAVAFGIIST 619
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+P+ + +S +CRDCH +K++ +T REI++RD R H F G C+C D+
Sbjct: 620 SPSTPLTINQSHRLCRDCHKVMKLVAQVTKREIVLRDGSRFHHFKLGTCSCGDY 673
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 211/422 (50%), Gaps = 16/422 (3%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +Y +L+ + +A + H+ +G D ++ ++ +Y CG + EA++V
Sbjct: 97 LPPGTYDALVTAASALREAGSAAAVLWHMESSGFQPDQYMWNRVLGMYLACGMLAEAREV 156
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLES 190
F+ +P + V+W ++ G V QP A+ +F ++ E G L A+ A ++L S
Sbjct: 157 FEGMPARSRVTWGVMMGGLVDGRQPRGALALFGELWGEMGVGAGPRVLVVAVRAATALGS 216
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+R G+++H V K +D + +L +YS CG L+ A + F+ + ++V++W T++ A
Sbjct: 217 VRAGQELHCCVAKMGACEDQYLPCALVDMYSKCGRLDEARRVFDGMPWRSVVAWNTMLAA 276
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+G A + + + M G+ ++FT +++ V + L Q+H+ I+ G +
Sbjct: 277 YSLHGCAEEAVDLYHDMCECGVVFDQFTFSTMLGVFSRLGLLEHAKQIHASLIQSGLHMD 336
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ +++ LY K G +++A+ +F+ M NL++WNA+IAG+ H G
Sbjct: 337 IVGNTALVDLYCKWGRMEDARHVFERMPSRNLISWNALIAGYGY-----------HGMGA 385
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-L 429
A+ +F +L + G+ P+ T+ +L C +++G++I L + + A +
Sbjct: 386 HAIEMFERLIAEGIAPNHVTYLGVLNACRFSGFIDKGKRIFQLMAQNPKTKPRAMHYACV 445
Query: 430 VNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
+ ++ + G ++ A + + T T W +++T H + Q +L + LLA + P
Sbjct: 446 IELFGQQGLLDEAYSMIRKAPFTPTANMWGALLTACRIHK-NIQLARLAAEQLLA-MEPQ 503
Query: 489 QV 490
+V
Sbjct: 504 KV 505
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/696 (31%), Positives = 357/696 (51%), Gaps = 35/696 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
Y LLQ C SL+ ++IH+ + G H F+ ++ +Y K G++ A+ +FD+
Sbjct: 28 YDHLLQCCT---SLTTLKLIHSSLSTRGFLLHTPHFLARLII-LYSKLGDLHSARTLFDH 83
Query: 135 LPRI--------NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
N +++ Y + AI +++ M G N T L C+
Sbjct: 84 RHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCA 143
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
S G+ +H VV+ D V +L +Y+ CG + A + F+R+ ++V+ WT
Sbjct: 144 SELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTA 203
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I + ++ L F KM EG +E T S++S G + R+ VH + G
Sbjct: 204 MITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNG 263
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ ++ V NSI+ +Y KCG V+ A+ +FD M N ++WN+M++G+ Q
Sbjct: 264 FIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQ------------ 311
Query: 367 NG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG T+ALS+F+++ +S P+ T +++ CS L + G ++H + + D +
Sbjct: 312 NGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTL 371
Query: 426 GTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
A+++MY KCG ++ A +F E+ R + SW +I+G+ H +AL+LF M +
Sbjct: 372 RNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVE 431
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GV PN +TF L+ACS+AG++ E F M K ++P M HY C++DM R G + E
Sbjct: 432 GVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDMLGRAGFLNE 490
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
AF IKK+ P++ +W + CR HGN ELG AA L +L+P+ Y ++ +I+ +
Sbjct: 491 AFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAA 550
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
+ +W++V +V+ + L + +S I +V+ F D P E+++ ++ L +
Sbjct: 551 SNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIE 610
Query: 664 AKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
K GY S E D+E YHSEKLA+AFG++ PI V K+ +C DC
Sbjct: 611 MKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQGMPIQVTKNLRVCSDC 670
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K I+S+ R+IIVRD R H F G C+C D+
Sbjct: 671 HWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDY 706
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 199/386 (51%), Gaps = 13/386 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V +Y +L+ C + E++H +V+TG D FV LV++Y KCG + +A
Sbjct: 127 GVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDA 186
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+VFD + +VV WT++I+ Y Q +P A+ +F M E G +T + +A L
Sbjct: 187 HEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQL 246
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
R+ +H Y V D SVGNS+ +Y+ CG++ A F+R+ E+N +SW +++
Sbjct: 247 GDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSML 306
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG L F++M + PN T + S C + S +G ++H+ I
Sbjct: 307 SGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMD 366
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ +RN+IM +Y+KCG +D A ++F+ + ++ +WN +I+G+ H
Sbjct: 367 IDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYG-----------VH 415
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G EAL +FS++ G++P+ TF+SIL+ CS +++G + A K ++
Sbjct: 416 GHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHY 475
Query: 427 TALVNMYKKCGRIERASRVFVEMSTR 452
+V+M + G + A R+ ++ +R
Sbjct: 476 ACMVDMLGRAGFLNEAFRLIKKIPSR 501
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/619 (33%), Positives = 330/619 (53%), Gaps = 48/619 (7%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P+ T + AC ++ LG+++HA+ + N L +Y+ CGSL A
Sbjct: 85 PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI--------------QP---- 274
F+ + +++ SW T+I + G Q + F +M QP
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREAL 204
Query: 275 --------------NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
N+FTL+S + + LR+G ++H I+ + V ++++ L
Sbjct: 205 ELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDL 264
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KCG +DEA+ +FD M ++V+W MI H D ++ E +F L
Sbjct: 265 YGKCGSLDEARGIFDQMKDRDVVSWTTMI--HRCFEDGRRE---------EGFLLFRDLM 313
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
SG++P+ YTF+ +L C+ A G+++H + G+ +ALV+MY KCG
Sbjct: 314 QSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTR 373
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A RVF EM L+SWTS+I G+A + +AL FE +L +G +P+QVT+VG L+AC+
Sbjct: 374 VARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACT 433
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+AG+V + L YF +++++ + DHY C+ID+ R G +EA + I M +P++ +W
Sbjct: 434 HAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLW 493
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ + GCR HGN+EL AA+ L +++P++ +Y L +I+ +AG W +VA V+
Sbjct: 494 ASLLGGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNM 553
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD- 679
+ + SWI IK +V+ F D HP++++I + L EL +K K GY +F L D
Sbjct: 554 GIVKKPGKSWIEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDV 613
Query: 680 ----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIV 735
+E VYHSEKLA+ FG+++TP +PI V K+ C DCH IK I+ + R+I V
Sbjct: 614 EEEQKEQNLVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITV 673
Query: 736 RDSKRLHKFVNGHCTCRDF 754
RDS R H F +G C+C+D+
Sbjct: 674 RDSNRFHCFEDGSCSCKDY 692
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 246/503 (48%), Gaps = 72/503 (14%)
Query: 59 FQEALSVLTEGPKVQTSS--------------YVSLLQECVNRKSLSNAEIIHAHIVKTG 104
F+EA+ VL + +V+ + Y +L+ CV ++L +HAH +
Sbjct: 58 FEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASN 117
Query: 105 SHQDFFVMTFLVNVYGKCGN-------------------------------MEEAQKVFD 133
F+ L+++Y KCG+ +E+A+K+FD
Sbjct: 118 FVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFD 177
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIR 192
+P+ + SW + ISGYV ++QP A+ +F M +N TL +AL A +++ +R
Sbjct: 178 EMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLR 237
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LGK+IH Y+++ + D V ++L LY CGSL+ A F+++++++V+SWTT+I C
Sbjct: 238 LGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCF 297
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
E+G +G F ++ G++PNE+T + + C + +G +VH + GY
Sbjct: 298 EDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSF 357
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
++++++Y KCG A+++F+ M +LV+W ++I G+AQ NG E
Sbjct: 358 AISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQ------------NGQPDE 405
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALV 430
AL F L SG KPD T+ +L+ C+ +++G E H++ K G + ++
Sbjct: 406 ALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVI 465
Query: 431 NMYKKCGRIERASRVFVEMSTRT-LISWTSMITG---FANHSLSHQALQ-LFEDMLLAGV 485
++ + GR + A + M + W S++ G N L+ +A + L+E +
Sbjct: 466 DLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYE------I 519
Query: 486 RP-NQVTFVGALAACSNAGMVYE 507
P N T++ +NAG+ E
Sbjct: 520 EPENPATYITLANIYANAGLWSE 542
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 2/203 (0%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
R GF ++ G + ++ +L C + + + +H +++ G F ++
Sbjct: 302 REEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISA 361
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KCGN A++VF+ + + ++VSWTSLI GY QN QP+ A+H F +L++G P
Sbjct: 362 LVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPD 421
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
VT L+AC+ + G + H+ K+ + L + G A
Sbjct: 422 QVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENII 481
Query: 234 NRIREK-NVMSWTTVIGACGENG 255
+ + K + W +++G C +G
Sbjct: 482 DNMPVKPDKFLWASLLGGCRIHG 504
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 56/274 (20%)
Query: 360 KDDLSAHNGGTEALSIFSK----------LNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
KD +S N EA+ + + L+ + +P +S+++ C R ALE G +
Sbjct: 49 KDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELGRR 108
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+HA T + F+ V + L++MY KCG + A +F EM R L SW +MI G+A
Sbjct: 109 VHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGR 168
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE----------- 518
QA +LF++M + + ++ A++ EAL F +MQ+
Sbjct: 169 LEQARKLFDEM----PQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLS 224
Query: 519 --------------------YKIKPVMDH----YMCLIDMFVRLGCIEEA---FDFIKKM 551
Y I+ ++ + L+D++ + G ++EA FD +K
Sbjct: 225 SALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDR 284
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
D V W+ I C G E GF L++
Sbjct: 285 DV----VSWTTMIHRCFEDGRREEGFLLFRDLMQ 314
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/600 (32%), Positives = 324/600 (54%), Gaps = 13/600 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + ++ S+L C + +H ++ G H D V LV +Y K G + +A K
Sbjct: 70 KPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALK 129
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F+ +P NVV+W +I+G+VQN + A +F +M+ AG P ++T + L + + S
Sbjct: 130 LFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESAS 189
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ GK+IH Y++++ D + ++L +Y C + A K F + +++ T +I
Sbjct: 190 LKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISG 249
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
NG L F +L E + PN TL S+ C + +L +G ++H+ +K G
Sbjct: 250 YVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDER 309
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V ++IM +Y KCG +D A ++F M + V WNA+I +Q NG
Sbjct: 310 RHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQ------------NGKP 357
Query: 371 -EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+ +F ++ G+ D + S+ L+ C+ L AL G+ IH+ +K F S+V +AL
Sbjct: 358 QEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESAL 417
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG + A VF M + +SW S+I + +H +L LF ML G++P+
Sbjct: 418 IDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDH 477
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VTF+ L+AC +AG V + + YF M +EY I M+HY C++D+F R G + EAF+ IK
Sbjct: 478 VTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIK 537
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M F P++ +W + CR HGN+EL A+ LL L P++ Y +L ++ AG+W
Sbjct: 538 NMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGS 597
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V +++L ++ + + +SWI + + F DG HP+SA+I+ VL+ L+ + + GY
Sbjct: 598 VRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGY 657
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 254/489 (51%), Gaps = 27/489 (5%)
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF 163
G + D FV + L+ +Y + G +E+A+++FD +P + V W +++G+V+ +P A+ VF
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
DM P ++T + L+ C+S G Q+H V+ D V N+L ++YS
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
G L+ A+K FN + + NV++W +I +NG + FS+M+S G+ P+ T S
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
SL+ G ++H ++ G A ++ ++++++ +Y KC V A K+F ++V++V
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVA 403
A+I+G+ L+ N +AL IF L M P+ T +S+L C+ L
Sbjct: 242 VCTAIISGYV---------LNGLN--NDALEIFRWLLEEKMSPNAVTLASVLPACAGLAT 290
Query: 404 LEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
L G+++HA LK G VG+A+++MY KCGR++ A ++F M + + W ++IT
Sbjct: 291 LNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITN 350
Query: 464 FANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKP 523
+ + +A+ LF M G+ + V+ AL+AC+N ++ M IK
Sbjct: 351 CSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFM-----IKG 405
Query: 524 VMDHYM----CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
D + LIDM+ + G + A FD ++ E NEV W+ IA HG++E+
Sbjct: 406 AFDSEVFAESALIDMYGKCGNLSVARCVFDMMR----EKNEVSWNSIIAAYGSHGHLEVS 461
Query: 577 FYAAEQLLK 585
++L+
Sbjct: 462 LALFHKMLE 470
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 231/442 (52%), Gaps = 21/442 (4%)
Query: 5 PWAAAAACTLETKSRQPSSSLA---TLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQE 61
P A A + +K Q S +L T+ D N V++ + +Q NG + SL F E
Sbjct: 108 PLVANALVAMYSKFGQLSDALKLFNTMPDTN-VVTWNGMIAGFVQ-NGFMDEA-SLLFSE 164
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
+S G + ++ S L SL + IH +I++ G D F+ + L+++Y K
Sbjct: 165 MISA---GVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFK 221
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
C ++ A K+F +++V T++ISGYV N A+ +F +LE P VTL +
Sbjct: 222 CRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASV 281
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC+ L ++ LGK++HA ++K+ ++ VG+++ +Y+ CG L+ A + F R+ EK+
Sbjct: 282 LPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDA 341
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ W +I C +NG+ + + F +M EG+ + ++++ S C + +L G +HS
Sbjct: 342 VCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSF 401
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK + S + ++++ +Y KCG + A+ +FD M N V+WN++IA +
Sbjct: 402 MIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYG-------- 453
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFL 420
+H +L++F K+ G++PD TF +IL+ C +++G Q +T + G
Sbjct: 454 ---SHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIP 510
Query: 421 SDVVVGTALVNMYKKCGRIERA 442
+ + +V+++ + GR+ A
Sbjct: 511 ARMEHYACIVDLFGRAGRLNEA 532
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 11/194 (5%)
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+G+ + V +S++ LY + G +++A++LFD M + + V WN M+ G + +
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGE------- 53
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
A+ +F + + KP+ TF+S+L+IC+ E G Q+H L + GF D +
Sbjct: 54 ----PNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPL 109
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V ALV MY K G++ A ++F M +++W MI GF + +A LF +M+ AG
Sbjct: 110 VANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAG 169
Query: 485 VRPNQVTFVGALAA 498
V P+ +TF L +
Sbjct: 170 VSPDSITFASFLPS 183
>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/569 (33%), Positives = 307/569 (53%), Gaps = 20/569 (3%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E +H+ V+ G D ++ + L+ +Y +CG++ A++VF + +VV +TSL+S +N
Sbjct: 156 EQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRN 215
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
+ A+ V M G P T+ + L C +G+QIH Y++K
Sbjct: 216 GELARAVDVLCQMTRQGLQPNEHTMTSMLAECPR----GIGEQIHGYMLKVMGSQSVYAS 271
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+L YS G +A F + KNV+SW +++ C +G LR FS+M+SEG+Q
Sbjct: 272 TALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQ 331
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PNEF + S CG S+ +G Q+H IK +++RV N+++ +Y + G V E + +
Sbjct: 332 PNEFAFSIALSACG---SVCLGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAV 388
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFS 392
+ + +LV+W A I+ + Q NG +E A+++ +++S G P+ Y FS
Sbjct: 389 LGKIENPDLVSWTAAISANFQ------------NGFSEKAVALLLQMHSEGFTPNDYAFS 436
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S L+ C+ L L QG Q+H L LK G V G AL+NMY KCGRI A F M T
Sbjct: 437 SGLSSCADLALLHQGRQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTH 496
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++SW S+I G A H ++ AL+ F +M + RP+ TF+ L C++AG+V E +F
Sbjct: 497 DVMSWNSLIHGLAQHGDANLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFF 556
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M Y + P HY C+IDM R G EA I+ M FEP+ +IW +A C+ H N
Sbjct: 557 RQMTDRYGLTPTPSHYACMIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRN 616
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+++G AA++L++L +D SY ++ +++ W D V+ E + + WSWI
Sbjct: 617 LDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIE 676
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+K++V +F D HP S I+++L EL+
Sbjct: 677 VKNEVNTFVAGDMSHPDSTSIYQMLAELL 705
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/464 (29%), Positives = 238/464 (51%), Gaps = 34/464 (7%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
K G + +A +FD +PR NVV+WT+ ISG +N +PE A +F DMLE+G P +
Sbjct: 82 KSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNA 141
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
AL AC++ ++ LG+Q+H+ V+ D +G+ L LYS CGSL +A + F R+ +
Sbjct: 142 ALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPD 201
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+ +T+++ A NGE + + +M +G+QPNE T+TS+ + C +G Q+H
Sbjct: 202 VVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGEQIHG 257
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+K+ + ++ +++ Y + G A+ +F+ + N+V+W +M+ + D
Sbjct: 258 YMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMM--QLCIRDGRL 315
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
DD AL +FS++ S G++P+ + FS L+ C + G QIH +K +
Sbjct: 316 DD---------ALRVFSEMISEGVQPNEFAFSIALSACGSVCL---GRQIHCSAIKRDLM 363
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+D+ V AL++MY + G + V ++ L+SWT+ I+ + S +A+ L M
Sbjct: 364 TDIRVSNALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 423
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFV 536
G PN F L++C++ ++++ + +K D +C LI+M+
Sbjct: 424 HSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCL-----ALKLGCDFKVCTGNALINMYS 478
Query: 537 ---RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
R+G AFD + D + W+ I G +HG+ L
Sbjct: 479 KCGRIGSARLAFDVMDTHDV----MSWNSLIHGLAQHGDANLAL 518
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLN 380
+K G + +A LFD M N+V W I+G NG E A ++F+ +
Sbjct: 81 MKSGRLGDALDLFDRMPRKNVVAWTTAISG------------CTRNGRPEAAATMFADML 128
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
SG+ P+ + ++ L C+ AL GEQ+H+L ++ GF +D +G+ L+ +Y +CG +
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLR 188
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF M ++ +TS+++ + +A+ + M G++PN+ T LA C
Sbjct: 189 AAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECP 248
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
G+ + GY + + LID + R G A + ++ + N V W
Sbjct: 249 R-GIGEQIHGYMLKVMGSQSVYA----STALIDFYSRYGDFGTAKTVFENLESK-NVVSW 302
Query: 561 SVFIAGCRRHGNME 574
+ C R G ++
Sbjct: 303 CSMMQLCIRDGRLD 316
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 10/208 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG SE +L Q + +EG ++ S L C + L +H +K G
Sbjct: 410 NGFSEKAVALLLQ----MHSEGFTPNDYAFSSGLSSCADLALLHQGRQLHCLALKLGC-- 463
Query: 108 DFFVMT--FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
DF V T L+N+Y KCG + A+ FD + +V+SW SLI G Q+ LA+ F +
Sbjct: 464 DFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDANLALETFSE 523
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCG 224
M + P + T + L C+ ++ G+ + +Y S + + G
Sbjct: 524 MCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYACMIDMLGRNG 583
Query: 225 SLNSAIKAF-NRIREKNVMSWTTVIGAC 251
A++ N E +V+ W T++ +C
Sbjct: 584 RFAEALRMIENMPFEPDVLIWKTLLASC 611
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DVV+ ++ K GR+ A +F M + +++WT+ I+G + A +F DML
Sbjct: 69 DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLG 539
+GV PN ALAAC+ AG + ++ + D ++ CLI+++ R G
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLG---EQVHSLAVRAGFAADAWIGSCLIELYSRCG 185
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAML 597
+ A + ++M+ P+ V ++ ++ R+G + Q+ + L+P + +ML
Sbjct: 186 SLRAAEEVFRRME-APDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSML 244
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/581 (34%), Positives = 320/581 (55%), Gaps = 20/581 (3%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
TA++ CSS+ R +H V+K + +G+ L S Y G A++ F+ + +K
Sbjct: 46 TAISTCSSISYCR---ALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDK 102
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+++SW ++I + L +M E G++PNE T+ + S C + L VG +
Sbjct: 103 DLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCI 162
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H + +K G ++V NS++ LY KCG ++ A LF+GMS +LV+WN+M+A H M L
Sbjct: 163 HGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHVHM-GL 221
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
A+ + + F + +G+ D T S+L C L + E +H L G
Sbjct: 222 AE----------KGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGG 271
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
++ + TAL+++Y K G + + +VF M ++WT+M++ +A H +A++ FE
Sbjct: 272 LDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFE 331
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M+ GV P+ VTF L+ACS++G+V E YF++M + Y ++ ++HY C++D+ R
Sbjct: 332 LMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRS 391
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G + +A+ IK M EPN +W I CR GN+ELG AE+L L P D +Y L
Sbjct: 392 GHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLS 451
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ +AG+W D + V+ L +E L S+I +K++ F D HP + +I+ L+
Sbjct: 452 NMYSAAGQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLE 511
Query: 659 ELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
ELV K + G+ + + L D +E HSEKLAIAFGLL T P+++ K+
Sbjct: 512 ELVRKNREVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIR 571
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH F K+I+ + R II+RD+KR H F NG C+C D+
Sbjct: 572 ICGDCHGFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDY 612
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 171/337 (50%), Gaps = 15/337 (4%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
S+ ++ + C S+S +H ++K+ ++ F+ LV+ Y + G ++A ++FD
Sbjct: 41 VSALITAISTC---SSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFD 97
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIR 192
LP ++VSW SLISG+ + + + + + M E G P VT+ ++AC+ + +
Sbjct: 98 ELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELD 157
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
+GK IH VK + V NSL +LY CG L +A F + ++++SW +++
Sbjct: 158 VGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHV 217
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
G A +G+ +F M GI ++ T+ S+ C + ++ VH + G NL
Sbjct: 218 HMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLA 277
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+ +++ LY K G + ++ K+F GM + + V W AM++ +A H G EA
Sbjct: 278 IATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAM-----------HGRGREA 326
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+ F + G+ PD TF+ +L+ CS +E+G+
Sbjct: 327 IEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKN 363
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 4/285 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K + + ++ C L + IH VK+G + V+ L+N+YGKCG +E A
Sbjct: 135 GLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAA 194
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+F+ + ++VSW S+++ +V E I F+ M AG T+ + L AC +L
Sbjct: 195 CCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENL 254
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+L + +H Y++ + + ++ +L LY+ G+L+ + K F + + ++WT ++
Sbjct: 255 GVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAML 314
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ +G + + F M+ EG+ P+ T T + S C + G + + Y
Sbjct: 315 SSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEF-YG 373
Query: 309 SNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
LRV + ++ L + G +++A KL M N W A+I
Sbjct: 374 VELRVEHYSCMVDLLGRSGHLNDAYKLIKSMPMEPNSGVWGALIG 418
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 381 SSGMKPDLYTFSSILTICSRLV-------ALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+S + P + FS++ ++ S L+ ++ +H +K+ + +G LV+ Y
Sbjct: 24 ASQLSPTFHAFSNVDSLVSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSY 83
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA-GVRPNQVTF 492
+ G + A +F E+ + L+SW S+I+GF+ + L L M G++PN+VT
Sbjct: 84 VELGCTKDALELFDELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTV 143
Query: 493 VGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+ ++AC+ + G + M E K+ LI+++ + GC+E A
Sbjct: 144 IPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVN------SLINLYGKCGCLEAACCL 197
Query: 548 IKKMDFEPNEVIWSVFIA 565
+ M + + V W+ +A
Sbjct: 198 FEGMSVQ-SLVSWNSMVA 214
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 338/633 (53%), Gaps = 15/633 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G + S ++ C + +HAH +K+ D V LV +Y K G
Sbjct: 142 SMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNG 201
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTAL 182
+++ +F+ + +++SW S+I+G+ Q A+ VF +M+ E ++P G+A
Sbjct: 202 LVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAF 261
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC ++ S G+QIH +KY+ + D VG SL +Y+ C +L+SA AF RI +++
Sbjct: 262 RACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLV 321
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +++ A G + L FS+M G++P+ T+ + C +L G +HS
Sbjct: 322 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 381
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG ++ V NS++ +Y +C + A +F + ++VTWN+++ AQ
Sbjct: 382 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ-------- 433
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
HN E L +FS LN S D + +++L+ + L E +Q+HA K G + D
Sbjct: 434 ---HNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD 490
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDML 481
++ L++ Y KCG ++ A R+F M + R + SW+S+I G+A + +A LF M
Sbjct: 491 RMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMR 550
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+RPN VTF+G L ACS G V E Y+ +M+ EY I P +H C++D+ R G +
Sbjct: 551 SLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKL 610
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA +FI +M FEP+ ++W +A + H +ME+G AAE +L + P +Y +L +I+
Sbjct: 611 TEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIY 670
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
++G W + A +K R + ++ SW+++K ++ F D HP+S EI+ +L+ +
Sbjct: 671 AASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIG 730
Query: 662 EKAKCFGYKQQESFE--LTDEESASVYHSEKLA 692
+ GY + S++ + D + +++ E LA
Sbjct: 731 MEMIKAGYVPKHSWKHAIVDHIDSDLFNEEMLA 763
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 269/530 (50%), Gaps = 38/530 (7%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-------DFFVMTFLVNVYGKCGNMEEAQ 129
Y +L+ C +SL +H H+V + S + + L+ +YG+C + A+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+VFD +P N VSW S+I+ +VQN + A+ +F ML +G LG+A+ AC+ L
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G+Q+HA+ +K + D V N+L ++YS G ++ F RI++K+++SW ++I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 250 ACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G ++ L+ F +M+ EG PNEF S CG + S G Q+H L IK
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+L V S+ +Y +C +D A+ F + +LV+WN+++ + S
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAY-----------SVEGL 335
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+EAL +FS++ SG++PD T +L C AL G IH+ +K G DV V +
Sbjct: 336 LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNS 395
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP- 487
L++MY +C + A VF E+ + +++W S++T A H+ + L+LF LL P
Sbjct: 396 LLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS--LLNKSEPS 453
Query: 488 -NQVTFVGALAACSNAGMVYEALGYFEMMQK----EYKIKPVMDHYM--CLIDMFVRLGC 540
++++ L+A + LGYFEM+++ +K V D + LID + + G
Sbjct: 454 LDRISLNNVLSASAE-------LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGS 506
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF--YAAEQLLKLKP 588
+++A + M + WS I G + G + F ++ + L ++P
Sbjct: 507 LDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRP 556
>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 207/610 (33%), Positives = 334/610 (54%), Gaps = 49/610 (8%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC L+S+ LGKQ+H+ + D + N L +LYS G L +A+ F+R+ +N+
Sbjct: 76 LQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMPRRNI 135
Query: 242 MS-------------------------------WTTVIGACGENGEAVQGLRFFSKMLSE 270
MS W ++ + + L FS+M
Sbjct: 136 MSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSRMNEL 195
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
P+E++L S+ C + +L G QVH+ +K G+ NL V S+ ++Y+K G + +
Sbjct: 196 SFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKAGSMHDG 255
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLY 389
+++ + M +LV WN +++G AQ G E L + + +G +PD
Sbjct: 256 ERVINWMPDCSLVAWNTLMSGKAQ------------KGYFEGVLDQYCMMKMAGFRPDKI 303
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF S+++ CS L L QG+QIHA +K G S+V V ++LV+MY +CG ++ + + F+E
Sbjct: 304 TFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLEC 363
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R ++ W+SMI + H +A++LF +M + N++TF+ L ACS+ G+ + L
Sbjct: 364 KERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGL 423
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
G F+MM K+Y +K + HY CL+D+ R GC+EEA I+ M + + +IW ++ C+
Sbjct: 424 GLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKI 483
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H N E+ A+++L++ P+D SY +L +I+ SA RW++V+ V+ +++ + + S
Sbjct: 484 HKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEVRRAMKDKMVKKEPGIS 543
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD---EESASV- 685
W+ +K++V+ F D HP+ EI + L+EL + K GY S L D EE +
Sbjct: 544 WVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDTSSVLHDMDNEEKEQIL 603
Query: 686 -YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
+HSEKLAIAF L+NTP PI V+K+ +C DCH IK I+ + EIIVRDS R H F
Sbjct: 604 RHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEIKKLEIIVRDSSRFHHF 663
Query: 745 VNGHCTCRDF 754
NG C+C D+
Sbjct: 664 KNGTCSCGDY 673
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 218/457 (47%), Gaps = 48/457 (10%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
F+ LS + P++ + +LLQ C+ KS+S + +H+ I +G D F+ L+N
Sbjct: 57 AFESFLSEIWAEPRL----FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLN 112
Query: 118 VYGK-------------------------------CGNMEEAQKVFDNLPRINVVSWTSL 146
+Y K GN+E A+ +FD +P NV +W ++
Sbjct: 113 LYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAM 172
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
++G + E A+ +F M E P +LG+ L C+ L ++ G+Q+HAYV+K
Sbjct: 173 VTGLTKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGF 232
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
E + VG SL +Y GS++ + N + + ++++W T++ + G L +
Sbjct: 233 ECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCM 292
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M G +P++ T S+ S C + L G Q+H+ +K G +S + V +S++ +Y +CG
Sbjct: 293 MKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGC 352
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
+ ++ K F ++V W++MIA + H G EA+ +F+++ +
Sbjct: 353 LQDSIKTFLECKERDVVLWSSMIAAYG-----------FHGQGEEAIKLFNEMEQENLPG 401
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRV 445
+ TF S+L CS ++G + + +K G + + T LV++ + G +E A +
Sbjct: 402 NEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAM 461
Query: 446 FVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDML 481
M + I W ++++ H + A ++ +++L
Sbjct: 462 IRSMPVKADAIIWKTLLSACKIHKNAEIARRVADEVL 498
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 158/331 (47%), Gaps = 23/331 (6%)
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F LSE I +++ C + S+ +G Q+HSL G +S+ + N ++ LY K
Sbjct: 58 FESFLSE-IWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSK 116
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK-----DDLSAHNGGT-------- 370
G + A LFD M N+++ N MI + M +L D++ N T
Sbjct: 117 FGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGL 176
Query: 371 -------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EAL +FS++N PD Y+ S+L C+ L AL G+Q+HA +K GF ++
Sbjct: 177 TKFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNL 236
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
VVG +L +MY K G + RV M +L++W ++++G A L + M +A
Sbjct: 237 VVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMA 296
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G RP+++TFV +++CS ++ + K V L+ M+ R GC+++
Sbjct: 297 GFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSS-LVSMYSRCGCLQD 355
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ + E + V+WS IA HG E
Sbjct: 356 SIKTFLECK-ERDVVLWSSMIAAYGFHGQGE 385
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/717 (30%), Positives = 374/717 (52%), Gaps = 48/717 (6%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P +SLG + +L G + + S+L+ C L+ E +H +I++ G D +
Sbjct: 89 PHKSLG--SFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTG 146
Query: 113 TFLVNVYGKCGNMEE-------AQKVFDNL-PRINVVSWTSLISGYVQNSQPELAIHVFL 164
L+N+Y K +++ A +V D + R V S++ G ++
Sbjct: 147 NALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGNQGRKVSDI------ 200
Query: 165 DMLEAGNYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC 223
EA NY +C S E ++ + + +Y+ + ++G + + S
Sbjct: 201 ---EAFNYDV---------SCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDI-SHS 247
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
S++S K F + EK+++SW T+I NG + L +M ++P+ FTL+S+
Sbjct: 248 MSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVL 307
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
+ + + G ++H I+ G + + V +S++ +Y KC V ++ ++F ++ + +
Sbjct: 308 PLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGI 367
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
+WN++IAG Q NG E L F ++ + +KP Y+FSSI+ C+ L
Sbjct: 368 SWNSIIAGCVQ------------NGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLT 415
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
L G+Q+H + GF ++ + ++LV+MY KCG I A ++F M R ++SWT+MI
Sbjct: 416 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIM 475
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G A H + A++LFE M G+ PN V F+ L ACS+AG+V EA YF M ++ I
Sbjct: 476 GCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIA 535
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P ++HY + D+ R G +EEA+DFI M P +W+ ++ CR H N+++ A +
Sbjct: 536 PGVEHYAAVSDLLGRAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANR 595
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+L++ PK+ +Y +L +I+ +A RW++ A + R + +T SWI +++KVY+F
Sbjct: 596 ILEVDPKNTGAYILLANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMA 655
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGL 697
D HP +I + ++ L+E + GY S D EE Y HSE+LAI FG+
Sbjct: 656 GDESHPCYEKIREAMEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGI 715
Query: 698 LNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+NTP + I V K+ +C DCH K I+ + REI+VRD+ R H F NG C+C D+
Sbjct: 716 INTPAGTTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDY 772
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 240/509 (47%), Gaps = 54/509 (10%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL+ ++ KS S A+ +HA ++K + ++ L+++Y + ++ ++F+ L
Sbjct: 13 SLLRNPLSIKSRSQAQQLHAQVLKFQA-SSLCNLSLLLSIYSHINLLHDSLRLFNTLHFP 71
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++W S+I Y + P ++ F+ ML +G YP + + L AC+ L + LG+ +H
Sbjct: 72 PALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLH 131
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLN-------SAIKAFNRIREKNVMSWTTVIGAC 251
Y+++ + D GN+L ++YS L A + + + E+ S T
Sbjct: 132 GYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTER-TRSVRTASVLV 190
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS----SVCGTMLSLRVGAQVHSLGIKLGY 307
G G V + F+ +S + E + I S M + +G Q+ + +
Sbjct: 191 GNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMS- 249
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
VD +K+F+ M +LV+WN +IAG+A+ N
Sbjct: 250 -------------------VDSVRKIFEMMPEKDLVSWNTIIAGNAR------------N 278
Query: 368 G-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G E L++ ++ + +KPD +T SS+L + + V + +G++IH +++ G ++V V
Sbjct: 279 GLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVA 338
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
++L++MY KC R+ + RVF ++ R ISW S+I G + L + L+ F ML+A ++
Sbjct: 339 SSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIK 398
Query: 487 PNQVTFVGALAACSNAGMVY---EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
P +F + AC++ ++ + GY + I L+DM+ + G I
Sbjct: 399 PKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS----LVDMYAKCGNIRT 454
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
A +M + V W+ I GC HG+
Sbjct: 455 ARQIFDRMRLR-DMVSWTAMIMGCALHGH 482
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/411 (20%), Positives = 175/411 (42%), Gaps = 38/411 (9%)
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
S++S +Q+HA V+K+Q ++ L S+YS L+ +++ FN + ++W +
Sbjct: 20 SIKSRSQAQQLHAQVLKFQASSLCNLSLLL-SIYSHINLLHDSLRLFNTLHFPPALAWKS 78
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
VI +G + L F ML+ G+ P+ S+ C ++ L +G +H I++G
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+L N++M +Y K + ++ + G S V D+++
Sbjct: 139 LDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQV-------------------LDEMTER 179
Query: 367 NGGTEALSIFSKLNSSGMK-PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
S+ + + G K D+ F+ ++ SR + E + + + +
Sbjct: 180 TRSVRTASVL--VGNQGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNL 237
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
G + ++ ++ ++F M + L+SW ++I G A + L + L + +M A +
Sbjct: 238 GQQIKDISHSMS-VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANL 296
Query: 486 RPNQVTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
+P+ T L + + G + + E + LIDM+ +
Sbjct: 297 KPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVAS------SLIDMYAKCTR 350
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKPK 589
+ +++ + E + + W+ IAGC ++G + G Q+L K+KPK
Sbjct: 351 VVDSYRVFTLLT-ERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPK 400
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/625 (32%), Positives = 329/625 (52%), Gaps = 58/625 (9%)
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC--GSLNSAIKAFNRIREKNVMSW 244
S+ S++ Q+H V++ D V +L Y+ + + A+K F+ I NV W
Sbjct: 42 SITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIW 101
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
VI C EN + + + F+ +M+ + +PN+FT ++ C +++ G Q+H +K
Sbjct: 102 NIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVK 160
Query: 305 LGYASNLRVR------------------------------NSIMYLYLKCGLVDEAQKLF 334
G S++ ++ N+++ YLKCG+++ A+ LF
Sbjct: 161 HGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLF 220
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLA-----------KDDLS---------AHNGGTEALS 374
M N+ +WN MI G A+ +L +D++S + EAL
Sbjct: 221 AQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALE 280
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
IF ++ +P + SS+L CS + A++QG +HA + D V+GTAL++MY
Sbjct: 281 IFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYA 340
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCGR++ VF EM R + +W +MI G A H + AL+LF + ++PN +T VG
Sbjct: 341 KCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVG 400
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L AC++AG V + L F+ M++ Y + P ++HY C++D+ R G EA D I M +
Sbjct: 401 VLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMK 460
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
PN +W + CR HGN +L + LL+L+P++ Y +L +I+ GR++DV+ ++
Sbjct: 461 PNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIR 520
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES 674
L ++ + S + + V+ FK DG HPQ EI++ L + E+ + G+ S
Sbjct: 521 KLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTS 580
Query: 675 ---FELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
F++ +E E+A YHSEKLAIAFGL+NT I +VK+ +C DCH+ K+I+ +
Sbjct: 581 QVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIF 640
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
REIIVRD R H F NG C+C+DF
Sbjct: 641 DREIIVRDRVRYHHFKNGTCSCKDF 665
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 160/378 (42%), Gaps = 75/378 (19%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKC--GNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
+H ++++G QD +V L+ Y N + A KVF ++P NV W +I G ++N
Sbjct: 52 LHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK---------- 203
++ AI+ + M+ P T T ACS ++++ G+QIH +VVK
Sbjct: 112 NKLFKAIYFYGRMVIDAR-PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIK 170
Query: 204 --------------------YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
Y E D N++ Y CG L +A F ++ KN+ S
Sbjct: 171 SAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGS 230
Query: 244 WTTVIG--ACGEN-----------------------------GEAVQGLRFFSKMLSEGI 272
W +I A G N G + L F +M E
Sbjct: 231 WNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+P F L+S+ + C + ++ G VH+ + + + +++ +Y KCG +D +
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+F+ M + TWNAMI G L+ H +AL +FSKL MKP+ T
Sbjct: 351 VFEEMKEREIFTWNAMIGG-----------LAIHGRAEDALELFSKLQEGRMKPNGITLV 399
Query: 393 SILTICSRLVALEQGEQI 410
+LT C+ +++G +I
Sbjct: 400 GVLTACAHAGFVDKGLRI 417
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 2/238 (0%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++N K GN+ +A+K+FD + + +SW+S++ GY+ + + A+ +F M P
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L + L ACS++ +I G+ +HAY+ + + D +G +L +Y+ CG L+ + F
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++E+ + +W +IG +G A L FSK+ ++PN TL + + C +
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413
Query: 295 GAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
G ++ ++ G L ++ L + GL EA+ L + M N W A++
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLG 471
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 59 FQEALSVLTEGPKVQTSS----YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
++EAL + + + +T S+L C N ++ +HA++ + D + T
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+++Y KCG ++ +VF+ + + +W ++I G + + E A+ +F + E P
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+TL LTAC+ + G +I + + Y + + + L G + A
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLI 454
Query: 234 NRIREK-NVMSWTTVIGACGENG 255
N + K N W ++GAC +G
Sbjct: 455 NSMPMKPNAAVWGALLGACRIHG 477
>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
Length = 879
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/705 (30%), Positives = 381/705 (54%), Gaps = 31/705 (4%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEII--------HAHIVKTGSHQDFFVMTFL 115
++L EG K + +++ +L C K L A+++ H H+ H F T L
Sbjct: 191 AMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL-----HDSSFA-TAL 244
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
VN YG CG++E+A + F R+ ++ T++I+ Y Q + + A+ +F ML G
Sbjct: 245 VNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ L ACS + G+ IH ++ + + + + GN+L ++Y CGSL A++ F
Sbjct: 304 IACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
++ ++V+SW T+I A G++ + + L M +G++ ++ + + +C T +L G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKG 423
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+HS ++ G +++ + N+I+ +Y C D+A ++F M + V+WNAMI +A
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYA-- 481
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
A+ LS +EAL +F ++ G PD+ +F + L+ C+ +L +G+ +H
Sbjct: 482 ---AQPRLS-----SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIR 533
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+TG S++ V A++NMY K G + A ++F +M +ISW MI+ FA H + Q L+
Sbjct: 534 ETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLR 593
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK-IKPVMDHYMCLIDM 534
F M G PN VTFV ++ACS+ G+V + + F + ++ I P +HY C++D+
Sbjct: 594 FFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDL 653
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++ A FI +P+ VI S + + H ++E +AE L++L P +Y
Sbjct: 654 IARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAY 713
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ G+ ++ A ++ L E+ + + +S I +K +V+ F D + ++ EI
Sbjct: 714 VVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEIL 773
Query: 655 KVLDELVEKAKCFGYKQQESF---ELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVV 709
+ L+ L + GY + ++ DE+ + YHSEKLAIAFGL++T + + ++
Sbjct: 774 EELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRII 833
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K I+ +T REI+VRDS R H F NG C+C D+
Sbjct: 834 KNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDY 878
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 162/586 (27%), Positives = 284/586 (48%), Gaps = 54/586 (9%)
Query: 64 SVLTEGPKVQTSSYVSLLQEC-VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
S+ EG ++V++L C + + L IH + T D +V T L+++YGKC
Sbjct: 89 SMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKC 148
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
++E+A+KVFD + VV W ++I+ Y Q E AI VF ML G +T L
Sbjct: 149 SSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVL 208
Query: 183 TACSSLESIRLGKQIHAYVVKYQTE--DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
ACS L+ + + K + V + + + D+S +L + Y +CG L A +AF+R R +
Sbjct: 209 DACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLEL 268
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+++ T +I + + L F ML EG++ + ++ + C L G +H
Sbjct: 269 ILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHG 327
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
++ + ++ N+++ +Y KCG ++EA ++F M H ++++WN +IA H Q
Sbjct: 328 FMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQ------ 381
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H+ EAL + + G+K D +F + L +C+ AL +G IH+ +++G
Sbjct: 382 -----HSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEALAKGRMIHSWIVESGIK 436
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS-LSHQALQLFED 479
+DV++ A+++MY C + ASRVF M R +SW +MIT +A LS +AL LF+
Sbjct: 437 ADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQVSWNAMITAYAAQPRLSSEALLLFQQ 496
Query: 480 MLLAGVRPNQVTFV--------------GAL-------------AACSNAGM-VYEALGY 511
M L G P+ ++FV G L +NA + +Y G
Sbjct: 497 MQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGT 556
Query: 512 FEMMQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAG 566
+ +K + P+ D + +I F + G ++ F ++M+ E PN+V + ++
Sbjct: 557 LVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSA 616
Query: 567 CRRHGNMELGFYAAEQLLK----LKPKDCESYAMLLDIFVSAGRWE 608
C G ++ G LL + P+ E Y ++D+ AG+ +
Sbjct: 617 CSHGGLVKDGVQLFVSLLHDFPTISPR-AEHYYCMVDLIARAGKLD 661
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 226/495 (45%), Gaps = 25/495 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y LL + +SL + +HA I K+ + F+ LV +Y CG++ +A+ FD +P
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS-LESIRLGK 195
+ ++W LI + Q E A+H+F M G P N L ACS+ E + G+
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+IH + E D V +L +Y C S+ A K F+ IR K V+ W +I A +
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR--- 312
Q ++ F ML EG++ T + C + L V A++ L ++ +L
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEV-AKLVKLCVEEREHDHLHDSS 239
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+++ Y CG +++A + F + L+ AMI + Q EA
Sbjct: 240 FATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQ-----------RERWDEA 287
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L +F + G+K D ++L CS LE+G IH + F V G AL+NM
Sbjct: 288 LELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINM 347
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG +E A VF M R +ISW ++I HS +AL L M L GV+ ++++F
Sbjct: 348 YGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISF 407
Query: 493 VGALAACSNAGMVYEALGYFEMMQK---EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
V AL C+ + EAL M+ E IK + ++DM+ ++A +
Sbjct: 408 VNALPLCATS----EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFR 463
Query: 550 KMDFEPNEVIWSVFI 564
M ++V W+ I
Sbjct: 464 AMKVR-DQVSWNAMI 477
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 342/650 (52%), Gaps = 72/650 (11%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN-SQPELAIHVFLDMLEAGNYP 173
L+ Y +CG+++ A +VF+++ + V+W S+++ + + E A +F + +
Sbjct: 47 LIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQPNTVS 106
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
N+ L AC LG D + N++ S + G + A + F
Sbjct: 107 YNIML-----AC---HWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRLF 158
Query: 234 NRIREKNVMSWTTVIG---ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ + EKN +SW+ ++ ACG+ AV+ F++ P +T + + G
Sbjct: 159 SAMPEKNCVSWSAMVSGYVACGDLDAAVEC--FYA-------APMRSVITWTAMITG--- 206
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
Y+K G V+ A++LF MS LVTWNAMIA
Sbjct: 207 ------------------------------YMKFGRVELAERLFQEMSMRTLVTWNAMIA 236
Query: 351 GHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G+ + NG E L +F + +G+KP+ + +S+L CS L AL+ G+Q
Sbjct: 237 GYVE------------NGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQ 284
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H L K SD GT+LV+MY KCG ++ A +F+++ + ++ W +MI+G+A H
Sbjct: 285 VHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGA 344
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+AL+LF++M G++P+ +TFV L AC++AG+V + YF M++++ I+ +HY
Sbjct: 345 GKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYA 404
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R G + EA D IK M F+P+ I+ + CR H N+ L +AA+ LL+L P
Sbjct: 405 CMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPT 464
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
Y L +++ + RW+ VA ++ ++ + + +SWI I V+ F+ +D LHP+
Sbjct: 465 IATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPE 524
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVS 704
A I + L +L +K K GY F L D +E ++HSEKLAIAFGLL P+
Sbjct: 525 LASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGV 584
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V K+ +C DCH+ K I+++ REIIVRD+ R H F +G C+CRD+
Sbjct: 585 PIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDY 634
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 105/185 (56%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T ++ Y K G +E A+++F + +V+W ++I+GYV+N + E + +F MLE G
Sbjct: 201 TAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVK 260
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P ++L + L CS+L +++LGKQ+H V K DT+ G SL S+YS CG L A +
Sbjct: 261 PNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWEL 320
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F +I K+V+ W +I ++G + LR F +M EG++P+ T ++ C +
Sbjct: 321 FIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLV 380
Query: 293 RVGAQ 297
+G Q
Sbjct: 381 DLGVQ 385
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 6/206 (2%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG +E G + ++L G K S S+L C N +L + +H + K
Sbjct: 241 NGRAED----GLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSS 296
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D T LV++Y KCG++++A ++F +PR +VV W ++ISGY Q+ + A+ +F +M
Sbjct: 297 DTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMK 356
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSL 226
+ G P +T L AC+ + LG Q + + + E + L G L
Sbjct: 357 KEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKL 416
Query: 227 NSAIKAFNRIREK-NVMSWTTVIGAC 251
+ A+ + K + + T++GAC
Sbjct: 417 SEAVDLIKSMPFKPHPAIYGTLLGAC 442
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ-ALQLFED 479
++V+ L+ Y +CG I+ A RVF +M ++ ++W S++ FA + A QLFE
Sbjct: 39 NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEK 98
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVR 537
+ +PN V++ LA + V++A G+F+ M P+ D + +I +
Sbjct: 99 I----PQPNTVSYNIMLACHWHHLGVHDARGFFDSM-------PLKDVASWNTMISALAQ 147
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAA 580
+G + EA M E N V WS ++G G+++ FYAA
Sbjct: 148 VGLMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLDAAVECFYAA 192
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/633 (31%), Positives = 341/633 (53%), Gaps = 20/633 (3%)
Query: 45 IQLNGNSEPVRSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHI 100
+ LNG V++ + A V E + +T+ ++ +L C + ++ +H +
Sbjct: 218 VMLNGY---VKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLV 274
Query: 101 VKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAI 160
V +G D V L+ +Y KCG++ +A+++FD +P+ ++V+W +ISGYVQN + A
Sbjct: 275 VSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEAS 334
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F +M+ A P ++T + L S ++R GK+IH Y+++ D + ++L +Y
Sbjct: 335 CLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIY 394
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
C + A K F++ +++ T +I NG L F +L E ++ N TL
Sbjct: 395 FKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLA 454
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
S+ C + +L +G ++H +K G+ + V ++IM +Y KCG +D A + F G+S
Sbjct: 455 SVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK 514
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICS 399
+ V WN+MI +Q NG E A+ +F ++ +G K D + S+ L+ C+
Sbjct: 515 DAVCWNSMITSCSQ------------NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACA 562
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L AL G++IHA ++ F SD+ +AL++MY KCG ++ A RVF M + +SW S
Sbjct: 563 NLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNS 622
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
+I + NH +L LF ML G++P+ VTF+ ++AC +AG V E + YF M +E
Sbjct: 623 IIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEEL 682
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
I M+HY C++D+F R G + EAF I M F P+ +W + CR HGN+EL A
Sbjct: 683 GIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVA 742
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
+ L L P++ Y +L ++ +AG+WE V +++L +E + + SWI + + +
Sbjct: 743 SRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHM 802
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
F D HPQS++I+ +L L + + GY Q
Sbjct: 803 FVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQ 835
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 151/502 (30%), Positives = 248/502 (49%), Gaps = 23/502 (4%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
VS+LQ C + LS HA ++ G + + T L+ +Y CG +A+ +F L
Sbjct: 50 VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
W +I G+ Q + A+ + ML G P T + AC L S+ LG+ +
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H + E D VG+SL YS G ++ A F+R+ K+ + W ++ +NG+
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
F +M PN T + SVC + + + G+Q+H L + G + V N++
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTL 289
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAKDDLSAHNGGTEALSI 375
+ +Y KCG + +A++LFD M +LVTWN MI+G+ Q MD EA +
Sbjct: 290 LAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMD-------------EASCL 336
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ S+ MKPD TFSS L + S L QG++IH ++ G DV + +AL+++Y K
Sbjct: 337 FHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFK 396
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
C +E A ++F + + ++ T+MI+G+ + +++ AL++F +L +R N VT
Sbjct: 397 CRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASV 456
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFD-FIKKMD 552
L AC AG+ LG E+ K Y+ ++DM+ + G ++ A FI D
Sbjct: 457 LPAC--AGLAALTLGK-ELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 513
Query: 553 FEPNEVIWSVFIAGCRRHGNME 574
+ V W+ I C ++G E
Sbjct: 514 --KDAVCWNSMITSCSQNGKPE 533
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 152/315 (48%), Gaps = 11/315 (3%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L + L C+ + G+Q HA ++ + +G L +Y CG+ A F ++R
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
W +I G+ L F+ KML G P+++T + CG + S+ +G
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
VH +G+ ++ V +S++ Y + G + +A+ LFD M + V WN M+ G+ + D
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
A +F ++ + P+ TF+ +L++C+ + + G Q+H L + +
Sbjct: 229 W-----------DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
G D V L+ MY KCG + A R+F M L++W MI+G+ + +A LF
Sbjct: 278 GLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLF 337
Query: 478 EDMLLAGVRPNQVTF 492
+M+ A ++P+ +TF
Sbjct: 338 HEMISARMKPDSITF 352
>gi|356570490|ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g52630-like [Glycine max]
Length = 582
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/572 (35%), Positives = 330/572 (57%), Gaps = 19/572 (3%)
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
S+R G Q+H V+K E V + L + YS +S++K F+ K+ +W++VI
Sbjct: 22 SLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVIS 81
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ +N + LRFF +ML G+ P++ TL + + + SL + +H+L +K +
Sbjct: 82 SFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHHH 141
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ V +S++ Y KCG V+ A+K+FD M H N+V+W+ MI G++QM D+
Sbjct: 142 DVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQM---GLDE------- 191
Query: 370 TEALSIFSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL++F + ++ + +T SS+L +CS E G+Q+H L KT F S V +
Sbjct: 192 -EALNLFKRALEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVAS 250
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+L+++Y KCG +E +VF E+ R L W +M+ A H+ + + +LFE+M GV+P
Sbjct: 251 SLISLYSKCGVVEGGYKVFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKP 310
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N +TF+ L ACS+AG+V + F +M KE+ I+P HY L+D+ R G +EEA
Sbjct: 311 NFITFLCLLYACSHAGLVEKGEHCFGLM-KEHGIEPGSQHYATLVDLLGRAGKLEEAVLV 369
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
IK+M +P E +W + GCR HGN EL + A+++ ++ +L + + +AGRW
Sbjct: 370 IKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAAAGRW 429
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
E+ A + + R++ + + SW+ ++V++F D H ++ EI++ L+EL E+
Sbjct: 430 EEAARARKMMRDQGIKKETGLSWVEEGNRVHTFAAGDRSHGKTREIYEKLEELGEEMAKA 489
Query: 668 GYKQQESFELT----DEESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFI 722
GY SF L DE+S ++ YHSE+LAIAFGL+ P PI V+K+ +C DCH I
Sbjct: 490 GYVADTSFVLKEVDGDEKSQTIRYHSERLAIAFGLITFPPEWPIRVMKNLRVCGDCHTAI 549
Query: 723 KIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K I+ T R IIVRD+ R H+F +G CTC D+
Sbjct: 550 KFISKCTGRVIIVRDNNRFHRFEDGKCTCGDY 581
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 211/436 (48%), Gaps = 19/436 (4%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
+SL +H ++K G V L+N Y K + K+FD+ P + +W+S+I
Sbjct: 21 RSLRKGLQLHGQVIKLGFEAIPLVCHHLINFYSKTNLPHSSLKLFDSFPHKSATTWSSVI 80
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
S + QN P A+ F ML G P + TL TA + ++L S+ L +HA +K
Sbjct: 81 SSFAQNDLPLPALRFFRRMLRHGLLPDDHTLPTAAKSVAALSSLPLALSLHALSLKTAHH 140
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D VG+SL Y+ CG +N A K F+ + KNV+SW+ +I + G + L F +
Sbjct: 141 HDVFVGSSLVDTYAKCGDVNLARKVFDEMPHKNVVSWSGMIYGYSQMGLDEEALNLFKRA 200
Query: 268 LSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
L + I+ N+FTL+S+ VC +G QVH L K + S+ V +S++ LY KCG
Sbjct: 201 LEQDYDIRVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCG 260
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+V+ K+F+ + NL WNAM+ AQ AH G T +F ++ G+K
Sbjct: 261 VVEGGYKVFEEVKVRNLGMWNAMLIACAQ---------HAHTGRT--FELFEEMERVGVK 309
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
P+ TF +L CS +E+GE L + G LV++ + G++E A V
Sbjct: 310 PNFITFLCLLYACSHAGLVEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLV 369
Query: 446 FVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRPN--QVTFVGALAACSNA 502
EM + S W +++TG H + A + + + G + QV A AA A
Sbjct: 370 IKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQVLLSNAYAA---A 426
Query: 503 GMVYEALGYFEMMQKE 518
G EA +MM+ +
Sbjct: 427 GRWEEAARARKMMRDQ 442
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 76/186 (40%), Gaps = 1/186 (0%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+V + S+L+ C + +H KT FV + L+++Y KCG +E K
Sbjct: 208 RVNDFTLSSVLRVCSASTLFELGKQVHGLCFKTSFDSSCFVASSLISLYSKCGVVEGGYK 267
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF+ + N+ W +++ Q++ +F +M G P +T L ACS
Sbjct: 268 VFEEVKVRNLGMWNAMLIACAQHAHTGRTFELFEEMERVGVKPNFITFLCLLYACSHAGL 327
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS-WTTVIG 249
+ G+ + ++ E + +L L G L A+ + + S W ++
Sbjct: 328 VEKGEHCFGLMKEHGIEPGSQHYATLVDLLGRAGKLEEAVLVIKEMPMQPTESVWGALLT 387
Query: 250 ACGENG 255
C +G
Sbjct: 388 GCRIHG 393
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 338/633 (53%), Gaps = 15/633 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G + S ++ C + +HAH +K+ D V LV +Y K G
Sbjct: 125 SMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNG 184
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTAL 182
+++ +F+ + +++SW S+I+G+ Q A+ VF +M+ E ++P G+A
Sbjct: 185 LVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAF 244
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC ++ S G+QIH +KY+ + D VG SL +Y+ C +L+SA AF RI +++
Sbjct: 245 RACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLV 304
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +++ A G + L FS+M G++P+ T+ + C +L G +HS
Sbjct: 305 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 364
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG ++ V NS++ +Y +C + A +F + ++VTWN+++ AQ
Sbjct: 365 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ-------- 416
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
HN E L +FS LN S D + +++L+ + L E +Q+HA K G + D
Sbjct: 417 ---HNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD 473
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDML 481
++ L++ Y KCG ++ A R+F M + R + SW+S+I G+A + +A LF M
Sbjct: 474 RMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMR 533
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+RPN VTF+G L ACS G V E Y+ +M+ EY I P +H C++D+ R G +
Sbjct: 534 SLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKL 593
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA +FI +M FEP+ ++W +A + H +ME+G AAE +L + P +Y +L +I+
Sbjct: 594 TEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIY 653
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
++G W + A +K R + ++ SW+++K ++ F D HP+S EI+ +L+ +
Sbjct: 654 AASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIG 713
Query: 662 EKAKCFGYKQQESFE--LTDEESASVYHSEKLA 692
+ GY + S++ + D + +++ E LA
Sbjct: 714 MEMIKAGYVPKHSWKHAIVDHIDSDLFNEEMLA 746
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/530 (28%), Positives = 259/530 (48%), Gaps = 55/530 (10%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-------DFFVMTFLVNVYGKCGNMEEAQ 129
Y +L+ C +SL +H H+V + S + + L+ +YG+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR-------- 98
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
N VSW S+I+ +VQN + A+ +F ML +G LG+A+ AC+ L
Sbjct: 99 ---------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 149
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G+Q+HA+ +K + D V N+L ++YS G ++ F RI++K+++SW ++I
Sbjct: 150 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 209
Query: 250 ACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G ++ L+ F +M+ EG PNEF S CG + S G Q+H L IK
Sbjct: 210 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 269
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+L V S+ +Y +C +D A+ F + +LV+WN+++ + S
Sbjct: 270 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAY-----------SVEGL 318
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+EAL +FS++ SG++PD T +L C AL G IH+ +K G DV V +
Sbjct: 319 LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNS 378
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP- 487
L++MY +C + A VF E+ + +++W S++T A H+ + L+LF LL P
Sbjct: 379 LLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS--LLNKSEPS 436
Query: 488 -NQVTFVGALAACSNAGMVYEALGYFEMMQK----EYKIKPVMDHYM--CLIDMFVRLGC 540
++++ L+A + LGYFEM+++ +K V D + LID + + G
Sbjct: 437 LDRISLNNVLSASAE-------LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGS 489
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF--YAAEQLLKLKP 588
+++A + M + WS I G + G + F ++ + L ++P
Sbjct: 490 LDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRP 539
>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
Length = 879
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 214/705 (30%), Positives = 380/705 (53%), Gaps = 31/705 (4%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEII--------HAHIVKTGSHQDFFVMTFL 115
++L EG K + +++ +L C K L A+++ H H+ H F T L
Sbjct: 191 AMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHL-----HDSSFA-TAL 244
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
VN YG CG++E+A + F R+ ++ T++I+ Y Q + + A+ +F ML G
Sbjct: 245 VNFYGSCGDLEQAFRAFSR-HRLELILATAMITQYTQRERWDEALELFKVMLLEGVKLDR 303
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
+ L ACS + G+ IH ++ + + + + GN+L ++Y CGSL A++ F
Sbjct: 304 IACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRS 363
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
++ ++V+SW T+I A G++ + + L M +G++ ++ + + +C +L G
Sbjct: 364 MQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKG 423
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
+HS ++ G +++ + N+I+ +Y C D+A ++F M + V+WNAMI +A
Sbjct: 424 RMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYA-- 481
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
A+ LS +EAL +F ++ G PD+ +F + L+ C+ +L +G+ +H
Sbjct: 482 ---AQPRLS-----SEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIR 533
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+TG S++ V A++NMY K G + A ++F +M +ISW MI+ FA H + Q L+
Sbjct: 534 ETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLR 593
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK-IKPVMDHYMCLIDM 534
F M G PN VTFV ++ACS+ G+V + + F + ++ I P +HY C++D+
Sbjct: 594 FFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDL 653
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G ++ A FI +P+ VI S + + H ++E +AE L++L P +Y
Sbjct: 654 IARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAY 713
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +++ G+ ++ A ++ L E+ + + +S I +K +V+ F D + ++ EI
Sbjct: 714 VVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEIL 773
Query: 655 KVLDELVEKAKCFGYKQQESF---ELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVV 709
+ L+ L + GY + ++ DE+ + YHSEKLAIAFGL++T + + ++
Sbjct: 774 EELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAPGTSLRII 833
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K I+ +T REI+VRDS R H F NG C+C D+
Sbjct: 834 KNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDY 878
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 162/586 (27%), Positives = 284/586 (48%), Gaps = 54/586 (9%)
Query: 64 SVLTEGPKVQTSSYVSLLQEC-VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
S+ EG ++V++L C + + L IH + T D +V T L+++YGKC
Sbjct: 89 SMQLEGVAPVNRNFVAVLGACSADPELLEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKC 148
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
++E+A+KVFD + VV W ++I+ Y Q E AI VF ML G +T L
Sbjct: 149 SSVEDARKVFDGIRHKRVVEWNAMITAYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVL 208
Query: 183 TACSSLESIRLGKQIHAYVVKYQTE--DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
ACS L+ + + K + V + + + D+S +L + Y +CG L A +AF+R R +
Sbjct: 209 DACSKLKDLEVAKLVKLCVEEREHDHLHDSSFATALVNFYGSCGDLEQAFRAFSRHRLEL 268
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+++ T +I + + L F ML EG++ + ++ + C L G +H
Sbjct: 269 ILA-TAMITQYTQRERWDEALELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHG 327
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
++ + ++ N+++ +Y KCG ++EA ++F M H ++++WN +IA H Q
Sbjct: 328 FMREIRFDRHVNAGNALINMYGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQ------ 381
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H+ EAL + + G+K D +F + L +C+ AL +G IH+ +++G
Sbjct: 382 -----HSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEALAKGRMIHSWIVESGIK 436
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS-LSHQALQLFED 479
+DV++ A+++MY C + ASRVF M R +SW +MIT +A LS +AL LF+
Sbjct: 437 ADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQVSWNAMITAYAAQPRLSSEALLLFQQ 496
Query: 480 MLLAGVRPNQVTFV--------------GAL-------------AACSNAGM-VYEALGY 511
M L G P+ ++FV G L +NA + +Y G
Sbjct: 497 MQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRETGLESNMTVANAVLNMYAKSGS 556
Query: 512 FEMMQKEYKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAG 566
+ +K + P+ D + +I F + G ++ F ++M+ E PN+V + ++
Sbjct: 557 LVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFFRRMNHEGKLPNDVTFVSVVSA 616
Query: 567 CRRHGNMELGFYAAEQLLK----LKPKDCESYAMLLDIFVSAGRWE 608
C G ++ G LL + P+ E Y ++D+ AG+ +
Sbjct: 617 CSHGGLVKDGVQLFVSLLHDFPTISPR-AEHYYCMVDLIARAGKLD 661
Score = 206 bits (523), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 226/495 (45%), Gaps = 25/495 (5%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
Y LL + +SL + +HA I K+ + F+ LV +Y CG++ +A+ FD +P
Sbjct: 1 YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS-LESIRLGK 195
+ ++W LI + Q E A+H+F M G P N L ACS+ E + G+
Sbjct: 61 VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+IH + E D V +L +Y C S+ A K F+ IR K V+ W +I A +
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR--- 312
Q ++ F ML EG++ T + C + L V A++ L ++ +L
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEV-AKLVKLCVEEREHDHLHDSS 239
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
+++ Y CG +++A + F + L+ AMI + Q EA
Sbjct: 240 FATALVNFYGSCGDLEQAFRAF-SRHRLELILATAMITQYTQ-----------RERWDEA 287
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L +F + G+K D ++L CS LE+G IH + F V G AL+NM
Sbjct: 288 LELFKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINM 347
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG +E A VF M R +ISW ++I HS +AL L M L GV+ ++++F
Sbjct: 348 YGKCGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISF 407
Query: 493 VGALAACSNAGMVYEALGYFEMMQK---EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
V AL C+ + EAL M+ E IK + ++DM+ ++A +
Sbjct: 408 VNALPLCAAS----EALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFR 463
Query: 550 KMDFEPNEVIWSVFI 564
M ++V W+ I
Sbjct: 464 AMKAR-DQVSWNAMI 477
>gi|12039323|gb|AAG46111.1|AC073166_9 hypothetical protein [Oryza sativa Japonica Group]
Length = 787
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 199/611 (32%), Positives = 330/611 (54%), Gaps = 20/611 (3%)
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ + P A+ VF + A P + T AL+AC+ L +R G+ + +DD
Sbjct: 84 HSRRGSPASALRVFRALPPAAR-PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V +SL LY+ G++ A+K F R+ ++ ++W+T++ G+ + ++ + +M
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+G++ +E + + C ++R+GA VH ++ G ++ S++ +Y K GL+D
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDL 388
A ++F M H N V+W+AMI+G AQ NG + EAL +F + +SG++PD
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQ------------NGQSDEALRLFRNMQASGIQPDS 310
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
S L CS + L+ G +H ++ F + ++GTA ++MY KCG + A +F
Sbjct: 311 GALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNM 369
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+S R LI W +MI H AL LF++M G+RP+ TF L+A S++G+V E
Sbjct: 370 ISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEG 429
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+F M +KI P HY+CL+D+ R G +EEA D + M EP IW ++GC
Sbjct: 430 KLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCL 489
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ +ELG A+ +L+L+P D A++ +++ + +W+ V V+ L ++ +
Sbjct: 490 NNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGC 549
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
S I I+ + F D HPQ EI + +L + + GY + F D +E
Sbjct: 550 SSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQ 609
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
YHSE+LAIAFGLLNT + ++++K+ +C DCH+ IK I+ + REI+VRD+KR H
Sbjct: 610 LSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHH 669
Query: 744 FVNGHCTCRDF 754
F +G C+CRD+
Sbjct: 670 FKDGVCSCRDY 680
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 232/460 (50%), Gaps = 26/460 (5%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L + ++++ L C L E + G D FV + L+++Y + G M
Sbjct: 100 LPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAM 159
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A KVF +PR + V+W+++++G+V QP AI ++ M E G V + + AC
Sbjct: 160 GDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQAC 219
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ ++R+G +H +++++ D SL +Y+ G L+ A + F + +N +SW+
Sbjct: 220 TAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWS 279
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I +NG++ + LR F M + GIQP+ L S C + L++G VH ++
Sbjct: 280 AMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR 339
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ N + + + +Y KCG + AQ LF+ +S +L+ WNAMIA A
Sbjct: 340 -FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIAC-----------CGA 387
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
H G +AL++F ++N +GM+PD TF+S+L+ S +E+G+ + ++
Sbjct: 388 HGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEK 447
Query: 426 G-TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDML-- 481
LV++ + G +E AS + M ++ W ++++G L+++ L+L E +
Sbjct: 448 HYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG----CLNNKKLELGESIADN 503
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ ++P+ VG LA SN +Y A ++ +++ K+
Sbjct: 504 ILELQPDD---VGVLALVSN---LYAATKKWDKVRQVRKL 537
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 222/711 (31%), Positives = 358/711 (50%), Gaps = 114/711 (16%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG--SHQ--------------------- 107
K + VSLL+ N+ + + +HAH+ KTG S Q
Sbjct: 18 KTYAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQ 77
Query: 108 --------DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN-------------------- 139
D V +++ + GN++EA+K+FD +P+ N
Sbjct: 78 ISKDFDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRES 137
Query: 140 -----------VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VVSWT+ ISGYVQN A+ +F+ +LE+ P VT + + AC++L
Sbjct: 138 MWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANL 197
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV- 247
LG + +VK E D +V NSL +L G ++ A + F+R+ EK+V+SWT +
Sbjct: 198 GDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAIL 257
Query: 248 ------------------------------IGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
I ++G + LR F +M+ EG +PN
Sbjct: 258 DLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNIS 317
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+SI S ++ +L+ G +H K+G+ ++ V +S++ +Y KCG + + LFD +
Sbjct: 318 CFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTI 377
Query: 338 SHVNLVTWNAMIAGHA--QMMDLAK---DDLSAHNGGT---------------EALSIFS 377
N+V+WNAM+ G++ M+ AK + + N + E +F+
Sbjct: 378 LEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFN 437
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
++ G P+ TFSS+L C+ +L++G+ +H +K G D VGTAL +MY K G
Sbjct: 438 EMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSG 497
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGAL 496
IE + +VF M + +SWT+MI G A L+ ++L LFE+M + + PN+V F+ L
Sbjct: 498 DIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVL 557
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
ACS++G+V + L YF M+ Y +KP H+ C++DM R G + EA +FI M F+P
Sbjct: 558 FACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPE 617
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
W+ ++GC+ + N EL A +L ++ K+C Y +L +I+ SAGRW DV V+ L
Sbjct: 618 TNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKL 677
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ + L ++ SW+ I+D+V+SF DG H QSAEI+++L+ L + KCF
Sbjct: 678 MKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILELLGYEMKCF 728
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 211/491 (42%), Gaps = 92/491 (18%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
+ +L K ++ S+++ C N + IVKTG D V L+ + +
Sbjct: 173 IKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRM 232
Query: 123 GNMEEAQKVFDNLPRINVVSWTS-------------------------------LISGYV 151
G + A++VFD + +VVSWT+ +I+ Y
Sbjct: 233 GEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYC 292
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
Q+ PE ++ +F M++ G P + L+A +S+E+++ G IH +V K E D
Sbjct: 293 QSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVF 352
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG----------- 260
V +SL +Y CG F+ I EKN++SW ++G NG +
Sbjct: 353 VSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRN 412
Query: 261 --------------------LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
F++M+ G PN+ T +S+ C + SL G +H
Sbjct: 413 NVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHG 472
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+KLG + V ++ +Y K G ++ ++K+F+ M N V+W AMI G LA+
Sbjct: 473 KIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQG------LAE 526
Query: 361 DDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQG-------EQIHA 412
L+ E+L++F ++ +S + P+ F ++L CS +++G E ++
Sbjct: 527 SGLAE-----ESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYG 581
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI-SWTSMITG---FANHS 468
L K T +V+M + GR+ A M + +W ++++G + N
Sbjct: 582 LKPKGRHF------TCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEE 635
Query: 469 LSHQ-ALQLFE 478
L+ + A +L+E
Sbjct: 636 LAERVAGKLWE 646
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F E V E G S++ SLL C + SL + +H IVK G D +V T
Sbjct: 429 FDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTA 488
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-P 173
L ++Y K G++E ++KVF+ +P+ N VSWT++I G ++ E ++ +F +M + + P
Sbjct: 489 LTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAP 548
Query: 174 TNVTLGTALTACS 186
V L ACS
Sbjct: 549 NEVMFLAVLFACS 561
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 205/610 (33%), Positives = 322/610 (52%), Gaps = 49/610 (8%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG----------------- 224
L +C L S+ GKQ+H+ ++ D + N L + YS G
Sbjct: 69 LQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNV 128
Query: 225 --------------SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
L SA K F+ + E+N+ +W +I + Q L F +M
Sbjct: 129 MSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGL 188
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
G P+EFTL S+ C + SL G +VH+ +K G+ + V +S+ ++Y+K G + +
Sbjct: 189 GFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDG 248
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLY 389
+KL M +V WN +IAG AQ NG E L+ ++ + +G +PD
Sbjct: 249 EKLIKSMPIRTVVAWNTLIAGKAQ------------NGCPEEVLNQYNMMKMAGFRPDKI 296
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
TF S+L+ CS L L QG+QIHA +K G S + V ++L++MY + G +E + + FV+
Sbjct: 297 TFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDR 356
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
++ W+SMI + H +AL+LF M + N+VTF+ L ACS++G+ +
Sbjct: 357 ENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGT 416
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
YF++M K+YK+KP ++HY C++D+ R G +EEA I+ M +P+ +IW +A C+
Sbjct: 417 EYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKL 476
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H E+ +E+++KL P D SY +L +I SA W +V+ ++ R+ + + S
Sbjct: 477 HKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQIRKAMRDRSVRKEPGIS 536
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESAS 684
W+ +K+ V+ F D HPQ EI L EL+ + K GY + L D +E
Sbjct: 537 WLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPELGSVLHDMDNEEKEYNL 596
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
+HSEK AIAF L+NT PI V+K+ +C DCHN IK I+ + REIIVRD+ R H F
Sbjct: 597 AHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRIRNREIIVRDASRFHHF 656
Query: 745 VNGHCTCRDF 754
+G C+C ++
Sbjct: 657 KDGECSCGNY 666
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 235/501 (46%), Gaps = 49/501 (9%)
Query: 18 SRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSL----GFQEALSVLTEGPKVQ 73
+R+PS S + ++ + RS S I + + + SL ++A T
Sbjct: 3 NRKPSRSFNAFLNPLYSFTV-RSLSMKISSSASLQEFTSLCNDGRIKQAYDTFTSEIWSD 61
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG---------- 123
S + LLQ C+ SL + +H+ I+ +G +D F+ L+N Y K G
Sbjct: 62 PSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFS 121
Query: 124 ---------------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHV 162
++E AQK+FD + N+ +W ++I+G Q + A+ +
Sbjct: 122 NMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSL 181
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
F +M G P TLG+ L C+ L S+ G+++HA ++K E + VG+SL +Y
Sbjct: 182 FKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK 241
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
GSL+ K + + V++W T+I +NG + L ++ M G +P++ T S+
Sbjct: 242 SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSV 301
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
S C + +L G Q+H+ IK G +S L V +S++ +Y + G ++++ K F + ++
Sbjct: 302 LSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDV 361
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V W++MIA + H G EAL +F ++ M+ + TF S+L CS
Sbjct: 362 VLWSSMIAAYG-----------FHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSG 410
Query: 403 ALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCGRIERASRVFVEMSTRTL-ISWTSM 460
E+G + L +K L + T +V++ + GR+E A + M + I W ++
Sbjct: 411 LKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTL 470
Query: 461 ITGFANHSLSHQALQLFEDML 481
+ H + A ++ E+++
Sbjct: 471 LAACKLHKEAEMAERISEEII 491
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 45/240 (18%)
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR-------- 438
D FS +L C +L +L G+Q+H+L + +G D + L+N Y K G+
Sbjct: 61 DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLF 120
Query: 439 -----------------------IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+E A ++F EMS R + +W +MI G + QAL
Sbjct: 121 SNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALS 180
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
LF++M G P++ T L C+ AG A +++ +++ V+
Sbjct: 181 LFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHAC----LLKCGFELSSVVGS--S 234
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
L M+++ G + + IK M V W+ IAG ++G E L Y ++ +P
Sbjct: 235 LAHMYIKSGSLSDGEKLIKSMPIR-TVVAWNTLIAGKAQNGCPEEVLNQYNMMKMAGFRP 293
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 325/593 (54%), Gaps = 16/593 (2%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
ML +G P T A+ +C++L GKQ+H +V K + V SL S+Y C
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 226 LNSAIKAF--NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
+++A K F N K + + +++ N + F +M G++ N T+ +
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV 343
CG +L +G VH +K G + V N ++ +Y+K G +D +KLFD M L+
Sbjct: 121 QPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGLI 180
Query: 344 TWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
TWNAMI G+AQ NG L ++ ++ S G PD T +L+ C+ L
Sbjct: 181 TWNAMINGYAQ------------NGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLG 228
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
AL G+++ GF S+ + ALVNMY +CG +++A +F M ++++SWT++I
Sbjct: 229 ALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIG 288
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
G+ H A+ LF++M+ G++P+ FV L+ACS+AG+ + L YF +M+++Y ++
Sbjct: 289 GYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLR 348
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQ 582
P +HY C++D+ R G + EA + I+ M + +W + C+ H N+EL A EQ
Sbjct: 349 PGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQ 408
Query: 583 LLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
+++L+P + Y +L +++ AG E + V+ L R+ KL + S++ K +V+ F
Sbjct: 409 VIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFA 468
Query: 643 NDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-YHSEKLAIAFGLLNTP 701
D HPQ+ EI+K L+EL K ++ E +E S+ HSEKLA+AF LLNT
Sbjct: 469 GDRNHPQTNEIYKKLNELENLVKDLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLNTR 528
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ I+++K+ +C DCH FIK+++ + R+ +VRD+ R H F NG C+C+++
Sbjct: 529 KETEIIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEY 581
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 17/431 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQN 153
+H H+ KTG + FV T L+++YGKC ++ A+K+FD P R V + SL+SGY N
Sbjct: 32 LHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALN 91
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
S+ + + +F +M E G VT+ + C ++ LG +H + VK+ + D+SVG
Sbjct: 92 SRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVG 151
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N L ++Y G ++ K F+ + K +++W +I +NG A L + +M S+G
Sbjct: 152 NCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFC 211
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ TL + S C + +L VG +V G++SN + N+++ +Y +CG + +A+ +
Sbjct: 212 PDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDI 271
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FDGM ++V+W A+I G+ H G A+ +F ++ G+KPD F S
Sbjct: 272 FDGMPVKSVVSWTAIIGGYGM-----------HGQGEVAVGLFDEMIRGGIKPDGTAFVS 320
Query: 394 ILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+L+ CS +G + + K G + +V++ + GR+ A + M R
Sbjct: 321 VLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVR 380
Query: 453 TLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
+ W +++ H A FE ++ + P + L+ E +
Sbjct: 381 ADGALWGALLGACKIHRNVELAELAFEQVI--ELEPTNTGYYVLLSNVYTEAGNLEGILR 438
Query: 512 FEMMQKEYKIK 522
M+ ++ K+K
Sbjct: 439 VRMLMRKRKLK 449
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 206/691 (29%), Positives = 363/691 (52%), Gaps = 30/691 (4%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K T SY S++ + + + + A + + S D ++ T ++ Y + + A +
Sbjct: 8 KFCTFSYQSMITDHLRNQRIDEARTVFDKV----SFPDVYLYTMMITGYARNYRFDHALQ 63
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F +P +VVSW S+I G + +A +F +M E + V+ T +
Sbjct: 64 LFYEMPVKDVVSWNSMIKGCFDCADLTMARKLFDEMPER----SVVSWTTMINGFLQFGK 119
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
I + + + Y + ++ D + NS+ Y G + ++ F + +NV+SWT++IG
Sbjct: 120 IEVAEGLF-YKMPFR---DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGG 175
Query: 251 CGENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
++G + + L F +M+ G++ P T + + C +L G Q+H+ KLGY+
Sbjct: 176 LDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYS 235
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ + +++ Y C ++++ ++F G H+N+V W A++ G+ ++ +D
Sbjct: 236 FDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYG--LNCKHED------ 287
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
AL +F ++ G+ P+ +F+S L C L AL+ G +IH +K G +DV VG +
Sbjct: 288 ---ALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 344
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+ MY +CG + +F +S + ++SW S+I G A H AL F M+ + V P+
Sbjct: 345 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 404
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++TF G L+ACS++GM + F+ + + +DHY C++D+ R G +EEA + I
Sbjct: 405 EITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELI 464
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M + N ++W V ++ C H +E+ AA+ ++ L+P +Y +L +++ SA RW
Sbjct: 465 RNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWS 524
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV+ ++ ++ +++ SWI IK F D HP S I++ L+ L K K G
Sbjct: 525 DVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELG 584
Query: 669 YKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y + F L D E YHSE+LAI FGL++T S I V+K+ +C DCH+ IK
Sbjct: 585 YVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIK 644
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+I + R+IIVRDS R H F++G C+C D+
Sbjct: 645 LIAKIVRRKIIVRDSTRFHHFMDGRCSCGDY 675
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 60 QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++AL V + EG SS+ S L C ++L IH VK G D FV L
Sbjct: 286 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 345
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +CGN+ + +F + + N+VSW S+I G Q+ A+ F M+ + P
Sbjct: 346 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 405
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAF 233
+T L+ACS + G+ + Y + ++ + + + C + G L A +
Sbjct: 406 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSA-EVKLDHYACMVDILGRSGKLEEAEELI 464
Query: 234 NRIREK-NVMSWTTVIGAC 251
+ K N M W ++ AC
Sbjct: 465 RNMPVKANSMVWLVLLSAC 483
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 219/680 (32%), Positives = 364/680 (53%), Gaps = 37/680 (5%)
Query: 97 HAHIVKTG---SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYV 151
HA +K G HQ F L+++Y + G + +AQ++F R +VV+W +++S V
Sbjct: 37 HAFALKNGLLHGHQRF-AFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLV 95
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDT 210
Q+ + A+ DM+ G P VT +AL ACS LE + +G+++HAYV+K + ++
Sbjct: 96 QSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANS 155
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIRE--KNVMSWTTVIGACGENGEAVQGLRFFSKML 268
V ++L +Y+T + A + F+ + + K + W +I + G + LR F++M
Sbjct: 156 FVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARME 215
Query: 269 SE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+E G P E T+ S+ C + VH +K G A N V+N++M +Y + G
Sbjct: 216 AEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 275
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAG-----H-AQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
D A+++F + ++V+WN +I G H A LA++ +L
Sbjct: 276 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLARE--------------MQQLEE 321
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
G+ P+ T ++L C+ L A +G++IH ++ +DV VG+ALV+MY KCG +
Sbjct: 322 GGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLAL 381
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACS 500
+ VF + R I+W +I + H L +A LF+ M +G RPN+VTF+ ALAACS
Sbjct: 382 SRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACS 441
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV-I 559
++GMV L F M++++ ++P D C++D+ R G ++EA+ + M+ +V
Sbjct: 442 HSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSA 501
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
WS + CR H N+ LG A E+LL+L+P++ Y +L +I+ +AG+W A V++ R
Sbjct: 502 WSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRR 561
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FE 676
+++ SWI + ++ F + HP S E+ ++ L + GY S +
Sbjct: 562 RGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHD 621
Query: 677 LTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
+ D + A+V HSEKLAIAFGLL + I V K+ +C DCH K ++ + REI+
Sbjct: 622 MDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVAKNLRVCNDCHEAAKFLSKMVGREIV 681
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
+RD +R H F NG C+C D+
Sbjct: 682 LRDVRRFHHFRNGQCSCGDY 701
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 238/526 (45%), Gaps = 85/526 (16%)
Query: 166 MLEAGNYPTNVTLGTALTACSSLES----IRLGKQIHAYVVKYQT--EDDTSVGNSLCSL 219
ML G+ T+ TL + L A S L + +RLG++ HA+ +K N+L S+
Sbjct: 1 MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60
Query: 220 YSTCGSLNSAIKAFNRIR--EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
Y+ G + A + F +V++W T++ ++G + ++ M++ G++P+
Sbjct: 61 YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T S C + L VG ++H+ IK A+N V ++++ +Y V +A+++FD
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDM 180
Query: 337 M--SHVNLVTWNAMIAGHAQM-MDLAKDDLSAHNGGTEALSIFSKLNS-SGMKPDLYTFS 392
+ S L WNAMI G+AQ MD EAL +F+++ + +G P T +
Sbjct: 181 VPDSGKQLGMWNAMICGYAQAGMD------------EEALRLFARMEAEAGFVPCETTMA 228
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+L C+R A E +H +K G + V AL++MY + G+ + A R+F +
Sbjct: 229 SVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLP 288
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLL---AGVRPNQVTFVGALAACSNAGMVYEAL 509
++SW ++ITG A QL +M GV PN +T + L C A + A
Sbjct: 289 DVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGC--AILAAPAR 346
Query: 510 GYFEMMQKE---YKIKPVMDHYM----CLIDMFVRLGCI---EEAFDFIKKM-------- 551
G KE Y ++ +D + L+DM+ + GC+ FD + +
Sbjct: 347 G------KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVL 400
Query: 552 ------------------------DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLL 584
+ PNEV + +A C G ++ G F+A E+
Sbjct: 401 IMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDH 460
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDV-AVVKNLTREEKLSETDDWS 629
++P + A ++DI AGR ++ A+V ++ E+ + WS
Sbjct: 461 GVEPTP-DILACVVDILGRAGRLDEAYAMVTSMEAGEQ--QVSAWS 503
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 7/282 (2%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++ S+L C ++ + E +H ++VK G + FV L+++Y + G + A+++F
Sbjct: 225 TTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAM 284
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDML---EAGNYPTNVTLGTALTACSSLESI 191
+ +VVSW +LI+G V A + +M E G P +TL T L C+ L +
Sbjct: 285 VDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAP 344
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
GK+IH Y V++ + D +VG++L +Y+ CG L + F+R+ +N ++W +I A
Sbjct: 345 ARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAY 404
Query: 252 GENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQV-HSLGIKLGYAS 309
G +G + F +M + G +PNE T + + C + G Q+ H++ G
Sbjct: 405 GMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEP 464
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGM--SHVNLVTWNAMI 349
+ ++ + + G +DEA + M + W+ M+
Sbjct: 465 TPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/602 (31%), Positives = 323/602 (53%), Gaps = 11/602 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V +Y S + C LS A +HAH +K D V T +V+VY K GN+ +A
Sbjct: 247 GLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDA 306
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
++ F LP NV + +++ G V+ A+ +F M +G ++L +AC+ +
Sbjct: 307 RRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEV 366
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ G Q+H VK + D V N++ LY C +L A F + +++ +SW +I
Sbjct: 367 KGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAII 426
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +N + ++ML G++P++FT S+ C + SL G VH IK G
Sbjct: 427 AALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLG 486
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ V ++++ +Y KCG + EAQKL D + LV+WN++I+G S
Sbjct: 487 LDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISG-----------FSLTKQ 535
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA FS++ G+KPD +T++++L C+ L +E G+QIH +K L D + +
Sbjct: 536 SEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISST 595
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG + + +F + +SW +MI G+A H +AL++FE M A V PN
Sbjct: 596 LVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPN 655
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
TFV L ACS+ G++ + YF +M YK+ P ++H+ C++D+ R +EA +FI
Sbjct: 656 HATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFI 715
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M E + V+W ++ C+ ++E+ AA +L+L P D Y +L +++ +G+W
Sbjct: 716 RSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWV 775
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
DV+ + L R+ +L + SWI ++ +++ F D +HP+S E++++L+ L+ + K G
Sbjct: 776 DVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSG 835
Query: 669 YK 670
Y+
Sbjct: 836 YE 837
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 266/525 (50%), Gaps = 26/525 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
G + ++ LL+ C L+ IHA VKTG D + LV++YGKC ++++
Sbjct: 145 RGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDD 204
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A + F + N VSW + I+G VQN Q + +F+ M G + +A +C++
Sbjct: 205 ALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAA 264
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ + +Q+HA+ +K D VG ++ +Y+ G+L A +AF + NV + +
Sbjct: 265 MPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAM 324
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
+ G + ++ F M G+ + +L+ + S C + G QVH L +K G+
Sbjct: 325 MVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGF 384
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
++ VRN+I+ LY KC + EA +F M + V+WNA+IA Q + +D AH
Sbjct: 385 DVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQ--NECYEDTIAH- 441
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
+++ SGM+PD +T+ S+L C+ L +LE G +H +K+G D V +
Sbjct: 442 --------LNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 493
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
+V+MY KCG I A ++ + + L+SW S+I+GF+ S +A + F +ML GV+P
Sbjct: 494 TVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKP 553
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA- 544
+ T+ L C+N + LG ++ + K + + D Y+ L+DM+ + G + ++
Sbjct: 554 DHFTYATVLDTCANLATI--ELGK-QIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSL 610
Query: 545 --FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
F+ +K+DF V W+ I G HG G A E +++
Sbjct: 611 LMFEKARKLDF----VSWNAMICGYALHGQ---GLEALEMFERMQ 648
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 270/566 (47%), Gaps = 55/566 (9%)
Query: 72 VQTSSYVSLLQECVN--RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
V T+++ L Q C + R +L+ + HA ++ +G FV L+ +Y +CG A
Sbjct: 15 VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74
Query: 130 KVFDNLPR-------------------------------INVVSWTSLISGYVQNSQPEL 158
VFD +P +VVSW +LISGY Q+
Sbjct: 75 GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
++ + ++M G TL L +C L+ + LG QIHA VK E D G++L
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVD 194
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y C SL+ A++ F+ + E+N +SW I C +N + +G+ F +M G+ ++
Sbjct: 195 MYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPA 254
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
S C M L Q+H+ IK ++S+ V +I+ +Y K G + +A++ F G+
Sbjct: 255 YASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
H N+ T NAM+ G L + L G EA+ +F + SG+ D+ + S + + C
Sbjct: 315 HHNVETCNAMMVG------LVRTGL-----GAEAMQLFQFMTRSGVGFDVISLSGVFSAC 363
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
+ + QG Q+H L +K+GF DV V A++++Y KC + A VF EM R +SW
Sbjct: 364 AEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWN 423
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQ-K 517
++I + + +ML +G+ P+ T+ L AC AG+ ++L Y ++ K
Sbjct: 424 AIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKAC--AGL--QSLEYGLVVHGK 479
Query: 518 EYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG--CRRHGNM 573
K +D ++ ++DM+ + G I EA ++ + V W+ I+G +
Sbjct: 480 AIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQ-ELVSWNSIISGFSLTKQSEE 538
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLD 599
F++ + +KP D +YA +LD
Sbjct: 539 AQRFFSEMLDMGVKP-DHFTYATVLD 563
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 126/237 (53%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + +Y S+L+ C +SL ++H +K+G D FV + +V++Y KCG
Sbjct: 445 MLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGA 504
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ EAQK+ D + +VSW S+ISG+ Q E A F +ML+ G P + T T L
Sbjct: 505 ITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDT 564
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C++L +I LGKQIH ++K + D + ++L +Y+ CG++ ++ F + R+ + +SW
Sbjct: 565 CANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSW 624
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+I +G+ ++ L F +M + PN T ++ C + L G Q L
Sbjct: 625 NAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHL 681
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 309/547 (56%), Gaps = 18/547 (3%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N L Y G L +A K F+ + +NV +W ++ +G + L FF M EG+Q
Sbjct: 4 NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+E+ L S+ C + + G QVH+ ++ G ++ V +S+ ++Y++CG + + +
Sbjct: 64 PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFS 392
+ +N+V+ N I+G Q NG E AL F + +G++ + TF
Sbjct: 124 LRALPSLNIVSCNTTISGRTQ------------NGDAEGALEFFCLMRGAGVEANAVTFV 171
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S +T CS L AL QG+QIHAL +KTG V V T+LV+MY +CG + + RV +E S
Sbjct: 172 SAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGT 231
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
L+ ++MI+ + H +A+ LF+ M+ AG PN+VTF+ L ACS++G+ E + F
Sbjct: 232 DLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCF 291
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
E+M K Y ++P + HY C++D+ R GC+ EA D I M +P+ VIW ++ C+
Sbjct: 292 ELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKK 351
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
++ AE++++L P D SY +L +I ++ RWEDV+ V+ RE+ + + SW+
Sbjct: 352 FDMAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVE 411
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF---ELTDEES--ASVYH 687
+K +++ F D H + EI + L+E++ + + GY S ++ DEE + +H
Sbjct: 412 LKGQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHH 471
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLAIAF L+ P PI V+K+ +C DCH IK+++ + REI+VRD R H F +G
Sbjct: 472 SEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDG 531
Query: 748 HCTCRDF 754
C+C D+
Sbjct: 532 KCSCGDY 538
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 175/351 (49%), Gaps = 13/351 (3%)
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+ Y K G++E A+K+FD +P NV +W ++++G + E ++ F M G P
Sbjct: 5 ILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 64
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
LG+ C+ L + G+Q+HAYVV+ + D VG+SL +Y CG L A
Sbjct: 65 DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAAL 124
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ N++S T I +NG+A L FF M G++ N T S + C + +L
Sbjct: 125 RALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALA 184
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+H+L IK G + V S++++Y +CG + +++++ S +LV +AMI+ +
Sbjct: 185 QGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYG 244
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
H G +A+ +F ++ ++G +P+ TF ++L CS ++G L
Sbjct: 245 -----------FHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 293
Query: 414 TLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMIT 462
KT G V T +V++ + G + A + + M + + W ++++
Sbjct: 294 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 344
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 4/297 (1%)
Query: 56 SLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
SLGF A+ EG + SL + C + + + +HA++V++G +D V + L
Sbjct: 50 SLGFFFAMR--REGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSL 107
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
++Y +CG + + + LP +N+VS + ISG QN E A+ F M AG
Sbjct: 108 AHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANA 167
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
VT +A+T+CS L ++ G+QIHA +K + V SL +YS CG L + +
Sbjct: 168 VTFVSAVTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLE 227
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+++ + +I A G +G + + F +M++ G +PNE T ++ C G
Sbjct: 228 YSGTDLVLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEG 287
Query: 296 AQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
L K G +++ I+ L + G ++EA+ L M + V W +++
Sbjct: 288 MNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 344
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 328/575 (57%), Gaps = 15/575 (2%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T L+ Y + G +A+ +FD +P +VV+WT++ISGY ++ A VF+DM++ GN
Sbjct: 48 TDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGND 107
Query: 173 PTNV-TLGTALTACSSLESIRLGKQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCG-SLNSA 229
P N T+ + L AC ++ + G+ +H +K + E V N+L +Y++CG + A
Sbjct: 108 PPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDA 167
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
F+ I+EKNV+SWTT+I G + L+ F +ML +G+ N +++ C ++
Sbjct: 168 CVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASI 227
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
S G Q+H+ IK G+ S+L V NSI+ +Y +CG + EA K F+ M+ +L+TWN +I
Sbjct: 228 GSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLI 287
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
AG+ + + E IFS++ S G P+ +TF+S++ C+ AL+ G+Q
Sbjct: 288 AGYER------------SDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQ 335
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H + G ++ + AL++MY KCG I + + F EMS L+SWTSM+ G+ H
Sbjct: 336 VHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGY 395
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+A++LF++M+ +G+RP+QV F+ L ACS+AG+V + L Y M +Y IKP + Y
Sbjct: 396 GKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYG 455
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
C++D+ R G +E+A+ I+ M F +E +W + C+ H LG AA++ L L+P
Sbjct: 456 CVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPN 515
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
E+Y ML +I+ + G+W + A ++ L + + SWI ++++VYSF + +
Sbjct: 516 MVETYVMLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIEVRNQVYSFVVGNKMGSH 575
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS 684
+++VL+ V+ K GY + + D+E +
Sbjct: 576 KEWVYEVLELPVQHMKEAGYVPEVDCLIHDQEDGT 610
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 144/292 (49%), Gaps = 11/292 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L +G + S ++ C + S + IH ++K G D V ++++Y +CG
Sbjct: 205 MLLDGVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGC 264
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ EA K F+++ ++++W +LI+GY ++ E +F M G P T + + A
Sbjct: 265 LSEANKYFNDMTEKDLITWNTLIAGYERSDSIE-PFFIFSQMESEGFSPNCFTFTSLVAA 323
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C++ +++ G+Q+H + + + + + N+L +Y+ CG++ + K F+ + N++SW
Sbjct: 324 CANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSW 383
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM----LSLR-VGAQVH 299
T+++ G +G + + F +M+ GI+P++ ++ C LR + ++
Sbjct: 384 TSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMIN 443
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIA 350
IK N + ++ L + G V++A +L M + + W A++
Sbjct: 444 DYHIK----PNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLG 491
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 8/190 (4%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG ++ SL+ C N +L + +H I + G + + L+++Y KCGN+
Sbjct: 307 SEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNII 366
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++QK F + N+VSWTS++ GY + + A+ +F +M+ +G P V L ACS
Sbjct: 367 DSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACS 426
Query: 187 SLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS-- 243
+ G + I+ + Y + + + + L G + A+ IR M+
Sbjct: 427 HAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPGRVED---AYQLIRSMPFMADE 483
Query: 244 --WTTVIGAC 251
W ++GAC
Sbjct: 484 SVWGALLGAC 493
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
++ T L+ Y + G +A +F EM R +++WT+MI+G+ + + QA +F DM+
Sbjct: 45 ILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKN 104
Query: 484 GVR-PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG--- 539
G PN T L AC V+ + K ++ + L+DM+ G
Sbjct: 105 GNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGM 164
Query: 540 ---CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
C+ F IK E N V W+ IAG GN
Sbjct: 165 RDACV--VFHDIK----EKNVVSWTTLIAGYTHRGN 194
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/571 (34%), Positives = 328/571 (57%), Gaps = 19/571 (3%)
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++L Q+HA+V+ + L +L GS++ + F + + +T++I +
Sbjct: 25 LKLLHQVHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIFLIVPNPDSFLFTSLIRS 84
Query: 251 CGE-NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ + +V L F+++M+ + P+ +T TS+ C +++LR G +H + G+ S
Sbjct: 85 TSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGS 144
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
++ V+ ++M Y KCG++ A+K+FD M ++VTWN+MI+G+ Q NG
Sbjct: 145 DVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQ------------NGF 192
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+ +F ++ G++P+ TF S+L+ C+ L A G +H + G +VV+GT+
Sbjct: 193 AKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTS 252
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+NMY +CG + +A VF M R +++WT+MI+G+ + QA++LF +M G+ PN
Sbjct: 253 LINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPN 312
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+TFV L+AC++AG+V E FE M++EY++ P ++H++CL+DM R G ++EA++FI
Sbjct: 313 SITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFI 372
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
K++ EP IW+ + C+ H N LG AE L +P + Y +L +I+ AGR +
Sbjct: 373 KEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGRMD 432
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V +V++ + L + +S I + K Y F D H ++ EI+ LD+L+ K + G
Sbjct: 433 QVEMVRDNMIRKCLKKQVGYSTIDLDRKTYLFSMGDKSHTETNEIYHYLDQLMRKCREAG 492
Query: 669 Y-----KQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y E + E A YHSEKLAIAFGLL T + I +VK+ MC DCH+ IK
Sbjct: 493 YVTVSDSVMHELEEEEREYALGYHSEKLAIAFGLLKTSRGTVIRIVKNLRMCEDCHSAIK 552
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ ++ REIIVRD R H F NG C+C D+
Sbjct: 553 YISVISNREIIVRDKLRFHHFKNGSCSCLDY 583
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 207/399 (51%), Gaps = 19/399 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ +Y LLQ K L +HAH++ +G F++T L+N+ G++ +++F
Sbjct: 11 HSPAYNLLLQAGPRLKLLHQ---VHAHVIVSGYGCSRFLLTKLLNLACAAGSISYTRQIF 67
Query: 133 DNLPRINVVSWTSLISGYVQ-NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
+P + +TSLI + ++ +++ + M+ + P+N T + + +C+ L ++
Sbjct: 68 LIVPNPDSFLFTSLIRSTSKFHNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVAL 127
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
R G+ IH +V+ D V +L S Y CG L +A K F+++R+++V++W ++I
Sbjct: 128 RHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGY 187
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG A + +R F +M G++PN T S+ S C + + +G VH + G N+
Sbjct: 188 EQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNV 247
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GT 370
+ S++ +Y +CG V +A+++FD M N+V W AMI+G+ NG G+
Sbjct: 248 VLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISGYGT------------NGYGS 295
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGTAL 429
+A+ +F ++ +G+ P+ TF ++L+ C+ + +G ++ ++ + + +V L
Sbjct: 296 QAVELFHEMRRNGLLPNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCL 355
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
V+M + G ++ A E+ + WT+M+ H
Sbjct: 356 VDMLGRAGLLDEAYNFIKEIHEEPAPAIWTAMLGACKMH 394
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 2/234 (0%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
V SL F + + P T + S+++ C + +L + IIH H++ G D +V T
Sbjct: 93 VYSLYFYTRMVLSNVAPSNYT--FTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQT 150
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L++ YGKCG + A+KVFD + +VV+W S+ISGY QN + AI +F M E G P
Sbjct: 151 ALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEP 210
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+ T + L+AC+ L + LG +H Y V + + +G SL ++Y+ CG+++ A + F
Sbjct: 211 NSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVF 270
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+ ++E+NV++WT +I G NG Q + F +M G+ PN T ++ S C
Sbjct: 271 DSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVLSACA 324
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 204/604 (33%), Positives = 339/604 (56%), Gaps = 16/604 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + +Y S+ + C ++IH ++KTG D V + LV +YGKC E+A
Sbjct: 103 KPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIW 162
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F+ +P +V W ++IS Y Q+ + A+ F M G P +VT+ TA+++C+ L
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ G +IH ++ D+ + ++L +Y CG L AI+ F ++ +K V++W ++I
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISG 282
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G G+ + ++ F +M +EG++P TL+S+ VC L G VH I+ +
Sbjct: 283 YGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPD 342
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ V +S+M LY KCG V+ A+K+F + +V+WN MI+G+ A
Sbjct: 343 VFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYV-----------AEGKLF 391
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EAL +FS++ S ++ D TF+S+LT CS+L ALE+G++IH L ++ ++ VV AL+
Sbjct: 392 EALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALL 451
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG ++ A VF + R L+SWTSMIT + +H ++ AL+LF +ML + V+P++V
Sbjct: 452 DMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRV 511
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
F+ L+AC +AG+V E YF M Y I P ++HY CLID+ R G + EA++ +++
Sbjct: 512 AFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571
Query: 551 MDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++V + S + CR H N++LG A L+ P D +Y +L +++ SA +W++
Sbjct: 572 NPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDE 631
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVL----DELVEKAK 665
V VV++ +E L + SWI I K+ F D H +FK L D + +++K
Sbjct: 632 VRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDESK 691
Query: 666 CFGY 669
F Y
Sbjct: 692 SFTY 695
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 276/576 (47%), Gaps = 56/576 (9%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ T + LL+ C+N KSL ++IH +V G D F+ L+N Y C + A+ V
Sbjct: 1 MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60
Query: 132 FDNLPRINVVS-WTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLE 189
FDN+ +S W L++GY +N A+ +F +L P + T + AC L
Sbjct: 61 FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
LGK IH ++K D VG+SL +Y C + AI FN + EK+V W TVI
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVIS 180
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
++G L +F M G +PN T+T+ S C +L L G ++H I G+
Sbjct: 181 CYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLL 240
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ + ++++ +Y KCG ++ A ++F+ M +V WN+MI+G+ D+
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDI----------- 289
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+ +F ++ + G+KP L T SS++ +CSR L +G+ +H T++ DV V ++L
Sbjct: 290 ISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSL 349
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y KCG++E A ++F + ++SW MI+G+ +AL LF +M + V +
Sbjct: 350 MDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDA 409
Query: 490 VTFVGALAACSNAGMVYEALGYFEMM--QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
+TF L ACS + + ++ +K + VM L+DM+ + G ++EAF
Sbjct: 410 ITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMG---ALLDMYAKCGAVDEAFSV 466
Query: 548 IK----------------------------------KMDFEPNEVIWSVFIAGCRRHGNM 573
K + + +P+ V + ++ C G +
Sbjct: 467 FKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLV 526
Query: 574 ELGFYAAEQLLKLK---PKDCESYAMLLDIFVSAGR 606
+ G Y Q++ + P+ E Y+ L+D+ AGR
Sbjct: 527 DEGCYYFNQMINVYGIIPR-VEHYSCLIDLLGRAGR 561
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 125/221 (56%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
EG K ++ SL+ C L + +H + ++ D FV + L+++Y KCG +E
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVE 360
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A+K+F +P+ VVSW +ISGYV + A+ +F +M ++ +T + LTACS
Sbjct: 361 LAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACS 420
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L ++ GK+IH +++ + +++ V +L +Y+ CG+++ A F + +++++SWT+
Sbjct: 421 QLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTS 480
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+I A G +G A L F++ML ++P+ +I S CG
Sbjct: 481 MITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACG 521
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 350/622 (56%), Gaps = 22/622 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH--QDFFVMTFL 115
F+ +++ G + S+V++ NA +++ +VK GS DFFV++
Sbjct: 202 AFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSA 261
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP-T 174
+ +Y + G ++ A+++FD N W ++I GYVQN+ P AI +F+ ++E+ +
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLD 321
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT +ALTA S L+ + LG+Q+HAY++K T + N++ +YS CGS+ ++ K F+
Sbjct: 322 DVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E++V++W T++ A +NG +GL M +G + TLT++ S+ + S +
Sbjct: 382 NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEI 441
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL--VTWNAMIAGH 352
G Q H+ I+ G + + ++ +Y K GL+ AQ+LF+ S + TWNAMIAG+
Sbjct: 442 GKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGY 500
Query: 353 AQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
Q NG E ++F K+ ++P+ T +SIL C+ + + G+QIH
Sbjct: 501 TQ------------NGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
++ +V VGTAL++MY K G I A VF E + +++T+MI+ + H +
Sbjct: 549 GFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGE 608
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL LF ML +G++P+ VTFV L+ACS AG+V E L F+ M++EYKI+P +HY C+
Sbjct: 609 RALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCV 668
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKL-KPK 589
DM R+G + EA++F+K + E N IW + CR HG ELG A +LL++ K
Sbjct: 669 ADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGS 728
Query: 590 DCESYAMLL-DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
Y +LL +I+ + G W++V V+ R++ L + SW+ + V F D HP
Sbjct: 729 SLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHP 788
Query: 649 QSAEIFKVLDELVEKAKCFGYK 670
Q AEI+++L++L + K GYK
Sbjct: 789 QCAEIYQMLEKLAMEMKDAGYK 810
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 238/485 (49%), Gaps = 39/485 (8%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT--NVTLGT 180
G+ +A +FD++PR V W ++I G++ N+ P A+ +F + A P + T +
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSS 109
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS----LNSAI------ 230
L AC+ S++LGK +H +V++ V NSL ++YSTC + L +A
Sbjct: 110 TLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCD 169
Query: 231 ---KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+ F+ +R++NV++W T+I + ++ + F M+ GI+P + ++
Sbjct: 170 LVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 288 TMLSLRVGAQVHSLGIKLG--YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
M ++ L +KLG + + V +S +++Y + G VD A+++FD N W
Sbjct: 230 RMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVAL 404
N MI G+ Q +N EA+ +F + + S D TF S LT S+L L
Sbjct: 290 NTMIGGYVQ-----------NNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWL 338
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
E G Q+HA LK+ + VV+ A++ MY +CG I + +VF M R +++W +M++ F
Sbjct: 339 ELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAF 398
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN---AGMVYEALGYFEMMQKEYKI 521
+ L + L L M G + VT L+ SN + +A Y +++
Sbjct: 399 VQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE- 457
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
MD Y LIDM+ + G I A F K D++ +E W+ IAG ++G E GF
Sbjct: 458 --GMDSY--LIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVF 513
Query: 581 EQLLK 585
++++
Sbjct: 514 RKMIE 518
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 152/603 (25%), Positives = 280/603 (46%), Gaps = 45/603 (7%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N+ P+ +L F + + PK + ++ S L+ C +SL + +H H++++
Sbjct: 81 NNMPIDALLFYARMRA-SPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSR 139
Query: 110 FVMTFLVNVYGKC-------------GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
V L+N+Y C N + ++VFD + + NVV+W ++IS YV+ +
Sbjct: 140 IVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERL 199
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE--DDTSVGN 214
A +F M+ G PT V+ A + ++ VVK ++ DD V +
Sbjct: 200 IEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVS 259
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQ 273
S +Y+ G ++ A + F+ E+N W T+IG +N ++ + F +++ SE
Sbjct: 260 SAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFV 319
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
++ T S + + L +G Q+H+ +K + + N+I+ +Y +CG + + K+
Sbjct: 320 LDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M ++VTWN M++ Q DD E L + + G D T ++
Sbjct: 380 FSNMLERDVVTWNTMVSAFVQN---GLDD--------EGLMLVFAMQKQGFMVDSVTLTA 428
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS--T 451
+L++ S L + E G+Q HA ++ G + + + L++MY K G I A ++F + S
Sbjct: 429 LLSLASNLRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYD 487
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R +W +MI G+ + LS + +F M+ VRPN VT L AC+ G + LG
Sbjct: 488 RDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTI--GLG- 544
Query: 512 FEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+ I+ ++ + L+DM+ + G I A + + E N V ++ I+
Sbjct: 545 --KQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAE-TLEKNSVTYTTMISSY 601
Query: 568 RRHGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW-EDVAVVKNLTREEKLSE 624
+HG E L + A +KP D ++ +L AG E + + +++ RE K+
Sbjct: 602 GQHGMGERALSLFHAMLGSGIKP-DSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQP 660
Query: 625 TDD 627
+ +
Sbjct: 661 SAE 663
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 13/227 (5%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG SE GF ++ + + + S+L C ++ + IH ++ ++
Sbjct: 503 NGLSEE----GFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNR 558
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ FV T L+++Y K G + A+ VF N V++T++IS Y Q+ E A+ +F ML
Sbjct: 559 NVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAML 618
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSL 226
+G P +VT L+ACS + G +I + + Y+ + C + G +
Sbjct: 619 GSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPS---AEHYCCVADMLGRV 675
Query: 227 NSAIKAFNRIR----EKNVMS-WTTVIGACGENGEAVQGLRFFSKML 268
++A+ ++ E N W +++GAC +GE G +K+L
Sbjct: 676 GRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLL 722
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 206/645 (31%), Positives = 341/645 (52%), Gaps = 50/645 (7%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ VY CG A+ +FD + NVV + +I YV N + A+ V+ M G P
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPD 119
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L A S +S+ +G QIH V+K + + VGN L ++Y C SL A + +
Sbjct: 120 MYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD 179
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
I ++V+SW +++ +NG L +M + ++PN+ T+ S+ S V
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNV 239
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
LY+K ++F ++ ++++WN MIA +
Sbjct: 240 -------------------------LYVK--------EMFLKLTKKSVISWNVMIAMYVN 266
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
++ EA+ ++S++ ++G++PD+ + S+L L AL G ++H
Sbjct: 267 -----------NSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFA 315
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ L ++++ AL++MY KCG + A VF +M R ++SWTS+I+ + A+
Sbjct: 316 ERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAV 375
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
+F +M +G+ P+ + FV LAACS+AG++ + YF +M E I P ++H+ C++D+
Sbjct: 376 AVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITPKLEHFACVVDL 434
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G I+EA+ FI++M EP+E +W ++ CR + NM +G AA++LL L P+ Y
Sbjct: 435 LGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYY 494
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ AGRW DVA ++++ + + + S + + D V++F D HPQS +I+
Sbjct: 495 VLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAGDHSHPQSKKIY 554
Query: 655 KVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVV 709
+ LD LV K K GY + L D EE Y HSEKLA+AF ++NT +PI V
Sbjct: 555 EELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVAFAIINTKPGTPIRVT 614
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K+I+ + REII+RD+ R H F G C+C D+
Sbjct: 615 KNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDY 659
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 188/395 (47%), Gaps = 48/395 (12%)
Query: 59 FQEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+++AL ++ T+G +Y +L+ SL IH ++K G + +V
Sbjct: 101 YKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNG 160
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ +YGKC +++EAQ+V D +P +VVSW S++S Y QN + A+ + +M P
Sbjct: 161 LIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPN 220
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T+ + L A ++ T D+ LY + F
Sbjct: 221 DCTMASLLPAVTN-----------------TTSDNV--------LYVK--------EMFL 247
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ +K+V+SW +I N + + +S+M + G++P+ ++ S+ G + +L +
Sbjct: 248 KLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSL 307
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +VH + NL + N+++ +Y KCG + +A+ +F+ M ++V+W ++I+ + +
Sbjct: 308 GRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGK 367
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
G +A+++F+++ +SG+ PD F S+L CS L+ G L
Sbjct: 368 C-----------GQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM 416
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ G + +V++ + G+I+ A +M
Sbjct: 417 AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQM 451
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 178/379 (46%), Gaps = 49/379 (12%)
Query: 195 KQIHAYVVKYQ-TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
K++H V+ Q + SVG L +Y+ CG A F+ I +KNV+ + +I +
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVN 97
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
N L + M ++G P+ +T + SL VG Q+H +K+G NL V
Sbjct: 98 NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-TEA 372
N ++ +Y KC + EAQ++ D + ++V+WN+M++ +AQ NG +A
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQ------------NGRFNDA 205
Query: 373 LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
L + ++ + +KP+ T +S+L A+T T SD V +
Sbjct: 206 LELCREMEALNLKPNDCTMASLLP---------------AVTNTT---SDNV-------L 240
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y K +F++++ +++ISW MI + N+S+ +A+ L+ M GV P+ V+
Sbjct: 241 YVK--------EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSI 292
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
V L A + + + +++ K+ P + LIDM+ + GC+ +A +M
Sbjct: 293 VSVLPAYGDLSALSLGRRVHKFAERK-KLLPNLLLENALIDMYAKCGCLRDARAVFNQMQ 351
Query: 553 FEPNEVIWSVFIAGCRRHG 571
F + V W+ I+ + G
Sbjct: 352 FR-DVVSWTSIISAYGKCG 369
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/633 (33%), Positives = 338/633 (53%), Gaps = 25/633 (3%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ +F +L + SLI + P A+ ++ ML++G P ++T + AC+
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
G +H +VVK E D+ + +SL LY+ L +A + FN ++V+SW +
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I ++ E F +M+ + + + V + R+ ++
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPE------- 320
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
NL NS++ ++KCG V++A LF M ++V+WN+M+A +AQ
Sbjct: 321 -RNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQC-----------G 368
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL++F ++ + G+KP T S+L+ C+ L AL++G +H + +VGT
Sbjct: 369 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 428
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
ALV+MY KCG+I A++VF M ++ +++W ++I G A H +A QLF++M AGV P
Sbjct: 429 ALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEP 488
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N +TFV L+ACS+AGMV E + M Y I+P ++HY C+ID+ R G +EEA +
Sbjct: 489 NDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMEL 548
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I M EPN + GCR HGN ELG ++L+ L+P Y +L +I+ +A +W
Sbjct: 549 IGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKW 608
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK-C 666
+D V+NL + +S+ S I +K V+ F D HP+S +I++ L+E+ + K
Sbjct: 609 DDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSA 668
Query: 667 FGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY E D+E A HSEKLAIA+GLL+ I +VK+ +CRDCH+
Sbjct: 669 IGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLLHLDSKEAIRIVKNLRVCRDCHHV 728
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK+I+ + REIIVRD R H F +G C+C DF
Sbjct: 729 IKLISKVYGREIIVRDRNRFHHFEDGECSCLDF 761
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
EAL++ + G K ++ VSLL C + +L +H +I + V T L
Sbjct: 371 NEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTAL 430
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
V++Y KCG + A +VF+ + +V++W ++I+G + + A +F +M EAG P +
Sbjct: 431 VDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPND 490
Query: 176 VTLGTALTACSSLESIRLGKQ-IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+T L+ACS + G++ + Y E + L + G L A++
Sbjct: 491 ITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIG 550
Query: 235 RIR-EKNVMSWTTVIGACGENG 255
+ E N + ++G C +G
Sbjct: 551 TMPMEPNPSALGALLGGCRIHG 572
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 329/598 (55%), Gaps = 13/598 (2%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
L+ C + L ++IH + K D FV + L+++Y KCG M +A KVF P+ +V
Sbjct: 249 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 308
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHA 199
V WTS+ISGY Q+ PELA+ F M+ + P VTL + +AC+ L + +LG+ +H
Sbjct: 309 VLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHG 368
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+V + ++ + NSL LY GS+ +A F + +K+++SW+T++ +NG
Sbjct: 369 FVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETD 428
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F++ML + I+PN T+ S+ C + +L G ++H L + G+ V ++M
Sbjct: 429 VLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMD 488
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y+KC ++A LF+ M +++ W + +G+A D+ H E++ +F +
Sbjct: 489 MYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA-------DNGMVH----ESMWVFRNM 537
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
SSG +PD ILT S L L+Q +HA +K GF ++ +G +L+ +Y KC I
Sbjct: 538 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSI 597
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML-LAGVRPNQVTFVGALAA 498
E A++VF M+ + +++W+S+I + H +AL+LF M + +PN VTF+ L+A
Sbjct: 598 EDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSA 657
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS++G++ E + F++M +YK+KP +HY ++D+ R+G ++ A D I M +
Sbjct: 658 CSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPD 717
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW + CR H N+++G AA+ L L P Y +L +I+ W ++ L +
Sbjct: 718 IWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVK 777
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
E++L++ S + +K++V SF D +H +S I+++L +L K + + Q E
Sbjct: 778 EKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVAFDPQVQIE 835
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 154/531 (29%), Positives = 273/531 (51%), Gaps = 29/531 (5%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
V LL+ C ++ S+S +H+ +K G D F++T L +Y + ++ A K+F P
Sbjct: 143 VKLLETCCSKLSISQ---LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPH 199
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDM-----LEAGNYPTNVTLGTALTACSSLESIR 192
V W +L+ Y + + +F M + P N ++ AL +C+ L +
Sbjct: 200 RTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLL 259
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LGK IH ++ K + + D VG++L LY+ CG +N A+K F + +V+ WT++I
Sbjct: 260 LGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 319
Query: 253 ENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
++G L FFS+M +SE + P+ TL S++S C + + ++G VH + G + L
Sbjct: 320 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKL 379
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG-T 370
+ NS+++LY K G + A LF MS ++++W+ M+A +A NG T
Sbjct: 380 CLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYAD------------NGAET 427
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+ L +F+++ +KP+ T S+L C+ + LE+G +IH L + GF + V TAL+
Sbjct: 428 DVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALM 487
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KC E+A +F M + +I+W + +G+A++ + H+++ +F +ML +G RP+ +
Sbjct: 488 DMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAI 547
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKE-YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
V L S G++ +A+ + K ++ + LI+++ + IE+A K
Sbjct: 548 ALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIG--ASLIEVYAKCSSIEDANKVFK 605
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAML 597
M ++ + V WS IA HG E FY KP + ++L
Sbjct: 606 GMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNVTFISIL 655
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 188/372 (50%), Gaps = 23/372 (6%)
Query: 37 YQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEII 96
Y++SGS P +L F + V++E + VS+ C + +
Sbjct: 318 YEQSGS----------PELALAFFSRM-VVSEKVSPDPVTLVSVASACAQLSNFKLGRSV 366
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
H + + G + L+++YGK G+++ A +F + +++SW+++++ Y N
Sbjct: 367 HGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAE 426
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+ +F +ML+ P VT+ + L AC+ + ++ G +IH V Y E +T+V +L
Sbjct: 427 TDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTAL 486
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+Y C S A+ FNR+ +K+V++W + +NG + + F MLS G +P+
Sbjct: 487 MDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDA 546
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
L I + + L+ +H+ IK G+ +N + S++ +Y KC +++A K+F G
Sbjct: 547 IALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKG 606
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSIL 395
M++ ++VTW+++IA + H G EAL +F ++ N S KP+ TF SIL
Sbjct: 607 MTYKDVVTWSSIIAAYG-----------FHGQGEEALKLFYQMANHSDTKPNNVTFISIL 655
Query: 396 TICSRLVALEQG 407
+ CS +++G
Sbjct: 656 SACSHSGLIKEG 667
>gi|115483184|ref|NP_001065185.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|78708963|gb|ABB47938.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113639794|dbj|BAF27099.1| Os10g0540100 [Oryza sativa Japonica Group]
gi|125575555|gb|EAZ16839.1| hypothetical protein OsJ_32311 [Oryza sativa Japonica Group]
gi|215704329|dbj|BAG93763.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 681
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/611 (32%), Positives = 330/611 (54%), Gaps = 20/611 (3%)
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ + P A+ VF + A P + T AL+AC+ L +R G+ + +DD
Sbjct: 84 HSRRGSPASALRVFRALPPAAR-PDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDD 142
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
V +SL LY+ G++ A+K F R+ ++ ++W+T++ G+ + ++ + +M
Sbjct: 143 VFVCSSLLHLYARWGAMGDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMRE 202
Query: 270 EGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDE 329
+G++ +E + + C ++R+GA VH ++ G ++ S++ +Y K GL+D
Sbjct: 203 DGVKGDEVVMIGVIQACTAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDV 262
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSKLNSSGMKPDL 388
A ++F M H N V+W+AMI+G AQ NG + EAL +F + +SG++PD
Sbjct: 263 ACRVFGLMVHRNDVSWSAMISGFAQ------------NGQSDEALRLFRNMQASGIQPDS 310
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
S L CS + L+ G +H ++ F + ++GTA ++MY KCG + A +F
Sbjct: 311 GALVSALLACSNIGFLKLGRSVHGFIVRR-FDFNCILGTAAIDMYSKCGSLASAQMLFNM 369
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
+S R LI W +MI H AL LF++M G+RP+ TF L+A S++G+V E
Sbjct: 370 ISDRDLILWNAMIACCGAHGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEG 429
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+F M +KI P HY+CL+D+ R G +EEA D + M EP IW ++GC
Sbjct: 430 KLWFGRMVNHFKITPAEKHYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSGCL 489
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
+ +ELG A+ +L+L+P D A++ +++ + +W+ V V+ L ++ +
Sbjct: 490 NNKKLELGESIADNILELQPDDVGVLALVSNLYAATKKWDKVRQVRKLMKDSGSKKMPGC 549
Query: 629 SWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESA 683
S I I+ + F D HPQ EI + +L + + GY + F D +E
Sbjct: 550 SSIEIRGTRHVFVMEDQSHPQREEIVSKVAKLDLEMRKMGYIPRTEFVYHDLEEEVKEQQ 609
Query: 684 SVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHK 743
YHSE+LAIAFGLLNT + ++++K+ +C DCH+ IK I+ + REI+VRD+KR H
Sbjct: 610 LSYHSERLAIAFGLLNTGPGTRLVIIKNLRVCGDCHDAIKYISKIADREIVVRDAKRFHH 669
Query: 744 FVNGHCTCRDF 754
F +G C+CRD+
Sbjct: 670 FKDGVCSCRDY 680
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 232/460 (50%), Gaps = 26/460 (5%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
L + ++++ L C L E + G D FV + L+++Y + G M
Sbjct: 100 LPPAARPDSTTFTLALSACARLGDLRGGESVRDRAFDAGYKDDVFVCSSLLHLYARWGAM 159
Query: 126 EEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTAC 185
+A KVF +PR + V+W+++++G+V QP AI ++ M E G V + + AC
Sbjct: 160 GDAVKVFVRMPRRDRVTWSTMVAGFVSAGQPLDAIQMYRRMREDGVKGDEVVMIGVIQAC 219
Query: 186 SSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
++ ++R+G +H +++++ D SL +Y+ G L+ A + F + +N +SW+
Sbjct: 220 TAARNVRMGASVHGHLLRHGMRMDVVTATSLVDMYAKNGLLDVACRVFGLMVHRNDVSWS 279
Query: 246 TVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKL 305
+I +NG++ + LR F M + GIQP+ L S C + L++G VH ++
Sbjct: 280 AMISGFAQNGQSDEALRLFRNMQASGIQPDSGALVSALLACSNIGFLKLGRSVHGFIVRR 339
Query: 306 GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSA 365
+ N + + + +Y KCG + AQ LF+ +S +L+ WNAMIA A
Sbjct: 340 -FDFNCILGTAAIDMYSKCGSLASAQMLFNMISDRDLILWNAMIAC-----------CGA 387
Query: 366 HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
H G +AL++F ++N +GM+PD TF+S+L+ S +E+G+ + ++
Sbjct: 388 HGRGQDALTLFQEMNETGMRPDHATFASLLSALSHSGLVEEGKLWFGRMVNHFKITPAEK 447
Query: 426 G-TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDML-- 481
LV++ + G +E AS + M ++ W ++++G L+++ L+L E +
Sbjct: 448 HYVCLVDLLARSGLVEEASDLLTSMKAEPTVAIWVALLSG----CLNNKKLELGESIADN 503
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ ++P+ VG LA SN +Y A ++ +++ K+
Sbjct: 504 ILELQPDD---VGVLALVSN---LYAATKKWDKVRQVRKL 537
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 189/559 (33%), Positives = 314/559 (56%), Gaps = 14/559 (2%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T L+ Y G+ EEA +FD +P +V++WTS+I+GY + A +VF +ML G
Sbjct: 45 TDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT-SVGNSLCSLYSTC-GSLNSAI 230
P T+ L AC SL+++ GK +H +K T+ + V N+L +Y+TC S+++A
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNAR 164
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
F I KN +SWTT+I +A GLR F +M E + + F+ + S C ++
Sbjct: 165 LVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIG 224
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
S +G QVH+ I G+ SNL V N+I+ +Y +C EA++LF M+ + +TWN +IA
Sbjct: 225 SSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIA 284
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G + E+L IFS++ S G P+ +TF+S++ C+ L L G+Q+
Sbjct: 285 GFETL------------DSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQL 332
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H + G +++ + AL++MY KCG + + ++F M L+SWTSM+ G+ H
Sbjct: 333 HGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHG 392
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+A+ LF +M+ +G++P+++ F+ L+ACS+AG+V E L YF +M Y + P D Y C
Sbjct: 393 KEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYAC 452
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA++ I+ M F+P+E IW + C+++ + AA ++L++KP
Sbjct: 453 VVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNK 512
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L + + G W D A ++ L R K + SWI +K++V SF D +
Sbjct: 513 AGTYVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSN 572
Query: 651 AEIFKVLDELVEKAKCFGY 669
E+ +VL+ L+ K GY
Sbjct: 573 KEVCEVLELLIRHMKDAGY 591
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 187/377 (49%), Gaps = 28/377 (7%)
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
+ +D T + L Y GS A F+ + ++V++WT++I +
Sbjct: 35 FNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNV 94
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYL 322
F+ ML +G++PN FT++++ C ++ +L G VH L IK+G S++ V N++M +Y
Sbjct: 95 FTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYA 154
Query: 323 K-CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
C +D A+ +F+ + N V+W +I G+ D A G L +F ++
Sbjct: 155 TCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRD-------AFGG----LRVFRQMFM 203
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIER 441
+ ++FS ++ C+ + + G+Q+HA + GF S++ V A+++MY +C
Sbjct: 204 EEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASE 263
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A ++F EM+ + I+W ++I GF S+++L +F M+ G PN TF +AAC+N
Sbjct: 264 AKQLFGEMTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSEGFSPNCFTFTSVIAACAN 322
Query: 502 AGMVYEALGYFEMMQKEYK--IKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEP 555
++Y Q+ + I +D+ + LIDM+ + G + ++ M
Sbjct: 323 LAILYCG-------QQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMR-HT 374
Query: 556 NEVIWSVFIAGCRRHGN 572
N V W+ + G HG+
Sbjct: 375 NLVSWTSMMIGYGAHGH 391
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 141/281 (50%), Gaps = 2/281 (0%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G + + E ++ S+ + C + S + + +HA ++ G + VM +++
Sbjct: 194 GLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILD 253
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y +C EA+++F + + + ++W +LI+G+ E ++ +F M+ G P T
Sbjct: 254 MYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSYE-SLCIFSQMVSEGFSPNCFT 312
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ + AC++L + G+Q+H ++ +++ + N+L +Y+ CG++ + K F+ +R
Sbjct: 313 FTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMR 372
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
N++SWT+++ G +G + + F++M+ GI+P++ ++ S C + G +
Sbjct: 373 HTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLR 432
Query: 298 VHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
L A + + ++ L + G V EA +L + M
Sbjct: 433 YFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENM 473
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 8/192 (4%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++EG ++ S++ C N L + +H I+ G + + L+++Y KCGN
Sbjct: 301 MVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGN 360
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ ++ K+F + N+VSWTS++ GY + + A+ +F +M+ +G P + L+A
Sbjct: 361 VADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSA 420
Query: 185 CSSL----ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
CS E +R + + +Y Y D + + L S G + A + + K
Sbjct: 421 CSHAGLVDEGLRYFRLMTSY---YNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKP 477
Query: 241 VMS-WTTVIGAC 251
S W ++GAC
Sbjct: 478 DESIWVALLGAC 489
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 219/717 (30%), Positives = 367/717 (51%), Gaps = 32/717 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P S+ ++L++ KSL++ + +HAHI++T + F ++ N+ A
Sbjct: 8 PSFAVSAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYAL 67
Query: 130 KVFDNL-PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+F ++ P + + SL+ ++ +P I + + G ++ L A S +
Sbjct: 68 NLFSSISPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKV 127
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ G ++H + K T D V L +Y+ CG +N A F+ + +++V++W T+I
Sbjct: 128 SALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMI 187
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G + + F +M + P+E L +I S CG ++R ++ I+
Sbjct: 188 ERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVR 247
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA--------------- 353
+ + +++ +Y G +D A + F MS NL AM++G++
Sbjct: 248 MDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQT 307
Query: 354 QMMDLA--KDDLSAH---NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
+M DL +SA+ + EAL +F ++ SG+KPD+ T S+++ C L L++ +
Sbjct: 308 EMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAK 367
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
+H T G S + + AL+NMY KCG ++ A VF +M TR ++SW+SMI FA H
Sbjct: 368 WVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHG 427
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
+ +L LF M V PN+VTFVG L CS++G+V E F M EY I P ++HY
Sbjct: 428 EASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHY 487
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+F R + EA + I+ M PN VIW ++ CR HG +ELG AA+++LKL+P
Sbjct: 488 GCMVDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEP 547
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
+ ++ +I+ RW+ V +++ + ++K+ + S I + K + F D H
Sbjct: 548 DHDGALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHK 607
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPI- 702
QS EI+ L E+V K K GY L D E ++HSEKLA+ FGL+N
Sbjct: 608 QSNEIYTKLYEVVSKLKLAGYVPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKE 667
Query: 703 -----VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I +VK+ +C DCH F K+++ + EIIVRD R H++ +G C+CRD+
Sbjct: 668 EEKGSCGVIRIVKNLRVCEDCHAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDY 724
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 220/493 (44%), Gaps = 77/493 (15%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
S L L+ + EP ++ F + + + G + S+ +L+ +L +H
Sbjct: 84 SLLRDLSRSGEPRATILFYQRIRHV--GGRFDRISFPPILKAVSKVSALFEGMELHGFAF 141
Query: 102 KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
K + D FV T L+++Y CG + A+ VFD + + +VV+W ++I Y + + A
Sbjct: 142 KIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFK 201
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS---------- 211
+F +M ++ P + L ++AC ++R + I+ ++++ DT
Sbjct: 202 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYA 261
Query: 212 ---------------------VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
V ++ S YS G L+ A F++ K+++ WTT+I A
Sbjct: 262 GAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISA 321
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
E+ + LR F +M GI+P+ T+ S+ S C + +L VH G S
Sbjct: 322 YAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESV 381
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
L + N+++ +Y KCG +D A+ +F+ M N+V+W++MI A H +
Sbjct: 382 LPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAM-----------HGEAS 430
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
++LS+F+++ ++P+ TF +L CS +E+G++I A ++
Sbjct: 431 DSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA---------------SMT 475
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+ Y +IE + M+ F +L +AL++ E M +A PN V
Sbjct: 476 DEYNITPKIEH---------------YGCMVDLFGRANLLREALEVIESMPMA---PNVV 517
Query: 491 TFVGALAACSNAG 503
+ ++AC G
Sbjct: 518 IWGSLMSACRVHG 530
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 200/667 (29%), Positives = 343/667 (51%), Gaps = 48/667 (7%)
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A +F ++P L+ + + PE + ++L + G + L A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 185 CSSLESIRLGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
S L ++ LG +IH K+ D + ++L ++Y+ CG + A F+++ ++V++
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +I +N L+ + +M + G +P+ L ++ S C +L G +H
Sbjct: 185 WNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIK 244
Query: 304 KLGYASNLRVRNSIMYLYLKCG-------------------------------LVDEAQK 332
G+ ++ S++ +Y CG +V +A+
Sbjct: 245 DNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARF 304
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
+FD M +LV W+AMI+G+A+ EAL +F+++ + PD T
Sbjct: 305 IFDRMVEKDLVCWSAMISGYAESYQ-----------PLEALQLFNEMQRRRIVPDQITML 353
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+++ C+ + AL Q + IH K GF + + AL++MY KCG + +A VF M +
Sbjct: 354 SVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRK 413
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
+ISW+SMI FA H + A+ LF M + PN VTF+G L ACS+AG+V E +F
Sbjct: 414 NVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFF 473
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M E++I P +HY C++D++ R + +A + I+ M F PN +IW ++ C+ HG
Sbjct: 474 SSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGE 533
Query: 573 MELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIR 632
+ELG +AA +LL+L+P + +L +I+ RW+DV +V+ L + + +S+ S I
Sbjct: 534 IELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIE 593
Query: 633 IKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYH 687
+ ++V+ F D H QS EI+K LD +V + K GY S L D ++ ++H
Sbjct: 594 VNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWH 653
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
SEKLA+ +GL+ S I +VK+ +C DCH+F+K+++ + EI++RD R H F G
Sbjct: 654 SEKLALCYGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGG 713
Query: 748 HCTCRDF 754
C+CRD+
Sbjct: 714 ICSCRDY 720
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 174/416 (41%), Gaps = 56/416 (13%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
T G + ++L C + +LS + IH I G + T LVN+Y CG M
Sbjct: 210 TSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMH 269
Query: 127 EAQKVFDNLP-------------------------------RINVVSWTSLISGYVQNSQ 155
A++V+D LP ++V W+++ISGY ++ Q
Sbjct: 270 LAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQ 329
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
P A+ +F +M P +T+ + ++AC+++ ++ K IH Y K + N+
Sbjct: 330 PLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNA 389
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ CG+L A + F + KNV+SW+++I A +G+A + F +M + I+PN
Sbjct: 390 LIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPN 449
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY-LYLKCGLVDEAQKLF 334
T + C + G + S I S R M LY + + +A +L
Sbjct: 450 GVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELI 509
Query: 335 DGMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
+ M N++ W ++++ + N G L F+ ++PD
Sbjct: 510 ETMPFPPNVIIWGSLMS-------------ACQNHGEIELGEFAATRLLELEPD---HDG 553
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
L + S + A E+ L K ++ V+ K C RIE + V V M
Sbjct: 554 ALVVLSNIYAKEKRWDDVGLVRK-------LMKHKGVSKEKACSRIEVNNEVHVFM 602
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 323/600 (53%), Gaps = 32/600 (5%)
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
S++ K +HA +++ ++D+ + N + G+ N + + F++ +E N+ + T
Sbjct: 19 GFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNT 78
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I N + + + M EG+ P+ FT + C +L ++G ++H L +K G
Sbjct: 79 MIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAG 138
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH------AQMMD--- 357
S+ V S++ LY KCG +D A K+FD + N+ W A+I+G+ + +D
Sbjct: 139 CESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFR 198
Query: 358 ---------LAKDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICS 399
L KD +S A NG EAL +F K+ + G +PD Y +L C+
Sbjct: 199 RACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACA 258
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
RL ALE G L + FL + V+GTAL++MY KCGR++ A VF M + ++ W +
Sbjct: 259 RLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNA 318
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
I+G A A LF M +G+ P+ TFVG L AC++AG+V E YF M++ +
Sbjct: 319 AISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVF 378
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
+ P ++HY C++D+ R G ++EA +K M E N ++W + GCR H + +L
Sbjct: 379 TLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGV 438
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
+QL+ L+P + +Y +L +I+ ++ +WED A ++++ E + + +SWI + V+
Sbjct: 439 LKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHE 498
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--EESASVY---HSEKLAIA 694
F D HP S +I+ L ELV+ K GY + L D EE + HSEKLAIA
Sbjct: 499 FLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIA 558
Query: 695 FGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
FGL++T I VVK+ +C DCH IK I+ T REIIVRD+ R H F +G C+C+D+
Sbjct: 559 FGLISTAPNDKIRVVKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDY 618
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 213/478 (44%), Gaps = 57/478 (11%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
SL + + +HA +++ G +D +++ ++ GN + ++F N+ + ++I
Sbjct: 22 SLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIH 81
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
G V N + +I ++ M + G P + T L AC+ L +LG ++H VVK E
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCES 141
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI------GACGE--------- 253
D V SL SLY CG +++A K F+ I EKNV +WT +I G C E
Sbjct: 142 DAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRAC 201
Query: 254 -----------------------NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
NG + L F KML+EG +P+ + + + C +
Sbjct: 202 SVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLG 261
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+L +G +L + + N + +++ +Y KCG +D A ++F GM ++V WNA I+
Sbjct: 262 ALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAIS 321
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ- 409
G A +S H A +F ++ SG++PD TF +L C+ +++G Q
Sbjct: 322 GLA---------MSGHV--KAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQY 370
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS 468
+++ ++ +V++ + G ++ A ++ M I W +++ G
Sbjct: 371 FNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG----C 426
Query: 469 LSHQALQLFEDML--LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
H+ QL E +L L + P+ L+ +A +E + E IK V
Sbjct: 427 RLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKV 484
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 145/337 (43%), Gaps = 44/337 (13%)
Query: 59 FQEAL----SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
FQE++ S+ EG + ++ LL+ C +H +VK G D FV T
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTS 148
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV----------------------- 151
LV++YGKCG ++ A KVFD++P NV +WT++ISGY+
Sbjct: 149 LVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGML 208
Query: 152 ---------------QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
N P+ A+ +F ML G P + L AC+ L ++ LG
Sbjct: 209 EKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNW 268
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
+ + + + +G +L +Y+ CG ++SA + F +R+K+++ W I +G
Sbjct: 269 ASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGH 328
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRN 315
F +M GI+P+ T + C + G Q +S+ +
Sbjct: 329 VKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYG 388
Query: 316 SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
++ L + G +DEA +L M N + W A++ G
Sbjct: 389 CMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 208/700 (29%), Positives = 352/700 (50%), Gaps = 40/700 (5%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A S+ P+ SY +LL SL++A + + +D +++ +
Sbjct: 88 AASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPV----RDSVTYNVMISSHAN 143
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G + A+ FD P + VSW +++ YV+N + E A +F E N +
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGY 203
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ E+ L ++ D N + S Y+ G + A + F+ ++V
Sbjct: 204 VQWGKMSEARELFDRMPG--------RDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV 255
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+WT V+ +NG + R F M E S +++ + R+ + L
Sbjct: 256 FTWTAVVSGYAQNGMLEEARRVFDAM-------PERNAVSWNAMVAAYIQRRMMDEAKEL 308
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+ N+ N+++ Y + G+++EA+ +FD M + V+W AM+A ++Q
Sbjct: 309 -FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ------- 360
Query: 362 DLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
GG E L +F ++ G + F+ +L+ C+ + ALE G Q+H ++ G+
Sbjct: 361 ------GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGY 414
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
VG AL+ MY KCG +E A F EM R ++SW +MI G+A H +AL++F+
Sbjct: 415 GVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDM 474
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M +P+ +T VG LAACS++G+V + + YF M ++ + +HY C+ID+ R G
Sbjct: 475 MRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAG 534
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
+ EA D +K M FEP+ +W + R H N ELG AAE++ +L+P++ Y +L +
Sbjct: 535 RLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSN 594
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
I+ S+G+W D ++ + E + + +SWI +++KV++F D +HP+ +I+ L++
Sbjct: 595 IYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLED 654
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L + K GY L D +E YHSEKLA+A+G+LN P PI V+K+ +
Sbjct: 655 LDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRV 714
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHN K I+++ R I++RDS R H F G C+C D+
Sbjct: 715 CGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDY 754
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+E L + E G V S++ +L C + +L +H +++ G FV L
Sbjct: 365 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCGNME+A+ F+ + +VVSW ++I+GY ++ + A+ +F M P +
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 176 VTLGTALTACS 186
+TL L ACS
Sbjct: 485 ITLVGVLAACS 495
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 65/300 (21%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N + +++ G V +A++LF M + T+NAM+AG+ SA+ A S
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGY-----------SANGRLPLAAS 90
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F + +PD Y+++++L HAL + + L+D
Sbjct: 91 LFRAIP----RPDNYSYNTLL---------------HALAVSSS-LAD------------ 118
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
A +F EM R +++ MI+ ANH L A F+ LA + + V++ G
Sbjct: 119 -------ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD---LAPEK-DAVSWNG 167
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
LAA G V EA G F + I + L+ +V+ G + EA + +M
Sbjct: 168 MLAAYVRNGRVEEARGLFNSRTEWDAIS-----WNALMSGYVQWGKMSEARELFDRMPGR 222
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVV 613
+ V W++ ++G R G+M A +L P +D ++ ++ + G E+ V
Sbjct: 223 -DVVSWNIMVSGYARRGDM----VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 277
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ + + + GR+ A R+F M R+ ++ +M+ G++ ++ L L +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYS----ANGRLPLAASLF 92
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH--YMCLIDMFVRLG 539
A RP+ ++ L A + + + +A G F+ M PV D Y +I G
Sbjct: 93 RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEM-------PVRDSVTYNVMISSHANHG 145
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ A + + E + V W+ +A R+G +E
Sbjct: 146 LVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVE 179
>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 650
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 223/689 (32%), Positives = 363/689 (52%), Gaps = 58/689 (8%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC-----GNMEEAQK 130
S +SLL++C KS+ + IH+H +K G D F V C GNM A +
Sbjct: 9 SPISLLEKC---KSMYQLKQIHSHTIKMGLSSDPL---FRNRVIAFCCAHESGNMNYAHQ 62
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P ++ W ++I GY + S PE + ++L ML + P T +L + +
Sbjct: 63 VFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMA 122
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
++ GK++ + VK+ + + V + ++S CG ++ A K F+ V++W ++
Sbjct: 123 LQHGKELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLS- 181
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G N V+ + SKML + S C + L G + Y +
Sbjct: 182 -GYN--RVKQFKI-SKMLL------------VLSACSKLKDLEWGKHI------FKYING 219
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
V +++ CG +DEAQ +FD M ++V+W AMI G+ +M N
Sbjct: 220 GIVE----HMFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRM-----------NHFI 264
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
AL++F ++ S +KPD +T SIL C+ L ALE GE + K +D VG ALV
Sbjct: 265 GALALFREMQMSNVKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALV 324
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG + +A +VF EM + +WT+MI G A + +AL +F +M+ A V P+++
Sbjct: 325 DMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEI 384
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
T++G L AC MV + +F M ++ IKP + HY C++D+ +GC+EEA + I
Sbjct: 385 TYIGVLCAC----MVDKGKSFFTNMTMQHGIKPTVTHYGCMVDLLGCVGCLEEALEVIVN 440
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M +PN ++W + CR H N++L AA+Q+L+L+P++ Y +L +I+ ++ +WE++
Sbjct: 441 MPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEPENGAVYVLLCNIYAASKKWENL 500
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK 670
V+ L E + +T S + + VY F D HPQS EI+ L+ +++ GY
Sbjct: 501 CQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQGLIKAGYS 560
Query: 671 QQES---FEL--TDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKII 725
S +L D+E+A HSEKLAIA+ L+++ I +VK+ MC DCH+ K++
Sbjct: 561 PDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGVTIRIVKNLRMCVDCHHMAKLV 620
Query: 726 TSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ RE+IV+D R H F +G C+C +F
Sbjct: 621 SQAYNRELIVKDKTRFHHFRHGSCSCNNF 649
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 184/404 (45%), Gaps = 44/404 (10%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G L +LT K ++ L+ +L + + + H VK G + FV ++
Sbjct: 91 GVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLFVQKAFIH 150
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
++ CG ++ A KVFD VV+W ++SGY + Q +++ + +
Sbjct: 151 MFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQFKISKMLLV------------- 197
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L+ACS L+ + GK I Y+ G + +++ CG ++ A F+ ++
Sbjct: 198 ----LSACSKLKDLEWGKHIFKYI----------NGGIVEHMFAACGEMDEAQGVFDNMK 243
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
++V+SWT +I + L F +M ++P+EFT+ SI C + +L +G
Sbjct: 244 TRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEW 303
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
V + K ++ V N+++ +Y KCG V +A+K+F M + TW MI G
Sbjct: 304 VKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVG------ 357
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLK 416
L+ + G EAL++FS + + + PD T+ +L C +++G+ +T++
Sbjct: 358 -----LAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQ 408
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTS 459
G V +V++ G +E A V V M + I W S
Sbjct: 409 HGIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGS 452
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/622 (33%), Positives = 349/622 (56%), Gaps = 22/622 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH--QDFFVMTFL 115
F+ +++ G + S+V++ NA +++ +VK GS DFFV++
Sbjct: 202 AFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSA 261
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP-T 174
+ +Y + G ++ A+++FD N W ++I GYVQN+ P AI +F+ ++E+ +
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLD 321
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+VT +ALTA S L+ + LG+Q+HAY++K T + N++ +YS CGS+ ++ K F+
Sbjct: 322 DVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ E++V++W T++ A +NG +GL +M +G + TLT++ S+ + S +
Sbjct: 382 NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEI 441
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL--VTWNAMIAGH 352
G Q H+ I+ G + ++ +Y K GL+ AQ+LF+ S + TWNAMIAG+
Sbjct: 442 GKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGY 500
Query: 353 AQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
Q NG E ++F K+ ++P+ T +SIL C+ + + G+QIH
Sbjct: 501 TQ------------NGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIH 548
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
++ +V VGTAL++MY K G I A VF E + +++T+MI + H +
Sbjct: 549 GFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGE 608
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL LF ML +G++P+ VTFV L+ACS AG+V E L F+ M++EYKI+P +HY C+
Sbjct: 609 RALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCV 668
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKL-KPK 589
DM R+G + EA++F+K + E N IW + CR HG ELG A +LL++ K
Sbjct: 669 ADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGS 728
Query: 590 DCESYAMLL-DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
Y +LL +I+ + G W++V V+ R++ L + SW+ + V F D HP
Sbjct: 729 XLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHP 788
Query: 649 QSAEIFKVLDELVEKAKCFGYK 670
Q AEI+++L++L + K GYK
Sbjct: 789 QCAEIYQMLEKLAMEMKDAGYK 810
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 238/485 (49%), Gaps = 39/485 (8%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT--NVTLGT 180
G+ +A +FD++PR V W ++I G++ N+ P A+ +F + A P + T +
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSS 109
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS----LNSAI------ 230
L AC+ S++LGK +H +V++ V NSL ++YSTC + L +A
Sbjct: 110 TLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCD 169
Query: 231 ---KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
+ F+ +R++NV++W T+I + ++ + F M+ GI+P + ++
Sbjct: 170 LVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVW 229
Query: 288 TMLSLRVGAQVHSLGIKLG--YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
M ++ L +KLG Y + V +S +++Y + G VD A+++FD N W
Sbjct: 230 RMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVAL 404
N MI G+ Q +N EA+ +F + + S D TF S LT S+L L
Sbjct: 290 NTMIGGYVQ-----------NNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWL 338
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ G Q+HA LK+ + VV+ A++ MY +CG I + +VF M R +++W +M++ F
Sbjct: 339 DLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAF 398
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN---AGMVYEALGYFEMMQKEYKI 521
+ L + L L +M G + VT L+ SN + +A Y +++
Sbjct: 399 VQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFE- 457
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
MD Y LIDM+ + G I A F K ++ +E W+ IAG ++G E GF
Sbjct: 458 --GMDGY--LIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVF 513
Query: 581 EQLLK 585
++++
Sbjct: 514 RKMIE 518
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 153/603 (25%), Positives = 280/603 (46%), Gaps = 45/603 (7%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N+ P+ +L F + + PK + ++ S L+ C +SL + +H H++++
Sbjct: 81 NNMPIDALLFYARMRA-SPSPKFDSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSR 139
Query: 110 FVMTFLVNVYGKC-------------GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
V L+N+Y C N + ++VFD + + NVV+W ++IS YV+ +
Sbjct: 140 IVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERL 199
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE--DDTSVGN 214
A +F M+ G PT V+ A + ++ VVK ++ DD V +
Sbjct: 200 IEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVS 259
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML-SEGIQ 273
S +Y+ G ++ A + F+ E+N W T+IG +N ++ + F +++ SE
Sbjct: 260 SAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFX 319
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
++ T S + + L +G Q+H+ +K + + N+I+ +Y +CG + + K+
Sbjct: 320 LDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKV 379
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M ++VTWN M++ Q DD E L + ++ G D T ++
Sbjct: 380 FSNMLERDVVTWNTMVSAFVQN---GLDD--------EGLMLVFEMQKQGFMVDSVTLTA 428
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-- 451
+L++ S L + E G+Q HA ++ G + + G L++MY K G I A ++F + S
Sbjct: 429 LLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGLITTAQQLFEKNSXYD 487
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R +W +MI G+ + LS + +F M+ VRPN VT L AC+ G + LG
Sbjct: 488 RDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTI--GLG- 544
Query: 512 FEMMQKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
+ I+ ++ + L+DM+ + G I A + + E N V ++ I
Sbjct: 545 --KQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAE-TLEKNSVTYTTMILSY 601
Query: 568 RRHGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW-EDVAVVKNLTREEKLSE 624
+HG E L + A +KP D ++ +L AG E + + +++ RE K+
Sbjct: 602 GQHGMGERALSLFHAMLGSGIKP-DSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQP 660
Query: 625 TDD 627
+ +
Sbjct: 661 SSE 663
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 13/227 (5%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG SE GF ++ + + + S+L C ++ + IH ++ +Q
Sbjct: 503 NGLSEE----GFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQ 558
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ FV T L+++Y K G + A+ VF N V++T++I Y Q+ E A+ +F ML
Sbjct: 559 NVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAML 618
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSL 226
+G P +VT L+ACS + G +I + + Y+ + + C + G +
Sbjct: 619 GSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSE---HYCCVADMLGRV 675
Query: 227 NSAIKAFNRIR----EKNVMS-WTTVIGACGENGEAVQGLRFFSKML 268
+A+ ++ E N W +++GAC +GE G +K+L
Sbjct: 676 GRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLL 722
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 205/652 (31%), Positives = 343/652 (52%), Gaps = 70/652 (10%)
Query: 167 LEAGNYP--TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
L+ N P T LG L L+++R +H+ ++ ++S+G L Y++
Sbjct: 33 LDQKNSPKETAFMLGQVLDTYPDLKTLR---TVHSRIISEDLRYNSSLGVKLMRAYASLK 89
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ +A K F+ I E+NV+ +I + NG +G++ F M S ++P+ +T +
Sbjct: 90 DVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLK 149
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
C ++ +G ++H K+G +S L V N ++ +Y KCG + EA+ + D MS ++V+
Sbjct: 150 ACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 209
Query: 345 WNAMIAGHA--QMMDLAKDDLS-------AHNGGT------------------------- 370
WN+++AG+A Q D A + +H+ GT
Sbjct: 210 WNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFK 269
Query: 371 -----------------------EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
EA+ ++S + + G +PD + +S+L C AL G
Sbjct: 270 MGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLG 329
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
++IH + + ++++ AL++MY KCG ++RA VF M +R ++SWT+MI+ +
Sbjct: 330 KKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFS 389
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
A+ LF M +G+ P+ + FV LAACS+AG++ E F++M YKI P ++H
Sbjct: 390 GRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 449
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
C++D+ R G ++EA+ FI++M EPNE +W + CR H N ++G AA++L +L
Sbjct: 450 LACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLA 509
Query: 588 PKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLH 647
P+ Y +L +I+ AGRWE+V ++N+ + + L + S + + +++F D H
Sbjct: 510 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 569
Query: 648 PQSAEIFKVLDELVEKAKCFGY-KQQES----FELTDEESASVYHSEKLAIAFGLLNTP- 701
PQSAEI++ LD LV+K K GY ES E D+E+ HSEKLAI F L+NT
Sbjct: 570 PQSAEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEE 629
Query: 702 --IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
+ I + K+ +C DCH K+I+ +T+REII+RD+ R H F G C+C
Sbjct: 630 EDSNNAIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSC 681
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 183/376 (48%), Gaps = 47/376 (12%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +L+ C ++ + IH K G FV LV++YGKCG + EA+ V D +
Sbjct: 143 TFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 202
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
R +VVSW SL++GY QN + F D LE C +ES+++
Sbjct: 203 SRRDVVSWNSLVAGYAQNQR-------FDDALE---------------VCREMESVKI-- 238
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK-AFNRIREKNVMSWTTVIGACGEN 254
+ D ++ + L ++ +T +K F ++ +K+++SW +IG +N
Sbjct: 239 ----------SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKN 288
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
V+ + +S M ++G +P+ ++TS+ CG +L +G ++H + NL +
Sbjct: 289 AMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 348
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N+++ +Y KCG +D A+ +F+ M ++V+W AMI+ + G +A++
Sbjct: 349 NALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYG-----------FSGRGCDAVA 397
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA-LVNMY 433
+FSK+ SG+ PD F + L CS LE+G L ++ + A +V++
Sbjct: 398 LFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLL 457
Query: 434 KKCGRIERASRVFVEM 449
+ G+++ A + EM
Sbjct: 458 GRAGKVKEAYKFIQEM 473
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N+ PV ++ + +G + S S+L C + +LS + IH +I + +
Sbjct: 288 NAMPVEAVELYSGMEA--DGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 345
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ L+++Y KCG ++ A+ VF+N+ +VVSWT++IS Y + + A+ +F M ++
Sbjct: 346 LLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDS 405
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNS 228
G P ++ T L ACS + G+ + Y+ + L G +
Sbjct: 406 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 465
Query: 229 AIKAFNRIR-EKNVMSWTTVIGAC 251
A K + E N W ++GAC
Sbjct: 466 AYKFIQEMPMEPNERVWGALLGAC 489
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 213/621 (34%), Positives = 345/621 (55%), Gaps = 30/621 (4%)
Query: 18 SRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSS- 76
S++ S+LA+L K + Q K+IQ +S EA+ VL + S+
Sbjct: 7 SQRHYSTLASLNLKTLE-NPQSKAYKIIQY------CKSGSLFEAIHVLNSIDWTRLSNK 59
Query: 77 ---YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQKVF 132
Y SLLQ C S ++ H+H +K+G D FV L+ +Y K G N+ EA++VF
Sbjct: 60 PFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVF 119
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
D L +++SWTS+I+GYV+ +P+ ++ +FL+ML G P TL + ACS L +R
Sbjct: 120 DGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLR 179
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
LGK H V+ + + + +L +Y +++ AI F + + + + WT++I A
Sbjct: 180 LGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFT 239
Query: 253 ENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
N + L FF M + G+ P+ FT ++ + CG + L+ G +VH+ I G + N+
Sbjct: 240 RNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNV 299
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
V +S++ +Y KC LV+++Q +FD MS NLV+W A++ G+ Q NG E
Sbjct: 300 FVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQ------------NGDFE 347
Query: 372 A-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+ + IF + G K D Y+F ++L C+ L A+ QG+++H +K DVV +ALV
Sbjct: 348 SVIRIFRE----GKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALV 403
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
++Y KCG I+ A R+FV MS R LI+W SMI GFA + + QLF++M+ G+RP+ +
Sbjct: 404 DLYAKCGCIDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYI 463
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
+FVG L ACS+AG+V + YF M + Y+IKP ++HY C+ID+ R G +EEA + I+
Sbjct: 464 SFVGVLFACSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIEN 523
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
+ +W+V + C + A++ ++LKP SY L +++ + GRW+D
Sbjct: 524 ANCRDEPSLWTVLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDA 583
Query: 611 AVVKNLTREEKLSETDDWSWI 631
++NL + + + SWI
Sbjct: 584 VKIRNLMTKRGVGKMPGTSWI 604
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 355/701 (50%), Gaps = 42/701 (5%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A S+ P+ SY +LL SL++A + + +D +++ +
Sbjct: 88 AASLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPV----RDSVTYNVMISSHAN 143
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G + A+ FD P + VSW +++ YV+N + E A +F E +V A
Sbjct: 144 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTE-----WDVISWNA 198
Query: 182 LTACSSLESIRLGKQIHAY-VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L + ++ GK A + D N + S Y+ G + A + F+ ++
Sbjct: 199 LMSGY----VQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRD 254
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V +WT V+ +NG + R F M E S +++ + R+ +
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAM-------PERNAVSWNAMVAAYIQRRMMDEAKE 307
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L + N+ N+++ Y + G+++EA+ +FD M + V+W AM+A ++Q
Sbjct: 308 L-FNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQ------ 360
Query: 361 DDLSAHNGG--TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
GG E L +F ++ G + F+ +L+ C+ + ALE G Q+H ++ G
Sbjct: 361 -------GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAG 413
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
+ VG AL+ MY KCG +E A F EM R ++SW +MI G+A H +AL++F+
Sbjct: 414 YGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFD 473
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M +P+ +T VG LAACS++G+V + + YF M ++ + +HY C+ID+ R
Sbjct: 474 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRA 533
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G + EA D +K M FEP+ +W + R H N ELG AAE++ +L+P++ Y +L
Sbjct: 534 GRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLS 593
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+I+ S+G+W D ++ + E + + +SWI +++KV++F D +HP+ +I+ L+
Sbjct: 594 NIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLE 653
Query: 659 ELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTT 713
+L + K GY L D +E YHSEKLA+A+G+LN P PI V+K+
Sbjct: 654 DLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLR 713
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCHN K I+++ R I++RDS R H F G C+C D+
Sbjct: 714 VCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDY 754
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+E L + E G V S++ +L C + +L +H +++ G FV L
Sbjct: 365 EETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNAL 424
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y KCGNME+A+ F+ + +VVSW ++I+GY ++ + A+ +F M P +
Sbjct: 425 LAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDD 484
Query: 176 VTLGTALTACS 186
+TL L ACS
Sbjct: 485 ITLVGVLAACS 495
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 65/300 (21%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N + +++ G V +A++LF M + T+NAM+AG+ SA+ A S
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGY-----------SANGRLPLAAS 90
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F + +PD Y+++++L HAL + + L+D
Sbjct: 91 LFRAIP----RPDNYSYNTLL---------------HALAVSSS-LAD------------ 118
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
A +F EM R +++ MI+ ANH L A F+ LA + + V++ G
Sbjct: 119 -------ARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHYFD---LAPEK-DAVSWNG 167
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
LAA G V EA G F + E+ + + L+ +V+ G + EA + +M
Sbjct: 168 MLAAYVRNGRVEEARGLFN-SRTEWDVIS----WNALMSGYVQWGKMSEARELFDRMPGR 222
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP-KDCESYAMLLDIFVSAGRWEDVAVV 613
+ V W++ ++G R G+M A +L P +D ++ ++ + G E+ V
Sbjct: 223 -DVVSWNIMVSGYARRGDM----VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRV 277
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ + + + GR+ A R+F M R+ ++ +M+ G++ ++ L L +
Sbjct: 37 EVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYS----ANGRLPLAASLF 92
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH--YMCLIDMFVRLG 539
A RP+ ++ L A + + + +A G F+ M PV D Y +I G
Sbjct: 93 RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEM-------PVRDSVTYNVMISSHANHG 145
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME 574
+ A + + E + V W+ +A R+G +E
Sbjct: 146 LVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVE 179
>gi|356534396|ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/587 (33%), Positives = 327/587 (55%), Gaps = 26/587 (4%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ S G+ HA +++ E D L ++YS C ++S K + + K++
Sbjct: 57 LQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKSL 116
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ T IGA +N E + L+ +M E NEFT++S+ C ++ Q+H+
Sbjct: 117 ILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHAF 176
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK SN V +++++Y KC + +A ++F+ M N VTW++M+AG+ Q
Sbjct: 177 SIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQ------- 229
Query: 362 DLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
NG EAL +F G D + SS ++ C+ L L +G+Q+HA++ K+GF
Sbjct: 230 -----NGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFG 284
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVE-MSTRTLISWTSMITGFANHSLSHQALQLFED 479
S++ V ++L++MY KCG I A VF + R+++ W +MI+GFA H+L+ +A+ LFE
Sbjct: 285 SNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALAQEAMILFEK 344
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M G P+ VT+V L ACS+ G+ E YF++M +++ + P + HY C+ID+ R G
Sbjct: 345 MQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAG 404
Query: 540 CIEEAFDFIKKMDFEPNEVIWS-------VFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+++A+D I +M F +W + A CR +GN+E AA+ L +++P +
Sbjct: 405 LVQKAYDLIGRMSFNATSSMWGSVRGLSXLIKASCRIYGNIEFAEIAAKHLFEMEPNNAG 464
Query: 593 SYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAE 652
++ +L +I+ + + ++VA + L RE + + SWI IK+K++SF + HPQ +
Sbjct: 465 NHILLANIYAANKKSDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDD 524
Query: 653 IFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIVSPIL 707
+ LD LV + K YK + +L D E + +HSEKLAI FGL+ P PI
Sbjct: 525 NYAKLDNLVVELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKLAITFGLVCLPTEIPIR 584
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++K+ +C DCH F+K+++ +REIIVRD+ R H F +G C+C +F
Sbjct: 585 IIKNLRICGDCHTFMKLVSKFASREIIVRDTNRFHHFKDGLCSCGEF 631
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 187/388 (48%), Gaps = 13/388 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
LLQ C S HA I++ G D T L+N+Y KC + +K D + +
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
++ + I QN++ A+ + + M T+ + L C+ +I Q+HA
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILECMQLHA 175
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
+ +K + + V +L +Y+ C S+ A + F + EKN ++W++++ +NG +
Sbjct: 176 FSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHDE 235
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L F G + F ++S S C + +L G QVH++ K G+ SN+ V +S++
Sbjct: 236 ALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVHAMSHKSGFGSNIYVASSLID 295
Query: 320 LYLKCGLVDEAQKLFDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG + EA +F+G V ++V WNAMI+G A+ H EA+ +F K
Sbjct: 296 MYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFAR-----------HALAQEAMILFEK 344
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALVNMYKKCG 437
+ G PD T+ S+L CS + E+G++ L ++ LS V+ + ++++ + G
Sbjct: 345 MQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAG 404
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFA 465
+++A + MS S + G +
Sbjct: 405 LVQKAYDLIGRMSFNATSSMWGSVRGLS 432
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 131/262 (50%), Gaps = 2/262 (0%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C + ++ +HA +K + FV T L++VY KC ++++A ++F+++P
Sbjct: 156 SVLCNCAFKCAILECMQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMPEK 215
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
N V+W+S+++GYVQN + A+ +F + G + +A++AC+ L ++ GKQ+H
Sbjct: 216 NAVTWSSMMAGYVQNGFHDEALLLFHNAQLMGFDQDPFNISSAVSACAGLATLVEGKQVH 275
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEA 257
A K + V +SL +Y+ CG + A F E ++++ W +I + A
Sbjct: 276 AMSHKSGFGSNIYVASSLIDMYAKCGCIREAYLVFEGFVEVRSIVLWNAMISGFARHALA 335
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ + F KM G P++ T S+ + C M G + L ++ S + S
Sbjct: 336 QEAMILFEKMQQRGFFPDDVTYVSVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSC 395
Query: 318 MYLYL-KCGLVDEAQKLFDGMS 338
M L + GLV +A L MS
Sbjct: 396 MIDILGRAGLVQKAYDLIGRMS 417
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 10/182 (5%)
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L +C++ + G HA ++ G D++ T L+NMY KC + + EM ++
Sbjct: 56 LLQLCAKTGSSMGGRACHAQIIRIGLEMDILTSTMLINMYSKCSLVHSTRKKXDEMLVKS 115
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
LI + I ++ +AL+L M N+ T L C+ + E
Sbjct: 116 LILXNTRIGALTQNAEDRKALKLLIRMQREVTPFNEFTISSVLCNCAFKCAILEC----- 170
Query: 514 MMQKEYKIKPVMDH----YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
M + IK +D L+ ++ + I++A + M E N V WS +AG +
Sbjct: 171 MQLHAFSIKAAIDSNCFVXTALLHVYAKCSSIKDASQMFESMP-EKNAVTWSSMMAGYVQ 229
Query: 570 HG 571
+G
Sbjct: 230 NG 231
>gi|357509743|ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360204|gb|ABN08217.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355500175|gb|AES81378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 198/590 (33%), Positives = 326/590 (55%), Gaps = 20/590 (3%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P L L + + S+ G Q+HA+++K + + + L + YS S+++
Sbjct: 18 PLYRNLCNTLLSLTFSRSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQI 77
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSL 292
F+ K+ +W++VI + +N + L +F ML +G+ P++ S + CG + SL
Sbjct: 78 FHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSL 137
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGH 352
V +H +K Y ++ V +S++ +Y KCG + A +FD M + N+V+W+ +I G+
Sbjct: 138 PVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGY 197
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSK--LNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
Q L +DD E+L +F + + + +T SS+L +C L+ G I
Sbjct: 198 VQ---LGEDD--------ESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLI 246
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H L+ KT F S V ++L+++Y KCG +E A VF E++ R L W +M+ A H+ +
Sbjct: 247 HGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHT 306
Query: 471 HQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+ +LF+ M + G++ N +TF+ L ACS+AG+V + YFE+M K+Y I+P HY
Sbjct: 307 DKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELM-KDYGIEPGTQHYS 365
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
++D+ R G + +A I++M EP E +W + GCR HGN +L Y A+++ +L
Sbjct: 366 TMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSV 425
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
+ ML + + +AGRWE+ A + + R+ + + SW+ +++++F D H +
Sbjct: 426 SSGLHVMLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAK 485
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELT----DEESASV-YHSEKLAIAFGLLNTPIVS 704
S EI+ LDEL E+ GY SF L +E+S S+ YHSE+LAIAFG + P
Sbjct: 486 SVEIYDKLDELGEEMDKAGYVADTSFVLKEVDGEEKSRSIRYHSERLAIAFGFITFPHGQ 545
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+ +C DCH IK I+ T R IIVRD+ R H+F +G CTC D+
Sbjct: 546 PIRVMKNLRVCGDCHTAIKFISKCTGRVIIVRDNNRFHRFEDGKCTCGDY 595
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 219/445 (49%), Gaps = 37/445 (8%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLI 147
+SL +HAHI+K G + L+N Y K + ++F + P + +W+S+I
Sbjct: 34 RSLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVI 93
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
S + QN P L+++ F ML G P + +A +C L S+ + K +H + +K
Sbjct: 94 SSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYH 153
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D VG+S+ +Y+ CG + A F+ + +NV+SW+ +I + GE + LR F +
Sbjct: 154 LDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRF 213
Query: 268 L----SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
L +EG+ N+FTL+S+ VCG L++G +H L K + S+ V +S++ LY K
Sbjct: 214 LVEEENEGV--NDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSK 271
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS-S 382
CG+V+EA +F+ ++ NL WNAM+ AQ H + +F K+ S
Sbjct: 272 CGVVEEAYDVFEEVTVRNLGMWNAMLIACAQ-----------HAHTDKTFELFDKMKSVG 320
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
GMK + TF +L CS +E+G+ L G + +V++ + G++ A
Sbjct: 321 GMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDA 380
Query: 443 SRVFVEMSTRTLIS-WTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA--- 498
++ EM S W +++TG +L + LA ++V+ +G++++
Sbjct: 381 VKLIEEMPMEPTESVWGALLTG----------CRLHGNTKLASYVADRVSELGSVSSGLH 430
Query: 499 --CSNAGMVYEALGYFEMMQKEYKI 521
SNA Y A G +E K K+
Sbjct: 431 VMLSNA---YAAAGRWEEAAKARKM 452
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 159/355 (44%), Gaps = 7/355 (1%)
Query: 1 MASVPWAAAAACTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQ 60
+ ++P + +K+ P SSL D H + S S + N P+ SL +
Sbjct: 51 LQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWS-SVISSFAQNDLPLLSLNYF 109
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYG 120
+ L +G + S + C SL A+++H +KT H D FV + ++++Y
Sbjct: 110 RLM--LRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYA 167
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTL 178
KCG++ A VFD +P NVVSW+ LI GYVQ + + ++ +F L E + TL
Sbjct: 168 KCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTL 227
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
+ L C +++G+ IH K + V +SL SLYS CG + A F +
Sbjct: 228 SSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTV 287
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+N+ W ++ AC ++ + F KM S G++ N T + C + G
Sbjct: 288 RNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLYACSHAGLVEKGKY 347
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
L G + ++++ L + G +++A KL + M W A++ G
Sbjct: 348 YFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTESVWGALLTG 402
>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/572 (33%), Positives = 310/572 (54%), Gaps = 20/572 (3%)
Query: 91 SNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGY 150
S E +H+ V+ G D ++ + L+ +Y +CG+M A++VF + +VV +TSL+S
Sbjct: 127 SLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSAL 186
Query: 151 VQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDT 210
+N A+ V M+ G P T+ + L C + +G+QIH Y++K
Sbjct: 187 CRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSV 242
Query: 211 SVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE 270
+L YS G + A F + KNV+SW +++ C +G LR FS+M+SE
Sbjct: 243 YASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISE 302
Query: 271 GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEA 330
++PNEF + CG S+ +G Q+H IK +++RV N+++ +Y + G V E
Sbjct: 303 AVEPNEFAFSIALGACG---SVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEV 359
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLY 389
+ + + + +LV+W A I+ + Q NG +E A+++ +++S G P+ Y
Sbjct: 360 EAVLGKIENPDLVSWTAAISANFQ------------NGFSEKAVALLLQMHSEGFTPNDY 407
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
FSS L+ C+ L L+QG Q+H L LK G V G AL+NMY KCG+I A F M
Sbjct: 408 AFSSGLSSCADLALLDQGRQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVM 467
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
+ ++SW S+I G A H ++ L+ F +M +G +P+ TF+ L C++AG+V E
Sbjct: 468 NLHDVMSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGE 527
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+F +M Y + P HY C+IDM R G +EA IK M FEP+ +IW +A C+
Sbjct: 528 TFFRLMTDRYGLTPTPSHYACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKL 587
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H N+++G A ++L++L +D SY ++ +++ W+D V+ E + + WS
Sbjct: 588 HKNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWS 647
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
WI +K++V +F D H SA I+++L ELV
Sbjct: 648 WIEVKNEVSTFVARDTSHSDSASIYQMLAELV 679
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 243/490 (49%), Gaps = 40/490 (8%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN--VTL 178
K G + +A +FD +PR NVV+WT+ ISG +N QPE A +F DMLE+G +
Sbjct: 54 KSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNA 113
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
A A + ++ LG+Q+H+ V+ D +G+ L LYS CGS+ +A + F R+
Sbjct: 114 ALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEA 173
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+V+ +T+++ A NG+ + + +M+ +G+QPNE T+TS+ + C M +G Q+
Sbjct: 174 PDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQI 229
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H +K+ + ++ +++ Y + G D A+ +F+ + N+V+W +M+
Sbjct: 230 HGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMM--------- 280
Query: 359 AKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
L +G E AL +FS++ S ++P+ + FS L C + G QIH +K
Sbjct: 281 ---QLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGACGSVCL---GRQIHCSAIKC 334
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLF 477
++D+ V AL++MY + G + V ++ L+SWT+ I+ + S +A+ L
Sbjct: 335 NLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALL 394
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LID 533
M G PN F L++C++ ++ + + +K D +C LI+
Sbjct: 395 LQMHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCL-----ALKLGCDFKVCTGNALIN 449
Query: 534 MFVRLGCIEE---AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
M+ + G I AFD + D + W+ I G +HG L A ++ +P
Sbjct: 450 MYSKCGQIGSARLAFDVMNLHDV----MSWNSLIHGLAQHGAANLVLEAFSEMCSSGWQP 505
Query: 589 KDCESYAMLL 598
D A+L+
Sbjct: 506 DDSTFIAVLV 515
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 23/257 (8%)
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLN 380
+K G + +A LFD M N+V W I+G NG E A ++F+ +
Sbjct: 53 MKSGRLSDALDLFDRMPRKNVVAWTTAISG------------CTRNGQPEAAAAMFADML 100
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQ--GEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
SG+ + + ++ L C+ A GEQ+H+L ++ GF +D +G+ L+ +Y +CG
Sbjct: 101 ESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGS 160
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A VF M ++ +TS+++ + +A+++ M+ G++PN+ T LA
Sbjct: 161 MWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAE 220
Query: 499 CSNAGMVYEAL-GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
C M+ E + GY + + LID + R G + A + +D N
Sbjct: 221 CPR--MIGEQIHGYMLKVMGSQSVYA----STALIDFYSRYGDFDMAETVFENLD-SKNV 273
Query: 558 VIWSVFIAGCRRHGNME 574
V W + C R G +E
Sbjct: 274 VSWCSMMQLCIRDGRLE 290
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
NG SE +L Q + +EG ++ S L C + L +H +K G
Sbjct: 384 NGFSEKAVALLLQ----MHSEGFTPNDYAFSSGLSSCADLALLDQGRQLHCLALKLGC-- 437
Query: 108 DFFVMT--FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
DF V T L+N+Y KCG + A+ FD + +V+SW SLI G Q+ L + F +
Sbjct: 438 DFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHGAANLVLEAFSE 497
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCG 224
M +G P + T L C+ ++ G+ + +Y S + + G
Sbjct: 498 MCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHYACMIDMLGRNG 557
Query: 225 SLNSAIKAF-NRIREKNVMSWTTVIGAC 251
+ A+ N E +V+ W T++ +C
Sbjct: 558 RFDEALHMIKNMPFEPDVLIWKTLLASC 585
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 6/180 (3%)
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
DVV+ ++ K GR+ A +F M + +++WT+ I+G + A +F DML
Sbjct: 41 DVVLDCKRLDALMKSGRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAMFADML 100
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLG 539
+GV N ALAAC+ AG +LG ++ + D ++ CLI+++ R G
Sbjct: 101 ESGVAANDFACNAALAACAAAGAGALSLGE-QVHSLAVRAGFAADAWIGSCLIELYSRCG 159
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAML 597
+ A + ++M+ P+ V ++ ++ R+G++ Q+++ L+P + +ML
Sbjct: 160 SMWAAEEVFRRME-APDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSML 218
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/591 (33%), Positives = 333/591 (56%), Gaps = 20/591 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++VS+L C+N SL +H +K D FV ++++Y K G ++ A+ +F +
Sbjct: 430 TFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLI 489
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P + VSW +LI G N + E A+++ M G P V+ TA+ ACS++ + GK
Sbjct: 490 PGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGK 549
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIH +KY + +VG+SL LYS G + S+ K + +++ +I +N
Sbjct: 550 QIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNN 609
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK---LGYASNLR 312
+ + F ++L +G +P+ FT SI S C +S +G QVHS +K L ++L
Sbjct: 610 REDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLG 669
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GT 370
+ S++ +YLKC L+++A KL + H NLV W A I+G+AQ NG
Sbjct: 670 I--SLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQ------------NGYSD 715
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
++L +F ++ S ++ D TF+S+L CS + AL G++IH L +K+GF+S +AL+
Sbjct: 716 QSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALM 775
Query: 431 NMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+MY KCG + + +F E+ + ++ W SMI GFA + +++AL LF+ M + ++P++
Sbjct: 776 DMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDE 835
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT +G L ACS+AG++ E F+ M + Y I P +DHY CLID+ R G ++EA + I
Sbjct: 836 VTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVID 895
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++ F + VIW+ F+A C+ H + E G AA++L++++P+ +Y L + +AG W +
Sbjct: 896 QLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVE 955
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
V + RE+ + + SWI + +K F D HP + I+K+LD+L
Sbjct: 956 AKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDL 1006
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 270/528 (51%), Gaps = 16/528 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S++ S+L + + + IHA VK G + FV + L+N+Y K G + +A+KVFD
Sbjct: 328 STFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 387
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
N+V W +++ G+VQN E I +F M A + T + L AC +L+S+ +G
Sbjct: 388 STEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIG 447
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+H +K + D V N++ +YS G+++ A F+ I K+ +SW +I N
Sbjct: 448 RQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHN 507
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
E + + +M GI P+E + + + C + + G Q+H IK SN V
Sbjct: 508 EEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVG 567
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+S++ LY K G V+ ++K+ + ++V NA+I G Q +N EA+
Sbjct: 568 SSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQ-----------NNREDEAIE 616
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMY 433
+F ++ G KP +TF+SIL+ C+ V+ G+Q+H+ TLK+ L+ D +G +LV +Y
Sbjct: 617 LFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIY 676
Query: 434 KKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
KC +E A+++ E+ + L+ WT+ I+G+A + S Q+L +F M VR ++ TF
Sbjct: 677 LKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATF 736
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
L ACS + + ++ K + L+DM+ + G + +F+ K++
Sbjct: 737 ASVLKACSEIAALTDGKEIHGLIIKSGFVS-YETAASALMDMYSKCGDVISSFEIFKELK 795
Query: 553 FEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLL 598
+ N + W+ I G ++G N L + Q +LKP + +L+
Sbjct: 796 NKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLI 843
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 242/475 (50%), Gaps = 21/475 (4%)
Query: 102 KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
K GS D +++ G + +A+ + + + V+W ++IS Y Q+
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFG 313
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
++ DM G PT T + L+A +S+ + G+QIHA VK+ + + VG+SL +LY
Sbjct: 314 LYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYV 373
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
G ++ A K F+ EKN++ W ++ +N + ++ F M ++ ++FT S
Sbjct: 374 KHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVS 433
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ C + SL +G QVH + IK ++L V N+++ +Y K G +D A+ LF + +
Sbjct: 434 VLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKD 493
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WNA+I G L+ + EA+ + ++ G+ PD +F++ + CS +
Sbjct: 494 SVSWNALIVG-----------LAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNI 542
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
A E G+QIH ++K S+ VG++L+++Y K G +E + +V + +++ ++I
Sbjct: 543 RATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALI 602
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
TG ++ +A++LF+ +L G +P+ TF L+ C+ G V +G Y +
Sbjct: 603 TGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCT--GPVSSVIG---KQVHSYTL 657
Query: 522 KPVMDHY-----MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
K + + + L+ ++++ +E+A + ++ N V W+ I+G ++G
Sbjct: 658 KSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNG 712
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/513 (25%), Positives = 243/513 (47%), Gaps = 50/513 (9%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L C +L +H ++K+G F LV++Y KC +++A++VFD + +
Sbjct: 166 VLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPD 225
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+ W S+I+GY + + + A+ +F M + G+ P VT T ++ +S+
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM----------- 274
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
G L+ A RI+ + ++W VI + ++G +
Sbjct: 275 ------------------------GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESE 310
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
+ M +G+ P T S+ S +M + G Q+H+ +K G +N+ V +S++
Sbjct: 311 VFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLIN 370
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
LY+K G + +A+K+FD + N+V WNAM+ G Q +DL E + +F +
Sbjct: 371 LYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQ------NDLQ-----EETIQMFQYM 419
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ ++ D +TF S+L C L +L+ G Q+H +T+K +D+ V A+++MY K G I
Sbjct: 420 RRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAI 479
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+ A +F + + +SW ++I G A++ +A+ + + M G+ P++V+F A+ AC
Sbjct: 480 DVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINAC 539
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVI 559
SN E +Y + LID++ + G +E + + +D + V
Sbjct: 540 SNI-RATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVD-ASSMVP 597
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
+ I G ++ + +Q+LK KP +
Sbjct: 598 INALITGLVQNNREDEAIELFQQVLKDGFKPSN 630
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/501 (23%), Positives = 218/501 (43%), Gaps = 69/501 (13%)
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD--NLPRINVVSWTSLISGYVQ 152
++HA +++ G + LV++YG+ G + A + + + +S++S + +
Sbjct: 77 VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHAR 136
Query: 153 NSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
+ P + F + G P L L+ACS L ++ G+Q+H V+K
Sbjct: 137 SGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAF 196
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
L +Y+ C + A + F+ I + + W ++I G Q L FS+M G
Sbjct: 197 CQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMG 256
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
P++ T +I S +M G + +A+
Sbjct: 257 SAPDQVTYVTIISTLASM-----------------------------------GRLSDAR 281
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
L + + V WNA+I+ ++Q +E ++ + G+ P TF
Sbjct: 282 TLLKRIQMPSTVAWNAVISSYSQ-----------SGLESEVFGLYKDMKRQGLMPTRSTF 330
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+S+L+ + + A ++G+QIHA +K G ++V VG++L+N+Y K G I A +VF +
Sbjct: 331 ASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTE 390
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
+ ++ W +M+ GF + L + +Q+F+ M A + + TFV L AC N L
Sbjct: 391 KNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACIN-------LDS 443
Query: 512 FEMMQKEY--KIKPVMDHYM----CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSV 562
++ ++ + IK MD + ++DM+ +LG I+ A F I D V W+
Sbjct: 444 LDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKD----SVSWNA 499
Query: 563 FIAGCRRHGNMELGFYAAEQL 583
I G + E Y +++
Sbjct: 500 LIVGLAHNEEEEEAVYMLKRM 520
>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g40410, mitochondrial; Flags: Precursor
gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 608
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 326/587 (55%), Gaps = 24/587 (4%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+L A+ +C S+E RL +H VVK + +G+ L Y G A K F+ +
Sbjct: 36 SLIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKML-SE-GIQPNEFTLTSISSVCGTMLSLRV 294
E++++SW ++I G + S+M+ SE G +PNE T S+ S C S
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H L +K G ++V N+ + Y K G + + KLF+ +S NLV+WN MI H Q
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 355 MMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG E L+ F+ G +PD TF ++L C + + + IH L
Sbjct: 213 ------------NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ GF + + TAL+++Y K GR+E +S VF E+++ ++WT+M+ +A H A
Sbjct: 261 IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
++ FE M+ G+ P+ VTF L ACS++G+V E YFE M K Y+I P +DHY C++D
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVD 380
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +++A+ IK+M EP+ +W + CR + + +LG AAE+L +L+P+D +
Sbjct: 381 LLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRN 440
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y ML +I+ ++G W+D + ++NL +++ L S+I +K++ F D HP+S +I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Query: 654 FKVLDELVEKAKC-FGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPIL 707
K L E+ +K K GYK + F L D +E HSEK+A+AFGLL + PI+
Sbjct: 501 QKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPII 560
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ K+ +C DCH K I+ + R II+RDSKR H F++G C+C D+
Sbjct: 561 IRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDY 607
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 171/339 (50%), Gaps = 16/339 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
SS ++ ++ CV S+ ++H +VK+ S++ F+ LV Y + G+ A+K+F
Sbjct: 33 NVSSLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLF 89
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACSSLES 190
D +P ++VSW SLISGY V M+ E G P VT + ++AC S
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
G+ IH V+K+ ++ V N+ + Y G L S+ K F + KN++SW T+I
Sbjct: 150 KEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG A +GL +F+ G +P++ T ++ C M +R+ +H L + G++ N
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ +++ LY K G ++++ +F ++ + + W AM+A +A H G
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA-----------THGFGR 318
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+A+ F + G+ PD TF+ +L CS +E+G+
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++++++L+ C + + A+ IH I+ G + + T L+++Y K G +E++
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + + ++WT++++ Y + AI F M+ G P +VT L ACS
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 189 ESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTT 246
+ GK + K Y+ + + + L G L A + E + W
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 247 VIGAC 251
++GAC
Sbjct: 410 LLGAC 414
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 224/690 (32%), Positives = 352/690 (51%), Gaps = 69/690 (10%)
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM--LEAGNYPT---- 174
+ GN+E A+ FD +P S+ +LI+GY +N P+ A+ +F M + G+Y
Sbjct: 29 RAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLGSYNALIAG 88
Query: 175 -NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
++ T A ++L SI L + ++ SL Y G L AI+ F
Sbjct: 89 LSLRRHTLPDAAAALASIPLPPSVVSF-------------TSLLRGYVRHGLLADAIRLF 135
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS------ISSVCG 287
+++ E+N +++T ++G + G + + F +M + + L+ I+
Sbjct: 136 HQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARA 195
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRV------------RNSIMYL-----YLKCGLVDEA 330
+ V + GYA N +V RN + + Y++ G V++A
Sbjct: 196 LFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDA 255
Query: 331 QKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAK---DDLSAHNGGT--------------- 370
+ LF+ M + NAM+ G Q M+D AK + + A + GT
Sbjct: 256 EDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWSAMIKVYEQNEFLM 315
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
EALS F ++ G++P+ +F SILT+C+ L + G ++HA L+ F +DV +AL+
Sbjct: 316 EALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALI 375
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
MY KCG +++A RVF + ++ W SMITG+A H L +AL +F+D+ LA + P+ +
Sbjct: 376 TMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGI 435
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
T++G L ACS G V E F M I+ HY C++D+ R G ++EA D I
Sbjct: 436 TYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINN 495
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M EP+ +IW + CR H N E+ AA++LL+L+P Y +L I+ S GRWED
Sbjct: 496 MPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDA 555
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQSAEIFKVLDELVEKAKCFGY 669
+ ++ L+++ SWI V+ F D L HP+ A I +L+EL GY
Sbjct: 556 SDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGY 615
Query: 670 KQQESFEL--TDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
SF L DEE + YHSE+ A+A+GLL P PI V+K+ +C DCH+ IK+
Sbjct: 616 SADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLRVCGDCHSAIKL 675
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IT +T+REII+RD+ R H F +G C+CRD+
Sbjct: 676 ITKITSREIILRDANRFHHFKDGLCSCRDY 705
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 201/419 (47%), Gaps = 31/419 (7%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
VR +A+ + + P+ +Y LL ++ ++ A + + +D T
Sbjct: 123 VRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEM----PDKDVVART 178
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G + EA+ +FD +P+ NVVSWT++ISGY QN + LA +F M +
Sbjct: 179 AMLSGYCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVS 238
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
L + A ++ L + + V + N++ + G +++A F
Sbjct: 239 WTAMLVGYIQAGHVEDAEDLFNAMPDHPV--------AACNAMMVGFGQHGMVDAAKAMF 290
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
R+ ++ +W+ +I +N ++ L F +ML GI+PN + SI +VC + +
Sbjct: 291 ERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATAD 350
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G ++H+ ++ + +++ ++++ +Y+KCG +D+A+++F+ ++V WN+MI G+A
Sbjct: 351 YGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYA 410
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
Q H G EAL IF L + M PD T+ +LT CS +++G +I
Sbjct: 411 Q-----------HGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFN- 458
Query: 414 TLKTGFLSDVVVGTA----LVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
G S + +G A +V++ + G ++ A + M I W +++ H
Sbjct: 459 --SMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMH 515
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 49/246 (19%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLS 364
N+ + ++ G ++ A+ FD M ++NA+IAG+ + + DL
Sbjct: 21 NARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLG 80
Query: 365 AHNGGTEALSI--------FSKLNSSGMKPDLYTFSSILTICSR--LVA--------LEQ 406
++N LS+ + L S + P + +F+S+L R L+A + +
Sbjct: 81 SYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQMPE 140
Query: 407 GEQIHALTLKTGFLS-----------------DVVVGTALVNMYKKCGRIERASRVFVEM 449
+ L GFL DVV TA+++ Y + GRI A +F EM
Sbjct: 141 RNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGRITEARALFDEM 200
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R ++SWT+MI+G+A + A +LFE M N+V++ L AG V +A
Sbjct: 201 PKRNVVSWTAMISGYAQNGKVILARKLFEVM----PDRNEVSWTAMLVGYIQAGHVEDAE 256
Query: 510 GYFEMM 515
F M
Sbjct: 257 DLFNAM 262
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 333/621 (53%), Gaps = 29/621 (4%)
Query: 163 FLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
L L A P ++ + L ++LG Q+HA+++ + VG+ + + Y++
Sbjct: 58 LLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYAS 117
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
G ++S++ FN I E + + + ++I A G A + + + M S G + FT +
Sbjct: 118 SGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFV 177
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+LS+ +G VH L +++G +L V S++ LY KCG +++A K+FD M+ ++
Sbjct: 178 LKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDV 237
Query: 343 VTWNAMIAGHAQ--MMDLAK------------------DDLSAHNGGTEALSIFSKL--N 380
+WNA++AG+ + +D A S +ALS+F ++
Sbjct: 238 SSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVKE 297
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
SG++P+ T S+L C++L LE+G QIH L + G S+ V AL MY KCG +
Sbjct: 298 DSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLV 357
Query: 441 RASRVFVEMST--RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
A F +++ + LI+W +MIT +A++ QA+ F +M+ AG++P+ +TF G L+
Sbjct: 358 DARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSG 417
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS++G+V L YF M Y I P ++HY C+ D+ R G + EA + +M
Sbjct: 418 CSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPS 477
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW +A CR+H N+E+ AA +L L+P++ +Y +L +++ AGRW++V ++ + +
Sbjct: 478 IWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVK 537
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELT 678
+ ++ SWI I K + F D HPQ EI+ L+ L EK K GY S+ L
Sbjct: 538 SQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLH 597
Query: 679 D-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
D +E + HSEKLA+AFG+LNTP + + V K+ +C DCH + I+ + RE+
Sbjct: 598 DISEEEKEFNLIAHSEKLAVAFGILNTPAETVLRVTKNLRICGDCHTAMVFISEIYGREV 657
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
IVRD R H F G C+C D+
Sbjct: 658 IVRDINRFHHFKGGCCSCGDY 678
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 195/446 (43%), Gaps = 48/446 (10%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
Q L L+ SY + Q L +HAH++ G V + +V
Sbjct: 55 LQNLLQPLSAPGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAF 114
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y G+++ + VF+ + + + + S+I Y + E + + M G T
Sbjct: 115 YASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTF 174
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN---- 234
L + L S+ +GK +H +++ + D V SL LY CG +N A K F+
Sbjct: 175 PFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTI 234
Query: 235 ---------------------------RIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
R+ +N++SWTT+I ++G A Q L F +M
Sbjct: 235 RDVSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEM 294
Query: 268 LSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+ E G++PN T+ S+ C + +L G Q+H L ++G SN V ++ +Y KCG
Sbjct: 295 VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCG 354
Query: 326 LVDEAQKLFDGMSH--VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
+ +A+ FD ++ NL+ WN MI +A ++ G +A+S F ++ +G
Sbjct: 355 SLVDARNCFDKLNRNEKNLIAWNTMITAYA-----------SYGHGLQAVSTFREMIQAG 403
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV-NMYKKCGRIERA 442
++PD TF+ +L+ CS ++ G + T ++ V A V ++ + GR+ A
Sbjct: 404 IQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEA 463
Query: 443 SRVFVEMSTRTLIS-WTSMITGFANH 467
S++ EM S W S++ H
Sbjct: 464 SKLVGEMPMPAGPSIWGSLLAACRKH 489
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 159/324 (49%), Gaps = 39/324 (12%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL---- 135
+L+ V S+ + +H I++ G D +V T L+ +YGKCG + +A KVFDN+
Sbjct: 177 VLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRD 236
Query: 136 ---------------------------PRINVVSWTSLISGYVQNSQPELAIHVFLDML- 167
P N+VSWT++ISGY Q+ + A+ +F +M+
Sbjct: 237 VSSWNALLAGYTKSGCIDAALAIFERMPWRNIVSWTTMISGYSQSGLAQQALSLFDEMVK 296
Query: 168 -EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
++G P VT+ + L AC+ L ++ G+QIH + + SV +L ++Y+ CGSL
Sbjct: 297 EDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSL 356
Query: 227 NSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
A F+++ EKN+++W T+I A G +Q + F +M+ GIQP++ T T + S
Sbjct: 357 VDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLS 416
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVN 341
C + VG + + + Y+ N RV + + L + G + EA KL M
Sbjct: 417 GCSHSGLVDVGLKYFN-HMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAG 475
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSA 365
W +++A + +L + +A
Sbjct: 476 PSIWGSLLAACRKHRNLEMAETAA 499
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 302/551 (54%), Gaps = 10/551 (1%)
Query: 81 LQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINV 140
LQ C+ K+ +IH I+ G + + T L+ Y K G+ A+KVFD +P V
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
VSW++ ISGY QN + A+ VFLDML AG T G+ L AC+ L ++ G QI
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
+ K + + V ++L L+S CG + A F + E++V+SW +IGA G +
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYL 320
R F M+ EG+ P+ FT S+ G + Q+H L I+LGY S++ + S++
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
Y KC + A L+ M ++++ A++ G+A+ N ++AL +F ++
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYAR----------DSNYSSKALDLFKEIQ 293
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
MK D S+ IC+ + +L G QIHAL LK DV +G AL++MY K G I+
Sbjct: 294 QMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIK 353
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A+R F EM + +ISWTS+ITG+ +H H+A+ LF+ M G++PN +TF+ L AC+
Sbjct: 354 DANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACN 413
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+ G+ E F M +Y I P +H+ C++D+F R G +EEA++ I KM+ +PN +W
Sbjct: 414 HCGLTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLW 473
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ C +GNM L AA L K+ P++ +Y +L DI+ +AG W++ ++ L E
Sbjct: 474 GAILGACYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEER 533
Query: 621 KLSETDDWSWI 631
L + +S+I
Sbjct: 534 NLKKAPGYSFI 544
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 207/423 (48%), Gaps = 20/423 (4%)
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
+L C ++ + G IH ++ + + L YS G SA K F+R+ E+
Sbjct: 3 SLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+SW+ I +NG L F ML G + N+FT S+ C + L+ G Q+
Sbjct: 63 VVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQG 122
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
K +ASNL V+++++ L+ KCG +++A LF M ++V+WNA+I +A
Sbjct: 123 CLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYA------- 175
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
+ +G ++ +F + GM PDL+TF S+L + + QIH L ++ G+
Sbjct: 176 --VQGFSG--DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYG 231
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS-LSHQALQLFED 479
S + + +L++ Y KC + A ++ M + +IS T+++TG+A S S +AL LF++
Sbjct: 232 SHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKE 291
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVR 537
+ ++ + V C+N + ++G ++ K KP D M LIDM+ +
Sbjct: 292 IQQMHMKIDDVILCSMFNICANISSL--SVGR-QIHALALKCKPTYDVAMGNALIDMYAK 348
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIA--GCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
G I++A +M+ E N + W+ I G HG+ + + + LKP D +
Sbjct: 349 SGEIKDANRAFNEME-EKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLS 407
Query: 596 MLL 598
+L
Sbjct: 408 LLF 410
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 208/431 (48%), Gaps = 22/431 (5%)
Query: 59 FQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+Q+AL V L G K +Y S+L+ C + L I + K+ + V +
Sbjct: 79 YQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSA 138
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L++++ KCG ME+A +F + +VVSW ++I Y + +F M++ G P
Sbjct: 139 LLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPD 198
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T G+ L A + QIH +++ S+ SL Y+ C SL SA +
Sbjct: 199 LFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYK 258
Query: 235 RIREKNVMSWTTVI-GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ K+++S T ++ G ++ + + L F ++ ++ ++ L S+ ++C + SL
Sbjct: 259 SMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLS 318
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
VG Q+H+L +K ++ + N+++ +Y K G + +A + F+ M N+++W ++I G+
Sbjct: 319 VGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYG 378
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHA 412
+H G EA+++F K+ G+KP+ TF S+L C+ +G E +
Sbjct: 379 -----------SHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNN 427
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG----FANHS 468
+ K L + +V+++ + G +E A + +M+ + S I G + N
Sbjct: 428 MISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMP 487
Query: 469 LSHQ-ALQLFE 478
L+ + A+ LF+
Sbjct: 488 LAEEAAIHLFK 498
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 200/591 (33%), Positives = 336/591 (56%), Gaps = 20/591 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++VS+L C+N SL +H +K G D FV ++++Y K G ++ A+ +F +
Sbjct: 427 TFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLI 486
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
P + VSW +LI G N + AI++ M G V+ TA+ ACS++ +I GK
Sbjct: 487 PVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGK 546
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
QIH+ +KY + +VG+SL LYS G + S+ K + +++ +I +N
Sbjct: 547 QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNN 606
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK---LGYASNLR 312
+ + F ++L +G +P+ FT TSI S C +S +G QVH +K L ++L
Sbjct: 607 REDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLG 666
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GT 370
+ S++ +YLKC L+++A KL + + H NLV W A I+G+AQ NG
Sbjct: 667 I--SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQ------------NGYSV 712
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
++L +F ++ S ++ D TF+S+L CS + AL G++IH L +K+GF+S +AL+
Sbjct: 713 QSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALM 772
Query: 431 NMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+MY KCG + + +F E+ R ++ W SMI GFA + +++AL LF+ M + ++P+
Sbjct: 773 DMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDD 832
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT +G L ACS+AG++ E L +F+ M + Y I P +DHY CLID+ R G +++A + I
Sbjct: 833 VTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVID 892
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
++ F + VIW+ ++A C+ H + E G AA++L++++P+ +Y L + +AG W +
Sbjct: 893 QLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVE 952
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
V + RE+ + + SWI + +K F D HP + I+K+LD+L
Sbjct: 953 AKVAREAMREKGVMKFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDL 1003
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 268/528 (50%), Gaps = 16/528 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S++ S+L N + IHA VK G + FV + L+N+Y K G + +A+KVFD
Sbjct: 325 STFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDF 384
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
N+V W +++ G+VQN E I +F M A + T + L AC +L S+ LG
Sbjct: 385 STEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLG 444
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+Q+H +K + D V N++ +YS G+++ A F+ I K+ +SW +I N
Sbjct: 445 RQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHN 504
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
E + + +M GI +E + + + C + ++ G Q+HS IK SN V
Sbjct: 505 EEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVG 564
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+S++ LY K G V+ ++K+ + ++V NA+I G Q +N EA+
Sbjct: 565 SSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQ-----------NNREDEAIE 613
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMY 433
+F ++ G KP +TF+SIL+ C+R V+ G+Q+H TLK+ L+ D +G +LV +Y
Sbjct: 614 LFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIY 673
Query: 434 KKCGRIERASRVFVEMST-RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
KC +E A+++ E+ + L+ WT+ I+G+A + S Q+L +F M VR ++ TF
Sbjct: 674 LKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATF 733
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
L ACS + + ++ K + L+DM+ + G + +F+ K++
Sbjct: 734 TSVLKACSEMAALTDGKEIHGLIVKSGFVS-YETATSALMDMYSKCGDVISSFEIFKELK 792
Query: 553 FEPNEVIWSVFIAGCRRHG--NMELGFYAAEQLLKLKPKDCESYAMLL 598
N + W+ I G ++G N L + Q ++KP D +L+
Sbjct: 793 NRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLI 840
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 246/475 (51%), Gaps = 21/475 (4%)
Query: 102 KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIH 161
K GS D +++ G + +A+ + + + V+W ++I+ Y Q+
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFG 310
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYS 221
++ DM + G PT T + L+A +++ + G+QIHA VK+ + + VG+SL +LY
Sbjct: 311 LYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYV 370
Query: 222 TCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
G ++ A K F+ EKN++ W ++ +N + ++ F M ++ ++FT S
Sbjct: 371 KHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVS 430
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ C + SL +G QVH + IK G ++L V N+++ +Y K G +D A+ LF + +
Sbjct: 431 VLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKD 490
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WNA+I G L+ + EA+++ ++ G+ D +F++ + CS +
Sbjct: 491 SVSWNALIVG-----------LAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNI 539
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
A+E G+QIH+ ++K S+ VG++L+++Y K G +E + +V + +++ ++I
Sbjct: 540 WAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALI 599
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
TG ++ +A++LF+ +L G +P+ TF L+ C+ V +G Y +
Sbjct: 600 TGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRP--VSSVIG---KQVHCYTL 654
Query: 522 KPVMDHY-----MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
K + + + L+ ++++ +E+A ++++ N V W+ I+G ++G
Sbjct: 655 KSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNG 709
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 231/475 (48%), Gaps = 51/475 (10%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L C +L + +H ++K+G F LV++Y KCG +++A+++FD + +
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPD 222
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+ WTS+I+GY + + + A+ +F M + G+ P VT T ++ +S+
Sbjct: 223 TICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASM----------- 271
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
G L A RIR + ++W VI + ++G +
Sbjct: 272 ------------------------GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
+ M +G+ P T SI S M + G Q+H+ +K G +N+ V +S++
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
LY+K G + +A+K+FD + N+V WNA++ G Q ++L E + +F +
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQ------NELQ-----EETIQMFQYM 416
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ ++ D +TF S+L C L +L+ G Q+H +T+K G +D+ V A+++MY K G I
Sbjct: 417 RRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAI 476
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+ A +F + + +SW ++I G A++ +A+ + + M G+ ++V+F A+ AC
Sbjct: 477 DVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINAC 536
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMD 552
SN + ++ K +H + LID++ + G +E + + +D
Sbjct: 537 SNIWAIETGK---QIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVD 588
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 293 RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM--IA 350
R +H+ ++LG R+ ++++ LY + G V A W A+
Sbjct: 70 RACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYA--------------WRALACCT 115
Query: 351 GHAQMMDLAKDDLSAH---NGGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQ 406
G A LS H + L F ++ S G PD + + +L+ CSRL ALE
Sbjct: 116 GAPASSAAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEH 175
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G Q+H LK+GF S V LV+MY KCG ++ A R+F ++ I WTSMI G+
Sbjct: 176 GRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHR 235
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
QAL LF M G P+QVT V ++ ++ G + +A
Sbjct: 236 VGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDA 277
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 214/691 (30%), Positives = 366/691 (52%), Gaps = 39/691 (5%)
Query: 89 SLSNAEIIHAHIVKTGS--HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV-SWTS 145
S A+ +HAHIVKT H D ++ L + ++ + +F++LP +W+S
Sbjct: 24 STRQAKQLHAHIVKTKGTLHSDNILVLSLYSNLNL---LQHSLHLFNSLPSPPPPLAWSS 80
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
+I Y +S L+ F M P + L A + L+ +L +HA V+
Sbjct: 81 IIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLG 140
Query: 206 TEDDTSVGNSLCSLYSTC---------------GSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ D + N+L + Y+ ++ K F+ + ++V+SW TVI
Sbjct: 141 LDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAG 200
Query: 251 CGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+NG V+ L +M G ++P+ FTL+SI + + + G ++H ++ G+
Sbjct: 201 FAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDG 260
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ + +S++ +Y KC ++ + + F + + ++WN++IAG Q + +
Sbjct: 261 DVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDR--------- 311
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
L F ++ +KP +FSS++ C+ L AL G Q+H ++ GF + + ++L
Sbjct: 312 --GLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSL 369
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
V+MY KCG I+ A VF + R +++WT++I G A H + A+ LFE+ML GVRP
Sbjct: 370 VDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCY 429
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
V F+ L ACS+AG+V E YF M++++ I P ++HY + D+ R G +EEA+DFI
Sbjct: 430 VAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFIS 489
Query: 550 KM-DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
M +P +WS+ +A CR H ++EL ++LL + ++ +Y ++ +I+ +A RW+
Sbjct: 490 NMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWK 549
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
D A ++ R++ L +T SWI + ++V++F D HP +I K LD L+E+ + G
Sbjct: 550 DAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEG 609
Query: 669 Y--KQQESFELTDEESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y + DEE HSE+LAIA+G+++T + I V+K+ +C DCH IK
Sbjct: 610 YVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIISTTAGTTIRVIKNIRVCADCHTAIK 669
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IT + REI VRD+ R H F NG C+C D+
Sbjct: 670 FITKIVGREITVRDNSRFHHFKNGSCSCGDY 700
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 209/424 (49%), Gaps = 34/424 (8%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN------------ 124
+ SLL+ K A +HA V+ G D ++ L+N Y K N
Sbjct: 113 FPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRG 172
Query: 125 ---MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGT 180
++ +KVFD +P +VVSW ++I+G+ QN A+ + +M + G P + TL +
Sbjct: 173 ESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSS 232
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L + + GK+IH Y V+ + D +G+SL +Y+ C L +++AF + K+
Sbjct: 233 ILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKD 292
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW ++I C +NGE +GL FF +ML E ++P + +S+ C + +L +G Q+H
Sbjct: 293 AISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHG 352
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
++LG+ N + +S++ +Y KCG + A+ +FD + ++V W A+I G A
Sbjct: 353 CIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAM------ 406
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGF 419
H +A+S+F + G++P F ++LT CS +++G +++ G
Sbjct: 407 -----HGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGI 461
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMS--TRTLISWTSMITGFANHSLSHQALQLF 477
+ A+ ++ + GR+E A M T W+ ++ +H++++L
Sbjct: 462 APGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAA----CRAHKSVELA 517
Query: 478 EDML 481
E +L
Sbjct: 518 EKVL 521
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 154/301 (51%), Gaps = 8/301 (2%)
Query: 59 FQEALSVLTE---GPKVQTSSYV--SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
+ EAL ++ E K++ S+ S+L ++ + IH + V+ G D F+ +
Sbjct: 207 YVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGS 266
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+++Y KC +E + + F LPR + +SW S+I+G VQN + + + F ML+ P
Sbjct: 267 SLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKP 326
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
V+ + + AC+ L ++ LG+Q+H +V+ +D+ + +SL +Y+ CG++ A F
Sbjct: 327 MAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVF 386
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+RI ++++++WT +I C +G A+ + F ML +G++P ++ + C +
Sbjct: 387 DRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVD 446
Query: 294 VGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV--TWNAMIA 350
G + +S+ G A L ++ L + G ++EA M V W+ ++A
Sbjct: 447 EGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLA 506
Query: 351 G 351
Sbjct: 507 A 507
>gi|449500413|ref|XP_004161091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 337/623 (54%), Gaps = 25/623 (4%)
Query: 141 VSWTS--LISGYVQN-SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+ W S L + ++Q+ +Q L +H ++ P + + L A +S SI ++I
Sbjct: 3 LRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAI-VSALLIAVNSCPSISNCREI 61
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA V K D +G+ L + Y+ G A+K F+ + K+++SW ++I
Sbjct: 62 HARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLH- 120
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ F++ ++PNE T+ S+ S C +L G +H GIK+G ++V NS+
Sbjct: 121 MSLTAFYTMKFEMSVKPNEVTILSMISACNG--ALDAGKYIHGFGIKVGGTLEVKVANSL 178
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIF 376
+ +Y K G + A +LF+ + N V+WN++IA NG E + F
Sbjct: 179 INMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT------------NGCAREGIDYF 226
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+K+ G++ D T ++L C L + E IH L TGF + + + TAL++ Y K
Sbjct: 227 NKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL 286
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
GR+ + VF E+ ++WT+M+ G+A H L +A++LFE M G+ P+ VTF L
Sbjct: 287 GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLL 346
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS++G+V E YF +M + Y I+P +DHY C++D+ R G + +A++ I+ M EPN
Sbjct: 347 SACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPN 406
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + CR HGN+ELG AE L+ ++P D +Y ML +++ ++ W+D A V+ L
Sbjct: 407 AGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRAL 466
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+E L T +S I +K + F D HP++ +I+ L+EL+ K + GY + +
Sbjct: 467 LKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYV 526
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E HSEKLAIAFGLL + +++ K+ +C DCH+ K+I+ + R
Sbjct: 527 LQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKR 586
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
II+RD KR H F +G C+C D+
Sbjct: 587 TIIIRDPKRFHHFSDGFCSCADY 609
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 195/382 (51%), Gaps = 20/382 (5%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P+ S+ + + C S+SN IHA + K+ ++D F+ LV Y K G E+A
Sbjct: 38 PEAIVSALLIAVNSC---PSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAL 94
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSL 188
K+FD++P ++VSW SLISG+ + +++ F M E P VT+ + ++AC+
Sbjct: 95 KLFDDMPHKDLVSWNSLISGFSRCLH--MSLTAFYTMKFEMSVKPNEVTILSMISACNG- 151
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ GK IH + +K + V NSL ++Y G L SA + F I + N +SW ++I
Sbjct: 152 -ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSII 210
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A NG A +G+ +F+KM GI+ +E T+ ++ C + ++ +H L G+
Sbjct: 211 AAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFG 270
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ + + +++ Y K G + + +F + + V W AM+AG+A AH
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYA-----------AHGL 319
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGT 427
G EA+ +F + + G++PD TF+ +L+ CS + +G+ + ++ G V +
Sbjct: 320 GREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYS 379
Query: 428 ALVNMYKKCGRIERASRVFVEM 449
+V++ +CG + A V M
Sbjct: 380 CMVDLLGRCGLLNDAYEVIQNM 401
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 6/283 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + +S++ C +L + IH +K G + V L+N+YGK G++ A +
Sbjct: 136 KPNEVTILSMISAC--NGALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACR 193
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F+ +P N VSW S+I+ V N I F M G T+ L AC L
Sbjct: 194 LFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+L + IH + ++ +L Y+ G L+++ F + + ++WT ++
Sbjct: 254 GKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAG 313
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+G + ++ F M ++G++P+ T T + S C + G ++ ++ Y
Sbjct: 314 YAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEV-YGIE 372
Query: 311 LRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
RV + ++ L +CGL+++A ++ M N W A++
Sbjct: 373 PRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLG 415
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + ++LLQ C++ AE IH + TG + T L++ Y K G + +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + + V+WT++++GY + AI +F M G P +VT L+ACS
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352
Query: 189 ESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-NRIREKNVMSWTT 246
+ GK + + Y E + + L CG LN A + N E N W
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412
Query: 247 VIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
++GAC +G G +++ E + P + + S
Sbjct: 413 LLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLS 448
>gi|449450646|ref|XP_004143073.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Cucumis sativus]
Length = 610
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 337/623 (54%), Gaps = 25/623 (4%)
Query: 141 VSWTS--LISGYVQN-SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+ W S L + ++Q+ +Q L +H ++ P + + L A +S SI ++I
Sbjct: 3 LRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAI-VSALLIAVNSCPSISNCREI 61
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA V K D +G+ L + Y+ G A+K F+ + K+++SW ++I
Sbjct: 62 HARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPHKDLVSWNSLISGFSRCLH- 120
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ F++ ++PNE T+ S+ S C +L G +H GIK+G ++V NS+
Sbjct: 121 MSLTAFYTMKFEMSVKPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANSL 178
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIF 376
+ +Y K G + A +LF+ + N V+WN++IA NG E + F
Sbjct: 179 INMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVT------------NGCAREGIDYF 226
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
+K+ G++ D T ++L C L + E IH L TGF + + + TAL++ Y K
Sbjct: 227 NKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKL 286
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
GR+ + VF E+ ++WT+M+ G+A H L +A++LFE M G+ P+ VTF L
Sbjct: 287 GRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLL 346
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS++G+V E YF +M + Y I+P +DHY C++D+ R G + +A++ I+ M EPN
Sbjct: 347 SACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPN 406
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + CR HGN+ELG AE L+ ++P D +Y ML +++ ++ W+D A V+ L
Sbjct: 407 AGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAKVRAL 466
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+E L T +S I +K + F D HP++ +I+ L+EL+ K + GY + +
Sbjct: 467 LKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSKTEYV 526
Query: 677 LTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D +E HSEKLAIAFGLL + +++ K+ +C DCH+ K+I+ + R
Sbjct: 527 LQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISLIEKR 586
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
II+RD KR H F +G C+C D+
Sbjct: 587 TIIIRDPKRFHHFSDGFCSCADY 609
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 195/382 (51%), Gaps = 20/382 (5%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P+ S+ + + C S+SN IHA + K+ ++D F+ LV Y K G E+A
Sbjct: 38 PEAIVSALLIAVNSC---PSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAL 94
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALTACSSL 188
K+FD++P ++VSW SLISG+ + +++ F M E P VT+ + ++ACS
Sbjct: 95 KLFDDMPHKDLVSWNSLISGFSRCLH--MSLTAFYTMKFEMSVKPNEVTILSMISACSG- 151
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ GK IH + +K + V NSL ++Y G L SA + F I + N +SW ++I
Sbjct: 152 -ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSII 210
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A NG A +G+ +F+KM GI+ +E T+ ++ C + ++ +H L G+
Sbjct: 211 AAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFG 270
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ + + +++ Y K G + + +F + + V W AM+AG+A AH
Sbjct: 271 AKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAGYA-----------AHGL 319
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGT 427
G EA+ +F + + G++PD TF+ +L+ CS + +G+ + ++ G V +
Sbjct: 320 GREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYS 379
Query: 428 ALVNMYKKCGRIERASRVFVEM 449
+V++ +CG + A V M
Sbjct: 380 CMVDLLGRCGLLNDAYEVIQNM 401
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 6/283 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + +S++ C +L + IH +K G + V L+N+YGK G++ A +
Sbjct: 136 KPNEVTILSMISACSG--ALDAGKYIHGFGIKVGGTLEVKVANSLINMYGKSGDLTSACR 193
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+F+ +P N VSW S+I+ V N I F M G T+ L AC L
Sbjct: 194 LFEAIPDPNTVSWNSIIAAQVTNGCAREGIDYFNKMRRLGIEQDEGTILALLQACLHLGV 253
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+L + IH + ++ +L Y+ G L+++ F + + ++WT ++
Sbjct: 254 GKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSASYGVFTEVGFADRVAWTAMLAG 313
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+G + ++ F M ++G++P+ T T + S C + G ++ ++ Y
Sbjct: 314 YAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHSGLVNEGKSYFNVMSEV-YGIE 372
Query: 311 LRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
RV + ++ L +CGL+++A ++ M N W A++
Sbjct: 373 PRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLG 415
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + ++LLQ C++ AE IH + TG + T L++ Y K G + +
Sbjct: 233 GIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDTYAKLGRLSAS 292
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + + V+WT++++GY + AI +F M G P +VT L+ACS
Sbjct: 293 YGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTFTHLLSACSHS 352
Query: 189 ESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAF-NRIREKNVMSWTT 246
+ GK + + Y E + + L CG LN A + N E N W
Sbjct: 353 GLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGA 412
Query: 247 VIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
++GAC +G G +++ E + P + + S
Sbjct: 413 LLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLS 448
>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
Length = 615
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/602 (32%), Positives = 323/602 (53%), Gaps = 17/602 (2%)
Query: 159 AIHVFLDMLE-AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC 217
AI +D+LE +G L + C+ +++ G++IH ++ + + N L
Sbjct: 24 AIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLV 83
Query: 218 SLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
+Y CGSL A + F+ ++ KNV SWT ++ ++G V+ ++ F +M EG P+
Sbjct: 84 DMYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRV 143
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
L CG +L G ++HS G S+L N+I+ +Y KCG + EA +F M
Sbjct: 144 ALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRM 203
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
N+++W+ MIA Q ++L+ EAL F + GM+ D T+ S+L
Sbjct: 204 PEKNVISWSTMIAAFCQ------NELA-----DEALLFFKLMQQEGMELDRITYVSVLDA 252
Query: 398 CSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISW 457
+ + ALE G+ +H + G + +VVG LVNMY KCG + A VF M + ++SW
Sbjct: 253 YTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSW 312
Query: 458 TSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
+M+ + + S +AL LF+ M L GVRPN +TFV L CS++G +A+ +F M++
Sbjct: 313 NAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQ 372
Query: 518 EYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
++ I P H+ CLIDM R G +EEA + I+ M + V+W+ + C H + +
Sbjct: 373 DFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAA 432
Query: 578 YAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKV 637
AAE+ + +P+ +Y ML +++ + +W++ A V+ + + + SWI I +V
Sbjct: 433 RAAEEAFQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQV 492
Query: 638 YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE-----SFELTDEESASVYHSEKLA 692
+ F D +HP + IFK L L+ + + GY+ S E +++ YHSEKLA
Sbjct: 493 HEFVAGDSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLA 552
Query: 693 IAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
+AFG+ +TP +P+ +VK+ +C DCH+ IK I+ + R I VRDS R H F G C+C
Sbjct: 553 VAFGIASTPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCG 612
Query: 753 DF 754
D+
Sbjct: 613 DY 614
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 216/415 (52%), Gaps = 20/415 (4%)
Query: 59 FQEALSVLTE-GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
+EA+ +L + G T L++ C K+L IH + + F+ LV+
Sbjct: 25 IREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVD 84
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+YGKCG++ EA++VFD + NV SWT L++G+VQ+ + AI +F M + G P V
Sbjct: 85 MYGKCGSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVA 144
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L + +C + +++ G++IH+ + D N++ ++Y CGS+ A F R+
Sbjct: 145 LLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFAVFTRMP 204
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
EKNV+SW+T+I A +N A + L FF M EG++ + T S+ ++ +L +G
Sbjct: 205 EKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGKA 264
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
+H + G +++ V N+++ +Y KCG D+A+ +FD M N+V+WNAM+A + Q
Sbjct: 265 LHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAAYGQ--- 321
Query: 358 LAKDDLSAHNGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
NG + EAL++F ++ G++P+ TF +IL CS + H + ++
Sbjct: 322 ---------NGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVS-HFVEMR 371
Query: 417 TGF---LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
F +V G L++M + G++E A + M + WTS++ H
Sbjct: 372 QDFGITPREVHFG-CLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTH 425
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 339/617 (54%), Gaps = 33/617 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V S Y S+L+ C L +HAH +K+ D V T +++Y KC NM++AQ +
Sbjct: 237 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 296
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FDN +N S+ ++I+GY Q A+ +F ++ +G ++L AC+ ++ +
Sbjct: 297 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 356
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QI+ +K D V N+ +Y C +L A + F+ +R ++ +SW +I A
Sbjct: 357 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 416
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG+ + L F ML I+P+EFT SI C T SL G ++HS +K G ASN
Sbjct: 417 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNS 475
Query: 312 RVRNSIMYLYLKCGLVDEAQKL----------------FDGMSHVNL----VTWNAMIAG 351
V S++ +Y KCG+++EA+K+ + M + L V+WN++I+G
Sbjct: 476 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 535
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ M + ++D A +F+++ G+ PD +T++++L C+ L + G+QIH
Sbjct: 536 YV-MKEQSED----------AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 584
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A +K SDV + + LV+MY KCG + + +F + R ++W +MI G+A+H
Sbjct: 585 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 644
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A+QLFE M+L ++PN VTF+ L AC++ G++ + L YF MM+++Y + P + HY +
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH-GNMELGFYAAEQLLKLKPKD 590
+D+ + G ++ A + I++M FE ++VIW + C H N+E+ A LL+L P+D
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 764
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L +++ AG WE V+ ++ R KL + SW+ +KD+++ F D HP+
Sbjct: 765 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRW 824
Query: 651 AEIFKVLDELVEKAKCF 667
EI++ L + + K F
Sbjct: 825 EEIYEELGLIYSEMKPF 841
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 241/491 (49%), Gaps = 23/491 (4%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
LG Q ++ G + T LLQ N + +A ++ + +D ++
Sbjct: 24 LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM----PLRDVVSWNKMI 79
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
N Y K +M +A F+ +P +VVSW S++SGY+QN + +I VF+DM G
Sbjct: 80 NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR 139
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L CS LE LG QIH VV+ + D ++L +Y+ +++ F I
Sbjct: 140 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EKN +SW+ +I C +N L+FF +M ++ S+ C + LR+G
Sbjct: 200 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 259
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+H+ +K +A++ VR + + +Y KC + +AQ LFD ++N ++NAMI G++Q
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ-- 317
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
G +AL +F +L SSG+ D + S + C+ + L +G QI+ L +K
Sbjct: 318 ---------EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+ DV V A ++MY KC + A RVF EM R +SW ++I + ++ L L
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKPVMDHYM--CLID 533
F ML + + P++ TF L AC+ +LGY E+ K + + LID
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACTGG-----SLGYGMEIHSSIVKSGMASNSSVGCSLID 483
Query: 534 MFVRLGCIEEA 544
M+ + G IEEA
Sbjct: 484 MYSKCGMIEEA 494
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 193/422 (45%), Gaps = 52/422 (12%)
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ ++ LGKQ HA+++ T V N L +Y+ SA F+++ ++V+SW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 245 TTVIGACG-------------------------------ENGEAVQGLRFFSKMLSEGIQ 273
+I +NGE+++ + F M EGI+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
+ T I VC + +G Q+H + +++G +++ ++++ +Y K E+ ++
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F G+ N V+W+A+IAG Q +N + AL F ++ ++S
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQ-----------NNLLSLALKFFKEMQKVNAGVSQSIYAS 244
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L C+ L L G Q+HA LK+ F +D +V TA ++MY KC ++ A +F
Sbjct: 245 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 304
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
S+ +MITG++ +AL LF ++ +G+ ++++ G AC+ + E L +
Sbjct: 305 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYG 364
Query: 514 MMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ IK + +C+ IDM+ + + EAF +M + V W+ IA +
Sbjct: 365 L-----AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQ 418
Query: 570 HG 571
+G
Sbjct: 419 NG 420
>gi|242041565|ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 206/592 (34%), Positives = 326/592 (55%), Gaps = 22/592 (3%)
Query: 172 YPTN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
YP N T L +C ++R G+Q+HA ++ D + L LY++CG ++ A
Sbjct: 59 YPYNHNNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVAR 118
Query: 231 KAFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGT 288
+ F+ + + NV W +I A +G + + +ML+ G ++P+ FT + C
Sbjct: 119 RLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAA 178
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+L L G +VH ++ +A+++ V ++ +Y KCG VDEA +FD + + V WN+M
Sbjct: 179 LLDLGAGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSM 238
Query: 349 IAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
IA Q NG EAL++ + + G+ P + T S ++ + AL +G
Sbjct: 239 IAACGQ------------NGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRG 286
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
++H + GF S + T+L++MY K G + A +F ++ R LISW +MI GF H
Sbjct: 287 RELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMH 346
Query: 468 SLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
+ A +LF M A V P+ +TFVG L+AC++ GMV EA F++M Y IKP++
Sbjct: 347 GHADHACELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQ 406
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY CL+D+ G +EA D IK M +P+ IW + GC+ H N+EL A +L++L
Sbjct: 407 HYTCLVDVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIEL 466
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P+D +Y +L +I+ +G+WE+ A V+ L L + SWI +K K + F D
Sbjct: 467 EPEDAGNYVLLSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDAS 526
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTP 701
HP+S EI++ L+ L GY + + D+E ++ HSE+LAIAFGL++TP
Sbjct: 527 HPRSDEIYEELERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTP 586
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
+ +LV K+ +C DCH IK+I+ + REII+RD R H FVNG C+C+D
Sbjct: 587 PGTKLLVTKNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKD 638
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 199/398 (50%), Gaps = 16/398 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
++Y ++L+ CV +++ +HA ++ +G D + T LV++Y CG + A+++FD
Sbjct: 64 NNYATILRSCVLSRAVRPGRQLHARLLVSGLGLDAVLATRLVDLYASCGLVSVARRLFDE 123
Query: 135 LP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIR 192
+P + NV W LI Y ++ E AI ++ +ML G+ P N T L AC++L +
Sbjct: 124 MPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGSMEPDNFTYPPVLKACAALLDLG 183
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
G+++H V++ D V L +Y+ CG ++ A F+ ++ + W ++I ACG
Sbjct: 184 AGREVHDRVMRTSWAADVFVCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACG 243
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NG + L M +EGI P TL S S +L G ++H G + G+ S +
Sbjct: 244 QNGRPAEALALCRNMAAEGIAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDK 303
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
++ S++ +Y K G V A+ LFD + H L++WNAMI G H A
Sbjct: 304 LKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICG-----------FGMHGHADHA 352
Query: 373 LSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALV 430
+F ++ N + + PD TF +L+ C+ +++ +++ L + + +V T LV
Sbjct: 353 CELFRRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLV 412
Query: 431 NMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
++ GR + AS V M + W +++ G H
Sbjct: 413 DVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIH 450
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 3/149 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N P +L ++ P + T VS + + +L +H + + G
Sbjct: 245 NGRPAEALALCRNMAAEGIAPTIVT--LVSAISAAADAGALPRGRELHGYGWRRGFGSQD 302
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-E 168
+ T L+++Y K G + A+ +FD L ++SW ++I G+ + + A +F M E
Sbjct: 303 KLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRMRNE 362
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQI 197
A P ++T L+AC+ ++ K++
Sbjct: 363 AQVMPDHITFVGVLSACNHGGMVQEAKEV 391
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 314/573 (54%), Gaps = 11/573 (1%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ +S Y+ +LQ C+ + L +IH+HI++ G + + T L+ Y K G A+KV
Sbjct: 35 LSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKV 94
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD +P NVVSWT+ ISGY +N + A+ VF M AG T G+ L AC+ L +
Sbjct: 95 FDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCL 154
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QIH + K + + V ++L L+S CG++ A F + E++V+SW VIG
Sbjct: 155 ERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGY 214
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
R F M+ EG+ P+ FTL S+ +L Q+H + I+LG+ S++
Sbjct: 215 AAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHI 274
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
+ S++ Y K + A L+ M +++++ A++ G+A+ ++ E
Sbjct: 275 DLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSR----------E 324
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
AL +F + M+ D TF ++L +C+ + +L G QIHAL +K DV G ALV+
Sbjct: 325 ALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVD 384
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY K G IE A+R F EM + +ISWTS+ITG+ H H+A+ L++ M G++PN +T
Sbjct: 385 MYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDIT 444
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+ L ACS++G+ E F M +Y I P +HY C+ID+F R G +EEA++ I KM
Sbjct: 445 FLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKM 504
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+ +PN +W + C +G+M LG AA LL++ P++ +Y +L I+ ++G W+
Sbjct: 505 NIKPNSSLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKAC 564
Query: 612 VVKNLTREEKLSETDDWSWIRIKDK-VYSFKPN 643
++NL L + +S I+ +K + +PN
Sbjct: 565 RMRNLMEYRSLKKIPGYSIIQSTNKNMRRLQPN 597
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 205/411 (49%), Gaps = 17/411 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+Q+AL V ++ G + +Y S+L+ C + L IH I K + FV +
Sbjct: 119 YQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIGNLFVQSA 178
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+++ KCGNME+A+ +F+ + +VVSW ++I GY + + +F M+ G P
Sbjct: 179 LVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVTPD 238
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
TLG+ L A S ++ QIH +++ + SL Y+ + SA +
Sbjct: 239 CFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYK 298
Query: 235 RIREKNVMSWTTVI-GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ +K+V+S+T ++ G + + + L F M ++ ++ T ++ +VC + SL
Sbjct: 299 SMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLS 358
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G Q+H+L IK + ++ N+++ +Y K G +++A + F M N+++W ++I G+
Sbjct: 359 IGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYG 418
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHA 412
+ H G EA++++ K+ G+KP+ TF S+L CS +G E +
Sbjct: 419 K-----------HGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNN 467
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG 463
+ K L + +++++ + G++E A + +M+ + S I G
Sbjct: 468 MITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILG 518
>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
Length = 739
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 227/711 (31%), Positives = 360/711 (50%), Gaps = 52/711 (7%)
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVV 141
+E N + L+ E +H ++ G D ++ LV VYGK G ++ A FD + NV
Sbjct: 42 RELRNARCLAAVEELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVF 101
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SWT +IS + QN A+ +F M G VTL L CSS++ + G+ IH V
Sbjct: 102 SWTIVISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRV 161
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGL 261
+ + D +GN+L ++YS CGSL A +F + ++V+SWTT+I A E+GE + +
Sbjct: 162 IA--AKKDVVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAV 219
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVC---GTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSI 317
F +M+SE + PNE + ++ C G +RV + + S G++L L V N++
Sbjct: 220 EIFWEMVSENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELD--KKLVVANTL 277
Query: 318 MYLYLKCGLVDEAQKLFDGMSHV--NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ Y +CG +A+++FD + H N V+W +MIA + + A G +
Sbjct: 278 IHTYGRCGSPSDARRVFDSLQHSARNAVSWASMIAAYTS-------NEQAKAGVELYQEM 330
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
+ S M P Y +L CS L AL+ G Q+H + GF ++ + A+VNMY K
Sbjct: 331 IQREESKKMDPVAYL--CVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCK 388
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG + A VF M R +I+W SM+ G+ H +ALQLFE L GV P+++TFV
Sbjct: 389 CGSLVEAREVFDGMKARNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTI 448
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
L ACS+AGMV + +F ++ ++ ++P +DHY+C++DM R G ++ A +++M
Sbjct: 449 LTACSHAGMVKPGVWHFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFS 508
Query: 556 NE----VIWSVFIAGCRRHGNMELG-----------------FYAAEQLLKLKPKDCESY 594
N V W +A C+ H +++ + LK
Sbjct: 509 NPADEFVPWMALLASCKVHTDVKRAARISSVLSAKKKKLLSSSSSGSGSWHLK-NSAAPL 567
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEK-----LSETDDWSWIRIKDKVYSFKPND-GLHP 648
ML +I+ A +WE++ V+N EE S S+I ++ ++ F LHP
Sbjct: 568 VMLSNIYAQAKKWEEMTGVRNEITEEWSKGMITSRQRGCSFIEVEGAIHEFVAGKLHLHP 627
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHSEKLAIAFGLLNTPIV 703
+ I + L E K GY S + D E A HSE++AIAFGL+
Sbjct: 628 EHKGIDSEMKRLEELIKSAGYVPDTSVVMHDVEEAEKEGVLHQHSERMAIAFGLMRGGSD 687
Query: 704 SPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ + VV + +C DCH +K+I+ REI+VRD++R H F +G C+C+D+
Sbjct: 688 TIVRVVNNLRICSDCHAAVKLISKTVGREILVRDTRRFHHFASGECSCQDY 738
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 115/253 (45%), Gaps = 9/253 (3%)
Query: 21 PSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRS-LGFQEALSVLTEGPKVQTSSYVS 79
PS + H+ S + +I ++E ++ + + + E K+ +Y+
Sbjct: 287 PSDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLC 346
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+L+ C + +L +H IV G + + +VN+Y KCG++ EA++VFD + N
Sbjct: 347 VLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARN 406
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+++W S++ GY Q+ P+ A+ +F G P +T T LTACS ++ G H
Sbjct: 407 MIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVW-HF 465
Query: 200 YVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRI-----REKNVMSWTTVIGACG 252
++ + SV + +C + G L++A + R+ + W ++ +C
Sbjct: 466 GSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCK 525
Query: 253 ENGEAVQGLRFFS 265
+ + + R S
Sbjct: 526 VHTDVKRAARISS 538
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 339/617 (54%), Gaps = 33/617 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V S Y S+L+ C L +HAH +K+ D V T +++Y KC NM++AQ +
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FDN +N S+ ++I+GY Q A+ +F ++ +G ++L AC+ ++ +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QI+ +K D V N+ +Y C +L A + F+ +R ++ +SW +I A
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG+ + L F ML I+P+EFT SI C T SL G ++HS +K G ASN
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNS 517
Query: 312 RVRNSIMYLYLKCGLVDEAQKL----------------FDGMSHVNL----VTWNAMIAG 351
V S++ +Y KCG+++EA+K+ + M + L V+WN++I+G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ M + ++D A +F+++ G+ PD +T++++L C+ L + G+QIH
Sbjct: 578 YV-MKEQSED----------AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A +K SDV + + LV+MY KCG + + +F + R ++W +MI G+A+H
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A+QLFE M+L ++PN VTF+ L AC++ G++ + L YF MM+++Y + P + HY +
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH-GNMELGFYAAEQLLKLKPKD 590
+D+ + G ++ A + I++M FE ++VIW + C H N+E+ A LL+L P+D
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L +++ AG WE V+ ++ R KL + SW+ +KD+++ F D HP+
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRW 866
Query: 651 AEIFKVLDELVEKAKCF 667
EI++ L + + K F
Sbjct: 867 EEIYEELGLIYSEMKPF 883
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 259/557 (46%), Gaps = 56/557 (10%)
Query: 22 SSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLL 81
+ SL L VS+ R ++ I R F L + V T+++ +
Sbjct: 2 AESLRLLHMTRSVVSFNRCLTEKISYR------RVPSFSYFTDFLNQVNSVSTTNFSFVF 55
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL-------------------------- 115
+EC + +L + HAH++ +G FV+ L
Sbjct: 56 KECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVV 115
Query: 116 -----VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+N Y K +M +A F+ +P +VVSW S++SGY+QN + +I VF+DM G
Sbjct: 116 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
T L CS LE LG QIH VV+ + D ++L +Y+ ++
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F I EKN +SW+ +I C +N L+FF +M ++ S+ C +
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
LR+G Q+H+ +K +A++ VR + + +Y KC + +AQ LFD ++N ++NAMI
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G++Q G +AL +F +L SSG+ D + S + C+ + L +G QI
Sbjct: 356 GYSQ-----------EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ L +K+ DV V A ++MY KC + A RVF EM R +SW ++I +
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKPVMDHYM 529
++ L LF ML + + P++ TF L AC+ +LGY E+ K + +
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTGG-----SLGYGMEIHSSIVKSGMASNSSV 519
Query: 530 --CLIDMFVRLGCIEEA 544
LIDM+ + G IEEA
Sbjct: 520 GCSLIDMYSKCGMIEEA 536
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 204/644 (31%), Positives = 342/644 (53%), Gaps = 42/644 (6%)
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
++W +I Y + ++ F + G P + L A + + L + +HA
Sbjct: 42 LAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA 101
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCG----------------------SLNSAIKAFNRIRE 238
V++ D N+L ++YS ++S K F+R+
Sbjct: 102 VIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPV 161
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
++V+SW TVI +NG + L +M E ++P+ FTL+SI + ++ G ++
Sbjct: 162 RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEI 221
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H I+ G+ ++ + +S++ +Y KC V+ + F +S+ + ++WN++IAG Q
Sbjct: 222 HGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQ---- 277
Query: 359 AKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
NG + L F ++ +KP +FSS++ C+ L AL G+Q+HA ++
Sbjct: 278 --------NGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRL 329
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVF--VEMSTRTLISWTSMITGFANHSLSHQALQ 475
GF + + ++L++MY KCG I+ A +F +EM R ++SWT++I G A H + A+
Sbjct: 330 GFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVS 389
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
LFE+ML+ GV+P V F+ L ACS+AG+V E YF MQ+++ + P ++HY + D+
Sbjct: 390 LFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLL 449
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYA 595
R G +EEA+DFI M EP +WS +A CR H N+EL ++L + P + ++
Sbjct: 450 GRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHV 509
Query: 596 MLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFK 655
++ +I+ +A RW D A ++ R+ L +T SWI + +KV++F D HP +I +
Sbjct: 510 IMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINE 569
Query: 656 VLDELVEKAKCFGY--KQQESFELTDEESASVY---HSEKLAIAFGLLNTPIVSPILVVK 710
L+ L+E+ + GY E DEE HSE+LAIAFG+++T + I V+K
Sbjct: 570 ALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIK 629
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH IK + + REIIVRD+ R H F NG C+C D+
Sbjct: 630 NIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDY 673
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 216/432 (50%), Gaps = 37/432 (8%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG------------- 123
+ SLL+ K + A+ +HA +++ G H D + L+N+Y K
Sbjct: 79 FPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQAR 138
Query: 124 ---------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ +K+FD +P +VVSW ++I+G QN E A+++ +M + P
Sbjct: 139 HNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPD 198
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ TL + L + ++ GK+IH Y +++ + D +G+SL +Y+ C + ++ AF+
Sbjct: 199 SFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFH 258
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++ +SW ++I C +NG QGL FF +ML E ++P + + +S+ C + +L +
Sbjct: 259 LLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNL 318
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG--MSHVNLVTWNAMIAGH 352
G Q+H+ I+LG+ N + +S++ +Y KCG + A+ +F+ M ++V+W A+I G
Sbjct: 319 GKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGC 378
Query: 353 AQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIH 411
A H +A+S+F ++ G+KP F ++LT CS +++G + +
Sbjct: 379 AM-----------HGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFN 427
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHSLS 470
++ G + A+ ++ + GR+E A M S W++++ H
Sbjct: 428 SMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNI 487
Query: 471 HQALQLFEDMLL 482
A ++ +LL
Sbjct: 488 ELAEKVVNKILL 499
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 26/267 (9%)
Query: 55 RSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+ LGF + L E K S+ S++ C + +L+ + +HA+I++ G + F+ +
Sbjct: 283 QGLGFFRRM--LKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASS 340
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRI--NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
L+++Y KCGN++ A+ +F+ + ++VSWT++I G + A+ +F +ML G
Sbjct: 341 LLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVK 400
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG----NSLCSLYSTCGSLNS 228
P V LTACS + G + Y Q + + G ++ L G L
Sbjct: 401 PCYVAFMAVLTACSHAGLVDEGWK---YFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEE 457
Query: 229 AIKAFNRIREKNVMS-WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A + + E+ S W+T++ AC + + +K+L + P G
Sbjct: 458 AYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILL--VDP------------G 503
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVR 314
M + + + ++S + A+ LRVR
Sbjct: 504 NMGAHVIMSNIYSAAQRWRDAAKLRVR 530
>gi|296089786|emb|CBI39605.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 321/584 (54%), Gaps = 34/584 (5%)
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG-----SLNSAIKAFNRIR 237
T C++ S+ KQ HA +++ D+ + SL Y+ S S+++ F+ +R
Sbjct: 62 TQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVR 119
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+ NV W +I C EN E + + + +M+ +PN++T ++ C + G Q
Sbjct: 120 KPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ 179
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMM 356
VH+ +K G + + +S + +Y G + EA+++ D V+ V M M
Sbjct: 180 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAV---CMPDRKGCFM 236
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
EAL IF ++ ++P + S+L+ C+ L AL+QG IH +
Sbjct: 237 --------------EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKR 282
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
D V+GT+LV+MY KCGRI+ A VF +MS + + SW +MI G A H + A+ L
Sbjct: 283 NSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDL 342
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F M + PN++TFVG L AC++ G+V + L F M+KEY ++P ++HY C++D+
Sbjct: 343 FSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLG 399
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G + EA + + EP +W + CR+HGN+ELG + LL+L+P++ Y +
Sbjct: 400 RAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTL 459
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI-KDKVYSFKPNDGLHPQSAEIFK 655
L +I+ AGRWE+V V+ L +E + T S I + + +V+ F DG HPQ +I++
Sbjct: 460 LSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQ 519
Query: 656 VLDELVEKAKCFGYKQQES---FELTDE--ESASVYHSEKLAIAFGLLNTPIVSPILVVK 710
+LD++ E+ + GY+ S F++ +E E+A HSEKLAI FGL+NT + I +VK
Sbjct: 520 MLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIVK 579
Query: 711 STTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +C DCH+ K+I+ + REIIVRD R H F NG C+C+DF
Sbjct: 580 NLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDF 623
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 192/409 (46%), Gaps = 29/409 (7%)
Query: 67 TEGPKVQTSSYVSLLQ-ECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-- 123
TE K+ + + LL +C SL + + HA I++TG QD ++ LV Y
Sbjct: 46 TETSKLSHKAILHLLNTQCTT--SLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTN 103
Query: 124 ---NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
+ E + +VFD + + NV W +I ++N++P AI ++ +M+ A P T
Sbjct: 104 RYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPA 163
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L ACS + G Q+HA++VK+ D + +S +Y++ G L A + + +
Sbjct: 164 VLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD-----D 218
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+ G ++ L F +M E I+P +F L S+ S C + +L G +H+
Sbjct: 219 KGGEVDAVCMPDRKGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHT 278
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
+ + + S++ +Y KCG +D A ++F+ MS+ + +WNAMI G
Sbjct: 279 YAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGG--------- 329
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGF 419
L+ H +A+ +FSK++ + P+ TF +L C+ +++G I +++ + G
Sbjct: 330 --LAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGV 384
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
+ +V++ + G + A +V + T T W +++ H
Sbjct: 385 EPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 433
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 143/304 (47%), Gaps = 14/304 (4%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N+EP +++ + V P T Y ++L+ C + ++ +HAH+VK G D
Sbjct: 136 NNEPFKAILLYYEMMVAHFRPNKYT--YPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDG 193
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+++ + +Y G + EA+++ D+ ++ V +++ A+ +F M +
Sbjct: 194 HILSSAIRMYASFGRLVEARRILDDKGGEVDAVCMPDRKGCFME------ALEIFHQMQK 247
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P L + L+AC++L ++ G+ IH Y + + D +G SL +Y+ CG ++
Sbjct: 248 EKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDL 307
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F ++ K V SW +IG +G A + FSKM I PNE T + + C
Sbjct: 308 AWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAH 364
Query: 289 MLSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWN 346
++ G + +S+ + G + I+ L + GL+ EA+K+ + + W
Sbjct: 365 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 424
Query: 347 AMIA 350
A++
Sbjct: 425 ALLG 428
>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
Length = 600
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 318/580 (54%), Gaps = 18/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN- 240
L C+ +++ GK++H+ +VK D + N L +Y CG + A F++I+EKN
Sbjct: 31 LKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNA 90
Query: 241 -VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
V+SW +IGA +NG + L F M EG+ N+ TL + C ++ S G VH
Sbjct: 91 DVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVH 150
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
++ + S+ V S++ ++ KC VD A+ +FD + NLVTWN M+A ++Q
Sbjct: 151 AIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCK 210
Query: 360 KDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF 419
K A+ +F ++ G++PD TF +I+ C+ L A +G +H +G
Sbjct: 211 K-----------AIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGI 259
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFED 479
DV +GTA+++ Y KCGR++ A +F + + ++W++++ +A + +A++L+ +
Sbjct: 260 PMDVALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHE 319
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLG 539
M+ G+ N +TF+G L ACS+AG + + YF M +++ + PV +HY+ LID+ R G
Sbjct: 320 MVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSG 379
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
++ + D I M +EP+ W + CR HG+++ G AE + +L P+D Y +L +
Sbjct: 380 QLQLSEDLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSN 439
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ S GR ++ + R +++ S I +KD+V+ F LHPQ I ++
Sbjct: 440 LYSSTGRMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIER 499
Query: 660 LVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
L + K GY E ++E YHSE+LAIAFGL++TP + + +VK+ +
Sbjct: 500 LKARVKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRV 559
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCH +K I+ + R+I+VRD+ R H F NG C+C D+
Sbjct: 560 CFDCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDY 599
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 178/330 (53%), Gaps = 15/330 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ S+YV LL++C + K+L + +H+ +VK G D + L+ +YGKCG + EA+ VF
Sbjct: 23 EISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVF 82
Query: 133 DNLPRIN--VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
D + N V+SW +I Y QN + A+H+F M G VTL A+ AC+SL S
Sbjct: 83 DQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPS 142
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
G+ +HA V + E DT VG SL +++ C ++++A F+ + KN+++W ++
Sbjct: 143 EEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAV 202
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+N + + ++ F M EG+QP+ T +I C + + G VH G +
Sbjct: 203 YSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMD 262
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-G 369
+ + ++M+ Y KCG +D A+ +FD + N VTW+A++A +AQ NG
Sbjct: 263 VALGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQ------------NGYE 310
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICS 399
TEA+ ++ ++ G++ + TF +L CS
Sbjct: 311 TEAIELYHEMVQGGLEVNGITFLGLLFACS 340
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 7/255 (2%)
Query: 38 QRSGSKLIQLNG--NSEPVRSLGFQEALSVLT----EGPKVQTSSYVSLLQECVNRKSLS 91
Q + +I NG + LG +EAL + EG + ++ + C + S
Sbjct: 86 QEKNADVISWNGIIGAYTQNGLG-KEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
I+HA V D V T LVN++GKC N++ A+ VFD+LPR N+V+W ++++ Y
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
QN Q + AI VF M G P VT T + AC++L + G+ +H + D +
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
+G ++ Y CG L++A F+ + +KN ++W+ ++ A +NG + + + +M+ G
Sbjct: 265 LGTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGG 324
Query: 272 IQPNEFTLTSISSVC 286
++ N T + C
Sbjct: 325 LEVNGITFLGLLFAC 339
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 385 KPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
+ ++ T+ +L C+ AL +G+++H+ +K G+ SD ++ L+ MY KCG I A
Sbjct: 21 REEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARS 80
Query: 445 VFVEMSTRT--LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN- 501
VF ++ + +ISW +I + + L +AL LF+ M L GV NQVT + A+ AC++
Sbjct: 81 VFDQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASL 140
Query: 502 ----AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA---FDFIKKMDFE 554
G + A+ + ++ + + L++MF + ++ A FD + +
Sbjct: 141 PSEEEGRIVHAIAVDKRLESDTMVGT------SLVNMFGKCKNVDAARAVFDSLPR---- 190
Query: 555 PNEVIWSVFIA 565
N V W+ +A
Sbjct: 191 KNLVTWNNMVA 201
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 96/200 (48%), Gaps = 6/200 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + ++++++ C + + ++H I +G D + T +++ YGKCG ++
Sbjct: 222 EGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDN 281
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ +FD+L + N V+W+++++ Y QN AI ++ +M++ G +T L ACS
Sbjct: 282 ARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACS- 340
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGN---SLCSLYSTCGSLNSAIKAFNRIR-EKNVMS 243
+ R + +V + V +L L G L + N + E + +
Sbjct: 341 -HAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSA 399
Query: 244 WTTVIGACGENGEAVQGLRF 263
W ++GAC +G+ +G R
Sbjct: 400 WLALLGACRMHGDVDRGARI 419
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 201/608 (33%), Positives = 318/608 (52%), Gaps = 52/608 (8%)
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC +L +R Q+HA+ D N L Y+ G L +A + F RI +NVMS
Sbjct: 115 ACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMS 171
Query: 244 WTTVIGACGENGE---------------------AVQGLR----------FFSKMLSEGI 272
W + G +NG+ V GL FF M EG+
Sbjct: 172 WNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM 231
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P+EF L S+ C + + G QVH+ ++ G ++ V +S+ ++Y++CG + E +
Sbjct: 232 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEA 291
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTF 391
+ + +++V+ N +IAG Q NG +E AL F + S G+ D+ TF
Sbjct: 292 VLRMLPSLSIVSCNTIIAGRTQ------------NGDSEGALEYFCMMRSVGVAADVVTF 339
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S ++ CS L AL QG+QIH +K G V V T LV+MY +CG + + RVF
Sbjct: 340 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 399
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
++MI+ + H +A++LF+ M+ G P+ VTF+ L ACS++G+ E +
Sbjct: 400 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 459
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FE+M K Y ++P + HY C++D+ R GC++EA I M P+ VIW ++ C+
Sbjct: 460 FELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQK 519
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
N ++ A+++++L P D SY +L +I ++ RW DV+ V+ R+ + + SW+
Sbjct: 520 NFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWV 579
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVY 686
+K ++ F D HP+ EI + L+E++ K + GY S L D +E + +
Sbjct: 580 ELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSH 639
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLAIAF L+ P PI V+K+ +C DCH IK+++ +T REI+VRD R H F +
Sbjct: 640 HSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKD 699
Query: 747 GHCTCRDF 754
G C+CRD+
Sbjct: 700 GRCSCRDY 707
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 189/419 (45%), Gaps = 47/419 (11%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ L + C ++L +HA +G+ D F L+ Y G++ A+++F+ +P
Sbjct: 109 FSHLFRAC---RALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165
Query: 137 RINVVSWTSLISGYVQNSQ-----------PEL--------------------AIHVFLD 165
R NV+SW L GY++N PE ++ FLD
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G +P LG+ C+ L + G+Q+HAYVV+ + D VG+SL +Y CG
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 285
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L + +++S T+I +NG++ L +F M S G+ + T S S
Sbjct: 286 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 345
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C + +L G Q+H +K G + V ++++Y +CG + +++++F G +
Sbjct: 346 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 405
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+AMI+ + H G +A+ +F ++ + G +P TF ++L CS E
Sbjct: 406 SAMISAYG-----------FHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 454
Query: 406 QGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMIT 462
+G L KT G V T +V++ + G ++ A + + M T + W ++++
Sbjct: 455 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 513
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 7/302 (2%)
Query: 56 SLGFQEA-----LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+LGF E L + EG S+ + C + + +HA++V++G +D
Sbjct: 212 NLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMC 271
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V + L ++Y +CG ++E + V LP +++VS ++I+G QN E A+ F M G
Sbjct: 272 VGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVG 331
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
VT +A+++CS L ++ G+QIH V+K + V L +YS CG L +
Sbjct: 332 VAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSE 391
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F + + +I A G +G + + F +M++ G +P++ T ++ C
Sbjct: 392 RVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSG 451
Query: 291 SLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAM 348
G L K G +++ ++ L + G +DEA+ L M + V W +
Sbjct: 452 LKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTL 511
Query: 349 IA 350
++
Sbjct: 512 LS 513
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 324/590 (54%), Gaps = 22/590 (3%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN--SLCSLYSTCGSLNSAI 230
P + ++ + + C+SL + KQI AY +K + T + + C+ T S++ A
Sbjct: 33 PPSSSILSLIPKCTSLREL---KQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAH 89
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F++I + +++ + T+ + ++ + S++L G+ P+++T +S+ C +
Sbjct: 90 RMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLK 149
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
+L G Q+H L +KLG N+ V +++ +Y C VD A+++FD + +V +NA+I
Sbjct: 150 ALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIIT 209
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
A+ ++ EAL++F +L SG+KP T L+ C+ L AL+ G I
Sbjct: 210 SCAR-----------NSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWI 258
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H K GF V V TAL++MY KCG ++ A VF +M R +W++MI +A H
Sbjct: 259 HEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHG 318
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
QA+ + +M A V+P+++TF+G L ACS+ G+V E YF M EY I P + HY C
Sbjct: 319 SQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGC 378
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
+ID+ R G +EEA FI ++ +P ++W ++ C HGN+E+ +++ +L
Sbjct: 379 MIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDDSH 438
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
Y +L ++ GRW+DV ++ + ++ + S I + + V+ F DG+H S
Sbjct: 439 GGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIEVNNVVHEFFSGDGVHSTS 498
Query: 651 AEIFKVLDELVEKAKCFGYKQQESF----ELTDEESASV--YHSEKLAIAFGLLNTPIVS 704
+ LDELV++ K GY S ++ DEE V YHSEKLAI +GLLNTP +
Sbjct: 499 TILHHALDELVKELKLAGYVPDTSLVFYADIEDEEKEIVLRYHSEKLAITYGLLNTPPGT 558
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I VVK+ +C DCHN K I+ + R+II+RD +R H F +G C+C D+
Sbjct: 559 TIRVVKNLRVCVDCHNAAKFISLIFGRQIILRDVQRFHHFKDGKCSCGDY 608
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 211/400 (52%), Gaps = 22/400 (5%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNV---YGKCGNMEEAQ 129
+SS +SL+ +C + + L I A+ +KT HQ+ V+T L+N +M+ A
Sbjct: 35 SSSILSLIPKCTSLRELKQ---IQAYTIKT--HQNNPTVLTKLINFCTSNPTIASMDHAH 89
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
++FD +P+ ++V + ++ GY + P AI + +L +G P + T + L AC+ L+
Sbjct: 90 RMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLK 149
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
++ GKQ+H VK D+ V +L ++Y+ C +++A + F++I E V+++ +I
Sbjct: 150 ALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIIT 209
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+C N + L F ++ G++P + T+ S C + +L +G +H K G+
Sbjct: 210 SCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQ 269
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++V +++ +Y KCG +D+A +F M + W+AMI +A H G
Sbjct: 270 YVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYA-----------THGHG 318
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTA 428
++A+S+ ++ + ++PD TF IL CS +E+G E H++T + G + +
Sbjct: 319 SQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGC 378
Query: 429 LVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANH 467
++++ + GR+E A + E+ + T I W ++++ ++H
Sbjct: 379 MIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSH 418
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 155/301 (51%), Gaps = 4/301 (1%)
Query: 52 EPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
+P+R++ VL G ++ SLL+ C K+L + +H VK G + +V
Sbjct: 115 DPLRAILLCS--QVLCSGLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYV 172
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
L+N+Y C +++ A++VFD + VV++ ++I+ +NS+P A+ +F ++ E+G
Sbjct: 173 CPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGL 232
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
PT+VT+ AL++C+ L ++ LG+ IH YV K + V +L +Y+ CGSL+ A+
Sbjct: 233 KPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVS 292
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F + ++ +W+ +I A +G Q + +M +QP+E T I C
Sbjct: 293 VFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGL 352
Query: 292 LRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
+ G + HS+ + G +++ ++ L + G ++EA K D + + W ++
Sbjct: 353 VEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLL 412
Query: 350 A 350
+
Sbjct: 413 S 413
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 292/508 (57%), Gaps = 25/508 (4%)
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+ P+ FT + + C + + G +H L KLG+ SNL ++N I+ LY CG + +A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDL--------------AKDDLSAHNG------GTE 371
LF+ M + VTWN +IA A+ D+ + S +G E
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F KL ++P+ T S+L C+ L L+ G +H + K+GF +V V L++
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
MY KCG +E A RVF EM RT++SW++MI G A H + +AL LF +M+ GV+PN VT
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+G L ACS+ G++ E +F M +Y + P ++HY C++D+F R G +EEA +FI M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+PN V+W + GC+ H N++L A + L +L P + Y ++ +I+ A RWED A
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
V+ L ++ + +T WS I + V+ F D HPQ+ +I K+ D+L+ K K GY
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAP 425
Query: 672 QESFELTD----EESASVY-HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
+ S L D E+ +Y HSEKLA+ FGL+ TP +PI ++K+ +C DCH +KII+
Sbjct: 426 KTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNLRVCEDCHAALKIIS 485
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ +REIIVRD R H F +G C+CRDF
Sbjct: 486 GIVSREIIVRDRNRFHCFRDGQCSCRDF 513
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 35/315 (11%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T S+V L+ C+ + N + IH K G + F+ ++N+YG CG M +A
Sbjct: 8 PDTFTCSFV--LKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 130 KVFDNLPR-------------------------------INVVSWTSLISGYVQNSQPEL 158
+F+ +P+ NV SWTS+ISG+VQ +P
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
AI +F+ + + P VT+ + L AC+ L + LG+ +H Y K + + V N+L
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFT 278
+Y CG L +A + F + E+ V+SW+ +I +G+A + L FS+M+ G++PN T
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 279 LTSISSVCGTMLSLRVGAQVH-SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
+ C M + G + S+ G + ++ L+ + GL++EA + M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 338 S-HVNLVTWNAMIAG 351
N V W A++ G
Sbjct: 306 PIKPNGVVWGALLGG 320
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 158/344 (45%), Gaps = 47/344 (13%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P T L AC L + GK IH K + + N + +LY CG + A+
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 233 FN-------------------------------RIREKNVMSWTTVIGACGENGEAVQGL 261
F R+ KNV SWT++I + G+ + +
Sbjct: 68 FEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAI 127
Query: 262 RFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLY 321
F K+ E ++PNE T+ S+ + C + L +G VH K G+ N+ V N+++ +Y
Sbjct: 128 DLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMY 187
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
+KCG ++ A+++F M +V+W+AMIAG L+ H EAL +FS++
Sbjct: 188 VKCGCLENARRVFYEMEERTVVSWSAMIAG-----------LAMHGQAEEALCLFSEMIK 236
Query: 382 SGMKPDLYTFSSILTICSRLVALEQGEQIHA-LTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G+KP+ TF +L CS + +++G + A +T G + + +V+++ + G +E
Sbjct: 237 LGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLE 296
Query: 441 RASRVFVEMSTR-TLISWTSMITGFANH---SLSHQALQLFEDM 480
A + M + + W +++ G H L+ +A++ ++
Sbjct: 297 EAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSEL 340
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E + + VS+L C + L I+H + K+G ++ V L+++Y KCG +E
Sbjct: 136 EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLEN 195
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A++VF + VVSW+++I+G + Q E A+ +F +M++ G P VT L ACS
Sbjct: 196 ARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSH 255
Query: 188 LESIRLGKQIHA-----YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NV 241
+ I G++ A Y V Q E V L+S G L A + + K N
Sbjct: 256 MGLIDEGRRFFASMTADYGVIPQIEHYGCV----VDLFSRAGLLEEAHEFILSMPIKPNG 311
Query: 242 MSWTTVIGAC 251
+ W ++G C
Sbjct: 312 VVWGALLGGC 321
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 339/627 (54%), Gaps = 31/627 (4%)
Query: 159 AIHVFLDMLEAGNYPTN-VTLGTALTACSSLESIRLGKQIHAYVV--KYQTEDDTSVGNS 215
++H + +LE+ + V + C + +I +++H++++ + + N
Sbjct: 43 SLHKSIQLLESRELELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANL 102
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y CG L A + F + +NV +WT + A NG + L FF +M G +P+
Sbjct: 103 LIEMYGKCGRLPYARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPD 162
Query: 276 EFTLTSISSVCGTMLSLRV--GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
T + I + M + + G ++H G N+ V +++ +Y KCG +D+A+
Sbjct: 163 RVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAA 222
Query: 334 FDGMSHVNLVTWNAMIAGHA------QMMDLAKDDLSA--------------HNGGTEAL 373
F+ + N VTWNAM+ + + ++L ++ A H G +AL
Sbjct: 223 FEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQAL 282
Query: 374 SIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
++ + +++ + P TF +++ +C+ L AL+QG IHA T F ++++V ALV+M
Sbjct: 283 DLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHM 342
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
Y KCG ++ A VF M + ISW ++I+ +A H S QAL L+++M L GV+P +VTF
Sbjct: 343 YGKCGCLDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTF 402
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMD 552
VG L+ACS+ G+V + L YF MQ +++IKP + H+ C+ID+ R G + EA +K M
Sbjct: 403 VGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMP 462
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAV 612
+ N V W + C+ HG+++ G AA+Q++ P Y +L +I+ +AGRW+DV
Sbjct: 463 IQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEK 522
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
++ + + ++ SWI I D V+ F D HPQ EI+ L ++VE+ K GY
Sbjct: 523 IRKIMAARGVKKSPGKSWIEIGDVVHEFVSGDSSHPQGEEIYVELGKMVEEMKGLGYVPD 582
Query: 673 ES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
S E ++E V HSEKLAI +G + P S + +VK+ +C DCH K ++
Sbjct: 583 TSSVFHDLEEEEKEDLLVCHSEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSR 642
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+T R+I+VRD+ R H F NG C+CRD+
Sbjct: 643 ITGRKIVVRDAARFHLFENGSCSCRDY 669
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/484 (23%), Positives = 216/484 (44%), Gaps = 59/484 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIV--KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
Y +L++ C ++S A +H+HI+ + Q F+ L+ +YGKCG + A+++F++
Sbjct: 63 YAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFES 122
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL--TACSSLESIR 192
+P NV +WT ++ + N A+ F M ++G P VT L A +I
Sbjct: 123 MPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAID 182
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS--------- 243
G++IH Y + VG ++ S+Y CG L+ A AF ++ KN ++
Sbjct: 183 QGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYK 242
Query: 244 ----------------------WTTVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLT 280
W +I A ++G Q L + M + + P + T
Sbjct: 243 LDGRDREALELFREMHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFV 302
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
++ VC + +L+ G +H+ + +NL V N+++++Y KCG +DEA +F M
Sbjct: 303 TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLK 362
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+ ++WN +I+ +A H +AL ++ +++ G+KP TF +L+ CS
Sbjct: 363 DEISWNTIISSYAY-----------HGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSH 411
Query: 401 LVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWT 458
+ G + + + V ++++ + GR+ A V M + + W
Sbjct: 412 GGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 471
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV-GALAACSNAGMVYEALGYFEMMQK 517
S++ H + ++ + ++ ++V + G SN +Y A G ++ ++K
Sbjct: 472 SLLGACKTHGDLKRGVRAADQVV------DRVPWTSGGYVLLSN---IYAAAGRWKDVEK 522
Query: 518 EYKI 521
KI
Sbjct: 523 IRKI 526
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 12/197 (6%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
+ ++V+++ C +L IHA + T + V LV++YGKCG ++EA VF
Sbjct: 297 KQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVF 356
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
++ + +SW ++IS Y + + A+ ++ +M G PT VT L+ACS +
Sbjct: 357 HSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVA 416
Query: 193 LGKQIHAYVVKYQTEDDTSVGNS------LCSLYSTCGSLNSAIKAFNRIR-EKNVMSWT 245
G Y+ +DD + S + L G L A + + N + W
Sbjct: 417 DGLDYF-----YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWM 471
Query: 246 TVIGACGENGEAVQGLR 262
+++GAC +G+ +G+R
Sbjct: 472 SLLGACKTHGDLKRGVR 488
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 337/633 (53%), Gaps = 15/633 (2%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G + S ++ C + +HAH +K+ D V LV +Y K G
Sbjct: 142 SMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNG 201
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTAL 182
+++ +F+ + +++SW S+I+G+ Q A+ VF M+ E ++P G+A
Sbjct: 202 LVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAF 261
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC ++ S G+QIH +KY+ + D VG SL +Y+ +L+SA AF RI +++
Sbjct: 262 RACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLV 321
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SW +++ A G + L FS+M G++P+ T+ + C +L G +HS
Sbjct: 322 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 381
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+KLG ++ V NS++ +Y +C + A +F + ++VTWN+++ AQ
Sbjct: 382 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQ-------- 433
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
HN E L +FS LN S D + +++L+ + L E +Q+HA K G + D
Sbjct: 434 ---HNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDD 490
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDML 481
++ L++ Y KCG ++ A R+F M + R + SW+S+I G+A + +AL LF M
Sbjct: 491 RMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMR 550
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+RPN VTF+G L ACS G V E Y+ +M+ EY I P +H C++D+ R G +
Sbjct: 551 SLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKL 610
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA +FI +M FEP+ ++W +A + H +ME+G AAE +L + P +Y +L +I+
Sbjct: 611 TEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIY 670
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
++G W + A +K R + ++ SW+++K ++ F D HP+S EI+ +L+ +
Sbjct: 671 AASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFIVEDRSHPESEEIYAMLELIG 730
Query: 662 EKAKCFGYKQQESFE--LTDEESASVYHSEKLA 692
+ GY + S++ + D + +++ E LA
Sbjct: 731 MEMIKAGYVPKHSWKHAIVDHIDSDLFNEEMLA 763
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 268/530 (50%), Gaps = 38/530 (7%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-------DFFVMTFLVNVYGKCGNMEEAQ 129
Y +L+ C +SL +H H+V + S + + L+ +YG+C + A+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+VFD +P N VSW S+I+ +VQN + A+ +F ML +G LG+A+ AC+ L
Sbjct: 107 QVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELG 166
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G+Q+HA+ +K + D V N+L ++YS G ++ F RI++K+++SW ++I
Sbjct: 167 DVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226
Query: 250 ACGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ G ++ L+ F KM+ EG PNEF S CG + S G Q+H L IK
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+L V S+ +Y + +D A+ F + +LV+WN+++ + S
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAY-----------SVEGL 335
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+EAL +FS++ SG++PD T +L C AL G IH+ +K G DV V +
Sbjct: 336 LSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNS 395
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP- 487
L++MY +C + A VF E+ + +++W S++T A H+ + L+LF LL P
Sbjct: 396 LLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFS--LLNKSEPS 453
Query: 488 -NQVTFVGALAACSNAGMVYEALGYFEMMQK----EYKIKPVMDHYM--CLIDMFVRLGC 540
++++ L+A + LGYFEM+++ +K V D + LID + + G
Sbjct: 454 LDRISLNNVLSASAE-------LGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGS 506
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
+++A + M + WS I G + G + L ++ + L ++P
Sbjct: 507 LDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRP 556
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 219/732 (29%), Positives = 363/732 (49%), Gaps = 54/732 (7%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+T P + +++ ++L++ KSL++ + +HAHI++T + F ++V N+
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINL 60
Query: 126 EEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
A VF ++P + + + ++S+P I + + G + L A
Sbjct: 61 SYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S + ++ G ++H K T D V +Y++CG +N A F+ + ++V++W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T+I G + + F +M + P+E L +I S CG ++R ++ I+
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 305 --------------LGYAS-----------------NLRVRNSIMYLYLKCGLVDEAQKL 333
YA NL V +++ Y KCG +D+AQ +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD +LV W MI+ + + + EAL +F ++ SG+KPD+ + S
Sbjct: 301 FDQTEKKDLVCWTTMISAYVE-----------SDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+++ C+ L L++ + +H+ G S++ + AL+NMY KCG ++ VF +M R
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SW+SMI + H + AL LF M V PN+VTFVG L CS++G+V E F
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M EY I P ++HY C++D+F R + EA + I+ M N VIW ++ CR HG +
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
ELG +AA+++L+L+P + ++ +I+ RWEDV ++ + E+ + + S I
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHS 688
K + F D H QS EI+ LDE+V K K GY L D E ++HS
Sbjct: 590 NGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHS 649
Query: 689 EKLAIAFGLLN------TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
EKLA+ FGL+N I +VK+ +C DCH F K+++ + REIIVRD R H
Sbjct: 650 EKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFH 709
Query: 743 KFVNGHCTCRDF 754
+ NG C+CRD+
Sbjct: 710 CYKNGLCSCRDY 721
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/673 (30%), Positives = 354/673 (52%), Gaps = 27/673 (4%)
Query: 90 LSNAEIIHAHIV-KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLIS 148
L N I A V S D ++ T ++ Y + + A ++F +P +VVSW S+I
Sbjct: 6 LRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIK 65
Query: 149 GYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED 208
G + +A +F +M E + V+ T + I + + + Y + ++
Sbjct: 66 GCFDCADLTMARKLFDEMPER----SVVSWTTMINGFLQFGKIEVAEGLF-YKMPFR--- 117
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
D + NS+ Y G + ++ F + +NV+SWT++IG ++G + + L F +M+
Sbjct: 118 DIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMM 177
Query: 269 SEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
G++ P T + + C +L G Q+H+ KLGY+ + + +++ Y C
Sbjct: 178 GCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQ 237
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
++++ ++F G H+N+V W A++ G+ ++ +D AL +F ++ G+ P
Sbjct: 238 MEDSLRVFHGKLHMNVVIWTALVTGYG--LNCKHED---------ALKVFGEMMREGVLP 286
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ +F+S L C L AL+ G +IH +K G +DV VG +L+ MY +CG + +F
Sbjct: 287 NQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIF 346
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+S + ++SW S+I G A H AL F M+ + V P+++TF G L+ACS++GM
Sbjct: 347 KRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQ 406
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ F+ + + +DHY C++D+ R G +EEA + I+ M + N ++W V ++
Sbjct: 407 KGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSA 466
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
C H +E+ AA+ ++ L+P +Y +L +++ SA RW DV+ ++ ++ +++
Sbjct: 467 CTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREMKQRGITKQP 526
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-- 684
SWI IK F D HP S I++ L+ L K K GY + F L D E
Sbjct: 527 GRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELGYVPDQRFALHDVEDEQKE 586
Query: 685 ---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
YHSE+LAI FGL++T S I V+K+ +C DCH+ IK+I + R+IIVRDS R
Sbjct: 587 VMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVRRKIIVRDSTRF 646
Query: 742 HKFVNGHCTCRDF 754
H F++G C+C D+
Sbjct: 647 HHFMDGRCSCGDY 659
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 133/239 (55%), Gaps = 2/239 (0%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
+G SE L F++ + E K +S+Y ++ C N +L IHAH+ K G
Sbjct: 163 HGRSEEALGL-FRQMMGCGVE-VKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSF 220
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
D ++ L+ Y C ME++ +VF +NVV WT+L++GY N + E A+ VF +M+
Sbjct: 221 DAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMM 280
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
G P + +AL +C LE++ G++IH VK E D VGNSL +Y CG+LN
Sbjct: 281 REGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLN 340
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+ F RI +KN++SW +VI C ++G + L FF++M+ ++P+E T T + S C
Sbjct: 341 DGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDEITFTGLLSAC 399
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 28/266 (10%)
Query: 321 YLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLSAHNGGT 370
+L+ +DEA+ +FD +S ++ + MI G+A+ ++ D+ + N
Sbjct: 5 HLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMI 64
Query: 371 EA------LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+ L++ KL + + ++++++ + +E E L K F D+
Sbjct: 65 KGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAE---GLFYKMPF-RDIA 120
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+++ Y GR+E R+F EM R +ISWTSMI G H S +AL LF M+ G
Sbjct: 121 AWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCG 180
Query: 485 --VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGC 540
V+P T+ + AC+NA +Y+ + ++ +K+ D Y+ LI +
Sbjct: 181 VEVKPTSSTYCCVITACANASALYQGV---QIHAHVFKLGYSFDAYISAALITFYANCKQ 237
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAG 566
+E++ N VIW+ + G
Sbjct: 238 MEDSLRVFHG-KLHMNVVIWTALVTG 262
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 60 QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
++AL V + EG SS+ S L C ++L IH VK G D FV L
Sbjct: 270 EDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSL 329
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ +Y +CGN+ + +F + + N+VSW S+I G Q+ A+ F M+ + P
Sbjct: 330 IVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPDE 389
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAF 233
+T L+ACS + G+ + Y + ++ + + + C + G L A +
Sbjct: 390 ITFTGLLSACSHSGMSQKGRCLFKYFSENKSA-EVKLDHYACMVDILGRSGKLEEAEELI 448
Query: 234 NRIREK-NVMSWTTVIGAC 251
+ K N M W ++ AC
Sbjct: 449 RNMPVKANSMVWLVLLSAC 467
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 219/773 (28%), Positives = 388/773 (50%), Gaps = 44/773 (5%)
Query: 19 RQPSSSLATLKDKNHTVSYQR--SGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSS 76
R P +LK +V + S S+LI+ + R L +E L L P+ +
Sbjct: 367 RHPDMFYVSLKGDRDSVFLREAYSDSQLIEKD------RLLVIKEKLRALVSVPRFRRRG 420
Query: 77 YVSLLQECVN--RKSLSNAEIIHAHIVKTGSHQDF-FVMTFLVNVYGKCGNMEEAQKVFD 133
+ V + +++HA ++K + L++ Y G+ A VF
Sbjct: 421 APRSDADVVEGTDEQEHGIKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFY 480
Query: 134 -NLPRINVVSWTSLISGYVQNSQP-ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
LPR N + W S + + ++ + + VF ++ G + AL C+ + I
Sbjct: 481 VGLPR-NYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDI 539
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LG +IH ++K + D + +L + Y C L A + F+ + + W I
Sbjct: 540 WLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILN 599
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS-LRVGAQVHSLGIKLGYASN 310
++ + +G+ F KM ++ T+ + + L L +G + H ++ G+ +
Sbjct: 600 LQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCD 659
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA-------------QM-M 356
+ V S++ +Y+K + AQ +FD M + N+ WN++++G++ QM
Sbjct: 660 VYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEK 719
Query: 357 DLAKDDLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQ 406
+ K DL NG G EAL+ F+++ G+ P+ + + +L C+ L L++
Sbjct: 720 EGIKPDLVTWNGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQK 779
Query: 407 GEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFAN 466
G++IH L+++ GF+ DV V TAL++MY K ++ A +VF + +TL SW MI GFA
Sbjct: 780 GKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAI 839
Query: 467 HSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
L +A+ +F +M GV P+ +TF L+AC N+G++ E YF+ M +Y+I P ++
Sbjct: 840 FGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLE 899
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
HY C++D+ R G ++EA+D I M +P+ IW + CR H N++ AA+ L KL
Sbjct: 900 HYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKL 959
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P + +Y ++++++ RWED+ ++ L + WSWI+I +V+ F ++
Sbjct: 960 EPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKP 1019
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTP 701
HP + +I+ L +LV + K GY ++ + +++ + H+EKLAI +GL+
Sbjct: 1020 HPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMK 1079
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
PI V+K+T +C DCH+ K I+ + ARE+ +RD R H F G C+C DF
Sbjct: 1080 AGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDF 1132
>gi|145333540|ref|NP_001078415.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658995|gb|AEE84395.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 462
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 289/473 (61%), Gaps = 19/473 (4%)
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
M +R+G +HS+ I+ G+ S + V+NS+++LY CG V A K+FD M +LV WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 349 IAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
I G A+ NG E AL++++++NS G+KPD +T S+L+ C+++ AL G
Sbjct: 61 INGFAE------------NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 108
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
+++H +K G ++ L+++Y +CGR+E A +F EM + +SWTS+I G A +
Sbjct: 109 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 168
Query: 468 SLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD 526
+A++LF+ M G+ P ++TFVG L ACS+ GMV E YF M++EYKI+P ++
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIE 228
Query: 527 HYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
H+ C++D+ R G +++A+++IK M +PN VIW + C HG+ +L +A Q+L+L
Sbjct: 229 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQL 288
Query: 587 KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL 646
+P Y +L +++ S RW DV ++ + + + S + + ++V+ F D
Sbjct: 289 EPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKS 348
Query: 647 HPQSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTP 701
HPQS I+ L E+ + + GY Q S E ++E+A VYHSEK+AIAF L++TP
Sbjct: 349 HPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTP 408
Query: 702 IVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
SPI VVK+ +C DCH IK+++ + REI+VRD R H F NG C+C+D+
Sbjct: 409 ERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 461
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 159/305 (52%), Gaps = 16/305 (5%)
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ +RLG+ IH+ V++ V NSL LY+ CG + SA K F+++ EK++++W +V
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I ENG+ + L +++M S+GI+P+ FT+ S+ S C + +L +G +VH IK+G
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
NL N ++ LY +CG V+EA+ LFD M N V+W ++I G L+ +
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVG-----------LAVNG 169
Query: 368 GGTEALSIFSKLNSS-GMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVV 425
G EA+ +F + S+ G+ P TF IL CS +++G E + + +
Sbjct: 170 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+V++ + G++++A M + ++ W +++ H S L F + +
Sbjct: 230 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQ 287
Query: 485 VRPNQ 489
+ PN
Sbjct: 288 LEPNH 292
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 137/263 (52%), Gaps = 5/263 (1%)
Query: 93 AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQ 152
E IH+ ++++G +V L+++Y CG++ A KVFD +P ++V+W S+I+G+ +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
N +PE A+ ++ +M G P T+ + L+AC+ + ++ LGK++H Y++K +
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EG 271
N L LY+ CG + A F+ + +KN +SWT++I NG + + F M S EG
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN--SIMYLYLKCGLVDE 329
+ P E T I C ++ G + + ++ Y R+ + ++ L + G V +
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 245
Query: 330 AQKLFDGMS-HVNLVTWNAMIAG 351
A + M N+V W ++
Sbjct: 246 AYEYIKSMPMQPNVVIWRTLLGA 268
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 112/226 (49%), Gaps = 15/226 (6%)
Query: 60 QEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL++ TE G K + VSLL C +L+ + +H +++K G ++ L
Sbjct: 71 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 130
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA-GNYPT 174
+++Y +CG +EEA+ +FD + N VSWTSLI G N + AI +F M G P
Sbjct: 131 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 190
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+T L ACS ++ G + +Y+ E + L + G + KA+
Sbjct: 191 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK---KAY 247
Query: 234 NRIR----EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
I+ + NV+ W T++GAC +G++ L F+++ ++PN
Sbjct: 248 EYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPN 291
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/758 (27%), Positives = 376/758 (49%), Gaps = 100/758 (13%)
Query: 96 IHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IH ++K G + D V++ L+ YG+C +++ A K+FD +P+ + ++W ++ +Q+
Sbjct: 546 IHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSG 605
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E A+ +F M +G + T+ L CS+ E G+QIH YV++ E + S+ N
Sbjct: 606 NWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCN 665
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
SL +YS G L S+ K FN + ++N+ SW +++ + G + +M + G++P
Sbjct: 666 SLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKP 725
Query: 275 NEFTL--------------------------------TSISSVCGTMLS---LRVGAQVH 299
+ T +SISS+ + +++G +H
Sbjct: 726 DIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIH 785
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV---------------- 343
I+ ++ V +++ +Y+K G + A+ +FD M N+V
Sbjct: 786 GYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLK 845
Query: 344 -------------------TWNAMIAGHAQ----------MMDLAKDDLSAH-------- 366
TWN++++G+A + + K+ + +
Sbjct: 846 EAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAIL 905
Query: 367 -----NGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
NG L IF K+ G+ P+ T SS+L I L L G+++H+ LK
Sbjct: 906 SGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLT 965
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
D V TALV+MY K G ++ A+ +F + + L SW MI G+A + + +F M
Sbjct: 966 RDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAM 1025
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
L AG+ P+ +TF L+ C N+G+V E YF++M+ Y + P ++H C++++ R G
Sbjct: 1026 LEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGY 1085
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++EA+DFI+ M +P+ IW F++ C+ H ++EL A ++L L+P + +Y M++++
Sbjct: 1086 LDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINL 1145
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + RW DV ++N ++ D WSWI+I V+ F HP EI+ L +L
Sbjct: 1146 YSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEIYFELYKL 1205
Query: 661 VEKAKCFGYKQ-----QESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
V + K GY ++ +++E + H+EKLA+ +GL+ ++PI VVK+T +C
Sbjct: 1206 VSEMKKSGYMPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKGIAPIRVVKNTNLC 1265
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
DCH K I+ L REI++++ R+H F +G C+C +
Sbjct: 1266 SDCHTVAKYISVLRNREIVLQEGARVHHFRDGKCSCNN 1303
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 222/509 (43%), Gaps = 62/509 (12%)
Query: 97 HAHIVKTGSHQDF-FVMTFLVNVYGKCGNMEEAQKVFD-NLPRINVVSWTSLISGYVQ-N 153
HA ++K + F+ L+ Y + G A VF PR N VSW +
Sbjct: 444 HARMMKLIDRFELEFISKCLITRYLEFGEFGYASAVFFLGFPR-NQVSWRDFLEKAEDFG 502
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTED-DTSV 212
+ + F+ + G V L C+ L LG IH ++K ++ DT V
Sbjct: 503 VEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRV 562
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
++L Y C SL+ A K F+ + +++ ++W ++ ++G + ++ F M G
Sbjct: 563 VSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGA 622
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
+ + T+ + VC G Q+H ++LG+ SN+ + NS++ +Y + G ++ ++K
Sbjct: 623 KAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRK 682
Query: 333 LFDGMSHVNLVTWNAMIAGHAQM--MDLA------------KDDLSAHNG---------- 368
+F+ M NL +WN++++ + ++ +D A K D+ N
Sbjct: 683 VFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKAL 742
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+A+++ ++ +G+KP+ + SS+L ++ G+ IH ++ DV V T
Sbjct: 743 SRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETT 802
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY K G + A VF M + +++W S+I+G + L +A L M G++ N
Sbjct: 803 LIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSN 862
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VT+ ++ + G +AL M
Sbjct: 863 AVTWNSLVSGYATWGKTEKALAVVGKM--------------------------------- 889
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
KK EPN V W+ ++GC ++GN G
Sbjct: 890 KKNGVEPNVVSWTAILSGCSKNGNFGNGL 918
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
G + L + EG +++ SLL+ L + + +H+ +K +D V T LV+
Sbjct: 917 GLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVD 976
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y K G+++ A ++F + + SW +I GY + E I VF MLEAG P +T
Sbjct: 977 MYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAIT 1036
Query: 178 LGTALTACSSLESIRLG 194
+ L+ C + +R G
Sbjct: 1037 FTSVLSVCKNSGLVREG 1053
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 338/617 (54%), Gaps = 40/617 (6%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G V S Y S+L+ C L +HAH +K+ +D V T +++Y KC NM++A
Sbjct: 277 GVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDA 336
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
Q++FD +N+ S+ ++I+GY Q A+ +F + ++ ++L AL AC+++
Sbjct: 337 QRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATV 396
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
+ + G Q+H K + V N+ +Y C +L+ A + F+ + K+ +SW +I
Sbjct: 397 KGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAII 456
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A +N E + L ML G++P+E+T S+ C SL G ++H+ +KLG A
Sbjct: 457 AAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGD-SLNHGMEIHTTIVKLGMA 515
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKL----FDGMSHVN----------------------- 341
SN + +S++ +Y KCG++DEA+K+ F G+ N
Sbjct: 516 SNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEM 575
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
+V+WNA+I+G+ M ++D A F+++ G+ PD +T+S++L C+ L
Sbjct: 576 IVSWNAIISGYV-MRKQSED----------AQRFFNRMMEMGITPDKFTYSTVLDTCANL 624
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
++ G+QIHA +K DV + + LV+MY KCG + + +F + R ++W +MI
Sbjct: 625 ASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMI 684
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
G+A+H + +A++LFE M+L + PN TFV L AC++ G+V L YF MM+KEY +
Sbjct: 685 CGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGL 744
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR-RHGNMELGFYAA 580
P ++HY ++D+ + G +E+A + I++M FE ++VIW ++ C+ N+E AA
Sbjct: 745 DPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAA 804
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
LL+L P+D +Y +L +I+ AG W+ + ++ R +KL + SW+ I+D+ ++F
Sbjct: 805 NALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEIRDEFHTF 864
Query: 641 KPNDGLHPQSAEIFKVL 657
D HP+ EI+ L
Sbjct: 865 LVGDKAHPRWKEIYNGL 881
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 256/518 (49%), Gaps = 56/518 (10%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
SV E P +++ + +EC +++ + HAH++ +G FV L+ +Y CG
Sbjct: 39 SVNHEKPATSVANFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCG 98
Query: 124 NMEEAQKVFDNLP-------------------------------RINVVSWTSLISGYVQ 152
N+ A K+FD +P +VVSW S++SG++Q
Sbjct: 99 NLGYATKLFDGMPLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQ 158
Query: 153 NSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
+ ++ VF++M +G N + L CS LE+ +LG QIH ++ + D
Sbjct: 159 TGENLESVKVFIEMGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVS 218
Query: 213 GNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI 272
G++L +Y+ C L+ + F + +KN +SW+ +I C +N GL+ F +M G+
Sbjct: 219 GSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGV 278
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
++ S+ C T+ LR+G Q+H+ +K + + VR + + +Y KC + +AQ+
Sbjct: 279 GVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQR 338
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
LFD ++NL ++NAMI G++Q KD+ G AL +F KL+ S + D + S
Sbjct: 339 LFDMSENLNLQSYNAMITGYSQ-----KDN------GFRALLLFRKLSKSSLGFDEISLS 387
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
L C+ + L +G Q+H L K+ F ++ V A ++MY KC ++ A RVF EM +
Sbjct: 388 GALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRK 447
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS----NAGMVYEA 508
+SW ++I + + L + ML +G+ P++ TF L AC+ N GM
Sbjct: 448 DAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSLNHGM---- 503
Query: 509 LGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA 544
E+ K+ + Y+ L+DM+ + G I+EA
Sbjct: 504 ----EIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEA 537
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 155/591 (26%), Positives = 282/591 (47%), Gaps = 64/591 (10%)
Query: 35 VSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAE 94
VS+ S +Q N E V+ + + G + S+ +L+ C ++
Sbjct: 147 VSWNSMLSGFLQTGENLESVKVF-----IEMGRSGVEFDNKSFSVILKVCSILENYKLGT 201
Query: 95 IIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IH ++ G D + L+++Y KC ++E+ VF +P+ N +SW+++I+G VQN+
Sbjct: 202 QIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNN 261
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
+ + +F +M + G + + L +C++L +RLG Q+HA+ +K D V
Sbjct: 262 FLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRT 321
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP 274
+ +Y+ C ++ A + F+ N+ S+ +I + + L F K+ +
Sbjct: 322 ATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGF 381
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
+E +L+ C T+ L G Q+H L K ++ N+ V N+ + +Y KC +DEA ++F
Sbjct: 382 DEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVF 441
Query: 335 DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
D M + V+WNA+IA H Q + +K L+I + SGM+PD YTF S+
Sbjct: 442 DEMGRKDAVSWNAIIAAHEQNEERSK-----------TLNILVSMLRSGMEPDEYTFGSV 490
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA----SRVFVEMS 450
L C+ +L G +IH +K G S+ +G++LV+MY KCG I+ A +++F+ +
Sbjct: 491 LKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIG 549
Query: 451 -----------------------TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++SW ++I+G+ S A + F M+ G+ P
Sbjct: 550 DSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITP 609
Query: 488 NQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIE 542
++ T+ L C+N + LG + +++KE + D Y+C L+DM+ + G +
Sbjct: 610 DKFTYSTVLDTCANLASI--GLGKQIHAHVIKKELQY----DVYICSTLVDMYSKCGNLH 663
Query: 543 EA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKP 588
++ F+ DF V W+ I G HG E + + + L+ + P
Sbjct: 664 DSRLMFEKAPIRDF----VTWNAMICGYAHHGMGEEAIKLFESMVLMNIMP 710
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 198/417 (47%), Gaps = 52/417 (12%)
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ + LGKQ HA+++ V N L LY CG+L A K F+ + ++V+SW
Sbjct: 59 CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSW 118
Query: 245 TTVI-GACGEN------------------------------GEAVQGLRFFSKMLSEGIQ 273
+I G N GE ++ ++ F +M G++
Sbjct: 119 NAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVE 178
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
+ + + I VC + + ++G Q+H + +++GY +++ ++++ +Y KC +DE+ +
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTV 238
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F M N ++W+A+IAG Q L +GG L +F ++ G+ ++S
Sbjct: 239 FYAMPQKNWISWSAIIAGCVQNNFL--------DGG---LKMFKEMQKVGVGVSQSIYAS 287
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L C+ L L G Q+HA LK+ F+ D +V TA ++MY KC ++ A R+F
Sbjct: 288 VLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLN 347
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L S+ +MITG++ +AL LF + + + ++++ GAL AC+ + E L
Sbjct: 348 LQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHG 407
Query: 514 MMQKEYKIKPVMDHYMCL----IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
+ K + + C+ IDM+ + ++EA +M + V W+ IA
Sbjct: 408 LATKSNFSRNI-----CVANAFIDMYGKCEALDEACRVFDEMG-RKDAVSWNAIIAA 458
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 101/234 (43%), Gaps = 45/234 (19%)
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE--------- 440
FS + C++ A E G+Q HA + +GF V V L+ +Y CG +
Sbjct: 51 NFSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGM 110
Query: 441 ----------------------RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
RAS F M TR ++SW SM++GF + +++++F
Sbjct: 111 PLRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFI 170
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM------CLI 532
+M +GV + +F L CS L +++ + + I M + L+
Sbjct: 171 EMGRSGVEFDNKSFSVILKVCS-------ILENYKLGTQIHGIALRMGYDTDVVSGSALL 223
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL 586
DM+ + ++E+F M + N + WS IAGC ++ ++ G +++ K+
Sbjct: 224 DMYAKCKRLDESFTVFYAMP-QKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKV 276
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/590 (31%), Positives = 329/590 (55%), Gaps = 28/590 (4%)
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
+ K++HA ++K +L Y CG L A+K F+ + +++ ++W TV+ AC
Sbjct: 26 IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACN 85
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV--GAQVHSLGIKLGYASN 310
+ + +L EG+QP+ F +S+ C + S+ V G Q+H+ + + +
Sbjct: 86 LSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFED 145
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA------QMMDLAKDD-- 362
V++S++ +Y K L D + +FD + ++ ++W AMI+G+A + ++L ++
Sbjct: 146 DVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPF 205
Query: 363 ------------LSAHNGGTEALSIFSKLNSSGMK-PDLYTFSSILTICSRLVALEQGEQ 409
L +AL +F ++ G+ D SS++ C+ E G+Q
Sbjct: 206 KNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQ 265
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H + + G+ S + + ALV+MY KC + A +F EM + ++SWTS+I G A H L
Sbjct: 266 VHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHGL 325
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
+ +AL L++DM+LAGV+PN+VTFVG + ACS+ G+V + F+ M +++ I+P + HY
Sbjct: 326 AEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYT 385
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK 589
CL+D+F R G ++EA + I+ M +P+E W+ ++ C+ HGN ++ A+ LL LKP+
Sbjct: 386 CLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPE 445
Query: 590 DCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQ 649
D SY +L +I+ AG WE+V++V+ L +++ + +S + + + F + P
Sbjct: 446 DPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPM 505
Query: 650 SAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVS 704
EI ++ +L + + GY S L D +E +HSE+LA+A+GLL +
Sbjct: 506 KDEILGLMTKLDSEMRRRGYVPDTSSVLLDMDQQEKERQLFWHSERLALAYGLLKAVPGT 565
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I +VK+ +C DCH +K+I+++T+REI VRD KR H F +G C+C DF
Sbjct: 566 TIRIVKNLRVCGDCHTVLKLISAITSREIYVRDVKRYHHFKDGKCSCNDF 615
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 210/434 (48%), Gaps = 49/434 (11%)
Query: 85 VNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
+ RK+ A+ +HA I+K+G +H F T L++ YGKCG +++A K+FD LP+ + V+W
Sbjct: 19 LGRKNPFIAKKLHAQIIKSGLNHHHPFPKT-LIDAYGKCGLLKDALKLFDALPQQDHVAW 77
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGKQIHAYV 201
+++S ++ P A + L +L G P + + + AC++L S ++LGKQ+HA
Sbjct: 78 ATVLSACNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARF 137
Query: 202 VKYQTEDDTSVGNSLCSLYST-------------------------------CGSLNSAI 230
+ +D V +SL +Y+ G A+
Sbjct: 138 LLSPFFEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEAL 197
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ-PNEFTLTSISSVCGTM 289
+ F KN+ +WT +I ++G A L F +M EG+ + L+S+ C
Sbjct: 198 ELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANS 257
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+G QVH + I LGY S L + N+++ +Y KC V A+ +F M ++V+W ++I
Sbjct: 258 AVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSII 317
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G AQ H EAL+++ + +G+KP+ TF ++ CS + + +G
Sbjct: 318 VGTAQ-----------HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRA 366
Query: 410 I-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ ++ G + T L++++ + G ++ A + M + +W ++++ +H
Sbjct: 367 LFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHH 426
Query: 468 SLSHQALQLFEDML 481
+ A+++ + +L
Sbjct: 427 GNTKMAVRIADHLL 440
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 9/209 (4%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S++ C N + +H ++ G F+ LV++Y KC ++ A+ +F + R
Sbjct: 249 SVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRK 308
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVSWTS+I G Q+ E A+ ++ DM+ AG P VT + ACS + + G+ +
Sbjct: 309 DVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALF 368
Query: 199 AYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM----SWTTVIGACGE 253
+V+ + L L+S G L+ +A N IR V +W ++ AC
Sbjct: 369 KSMVEDFGIRPSLQHYTCLLDLFSRSGHLD---EAENLIRTMPVKPDEPTWAALLSACKH 425
Query: 254 NGEAVQGLRFFSKMLS-EGIQPNEFTLTS 281
+G +R +L + P+ + L S
Sbjct: 426 HGNTKMAVRIADHLLDLKPEDPSSYILLS 454
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/608 (33%), Positives = 318/608 (52%), Gaps = 52/608 (8%)
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC +L +R Q+HA+ D N L Y+ G L +A + F RI +NVMS
Sbjct: 53 ACRALRPLR---QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVMS 109
Query: 244 WTTVIGACGENGE---------------------AVQGLR----------FFSKMLSEGI 272
W + G +NG+ V GL FF M EG+
Sbjct: 110 WNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGM 169
Query: 273 QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQK 332
P+EF L S+ C + + G QVH+ ++ G ++ V +S+ ++Y++CG + E +
Sbjct: 170 HPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEA 229
Query: 333 LFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTF 391
+ + +++V+ N +IAG Q NG +E AL F + S G+ D+ TF
Sbjct: 230 VLRMLPSLSIVSCNTIIAGRTQ------------NGDSEGALEYFCMMRSVGVAADVVTF 277
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S ++ CS L AL QG+QIH +K G V V T LV+MY +CG + + RVF
Sbjct: 278 VSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCG 337
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
++MI+ + H +A++LF+ M+ G P+ VTF+ L ACS++G+ E +
Sbjct: 338 SDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDC 397
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FE+M K Y ++P + HY C++D+ R GC++EA I M P+ VIW ++ C+
Sbjct: 398 FELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQK 457
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
N ++ A+++++L P D SY +L +I ++ RW DV+ V+ R+ + + SW+
Sbjct: 458 NFDMAERIAKRVIELDPHDSASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWV 517
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVY 686
+K ++ F D HP+ EI + L+E++ K + GY S L D +E + +
Sbjct: 518 ELKGHIHQFCTGDESHPRQKEIDECLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSH 577
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLAIAF L+ P PI V+K+ +C DCH IK+++ +T REI+VRD R H F +
Sbjct: 578 HSEKLAIAFAFLSLPEGVPIRVMKNLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKD 637
Query: 747 GHCTCRDF 754
G C+CRD+
Sbjct: 638 GRCSCRDY 645
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 47/419 (11%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ L + C ++L +HA +G+ D F L+ Y G++ A+++F+ +P
Sbjct: 47 FSHLFRAC---RALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103
Query: 137 RINVVSWTSLISGYVQNSQ-------------------------------PELAIHVFLD 165
R NV+SW L GY++N E ++ FLD
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
M G +P LG+ C+ L + G+Q+HAYVV+ + D VG+SL +Y CG
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L + +++S T+I +NG++ L +F M S G+ + T S S
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
C + +L G Q+H +K G + V ++++Y +CG + +++++F G +
Sbjct: 284 CSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLL 343
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+AMI+ + H G +A+ +F ++ + G +P TF ++L CS E
Sbjct: 344 SAMISAYG-----------FHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKE 392
Query: 406 QGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMIT 462
+G L KT G V T +V++ + G ++ A + + M T + W ++++
Sbjct: 393 EGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 451
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 7/302 (2%)
Query: 56 SLGFQEA-----LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+LGF E L + EG S+ + C + + +HA++V++G +D
Sbjct: 150 NLGFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMC 209
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V + L ++Y +CG ++E + V LP +++VS ++I+G QN E A+ F M G
Sbjct: 210 VGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVG 269
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
VT +A+++CS L ++ G+QIH V+K + V L +YS CG L +
Sbjct: 270 VAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSE 329
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F + + +I A G +G + + F +M++ G +P++ T ++ C
Sbjct: 330 RVFFGYCGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSG 389
Query: 291 SLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-NLVTWNAM 348
G L K G +++ ++ L + G +DEA+ L M + V W +
Sbjct: 390 LKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTL 449
Query: 349 IA 350
++
Sbjct: 450 LS 451
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/601 (32%), Positives = 326/601 (54%), Gaps = 61/601 (10%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L S Y+ GS+ + F+R+ ++ +S+ T I N + L F +M EG +
Sbjct: 93 NALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P E+T+ SI + +L LR G Q+H I + N+ + N++ +Y KCG +++A+ L
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWL 212
Query: 334 FDGMSHVNLVTWNAM-----------------------------------IAGHAQ--MM 356
FD ++ NLV+WN M IA + Q +
Sbjct: 213 FDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRV 272
Query: 357 DLAKDDLS-----------------AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTIC 398
D A+ S A NG E AL +F+++ ++PD YT SS+++ C
Sbjct: 273 DEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Query: 399 SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWT 458
++L +L G+ +H ++ G ++++V +AL++MY KCG I+ A VF M TR ++SW
Sbjct: 333 AKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWN 392
Query: 459 SMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
+MI G A + AL+LFE+ML +P+ VTF+G L+AC + + + YF+ + +
Sbjct: 393 AMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQ 452
Query: 519 YKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFY 578
+ + P +DHY C++++ R G IE+A IK M +P+ +IWS ++ C G++
Sbjct: 453 HGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEV 512
Query: 579 AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVY 638
AA L +L P Y ML +++ S GRW+DVA V+NL + + + + +SWI I ++V+
Sbjct: 513 AARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVH 572
Query: 639 SFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL----TDEESASV-YHSEKLAI 693
F D HP+S +I++ L+ L+ K + G+ + L DE+ S+ +HSEKLA+
Sbjct: 573 RFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLAL 632
Query: 694 AFGLLNTPI-VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCR 752
AFGL+ P +SPI ++K+ +C DCH F+K + + R+II+RDS R H F G C+C
Sbjct: 633 AFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCN 692
Query: 753 D 753
D
Sbjct: 693 D 693
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 334/620 (53%), Gaps = 24/620 (3%)
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYV 201
SW + S +I ++ ML +G+ P + L +C+SL G+Q+H +V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 202 VKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF--NRIREKNVMSWTTVIGACGENGEAVQ 259
++ E + V +L S+Y CG + A K F N + + + +I N +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
F +M G+ + T+ + +C L +G +H +K G S + V NS +
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSK 378
+Y+KCG V+ ++LFD M L+TWNA+I+G++Q NG + L +F +
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQ------------NGLAYDVLELFEQ 244
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ SSG+ PD +T S+L+ C+ L A + G+++ L GF +V + AL++MY +CG
Sbjct: 245 MKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGN 304
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ +A VF M ++L+SWT+MI + H + L LF+DM+ G+RP+ FV L+A
Sbjct: 305 LAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSA 364
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS++G+ + L F M++EYK++P +HY CL+D+ R G ++EA +FI M EP+
Sbjct: 365 CSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGA 424
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W + C+ H N+++ A ++++ +P + Y ++ +I+ + E + ++ + R
Sbjct: 425 VWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 484
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL----VEKAKCFGYKQQES 674
E + +S++ K KV+ F D H Q+ E+ ++LDEL +E A + E
Sbjct: 485 ERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEE 544
Query: 675 FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREII 734
T E HSE+LAIAFG+LN+ + ILV+K+ +C DCH FIK+++ + R +
Sbjct: 545 VSSTTRE-----HSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFIKLVSKIVDRRFV 599
Query: 735 VRDSKRLHKFVNGHCTCRDF 754
VRD+ R H F +G C+C+D+
Sbjct: 600 VRDASRFHYFKDGVCSCKDY 619
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 198/382 (51%), Gaps = 14/382 (3%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G S+ +L+ C + + + +H H+++ G + FV+T L+++Y KCG
Sbjct: 40 SMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCG 99
Query: 124 NMEEAQKVFDNLPRINV--VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+E+A+KVF+ P + V + +LISGY NS+ A +F M E G +VT+
Sbjct: 100 LVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGL 159
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ C+ E + LG+ +H VK T + +V NS ++Y CGS+ S + F+ + K +
Sbjct: 160 VPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGL 219
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W VI +NG A L F +M S G+ P+ FTL S+ S C + + ++G +V L
Sbjct: 220 ITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGEL 279
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
G+A N+ + N+++ +Y +CG + +A+ +FD M +LV+W AMI +
Sbjct: 280 VEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM------- 332
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFL 420
H G L++F + G++PD F +L+ CS ++G E A+ +
Sbjct: 333 ----HGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 388
Query: 421 SDVVVGTALVNMYKKCGRIERA 442
+ LV++ + GR++ A
Sbjct: 389 PGPEHYSCLVDLLGRAGRLDEA 410
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 201/636 (31%), Positives = 349/636 (54%), Gaps = 21/636 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEE 127
GP + + VS L C + IHA ++K+ +H + +V L+ +Y +CG M +
Sbjct: 242 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 301
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++ + +VV+W SLI GYVQN + A+ F DM+ AG+ V++ + + A
Sbjct: 302 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 361
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L ++ G ++HAYV+K+ + + VGN+L +YS C +AF R+ +K+++SWTTV
Sbjct: 362 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 421
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +N V+ L F + + ++ +E L SI + S+ + ++H ++ G
Sbjct: 422 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 481
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ ++N ++ +Y KC + A ++F+ + ++V+W +MI+ SA N
Sbjct: 482 LDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS------------SALN 528
Query: 368 GG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +EA+ +F ++ +G+ D IL+ + L AL +G +IH L+ GF + +
Sbjct: 529 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 588
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
A+V+MY CG ++ A VF + + L+ +TSMI + H A++LF+ M V
Sbjct: 589 VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 648
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ ++F+ L ACS+AG++ E G+ ++M+ EY+++P +HY+CL+DM R C+ EAF+
Sbjct: 649 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 708
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
F+K M EP +W +A CR H E+G AA++LL+L+PK+ + ++ ++F GR
Sbjct: 709 FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 768
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK-AK 665
W DV V+ + + + SWI + KV+ F D HP+S EI++ L E+ K +
Sbjct: 769 WNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 828
Query: 666 CFGYKQQESFELTD-EESASVY----HSEKLAIAFG 696
GY F L + +E V HSE++AIA+G
Sbjct: 829 EVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 291/600 (48%), Gaps = 67/600 (11%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
N EP +L + V EG + SS+ +LL+ C + + + +H+ +VK G H
Sbjct: 123 NGEPASALALYWNMRV--EGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTG 180
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
F++ LV++Y K ++ A+++FD + + V W S++S Y + + + +F +M
Sbjct: 181 FIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHM 240
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLN 227
G P + T+ +ALTAC +LGK+IHA V+K T + V N+L ++Y+ CG +
Sbjct: 241 TGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMP 300
Query: 228 SAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
A + ++ +V++W ++I +N + L FFS M++ G + +E ++TSI + G
Sbjct: 301 QAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASG 360
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
+ +L G ++H+ IK G+ SNL+V N+++ +Y KC L + F M +L++W
Sbjct: 361 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 420
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+IAG+AQ ++ EAL +F + M+ D SIL S L ++
Sbjct: 421 VIAGYAQ-----------NDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV 469
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
++IH L+ G L D V+ LV++Y KC + A+RVF + + ++SWTSMI+ A +
Sbjct: 470 KEIHCHILRKGLL-DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALN 528
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFV------------------------------GALA 497
+A++LF M+ G+ + V + G++A
Sbjct: 529 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 588
Query: 498 -------ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
AC G + A F+ ++++ ++ Y +I+ + GC + A + K
Sbjct: 589 VAVVDMYAC--CGDLQSAKAVFDRIERKGLLQ-----YTSMINAYGMHGCGKAAVELFDK 641
Query: 551 MDFE---PNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVSA 604
M E P+ + + + C G ++ G E +L+P E Y L+D+ A
Sbjct: 642 MRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWP-EHYVCLVDMLGRA 700
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/451 (27%), Positives = 233/451 (51%), Gaps = 26/451 (5%)
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVFD +P +W ++I YV N +P A+ ++ +M G + L AC+ L
Sbjct: 99 EKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTV 247
IR G ++H+ +VK + N+L S+Y+ L++A + F+ +EK + + W ++
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 218
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG- 306
+ + +G++++ L F +M G PN +T+ S + C ++G ++H+ +K
Sbjct: 219 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 278
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
++S L V N+++ +Y +CG + +A+++ M++ ++VTWN++I G+ Q +
Sbjct: 279 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY-------- 330
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EAL FS + ++G K D + +SI+ RL L G ++HA +K G+ S++ VG
Sbjct: 331 ---KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 387
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
L++MY KC R F+ M + LISWT++I G+A + +AL+LF D+ +
Sbjct: 388 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 447
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVR---LGCI 541
+++ L A S V +++ + + K ++D + L+D++ + +G
Sbjct: 448 IDEMILGSILRASS----VLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYA 503
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
F+ IK D V W+ I+ +GN
Sbjct: 504 TRVFESIKGKDV----VSWTSMISSSALNGN 530
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 306/518 (59%), Gaps = 21/518 (4%)
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
M + +IG G+ + L FS + G + ++ TL + + CG ++ L G Q+H+
Sbjct: 1 MMFGYIIGNDGK-----KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAH 55
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
IK G+ S+L V + I+ +Y+KCG + A +F+ +S + V W +MI+G +D +
Sbjct: 56 AIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG---CVDNGNE 112
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
D +AL I+ ++ S + PD YTF++++ S + ALEQG Q+HA +K +S
Sbjct: 113 D--------QALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS 164
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
D VGT+LV+MY KCG IE A R+F +M+ R + W +M+ G A H + +A+ LF+ M
Sbjct: 165 DPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMK 224
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ P++V+F+G L+ACS+AG+ EA Y M +Y I+P ++HY CL+D R G +
Sbjct: 225 SHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLV 284
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+EA I+ M F+ + I + CR G++E G A +L L+P D +Y +L +I+
Sbjct: 285 QEADKVIETMPFKASASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIY 344
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+A RW+DV + + + + + + +SWI +K+ ++ F +D HPQ+ I+ ++E++
Sbjct: 345 AAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMM 404
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
+ + GY F L D +E + YHSEKLAIA+GL++TP + I V+K+ +C
Sbjct: 405 KTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCG 464
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCHN IK I+ + REI++RD+ R H F +G C+C D+
Sbjct: 465 DCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDY 502
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 162/319 (50%), Gaps = 12/319 (3%)
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
++ GY+ + + A+ +F + ++G +TL TA AC L + GKQIHA+ +K
Sbjct: 1 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 60
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ D V + + +Y CG + +A FN I + ++WT++I C +NG Q LR +
Sbjct: 61 FDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYH 120
Query: 266 KMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+M + P+E+T ++ + +L G Q+H+ IKL S+ V S++ +Y KCG
Sbjct: 121 RMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG 180
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+++A +LF M+ N+ WNAM+ G AQ H EA+++F + S G++
Sbjct: 181 NIEDAYRLFKKMNVRNIALWNAMLVGLAQ-----------HGNAEEAVNLFKSMKSHGIE 229
Query: 386 PDLYTFSSILTICSRL-VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
PD +F IL+ CS + E E +H++ G ++ + LV+ + G ++ A +
Sbjct: 230 PDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADK 289
Query: 445 VFVEMSTRTLISWTSMITG 463
V M + S + G
Sbjct: 290 VIETMPFKASASINRALLG 308
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 127/249 (51%), Gaps = 1/249 (0%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + IHAH +K G D V + ++++Y KCG+M A VF+ + + V+WTS+ISG
Sbjct: 46 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISG 105
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
V N + A+ ++ M ++ P T T + A S + ++ G+Q+HA V+K D
Sbjct: 106 CVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSD 165
Query: 210 TSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS 269
VG SL +Y+ CG++ A + F ++ +N+ W ++ ++G A + + F M S
Sbjct: 166 PFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKS 225
Query: 270 EGIQPNEFTLTSISSVCGTM-LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
GI+P+ + I S C L+ +HS+ G + + ++ + GLV
Sbjct: 226 HGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQ 285
Query: 329 EAQKLFDGM 337
EA K+ + M
Sbjct: 286 EADKVIETM 294
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 191/600 (31%), Positives = 320/600 (53%), Gaps = 13/600 (2%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L +L E ++ S+++ C + + + +HA ++K S L+ +Y +
Sbjct: 157 LKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
M +A +VF +P +++SW+S+I+G+ Q A+ +ML G + P G++
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L ACSSL G QIH +K + + G SLC +Y+ CG LNSA + F++I +
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
SW +I NG A + + FS+M S G P+ +L S+ ++L G Q+HS
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMDLAK 360
IK G+ ++L V NS++ +Y C + LF D ++ + V+WN ++ Q
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQ------ 450
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
H E L +F + S +PD T ++L C + +L+ G Q+H +LKTG
Sbjct: 451 -----HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ + L++MY KCG + +A R+F M R ++SW+++I G+A +AL LF++M
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
AG+ PN VTFVG L ACS+ G+V E L + MQ E+ I P +H C++D+ R G
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+ EA FI +M EP+ V+W ++ C+ GN+ L AAE +LK+ P + ++ +L +
Sbjct: 626 LNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSM 685
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
S+G WE+ A++++ ++ + + SWI I+DK++ F D HP+ +I+ VL +
Sbjct: 686 HASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNI 745
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 171/574 (29%), Positives = 285/574 (49%), Gaps = 50/574 (8%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K++ +Y+SL+ C + +SL+ IH HI+ + D + ++++YGKCG++ +A++
Sbjct: 64 KIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDARE 123
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P N+VS+TS+I+GY QN Q AI ++L ML+ P G+ + AC+S
Sbjct: 124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSD 183
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ LGKQ+HA V+K ++ N+L ++Y ++ A + F I K+++SW+++I
Sbjct: 184 VGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAG 243
Query: 251 CGENGEAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ G + L +MLS G+ PNE+ S C ++L G+Q+H L IK A
Sbjct: 244 FSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAG 303
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
N S+ +Y +CG ++ A+++FD + + +WN +IAG A+NG
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAG------------LANNGY 351
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+S+FS++ SSG PD + S+L ++ +AL QG QIH+ +K GFL+D+ V +
Sbjct: 352 ADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNS 411
Query: 429 LVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
L+ MY C + +F + +SW +++T H + L+LF+ ML++ P
Sbjct: 412 LLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Query: 488 NQVTFVGALAACS----------------NAGMVYEAL---GYFEMMQK------EYKIK 522
+ +T L C G+ E G +M K +I
Sbjct: 472 DHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIF 531
Query: 523 PVMDH-----YMCLIDMFVRLGCIEEAFDFIKKMD---FEPNEVIWSVFIAGCRRHGNME 574
MD+ + LI + + G EEA K+M EPN V + + C G +E
Sbjct: 532 DSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVE 591
Query: 575 LG--FYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
G YA Q E + ++D+ AGR
Sbjct: 592 EGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 15/225 (6%)
Query: 354 QMMDLAKDDLSAHNGGTEALSIFS-KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
++M+ + L N EAL F +S K L T+ S++ CS +L QG +IH
Sbjct: 32 ELMNDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHD 91
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQ 472
L + D ++ +++MY KCG + A VF M R L+S+TS+ITG++ + +
Sbjct: 92 HILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE 151
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYM 529
A++L+ ML + P+Q F + AC+++ V LG + ++++ E + +
Sbjct: 152 AIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV--GLGKQLHAQVIKLESSSHLIAQN-- 207
Query: 530 CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
LI M+VR + +A F I D + WS IAG + G
Sbjct: 208 ALIAMYVRFNQMSDASRVFYGIPMKDL----ISWSSIIAGFSQLG 248
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 203/697 (29%), Positives = 364/697 (52%), Gaps = 21/697 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
++V + KVQ + + N + +IH H+ H D F++ L+
Sbjct: 4 VTVPSSTSKVQQIKTLISVASTFNHLKQVHVSLIHHHL-----HHDTFLVNLLLKRTLFF 58
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
+ +F + N+ + +LI+G+V N + +FL + + G T L
Sbjct: 59 RQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVL 118
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC+ + +LG +H+ VVK D + SL S+YS G LN A K F I E++V+
Sbjct: 119 KACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVV 178
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+WT + G+ + + F KM+ G++P+ + + + S C + L G +
Sbjct: 179 TWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHM 238
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
++ N VR +++ LY KCG +++A+ +FD M ++VTW+ MI G+A
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYA--------- 289
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
+++ E + F ++ +KPD ++ L+ C+ L AL+ GE +L + FL++
Sbjct: 290 --SNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTN 347
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
+ + AL++MY KCG + R VF EM + ++ + I+G A + + +F
Sbjct: 348 LFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEK 407
Query: 483 AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIE 542
G+ P+ TF+G L C +AG++ + L +F + Y +K ++HY C++D++ R G ++
Sbjct: 408 LGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLD 467
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFV 602
+A+ I M PN ++W ++GCR + +L ++L+ L+P + +Y L +I+
Sbjct: 468 DAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYS 527
Query: 603 SAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVE 662
+GRW++ A V+++ + + + +SWI ++ V+ F +D HP S +I+ L++L
Sbjct: 528 VSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGN 587
Query: 663 KAKCFGYKQQES---FELTDEESASV--YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRD 717
+ + G+ F++ DEE V +HSEKLA+AFGL++T I VVK+ +C D
Sbjct: 588 EMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGD 647
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH +K+I+ +T REI+VRD+ R H F NG C+C D+
Sbjct: 648 CHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDY 684
>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g52850, chloroplastic; Flags: Precursor
gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 893
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 208/671 (30%), Positives = 360/671 (53%), Gaps = 20/671 (2%)
Query: 90 LSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISG 149
L + IH++I+ G + + T LV+ Y + ME+A +V ++ +V WTS++SG
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+V+N + + A+ FL+M G P N T L+ CS++ S+ GKQIH+ +K ED
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 210 TSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
T VGN+L +Y C S A + F + NV+SWTT+I ++G +M+
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
++PN TL+ + C + +R ++H+ ++ + V NS++ Y VD
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
A + M + +T+ +++ + +L K ++ ALS+ + + G++ D
Sbjct: 480 YAWNVIRSMKRRDNITYTSLVT---RFNELGKHEM--------ALSVINYMYGDGIRMDQ 528
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
+ ++ + L ALE G+ +H ++K+GF V +LV+MY KCG +E A +VF E
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA 508
++T ++SW +++G A++ AL FE+M + P+ VTF+ L+ACSN +
Sbjct: 589 IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG 648
Query: 509 LGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
L YF++M+K Y I+P ++HY+ L+ + R G +EEA ++ M +PN +I+ + CR
Sbjct: 649 LEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACR 708
Query: 569 RHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDW 628
GN+ LG A + L L P D Y +L D++ +G+ E +NL E++LS+
Sbjct: 709 YRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGK 768
Query: 629 SWIRIKDKVYSFKPNDGLH-PQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASVYH 687
S + ++ KV+SF D ++ I+ ++ + E+ K FG + E+AS +H
Sbjct: 769 STVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYR------GNENAS-FH 821
Query: 688 SEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNG 747
S K A+ +G + +P+ VVK+ +C+DCH F+ I+T L ++I VRD ++H F NG
Sbjct: 822 SAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNG 881
Query: 748 HCTCRDFGVSF 758
C+C+ SF
Sbjct: 882 ECSCKREETSF 892
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 241/462 (52%), Gaps = 14/462 (3%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH ++K G ++ + L+++Y K + A+K+FD + V +WT +IS + ++ +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F +M+ +G +P T + + +C+ L I G ++H V+K E ++ VG+S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSS 164
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L LYS CG A + F+ ++ + +SWT +I + + + L+F+S+M+ G+ PN
Sbjct: 165 LSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPN 224
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
EFT + + L L G +HS I G N+ ++ S++ Y + +++A ++ +
Sbjct: 225 EFTFVKLLG-ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN 283
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
++ W ++++G + + EA+ F ++ S G++P+ +T+S+IL
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLR-----------AKEAVGTFLEMRSLGLQPNNFTYSAIL 332
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE-RASRVFVEMSTRTL 454
++CS + +L+ G+QIH+ T+K GF VG ALV+MY KC E ASRVF M + +
Sbjct: 333 SLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNV 392
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEM 514
+SWT++I G +H L +M+ V PN VT G L ACS V L
Sbjct: 393 VSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAY 452
Query: 515 MQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ + + + M L+D + ++ A++ I+ M N
Sbjct: 453 LLRRH-VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDN 493
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 283/594 (47%), Gaps = 37/594 (6%)
Query: 55 RSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
+S F ALS+ E G ++ S+++ C + +S +H ++KTG +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V + L ++Y KCG +EA ++F +L + +SWT +IS V + A+ + +M++AG
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P T L SS + GK IH+ ++ + + SL YS + A+
Sbjct: 221 VPPNEFTF-VKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ N E++V WT+V+ N A + + F +M S G+QPN FT ++I S+C +
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD-EAQKLFDGMSHVNLVTWNAMI 349
SL G Q+HS IK+G+ + V N+++ +Y+KC + EA ++F M N+V+W +I
Sbjct: 340 SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G L H + + ++ ++P++ T S +L CS+L + + +
Sbjct: 400 LG-----------LVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IHA L+ ++VVG +LV+ Y +++ A V M R I++TS++T F
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
AL + M G+R +Q++ G ++A +N G + E + +
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL-ETGKHLHCYSVKSGFSGAASVLN 567
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQL-LKLKP 588
L+DM+ + G +E+A +++ P+ V W+ ++G +G + A E++ +K
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKP 642
D ++ +LL S GR D+ + + ++ K+Y+ +P
Sbjct: 627 PDSVTFLILLSA-CSNGRLTDLGL----------------EYFQVMKKIYNIEP 663
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 7/206 (3%)
Query: 57 LGFQE-ALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFV 111
LG E ALSV+ +G ++ S + N +L + +H + VK+G V
Sbjct: 506 LGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASV 565
Query: 112 MTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN 171
+ LV++Y KCG++E+A+KVF+ + +VVSW L+SG N A+ F +M
Sbjct: 566 LNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKET 625
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAI 230
P +VT L+ACS+ LG + + K Y E L + G L A
Sbjct: 626 EPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEAT 685
Query: 231 KAFNRIREK-NVMSWTTVIGACGENG 255
+ K N M + T++ AC G
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRG 711
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 195/617 (31%), Positives = 338/617 (54%), Gaps = 33/617 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V S Y S+L+ C L +HAH +K+ D V T +++Y KC NM++AQ +
Sbjct: 237 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 296
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD +N S+ ++I+GY Q A+ +F ++ +G ++L AC+ ++ +
Sbjct: 297 FDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 356
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QI+ +K D V N+ +Y C +L A + F+ +R ++ +SW +I A
Sbjct: 357 SEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 416
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG+ + L F ML I+P+EFT S+ C T SL G ++HS +K G ASN
Sbjct: 417 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKAC-TGGSLGYGMEIHSSIVKSGMASNS 475
Query: 312 RVRNSIMYLYLKCGLVDEAQKL----------------FDGMSHVNL----VTWNAMIAG 351
V S++ +Y KCG+++EA+K+ + M + L V+WN++I+G
Sbjct: 476 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISG 535
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ M + ++D A +F+++ G+ PD +T++++L C+ L + G+QIH
Sbjct: 536 YV-MKEQSED----------AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 584
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A +K SDV + + LV+MY KCG + + +F + R ++W +MI G+A+H
Sbjct: 585 AQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 644
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A+QLFE M+L ++PN VTF+ L AC++ G++ + L YF MM+++Y + P + HY +
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH-GNMELGFYAAEQLLKLKPKD 590
+D+ + G ++ A + I++M FE ++VIW + C H N+E+ A LL+L P+D
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 764
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L +++ AG WE V+ ++ R KL + SW+ +KD+++ F D HP+
Sbjct: 765 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRW 824
Query: 651 AEIFKVLDELVEKAKCF 667
EI++ L + + K F
Sbjct: 825 EEIYEELGLIYSEMKPF 841
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 242/491 (49%), Gaps = 23/491 (4%)
Query: 57 LGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLV 116
LG Q ++ G + T LLQ N + +A ++ + +D ++
Sbjct: 24 LGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRM----PLRDVVSWNKMI 79
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
N Y K NM +A F+ +P +VVSW S++SGY+QN + +I VF+DM AG
Sbjct: 80 NGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGR 139
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T L CS LE LG QIH VV+ + D ++L +Y+ +++ F I
Sbjct: 140 TFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 199
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
EKN +SW+ +I C +N L+FF +M ++ S+ C + LR+G
Sbjct: 200 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 259
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
Q+H+ +K +A++ VR + + +Y KC + +AQ LFD ++N ++NAMI G++Q
Sbjct: 260 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGYSQ-- 317
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
G +AL +F +L SSG+ D + S + C+ + L +G QI+ L +K
Sbjct: 318 ---------EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIK 368
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+ DV V A ++MY KC + A RVF EM R +SW ++I + ++ L L
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKPVMDHYM--CLID 533
F ML + + P++ TF L AC+ +LGY E+ K + + LID
Sbjct: 429 FVSMLRSRIEPDEFTFGSVLKACTGG-----SLGYGMEIHSSIVKSGMASNSSVGCSLID 483
Query: 534 MFVRLGCIEEA 544
M+ + G IEEA
Sbjct: 484 MYSKCGMIEEA 494
>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 643
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 335/641 (52%), Gaps = 40/641 (6%)
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLE--AGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
SW I Q AI +FL M A +L AL +C+ L L +HA
Sbjct: 14 SWAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLHA 73
Query: 200 YVVKYQTEDDTSVGNSLCSL---------------YSTCGSLNSAI-----KAFNRIREK 239
++ + D N+L +L S G L SA K F+ + E+
Sbjct: 74 LAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLER 133
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+ +SW T+I C E+ + L +M +G P+ FTL+++ + ++ G VH
Sbjct: 134 DAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVH 193
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA 359
IK G+ +++ V +S++ +Y C +D + K+FD S + V WN+M+AG+AQ
Sbjct: 194 GYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQ----- 248
Query: 360 KDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
NG E AL IF ++ +G++P TFSS++ L L G+Q+HA ++
Sbjct: 249 -------NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRAR 301
Query: 419 FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFE 478
F ++ + ++L++MY KCG ++ A RVF + + ++SWT+MI G+A H + +A LFE
Sbjct: 302 FNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFE 361
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
M L V+PN +TF+ L ACS+AG+V YF M +Y P ++H L D R
Sbjct: 362 RMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRA 421
Query: 539 GCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLL 598
G ++EA++FI +M +P +WS + CR H N L A+++ +L+PK S+ +L
Sbjct: 422 GDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILS 481
Query: 599 DIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLD 658
+++ ++GRW + A ++ R + + + SWI +K+K++ F +D HP I L+
Sbjct: 482 NMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALN 541
Query: 659 ELVEKAKCFGYKQQESFELTD---EESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTT 713
E+ GY L D E+ V HSEKLAI FG+++TP + I V+K+
Sbjct: 542 VYSEQMIRQGYVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLR 601
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH K I+ + AREI+VRD R H+F +G+C+C DF
Sbjct: 602 VCVDCHIATKFISKIVAREIVVRDVNRFHRFKDGNCSCGDF 642
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 204/409 (49%), Gaps = 33/409 (8%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC------------ 122
+S + L+ C + A +HA +++GS D F L+N+ K
Sbjct: 50 ASLPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGP 109
Query: 123 ---GNMEEA-----QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
G +E A +KVFD + + VSW +LI G ++ + + A+ + +M G P
Sbjct: 110 SGEGGLESAAYESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPD 169
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
TL T L + I+ G +H Y +K ++D VG+SL +Y+ C ++ ++K F+
Sbjct: 170 TFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFD 229
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ + + W +++ +NG + L F +ML G++P T +S+ G + LR+
Sbjct: 230 SFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRL 289
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ I+ + N+ + +S++ +Y KCG VD A+++F+G+ ++V+W AMI G+A
Sbjct: 290 GKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYA- 348
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHAL 413
H TEA +F ++ +KP+ TF ++LT CS ++ G + +++
Sbjct: 349 ----------LHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSM 398
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMI 461
+ + GF+ + AL + + G ++ A EM + S W++++
Sbjct: 399 SNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMKIKPTSSVWSTLL 447
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 8/199 (4%)
Query: 60 QEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EAL + L G + ++ SL+ N L + +HA++++ + + F+ + L
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 312
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PT 174
+++Y KCGN++ A++VF+ + ++VSWT++I GY + P V + +E GN P
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHG-PTTEAFVLFERMELGNVKPN 371
Query: 175 NVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
++T LTACS + G K ++ +Y +L G L+ A
Sbjct: 372 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 431
Query: 234 NRIREKNVMS-WTTVIGAC 251
+ ++ K S W+T++ AC
Sbjct: 432 SEMKIKPTSSVWSTLLRAC 450
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/758 (28%), Positives = 381/758 (50%), Gaps = 100/758 (13%)
Query: 96 IHAHIVKTG-SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IH ++K G + D V++ + YG+C ++ A K+FD +P+ + ++W ++ +++
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 155 QPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGN 214
E A+ +F +M +G + T+ L CS+ E G+QIH YV++ E + S+ N
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 215 SLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA-------------------CGE-- 253
SL +YS G L + K FN ++++N+ SW +++ + CG
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 254 ---------NGEAVQGLR-----FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+G A +GL +M G++P+ +++S+ L++G +H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV---------------- 343
++ ++ V +++ +Y+K G + A+ +FD M N+V
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 344 -------------------TWNAMIAGHAQM------MDL---------AKDDLS----- 364
TWN++ +G+A + +D+ A + +S
Sbjct: 309 DAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF 368
Query: 365 ---AHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
+ NG AL +F K+ G+ P+ T S++L I L L G+++H L+ +
Sbjct: 369 SGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
D V TALV+MY K G ++ A +F + ++L SW M+ G+A + + F M
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
L AG+ P+ +TF L+ C N+G+V E YF++M+ Y I P ++H C++D+ R G
Sbjct: 489 LEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGY 548
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
++EA+DFI+ M +P+ IW F++ C+ H ++EL A ++L L+P + +Y M++++
Sbjct: 549 LDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINL 608
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ + RWEDV ++NL R ++ D WSWI+I V+ F HP +I+ L +L
Sbjct: 609 YSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKL 668
Query: 661 VEKAKCFGYKQQESF---ELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMC 715
V + K GY S +++D E + H+EKLA+ +GL+ ++PI VVK+T +C
Sbjct: 669 VSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNIC 728
Query: 716 RDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
D H K ++ L REI++++ R+H F +G C+C D
Sbjct: 729 SDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCND 766
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 187/408 (45%), Gaps = 64/408 (15%)
Query: 193 LGKQIHAYVVKYQTED-DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LG IH ++K ++ DT V ++ Y C SL A K F+ + +++ ++W ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+G + + F +M G + + T+ + VC G Q+H ++LG SN+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM------------MDLA 359
+ NS++ +Y + G ++ ++K+F+ M NL +WN++++ + ++ M++
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 360 --KDDLSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
K D+ N +A+++ ++ +G+KP + SS+L + L+ G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
+ IH L+ DV V T L++MY K G + A VF M + +++W S+++G +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDH 527
L A L M G++P+ +T+ +LA+ Y LG KP
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITW-NSLASG------YATLG-----------KP---- 342
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMD---FEPNEVIWSVFIAGCRRHGN 572
E+A D I KM PN V W+ +GC ++GN
Sbjct: 343 --------------EKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 375/732 (51%), Gaps = 65/732 (8%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG------NMEEAQKVFDNLPRINVV 141
+S+ A +HA +V +G + L+N C ++ A +FD +P +
Sbjct: 10 RSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFL 69
Query: 142 SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES-IRLGKQIHAY 200
T+L + + +S PE + ++ M G T C+ + + L + +HA
Sbjct: 70 FDTALRACFRASSGPESPLILYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAA 129
Query: 201 VVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE------ 253
+ V N + +Y G A +AF+ I K+ ++WTTVI +
Sbjct: 130 CFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDD 189
Query: 254 -------------------------NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
G A + + F+ MLS+GI+P+E T+ + S C
Sbjct: 190 AWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQ 249
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLV-TWNA 347
+ L G +H L + G + ++ +++ +Y KCG + A ++FD + +WNA
Sbjct: 250 LKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNA 309
Query: 348 MIAGHAQM--MDLAK--------DDLSAHN--------GGT--EALSIFSKLNSSGMKPD 387
MI G+ ++ +D+A+ DL N GG EAL +F ++ ++ D
Sbjct: 310 MIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLITGYIHGGRLREALLLFMQMRRHDLRAD 369
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
+T S+LT C+ L AL QG +HA + D+ +GTAL++MY KCGR+E AS VF
Sbjct: 370 NFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQ 429
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
MS R + +W++MI G A + + AL+ F M + G +PN VT++ L ACS++ ++ E
Sbjct: 430 AMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDE 489
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
YFE M+ + I+P+++HY C+ID+ R G ++EA D ++ M +PN VIW+ ++ C
Sbjct: 490 GRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSAC 549
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H + L AAE LLKL+P + Y L +I++ + +WED + ++ L E + +
Sbjct: 550 RVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAG 609
Query: 628 WSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYK---QQESFELTDEES-- 682
+S I + +V+ F D HPQ EI +++E+ + K GY Q + ++ +EE
Sbjct: 610 YSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEH 669
Query: 683 ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
A + HSEK+AIAFGL++ P+ ++K+ +C DCH+ IK+I+ + REIIVRD R H
Sbjct: 670 ALLAHSEKIAIAFGLISLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFH 729
Query: 743 KFVNGHCTCRDF 754
F +G C+C DF
Sbjct: 730 HFRDGTCSCNDF 741
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
+ + VSLL C + +L +HA I + D ++ T L+++Y KCG +EEA
Sbjct: 367 RADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASL 426
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS--- 187
VF + +V +W+++I+G N + A+ F M G P +VT LTACS
Sbjct: 427 VFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCL 486
Query: 188 -------LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EK 239
E +RL I + Y + L G L+ A+ + +
Sbjct: 487 LDEGRLYFEEMRLLHNIRPLIEHY---------GCMIDLLGRSGLLDEAMDLVRTMPMQP 537
Query: 240 NVMSWTTVIGACGENGEA 257
N + W +++ AC + +A
Sbjct: 538 NAVIWASILSACRVHKDA 555
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 187/591 (31%), Positives = 331/591 (56%), Gaps = 13/591 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L C L + +H+ VK G + V L+ +Y KC +++A ++F+ +P+ +
Sbjct: 248 FLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDD 307
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+V+W +ISG VQN A +F DM +G P ++TL + L A + L ++ GK++H
Sbjct: 308 LVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHG 367
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+V+ D + ++L +Y C + A ++ R +V+ +T+I NG + +
Sbjct: 368 YIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEE 427
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L+ F +L + I+PN T+ S+ C +M +L +G Q+H ++ Y V +++M
Sbjct: 428 ALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMD 487
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSIFSK 378
+Y KCG +D + +F MS + VTWN+MI+ +Q NG EAL +F +
Sbjct: 488 MYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQ------------NGKPQEALDLFRQ 535
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+K + T S+ L+ C+ L A+ G++IH +T+K +D+ +AL++MY KCG
Sbjct: 536 MCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGN 595
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+E A RVF M + +SW S+I+ + H L +++ L M G +P+ VTF+ ++A
Sbjct: 596 LELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISA 655
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
C++AG+V E + F+ M K+Y I P M+H+ C++D++ R G +++A FI M F+P+
Sbjct: 656 CAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAG 715
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW + CR H N+EL A+++L KL P + Y ++ +I AGRW+ V+ V+ L +
Sbjct: 716 IWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMK 775
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ K+ + +SW+ + + + F +D HP+S +I+ L L+++ + GY
Sbjct: 776 DNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGY 826
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/505 (28%), Positives = 254/505 (50%), Gaps = 21/505 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T YV ++ C ++S ++H G D +V + LV +Y G + A+
Sbjct: 139 PDAHTLPYV--VKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNAR 196
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
FD +P + V W ++ G ++ + A+ +F +M +G P TL L+ C++
Sbjct: 197 DAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDA 256
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G Q+H+ VK E + +V N+L ++Y+ C L+ A + F + + ++++W +I
Sbjct: 257 DLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMIS 316
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
C +NG V+ F M G +P+ TL S+ + L+ G +VH ++
Sbjct: 317 GCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNM 376
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
++ + ++++ +Y KC V AQ L+D +++V + MI+G+ NG
Sbjct: 377 DVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVL------------NGM 424
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL +F L +KP+ T +S+L C+ + AL G+QIH L+ + V +A
Sbjct: 425 SEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESA 484
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY KCGR++ + +F++MS + ++W SMI+ F+ + +AL LF M + G++ N
Sbjct: 485 LMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYN 544
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+T AL+AC++ +Y + K IK + LIDM+ + G +E A +
Sbjct: 545 NITISAALSACASLPAIYYGKEIHGVTIKG-PIKADIFAESALIDMYAKCGNLELA---L 600
Query: 549 KKMDFEP--NEVIWSVFIAGCRRHG 571
+ +F P NEV W+ I+ HG
Sbjct: 601 RVFEFMPDKNEVSWNSIISAYGAHG 625
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 219/399 (54%), Gaps = 16/399 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F EA + + G + + + VSLL + L + +H +IV+ + D F+++
Sbjct: 324 FVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSA 383
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++Y KC ++ AQ ++D I+VV +++ISGYV N E A+ +F +LE P
Sbjct: 384 LVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPN 443
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT+ + L C+S+ ++ LG+QIH YV++ E V ++L +Y+ CG L+ + F
Sbjct: 444 AVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFL 503
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ +K+ ++W ++I + +NG+ + L F +M EGI+ N T+++ S C ++ ++
Sbjct: 504 KMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYY 563
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G ++H + IK +++ ++++ +Y KCG ++ A ++F+ M N V+WN++I+ +
Sbjct: 564 GKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYG- 622
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
AH E++S+ + G KPD TF ++++ C+ +E+G Q+
Sbjct: 623 ----------AHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCM 672
Query: 415 LKTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTR 452
K ++ + A +V++Y + G++++A + +M +
Sbjct: 673 TKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFK 711
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 221/517 (42%), Gaps = 64/517 (12%)
Query: 182 LTACSSLESIRLGKQIHAYVV---KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN---R 235
L C S + LG QIHA V + ++ L +Y A+ F+ R
Sbjct: 39 LRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSALPR 98
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLR 293
+ + W +I G+ + F+ KM S P+ TL + C + ++
Sbjct: 99 AAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMS 158
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G VH +G A+++ V ++++ +Y GL+ A+ FDG+ + V WN M+ G
Sbjct: 159 LGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMDGCI 218
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ D+ A+ +F + +SG +P+ T + L++C+ L G Q+H+L
Sbjct: 219 KAGDV-----------DGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSL 267
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K G +V V L+ MY KC ++ A R+F M L++W MI+G + L +A
Sbjct: 268 AVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEA 327
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMV---YEALGYF------------------ 512
LF DM +G RP+ +T V L A ++ + E GY
Sbjct: 328 FGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDI 387
Query: 513 -------EMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIW 560
M Q Y +D + +I +V G EEA F ++ + +PN V
Sbjct: 388 YFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTI 447
Query: 561 SVFIAGCRRHGNMELGFYAAEQLLK-LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTRE 619
+ + GC + LG +L+ + C + L+D++ GR D++ L
Sbjct: 448 ASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRL-DLSHYIFL--- 503
Query: 620 EKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA-EIFK 655
K+S+ D+ +W + SF N PQ A ++F+
Sbjct: 504 -KMSQKDEVTW---NSMISSFSQNG--KPQEALDLFR 534
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 60 QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
QEAL + EG K + + L C + ++ + IH +K D F + L
Sbjct: 527 QEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESAL 586
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+++Y KCGN+E A +VF+ +P N VSW S+IS Y + + ++ + M E G P +
Sbjct: 587 IDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDH 646
Query: 176 VTLGTALTACSSLESIRLGKQI-HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
VT ++AC+ + G Q+ KY + LYS G L+ AI+
Sbjct: 647 VTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIA 706
Query: 235 RIREK-NVMSWTTVIGAC 251
+ K + W ++ AC
Sbjct: 707 DMPFKPDAGIWGALLHAC 724
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 25/225 (11%)
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSD---VVVGTALVNMYKKCGRIERASRVFVEM 449
++L C L G QIHA + +G LSD + + T L+ MY R A VF +
Sbjct: 37 AVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96
Query: 450 ---STRTLISWTSMITGFANHSLSHQALQLFEDML--LAGVRPNQVTFVGALAACSNAGM 504
+ + + W +I GF H A+ + M A P+ T + +C+ G
Sbjct: 97 PRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGA 156
Query: 505 VYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVR---LGCIEEAFDFIKKMDFEPNEVI 559
+ +LG + + I D Y+ L+ M+ LG +AFD I + D V+
Sbjct: 157 M--SLGRL-VHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDC----VL 209
Query: 560 WSVFIAGCRRHGNMELGFYAAEQLLK-LKPKDCESYAMLLDIFVS 603
W+V + GC + G+++ A +L + ++ CE L F+S
Sbjct: 210 WNVMMDGCIKAGDVD----GAVRLFRNMRASGCEPNFATLACFLS 250
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 202/591 (34%), Positives = 329/591 (55%), Gaps = 12/591 (2%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + +Y S+L+ C + + ++IH +VK G D V + LV +Y KC E A K
Sbjct: 103 KPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVK 162
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
+FD +P +V W ++IS Y Q+ + E A+ F M G P +VT+ TA+++C+ L
Sbjct: 163 LFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLD 222
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ G++IH +V D+ V +L +Y CG L AI+ F ++ K V++W ++I
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMING 282
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
G G+ + ++ F +M SEG++P TLTS C L G VH I+ +
Sbjct: 283 YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPD 342
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ + +S+M LY KCG V+ A+ +F M V+WN MI+G+ L
Sbjct: 343 IFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKL-----------F 391
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
+AL +F +++ S ++PD TF+S+L CS+L ALE+G +IH L ++ ++ VV AL+
Sbjct: 392 DALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALL 451
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG +E A VF + R L+SWTSMIT + +H ++AL+LF +ML + V+P++V
Sbjct: 452 DMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRV 511
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK- 549
TF+ L+ACS+AG+V + L +F M Y I P ++HY CLI + R G + EA++ ++
Sbjct: 512 TFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQS 571
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
+ + + S + CR H N++LG AE L+ P D +Y +L +++ S G+W++
Sbjct: 572 NPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDE 631
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
V +V++ ++ L + SWI I +K+ F D H I +L L
Sbjct: 632 VRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYL 682
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 254/500 (50%), Gaps = 19/500 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+ LL+ VN KSL +++H +V G D +V L+++Y C + A+ VFD +
Sbjct: 7 IPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIEN 66
Query: 138 INVVSWTS-LISGYVQNSQPELAIHVFLD-MLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+S + L++GY +N + A+ +F M P + T + L AC L + LG+
Sbjct: 67 PFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQ 126
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
IH +VK D VG+SL +Y+ C A+K F+ + +K+V W TVI ++G
Sbjct: 127 MIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSG 186
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ + LR+F M G +P+ T+T+ S C +L L G ++H + G+ + V
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSA 246
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KCG ++ A ++F+ M + +V WN+MI G+ D G + +
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGD-----------GISCIQL 295
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ S G+KP L T +S L CS+ L +G+ +H ++ D+ + ++L+++Y K
Sbjct: 296 FKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFK 355
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG++E A +F M T +SW MI+G+ AL+LF +M + V P+ +TF
Sbjct: 356 CGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSV 415
Query: 496 LAACSNAGMVYEALGYFEMMQKEY--KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
LAACS + + ++ + + VM L+DM+ + G +EEAF K +
Sbjct: 416 LAACSQLAALEKGREIHNLIVERNLGNNEVVMG---ALLDMYAKCGAVEEAFGVFKCLP- 471
Query: 554 EPNEVIWSVFIAGCRRHGNM 573
E + V W+ I HG +
Sbjct: 472 ERDLVSWTSMITAYGSHGRV 491
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 121/220 (55%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
+EG K ++ S L C L + +H +I++ D F+ + L+++Y KCG +E
Sbjct: 301 SEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVE 360
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
A+ +F +P+ VSW +ISGYV + A+ +F +M ++ P +T + L ACS
Sbjct: 361 SAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACS 420
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L ++ G++IH +V+ ++ V +L +Y+ CG++ A F + E++++SWT+
Sbjct: 421 QLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTS 480
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+I A G +G + L F++ML ++P+ T +I S C
Sbjct: 481 MITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSAC 520
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 335/625 (53%), Gaps = 49/625 (7%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ L T+C + + KQ+HA +K Q +D + + + ++ A F
Sbjct: 20 LILSKPFTSCKTPRDL---KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFR 76
Query: 235 RIREKNVMSWTTVIGACGE-NGEAVQ--GLRFFSKMLSEG-IQPNEFTLTSISSVCGTML 290
++ E N W T++ E N E +Q L FS ML +G ++PN FT S+ C
Sbjct: 77 QMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARAS 136
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-------DGMSHV--- 340
LR G Q+H L +K G+ + V ++++ +Y+ C ++++A LF DG +
Sbjct: 137 RLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELD 196
Query: 341 ------NLVTWNAMIAGHAQMMDLAK-----DDLS--------------AHNGG-TEALS 374
N+V WN MI G ++ D+ D++ A NG EA++
Sbjct: 197 KRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAIN 256
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ SS + P+ T S+L +R+ ALE G+ IH K D V+G+ALV+MY
Sbjct: 257 LFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYS 316
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I++A +VF + R I+W+++I FA H + A+ F M AGV PN V ++G
Sbjct: 317 KCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIG 376
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS+AG+V E +F M K ++P ++HY C++D+ R G +EEA + I+ M E
Sbjct: 377 ILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIE 436
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P++VIW + C+ H N+++G AE L++L P D SY L +++ S G WE VA V+
Sbjct: 437 PDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVR 496
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-- 672
+ + + SWI I ++ F D H ++ EI +L E+ K + GY+
Sbjct: 497 LKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTL 556
Query: 673 ESFELTDEES---ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
E F TDE+ A YHSEK+A+AFGL++T P+ +VK+ +C DCH +K+I+ +
Sbjct: 557 EVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIY 616
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R+IIVRD KR H+F +G C+C D+
Sbjct: 617 KRQIIVRDRKRFHQFEHGSCSCMDY 641
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 187/448 (41%), Gaps = 93/448 (20%)
Query: 50 NSEPVRSLGFQEALSVLTEGP-KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
N E ++S ++L +G K ++ S+L+ C L + IH IVK G H+D
Sbjct: 97 NDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHED 156
Query: 109 FFVMTFLVNVYGKCGNMEEA---------------------------------------- 128
FV++ LV +Y C ME+A
Sbjct: 157 EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVR 216
Query: 129 -------QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+ +FD +P +VVSW +ISGY QN AI++F +M + P VTL +
Sbjct: 217 LGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSV 276
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L A + + ++ LGK IH Y K + E D +G++L +YS CGS++ A++ F + ++N
Sbjct: 277 LPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNA 336
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W+ +IGA +G A + F M G+ PN+ I S C
Sbjct: 337 ITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS-------------- 382
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
GLV+E + F M V +V I + M+DL
Sbjct: 383 ---------------------HAGLVEEGRSFFSHM--VKVVGLQPRIEHYGCMVDLLGR 419
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ H E L + + ++PD + ++L C L+ GE++ A TL
Sbjct: 420 --AGHLEEAEEL-----IRNMPIEPDDVIWKALLGACKMHKNLKMGERV-AETLMELAPH 471
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEM 449
D AL N+Y G E +RV ++M
Sbjct: 472 DSGSYVALSNLYASLGNWEAVARVRLKM 499
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 210/519 (40%), Gaps = 86/519 (16%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P R+L F + P + + + S C + L +HA +KTG QD
Sbjct: 8 PNRTLNFS------PQPPLILSKPFTS----CKTPRDLKQ---LHAIFIKTGQIQDPLTA 54
Query: 113 TFLVNVYG-KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPEL---AIHVFLDMLE 168
++ +++ A+ VF +P N W +++ + + L A+ +F ML
Sbjct: 55 AEVIKFCAFSSRDIDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLC 114
Query: 169 AGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTC---- 223
G P T + L AC+ +R GKQIH +VK+ +D V ++L +Y C
Sbjct: 115 DGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVME 174
Query: 224 -------------------------------------------GSLNSAIKAFNRIREKN 240
G + SA F+ + ++
Sbjct: 175 DAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRS 234
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
V+SW +I +NG ++ + F +M S I PN TL S+ + +L +G +H
Sbjct: 235 VVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHL 294
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
K + + ++++ +Y KCG +D+A ++F+ + N +TW+A+I A
Sbjct: 295 YAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAM------ 348
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK-TGF 419
H +A+ F + +G+ P+ + IL+ CS +E+G + +K G
Sbjct: 349 -----HGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGL 403
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQALQLFE 478
+ +V++ + G +E A + M + W +++ H ++ E
Sbjct: 404 QPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAE 463
Query: 479 DMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQK 517
++ + P+ G+ A SN +Y +LG +E + +
Sbjct: 464 TLM--ELAPHD---SGSYVALSN---LYASLGNWEAVAR 494
>gi|414865824|tpg|DAA44381.1| TPA: hypothetical protein ZEAMMB73_039747 [Zea mays]
Length = 645
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 322/584 (55%), Gaps = 21/584 (3%)
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-R 237
T L +C ++R G+Q+HA ++ T D + L LY++CG ++ A + F+ +
Sbjct: 72 ATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDEMPN 131
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGA 296
+ NV W +I A +G + + ML+ G ++P+ FT + C +L L G
Sbjct: 132 QGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLSAGR 191
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+VH ++ +A+++ V ++ +Y KCG +DEA +F+ + + WN+MIA Q
Sbjct: 192 EVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACGQ-- 249
Query: 357 DLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
NG EAL++ + + G+ P + T S ++ + AL +G ++H
Sbjct: 250 ----------NGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGW 299
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
+ GF S + T+L++MY K G + A +F ++ R LISW +MI GF H + A +
Sbjct: 300 RRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICGFGMHGHADHAFE 359
Query: 476 LFEDMLL-AGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF M A V P+ +TFVG L+AC++ GMV EA F++M Y IKP + HY CL+D+
Sbjct: 360 LFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLVDV 419
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
G +EA D IK M +P+ IW + GC+ H N+EL A ++L++L+P+D +Y
Sbjct: 420 LGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNY 479
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ +G+WE+ A V+ L L + SWI +K K + F D HP+S +I+
Sbjct: 480 VLLSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDIY 539
Query: 655 KVLDELVEKAKCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVV 709
+ L+ L GY + + D+E ++ HSE+LAIAFGL++TP + +LV
Sbjct: 540 EELERLEGLISQTGYVPDTTPVFHNVEDDEKRNMVWGHSERLAIAFGLISTPPRTKLLVT 599
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
K+ +C DCH IK+I+ + REII+RD R H FVNG C+C+D
Sbjct: 600 KNLRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKD 643
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 202/409 (49%), Gaps = 19/409 (4%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S+Y ++L+ CV +++ +HA ++ +G+ D + T LV++Y CG++ A++VFD
Sbjct: 69 SNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVFDE 128
Query: 135 LP-RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIR 192
+P + NV W LI Y ++ E AI ++ ML G+ P N T L AC++L +
Sbjct: 129 MPNQGNVFLWNVLIRAYARDGPCEAAIELYRAMLAYGSMKPDNFTYPPVLKACAALLDLS 188
Query: 193 LGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
G+++H V++ D V L +Y+ CG ++ A FN ++ W ++I ACG
Sbjct: 189 AGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTIRDAAVWNSMIAACG 248
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NG + L M +EGI P TL S S +L G ++H G + G+ S +
Sbjct: 249 QNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGRELHGYGWRRGFGSQDK 308
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
++ S++ +Y K G V A LF+ + H L++WNAMI G H A
Sbjct: 309 LKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICG-----------FGMHGHADHA 357
Query: 373 LSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG-TALV 430
+FS++ S + PD TF +L+ C+ +++ +++ L + + V T LV
Sbjct: 358 FELFSRMRSEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPTVQHYTCLV 417
Query: 431 NMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANHS---LSHQALQ 475
++ GR + AS V M + W +++ G H L+ ALQ
Sbjct: 418 DVLGHSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALQ 466
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 144/311 (46%), Gaps = 27/311 (8%)
Query: 275 NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF 334
N +I C ++R G Q+H+ + G + + ++ LY CG V A+++F
Sbjct: 67 NHSNYATILRSCVLSRAVRPGRQLHARLLVSGTGLDAVLATRLVDLYASCGHVSLARRVF 126
Query: 335 DGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSG-MKPDLYTF 391
D M + N+ WN +I +A+ +G E A+ ++ + + G MKPD +T+
Sbjct: 127 DEMPNQGNVFLWNVLIRAYAR------------DGPCEAAIELYRAMLAYGSMKPDNFTY 174
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+L C+ L+ L G ++H ++T + +DV V T L++MY KCG ++ A VF + +
Sbjct: 175 PPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWAVFNDTTI 234
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA-----GMVY 506
R W SMI + +AL L +M G+ P T V A++A + A G
Sbjct: 235 RDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASALPRGREL 294
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
G+ + K+K L+DM+ + G + A +++ + W+ I G
Sbjct: 295 HGYGWRRGFGSQDKLK------TSLLDMYAKSGWVMVAHVLFEQL-LHRELISWNAMICG 347
Query: 567 CRRHGNMELGF 577
HG+ + F
Sbjct: 348 FGMHGHADHAF 358
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 180/427 (42%), Gaps = 66/427 (15%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K +Y +L+ C LS +H +++T D FV T L+++Y KCG M+EA
Sbjct: 168 KPDNFTYPPVLKACAALLDLSAGREVHDRVMRTNWATDVFVCTGLIDMYAKCGCMDEAWA 227
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VF++ + W S+I+ QN +P A+ + +M G PT TL +A++A + +
Sbjct: 228 VFNDTTIRDAAVWNSMIAACGQNGRPAEALTLCRNMAAEGIAPTIATLVSAISAAAVASA 287
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ G+++H Y + + SL +Y+ G + A F ++ + ++SW +I
Sbjct: 288 LPRGRELHGYGWRRGFGSQDKLKTSLLDMYAKSGWVMVAHVLFEQLLHRELISWNAMICG 347
Query: 251 CGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
G +G A FS+M SE + P+ T + S C
Sbjct: 348 FGMHGHADHAFELFSRMRSEAQVMPDHITFVGVLSACN---------------------- 385
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
G+V EA+++FD M V + + + + ++D+ H+G
Sbjct: 386 -------------HGGMVQEAKEVFDLM--VTVYSIKPTVQHYTCLVDVL-----GHSGR 425
Query: 370 TEALSIFSKLNSSGM--KPDLYTFSSILTICS--RLVALEQGEQIHALTLKTGFLSDVVV 425
+ S K GM KPD + ++L C + V L + + L+ + V+
Sbjct: 426 FKEASDVIK----GMLVKPDSGIWGALLNGCKIHKNVELAELALQKLIELEPEDAGNYVL 481
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTL-----ISWTSM-------ITGFANHSLSHQA 473
L N+Y + G+ E A+RV M+ R L SW + + G A+H S
Sbjct: 482 ---LSNIYAESGKWEEAARVRKLMTNRGLKKIIACSWIELKGKFHGFLVGDASHPRSDDI 538
Query: 474 LQLFEDM 480
+ E +
Sbjct: 539 YEELERL 545
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/577 (33%), Positives = 324/577 (56%), Gaps = 17/577 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC +++ G+++HA +V +D + N + +Y CG + +AF+ ++ +N+
Sbjct: 40 LLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMKRRNI 99
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI-SSVCGTMLSLRVGAQVHS 300
+SW VI A +N + + F +ML +GIQP+ T TS+ ++ G L R VH
Sbjct: 100 VSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELH-RWAKLVHD 158
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
L +++G+ S+ V +++ +Y K G +D A+++FD ++ ++V+W+ MIA +AQ
Sbjct: 159 LALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIAAYAQ------ 212
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
+ H GTEAL +F ++++ G++ ++ TF +++ C + + IH ++ G
Sbjct: 213 ---TGH--GTEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIEAGLE 267
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
S+ V+GTAL+NMY KCG + A ++F +++ R ++ W++++ +A H AL+LF M
Sbjct: 268 SNTVLGTALLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYARHGHPRVALKLFTLM 327
Query: 481 LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGC 540
GVRPN VTFVG L AC + G V E +F + ++++++P H C++DM R G
Sbjct: 328 QQEGVRPNDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTAHHVHCMLDMLGRAGK 387
Query: 541 IEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDI 600
+EEA FI +M + + WS+F+ CR +G++E G AAE++ + P Y L +
Sbjct: 388 LEEAESFIARMPVKEEAITWSIFLGSCRSYGDLERGKRAAEKVFEFLPHCRAGYLTLASM 447
Query: 601 FVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDEL 660
+ AG E+ V L + S I ++ +V+ F HPQ+ EI+ LDEL
Sbjct: 448 YTDAGMPEEAEAVARLMESRCPKKEPGSSKIVVRGRVHEFCVRSQWHPQAKEIYSYLDEL 507
Query: 661 VEKAKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTP--IVSPILVVKSTTMCRDC 718
+A GY L + HSE+LA+AFG ++ P SPI ++K+ +CRDC
Sbjct: 508 HARALELGYVPDTRPLLLGSVERKL-HSERLALAFGAMSVPGKRNSPIHIIKNLRVCRDC 566
Query: 719 HNFIKIIT-SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H F K ++ ++ REIIVRD+ R H F +G C+C D+
Sbjct: 567 HEFTKFVSRTMEGREIIVRDTSRFHLFKDGVCSCGDY 603
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 200/396 (50%), Gaps = 16/396 (4%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYGKCGN 124
L +G + + + Y+ LL C K+L N +HA IV TG HQD F+ ++ +YGKCG
Sbjct: 26 LDQGSR-EVTEYLDLLLACGRSKNLGNGRRLHARIVATG-HQDVMFLANHILIMYGKCGG 83
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
ME+ + F + R N+VSW ++IS Y QN + AI +FL ML G P+ VT + L A
Sbjct: 84 MEDLSRAFSGMKRRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNA 143
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ E R K +H ++ V +L ++YS GS++ A + F+ + K+V+SW
Sbjct: 144 FAGPELHRWAKLVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSW 203
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I A + G + L F +M +EGIQ N T ++ C + + +H I+
Sbjct: 204 SNMIAAYAQTGHGTEALEMFHRMDAEGIQANVITFVTVVHACVLVARITDARTIHCRIIE 263
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G SN + +++ +Y KCG + EA+K+FD ++ ++V W+A++ +A+
Sbjct: 264 AGLESNTVLGTALLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILEAYAR---------- 313
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H AL +F+ + G++P+ TF +L C + +G A ++ L
Sbjct: 314 -HGHPRVALKLFTLMQQEGVRPNDVTFVGVLEACCHGGFVPEGRFHFASLVRDHELRPTA 372
Query: 425 VGT-ALVNMYKKCGRIERASRVFVEMSTR-TLISWT 458
+++M + G++E A M + I+W+
Sbjct: 373 HHVHCMLDMLGRAGKLEEAESFIARMPVKEEAITWS 408
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L +L +G + ++ S+L + A+++H ++ G V T L+N+Y K
Sbjct: 123 LRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKLVHDLALEVGFGSHPVVATALLNMYSKV 182
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G+++ A++VFD L +VVSW+++I+ Y Q A+ +F M G +T T +
Sbjct: 183 GSIDRARQVFDELAIKDVVSWSNMIAAYAQTGHGTEALEMFHRMDAEGIQANVITFVTVV 242
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
AC + I + IH +++ E +T +G +L ++Y CG L A K F+++ E++V+
Sbjct: 243 HACVLVARITDARTIHCRIIEAGLESNTVLGTALLNMYGKCGGLAEAKKIFDKLAERDVV 302
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
W+ ++ A +G L+ F+ M EG++PN+ T + C
Sbjct: 303 VWSAILEAYARHGHPRVALKLFTLMQQEGVRPNDVTFVGVLEAC 346
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 93/183 (50%), Gaps = 4/183 (2%)
Query: 391 FSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMS 450
+ +L C R L G ++HA + TG + + ++ MY KCG +E SR F M
Sbjct: 36 YLDLLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMK 95
Query: 451 TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGM-VYEAL 509
R ++SW ++I+ +A + S A+ +F MLL G++P+ VTF L A + + + L
Sbjct: 96 RRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPELHRWAKL 155
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
+ ++ + PV+ L++M+ ++G I+ A ++ + + V WS IA +
Sbjct: 156 VHDLALEVGFGSHPVVA--TALLNMYSKVGSIDRARQVFDELAIK-DVVSWSNMIAAYAQ 212
Query: 570 HGN 572
G+
Sbjct: 213 TGH 215
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 191/591 (32%), Positives = 323/591 (54%), Gaps = 12/591 (2%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+L C+ K L + IH +++++G D ++ ++ Y KC ++ +K+FD +
Sbjct: 247 SVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDK 306
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVVSWT++I+G +QNS A+ +F++M G P + L +C SL ++ G+Q+H
Sbjct: 307 NVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVH 366
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
AY +K ++D V N L +Y+ C SL A K FN + +++S+ +I +
Sbjct: 367 AYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLC 426
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ L F +M P S+ V ++ L + Q+H L IK G + + ++++
Sbjct: 427 EALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALI 486
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC V +A+ +F+ + ++V W AM +G+ Q + E+L ++
Sbjct: 487 DVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSE-----------NEESLKLYKC 535
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
L S +KP+ +TF++++T S + +L G+Q H +K GF D V LV+MY K G
Sbjct: 536 LQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGS 595
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
IE A + F+ + + W SMI +A H + +ALQ+FEDM++ G++PN VTFVG L+A
Sbjct: 596 IEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSA 655
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
CS+ G++ +F+ M ++ I+P ++HY+C++ + R G + EA +FI+KM + V
Sbjct: 656 CSHTGLLDLGFDHFDSMS-QFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAV 714
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+W ++ CR GN+ELG YAAE + P D SY +L +IF S G W +V ++
Sbjct: 715 VWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMD 774
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
+ + SWI + ++++ F D H SA I VLD L+ + K FGY
Sbjct: 775 ISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGY 825
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 280/513 (54%), Gaps = 17/513 (3%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C L+ A IH +VK G QD +V T L++ Y K +++A+ +FD L
Sbjct: 146 SVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVK 205
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+WT++I+GY + + ++++ +F M E P L + L+AC L+ + GKQIH
Sbjct: 206 TSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIH 265
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
YV++ D S+ N Y C + K F+R+ +KNV+SWTTVI C +N
Sbjct: 266 CYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHR 325
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L F +M G P+ F TS+ + CG++++L G QVH+ IK+ ++ V+N ++
Sbjct: 326 DALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLI 385
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KC + +A+K+F+ M+ ++LV++NAMI G+++ +D L EAL +F +
Sbjct: 386 DMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSR-----QDKL------CEALDLFRE 434
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ S P L F S+L + + L LE QIH L +K G D G+AL+++Y KC R
Sbjct: 435 MRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSR 494
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ A VF E+ + ++ WT+M +G+ S + ++L+L++ + ++ ++PN+ TF + A
Sbjct: 495 VGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITA 554
Query: 499 CSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
SN A + + + ++++ + P + + L+DM+ + G IEEA +++ +
Sbjct: 555 ASNIASLRHGQQFHNQVIKMGFDDDPFVAN--TLVDMYAKSGSIEEAHKAFISTNWK-DT 611
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLL--KLKP 588
W+ IA +HG E E ++ LKP
Sbjct: 612 ACWNSMIATYAQHGEAEKALQVFEDMIMEGLKP 644
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 246/508 (48%), Gaps = 35/508 (6%)
Query: 96 IHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNS 154
IH+ IV G H+ D F++ L++ Y K + A K+FD + N+V+W+S++S Y +S
Sbjct: 60 IHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHS 119
Query: 155 QPELAIHVFLDMLEAGN-YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
A+ +F+ + + N P L + + AC+ + QIH VVK D V
Sbjct: 120 HCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVC 179
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
SL Y+ ++ A F+ ++ K +WTT+I + G + L+ F +M +
Sbjct: 180 TSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVC 239
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+++ L+S+ S C + L G Q+H ++ G ++ + N + Y KC V +KL
Sbjct: 240 PDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKL 299
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M N+V+W +IAG Q S H +AL +F ++ G PD + +S
Sbjct: 300 FDRMVDKNVVSWTTVIAGCMQN--------SFHR---DALDLFVEMARMGWNPDAFGCTS 348
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L C LVALE+G Q+HA +K +D V L++MY KC + A +VF M+
Sbjct: 349 VLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAID 408
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
L+S+ +MI G++ +AL LF +M L+ P + FV L V +L + E
Sbjct: 409 LVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLG-------VSASLYHLE 461
Query: 514 MMQKEY----KIKPVMDHYM--CLIDMF---VRLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
+ + + K +D + LID++ R+G F+ I+ D V+W+
Sbjct: 462 LSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDI----VVWTAMF 517
Query: 565 AGCRRHGNME--LGFYAAEQLLKLKPKD 590
+G + E L Y Q+ +LKP +
Sbjct: 518 SGYTQQSENEESLKLYKCLQMSRLKPNE 545
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+VSLL + L + IH I+K G D F + L++VY KC + +A+ VF+ +
Sbjct: 447 FVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQ 506
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
++V WT++ SGY Q S+ E ++ ++ + + P T +TA S++ S+R G+Q
Sbjct: 507 DKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQ 566
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
H V+K +DD V N+L +Y+ GS+ A KAF K+ W ++I ++GE
Sbjct: 567 FHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGE 626
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
A + L+ F M+ EG++PN T + S C L +G + G +
Sbjct: 627 AEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVC 686
Query: 317 IMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
++ L + G + EA++ + M V W ++++
Sbjct: 687 MVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 1/186 (0%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ +++ N SL + + H ++K G D FV LV++Y K G++EEA K F +
Sbjct: 547 TFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFIST 606
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ W S+I+ Y Q+ + E A+ VF DM+ G P VT L+ACS + LG
Sbjct: 607 NWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGF 666
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN-VMSWTTVIGACGEN 254
+ ++ E + SL G L A + ++ K + W +++ AC +
Sbjct: 667 DHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVS 726
Query: 255 GEAVQG 260
G G
Sbjct: 727 GNVELG 732
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 207/617 (33%), Positives = 338/617 (54%), Gaps = 21/617 (3%)
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTN--VTLGTALTACSSLESIRLGKQIHAYVVK 203
+ISG+V+NS E +I VF DM+ GN P T+ L A + L+ ++LG QI +K
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMV-LGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIK 59
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
S+ L SL+S CG + A F IR+K+++S +I NGE +R
Sbjct: 60 CGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRL 119
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F ++LS G + + T+ + V + +H +KLG S+ V ++ +Y +
Sbjct: 120 FKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCR 179
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSS 382
+ A++LFD + L +WNAMI+G Q NG T+A +S+F + +
Sbjct: 180 LNEMIFARQLFDESAEKTLASWNAMISGCTQ------------NGLTDAAISLFQTMQKN 227
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
+ P+ T +SIL+ C+++ AL GE +H+L F S+V V TAL++MY KCG I A
Sbjct: 228 NVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVA 287
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA 502
+F M + ++W +MI+G+ H +AL+LF DML + V+P +TF+ L ACS+A
Sbjct: 288 RELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHA 347
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
G+V E G F M ++ +P+ +HY C++D+ R G +++A +FIK M EP +W
Sbjct: 348 GLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGA 407
Query: 563 FIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKL 622
+ C H + L A+E+L +L P++ Y ++ +I+ ++ A V+ + ++++L
Sbjct: 408 LLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRL 467
Query: 623 SETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD--- 679
++T + I I + F D HPQS I+ LD+L K G++ + + L D
Sbjct: 468 AKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEE 527
Query: 680 --EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRD 737
+E HSEKLAIAFGL++T + I ++K+ +C DCHN+ K ++ +T R I+VRD
Sbjct: 528 EEKELTMKVHSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRD 587
Query: 738 SKRLHKFVNGHCTCRDF 754
+ R H F +G C+C D+
Sbjct: 588 ANRFHHFKDGLCSCGDY 604
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 190/379 (50%), Gaps = 12/379 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
VL GP+ ++ +++L + L I +K G + ++T L++++ KCG
Sbjct: 22 VLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGE 81
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+E A+ +F + + +++S ++ISG+ N + E ++ +F ++L +G ++ T+ +
Sbjct: 82 VEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPV 141
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S L IH + VK +SV +L ++Y + A + F+ EK + SW
Sbjct: 142 YSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASW 201
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I C +NG + F M + PN T+TSI S C + +L +G VHSL
Sbjct: 202 NAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKS 261
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+ SN+ V +++ +Y KCG + A++LFD M N VTWNAMI+G+
Sbjct: 262 NRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYG----------- 310
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDV 423
H G EAL +F + SS +KP TF S+L CS +++G+ I H + GF
Sbjct: 311 LHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLA 370
Query: 424 VVGTALVNMYKKCGRIERA 442
+V++ + G++++A
Sbjct: 371 EHYACMVDILGRAGQLKKA 389
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 219/730 (30%), Positives = 360/730 (49%), Gaps = 101/730 (13%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSL 146
+ SLS A HAHI+KTG ++ E ++F L
Sbjct: 25 KASLSQA---HAHILKTGI------------------SLPETIQIFSKLNHF-------- 55
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
G+V I VF ML G P + L T + C++L +++ GKQ+H + +
Sbjct: 56 --GHV--------IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR----------------------------- 237
D+ V +SL +Y L A F+++
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 238 ------EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
E N++SW +I +G + + F M EG++P+ +++S+ G +
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+G Q+H IK G + V ++++ +Y KC E +F+ M V++ NA++ G
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 352 HAQ--MMDLAKD--------DLS-----------AHNG-GTEALSIFSKLNSSGMKPDLY 389
++ ++D A + DL+ + NG EAL +F ++ G+KP+
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 390 TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
T +L C + AL G+ H +L+ G +DV VG+AL++MY KCGR+ + F M
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMM 405
Query: 450 STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEAL 509
R L+SW S++ G+A H + +A+ +FE M G +P+ V+F L+AC+ G+ E
Sbjct: 406 PNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGW 465
Query: 510 GYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRR 569
YF+ M + + ++ M+HY C++ + R G +EEA+ IK+M FEP+ +W ++ CR
Sbjct: 466 FYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRV 525
Query: 570 HGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWS 629
H ++LG AA+++ +L+P++ +Y +L +I+ S W +V +V+++ R L + +S
Sbjct: 526 HNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYS 585
Query: 630 WIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF-----ELTDEESAS 684
WI IK+KV+ D HPQ +I + L +L + K GY F E D+E
Sbjct: 586 WIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQIL 645
Query: 685 VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF 744
HSEKLA+ GLLNT P+ V+K+ +CRDCH IK I+ REI VRD+ R H+F
Sbjct: 646 CGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQF 705
Query: 745 VNGHCTCRDF 754
G C+C D+
Sbjct: 706 KGGVCSCGDY 715
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 213/454 (46%), Gaps = 80/454 (17%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+LT+G + ++++ C +L + +H + +G D V++ L+++Y + +
Sbjct: 65 MLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDH 124
Query: 125 MEEAQKVFDNLPR-----------------------------------INVVSWTSLISG 149
+++A+ VFD LP+ +N+VSW +ISG
Sbjct: 125 LKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISG 184
Query: 150 YVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD 209
+ ++ A+ +F +M G P ++ + L A L+ +G QIH YV+K D
Sbjct: 185 FNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPD 244
Query: 210 TSVGNSLCSLYSTC-------------------------------GSLNSAIKAFNRIR- 237
V ++L +Y C G +++A++ F + +
Sbjct: 245 KFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKG 304
Query: 238 -EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
+ NV+SWT++I +C +NG+ ++ L F +M EG++PN T+ + CG + +L G
Sbjct: 305 MDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGK 364
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
H ++ G +++ V ++++ +Y KCG + ++ FD M + NLV+WN+++AG+A
Sbjct: 365 AAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAM-- 422
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-QIHALTL 415
H EA++IF + G KPD +F+ +L+ C++ E+G +++
Sbjct: 423 ---------HGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSR 473
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
G + + + +V + + GR+E A + +M
Sbjct: 474 NHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQM 507
>gi|302774719|ref|XP_002970776.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
gi|300161487|gb|EFJ28102.1| hypothetical protein SELMODRAFT_94128 [Selaginella moellendorffii]
Length = 750
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 221/746 (29%), Positives = 353/746 (47%), Gaps = 82/746 (10%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C + + L + IHAHI F+ LV +YGKCG++ +A++VFD++
Sbjct: 16 SIVRACGSSRDLIAGKRIHAHIADANLGNYRFLANLLVEMYGKCGSLHDARRVFDSIHSP 75
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDM------LEAGNYPTNVTLGTALTACSSLESI- 191
N+ SW L+ Y QN + A F M G N G L+A E +
Sbjct: 76 NIFSWNLLVVAYTQNGRLREARQCFEKMPGKNVVCWTGLITANAQSGYVLSARGVFEKMP 135
Query: 192 ---RL-----------------GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
R+ K IH +V+ + + + +Y +CGSL+ A
Sbjct: 136 QRNRVTWTAMVWCLVNAGDVIEAKIIHEQLVQMGIAEQLPLAKFIVQMYLSCGSLDEARN 195
Query: 232 AFNRIREKNVMSWTTVIGACG-----------------------------------ENGE 256
F+ + K+V WT VI A +NG+
Sbjct: 196 LFDLLPSKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTGPYSVLVWNAIISASFQNGQ 255
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L F KM +G++P+ TL + C +L G V L G SN V +S
Sbjct: 256 LKGSLELFWKMRRQGVRPDSLTLATALDTCAASGNLHEGRMVAELVTVYGLQSNDLVNSS 315
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++++Y KCG +D+A+++FDGM+H V W+ MIA +++ H +EA +
Sbjct: 316 LVHMYGKCGSLDDARRVFDGMAHRGPVVWSKMIAAYSE-----------HGHCSEAFVLL 364
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKC 436
++ S+ M D + + L C L+ALE G+++H G DV VG ALV+MY KC
Sbjct: 365 KEMESAKMVADASSCVAFLQACGSLLALEAGQEVHGWITMKGLEQDVFVGNALVDMYGKC 424
Query: 437 GRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
G +E A VF M + SW M+ + + S +A+Q+F ML GV+PN TF L
Sbjct: 425 GSVEEAWAVFDNMKEKNWFSWNFMVEAYCSSGYSTEAIQVFLQMLQEGVKPNAKTFTSVL 484
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
AC +AG + E + + M +Y + P+ +HY C + + R G ++EA +++KK+ +
Sbjct: 485 VACGHAGFIREGILHLVYMSSDYDVVPIAEHYACAVGLLGRSGWVKEAEEYVKKLP-DAE 543
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W + CR HG+++ G AAE LL+ P SYA++ ++ + R +D A V+
Sbjct: 544 ASVWDALVTACRIHGDLDRGRSAAESLLECSPHAARSYAVVAGLYDALARSDDAARVRET 603
Query: 617 TREEKLSETDDWSWIRIKDKV-YSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF 675
+ L+E S I + + + F D H + I L++L ++ GY S
Sbjct: 604 MTSKGLTEERVTSSILVGNTTCHEFITADTRHKRIQGIHAELEDLGQRIAKDGYAPDASK 663
Query: 676 ELTDEESAS------VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
L E + YHSE+LA+ G + P+ ++++ MC DCH IK ++
Sbjct: 664 LLMHERAEEQRQESLFYHSERLAVGLGAIKIRGDCPLRIIRNFRMCADCHTAIKFMSKAM 723
Query: 730 AREIIVRD-SKRLHKFVNGHCTCRDF 754
R II+RD S +LH+FV+GHC CRD+
Sbjct: 724 GRTIILRDGSSQLHRFVDGHCACRDY 749
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 208/463 (44%), Gaps = 58/463 (12%)
Query: 44 LIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT 103
LI N S V S A V + P+ ++ +++ VN + A+IIH +V+
Sbjct: 114 LITANAQSGYVLS-----ARGVFEKMPQRNRVTWTAMVWCLVNAGDVIEAKIIHEQLVQM 168
Query: 104 GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV------------ 151
G + + F+V +Y CG+++EA+ +FD LP +V WT++I+ Y
Sbjct: 169 GIAEQLPLAKFIVQMYLSCGSLDEARNLFDLLPSKDVGMWTAVIAAYAKYGRWQEAIKLF 228
Query: 152 -----------------------QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
QN Q + ++ +F M G P ++TL TAL C++
Sbjct: 229 ETMESRTGPYSVLVWNAIISASFQNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCAAS 288
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++ G+ + V Y + + V +SL +Y CGSL+ A + F+ + + + W+ +I
Sbjct: 289 GNLHEGRMVAELVTVYGLQSNDLVNSSLVHMYGKCGSLDDARRVFDGMAHRGPVVWSKMI 348
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A E+G + +M S + + + + CG++L+L G +VH G
Sbjct: 349 AAYSEHGHCSEAFVLLKEMESAKMVADASSCVAFLQACGSLLALEAGQEVHGWITMKGLE 408
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++ V N+++ +Y KCG V+EA +FD M N +WN M+ + +
Sbjct: 409 QDVFVGNALVDMYGKCGSVEEAWAVFDNMKEKNWFSWNFMVEAYC-----------SSGY 457
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV--- 425
TEA+ +F ++ G+KP+ TF+S+L C + +G +H + + + + DVV
Sbjct: 458 STEAIQVFLQMLQEGVKPNAKTFTSVLVACGHAGFIREG-ILHLVYMSSDY--DVVPIAE 514
Query: 426 -GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
V + + G ++ A ++ W +++T H
Sbjct: 515 HYACAVGLLGRSGWVKEAEEYVKKLPDAEASVWDALVTACRIH 557
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 198/448 (44%), Gaps = 73/448 (16%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L + + AC S + GK+IHA++ + + N L +Y CGSL+ A + F+ I
Sbjct: 14 LASIVRACGSSRDLIAGKRIHAHIADANLGNYRFLANLLVEMYGKCGSLHDARRVFDSIH 73
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI------------------------- 272
N+ SW ++ A +NG + + F KM + +
Sbjct: 74 SPNIFSWNLLVVAYTQNGRLREARQCFEKMPGKNVVCWTGLITANAQSGYVLSARGVFEK 133
Query: 273 --QPNEFTLTSISSV---CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
Q N T T++ G ++ ++ +H +++G A L + I+ +YL CG +
Sbjct: 134 MPQRNRVTWTAMVWCLVNAGDVIEAKI---IHEQLVQMGIAEQLPLAKFIVQMYLSCGSL 190
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQ-----------------------MMDLAKDDLS 364
DEA+ LFD + ++ W A+IA +A+ ++ A S
Sbjct: 191 DEARNLFDLLPSKDVGMWTAVIAAYAKYGRWQEAIKLFETMESRTGPYSVLVWNAIISAS 250
Query: 365 AHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
NG + +L +F K+ G++PD T ++ L C+ L +G + L G S+
Sbjct: 251 FQNGQLKGSLELFWKMRRQGVRPDSLTLATALDTCAASGNLHEGRMVAELVTVYGLQSND 310
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+V ++LV+MY KCG ++ A RVF M+ R + W+ MI ++ H +A L ++M A
Sbjct: 311 LVNSSLVHMYGKCGSLDDARRVFDGMAHRGPVVWSKMIAAYSEHGHCSEAFVLLKEMESA 370
Query: 484 GVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFV 536
+ + + V L AC + AG E G+ M E D ++ L+DM+
Sbjct: 371 KMVADASSCVAFLQACGSLLALEAGQ--EVHGWITMKGLE------QDVFVGNALVDMYG 422
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFI 564
+ G +EEA+ M E N W+ +
Sbjct: 423 KCGSVEEAWAVFDNMK-EKNWFSWNFMV 449
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD 133
SS V+ LQ C + +L + +H I G QD FV LV++YGKCG++EEA VFD
Sbjct: 376 ASSCVAFLQACGSLLALEAGQEVHGWITMKGLEQDVFVGNALVDMYGKCGSVEEAWAVFD 435
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
N+ N SW ++ Y + AI VFL ML+ G P T + L AC IR
Sbjct: 436 NMKEKNWFSWNFMVEAYCSSGYSTEAIQVFLQMLQEGVKPNAKTFTSVLVACGHAGFIRE 495
Query: 194 GKQIHAY------VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
G Y VV +VG L G + A + ++ + W +
Sbjct: 496 GILHLVYMSSDYDVVPIAEHYACAVG-----LLGRSGWVKEAEEYVKKLPDAEASVWDAL 550
Query: 248 IGACGENGEAVQG 260
+ AC +G+ +G
Sbjct: 551 VTACRIHGDLDRG 563
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 341/649 (52%), Gaps = 29/649 (4%)
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
T ++ Y + + +A +FD +P +VVSW S+ISG V+ A+ +F +M E
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER--- 126
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIK 231
+ V+ + C R GK A + YQ DT+ NS+ Y G ++ A+K
Sbjct: 127 -SVVSWTAMVNGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALK 180
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
F ++ KNV+SWTT+I +N + + L F ML I+ T + + C +
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+G QVH L IKLG+ V S++ Y C + +++K+FD H + W A+++G
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ S + +ALSIFS + + + P+ TF+S L CS L L+ G+++H
Sbjct: 301 Y-----------SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
+ +K G +D VG +LV MY G + A VF+++ ++++SW S+I G A H
Sbjct: 350 GVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGK 409
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK-IKPVMDHYMC 530
A +F M+ P+++TF G L+ACS+ G + + F M I + HY C
Sbjct: 410 WAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTC 469
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G ++EA + I++M +PNE++W ++ CR H +++ G AA + L K
Sbjct: 470 MVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKS 529
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L +I+ SAGRW +V+ ++ ++ + + SW+ I+ K + F D P
Sbjct: 530 SAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHC 587
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
+ I++ L+ L EK K GY L D +E YHSE+LAIAFGL+NT S
Sbjct: 588 SRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSA 647
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ V+K+ +C DCH IK+I+ + REI++RD R H F NG C+C D+
Sbjct: 648 VTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDY 696
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 198/410 (48%), Gaps = 18/410 (4%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+ + E P+ S+ +++ C + AE + + +D +V+ Y +
Sbjct: 116 AVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQM----PVKDTAAWNSMVHGYLQ 171
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G +++A K+F +P NV+SWT++I G QN + A+ +F +ML T+
Sbjct: 172 FGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCV 231
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+TAC++ + +G Q+H ++K + V SL + Y+ C + + K F+ + V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
WT ++ N + L FS ML I PN+ T S + C + +L G ++H +
Sbjct: 292 AVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGV 351
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+KLG ++ V NS++ +Y G V++A +F + ++V+WN++I G AQ
Sbjct: 352 AVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ------- 404
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFL 420
H G A IF ++ +PD TF+ +L+ CS LE+G ++ + ++ +
Sbjct: 405 ----HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460
Query: 421 SDVVVG-TALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITGFANHS 468
+ T +V++ +CG+++ A + M + + W ++++ HS
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHS 510
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 170/389 (43%), Gaps = 52/389 (13%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K + + ++ C N + +H I+K G + +V L+ Y C + +++K
Sbjct: 222 KSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRK 281
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD V WT+L+SGY N + E A+ +F ML P T + L +CS+L +
Sbjct: 282 VFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGT 341
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK++H VK E D VGNSL +YS G++N A+ F +I +K+++SW ++I
Sbjct: 342 LDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVG 401
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
C ++G F +M+ +P+E T T + S C
Sbjct: 402 CAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACS----------------------- 438
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLF----DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
CG +++ +KLF G++H+ + I + M+D+ L
Sbjct: 439 ------------HCGFLEKGRKLFYYMSSGINHI-----DRKIQHYTCMVDI----LGRC 477
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA + ++ +KP+ + ++L+ C +++GE+ A S
Sbjct: 478 GKLKEAEELIERMV---VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY- 533
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLI 455
L N+Y GR S++ V+M ++
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIM 562
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 212/622 (34%), Positives = 338/622 (54%), Gaps = 33/622 (5%)
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVS I+ +V+ E A +VF M + T VT T L+ + + K+ H
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKM----SVRTTVTWNTMLSGYTKVAGKV--KEAH 125
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
K D S N + Y + +A+ FN++ K++ SW T+I +NG+
Sbjct: 126 ELFDKIPEPDSVSY-NIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQ 184
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH-SLGIKLGYASNLRVRNSI 317
+ FS M + N + +++ S L +++ ++G+K ++ V ++
Sbjct: 185 KAFDLFSVM----PEKNGVSWSAMISGYVEHGDLEAAEELYKNVGMK-----SVVVETAM 235
Query: 318 MYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFS 377
+ Y+K G V+ A+++F M+ NLVTWN+MIAG+ + + A +G L +F
Sbjct: 236 LTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVE-------NCRAEDG----LKVFK 284
Query: 378 KLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ S ++P+ + SS+L CS L AL G Q+H L K+ D T+L++MY KCG
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCG 344
Query: 438 RIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALA 497
++ A ++F+EM + +ISW +MI+G+A H +AL LF+ M ++P+ +TFV +
Sbjct: 345 DLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVIL 404
Query: 498 ACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
AC++AG V + YF+ M+KE+ I+ HY C+ID+ R G ++EA IK+M F+P+
Sbjct: 405 ACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHA 464
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLT 617
I+ + CR H N++L +AA LL L P Y L +I+ + +W+ VA V+ +
Sbjct: 465 AIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMM 524
Query: 618 REEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL 677
+E + + +SWI IK + F+ +D LHP+ I K L+EL K K GY F L
Sbjct: 525 KEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFAL 584
Query: 678 TD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTARE 732
D +E ++HSEKLAIAFGL+ T +PI V K+ +C DCH IK I+++ RE
Sbjct: 585 HDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPIRVFKNLRVCGDCHRAIKFISAIEKRE 644
Query: 733 IIVRDSKRLHKFVNGHCTCRDF 754
IIVRD+ R H F NG C+C D+
Sbjct: 645 IIVRDTTRFHHFRNGFCSCGDY 666
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 25/406 (6%)
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
Y + +E A F+ +P ++ SW +LISG+ QN Q + A +F M E V+
Sbjct: 146 YLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEK----NGVSW 201
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
++ + ++++ V V ++ + Y G + A + F R+
Sbjct: 202 SAMISGYVEHGDLEAAEELYKNV----GMKSVVVETAMLTGYMKFGKVELAERIFQRMAV 257
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
KN+++W ++I EN A GL+ F M+ ++PN +L+S+ C + +L +G Q+
Sbjct: 258 KNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQM 317
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
H L K + + S++ +Y KCG +D A KLF M ++++WNAMI+G+AQ
Sbjct: 318 HQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQ---- 373
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKT 417
H G +AL +F K+ + MKPD TF +++ C+ ++ G Q ++ +
Sbjct: 374 -------HGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEF 426
Query: 418 GFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL- 476
G + V T ++++ + GR++ A + EM + + + G H+ L L
Sbjct: 427 GIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACR---IHKNLDLA 483
Query: 477 -FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
F L + P T LA A ++ + M KE+ +
Sbjct: 484 EFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNV 529
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 5/279 (1%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
Q+A + + P+ S+ +++ V L AE ++ ++ + V T ++ Y
Sbjct: 184 QKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAAEELYKNV----GMKSVVVETAMLTGY 239
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
K G +E A+++F + N+V+W S+I+GYV+N + E + VF M+E+ P ++L
Sbjct: 240 MKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLS 299
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L CS+L ++ LG+Q+H V K DT+ SL S+Y CG L+SA K F + K
Sbjct: 300 SVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRK 359
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-V 298
+V+SW +I ++G + L F KM + ++P+ T ++ C + +G Q
Sbjct: 360 DVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYF 419
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
S+ + G + ++ L + G +DEA L M
Sbjct: 420 KSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEM 458
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 58/314 (18%)
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD------ 361
AS++ N + +++ ++ A+ +F+ MS VTWN M++G+ ++ K+
Sbjct: 70 ASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFD 129
Query: 362 -----DLSAHN----------GGTEALSIFSKL-----------------NSSGMKP-DL 388
D ++N G AL+ F+K+ N K DL
Sbjct: 130 KIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDL 189
Query: 389 Y---------TFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRI 439
+ ++S++++ LE E+++ K + VVV TA++ Y K G++
Sbjct: 190 FSVMPEKNGVSWSAMISGYVEHGDLEAAEELY----KNVGMKSVVVETAMLTGYMKFGKV 245
Query: 440 ERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
E A R+F M+ + L++W SMI G+ + + L++F+ M+ + VRPN ++ L C
Sbjct: 246 ELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGC 305
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNE 557
SN + LG +M Q K D C LI M+ + G ++ A+ +M +
Sbjct: 306 SNLSAL--PLGR-QMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMP-RKDV 361
Query: 558 VIWSVFIAGCRRHG 571
+ W+ I+G +HG
Sbjct: 362 ISWNAMISGYAQHG 375
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS-HQALQLFED 479
SDVV + + + +E A VF +MS RT ++W +M++G+ + +A +LF+
Sbjct: 71 SDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELFDK 130
Query: 480 MLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMD--HYMCLIDMFVR 537
+ P+ V++ L + V AL +F M PV D + LI F +
Sbjct: 131 I----PEPDSVSYNIMLVCYLRSYGVEAALAFFNKM-------PVKDIASWNTLISGFAQ 179
Query: 538 LGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
G +++AFD M E N V WS I+G HG++E AAE+L K
Sbjct: 180 NGQMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLE----AAEELYK 222
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 211/625 (33%), Positives = 334/625 (53%), Gaps = 49/625 (7%)
Query: 176 VTLGTALTACSSLESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ L T+C + + KQ+HA +K Q +D + + + ++ A F
Sbjct: 20 LILSKPFTSCKTPRDL---KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRDIDYARAVFR 76
Query: 235 RIREKNVMSWTTVIGACGE-NGEAVQ--GLRFFSKMLSEG-IQPNEFTLTSISSVCGTML 290
++ E N W T++ E N E +Q L FS ML +G ++PN FT S+ C
Sbjct: 77 QMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARAS 136
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLF-------DGMSHV--- 340
LR G Q+H L +K G+ + V ++++ +Y+ C ++++A LF DG +
Sbjct: 137 RLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELD 196
Query: 341 ------NLVTWNAMIAGHAQMMDLAK-----DDLS--------------AHNGG-TEALS 374
N+V WN MI G ++ D+ D++ A NG EA++
Sbjct: 197 KRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAIN 256
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+F ++ SS + P+ T S+L +R+ ALE G+ IH K D V+G+ALV+MY
Sbjct: 257 LFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYS 316
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KCG I+ A +VF + R I+W+++I FA H + A+ F M AGV PN V ++G
Sbjct: 317 KCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIG 376
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+ACS+AG+V E +F M K ++P ++HY C++D+ R G +EEA + I+ M E
Sbjct: 377 ILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIE 436
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
P++VIW + C+ H N+++G AE L++L P D SY L +++ S G WE VA V+
Sbjct: 437 PDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVR 496
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-- 672
+ + + SWI I ++ F D H ++ EI +L E+ K + GY+
Sbjct: 497 LKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTL 556
Query: 673 ESFELTDEES---ASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
E F TDE+ A YHSEK+A+AFGL++T P+ +VK+ +C DCH +K+I+ +
Sbjct: 557 EVFLNTDEQERARALQYHSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIY 616
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R+IIVRD KR H+F +G C+C D+
Sbjct: 617 KRQIIVRDRKRFHQFEHGSCSCMDY 641
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 188/448 (41%), Gaps = 93/448 (20%)
Query: 50 NSEPVRSLGFQEALSVLTEGP-KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
N E ++S ++L +G K ++ S+L+ C L + IH IVK G H+D
Sbjct: 97 NDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHED 156
Query: 109 FFVMTFLVNVYGKCGNMEEA---------------------------------------- 128
FV++ LV +Y C ME+A
Sbjct: 157 EFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVR 216
Query: 129 -------QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+ +FD +P+ +VVSW +ISGY QN AI++F +M + P VTL +
Sbjct: 217 LGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSV 276
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L A + + ++ LGK IH Y K + E D +G++L +YS CGS++ A++ F + ++N
Sbjct: 277 LPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNA 336
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W+ +IGA +G A + F M G+ PN+ I S C
Sbjct: 337 ITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACS-------------- 382
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
GLV+E + F M V +V I + M+DL
Sbjct: 383 ---------------------HAGLVEEGRSFFSHM--VKVVGLQPRIEHYGCMVDLLGR 419
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ H E L + + ++PD + ++L C L+ GE++ A TL
Sbjct: 420 --AGHLEEAEEL-----IRNMPIEPDDVIWKALLGACKMHKNLKMGERV-AETLMELAPH 471
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEM 449
D AL N+Y G E +RV ++M
Sbjct: 472 DSGSYVALSNLYASLGNWEAVARVRLKM 499
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/601 (32%), Positives = 327/601 (54%), Gaps = 28/601 (4%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ +S ++H+ ++K + + + N+L +Y CG + A++ F+ + ++
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFDEMPNRDH 69
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
+SW +++ A + + L + M + +G+QP+ F I C ++ LR+G QVH+
Sbjct: 70 VSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQVHA 129
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA------Q 354
+ + + V++S++ +Y KCG DEA+ +FD + N V+W +MI+G+A +
Sbjct: 130 RFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISGYARSGRKCE 189
Query: 355 MMDL--------------AKDDLSAHNGGTEALSIFSKLNSSGMK-PDLYTFSSILTICS 399
MDL L G + S+F+++ G+ D SS++ C+
Sbjct: 190 AMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCA 249
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L LE G+QIH L + GF S + + ALV+MY KC I A +F M + +ISWTS
Sbjct: 250 NLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRKDVISWTS 309
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
+I G A H + +AL L+++M+L+ ++PN+VTFVG L ACS+AG+V F M +Y
Sbjct: 310 IIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDY 369
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
I P + HY CL+D+ R G ++EA + + K+ F+P+E W+ ++ C RH N+E+G
Sbjct: 370 SINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRI 429
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
A+++L LKP+D +Y +L +++ A W V+ V+ L ++ + +S I
Sbjct: 430 ADRVLDLKPEDPSTYILLSNVYAGAEMWGSVSKVRKLMSSMEVRKEPGYSSIDFGKDSQV 489
Query: 640 FKPNDGL-HPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAI 693
F + HP EI +L +L + + GY SF L D +E +HSE+LA+
Sbjct: 490 FHAGESCDHPMKNEICNLLKDLDAEMRKRGYVPNTSFVLYDIEQQEKEKQLFWHSERLAV 549
Query: 694 AFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
A+GLL + I +VK+ +C DCHN +K I+ + REI+VRD+ R H F G C+C D
Sbjct: 550 AYGLLKAVPGTIIRIVKNLRICGDCHNVLKFISDIVKREIMVRDATRYHHFKEGKCSCND 609
Query: 754 F 754
F
Sbjct: 610 F 610
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 205/432 (47%), Gaps = 46/432 (10%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ S ++ LQ C R+S S A +H+ I+K G + + L++VYGKCG + +A ++
Sbjct: 1 MNISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQL 60
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLES 190
FD +P + VSW S+++ + + P + + M G P + + ACSSL
Sbjct: 61 FDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGY 120
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+RLGKQ+HA + DD V +SL +Y+ CG + A F+ I KN +SWT++I
Sbjct: 121 LRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARAVFDSILFKNSVSWTSMISG 180
Query: 251 CG-------------------------------ENGEAVQGLRFFSKMLSEGIQ-PNEFT 278
++G + F++M EGI +
Sbjct: 181 YARSGRKCEAMDLFLQAPVRNLFSWTALISGLIQSGHGIYSFSLFNEMRREGIDIVDPLV 240
Query: 279 LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
L+S+ C + L +G Q+H L I LG+ S L + N+++ +Y KC + A+ +F M
Sbjct: 241 LSSVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMP 300
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
++++W ++I G AQ H EAL+++ ++ S +KP+ TF +L C
Sbjct: 301 RKDVISWTSIIVGTAQ-----------HGKAEEALTLYDEMVLSRIKPNEVTFVGLLYAC 349
Query: 399 SRLVALEQGEQI-HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LIS 456
S + +G ++ ++T + T L+++ + G ++ A + ++ + +
Sbjct: 350 SHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPT 409
Query: 457 WTSMITGFANHS 468
W S+++ H+
Sbjct: 410 WASLLSACMRHN 421
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S++ C N L + IH ++ G F+ LV++Y KC ++ A+ +F +PR
Sbjct: 243 SVVGGCANLALLELGKQIHGLVIALGFESCLFISNALVDMYAKCSDILAAKDIFYRMPRK 302
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI- 197
+V+SWTS+I G Q+ + E A+ ++ +M+ + P VT L ACS + G+++
Sbjct: 303 DVISWTSIIVGTAQHGKAEEALTLYDEMVLSRIKPNEVTFVGLLYACSHAGLVSRGRELF 362
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIGACGENGE 256
+ Y L L S G L+ A ++I K + +W +++ AC +
Sbjct: 363 RSMTTDYSINPSLQHYTCLLDLLSRSGHLDEAENLLDKIPFKPDEPTWASLLSACMRHNN 422
Query: 257 AVQGLRFFSKMLS-EGIQPNEFTLTS 281
G+R ++L + P+ + L S
Sbjct: 423 LEMGVRIADRVLDLKPEDPSTYILLS 448
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/638 (32%), Positives = 348/638 (54%), Gaps = 47/638 (7%)
Query: 69 GPKVQTSSYVS-LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN--- 124
GP + SY S L++ C KSL A+ +HA ++K G + F+ +++Y + G
Sbjct: 31 GPLATSLSYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGND 90
Query: 125 ----------------------------MEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
+E A+ VFD +P+ +VVSW ++ISGYV
Sbjct: 91 SLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLF 150
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNS 215
+ A F +M +AG P+ T T L+ SS + R GKQIHA +++ + + VGNS
Sbjct: 151 DDAFRFFSEMQKAGIRPSGFTYSTLLSFVSS--ACR-GKQIHASMIRNGVDLSNVVVGNS 207
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y G ++ A F + E ++ SW ++I +CG++G LR F M S G P+
Sbjct: 208 LIGMYGKFGVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPD 267
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+FT++++ +VC + L G Q+ +L I++G+ SN V ++ + L+ KC ++++ ++F+
Sbjct: 268 QFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFE 327
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
+ + V NAMI+ +A H G AL +F ++P +T S +L
Sbjct: 328 EIYQWDSVLCNAMISSYAW-----------HGFGENALQLFVLTLRENLRPTEFTLSIVL 376
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ S L+ ++QG QIH+L +K+G SDV+V ++LV MY K G I+ A + F ++ R LI
Sbjct: 377 SAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLI 436
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW +MI G A + +AL++F+++L+ G P+++T G L AC+ G+V E L F M
Sbjct: 437 SWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSIFSSM 496
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+KEY + P ++HY C++DM R G ++EA D ++ M EP+ +IW + C +G++
Sbjct: 497 EKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRF 556
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
AE++++L+P+ Y +L + GRWE + V+ +E+ + + SWI IK+
Sbjct: 557 TERVAERVMELEPQSSLPYLVLAQAYEMRGRWESLVRVRRAMKEKGVRKVIGCSWIGIKN 616
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
V+ FK N LH +I+ +L L+++ + GY Q+
Sbjct: 617 HVFVFKENQLLHIGGKDIYFILRLLIQEIEDDGYASQQ 654
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 39/235 (16%)
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK- 434
F K + L +S+++ C L +L+ + +HA +K GF + +G +++Y
Sbjct: 25 FLKKAHGPLATSLSYYSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQ 84
Query: 435 ------------------------------KCGRIERASRVFVEMSTRTLISWTSMITGF 464
+ G +ERA VF EM R ++SW +MI+G+
Sbjct: 85 LGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGY 144
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA--GMVYEALGYFEMMQKEYKIK 522
+ L A + F +M AG+RP+ T+ L+ S+A G A M++ +
Sbjct: 145 VSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSACRGKQIHA----SMIRNGVDLS 200
Query: 523 PVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGF 577
V+ LI M+ + G ++ AF M+ E + W+ I C + G L
Sbjct: 201 NVVVGN-SLIGMYGKFGVVDYAFGVFITME-ELDITSWNSLIWSCGKSGYQNLAL 253
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 218/705 (30%), Positives = 355/705 (50%), Gaps = 57/705 (8%)
Query: 61 EALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEI-----IHAHI-VKTGSHQDFFVMTF 114
+ S+ T+ P++ + + +L ++ N+ N + +H+ I + H + +
Sbjct: 18 KPFSLTTQKPQL-SPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHPNPSLGIK 76
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
L+ Y CG + +FD + NVV + +I YV N + A+ VF M G YP
Sbjct: 77 LMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPD 136
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
N T L ACS ++ +G QIH VVK + + +GN L S+Y C L++A + +
Sbjct: 137 NYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD 196
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+ ++++SW +++ +NG L+ +M ++P+ GTM SL
Sbjct: 197 EMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPD----------AGTMGSL-- 244
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
L +N N LY+K +F + +L++WN MIA +
Sbjct: 245 ----------LPAVTNTSCDN---VLYVK--------DMFVKLKEKSLISWNVMIAVYVN 283
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
+ EA+ ++ ++ G++PD + SS+L C L A G +IH
Sbjct: 284 -----------NAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYV 332
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
+ ++++ AL++MY KCG ++ A VF +M R ++SWTSMI+ + A+
Sbjct: 333 ERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAV 392
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDM 534
LF+ M +G P+ + FV LAACS+AG+V E F +M EY I P ++HY C++D+
Sbjct: 393 ALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDL 451
Query: 535 FVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESY 594
R G I+EA+ ++M EPNE +W ++ CR + +M + AA+ L +L P+ Y
Sbjct: 452 LGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYY 511
Query: 595 AMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIF 654
+L +I+ AGRW+DV V+++ + + + S + I D VY+F D H QS EI+
Sbjct: 512 VLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIY 571
Query: 655 KVLDELVEKAKCFGYKQQ-----ESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVV 709
K L LV + K GY + E D+E HSEKLAI F +LNT S I +
Sbjct: 572 KALGVLVGRMKELGYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRIT 631
Query: 710 KSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+ +C DCH K+I+ + REII+RD+ R H F +G C+C D+
Sbjct: 632 KNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDY 676
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 186/396 (46%), Gaps = 50/396 (12%)
Query: 59 FQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+Q+AL V +G +Y +L+ C +L IH +VK G + ++
Sbjct: 118 YQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNG 177
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV++YGKC ++ A++V D +P ++VSW S+++GY QN +
Sbjct: 178 LVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGR------------------- 218
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST-CGSLNSAIKAF 233
AL C +E ++L D ++G+ L ++ +T C ++ F
Sbjct: 219 ---FNDALKLCREMEDLKL------------KPDAGTMGSLLPAVTNTSCDNVLYVKDMF 263
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+++EK+++SW +I N + + + +M G++P+ +++S+ CG + +
Sbjct: 264 VKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAV 323
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G ++H + NL + N+++ +Y KCG + EA+ +FD M ++V+W +MI+ +
Sbjct: 324 LGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYG 383
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
G +A+++F K+ SG PD F S+L CS +++G L
Sbjct: 384 M-----------SGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNL 432
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
+ G + +V++ + G+I+ A + +M
Sbjct: 433 MAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQM 468
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 192/587 (32%), Positives = 324/587 (55%), Gaps = 13/587 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
L C L + +H VK G + V LV++Y KC +EEA ++F +PR +
Sbjct: 254 FLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDD 313
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+V+W +ISG VQN + A+ +F DM ++G P +VTL + L A + L + GK+IH
Sbjct: 314 LVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHG 373
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
Y+V+ D + ++L +Y C + A F+ + +V+ +T+I N +
Sbjct: 374 YIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEA 433
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
++ F +L+ GI+PN + S C +M ++R+G ++H +K Y V +++M
Sbjct: 434 AVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMD 493
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSK 378
+Y KCG +D + +F MS + VTWN+MI+ AQ NG EAL +F +
Sbjct: 494 MYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQ------------NGEPEEALDLFRQ 541
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+K + T SSIL+ C+ L A+ G++IH + +K +D+ +AL++MY KCG
Sbjct: 542 MIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGN 601
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+E A RVF M + +SW S+I+ + H L +++ L M G + + VTF+ ++A
Sbjct: 602 LELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISA 661
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
C++AG V E L F M +EY I+P ++H C++D++ R G +++A FI M F+P+
Sbjct: 662 CAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAG 721
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
IW + CR H N+EL A+++L KL P +C Y ++ +I AGRW+ V+ ++ L +
Sbjct: 722 IWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMK 781
Query: 619 EEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
++K+ + +SW+ + + + F D HP S EI+ L L+ + K
Sbjct: 782 DKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLIIELK 828
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 248/502 (49%), Gaps = 15/502 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T YV ++ C +L ++H G +D +V + L+ +Y G ++ A+
Sbjct: 145 PDGHTLPYV--VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAR 202
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+VFD + + V W ++ GYV+ A+ +F M +G P TL L+ C++
Sbjct: 203 EVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEA 262
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G Q+H VKY E + +V N+L S+Y+ C L A + F + ++++W +I
Sbjct: 263 DLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMIS 322
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
C +NG LR F M G+QP+ TL S+ + + G ++H ++
Sbjct: 323 GCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHV 382
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
++ + ++++ +Y KC V AQ +FD +++V + MI+G+ +
Sbjct: 383 DVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYV-----------LNRMS 431
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
A+ +F L + G+KP+ +S L C+ + A+ G+++H LK + V +AL
Sbjct: 432 EAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESAL 491
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCGR++ + +F +MS + ++W SMI+ FA + +AL LF M++ GV+ N
Sbjct: 492 MDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNN 551
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT L+AC+ +Y ++ K I+ + LIDM+ + G +E A +
Sbjct: 552 VTISSILSACAGLPAIYYGKEIHGIIIKG-PIRADLFAESALIDMYGKCGNLELALRVFE 610
Query: 550 KMDFEPNEVIWSVFIAGCRRHG 571
M E NEV W+ I+ HG
Sbjct: 611 HMP-EKNEVSWNSIISAYGAHG 631
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 212/385 (55%), Gaps = 12/385 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + + SLL + IH +IV+ +H D F+++ LV++Y KC ++ A
Sbjct: 344 GLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMA 403
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
Q VFD I+VV +++ISGYV N E A+ +F +L G P V + + L AC+S+
Sbjct: 404 QNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASM 463
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
++R+G+++H YV+K E V ++L +YS CG L+ + F+++ K+ ++W ++I
Sbjct: 464 AAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMI 523
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+ +NGE + L F +M+ EG++ N T++SI S C + ++ G ++H + IK
Sbjct: 524 SSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIR 583
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
++L ++++ +Y KCG ++ A ++F+ M N V+WN++I+ + AH
Sbjct: 584 ADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYG-----------AHGL 632
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI-HALTLKTGFLSDVVVGT 427
E++ + + G K D TF ++++ C+ +++G ++ +T + V +
Sbjct: 633 VKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLS 692
Query: 428 ALVNMYKKCGRIERASRVFVEMSTR 452
+V++Y + G++++A + +M +
Sbjct: 693 CMVDLYSRAGKLDKAMQFIADMPFK 717
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 154/336 (45%), Gaps = 21/336 (6%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS-----LCSLYSTCGSLN 227
P L L C + + LG +IHA V D G + L +Y
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 228 SAIKAFN---RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSI 282
A+ F+ R + W +I G + F+ KM + +P+ TL +
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
C + +L +G VH LG ++ V ++++ +Y GL+D A+++FDGM +
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDC 213
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
V WN M+ G+ + D+A A+ +F + +SG P+ T + L++C+
Sbjct: 214 VLWNVMMDGYVKAGDVA-----------SAVGLFRVMRASGCDPNFATLACFLSVCAAEA 262
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMIT 462
L G Q+H L +K G +V V LV+MY KC +E A R+F M L++W MI+
Sbjct: 263 DLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMIS 322
Query: 463 GFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
G + L AL+LF DM +G++P+ VT L A
Sbjct: 323 GCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPA 358
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G K S L C + ++ + +H +++K +V + L+++Y KCG
Sbjct: 441 LLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGR 500
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ + +F + + V+W S+IS + QN +PE A+ +F M+ G NVT+ + L+A
Sbjct: 501 LDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSA 560
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ L +I GK+IH ++K D ++L +Y CG+L A++ F + EKN +SW
Sbjct: 561 CAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSW 620
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG 287
++I A G +G + + M EG + + T ++ S C
Sbjct: 621 NSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACA 663
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 130/311 (41%), Gaps = 29/311 (9%)
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-----ASNLRVRNSIMYLYLKCGLVD 328
P + L ++ C L +G ++H+ + G ++ ++ +Y+
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 329 EAQKLFDGMSHVNL---VTWNAMI-----AGHAQMMDLAKDDLSAHNGGTEALSIFSKLN 380
+A +F + + WN +I AGH ++ L + AH
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAH-------------- 139
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
S +PD +T ++ C+ L AL G +H T G D+ VG+AL+ MY G ++
Sbjct: 140 PSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLD 199
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF M R + W M+ G+ A+ LF M +G PN T L+ C+
Sbjct: 200 GAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCA 259
Query: 501 NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIW 560
+ + + K Y ++P + L+ M+ + C+EEA+ M + + V W
Sbjct: 260 AEADLLSGVQLHTLAVK-YGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD-DLVTW 317
Query: 561 SVFIAGCRRHG 571
+ I+GC ++G
Sbjct: 318 NGMISGCVQNG 328
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 207/609 (33%), Positives = 333/609 (54%), Gaps = 40/609 (6%)
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA-----FN 234
T L C +L I KQ+HA ++ + V L L T LN + FN
Sbjct: 51 TTLDGCKNLTQI---KQVHARILLNGLDQSCYV---LAKLIRTLTKLNIPVDPYPLSIFN 104
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ N + +I + F+S M EG+ P FT T++ CG + + +
Sbjct: 105 QVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGL 164
Query: 295 GAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q+H I +G + +L V NS++ +Y+KCG ++ +K+FD M + ++++W +I+ +
Sbjct: 165 GRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYV 224
Query: 354 QMMDL-----------AKDDLS--------AHNGGT-EALSIFSKLNSSGMKPDLYTFSS 393
+ ++ KD ++ A N EA+ F K+ G++ D T
Sbjct: 225 KSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIG 284
Query: 394 ILTICSRLVALEQGEQIHALTLKTGF--LSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
+++ C++L A + + I + K+ F VVVG+AL++MY KCG + A RVF M
Sbjct: 285 VISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKE 344
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
R + S++SMI GFA H H A++LF++M+ ++PN+VTF+G L ACS+AGMV +
Sbjct: 345 RNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQI 404
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FE+M+K Y IKP DHY C++D+ R G ++EA + +K M EP+ +W + CR H
Sbjct: 405 FELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGACRIHK 464
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
+ ++ AA L +L+P +Y +L +I+ S GRW DV+ V+ L R L + +SWI
Sbjct: 465 SPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSWI 524
Query: 632 RI-KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ---ESFELTDEESASVY- 686
K V+ F D HP+S EI + L++L+++ + GY+ S+++ DE+ +
Sbjct: 525 ESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQPHLSSVSYDVNDEDKRRILM 584
Query: 687 -HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFV 745
HSEKLA+AFGL++T S I +VK+ +C DCH+ I + +T REIIVRD R H F
Sbjct: 585 THSEKLALAFGLISTIPGSKIRIVKNLRICEDCHSVICGASQITGREIIVRDIMRFHHFH 644
Query: 746 NGHCTCRDF 754
+G C+C +F
Sbjct: 645 DGICSCGNF 653
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 182/412 (44%), Gaps = 51/412 (12%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK--VF 132
S V+ L C K+L+ + +HA I+ G Q +V+ L+ K + +F
Sbjct: 47 SQIVTTLDGC---KNLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIF 103
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIR 192
+ + N + +LI GY+ + + + + M + G P + T AC + +
Sbjct: 104 NQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVG 163
Query: 193 LGKQIHAYVVKYQT-EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA- 250
LG+QIH + +D VGNS+ +Y CG L K F+ + ++V+SWT +I A
Sbjct: 164 LGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAY 223
Query: 251 --------CGE----------------------NGEAVQGLRFFSKMLSEGIQPNEFTLT 280
GE N + + + FF KM G++ +E TL
Sbjct: 224 VKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLI 283
Query: 281 SISSVCGTMLSLRVGAQVHSLGIK--LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ S C + + + + + K G ++ V ++++ +Y KCG V +A ++F GM
Sbjct: 284 GVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMK 343
Query: 339 HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTIC 398
N+ ++++MI G A H +A+ +F ++ + +KP+ TF +LT C
Sbjct: 344 ERNVYSYSSMILGFAM-----------HGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTAC 392
Query: 399 SRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGRIERASRVFVEM 449
S +EQG QI L K G T +V++ + GR++ A + M
Sbjct: 393 SHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTM 444
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 165/392 (42%), Gaps = 62/392 (15%)
Query: 106 HQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLD 165
++D T L++ Y K GNME A ++FD LP ++V+WT ++SG+ QN++P AI F
Sbjct: 210 NRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEK 269
Query: 166 MLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK--YQTEDDTSVGNSLCSLYSTC 223
M E G +TL ++AC+ L + + I K + + VG++L +YS C
Sbjct: 270 MQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKC 329
Query: 224 GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
GS+ A + F ++E+NV S++++I +G ++ F +M+ I+PN T +
Sbjct: 330 GSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVL 389
Query: 284 SVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+ C + G Q+ L K G + ++ L + G + EA +L M
Sbjct: 390 TACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMP---- 445
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLV 402
+ H G AL +++ S PD+ ++
Sbjct: 446 --------------------IEPHGGVWGALLGACRIHKS---PDIAAIAA--------- 473
Query: 403 ALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISW 457
H L+ + + ++ L N+Y CGR S V M TR L SW
Sbjct: 474 -------NHLFELEPYCIGNYIL---LANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSW 523
Query: 458 T--------SMITGFANHSLSHQALQLFEDML 481
+G H S + Q ED+L
Sbjct: 524 IESEKGMVHEFFSGDMTHPRSGEIKQALEDLL 555
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 50 NSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIH--AHIVKTGSHQ 107
N++P ++ F E + G + + + ++ C + A+ I A + G
Sbjct: 257 NAKPREAIMFFEKMQEF--GVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKH 314
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
V + L+++Y KCG++ +A +VF + NV S++S+I G+ + + A+ +F +M+
Sbjct: 315 SVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMV 374
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSL 226
+ P VT LTACS + G QI + K Y + + L G L
Sbjct: 375 KTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRL 434
Query: 227 NSAIKAFNRIR-EKNVMSWTTVIGAC 251
A + + E + W ++GAC
Sbjct: 435 QEAHELVKTMPIEPHGGVWGALLGAC 460
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 330/603 (54%), Gaps = 24/603 (3%)
Query: 159 AIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCS 218
+I ++ ML +G+ P + L +C+SL G+Q+H +V K E + V +L S
Sbjct: 37 SISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALIS 96
Query: 219 LYSTCGSLNSAIKAFNRIREKNVMS--WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
+Y CG + A K F + + +S + +I N + F +M G+ +
Sbjct: 97 MYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDS 156
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
T+ + +C L +G +H +K G S + V NS + +Y+KCG V+ ++LFD
Sbjct: 157 VTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 337 MSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSIL 395
M L+TWNA+I+G++Q NG + L ++ ++ SSG+ PD +T S+L
Sbjct: 217 MPVKGLITWNAVISGYSQ------------NGLAYDVLELYEQMKSSGVCPDPFTLVSVL 264
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ C+ L A + G ++ L GF+ +V V A ++MY +CG + +A VF M ++L+
Sbjct: 265 SSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV 324
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SWT+MI + H + L LF+DM+ G+RP+ FV L+ACS++G+ + L F M
Sbjct: 325 SWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAM 384
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
++EYK++P +HY CL+D+ R G ++EA +FI+ M EP+ +W + C+ H N+++
Sbjct: 385 KREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDM 444
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
A ++++ +P + Y ++ +I+ + E + ++ + RE + +S++ K
Sbjct: 445 AELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKG 504
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDEL----VEKAKCFGYKQQESFELTDEESASVYHSEKL 691
+V+ F D H Q+ E+ ++LDEL +E A + E T E HSE+L
Sbjct: 505 RVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMDCDRGEEVSSTTRE-----HSERL 559
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
AIAFG+LN+ + ILV+K+ +C DCH F+K ++ + R+ +VRD+ R H F +G C+C
Sbjct: 560 AIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSC 619
Query: 752 RDF 754
+D+
Sbjct: 620 KDY 622
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/388 (28%), Positives = 199/388 (51%), Gaps = 15/388 (3%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+L G S+ +L+ C + + + +H H+ K G + FV+T L+++Y KCG
Sbjct: 43 SMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCG 102
Query: 124 NMEEAQKVFDNLPRINVVS--WTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
+ +A+KVF+ P+ + +S + +LISGY NS+ A ++F M E G +VT+
Sbjct: 103 LVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ C+ E + LG+ +H VK + + +V NS ++Y CGS+ + + F+ + K +
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL 222
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
++W VI +NG A L + +M S G+ P+ FTL S+ S C + + ++G +V L
Sbjct: 223 ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKL 282
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
G+ N+ V N+ + +Y +CG + +A+ +FD M +LV+W AMI +
Sbjct: 283 VESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGM------- 335
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFL 420
H G L +F + G++PD F +L+ CS ++G E A+ +
Sbjct: 336 ----HGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 391
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVE 448
+ LV++ + GR++ A F+E
Sbjct: 392 PGPEHYSCLVDLLGRAGRLDEAME-FIE 418
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+E++S++ + SG PD ++F IL C+ L G+Q+H K G ++ V TAL
Sbjct: 35 SESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTAL 94
Query: 430 VNMYKKCGRIERASRVFVE--MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++MY KCG + A +VF E S++ + + ++I+G+ +S A +F M GV
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL----IDMFVRLGCIEE 543
+ VT +G + C+ V E L + + +K +D + + I M+++ G +E
Sbjct: 155 DSVTMLGLVPLCT----VPEYLWLGRSLHGQC-VKGGLDSEVAVLNSFITMYMKCGSVEA 209
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+M + + W+ I+G ++G
Sbjct: 210 GRRLFDEMPVK-GLITWNAVISGYSQNG 236
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 203/631 (32%), Positives = 328/631 (51%), Gaps = 23/631 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P T YV ++ C S++ ++H I G D FV + L+ Y + G + +A+
Sbjct: 145 PDKYTFPYV--IKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDAR 202
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P + V W +++GYV+N + A VF++M P +VT L+ C+S
Sbjct: 203 YLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNS--LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
I G Q+H VV E D+ V N+ L +Y C + A K F++ +++ T +
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAM 322
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I NG L F +L E ++ N TL S+ C + +L +G ++H +K G+
Sbjct: 323 ISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGH 382
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V ++IM +Y KCG +D A + F G+S + V WN+MI +Q N
Sbjct: 383 GGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQ------------N 430
Query: 368 GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G E A+ +F ++ +G K D + S+ L+ C+ L AL G++IHA ++ F SD+
Sbjct: 431 GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAE 490
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+AL++MY KCG ++ A RVF M + +SW S+I + NH +L LF ML G++
Sbjct: 491 SALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQ 550
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ VTF+ ++AC +AG V E + YF M +E I M+HY C++D+F R G + EAF
Sbjct: 551 PDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFG 610
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
I M F P+ +W + CR HGN+EL A+ L L P++ Y +L ++ +AG+
Sbjct: 611 MINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQ 670
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKC 666
WE V +++L +E + + SWI + + + F D HPQS++I+ +L L + +
Sbjct: 671 WESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRK 730
Query: 667 FGYKQQESFELTDEESA------SVYHSEKL 691
GY Q + + S YHS K+
Sbjct: 731 EGYVPQLYLPMHPQTMGLHNGRISYYHSSKI 761
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/500 (29%), Positives = 245/500 (49%), Gaps = 17/500 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
VS+LQ C + LS HA ++ G + + T L+ +Y CG +A+ +F L
Sbjct: 50 VSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRL 109
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
W +I G+ Q + A+ + ML G P T + AC L S+ LG+ +
Sbjct: 110 WCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVV 169
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H + E D VG+SL YS G ++ A F+R+ K+ + W ++ +NG+
Sbjct: 170 HDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDW 229
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS- 316
F +M PN T + SVC + + + G+Q+H L + G + V N+
Sbjct: 230 DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTF 289
Query: 317 -IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y KC V+ A+K+FD + V++V AMI+G+ L+ N AL I
Sbjct: 290 ALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYV---------LNGMN--NNALEI 338
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F L M+ + T +S+L C+ L AL G+++H LK G VG+A+++MY K
Sbjct: 339 FRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAK 398
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CGR++ A + F+ +S + + W SMIT + + +A+ LF M +AG + + V+ A
Sbjct: 399 CGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAA 458
Query: 496 LAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L+AC+N + Y + MM+ ++ + LIDM+ + G ++ A M+ E
Sbjct: 459 LSACANLPALHYGKEIHAFMMRGAFRSDLFAES--ALIDMYSKCGNLDLACRVFDTME-E 515
Query: 555 PNEVIWSVFIAGCRRHGNME 574
NEV W+ IA HG ++
Sbjct: 516 KNEVSWNSIIAAYGNHGRLK 535
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 163/319 (51%), Gaps = 10/319 (3%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L E + + + S+L C +L+ + +H HI+K G +V + ++++Y KCG
Sbjct: 342 LLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGR 401
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A + F + + V W S+I+ QN +PE AI +F M AG V++ AL+A
Sbjct: 402 LDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSA 461
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C++L ++ GK+IHA++++ D ++L +YS CG+L+ A + F+ + EKN +SW
Sbjct: 462 CANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSW 521
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ-VHSLGI 303
++I A G +G L F ML +GIQP+ T +I S CG + G +
Sbjct: 522 NSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTE 581
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIA-----GHAQMMD 357
+LG + + ++ L+ + G ++EA + + M + W ++ G+ ++ +
Sbjct: 582 ELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAE 641
Query: 358 LAKD---DLSAHNGGTEAL 373
+A DL N G L
Sbjct: 642 VASRNLFDLDPQNSGYYVL 660
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 191/402 (47%), Gaps = 21/402 (5%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
L + L C+ + G+Q HA ++ + +G L +Y CG+ A F ++R
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
W +I G+ L F+ KML G P+++T + CG + S+ +G
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
VH +G+ ++ V +S++ Y + G + +A+ LFD M + V WN M+ G+ + D
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 358 LAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT 417
A +F ++ + P+ TF+ +L++C+ + + G Q+H L + +
Sbjct: 229 W-----------DNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS 277
Query: 418 GFLSDVVVGT--ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
G D V AL+++Y KC +E A ++F + + ++ T+MI+G+ + +++ AL+
Sbjct: 278 GLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALE 337
Query: 476 LFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLID 533
+F +L +R N VT L AC AG+ LG E+ K Y+ ++D
Sbjct: 338 IFRWLLQERMRANSVTLASVLPAC--AGLAALTLGK-ELHGHILKNGHGGSCYVGSAIMD 394
Query: 534 MFVRLGCIEEAFD-FIKKMDFEPNEVIWSVFIAGCRRHGNME 574
M+ + G ++ A FI D + V W+ I C ++G E
Sbjct: 395 MYAKCGRLDLAHQTFIGISD--KDAVCWNSMITSCSQNGKPE 434
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 315/546 (57%), Gaps = 21/546 (3%)
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N L ++Y LN A + F+++ ++NV+SWTT+I A + + L ML + ++
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
PN +T +S+ C M +R+ +H IK G S++ VR++++ ++ K G ++A +
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD M + + WN++I G AQ ++ D+ AL +F ++ +G + T +S
Sbjct: 217 FDEMVTGDAIVWNSIIGGFAQN---SRSDV--------ALELFKRMKRAGFIAEQATLTS 265
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L C+ L LE G Q H +K + D+++ ALV+MY KCG +E A RVF +M R
Sbjct: 266 VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD 323
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+I+W++MI+G A + S +AL+LFE M +G +PN +T VG L ACS+AG++ + YF
Sbjct: 324 VITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFR 383
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M+K Y I PV +HY C+ID+ + G +++A + +M+ EP+ V W + CR NM
Sbjct: 384 SMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNM 443
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
L YAA++++ L P+D +Y +L +I+ ++ +W+ V ++ R+ + + SWI +
Sbjct: 444 VLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV-----YHS 688
++++F D HPQ E+ K L++L+ + GY + +F L D E + +HS
Sbjct: 504 NKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHS 563
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
EKLA+AFGL+ PI I + K+ +C DCH F K+ + L R I++RD R H F +G
Sbjct: 564 EKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGK 623
Query: 749 CTCRDF 754
C+C D+
Sbjct: 624 CSCGDY 629
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 205/402 (50%), Gaps = 22/402 (5%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ + G +++Y L++ C++ +++ +I H+ G F++ L+N+Y K
Sbjct: 51 SLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFN 110
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
+ +A ++FD +P+ NV+SWT++IS Y + + A+ + + ML P T + L
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
+C+ + +R+ +H ++K E D V ++L +++ G A+ F+ + + +
Sbjct: 171 SCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W ++IG +N + L F +M G + TLTS+ C + L +G Q H +
Sbjct: 228 WNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV 287
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
K Y +L + N+++ +Y KCG +++A ++F+ M +++TW+ MI+G AQ
Sbjct: 288 K--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQ--------- 336
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
NG EAL +F ++ SSG KP+ T +L CS LE G + ++K + D
Sbjct: 337 ---NGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGID 392
Query: 423 VVVG--TALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMI 461
V ++++ K G+++ A ++ EM ++W +++
Sbjct: 393 PVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 22/241 (9%)
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALV 430
A+ L S G+ D T+S ++ C A+ +G I G + + L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
NMY K + A ++F +M R +ISWT+MI+ ++ + +AL+L ML VRPN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVY 163
Query: 491 TFVGALAAC---SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
T+ L +C S+ M++ + E ++ + ++ LID+F +LG E+A
Sbjct: 164 TYSSVLRSCNGMSDVRMLHCGI-IKEGLESDVFVRSA------LIDVFAKLGEPEDALSV 216
Query: 548 IKKMDFEPNEVIWSVFIAG----CRRHGNMEL-------GFYAAEQLLKLKPKDCESYAM 596
+M + ++W+ I G R +EL GF A + L + C A+
Sbjct: 217 FDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 597 L 597
L
Sbjct: 276 L 276
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/599 (31%), Positives = 328/599 (54%), Gaps = 21/599 (3%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF-DNLP 136
++ LQ + K+LS + IH++++ G +T L+N+Y KC M A +F D
Sbjct: 41 IASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTH 100
Query: 137 RINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
INV ++ ++ISG++ N PE + M G P T A+ AC + I K+
Sbjct: 101 EINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KK 157
Query: 197 IHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGE 256
IH + K+ E D +G++L + Y G + A AF + ++V+ W ++ + G+
Sbjct: 158 IHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 217
Query: 257 AVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L F +M E + P+ FT+T + SV M L G +H +K+GY S + V NS
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ +Y KC +++A ++F+ M ++ +WN++++ H Q D H+G L +
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD--------HDG---TLRLL 326
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGF------LSDVVVGTALV 430
++ +G++PDL T +++L CS L AL G +IH + +G + DV++ A++
Sbjct: 327 DRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVI 386
Query: 431 NMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQV 490
+MY KCG + A VF MS + + SW MI G+ H ++AL++F M ++P++V
Sbjct: 387 DMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEV 446
Query: 491 TFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKK 550
TFVG L+ACS+AG V + + M+ +Y + P ++HY C+IDM R G ++EA++
Sbjct: 447 TFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALT 506
Query: 551 MDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDV 610
M E N V+W +A CR H + L AA+++ +L+P+ C SY ++ +++ + GR+E+V
Sbjct: 507 MPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEV 566
Query: 611 AVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
V++ R++ + +T SWI +K+ V+ F D HP++ I+ L+ L + + GY
Sbjct: 567 LEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAHSIYAGLNSLTARLREHGY 625
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,962,645,309
Number of Sequences: 23463169
Number of extensions: 428823787
Number of successful extensions: 1226427
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8126
Number of HSP's successfully gapped in prelim test: 3381
Number of HSP's that attempted gapping in prelim test: 1035346
Number of HSP's gapped (non-prelim): 59034
length of query: 758
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 607
effective length of database: 8,816,256,848
effective search space: 5351467906736
effective search space used: 5351467906736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)