BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004369
(758 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/694 (35%), Positives = 401/694 (57%), Gaps = 29/694 (4%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGN-MEEAQKVFDN 134
Y ++++ C N + + ++KTG + D V L++++ K N E A KVFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ +NVV+WT +I+ +Q P AI FLDM+ +G TL + +AC+ LE++ LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTC---GSLNSAIKAFNRIREKNVMSWTTVIGAC 251
KQ+H++ ++ DD V SL +Y+ C GS++ K F+R+ + +VMSWT +I
Sbjct: 289 KQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 252 GENGE-AVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+N A + + FS+M+++G ++PN FT +S CG + RVG QV K G AS
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V NS++ +++K +++AQ+ F+ +S NLV++N + G + ++
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF----------- 455
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
+A + S++ + +TF+S+L+ + + ++ +GEQIH+ +K G + V AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++MY KCG I+ ASRVF M R +ISWTSMITGFA H + + L+ F M+ GV+PN+
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIK 549
VT+V L+ACS+ G+V E +F M +++KIKP M+HY C++D+ R G + +AF+FI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 550 KMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
M F+ + ++W F+ CR H N ELG AA ++L+L P + +Y L +I+ AG+WE+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 610 VAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY 669
++ +E L + SWI + DK++ F D HP + +I+ LD L+ + K GY
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 670 KQQESFELTDEESASVY---------HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
L E + HSEK+A+AFGL++T P+ V K+ +C DCHN
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 815
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+K I++++ REI++RD R H F +G C+C D+
Sbjct: 816 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDY 849
Score = 226 bits (575), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 167/639 (26%), Positives = 315/639 (49%), Gaps = 68/639 (10%)
Query: 21 PSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLT-EGPKVQTS-SYV 78
PS + +K + + +LI + N+ +R G AL ++ +G + S ++
Sbjct: 9 PSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLR--GAVSALDLMARDGIRPMDSVTFS 66
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
SLL+ C+ + +++HA +++ D + L+++Y K G+ +A+ VF+ + R
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRF 126
Query: 139 ---NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+VVSW+++++ Y N + AI VF++ LE G P + + ACS+ + + +G+
Sbjct: 127 GKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGR 186
Query: 196 QIHAYVVKY-QTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
+++K E D VG SL ++ S +A K F+++ E NV++WT +I C +
Sbjct: 187 VTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQ 246
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
G + +RFF M+ G + ++FTL+S+ S C + +L +G Q+HS I+ G + V
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--V 304
Query: 314 RNSIMYLYLKC---GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
S++ +Y KC G VD+ +K+FD M ++++W A+I G+ + +LA T
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLA----------T 354
Query: 371 EALSIFSKLNSSG-MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
EA+++FS++ + G ++P+ +TFSS C L G+Q+ K G S+ V ++
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSV 414
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
++M+ K R+E A R F +S + L+S+ + + G + QA +L ++ + +
Sbjct: 415 ISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSA 474
Query: 490 VTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA--- 544
TF L+ +N G + + ++ + K+ + +C LI M+ + G I+ A
Sbjct: 475 FTFASLLSGVANVGSIRKGE---QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 545 FDFIKKMD-------------------------------FEPNEVIWSVFIAGCRRHGNM 573
F+F++ + +PNEV + ++ C G +
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 574 ELG---FYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
G F + + K+KPK E YA ++D+ AG D
Sbjct: 592 SEGWRHFNSMYEDHKIKPK-MEHYACMVDLLCRAGLLTD 629
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 55 RSLGFQEALSVLTEGPK----VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+L F++A +L+E + V ++ SLL N S+ E IH+ +VK G +
Sbjct: 451 RNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
V L+++Y KCG+++ A +VF+ + NV+SWTS+I+G+ ++ + F M+E G
Sbjct: 511 VCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEG 570
Query: 171 NYPTNVTLGTALTACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
P VT L+ACS + + G + ++ ++ + + L G L A
Sbjct: 571 VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDA 630
Query: 230 IKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE----FTLTSISS 284
+ N + + +V+ W T +GAC + G K+L + PNE L++I +
Sbjct: 631 FEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILE--LDPNEPAAYIQLSNIYA 688
Query: 285 VCGTM---LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV 340
G +R + +L +K G S + V + I Y+ A +++D + +
Sbjct: 689 CAGKWEESTEMRRKMKERNL-VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRL 746
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/690 (36%), Positives = 388/690 (56%), Gaps = 19/690 (2%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V +Y LL+ C + L + IH +VK+G D F MT L N+Y KC + EA+
Sbjct: 133 PVVYNFTY--LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
KVFD +P ++VSW ++++GY QN +A+ + M E P+ +T+ + L A S+L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
I +GK+IH Y ++ + ++ +L +Y+ CGSL +A + F+ + E+NV+SW ++I
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
A +N + + F KML EG++P + ++ C + L G +H L ++LG
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR 370
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
N+ V NS++ +Y KC VD A +F + LV+WNAMI G AQ NG
Sbjct: 371 NVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ------------NGR 418
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
+AL+ FS++ S +KPD +T+ S++T + L + IH + +++ +V V TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
LV+MY KCG I A +F MS R + +W +MI G+ H AL+LFE+M ++PN
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+ ++ACS++G+V L F MM++ Y I+ MDHY ++D+ R G + EA+DFI
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+M +P ++ + C+ H N+ AAE+L +L P D + +L +I+ +A WE
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
V V+ + L +T S + IK++V+SF HP S +I+ L++L+ K G
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718
Query: 669 YKQQESFELTDE----ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKI 724
Y + L E E HSEKLAI+FGLLNT + I V K+ +C DCHN K
Sbjct: 719 YVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKY 778
Query: 725 ITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I+ +T REI+VRD +R H F NG C+C D+
Sbjct: 779 ISLVTGREIVVRDMQRFHHFKNGACSCGDY 808
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/512 (28%), Positives = 259/512 (50%), Gaps = 20/512 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRI 138
LL+ C + K L I + K G +Q+ F T LV+++ + G+++EA +VF+ + ++
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NV+ + +++ G+ + S + A+ F+ M P L C +R+GK+IH
Sbjct: 100 NVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+VK D L ++Y+ C +N A K F+R+ E++++SW T++ +NG A
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMAR 218
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
L M E ++P+ T+ S+ + + VG ++H ++ G+ S + + +++
Sbjct: 219 MALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALV 278
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG ++ A++LFDGM N+V+WN+MI + Q + EA+ IF K
Sbjct: 279 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ-----------NENPKEAMLIFQK 327
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ G+KP + L C+ L LE+G IH L+++ G +V V +L++MY KC
Sbjct: 328 MLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKE 387
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
++ A+ +F ++ +RTL+SW +MI GFA + AL F M V+P+ T+V + A
Sbjct: 388 VDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 499 CSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEV 558
+ + + A ++ + K V L+DM+ + G I A I M E +
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFV-TTALVDMYAKCGAIMIA-RLIFDMMSERHVT 505
Query: 559 IWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
W+ I G HG + E++ K +KP
Sbjct: 506 TWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 232/454 (51%), Gaps = 25/454 (5%)
Query: 64 SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG 123
S+ E K + VS+L + +S + IH + +++G + T LV++Y KCG
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 124 NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALT 183
++E A+++FD + NVVSW S+I YVQN P+ A+ +F ML+ G PT+V++ AL
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMS 243
AC+ L + G+ IH V+ + + SV NSL S+Y C +++A F +++ + ++S
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 244 WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
W +I +NG + L +FS+M S ++P+ FT S+ + + +H + +
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ N+ V +++ +Y KCG + A+ +FD MS ++ TWNAMI G+
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG---------- 515
Query: 364 SAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
H G AL +F ++ +KP+ TF S+++ CS +E G + + +K + ++
Sbjct: 516 -THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYM-MKENYSIEL 573
Query: 424 VVG--TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITG----FANHSLSHQALQ-L 476
+ A+V++ + GR+ A ++M + ++ + G N + + +A + L
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERL 633
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALG 510
FE + P+ + LA A ++E +G
Sbjct: 634 FE------LNPDDGGYHVLLANIYRAASMWEKVG 661
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 212/429 (49%), Gaps = 24/429 (5%)
Query: 167 LEAGNY-PTNVTLGTA---LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYST 222
L NY P NV A L CSSL+ +R QI V K + L SL+
Sbjct: 25 LSERNYIPANVYEHPAALLLERCSSLKELR---QILPLVFKNGLYQEHFFQTKLVSLFCR 81
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
GS++ A + F I K + + T++ + + + L+FF +M + ++P + T +
Sbjct: 82 YGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYL 141
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
VCG LRVG ++H L +K G++ +L + +Y KC V+EA+K+FD M +L
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDL 201
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V+WN ++AG++Q NG AL + + +KP T S+L S L
Sbjct: 202 VSWNTIVAGYSQ------------NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
+ G++IH +++GF S V + TALV+MY KCG +E A ++F M R ++SW SMI
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMI 309
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
+ + +A+ +F+ ML GV+P V+ +GAL AC++ G + E + + E +
Sbjct: 310 DAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL-ERGRFIHKLSVELGL 368
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM--ELGFYA 579
+ LI M+ + ++ A K+ V W+ I G ++G L +++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQ-SRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 580 AEQLLKLKP 588
+ +KP
Sbjct: 428 QMRSRTVKP 436
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 251/768 (32%), Positives = 423/768 (55%), Gaps = 92/768 (11%)
Query: 79 SLLQECVNRKSLS-NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-------------- 123
+LLQ+ VN+ + A+++H ++K+G ++M L+NVY K G
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 124 -----------------NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
+M+ + FD LP+ + VSWT++I GY Q AI V DM
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS- 225
++ G PT TL L + ++ + GK++H+++VK + SV NSL ++Y+ CG
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDP 197
Query: 226 ------------------------------LNSAIKAFNRIREKNVMSWTTVIGACGENG 255
++ A+ F ++ E+++++W ++I + G
Sbjct: 198 MMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRG 257
Query: 256 EAVQGLRFFSKMLSEGI-QPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
++ L FSKML + + P+ FTL S+ S C + L +G Q+HS + G+ + V
Sbjct: 258 YDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVL 317
Query: 315 NSIMYLYLKCGLVDEAQKLFD--GMSHVNLVTWNAMIAGHAQMMDL--AKD--------D 362
N+++ +Y +CG V+ A++L + G + + + A++ G+ ++ D+ AK+ D
Sbjct: 318 NALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD 377
Query: 363 LSA----------HNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
+ A H EA+++F + G +P+ YT +++L++ S L +L G+QIH
Sbjct: 378 VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF-VEMSTRTLISWTSMITGFANHSLSH 471
+K+G + V V AL+ MY K G I ASR F + R +SWTSMI A H +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+AL+LFE ML+ G+RP+ +T+VG +AC++AG+V + YF+MM+ KI P + HY C+
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDC 591
+D+F R G ++EA +FI+KM EP+ V W ++ CR H N++LG AAE+LL L+P++
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENS 617
Query: 592 ESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSA 651
+Y+ L +++ + G+WE+ A ++ ++ ++ + +SWI +K KV+ F DG HP+
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKN 677
Query: 652 EIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPI 706
EI+ + ++ ++ K GY + L D +E +HSEKLAIAFGL++TP + +
Sbjct: 678 EIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTL 737
Query: 707 LVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++K+ +C DCH IK I+ L REIIVRD+ R H F +G C+CRD+
Sbjct: 738 RIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDY 785
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 144/514 (28%), Positives = 220/514 (42%), Gaps = 102/514 (19%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQ--------IHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
P ++L T L C++L + K +H V+K + N+L ++YS G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK------------------ 266
A K F+ + + SW TV+ A + G+ FF +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 267 -------------MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
M+ EGI+P +FTLT++ + + G +VHS +KLG N+ V
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSV 183
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM--MDL--------AKDDL 363
NS++ +Y KCG A+ +FD M ++ +WNAMIA H Q+ MDL A+ D+
Sbjct: 184 SNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDI 243
Query: 364 SAHNG----------GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHA 412
N AL IFSK L S + PD +T +S+L+ C+ L L G+QIH+
Sbjct: 244 VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHS 303
Query: 413 LTLKTGFLSDVVVGTALVNMYKKCGRIERASR---------------------------- 444
+ TGF +V AL++MY +CG +E A R
Sbjct: 304 HIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDM 363
Query: 445 -----VFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC 499
+FV + R +++WT+MI G+ H +A+ LF M+ G RPN T L+
Sbjct: 364 NQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVA 423
Query: 500 SNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI---EEAFDFIKKMDFEPN 556
S+ + K +I V LI M+ + G I AFD I+ E +
Sbjct: 424 SSLASLSHGKQIHGSAVKSGEIYSV-SVSNALITMYAKAGNITSASRAFDLIR---CERD 479
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKP 588
V W+ I +HG+ E E +L L+P
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 228/521 (43%), Gaps = 95/521 (18%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
++ EG + + ++L + + + +H+ IVK G + V L+N+Y KCG+
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 125 -------------------------------MEEAQKVFDNLPRINVVSWTSLISGYVQN 153
M+ A F+ + ++V+W S+ISG+ Q
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 154 SQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSV 212
A+ +F ML ++ P TL + L+AC++LE + +GKQIH+++V + V
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 213 GNSLCSLYSTC---------------------------------GSLNSAIKAFNRIREK 239
N+L S+YS C G +N A F ++++
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVH 299
+V++WT +I ++G + + F M+ G +PN +TL ++ SV ++ SL G Q+H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 300 SLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDL 358
+K G ++ V N+++ +Y K G + A + FD + + V+W +MI AQ
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ---- 492
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG 418
H EAL +F + G++PD T+ + + C+ + QG Q +
Sbjct: 493 -------HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDV- 544
Query: 419 FLSDVVVGT-----ALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANHSLSHQ 472
D ++ T +V+++ + G ++ A +M +++W S+++ H
Sbjct: 545 ---DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDL 601
Query: 473 ALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
E +LL + P GA +A +N +Y A G +E
Sbjct: 602 GKVAAERLLL--LEPEN---SGAYSALAN---LYSACGKWE 634
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 255/716 (35%), Positives = 399/716 (55%), Gaps = 44/716 (6%)
Query: 48 NGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ 107
N ++P S F AL VL E E V + L +H +VK G +
Sbjct: 187 NEGTQP-NSFTFAAALGVLAE--------------EGVGGRGLQ----VHTVVVKNGLDK 227
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
V L+N+Y KCGN+ +A+ +FD +VV+W S+ISGY N A+ +F M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 168 EAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLN 227
+ + + + C++L+ +R +Q+H VVKY D ++ +L YS C ++
Sbjct: 288 LNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 228 SAIKAFNRIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
A++ F I NV+SWT +I +N + + FS+M +G++PNEFT SV
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTY----SVI 403
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWN 346
T L + ++VH+ +K Y + V +++ Y+K G V+EA K+F G+ ++V W+
Sbjct: 404 LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWS 463
Query: 347 AMIAGHAQMMDLAKDDLSAHNGGTEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVA-L 404
AM+AG+AQ G TEA + +F +L G+KP+ +TFSSIL +C+ A +
Sbjct: 464 AMLAGYAQ------------TGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
QG+Q H +K+ S + V +AL+ MY K G IE A VF + L+SW SMI+G+
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
A H + +AL +F++M V+ + VTF+G AAC++AG+V E YF++M ++ KI P
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
+H C++D++ R G +E+A I+ M IW +A CR H ELG AAE+++
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
+KP+D +Y +L +++ +G W++ A V+ L E + + +SWI +K+K YSF D
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLN 699
HP +I+ L++L + K GY+ S+ L D +E+ HSE+LAIAFGL+
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIA 811
Query: 700 TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKF-VNGHCTCRDF 754
TP SP+L++K+ +C DCH IK+I + REI+VRDS R H F +G C+C DF
Sbjct: 812 TPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/501 (30%), Positives = 259/501 (51%), Gaps = 29/501 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K G D V T LV+ Y K N ++ +KVFD + NVV+WT+LISGY +NS
Sbjct: 115 LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSM 174
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ + +F+ M G P + T AL + G Q+H VVK + V NS
Sbjct: 175 NDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNS 234
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +LY CG++ A F++ K+V++W ++I NG ++ L F M ++ +
Sbjct: 235 LINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLS 294
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
E + S+ +C + LR Q+H +K G+ + +R ++M Y KC + +A +LF
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 336 GMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSI 394
+ V N+V+W AMI+G Q ++G EA+ +FS++ G++P+ +T+S I
Sbjct: 355 EIGCVGNVVSWTAMISGFLQ-----------NDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 395 LTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL 454
LT + E +HA +KT + VGTAL++ Y K G++E A++VF + + +
Sbjct: 404 LTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 455 ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--SNAGMVYEALGYF 512
++W++M+ G+A + A+++F ++ G++PN+ TF L C +NA M G
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-----GQG 514
Query: 513 EMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCR 568
+ + IK +D +C L+ M+ + G IE A + K+ E + V W+ I+G
Sbjct: 515 KQFHG-FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYA 572
Query: 569 RHGNMELGFYAAEQLLKLKPK 589
+HG +++ K K K
Sbjct: 573 QHGQAMKALDVFKEMKKRKVK 593
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/466 (30%), Positives = 238/466 (51%), Gaps = 20/466 (4%)
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A +FD P + S+ SL+ G+ ++ + + A +FL++ G + L ++
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L G+Q+H +K+ DD SVG SL Y + K F+ ++E+NV++WTT+
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I N + L F +M +EG QPN FT + V G QVH++ +K G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 225
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ V NS++ LYLKCG V +A+ LFD ++VTWN+MI+G+A A+
Sbjct: 226 DKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA-----------ANG 274
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F + + ++ +F+S++ +C+ L L EQ+H +K GFL D + T
Sbjct: 275 LDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT 334
Query: 428 ALVNMYKKCGRIERASRVFVEMS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
AL+ Y KC + A R+F E+ ++SWT+MI+GF + +A+ LF +M GVR
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
PN+ T+ L A ++ + + ++++ Y+ + L+D +V+LG +EEA
Sbjct: 395 PNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVEEAAK 449
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKD 590
+D + + V WS +AG + G E +L K +KP +
Sbjct: 450 VFSGID-DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 197/423 (46%), Gaps = 50/423 (11%)
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L +A F++ ++ S+ +++ +G + R F + G++ + +S+ V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
T+ G Q+H IK G+ ++ V S++ Y+K + +K+FD M N+VTW
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
+I+G+A+ ++ E L++F ++ + G +P+ +TF++ L + +
Sbjct: 163 TTLISGYAR-----------NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGG 211
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
+G Q+H + +K G + V +L+N+Y KCG + +A +F + +++++W SMI+G+A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY-------EALGYFEMMQKE 518
+ L +AL +F M L VR ++ +F + C+N + + Y + +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 519 YKIKPVMDHYMC--LID---MFVRLGCI-------------------EEAFDF---IKKM 551
+ ++ + C ++D +F +GC+ EEA D +K+
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM-LLDIFVSAGRWEDV 610
PNE +SV + E+ Q++K + + LLD +V G+ E+
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 611 AVV 613
A V
Sbjct: 448 AKV 450
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/693 (32%), Positives = 387/693 (55%), Gaps = 18/693 (2%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + +++ SL+ C +L + +HA+ K G + + L+N+Y KC ++E
Sbjct: 383 DGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIET 442
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A F NVV W ++ Y + +F M P T + L C
Sbjct: 443 ALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L + LG+QIH+ ++K + + V + L +Y+ G L++A R K+V+SWTT+
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I + + L F +ML GI+ +E LT+ S C + +L+ G Q+H+ G+
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+S+L +N+++ LY +CG ++E+ F+ + + WNA+++G Q S +N
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ---------SGNN 673
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EAL +F ++N G+ + +TF S + S ++QG+Q+HA+ KTG+ S+ V
Sbjct: 674 --EEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL++MY KCG I A + F+E+ST+ +SW ++I ++ H +AL F+ M+ + VRP
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
N VT VG L+ACS+ G+V + + YFE M EY + P +HY+C++DM R G + A +F
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I++M +P+ ++W ++ C H NME+G +AA LL+L+P+D +Y +L +++ + +W
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 911
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCF 667
+ + + +E+ + + SWI +K+ ++SF D HP + EI + +L ++A
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Query: 668 GYKQQESFELTDE------ESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNF 721
GY Q+ F L +E + HSEKLAI+FGLL+ P PI V+K+ +C DCH +
Sbjct: 972 GY-VQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAW 1030
Query: 722 IKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
IK ++ ++ REIIVRD+ R H F G C+C+D+
Sbjct: 1031 IKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 256/484 (52%), Gaps = 19/484 (3%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E IHA I+ G V L+++Y + G ++ A++VFD L + SW ++ISG +N
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 154 SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
AI +F DM G PT + L+AC +ES+ +G+Q+H V+K DT V
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L SLY G+L SA F+ + +++ +++ T+I + G + + F +M +G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ TL S+ C +L G Q+H+ KLG+ASN ++ +++ LY KC ++ A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
F N+V WN M+ + + DL + IF ++ + P+ YT+ S
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDL-----------RNSFRIFRQMQIEEIVPNQYTYPS 495
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
IL C RL LE GEQIH+ +KT F + V + L++MY K G+++ A + + + +
Sbjct: 496 ILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SWT+MI G+ ++ +AL F ML G+R ++V A++AC AG+ +AL +
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC--AGL--QALKEGQ 611
Query: 514 MMQKEYKIKPV---MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH 570
+ + + + L+ ++ R G IEE++ ++ + N + W+ ++G ++
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQS 670
Query: 571 GNME 574
GN E
Sbjct: 671 GNNE 674
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/499 (28%), Positives = 248/499 (49%), Gaps = 19/499 (3%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
++ S+L C +SL E +H ++K G D +V LV++Y GN+ A+ +F N+
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ + V++ +LI+G Q E A+ +F M G P + TL + + ACS+ ++ G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q+HAY K + + +L +LY+ C + +A+ F +NV+ W ++ A G
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
+ R F +M E I PN++T SI C + L +G Q+HS IK + N V +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
++ +Y K G +D A + + ++V+W MIAG+ Q +N +AL+
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQ-----------YNFDDKALTT 578
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F ++ G++ D ++ ++ C+ L AL++G+QIHA +GF SD+ ALV +Y +
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSR 638
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG+IE + F + I+W ++++GF + +AL++F M G+ N TF A
Sbjct: 639 CGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSA 698
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE- 554
+ A S + + ++ K + LI M+ + G I +A +K E
Sbjct: 699 VKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDA----EKQFLEV 753
Query: 555 --PNEVIWSVFIAGCRRHG 571
NEV W+ I +HG
Sbjct: 754 STKNEVSWNAIINAYSKHG 772
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 250/515 (48%), Gaps = 23/515 (4%)
Query: 59 FQEAL--SVLTEGPKVQTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFL 115
FQE SV G + + LL+ C+ SL +H+ I+K G + + L
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKL 126
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTN 175
+ Y G++ A KVFD +P + +W +I + +F+ M+ P
Sbjct: 127 FDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNE 186
Query: 176 VTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
T L AC + + +QIHA ++ D T V N L LYS G ++ A + F+
Sbjct: 187 GTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFD 246
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
+R K+ SW +I +N + +R F M GI P + +S+ S C + SL +
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H L +KLG++S+ V N+++ LY G + A+ +F MS + VT+N +I G
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING--- 363
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
LS G +A+ +F +++ G++PD T +S++ CS L +G+Q+HA T
Sbjct: 364 --------LSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYT 415
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
K GF S+ + AL+N+Y KC IE A F+E ++ W M+ + +
Sbjct: 416 TKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSF 475
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LI 532
++F M + + PNQ T+ L C G + LG ++ + K ++ Y+C LI
Sbjct: 476 RIFRQMQIEEIVPNQYTYPSILKTCIRLGDL--ELGE-QIHSQIIKTNFQLNAYVCSVLI 532
Query: 533 DMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAG 566
DM+ +LG ++ A+D + + F +V+ W+ IAG
Sbjct: 533 DMYAKLGKLDTAWDIL--IRFAGKDVVSWTTMIAG 565
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 227/476 (47%), Gaps = 53/476 (11%)
Query: 170 GNYPTNVTLGTALTACSSLE-SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P + TL L C S+ G+++H+ ++K + + + L Y G L
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC-G 287
A K F+ + E+ + +W +I + F +M+SE + PNE T + + C G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNA 347
++ V Q+H+ + G + V N ++ LY + G VD A+++FDG+ + +W A
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 348 MIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
MI+G L+K++ A EA+ +F + G+ P Y FSS+L+ C ++ +LE G
Sbjct: 259 MISG------LSKNECEA-----EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 307
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH 467
EQ+H L LK GF SD V ALV++Y G + A +F MS R +++ ++I G +
Sbjct: 308 EQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA---------LGY------- 511
+A++LF+ M L G+ P+ T + ACS G ++ LG+
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 512 ---FEMMQKEYKIKPVMDHYM-------CLID-MFVRLGCIEE---AFDFIKKMDFE--- 554
+ K I+ +D+++ L + M V G +++ +F ++M E
Sbjct: 428 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK----LKPKDCESYAMLLDIFVSAGR 606
PN+ + + C R G++ELG Q++K L C ++L+D++ G+
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC---SVLIDMYAKLGK 540
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 148/305 (48%), Gaps = 2/305 (0%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G + + + C ++L + IHA +G D LV +Y +CG
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGK 641
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+EE+ F+ + ++W +L+SG+ Q+ E A+ VF+ M G N T G+A+ A
Sbjct: 642 IEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA 701
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S +++ GKQ+HA + K + +T V N+L S+Y+ CGS++ A K F + KN +SW
Sbjct: 702 ASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSW 761
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG-AQVHSLGI 303
+I A ++G + L F +M+ ++PN TL + S C + + G A S+
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
+ G + ++ + + GL+ A++ M + + W +++ ++ +
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGE 881
Query: 363 LSAHN 367
+AH+
Sbjct: 882 FAAHH 886
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 23/327 (7%)
Query: 269 SEGIQPNEFTLTSISSVC-GTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ GI+PN TL + C T SL G ++HS +KLG SN + + YL G +
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
A K+FD M + TWN MI +L++ N E +F ++ S + P+
Sbjct: 137 YGAFKVFDEMPERTIFTWNKMIK-----------ELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 388 LYTFSSILTIC-SRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
TFS +L C VA + EQIHA L G VV L+++Y + G ++ A RVF
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
+ + SW +MI+G + + +A++LF DM + G+ P F L+AC
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI---- 301
Query: 507 EALGYFEMMQK-EYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E+L E + K+ D Y+C L+ ++ LG + A M + + V ++
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS-QRDAVTYNTL 360
Query: 564 IAGCRR--HGNMELGFYAAEQLLKLKP 588
I G + +G + + L L+P
Sbjct: 361 INGLSQCGYGEKAMELFKRMHLDGLEP 387
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/712 (33%), Positives = 381/712 (53%), Gaps = 33/712 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT--FLVNVYGKCGNMEEAQK 130
+ S ++SL++ CV+ + L H H+++TG+ D + + F + ++E A+K
Sbjct: 29 ERSRHISLIERCVSLRQLKQT---HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLE 189
VFD +P+ N +W +LI Y P L+I FLDM+ E+ YP T + A + +
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
S+ LG+ +H VK D V NSL Y +CG L+SA K F I+EK+V+SW ++I
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
+ G + L F KM SE ++ + T+ + S C + +L G QV S +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD----------LA 359
NL + N+++ +Y KCG +++A++LFD M + VTW M+ G+A D +
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 360 KDDLSAHNG----------GTEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGE 408
+ D+ A N EAL +F +L MK + T S L+ C+++ ALE G
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHS 468
IH+ K G + V +AL++MY KCG +E++ VF + R + W++MI G A H
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 469 LSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHY 528
++A+ +F M A V+PN VTF ACS+ G+V EA F M+ Y I P HY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505
Query: 529 MCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKP 588
C++D+ R G +E+A FI+ M P+ +W + C+ H N+ L A +LL+L+P
Sbjct: 506 ACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEP 565
Query: 589 KDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHP 648
++ ++ +L +I+ G+WE+V+ ++ R L + S I I ++ F D HP
Sbjct: 566 RNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHP 625
Query: 649 QSAEIFKVLDELVEKAKCFGYKQQES--FELTDEESASV----YHSEKLAIAFGLLNTPI 702
S +++ L E++EK K GY+ + S ++ +EE HSEKLAI +GL++T
Sbjct: 626 MSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEA 685
Query: 703 VSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V+K+ +C DCH+ K+I+ L REIIVRD R H F NG C+C DF
Sbjct: 686 PKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDF 737
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 186/400 (46%), Gaps = 52/400 (13%)
Query: 25 LATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQEC 84
T+K+K+ VS+ + +Q P ++L + + +E K + V +L C
Sbjct: 189 FTTIKEKD-VVSWNSMINGFVQ---KGSPDKALELFKKME--SEDVKASHVTMVGVLSAC 242
Query: 85 VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFD----------- 133
++L + ++I + + + + ++++Y KCG++E+A+++FD
Sbjct: 243 AKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWT 302
Query: 134 --------------------NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
++P+ ++V+W +LIS Y QN +P A+ VF ++ N
Sbjct: 303 TMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMK 362
Query: 174 TN-VTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
N +TL + L+AC+ + ++ LG+ IH+Y+ K+ + V ++L +YS CG L + +
Sbjct: 363 LNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Query: 233 FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLS 291
FN + +++V W+ +IG +G + + F KM ++PN T T++ C T L
Sbjct: 423 FNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLV 482
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIA 350
+ H + G + I+ + + G +++A K + M + W A++
Sbjct: 483 DEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLG 542
Query: 351 G---HAQMMDLAKD------DLSAHNGGTEAL--SIFSKL 379
HA ++LA+ +L N G L +I++KL
Sbjct: 543 ACKIHAN-LNLAEMACTRLLELEPRNDGAHVLLSNIYAKL 581
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/686 (33%), Positives = 386/686 (56%), Gaps = 20/686 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+++ +L V SL+ + +H +K G V L+N+Y K A+ VFDN+
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLG 194
+++SW S+I+G QN A+ +F+ +L G P T+ + L A SSL E + L
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLS 436
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ+H + +K D+ V +L YS + A F R ++++W ++ ++
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQS 495
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
+ + L+ F+ M +G + ++FTL ++ CG + ++ G QVH+ IK GY +L V
Sbjct: 496 HDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-AL 373
+ I+ +Y+KCG + AQ FD + + V W MI+G + NG E A
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIE------------NGEEERAF 603
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+FS++ G+ PD +T +++ S L ALEQG QIHA LK +D VGT+LV+MY
Sbjct: 604 HVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A +F + + +W +M+ G A H + LQLF+ M G++P++VTF+
Sbjct: 664 AKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFI 723
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L+ACS++G+V EA + M +Y IKP ++HY CL D R G +++A + I+ M
Sbjct: 724 GVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSM 783
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
E + ++ +A CR G+ E G A +LL+L+P D +Y +L +++ +A +W+++ +
Sbjct: 784 EASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLA 843
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
+ + + K+ + +SWI +K+K++ F +D + Q+ I++ + +++ K GY +
Sbjct: 844 RTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPET 903
Query: 674 SFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
F L D +E A YHSEKLA+AFGLL+TP +PI V+K+ +C DCHN +K I +
Sbjct: 904 DFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKV 963
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
REI++RD+ R H+F +G C+C D+
Sbjct: 964 YNREIVLRDANRFHRFKDGICSCGDY 989
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 227/447 (50%), Gaps = 21/447 (4%)
Query: 147 ISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
+S Y+ + Q + F DM+E+ VT L ++S+ LG+Q+H +K
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ +V NSL ++Y A F+ + E++++SW +VI +NG V+ + F +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 267 MLSEGIQPNEFTLTSISSVCGTML-SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCG 325
+L G++P+++T+TS+ ++ L + QVH IK+ S+ V +++ Y +
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
+ EA+ LF+ + +LV WNAM+AG+ Q D G + L +F+ ++ G +
Sbjct: 467 CMKEAEILFE-RHNFDLVAWNAMMAGYTQSHD-----------GHKTLKLFALMHKQGER 514
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
D +T +++ C L A+ QG+Q+HA +K+G+ D+ V + +++MY KCG + A
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F + ++WT+MI+G + +A +F M L GV P++ T + LA S+
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT-IATLAKASSCLTA 633
Query: 506 YEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
E ++ K+ D ++ L+DM+ + G I++A+ K+++ N W+
Sbjct: 634 LEQGR--QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAM 690
Query: 564 IAGCRRHGNME--LGFYAAEQLLKLKP 588
+ G +HG + L + + L +KP
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKP 717
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/501 (25%), Positives = 219/501 (43%), Gaps = 62/501 (12%)
Query: 77 YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
+ L+ + L + HA I+ + + F++ L+++Y KCG++ A++VFD +P
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 137 RINVVSWTSLISGYVQNSQ-----PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
++VSW S+++ Y Q+S+ + A +F + + Y + +TL L C +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
+ H Y K + D V +L ++Y G + F + ++V+ W ++ A
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL--GIKLGYAS 309
E G + + S S G+ PNE TL ++ + G QV S G S
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSD---AGQVKSFANGNDASSVS 278
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ RN + YL H+G
Sbjct: 279 EIIFRNKGLSEYL-------------------------------------------HSGQ 295
Query: 370 TEA-LSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
A L F+ + S ++ D TF +L ++ +L G+Q+H + LK G + V +
Sbjct: 296 YSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNS 355
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+NMY K + A VF MS R LISW S+I G A + L +A+ LF +L G++P+
Sbjct: 356 LINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQ-KEYKIKPVMDHYM--CLIDMFVRLGCIEEAF 545
Q T L A S+ + E L + + KI V D ++ LID + R C++EA
Sbjct: 416 QYTMTSVLKAASS---LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 546 DFIKKMDFEPNEVIWSVFIAG 566
++ +F+ V W+ +AG
Sbjct: 473 ILFERHNFDL--VAWNAMMAG 491
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 144/272 (52%), Gaps = 1/272 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G + + ++ + C +++ + +HA+ +K+G D +V + ++++Y KCG+M
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSA 570
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ FD++P + V+WT++ISG ++N + E A HVF M G P T+ T A S
Sbjct: 571 AQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSC 630
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L ++ G+QIHA +K +D VG SL +Y+ CGS++ A F RI N+ +W +
Sbjct: 631 LTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAM 690
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCG-TMLSLRVGAQVHSLGIKLG 306
+ ++GE + L+ F +M S GI+P++ T + S C + L + S+ G
Sbjct: 691 LVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYG 750
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS 338
+ + + + GLV +A+ L + MS
Sbjct: 751 IKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/684 (34%), Positives = 370/684 (54%), Gaps = 49/684 (7%)
Query: 108 DFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML 167
+ F L+ Y K G + E + F+ LP + V+W LI GY + A+ + M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 168 E--AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
+ N T VTL T L SS + LGKQIH V+K E VG+ L +Y+ G
Sbjct: 131 RDFSANL-TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC 189
Query: 226 LNSAIKAFN------------------------------RIREKNVMSWTTVIGACGENG 255
++ A K F R EK+ +SW +I +NG
Sbjct: 190 ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG 249
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
A + + F +M +G++ +++ S+ CG + ++ G Q+H+ I+ + ++ V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSI 375
+++ +Y KC + A+ +FD M N+V+W AM+ G+ Q EA+ I
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT-----------GRAEEAVKI 358
Query: 376 FSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKK 435
F + SG+ PD YT ++ C+ + +LE+G Q H + +G + V V +LV +Y K
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGA 495
CG I+ ++R+F EM+ R +SWT+M++ +A + + +QLF+ M+ G++P+ VT G
Sbjct: 419 CGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 496 LAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
++ACS AG+V + YF++M EY I P + HY C+ID+F R G +EEA FI M F P
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 538
Query: 556 NEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKN 615
+ + W+ ++ CR GN+E+G +AAE L++L P Y +L I+ S G+W+ VA ++
Sbjct: 539 DAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRR 598
Query: 616 LTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESF 675
RE+ + + SWI+ K K++SF +D P +I+ L+EL K GYK SF
Sbjct: 599 GMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSF 658
Query: 676 ELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTA 730
D EE+ V YHSE+LAIAFGL+ P PI V K+ +C DCHN K I+S+T
Sbjct: 659 VHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTG 718
Query: 731 REIIVRDSKRLHKFVNGHCTCRDF 754
REI+VRD+ R H+F +G C+C DF
Sbjct: 719 REILVRDAVRFHRFKDGTCSCGDF 742
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 157/285 (55%), Gaps = 2/285 (0%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
+G K+ + S+L C +++ + IHA I++T +V + L+++Y KC +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHY 323
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+ VFD + + NVVSWT+++ GY Q + E A+ +FLDM +G P + TLG A++AC++
Sbjct: 324 AKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACAN 383
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ S+ G Q H + +V NSL +LY CG ++ + + FN + ++ +SWT +
Sbjct: 384 VSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAM 443
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI-KLG 306
+ A + G AV+ ++ F KM+ G++P+ TLT + S C + G + L + G
Sbjct: 444 VSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYG 503
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH-VNLVTWNAMIA 350
++ + ++ L+ + G ++EA + +GM + + W +++
Sbjct: 504 IVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 227/508 (44%), Gaps = 94/508 (18%)
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
R K IH +++ +T + N++ Y+ S A + F+RI + N+ SW ++ A
Sbjct: 23 RYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAY 82
Query: 252 GENGEAVQGLRFFSKMLS-EGIQPNEFTLT-SISSVCG---------------------- 287
+ G + F K+ +G+ N S+S + G
Sbjct: 83 SKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTL 142
Query: 288 -TMLSL-------RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSH 339
TML L +G Q+H IKLG+ S L V + ++Y+Y G + +A+K+F G+
Sbjct: 143 MTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 340 VNLVTWNAMIAG--HAQMMD--------LAKDDLS--------AHNG-GTEALSIFSKLN 380
N V +N+++ G M++ + KD +S A NG EA+ F ++
Sbjct: 203 RNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 381 SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G+K D Y F S+L C L A+ +G+QIHA ++T F + VG+AL++MY KC +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 441 RASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACS 500
A VF M + ++SWT+M+ G+ + +A+++F DM +G+ P+ T A++AC+
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 501 N----------------AGMV------------YEALGYFEMMQKEYKIKPVMD--HYMC 530
N +G++ Y G + + + V D +
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA 442
Query: 531 LIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK 587
++ + + G E KM +P+ V + I+ C R G +E G ++ KL
Sbjct: 443 MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG----QRYFKLM 498
Query: 588 PKD------CESYAMLLDIFVSAGRWED 609
+ Y+ ++D+F +GR E+
Sbjct: 499 TSEYGIVPSIGHYSCMIDLFSRSGRLEE 526
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 239/726 (32%), Positives = 404/726 (55%), Gaps = 38/726 (5%)
Query: 37 YQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEII 96
Y R+G+ +SE +R +L +L+ G ++ S+L+ C +++ + I
Sbjct: 127 YGRAGN-------SSEVIRCF----SLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI 172
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
H +K G D +V L+++Y + + A+ +FD +P ++ SW ++ISGY Q+
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+ A+ + L A + T V+L L+AC+ G IH+Y +K+ E + V N L
Sbjct: 233 KEAL-TLSNGLRAMDSVTVVSL---LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
LY+ G L K F+R+ ++++SW ++I A N + ++ + F +M IQP+
Sbjct: 289 IDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 277 FTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
TL S++S+ + +R V ++ G + ++ + N+++ +Y K GLVD A+ +F+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSG-MKPDLYTFSS 393
+ + ++++WN +I+G+AQ NG +EA+ +++ + G + + T+ S
Sbjct: 409 WLPNTDVISWNTIISGYAQ------------NGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L CS+ AL QG ++H LK G DV V T+L +MY KCGR+E A +F ++
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
+ W ++I H +A+ LF++ML GV+P+ +TFV L+ACS++G+V E FE
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
MMQ +Y I P + HY C++DM+ R G +E A FIK M +P+ IW ++ CR HGN+
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
+LG A+E L +++P+ + +L +++ SAG+WE V ++++ + L +T WS + +
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHS 688
+KV F + HP E+++ L L K K GY F L D +E + HS
Sbjct: 697 DNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHS 756
Query: 689 EKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGH 748
E+LAIAF L+ TP + I + K+ +C DCH+ K I+ +T REIIVRDS R H F NG
Sbjct: 757 ERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGV 816
Query: 749 CTCRDF 754
C+C D+
Sbjct: 817 CSCGDY 822
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 156/542 (28%), Positives = 269/542 (49%), Gaps = 40/542 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+L + C N L +A+ +HA +V + Q+ + LVN+Y GN+ A+ FD++
Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 139 NVVSWTSLISGYVQNSQPELAIHVF-LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+V +W +ISGY + I F L ML +G P T + L AC ++ G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H +K+ D V SL LYS ++ +A F+ + +++ SW +I ++G A
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 258 VQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
+ L LS G++ + T+ S+ S C G +HS IK G S L V N
Sbjct: 233 KEAL-----TLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
++ LY + G + + QK+FD M +L++WN++I + +L + L A+S+F
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY----ELNEQPL-------RAISLF 336
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKK 435
++ S ++PD T S+ +I S+L + + TL+ G FL D+ +G A+V MY K
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 436 CGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVG 494
G ++ A VF + +ISW ++I+G+A + + +A++++ M G + NQ T+V
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEAFDFIKKMD 552
L ACS AG + + + ++ + K +D ++ L DM+ + G +E+A ++
Sbjct: 457 VLPACSQAGALRQGM---KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP 513
Query: 553 FEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKPKDCESYAMLLDI-----FVSAG 605
N V W+ IA HG+ E +++L +KP D ++ LL V G
Sbjct: 514 -RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP-DHITFVTLLSACSHSGLVDEG 571
Query: 606 RW 607
+W
Sbjct: 572 QW 573
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 385/707 (54%), Gaps = 30/707 (4%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
EA L E G V + SY L + C +SLS+ ++H + + +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
++ +Y +C ++E+A K+FD + +N VS T++IS Y + + A+ +F ML +G+ P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 175 NVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
+ T L + + ++ G+QIHA+V++ +TS+ + ++Y CG L A + F+
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRV 294
++ K ++ T ++ + G A L+ F +++EG++ + F + + C ++ L +
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G Q+H+ KLG S + V ++ Y+KC + A + F + N V+W+A+I+G+ Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 355 MMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP-DLYTFSSILTICSRLVALEQGEQIHAL 413
M EA+ F L S + +T++SI CS L G Q+HA
Sbjct: 364 MSQF-----------EEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHAD 412
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K + +AL+ MY KCG ++ A+ VF M +++WT+ I+G A + + +A
Sbjct: 413 AIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEA 472
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
L+LFE M+ G++PN VTF+ L ACS+AG+V + + M ++Y + P +DHY C+ID
Sbjct: 473 LRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMID 532
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
++ R G ++EA F+K M FEP+ + W F++GC H N+ELG A E+L +L P+D
Sbjct: 533 IYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAG 592
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y + +++ AG+WE+ A + L E L + SWI+ K K++ F D HPQ+ EI
Sbjct: 593 YVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Query: 654 FKVLDELVEKAKCFGYKQQESFE--LTDEESASVYHSEKLAIAFGLL----NTPIVSPIL 707
++ L E G+ + + F+ +T+ + HSE+LAIAFGL+ N P +PI
Sbjct: 653 YEKLKEFD------GFMEGDMFQCNMTERREQLLDHSERLAIAFGLISVHGNAP--APIK 704
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
V K+ C DCH F K ++ +T EI++RDS+R H F G C+C D+
Sbjct: 705 VFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDY 751
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 2/151 (1%)
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
Q+ +L LS H EA +++ +G+ Y++ + C L +L G +H
Sbjct: 47 QGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH 106
Query: 412 ALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
++ G + V++ ++ MY +C +E A ++F EMS +S T+MI+ +A +
Sbjct: 107 D-RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGIL 165
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
+A+ LF ML +G +P + L + N
Sbjct: 166 DKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/688 (32%), Positives = 388/688 (56%), Gaps = 24/688 (3%)
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
S Y SL+ ++ L IHA ++ G F++T L++ G++ A++VFD+
Sbjct: 22 SFYASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD 78
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
LPR + W ++I GY +N+ + A+ ++ +M A P + T L ACS L +++G
Sbjct: 79 LPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN--RIREKNVMSWTTVIGACG 252
+ +HA V + + D V N L +LY+ C L SA F + E+ ++SWT ++ A
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 253 ENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLR 312
+NGE ++ L FS+M ++P+ L S+ + + L+ G +H+ +K+G
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTE 371
+ S+ +Y KCG V A+ LFD M NL+ WNAMI+G+A+ NG E
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK------------NGYARE 306
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ + ++PD + +S ++ C+++ +LEQ ++ ++ + DV + +AL++
Sbjct: 307 AIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALID 366
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
M+ KCG +E A VF R ++ W++MI G+ H + +A+ L+ M GV PN VT
Sbjct: 367 MFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVT 426
Query: 492 FVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKM 551
F+G L AC+++GMV E +F M ++KI P HY C+ID+ R G +++A++ IK M
Sbjct: 427 FLGLLMACNHSGMVREGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Query: 552 DFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVA 611
+P +W ++ C++H ++ELG YAA+QL + P + Y L +++ +A W+ VA
Sbjct: 486 PVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVA 545
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY-- 669
V+ +E+ L++ SW+ ++ ++ +F+ D HP+ EI + ++ + + K G+
Sbjct: 546 EVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVA 605
Query: 670 -KQQESFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIIT 726
K +L DEE+ HSE++AIA+GL++TP +P+ + K+ C +CH K+I+
Sbjct: 606 NKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLIS 665
Query: 727 SLTAREIIVRDSKRLHKFVNGHCTCRDF 754
L REI+VRD+ R H F +G C+C D+
Sbjct: 666 KLVDREIVVRDTNRFHHFKDGVCSCGDY 693
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 222/471 (47%), Gaps = 20/471 (4%)
Query: 55 RSLGFQEALSVLTEGPKVQTS----SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF 110
R+ FQ+AL + + + S ++ LL+ C L +HA + + G D F
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 111 VMTFLVNVYGKCGNMEEAQKVFDNLP--RINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
V L+ +Y KC + A+ VF+ LP +VSWT+++S Y QN +P A+ +F M +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
P V L + L A + L+ ++ G+ IHA VVK E + + SL ++Y+ CG + +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A F++++ N++ W +I +NG A + + F +M+++ ++P+ ++TS S C
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
+ SL ++ + Y ++ + ++++ ++ KCG V+ A+ +FD ++V W+AM
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 349 IAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE 408
I G+ H EA+S++ + G+ P+ TF +L C+ + +G
Sbjct: 396 IVGYG-----------LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW 444
Query: 409 QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
++++ + G +++A V M + ++ W ++++ H
Sbjct: 445 WFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
Query: 468 SLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE 518
H L + L + P+ L+ A +++ + + KE
Sbjct: 505 --RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKE 553
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/594 (35%), Positives = 341/594 (57%), Gaps = 18/594 (3%)
Query: 167 LEAGNYPTNVTL-GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGS 225
LE P + T L C+ + + G+ +HA++++ D +GN+L ++Y+ CGS
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 226 LNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSV 285
L A K F ++ +++ ++WTT+I ++ L FF++ML G PNEFTL+S+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 286 CGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTW 345
G Q+H +K G+ SN+ V ++++ LY + GL+D+AQ +FD + N V+W
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 346 NAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALE 405
NA+IAGHA+ +G +AL +F + G +P ++++S+ CS LE
Sbjct: 231 NALIAGHAR-----------RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLE 279
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFA 465
QG+ +HA +K+G G L++MY K G I A ++F ++ R ++SW S++T +A
Sbjct: 280 QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYA 339
Query: 466 NHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVM 525
H +A+ FE+M G+RPN+++F+ L ACS++G++ E Y+E+M+K+ I P
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEA 398
Query: 526 DHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
HY+ ++D+ R G + A FI++M EP IW + CR H N ELG YAAE + +
Sbjct: 399 WHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFE 458
Query: 586 LKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDG 645
L P D + +L +I+ S GRW D A V+ +E + + SW+ I++ ++ F ND
Sbjct: 459 LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDE 518
Query: 646 LHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESASV---YHSEKLAIAFGLLNT 700
HPQ EI + +E++ K K GY S + D++ V YHSEK+A+AF LLNT
Sbjct: 519 RHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNT 578
Query: 701 PIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P S I + K+ +C DCH IK+ + + REIIVRD+ R H F +G+C+C+D+
Sbjct: 579 PPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDY 632
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 218/437 (49%), Gaps = 26/437 (5%)
Query: 46 QLNGNSEPVRSLGFQEALSVLTEGPKVQTSS--------------YVSLLQECVNRKSLS 91
+LN PV E+L + ++TSS Y +LL++C K L
Sbjct: 18 RLNSLPAPVSEDSEDESLKFPSNDLLLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLI 77
Query: 92 NAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV 151
I+HAHI+++ D + L+N+Y KCG++EEA+KVF+ +P+ + V+WT+LISGY
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 152 QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTS 211
Q+ +P A+ F ML G P TL + + A ++ G Q+H + VK + +
Sbjct: 138 QHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVH 197
Query: 212 VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG 271
VG++L LY+ G ++ A F+ + +N +SW +I + L F ML +G
Sbjct: 198 VGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDG 257
Query: 272 IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQ 331
+P+ F+ S+ C + L G VH+ IK G N+++ +Y K G + +A+
Sbjct: 258 FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR 317
Query: 332 KLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTF 391
K+FD ++ ++V+WN+++ +AQ H G EA+ F ++ G++P+ +F
Sbjct: 318 KIFDRLAKRDVVSWNSLLTAYAQ-----------HGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 392 SSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST 451
S+LT CS L++G + L K G + + +V++ + G + RA R EM
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 452 R-TLISWTSMITGFANH 467
T W +++ H
Sbjct: 427 EPTAAIWKALLNACRMH 443
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 238/683 (34%), Positives = 363/683 (53%), Gaps = 19/683 (2%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LL+ ++ S+ ++HA IVKT S F+ +L+N+Y K + E A+ V P
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
NVVSWTSLISG QN A+ F +M G P + T A A +SL GKQIH
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
A VK D VG S +Y + A K F+ I E+N+ +W I +G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ + F + PN T + + C L L +G Q+H L ++ G+ +++ V N ++
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
Y KC + ++ +F M N V+W +++A + Q + K A ++ +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEK-----------ASVLYLR 300
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
++ + SS+L+ C+ + LE G IHA +K + VG+ALV+MY KCG
Sbjct: 301 SRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGC 360
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV--RPNQVTFVGAL 496
IE + + F EM + L++ S+I G+A+ AL LFE+M G PN +TFV L
Sbjct: 361 IEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLL 420
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPN 556
+ACS AG V + F+ M+ Y I+P +HY C++DM R G +E A++FIKKM +P
Sbjct: 421 SACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPT 480
Query: 557 EVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNL 616
+W CR HG +LG AAE L KL PKD ++ +L + F +AGRW + V+
Sbjct: 481 ISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREE 540
Query: 617 TREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFE 676
+ + + +SWI +K++V++F+ D H + EI L +L + + GYK
Sbjct: 541 LKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLS 600
Query: 677 LTD----EESASV-YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAR 731
L D E++A V +HSEKLA+AFGLL+ P+ PI + K+ +C DCH+F K ++ R
Sbjct: 601 LYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKR 660
Query: 732 EIIVRDSKRLHKFVNGHCTCRDF 754
EIIVRD+ R H+F +G C+C+D+
Sbjct: 661 EIIVRDNNRFHRFKDGICSCKDY 683
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 193/421 (45%), Gaps = 27/421 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
LG L S S+RLG+ +HA +VK + + N L ++YS SA
Sbjct: 8 ALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRL 67
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVG 295
+NV+SWT++I +NG L F +M EG+ PN+FT ++ G
Sbjct: 68 TPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
Q+H+L +K G ++ V S +Y K L D+A+KLFD + NL TWNA I+
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISN---- 183
Query: 356 MDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALT 414
S +G EA+ F + P+ TF + L CS + L G Q+H L
Sbjct: 184 --------SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQAL 474
L++GF +DV V L++ Y KC +I + +F EM T+ +SW S++ + + +A
Sbjct: 236 LRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS 295
Query: 475 QLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM----C 530
L+ V + L+AC AGM LG + +K ++ +
Sbjct: 296 VLYLRSRKDIVETSDFMISSVLSAC--AGMAGLELG---RSIHAHAVKACVERTIFVGSA 350
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
L+DM+ + GCIE++ +M E N V + I G G +++ E+ + P+
Sbjct: 351 LVDMYGKCGCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEE---MAPRG 406
Query: 591 C 591
C
Sbjct: 407 C 407
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 154/321 (47%), Gaps = 21/321 (6%)
Query: 60 QEALSVLTEGPKV----QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL 115
+EA+ E ++ + ++ + L C + L+ +H ++++G D V L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 116 VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL----DMLEAGN 171
++ YGKC + ++ +F + N VSW SL++ YVQN + E A ++L D++E +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 172 YPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIK 231
+ + + L+AC+ + + LG+ IHA+ VK E VG++L +Y CG + + +
Sbjct: 311 F----MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGI--QPNEFTLTSISSVCGTM 289
AF+ + EKN+++ ++IG G+ L F +M G PN T S+ S C
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 290 LSLRVGAQV-HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNA 347
++ G ++ S+ G + I+ + + G+V+ A + M + W A
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 348 M-----IAGHAQMMDLAKDDL 363
+ + G Q+ LA ++L
Sbjct: 487 LQNACRMHGKPQLGLLAAENL 507
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/690 (33%), Positives = 378/690 (54%), Gaps = 19/690 (2%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K ++ +L+ C L+ + +H H+V+ G D V+ L+ +Y KCG+++ A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+ +FD +PR +++SW ++ISGY +N + +F M P +TL + ++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVI 248
RLG+ IHAYV+ D SV NSL +Y GS A K F+R+ K+++SWTT+I
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
N + + + M + ++P+E T+ ++ S C T+ L G ++H L IK
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S + V N+++ +Y KC +D+A +F + N+++W ++IAG L +N
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAG-----------LRLNNR 479
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL IF + ++P+ T ++ L C+R+ AL G++IHA L+TG D + A
Sbjct: 480 CFEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA 538
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L++MY +CGR+ A F + + SW ++TG++ ++LF+ M+ + VRP+
Sbjct: 539 LLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPD 597
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
++TF+ L CS + MV + L YF M+ +Y + P + HY C++D+ R G ++EA FI
Sbjct: 598 EITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACVVDLLGRAGELQEAHKFI 656
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+KM P+ +W + CR H ++LG +A+ + +L K Y +L +++ G+W
Sbjct: 657 QKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWR 716
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
+VA V+ + +E L+ SW+ +K KV++F +D HPQ+ EI VL+ EK G
Sbjct: 717 EVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
Query: 669 YKQQESFELTDEESAS-----VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
+ DE S HSE+ AIAFGL+NT PI V K+ +MC +CH+ +K
Sbjct: 777 LTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVK 836
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
I+ REI VRD++ H F +G C+C D
Sbjct: 837 FISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 152/577 (26%), Positives = 285/577 (49%), Gaps = 37/577 (6%)
Query: 59 FQEALSVLTEGPKVQTSS----YVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
+EA+ +L +++ + +V+L++ C +++ +++ + + S +
Sbjct: 75 LEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNA 134
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
+ ++ + GN+ +A VF + N+ SW L+ GY + + A+ ++ ML G
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 175 NV-TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
+V T L C + + GK++H +VV+Y E D V N+L ++Y CG + SA F
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLF 254
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+R+ ++++SW +I ENG +GL F M + P+ TLTS+ S C + R
Sbjct: 255 DRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRR 314
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
+G +H+ I G+A ++ V NS+ +YL G EA+KLF M ++V+W MI+G+
Sbjct: 315 LGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYE 374
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ D +A+ + ++ +KPD T +++L+ C+ L L+ G ++H L
Sbjct: 375 --YNFLPD---------KAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKL 423
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+K +S V+V L+NMY KC I++A +F + + +ISWTS+I G ++ +A
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEA 483
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CL 531
L M + ++PN +T ALAAC+ G + + E+ + +D ++ L
Sbjct: 484 LIFLRQMKMT-LQPNAITLTAALAACARIGAL---MCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGC--RRHGNMELGFYAAEQLLKLKP 588
+DM+VR G + A+ + + + +V W++ + G R G+M + + +++P
Sbjct: 540 LDMYVRCGRMNTAW---SQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRP 596
Query: 589 KD---------CESYAMLLDIFVSAGRWEDVAVVKNL 616
+ C M+ + + ED V NL
Sbjct: 597 DEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL 633
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 160/325 (49%), Gaps = 27/325 (8%)
Query: 249 GACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
G C NG+ + ++ + M + +E ++ +C + G++V+S+ + +
Sbjct: 68 GLCA-NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSS 126
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
+ + N+ + ++++ G + +A +F MS NL +WN ++ G+A+
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAK-----------QGY 175
Query: 369 GTEALSIFSK-LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ ++ + L G+KPD+YTF +L C + L +G+++H ++ G+ D+ V
Sbjct: 176 FDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVN 235
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
AL+ MY KCG ++ A +F M R +ISW +MI+G+ + + H+ L+LF M V P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQK--EYKIKP--VMDHYMC--LIDMFVRLGCI 541
+ +T ++AC E LG + + Y I +D +C L M++ G
Sbjct: 296 DLMTLTSVISAC-------ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAG 566
EA +M+ + V W+ I+G
Sbjct: 349 REAEKLFSRME-RKDIVSWTTMISG 372
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 18/231 (7%)
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
L A+ EA+ + + + + D F +++ +C A E+G +++++ L +
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML- 481
V +G A + M+ + G + A VF +MS R L SW ++ G+A +A+ L+ ML
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRL 538
+ GV+P+ TF L C G+ A G + +++ Y++ +D LI M+V+
Sbjct: 189 VGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELD--IDVVNALITMYVKC 244
Query: 539 GCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQL 583
G ++ A FD + + D + W+ I+G +G G F+A L
Sbjct: 245 GDVKSARLLFDRMPRRDI----ISWNAMISGYFENGMCHEGLELFFAMRGL 291
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/693 (32%), Positives = 387/693 (55%), Gaps = 21/693 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQ-DFFVMTFLVNVYGKCGNMEE 127
GP + + VS L C + IHA ++K+ +H + +V L+ +Y +CG M +
Sbjct: 279 GPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQ 338
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
A+++ + +VV+W SLI GYVQN + A+ F DM+ AG+ V++ + + A
Sbjct: 339 AERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGR 398
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L ++ G ++HAYV+K+ + + VGN+L +YS C +AF R+ +K+++SWTTV
Sbjct: 399 LSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV 458
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +N V+ L F + + ++ +E L SI + S+ + ++H ++ G
Sbjct: 459 IAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL 518
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ ++N ++ +Y KC + A ++F+ + ++V+W +MI+ SA N
Sbjct: 519 LDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISS------------SALN 565
Query: 368 GG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G +EA+ +F ++ +G+ D IL+ + L AL +G +IH L+ GF + +
Sbjct: 566 GNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 625
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
A+V+MY CG ++ A VF + + L+ +TSMI + H A++LF+ M V
Sbjct: 626 VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ ++F+ L ACS+AG++ E G+ ++M+ EY+++P +HY+CL+DM R C+ EAF+
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745
Query: 547 FIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGR 606
F+K M EP +W +A CR H E+G AA++LL+L+PK+ + ++ ++F GR
Sbjct: 746 FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 805
Query: 607 WEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK-AK 665
W DV V+ + + + SWI + KV+ F D HP+S EI++ L E+ K +
Sbjct: 806 WNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Query: 666 CFGYKQQESFELTD-EESASVY----HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY F L + +E V HSE++AIA+GLL TP + + + K+ +CRDCH
Sbjct: 866 EVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHT 925
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
F K+++ L R+I++RD+ R H F +G C+C D
Sbjct: 926 FCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/472 (29%), Positives = 251/472 (53%), Gaps = 26/472 (5%)
Query: 12 CTLETKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPK 71
C++ T +PS + N V Q KL +G V + FQ L V
Sbjct: 30 CSIPT---EPSCRRNPFRQSNQPV--QVPSPKLACFDG----VLTEAFQR-LDVSENNSP 79
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKT-GSHQDFFVMTFLVNVYGKCGNMEEAQK 130
V+ +YV L+ C R+++S +H+ I KT S + F+ LV +YGKCG++++A+K
Sbjct: 80 VEAFAYV--LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEK 137
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES 190
VFD +P +W ++I YV N +P A+ ++ +M G + L AC+ L
Sbjct: 138 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 197
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NVMSWTTVIG 249
IR G ++H+ +VK + N+L S+Y+ L++A + F+ +EK + + W +++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG-YA 308
+ +G++++ L F +M G PN +T+ S + C ++G ++H+ +K ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S L V N+++ +Y +CG + +A+++ M++ ++VTWN++I G+ Q +
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMY---------- 367
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EAL FS + ++G K D + +SI+ RL L G ++HA +K G+ S++ VG
Sbjct: 368 -KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNT 426
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
L++MY KC R F+ M + LISWT++I G+A + +AL+LF D+
Sbjct: 427 LIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 206/413 (49%), Gaps = 32/413 (7%)
Query: 164 LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYST 222
LD+ E N P L C ++ G+Q+H+ + K + + + + L +Y
Sbjct: 71 LDVSE-NNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGK 128
Query: 223 CGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
CGSL+ A K F+ + ++ +W T+IGA NGE L + M EG+ + ++
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHV-N 341
C + +R G+++HSL +KLGY S + N+++ +Y K + A++LFDG +
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
V WN++++ + S E L +F +++ +G P+ YT S LT C
Sbjct: 249 AVLWNSILSSY-----------STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF 297
Query: 402 VALEQGEQIHALTLKTG-FLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ G++IHA LK+ S++ V AL+ MY +CG++ +A R+ +M+ +++W S+
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSL 357
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I G+ + + +AL+ F DM+ AG + ++V+ +AA +G + L E+ Y
Sbjct: 358 IKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA---SGRLSNLLAGMEL--HAYV 412
Query: 521 IKPVMDHYM----CLIDMFVR--LGC-IEEAFDFIKKMDFEPNEVIWSVFIAG 566
IK D + LIDM+ + L C + AF + D + W+ IAG
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL----ISWTTVIAG 461
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 177/358 (49%), Gaps = 16/358 (4%)
Query: 54 VRSLGFQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
V++L ++EAL ++ G K S S++ +L +HA+++K G +
Sbjct: 362 VQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNL 421
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
V L+++Y KC + F + +++SWT++I+GY QN A+ +F D+ +
Sbjct: 422 QVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK 481
Query: 170 GNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSA 229
+ LG+ L A S L+S+ + K+IH ++++ + DT + N L +Y C ++ A
Sbjct: 482 RMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-KGLLDTVIQNELVDVYGKCRNMGYA 540
Query: 230 IKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
+ F I+ K+V+SWT++I + NG + + F +M+ G+ + L I S ++
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
+L G ++H ++ G+ + +++ +Y CG + A+ +FD + L+ + +MI
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
+ H G A+ +F K+ + PD +F ++L CS L++G
Sbjct: 661 NAYGM-----------HGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEG 707
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 249/701 (35%), Positives = 391/701 (55%), Gaps = 30/701 (4%)
Query: 72 VQTSSYVSLLQE-----CVNRKSLSNAEIIHAHIVKTGSHQDFFVM--TFLVNVYGKCGN 124
V SYV LL L +H H++ TG DF V LVN+Y KCG+
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGS 364
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A++VF + + VSW S+I+G QN A+ + M P + TL ++L++
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+SL+ +LG+QIH +K + + SV N+L +LY+ G LN K F+ + E + +SW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 245 TTVIGACGENGEAV-QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGI 303
++IGA + ++ + + F G + N T +S+ S ++ +G Q+H L +
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 304 KLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMIAGHAQMMDLAKDD 362
K A N+++ Y KCG +D +K+F M+ + VTWN+MI+G+ LAK
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAK-- 602
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSD 422
AL + + +G + D + ++++L+ + + LE+G ++HA +++ SD
Sbjct: 603 ---------ALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 423 VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLL 482
VVVG+ALV+MY KCGR++ A R F M R SW SMI+G+A H +AL+LFE M L
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 483 AG-VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G P+ VTFVG L+ACS+AG++ E +FE M Y + P ++H+ C+ D+ R G +
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 542 EEAFDFIKKMDFEPNEVIW-SVFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLD 599
++ DFI+KM +PN +IW +V A CR +G ELG AAE L +L+P++ +Y +L +
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ + GRWED+ + ++ + + +SW+ +KD V+ F D HP + I+K L E
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKE 893
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGL-LNTPIVSPILVVKSTT 713
L K + GY Q F L D +E YHSEKLA+AF L PI ++K+
Sbjct: 894 LNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLR 953
Query: 714 MCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+C DCH+ K I+ + R+II+RDS R H F +G C+C DF
Sbjct: 954 VCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDF 994
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 217/434 (50%), Gaps = 23/434 (5%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
+S +Q CV + A H+ + K +D ++ L+N Y + G+ A+KVFD +P
Sbjct: 7 LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLES--IRLGK 195
N VSW ++SGY +N + + A+ DM++ G + + L AC + S I G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTC-GSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
QIH + K D V N L S+Y C GS+ A+ AF I KN +SW ++I +
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTS-ISSVCG-TMLSLRVGAQVHSLGIKLGYASNLR 312
G+ R FS M +G +P E+T S +++ C T +R+ Q+ K G ++L
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 313 VRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEA 372
V + ++ + K G + A+K+F+ M N VT N ++ G L G EA
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG-----------LVRQKWGEEA 293
Query: 373 LSIFSKLNSS-GMKPDLYT--FSSILTIC-SRLVALEQGEQIHALTLKTGFLSDVV-VGT 427
+F +NS + P+ Y SS + V L++G ++H + TG + +V +G
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
LVNMY KCG I A RVF M+ + +SW SMITG + +A++ ++ M + P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 488 NQVTFVGALAACSN 501
T + +L++C++
Sbjct: 414 GSFTLISSLSSCAS 427
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 153/529 (28%), Positives = 257/529 (48%), Gaps = 30/529 (5%)
Query: 94 EIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQN 153
E I I K+G D FV + LV+ + K G++ A+KVF+ + N V+ L+ G V+
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 154 SQPELAIHVFLDM--LEAGNYPTNVTLGTALTACSSLESIRL--GKQIHAYVVKYQTED- 208
E A +F+DM + + + V L ++ S E + L G+++H +V+ D
Sbjct: 288 KWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDF 347
Query: 209 DTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+GN L ++Y+ CGS+ A + F + +K+ +SW ++I +NG ++ + + M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 269 SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD 328
I P FTL S S C ++ ++G Q+H +KLG N+ V N++M LY + G ++
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLN 467
Query: 329 EAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDL 388
E +K+F M + V+WN++I LA+ + S EA+ F +G K +
Sbjct: 468 ECRKIFSSMPEHDQVSWNSIIGA------LARSERSL----PEAVVCFLNAQRAGQKLNR 517
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
TFSS+L+ S L E G+QIH L LK + AL+ Y KCG ++ ++F
Sbjct: 518 ITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 449 MS-TRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNA----- 502
M+ R ++W SMI+G+ ++ L +AL L ML G R + + L+A ++
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 503 GMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSV 562
GM A ++ + + L+DM+ + G ++ A F M N W+
Sbjct: 638 GMEVHACSVRACLESDVVVGSA------LVDMYSKCGRLDYALRFFNTMPVR-NSYSWNS 690
Query: 563 FIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWED 609
I+G RHG E L + +L P D ++ +L AG E+
Sbjct: 691 MISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+L G ++ + Y ++L + +L +HA V+ D V + LV++Y KCG
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM-LEAGNYPTNVTLGTALT 183
++ A + F+ +P N SW S+ISGY ++ Q E A+ +F M L+ P +VT L+
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 184 ACSSLESIRLG-KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK-NV 241
ACS + G K + Y + + + G L+ ++ K NV
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 242 MSWTTVIGAC 251
+ W TV+GAC
Sbjct: 790 LIWRTVLGAC 799
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 383/696 (55%), Gaps = 17/696 (2%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+++ G ++ + ++ + + + +S+ E +H I+K+G + V LV Y K
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+KVFD + +V+SW S+I+GYV N E + VF+ ML +G T+ +
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
C+ I LG+ +H+ VK + N+L +YS CG L+SA F + +++V+S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T++I G A + ++ F +M EGI P+ +T+T++ + C L G +VH +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
++ V N++M +Y KCG + EA+ +F M ++++WN +I G+ S
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY-----------S 474
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
+ EALS+F+ L PD T + +L C+ L A ++G +IH ++ G+ SD
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
V +LV+MY KCG + A +F +++++ L+SWT MI G+ H +A+ LF M A
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
G+ ++++FV L ACS++G+V E +F +M+ E KI+P ++HY C++DM R G + +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+ FI+ M P+ IW + GCR H +++L AE++ +L+P++ Y ++ +I+
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
A +WE V ++ + L + SWI IK +V F D +P++ I L ++ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 664 AKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY + L D +E A HSEKLA+A G++++ I V K+ +C DC
Sbjct: 775 MIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDC 834
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K ++ LT REI++RDS R H+F +GHC+CR F
Sbjct: 835 HEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGF 870
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/508 (30%), Positives = 271/508 (53%), Gaps = 28/508 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+ + S+LQ C + KSL + + + I G D + + L +Y CG+++EA +V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD + + W L++ ++ +I +F M+ +G + T + SSL S+
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G+Q+H +++K + SVGNSL + Y ++SA K F+ + E++V+SW ++I
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
NG A +GL F +ML GI+ + T+ S+ + C + +G VHS+G+K ++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 312 RVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE 371
R N+++ +Y KCG +D A+ +F MS ++V++ +MIAG+ A++ L+ E
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGY------AREGLAG-----E 380
Query: 372 ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
A+ +F ++ G+ PD+YT +++L C+R L++G+++H + D+ V AL++
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR--PNQ 489
MY KCG ++ A VF EM + +ISW ++I G++ + +++AL LF ++LL R P++
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDE 499
Query: 490 VTFVGALAACSNAGMV---YEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA-- 544
T L AC++ E GY M + + V + L+DM+ + G + A
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHVANS---LVDMYAKCGALLLAHM 555
Query: 545 -FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
FD I D V W+V IAG HG
Sbjct: 556 LFDDIASKDL----VSWTVMIAGYGMHG 579
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 213/414 (51%), Gaps = 16/414 (3%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTG-SHQDFFVMTFLV 116
G + +L G ++ ++ VS+ C + + +S +H+ VK S +D F T L+
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT-LL 338
Query: 117 NVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNV 176
++Y KCG+++ A+ VF + +VVS+TS+I+GY + A+ +F +M E G P
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
T+ L C+ + GK++H ++ + D V N+L +Y+ CGS+ A F+ +
Sbjct: 399 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 458
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLRVG 295
R K+++SW T+IG +N A + L F+ +L E P+E T+ + C ++ + G
Sbjct: 459 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518
Query: 296 AQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM 355
++H ++ GY S+ V NS++ +Y KCG + A LFD ++ +LV+W MIAG+
Sbjct: 519 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM- 577
Query: 356 MDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
H G EA+++F+++ +G++ D +F S+L CS +++G + +
Sbjct: 578 ----------HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 416 KTGFLSDVVVGTA-LVNMYKKCGRIERASRVFVEMSTRTLIS-WTSMITGFANH 467
+ V A +V+M + G + +A R M + W +++ G H
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/728 (32%), Positives = 380/728 (52%), Gaps = 64/728 (8%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+ + C S+ E HA + TG + FV LV +Y +C ++ +A+KVFD + +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
VVSW S+I Y + +P++A+ +F M E G P N+TL L C+SL + LGKQ+H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ V + + VGN L +Y+ CG ++ A F+ + K+V+SW ++ + G
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 259 QGLRFFSK-----------------------------------MLSEGIQPNEFTLTSIS 283
+R F K MLS GI+PNE TL S+
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 284 SVCGTMLSLRVGAQVHSLGIKL-------GYASNLRVRNSIMYLYLKCGLVDEAQKLFDG 336
S C ++ +L G ++H IK G+ V N ++ +Y KC VD A+ +FD
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 337 MS--HVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL--NSSGMKPDLYTFS 392
+S ++VTW MI G++Q H +AL + S++ +P+ +T S
Sbjct: 433 LSPKERDVVTWTVMIGGYSQ-----------HGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGRIERASRVFVEMST 451
L C+ L AL G+QIHA L+ + + V L++MY KCG I A VF M
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMA 541
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
+ ++WTS++TG+ H +AL +F++M G + + VT + L ACS++GM+ + + Y
Sbjct: 542 KNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEY 601
Query: 512 FEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
F M+ + + P +HY CL+D+ R G + A I++M EP V+W F++ CR HG
Sbjct: 602 FNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
Query: 572 NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
+ELG YAAE++ +L SY +L +++ +AGRW+DV +++L R + + + SW+
Sbjct: 662 KVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL---TDEESASVY-- 686
+F D HP + EI++VL + +++ K GY + F L DEE +
Sbjct: 722 EGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFE 781
Query: 687 HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVN 746
HSEKLA+A+G+L TP + I + K+ +C DCH ++ + +II+RDS R H F N
Sbjct: 782 HSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKN 841
Query: 747 GHCTCRDF 754
G C+C+ +
Sbjct: 842 GSCSCKGY 849
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 152/542 (28%), Positives = 265/542 (48%), Gaps = 46/542 (8%)
Query: 88 KSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN--VVSWTS 145
K++S ++IH ++ G + + L++ Y G + A + P + V W S
Sbjct: 39 KTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 146 LISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQ 205
LI Y N +++F M P N T AC + S+R G+ HA +
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 206 TEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFS 265
+ VGN+L ++YS C SL+ A K F+ + +V+SW ++I + + G+ L FS
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 266 KMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKC 324
+M +E G +P+ TL ++ C ++ + +G Q+H + N+ V N ++ +Y KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 325 GLVDEAQKLFDGMSHVNLVTWNAMIAGHAQM-------------------MDL-----AK 360
G++DEA +F MS ++V+WNAM+AG++Q+ MD+ A
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL----- 415
+ G EAL + ++ SSG+KP+ T S+L+ C+ + AL G++IH +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 416 --KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST--RTLISWTSMITGFANHSLSH 471
K G + +V L++MY KC +++ A +F +S R +++WT MI G++ H ++
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 472 QALQLFEDMLLAG--VRPNQVTFVGALAACSN--AGMVYEALGYFEMMQKEYKIKPVMDH 527
+AL+L +M RPN T AL AC++ A + + + + + ++ + + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 528 YMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLK 585
CLIDM+ + G I +A M NEV W+ + G HG E LG + + +
Sbjct: 518 --CLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 586 LK 587
K
Sbjct: 575 FK 576
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 207/429 (48%), Gaps = 59/429 (13%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + + V++L C + + S + +H V + Q+ FV LV++Y KCG M+EA
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVF------------------------- 163
VF N+ +VVSW ++++GY Q + E A+ +F
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 164 ----------LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE------ 207
ML +G P VTL + L+ C+S+ ++ GK+IH Y +KY +
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 208 -DDTSVGNSLCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFF 264
D+ V N L +Y+ C +++A F+ + +E++V++WT +IG ++G+A + L
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELL 463
Query: 265 SKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIK-LGYASNLRVRNSIMYLY 321
S+M E Q PN FT++ C ++ +LR+G Q+H+ ++ A L V N ++ +Y
Sbjct: 464 SEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMY 523
Query: 322 LKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNS 381
KCG + +A+ +FD M N VTW +++ G+ H G EAL IF ++
Sbjct: 524 AKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM-----------HGYGEEALGIFDEMRR 572
Query: 382 SGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIE 440
G K D T +L CS ++QG E + + G LV++ + GR+
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 441 RASRVFVEM 449
A R+ EM
Sbjct: 633 AALRLIEEM 641
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 209/431 (48%), Gaps = 75/431 (17%)
Query: 216 LCSLYSTCGSLNSAIKAFNRI--REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
L S Y + G L+ A+ R + V W ++I + G+NG A + L F M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+ +T + CG + S+R G H+L + G+ SN+ V N+++ +Y +C + +A+K+
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFS 392
FD MS ++V+WN++I +A+ L K + AL +FS++ N G +PD T
Sbjct: 185 FDEMSVWDVVSWNSIIESYAK---LGKPKV--------ALEMFSRMTNEFGCRPDNITLV 233
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
++L C+ L G+Q+H + + + ++ VG LV+MY KCG ++ A+ VF MS +
Sbjct: 234 NVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK 293
Query: 453 TLISWTSM-----------------------------------ITGFANHSLSHQALQLF 477
++SW +M I+G+A L ++AL +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 478 EDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKE---YKIK-PV-------MD 526
ML +G++PN+VT + L+ C++ G + M KE Y IK P+ D
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGAL--------MHGKEIHCYAIKYPIDLRKNGHGD 405
Query: 527 HYMC---LIDMFVRLGCIEEAFDFIKKMDFEPNEVI-WSVFIAGCRRHGNMELGFYAAEQ 582
M LIDM+ + ++ A + + +V+ W+V I G +HG+ A E
Sbjct: 406 ENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN---KALEL 462
Query: 583 LLKLKPKDCES 593
L ++ +DC++
Sbjct: 463 LSEMFEEDCQT 473
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/687 (32%), Positives = 368/687 (53%), Gaps = 19/687 (2%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFF--VMTFLVNVYGKCGNMEEAQKVFD 133
++ +LL C + + +HA VK G + F V L+ Y + ++ A +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 134 NLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRL 193
+P + V++ +LI+GY ++ +IH+FL M ++G+ P++ T L A L L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 194 GKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGE 253
G+Q+HA V D SVGN + YS + F+ + E + +S+ VI + +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 254 NGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ L FF +M G F ++ S+ + SL++G Q+H + S L V
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
NS++ +Y KC + +EA+ +F + V+W A+I+G+ Q H G L
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK--------GLHGAG---L 437
Query: 374 SIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
+F+K+ S ++ D TF+++L + +L G+Q+HA +++G L +V G+ LV+MY
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMY 497
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
KCG I+ A +VF EM R +SW ++I+ A++ A+ F M+ +G++P+ V+ +
Sbjct: 498 AKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
G L ACS+ G V + YF+ M Y I P HY C++D+ R G EA + +M F
Sbjct: 558 GVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPF 617
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKL-KPKDCESYAMLLDIFVSAGRWEDVAV 612
EP+E++WS + CR H N L AAE+L + K +D +Y + +I+ +AG WE V
Sbjct: 618 EPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRD 677
Query: 613 VKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ 672
VK RE + + +SW+ + K++ F ND HP EI + ++EL + + GYK
Sbjct: 678 VKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPD 737
Query: 673 ESFELTD-EESASV----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITS 727
S + D +E + YHSE+LA+AF L++TP PI+V+K+ CRDCH IK+I+
Sbjct: 738 TSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISK 797
Query: 728 LTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ REI VRD+ R H F G C+C D+
Sbjct: 798 IVKREITVRDTSRFHHFSEGVCSCGDY 824
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 152/576 (26%), Positives = 268/576 (46%), Gaps = 52/576 (9%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYV 78
RQPS AT D +R +++I+ +++ RS E L L G Q S+
Sbjct: 22 RQPSP--ATFLDT------RRVDARIIKTGFDTDTCRSNFIVEDL--LRRG---QVSAAR 68
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+ E ++ ++S +I H+ K G++ A+ +FD +P
Sbjct: 69 KVYDEMPHKNTVSTNTMISGHV--------------------KTGDVSSARDLFDAMPDR 108
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSSLESIRLGKQ 196
VV+WT L+ Y +NS + A +F M + + P +VT T L C+ Q
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 197 IHAYVVK--YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
+HA+ VK + T +V N L Y L+ A F I EK+ +++ T+I ++
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G + + F KM G QP++FT + + + +G Q+H+L + G++ + V
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVG 288
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
N I+ Y K V E + LFD M ++ V++N +I+ ++Q D A +L
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ-----ADQYEA------SLH 337
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
F ++ G + F+++L+I + L +L+ G Q+H L S + VG +LV+MY
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYA 397
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
KC E A +F + RT +SWT++I+G+ L L+LF M + +R +Q TF
Sbjct: 398 KCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L A ++ + + + ++ V L+DM+ + G I++A ++M +
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMP-D 515
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLK--LKP 588
N V W+ I+ +G+ E A ++++ L+P
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 202/418 (48%), Gaps = 16/418 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L + G + ++ +L+ V + + +HA V TG +D V +++ Y K
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
+ E + +FD +P ++ VS+ +IS Y Q Q E ++H F +M G N T L
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+ ++L S+++G+Q+H + + VGNSL +Y+ C A F + ++ +
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTV 418
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
SWT +I + G GL+ F+KM ++ ++ T ++ + SL +G Q+H+
Sbjct: 419 SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
I+ G N+ + ++ +Y KCG + +A ++F+ M N V+WNA+I+ HA D
Sbjct: 479 IRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD----- 533
Query: 363 LSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLS 421
G A+ F+K+ SG++PD + +LT CS +EQG E A++ G
Sbjct: 534 ------GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITG---FANHSLSHQALQ 475
++++ + GR A ++ EM I W+S++ N SL+ +A +
Sbjct: 588 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAE 645
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 251/776 (32%), Positives = 392/776 (50%), Gaps = 99/776 (12%)
Query: 77 YVSLLQECV--NRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
Y + L+ C+ R SL A +H +I+ G ++ L++VY K + A+++FD
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 135 LPRINVVSWTSLISGYV---------------------------------QNSQPELAIH 161
+ + ++ T+++SGY N+ AI+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 162 VFLDMLEAGNYPTNVTLGTALTACSSL-ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
+F M G P N T + L + + + + Q HA +K TSV N+L S+Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 221 STCGS----LNSAIKAFNRIREKNVMSWTTVIGACGENG------EAVQG---------- 260
S C S L+SA K F+ I EK+ SWTT++ +NG E ++G
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 261 ----------------LRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
L +M+S GI+ +EFT S+ C T L++G QVH+ ++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLA----- 359
S NS++ LY KCG DEA+ +F+ M +LV+WNA+++G+ +
Sbjct: 315 REDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 360 ------KDDLS--------AHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVAL 404
K+ LS A NG G E L +FS + G +P Y FS + C+ L A
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 405 EQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGF 464
G+Q HA LK GF S + G AL+ MY KCG +E A +VF M +SW ++I
Sbjct: 434 CNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAAL 493
Query: 465 ANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
H +A+ ++E+ML G+RP+++T + L ACS+AG+V + YF+ M+ Y+I P
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 525 MDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLL 584
DHY LID+ R G +A I+ + F+P IW ++GCR HGNMELG AA++L
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF 613
Query: 585 KLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPND 644
L P+ +Y +L ++ + G+WE+VA V+ L R+ + + SWI ++ +V++F +D
Sbjct: 614 GLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDD 673
Query: 645 GLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS------VYHSEKLAIAFGLL 698
HP++ ++ L +L ++ + GY SF L D ES HSEK+A+AFGL+
Sbjct: 674 TSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLM 733
Query: 699 NTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
P + I + K+ C DCHNF + ++ + R+II+RD KR H F NG C+C +F
Sbjct: 734 KLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNF 789
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 206/511 (40%), Gaps = 105/511 (20%)
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
A Y N+ L L S ++L + +H ++ + + + N L +Y LN
Sbjct: 12 ANRYAANLRLCLPLRRTS----LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNY 67
Query: 229 AIKAFNRIREKNVMSWTTVI-GACG--------------------------------ENG 255
A + F+ I E + ++ TT++ G C N
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML---SLRVGAQVHSLGIKLGYASNLR 312
+ + F KM EG +P+ FT S+ + G L + Q H+ +K G
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASV--LAGLALVADDEKQCVQFHAAALKSGAGYITS 185
Query: 313 VRNSIMYLYLKCG----LVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLAK------ 360
V N+++ +Y KC L+ A+K+FD + + +W M+ G+ + DL +
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 361 DD---LSAHNG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG 407
DD L A+N EAL + ++ SSG++ D +T+ S++ C+ L+ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 408 EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS-------- 459
+Q+HA L+ S +LV++Y KCG+ + A +F +M + L+SW +
Sbjct: 306 KQVHAYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSS 364
Query: 460 -----------------------MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
MI+G A + + L+LF M G P F GA+
Sbjct: 365 GHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP- 555
+C+ G Y + K + LI M+ + G +EEA + M P
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTM---PC 480
Query: 556 -NEVIWSVFIAGCRRHGNMELGFYAAEQLLK 585
+ V W+ IA +HG+ E++LK
Sbjct: 481 LDSVSWNALIAALGQHGHGAEAVDVYEEMLK 511
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 197/463 (42%), Gaps = 91/463 (19%)
Query: 43 KLIQLNGNSEPVRSLGF-QEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIH 97
KL+ N + GF QEAL ++ + G ++ +Y S+++ C L + +H
Sbjct: 250 KLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVH 309
Query: 98 AHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYV------ 151
A++++ F LV++Y KCG +EA+ +F+ +P ++VSW +L+SGYV
Sbjct: 310 AYVLRREDFS-FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIG 368
Query: 152 -------------------------QNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+N E + +F M G P + A+ +C+
Sbjct: 369 EAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTT 246
L + G+Q HA ++K + S GN+L ++Y+ CG + A + F + + +SW
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNA 488
Query: 247 VIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
+I A G++G + + + +ML +GI+P+ TL ++ + C
Sbjct: 489 LIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS------------------- 529
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
GLVD+ +K FD M V + A +A+++DL L
Sbjct: 530 ----------------HAGLVDQGRKYFDSMETVYRIPPGA--DHYARLIDL----LCRS 567
Query: 367 NGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
++A S+ L KP + ++L+ C +E G I A G + + G
Sbjct: 568 GKFSDAESVIESLP---FKPTAEIWEALLSGCRVHGNMELG--IIAADKLFGLIPE-HDG 621
Query: 427 TALV--NMYKKCGRIERASRVFVEMSTRTL-----ISWTSMIT 462
T ++ NM+ G+ E +RV M R + SW M T
Sbjct: 622 TYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 42 SKLIQLNGNSEPVRSLGF-QEALSVLT----EGPKVQTSSYVSLLQECVNRKSLSNAEII 96
S +I ++G +E GF +E L + + EG + ++ ++ C + N +
Sbjct: 384 SWMIMISGLAEN----GFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA ++K G L+ +Y KCG +EEA++VF +P ++ VSW +LI+ Q+
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQ 196
A+ V+ +ML+ G P +TL T LTACS + G++
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/697 (32%), Positives = 380/697 (54%), Gaps = 28/697 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSN-AEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
Q + VS+L+ C RK LS+ +H +++K+GS + +L+++Y KC A KV
Sbjct: 5 QRQNLVSILRVC-TRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKV 63
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FD++P NVVSW++L+SG+V N + ++ +F +M G YP T T L AC L ++
Sbjct: 64 FDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNAL 123
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QIH + +K E VGNSL +YS CG +N A K F RI +++++SW +I
Sbjct: 124 EKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGF 183
Query: 252 GENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY-- 307
G + L F M I+ P+EFTLTS+ C + + G Q+H ++ G+
Sbjct: 184 VHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHC 243
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
S+ + S++ LY+KCG + A+K FD + +++W+++I G+AQ +
Sbjct: 244 PSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEF--------- 294
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
EA+ +F +L + D + SSI+ + + L QG+Q+ AL +K + V
Sbjct: 295 --VEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLN 352
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRP 487
++V+MY KCG ++ A + F EM + +ISWT +ITG+ H L +++++F +ML + P
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP 412
Query: 488 NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDF 547
++V ++ L+ACS++GM+ E F + + + IKP ++HY C++D+ R G ++EA
Sbjct: 413 DEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHL 472
Query: 548 IKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRW 607
I M +PN IW ++ CR HG++ELG + LL++ K+ +Y M+ +++ AG W
Sbjct: 473 IDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYW 532
Query: 608 EDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK-- 665
+ + L + L + SW+ I+ +V+ F+ + HP + I + L E + +
Sbjct: 533 NEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREE 592
Query: 666 ---CFGYKQQESFELTDE--ESASVYHSEKLAIAFGLLNTPIVSP---ILVVKSTTMCRD 717
+G K E ++ DE E HSEKLAI L + I V K+ +C D
Sbjct: 593 LGYVYGLK-HELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVD 651
Query: 718 CHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
CH FIK ++ +T +VRD+ R H F +G C+C D+
Sbjct: 652 CHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 688
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/719 (32%), Positives = 389/719 (54%), Gaps = 27/719 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
L ++ G ++ L C ++ N IH IVK G +D FV LV+ Y +C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTA 181
G ++ A+KVFD + NVVSWTS+I GY + + A+ +F M+ P +VT+
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
++AC+ LE + G++++A++ E + + ++L +Y C +++ A + F+ N+
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+ G + L F+ M+ G++P+ ++ S S C + ++ G H
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ--MMDLA 359
++ G+ S + N+++ +Y+KC D A ++FD MS+ +VTWN+++AG+ + +D A
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAA 422
Query: 360 KDD---------------LSAHNGGT---EALSIFSKLNSS-GMKPDLYTFSSILTICSR 400
+ +S G+ EA+ +F + S G+ D T SI + C
Sbjct: 423 WETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGH 482
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
L AL+ + I+ K G DV +GT LV+M+ +CG E A +F ++ R + +WT+
Sbjct: 483 LGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAA 542
Query: 461 ITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYK 520
I A + +A++LF+DM+ G++P+ V FVGAL ACS+ G+V + F M K +
Sbjct: 543 IGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHG 602
Query: 521 IKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAA 580
+ P HY C++D+ R G +EEA I+ M EPN+VIW+ +A CR GN+E+ YAA
Sbjct: 603 VSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAA 662
Query: 581 EQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSF 640
E++ L P+ SY +L +++ SAGRW D+A V+ +E+ L + S I+I+ K + F
Sbjct: 663 EKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEF 722
Query: 641 KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASVY----HSEKLAIAF 695
D HP+ I +LDE+ ++A G+ S L D +E ++ HSEKLA+A+
Sbjct: 723 TSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAY 782
Query: 696 GLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
GL+++ + I +VK+ +C DCH+F K + + REII+RD+ R H G C+C DF
Sbjct: 783 GLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 165/622 (26%), Positives = 278/622 (44%), Gaps = 93/622 (14%)
Query: 74 TSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE---AQK 130
T + S L+ C K++ ++ H + K G D +T LV + G E A++
Sbjct: 32 TKATPSSLKNC---KTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKE 88
Query: 131 VFDNLPRINVV-SWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
VF+N + SLI GY + AI +FL M+ +G P T L+AC+
Sbjct: 89 VFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR 148
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ G QIH +VK D V NSL Y+ CG L+SA K F+ + E+NV+SWT++I
Sbjct: 149 AKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMIC 208
Query: 250 ACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
A + F +M+ E + PN T+ + S C + L G +V++ G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
N + ++++ +Y+KC +D A++LFD NL NAM + + + G
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVR------------QG 316
Query: 369 GT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGT 427
T EAL +F+ + SG++PD + S ++ CS+L + G+ H L+ GF S +
Sbjct: 317 LTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICN 376
Query: 428 ALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANH-------------------- 467
AL++MY KC R + A R+F MS +T+++W S++ G+ +
Sbjct: 377 ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 468 -----------SLSHQALQLFEDML-LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SL +A+++F M GV + VT + +AC + G + A + +
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEA------------------------------- 544
+K I+ + L+DMF R G E A
Sbjct: 497 EKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERA 555
Query: 545 ---FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLL 598
FD + + +P+ V + + C G ++ G FY+ +L + P+D Y ++
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH-YGCMV 614
Query: 599 DIFVSAGRWED-VAVVKNLTRE 619
D+ AG E+ V +++++ E
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPME 636
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 153/339 (45%), Gaps = 38/339 (11%)
Query: 51 SEPVRSLGFQEALSV----LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSH 106
S VR +EAL V + G + S +S + C +++ + H ++++ G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ----------- 155
+ L+++Y KC + A ++FD + VV+W S+++GYV+N +
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 156 PEL--------------------AIHVFLDML-EAGNYPTNVTLGTALTACSSLESIRLG 194
PE AI VF M + G VT+ + +AC L ++ L
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
K I+ Y+ K + D +G +L ++S CG SA+ FN + ++V +WT IGA
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G A + + F M+ +G++P+ + C ++ G ++ +KL S V
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 315 NSIMYLYL-KCGLVDEAQKLFDGMS-HVNLVTWNAMIAG 351
M L + GL++EA +L + M N V WN+++A
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAA 648
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 14/223 (6%)
Query: 59 FQEALSVL-----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+EA+ V EG + +S+ C + +L A+ I+ +I K G D + T
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
LV+++ +CG+ E A +F++L +V +WT+ I E AI +F DM+E G P
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKP 569
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQ--TEDDTSVGNSLCSLYSTCGSLNSAIK 231
V ALTACS ++ GK+I ++K + +D G + L G L A++
Sbjct: 570 DGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYG-CMVDLLGRAGLLEEAVQ 628
Query: 232 AFNRI-REKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
+ E N + W +++ AC VQG + +E IQ
Sbjct: 629 LIEDMPMEPNDVIWNSLLAAC-----RVQGNVEMAAYAAEKIQ 666
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/696 (32%), Positives = 374/696 (53%), Gaps = 14/696 (2%)
Query: 72 VQTSSY--VSLLQECVN---RKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
V+ SS+ VS++ C N + L + +HA+ ++ G F + T LV +YGK G +
Sbjct: 195 VEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLA 253
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
++ + + ++V+W +++S QN Q A+ +M+ G P T+ + L ACS
Sbjct: 254 SSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACS 313
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTS-VGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWT 245
LE +R GK++HAY +K + D+ S VG++L +Y C + S + F+ + ++ + W
Sbjct: 314 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 373
Query: 246 TVIGACGENGEAVQGLRFFSKML-SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+I +N + L F M S G+ N T+ + C + +H +K
Sbjct: 374 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 433
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
G + V+N++M +Y + G +D A ++F M +LVTWN MI G+ L
Sbjct: 434 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 493
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
H + + +KP+ T +IL C+ L AL +G++IHA +K +DV
Sbjct: 494 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 553
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
VG+ALV+MY KCG ++ + +VF ++ + +I+W +I + H +A+ L M++ G
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 613
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
V+PN+VTF+ AACS++GMV E L F +M+ +Y ++P DHY C++D+ R G I+EA
Sbjct: 614 VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEA 673
Query: 545 FDFIKKMDFEPNEV-IWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
+ + M + N+ WS + R H N+E+G AA+ L++L+P Y +L +I+ S
Sbjct: 674 YQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSS 733
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AG W+ V+ +E+ + + SWI D+V+ F D HPQS ++ L+ L E+
Sbjct: 734 AGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWER 793
Query: 664 AKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
+ GY S E ++E HSEKLAIAFG+LNT + I V K+ +C DC
Sbjct: 794 MRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDC 853
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H K I+ + REII+RD +R H+F NG C+C D+
Sbjct: 854 HLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 185/686 (26%), Positives = 325/686 (47%), Gaps = 91/686 (13%)
Query: 16 TKSRQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEP----------VRSLGFQEAL-- 63
++ + P AT V+ SG+ I ++ + P VRS +EA+
Sbjct: 25 SRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREAVLT 84
Query: 64 --SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD-FFVMTFLVNVYG 120
++ G K ++ +LL+ + + + + IHAH+ K G D V LVN+Y
Sbjct: 85 YVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYR 144
Query: 121 KCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
KCG+ KVFD + N VSW SLIS + E+A+ F ML+ P++ TL +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 181 ALTACSSL---ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+TACS+L E + +GKQ+HAY ++ + E ++ + N+L ++Y G L S+
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLR-KGELNSFIINTLVAMYGKLGKLASSKVLLGSFG 263
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
+++++W TV+ + +N + ++ L + +M+ EG++P+EFT++S+ C + LR G +
Sbjct: 264 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 323
Query: 298 VHSLGIKLG-YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
+H+ +K G N V ++++ +Y C V +++FDGM + WNAMIAG++Q
Sbjct: 324 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQ-- 381
Query: 357 DLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTL 415
+ H+ EAL +F + S+G+ + T + ++ C R A + E IH +
Sbjct: 382 -------NEHD--KEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 416 KTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQ 475
K G D V L++MY + G+I+ A R+F +M R L++W +MITG+ AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 476 LFEDML-----------LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPV 524
L M ++PN +T + L +C+ AL + + Y IK
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA----ALSALAKGKEIHA-YAIKNN 547
Query: 525 MDHYM----CLIDMFVRLGCI-------------------------------EEAFDFIK 549
+ + L+DM+ + GC+ +EA D ++
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 550 KM---DFEPNEVIWSVFIAGCRRHGNMELG---FYAAEQLLKLKPKDCESYAMLLDIFVS 603
M +PNEV + A C G ++ G FY + ++P + YA ++D+
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS-DHYACVVDLLGR 666
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWS 629
AGR ++ + N+ + ++ WS
Sbjct: 667 AGRIKEAYQLMNMMPRD-FNKAGAWS 691
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/696 (32%), Positives = 382/696 (54%), Gaps = 27/696 (3%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G K T +Y +++ SL + IHA ++K G D +V L+++Y K G +A
Sbjct: 125 GVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDA 184
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
+KVF+ +P ++VSW S+ISGY+ ++ +F +ML+ G P + +AL ACS +
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 189 ESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
S ++GK+IH + V+ + E D V S+ +YS G ++ A + FN + ++N+++W +
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 248 IGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
IG NG F KM + G+QP+ +TSI+ + + ++ G +H ++ G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPD--VITSINLLPAS--AILEGRTIHGYAMRRG 360
Query: 307 YASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAH 366
+ ++ + +++ +Y +CG + A+ +FD M+ N+++WN++IA + Q
Sbjct: 361 FLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ------------ 408
Query: 367 NGGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVV 425
NG AL +F +L S + PD T +SIL + ++L +G +IHA +K+ + S+ ++
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 426 GTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV 485
+LV+MY CG +E A + F + + ++SW S+I +A H ++ LF +M+ + V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 486 RPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAF 545
PN+ TF LAACS +GMV E YFE M++EY I P ++HY C++D+ R G A
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 546 DFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
F+++M F P IW + R H ++ + +AAEQ+ K++ + Y +LL+++ AG
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK-- 663
RWEDV +K L + +S T S + K K + F D H + +I++VLD +
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVG 708
Query: 664 -----AKCFGYKQQESFELTDEESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
C + E+ + ++ HS +LA FGL++T + V +T +CR C
Sbjct: 709 EEDIYVHCVSRLRPETL-VKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKC 767
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
H F++ + LT REI+V DSK H F NG C+C ++
Sbjct: 768 HEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNY 803
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/377 (29%), Positives = 196/377 (51%), Gaps = 19/377 (5%)
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
ME+A ++FD + + + W +I G+ A+ + M+ AG T + +
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
+ + S+ GK+IHA V+K D V NSL SLY G A K F + E++++SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
++I G+ L F +ML G +P+ F+ S C + S ++G ++H ++
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 305 LGYAS-NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDL 363
+ ++ V SI+ +Y K G V A+++F+GM N+V WN MI +A+
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYAR--------- 310
Query: 364 SAHNGG-TEALSIFSKLN-SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
NG T+A F K++ +G++PD+ T ++L A+ +G IH ++ GFL
Sbjct: 311 ---NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS----AILEGRTIHGYAMRRGFLP 363
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V+ TAL++MY +CG+++ A +F M+ + +ISW S+I + + ++ AL+LF+++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 482 LAGVRPNQVTFVGALAA 498
+ + P+ T L A
Sbjct: 424 DSSLVPDSTTIASILPA 440
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 31/292 (10%)
Query: 326 LVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMK 385
L+++A +LFD M+ + WN MI G ++ EA+ +S++ +G+K
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKG-----------FTSCGLYIEAVQFYSRMVFAGVK 127
Query: 386 PDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRV 445
D +T+ ++ + + +LE+G++IHA+ +K GF+SDV V +L+++Y K G A +V
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 446 FVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMV 505
F EM R ++SW SMI+G+ +L LF++ML G +P++ + + AL ACS+
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV--- 244
Query: 506 YEALGYFEMMQKEYKIKPVMDH--------YMCLIDMFVRLGCIEEAFDFIKKMDFEPNE 557
Y M KE V ++DM+ + G + A M + N
Sbjct: 245 -----YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNI 298
Query: 558 VIWSVFIAGCRRHGNMELGFYAAEQLLK---LKPKDCESYAMLLDIFVSAGR 606
V W+V I R+G + F +++ + L+P S +L + GR
Sbjct: 299 VAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR 350
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/685 (33%), Positives = 366/685 (53%), Gaps = 22/685 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSH---QDFFVMTFLVNVYGKCGNMEEAQKVFDNLP 136
LL+ C N L E IHAH++ T +D + + L+N+Y KC A+K+FD +P
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 137 RINVVSWTSLISGYVQNSQPELAI-HVFLDMLEAG-NYPTNVTLGTALTACSSLESIRLG 194
NVVSW +++ GY QNS + + +F M +G + P +CS+ I G
Sbjct: 97 ERNVVSWCAMMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 195 KQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGEN 254
KQ H +KY V N+L +YS C AI+ + + ++ +++ + E
Sbjct: 156 KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLEC 215
Query: 255 GEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVR 314
G +GL K +E N T S + + L + QVHS ++ G+ + +
Sbjct: 216 GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEAC 275
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
+++ +Y KCG V AQ++FD +H + N I MD D S EAL+
Sbjct: 276 GALINMYGKCGKVLYAQRVFDD-THAQNIFLNTTI------MDAYFQDKSFE----EALN 324
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYK 434
+FSK+++ + P+ YTF+ +L + L L+QG+ +H L LK+G+ + V+VG ALVNMY
Sbjct: 325 LFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 435 KCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVG 494
K G IE A + F M+ R +++W +MI+G ++H L +AL+ F+ M+ G PN++TF+G
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 495 ALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFE 554
L ACS+ G V + L YF + K++ ++P + HY C++ + + G ++A DF++ E
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 555 PNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVK 614
+ V W + C N LG AE ++ P D Y +L +I + WE VA V+
Sbjct: 505 WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVR 564
Query: 615 NLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQ-- 672
+L + + SWI I+++ + F D HP+ I+ + E++ K K GY
Sbjct: 565 SLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVA 624
Query: 673 ESFELTDEESAS---VYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLT 729
+F DEE YHSEKLA+A+GL+ TP SP+ V K+ +C DCH+ IK+I+ ++
Sbjct: 625 GAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKIS 684
Query: 730 AREIIVRDSKRLHKFVNGHCTCRDF 754
R I++RDS R H F++G C+C D+
Sbjct: 685 KRYIVIRDSNRFHHFLDGQCSCCDY 709
Score = 152 bits (384), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 191/402 (47%), Gaps = 25/402 (6%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVV---KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFN 234
L L C++ +R+G+ IHA+++ + +D NSL +LY C A K F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 235 RIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTSISSVCGTMLSLR 293
+ E+NV+SW ++ +G + L+ F M G +PNEF T + C +
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 294 VGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHA 353
G Q H +K G S+ VRN+++Y+Y C EA ++ D + + +L +++ ++G+
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 354 QMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
+ E L + K + + T+ S L + S L L Q+H+
Sbjct: 214 EC-----------GAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSR 262
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
++ GF ++V AL+NMY KCG++ A RVF + + + T+++ + +A
Sbjct: 263 MVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEA 322
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEA-LGYFEMMQKEYKIKPVMDHYM--- 529
L LF M V PN+ TF L + + ++ + L + +++ Y+ +H M
Sbjct: 323 LNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR-----NHVMVGN 377
Query: 530 CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
L++M+ + G IE+A M F + V W+ I+GC HG
Sbjct: 378 ALVNMYAKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHG 418
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 58 GFQEALSVL----TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
F+E L VL E +Y+S L+ N + L+ A +H+ +V+ G + +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
L+N+YGKCG + AQ+VFD+ N+ T+++ Y Q+ E A+++F M P
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
T L + + L ++ G +H V+K + VGN+L ++Y+ GS+ A KAF
Sbjct: 337 NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAF 396
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ + +++++W T+I C +G + L F +M+ G PN T + C + +
Sbjct: 397 SGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVE 456
Query: 294 VGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMS-HVNLVTWNAMI 349
G + L K +++ I+ L K G+ +A+ ++V W ++
Sbjct: 457 QGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLL 514
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 238/724 (32%), Positives = 386/724 (53%), Gaps = 55/724 (7%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN---VYGKCGNMEEA 128
++ +SLL C K+L + IIHA ++K G H + ++ L+ + + A
Sbjct: 31 IRNHPSLSLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYA 87
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + N++ W ++ G+ +S P A+ +++ M+ G P + T L +C+
Sbjct: 88 ISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKS 147
Query: 189 ESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR------------- 235
++ + G+QIH +V+K + D V SL S+Y G L A K F++
Sbjct: 148 KAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALI 207
Query: 236 ------------------IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEF 277
I K+V+SW +I E G + L F M+ ++P+E
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 278 TLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGM 337
T+ ++ S C S+ +G QVH G+ SNL++ N+++ LY KCG ++ A LF+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 338 SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTI 397
+ ++++WN +I G+ M N EAL +F ++ SG P+ T SIL
Sbjct: 328 PYKDVISWNTLIGGYTHM-----------NLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 398 CSRLVALEQGEQIHALTLK--TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
C+ L A++ G IH K G + + T+L++MY KCG IE A +VF + ++L
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
SW +MI GFA H + + LF M G++P+ +TFVG L+ACS++GM+ F M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
++YK+ P ++HY C+ID+ G +EA + I M+ EP+ VIW + C+ HGN+EL
Sbjct: 497 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVEL 556
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
G AE L+K++P++ SY +L +I+ SAGRW +VA + L ++ + + S I I
Sbjct: 557 GESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDE---LVEKAKCFGYKQQESFELTDE--ESASVYHSEK 690
V+ F D HP++ EI+ +L+E L+EKA + E+ +E E A +HSEK
Sbjct: 617 VVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEK 676
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LAIAFGL++T + + +VK+ +CR+CH K+I+ + REII RD R H F +G C+
Sbjct: 677 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 736
Query: 751 CRDF 754
C D+
Sbjct: 737 CNDY 740
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 48/354 (13%)
Query: 59 FQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNV 118
++A V + P SY +L++ +R
Sbjct: 185 LEDAHKVFDKSPHRDVVSYTALIKGYASR------------------------------- 213
Query: 119 YGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTL 178
G +E AQK+FD +P +VVSW ++ISGY + + A+ +F DM++ P T+
Sbjct: 214 ----GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 179 GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIRE 238
T ++AC+ SI LG+Q+H ++ + + + N+L LYS CG L +A F R+
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 239 KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
K+V+SW T+IG + L F +ML G PN+ T+ SI C + ++ +G +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 299 HSLGIKL--GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
H K G + +R S++ +Y KCG ++ A ++F+ + H +L +WNAMI G A
Sbjct: 390 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM-- 447
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
H + +FS++ G++PD TF +L+ CS L+ G I
Sbjct: 448 ---------HGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/695 (32%), Positives = 379/695 (54%), Gaps = 23/695 (3%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEI---IHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
EG ++ + S L+ V SL AEI +H+ IVK G + FV L+N Y CG+
Sbjct: 140 EGHELNPHVFTSFLKLFV---SLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGS 196
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
++ A+ VF+ + ++V W ++S YV+N E ++ + M AG P N T TAL A
Sbjct: 197 VDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
L + K +H ++K D VG L LY+ G ++ A K FN + + +V+ W
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
+ +I +NG + + F +M + PNEFTL+SI + C +G Q+H L +K
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK 376
Query: 305 LGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+G+ ++ V N+++ +Y KC +D A KLF +S N V+WN +I G+ + +
Sbjct: 377 VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE------- 429
Query: 365 AHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
G +A S+F + + + TFSS L C+ L +++ G Q+H L +KT V
Sbjct: 430 ----GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
V +L++MY KCG I+ A VF EM T + SW ++I+G++ H L QAL++ + M
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
+PN +TF+G L+ CSNAG++ + FE M +++ I+P ++HY C++ + R G +++A
Sbjct: 546 CKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKA 605
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSA 604
I+ + +EP+ +IW ++ N E +AE++LK+ PKD +Y ++ +++ A
Sbjct: 606 MKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGA 665
Query: 605 GRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKA 664
+W +VA ++ +E + + SWI + V+ F HP I +L+ L KA
Sbjct: 666 KQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKA 725
Query: 665 KCFGYKQQES---FELTDEESASVY--HSEKLAIAFGLLNTPIV-SPILVVKSTTMCRDC 718
GY + ++ DEE HSE+LA+A+GL+ P + IL++K+ +C DC
Sbjct: 726 TRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDC 785
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRD 753
H+ +K+I+S+ R++++RD R H F G C+C D
Sbjct: 786 HSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGD 820
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 149/524 (28%), Positives = 252/524 (48%), Gaps = 22/524 (4%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P + + +Y ++L+ C+ + +A+ IH I+K GS D F L+N Y K G ++A
Sbjct: 45 PGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL 104
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+FD +P N VS+ +L GY I ++ + G+ + L SL+
Sbjct: 105 NLFDEMPERNNVSFVTLAQGYACQD----PIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+ +H+ +VK + + VG +L + YS CGS++SA F I K+++ W ++
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
ENG L+ S M G PN +T + + + VH +K Y
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG- 368
+ RV ++ LY + G + +A K+F+ M ++V W+ MIA Q NG
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ------------NGF 328
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
EA+ +F ++ + + P+ +T SSIL C+ GEQ+H L +K GF D+ V A
Sbjct: 329 CNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNA 388
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+++Y KC +++ A ++F E+S++ +SW ++I G+ N +A +F + L V
Sbjct: 389 LIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT 448
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
+VTF AL AC++ + + + K K V LIDM+ + G I+ A
Sbjct: 449 EVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSN-SLIDMYAKCGDIKFAQSVF 507
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCE 592
+M+ + W+ I+G HG LG A L +K +DC+
Sbjct: 508 NEME-TIDVASWNALISGYSTHG---LGRQALRILDIMKDRDCK 547
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/578 (35%), Positives = 334/578 (57%), Gaps = 16/578 (2%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L C+ ++ K H +++ E D ++ N L + YS CG + A + F+ + E+++
Sbjct: 68 LQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSL 127
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SW T+IG N + L F +M +EG + +EFT++S+ S CG ++H L
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCL 187
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K NL V +++ LY KCG++ +A ++F+ M + VTW++M+AG+ Q
Sbjct: 188 SVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQ------- 240
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL ++ + ++ + +T SS++ CS L AL +G+Q+HA+ K+GF S
Sbjct: 241 ----NKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+V V ++ V+MY KCG + + +F E+ + L W ++I+GFA H+ + + LFE M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G+ PN+VTF L+ C + G+V E +F++M+ Y + P + HY C++D+ R G +
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
EA++ IK + F+P IW +A CR + N+EL AAE+L +L+P++ ++ +L +I+
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIY 476
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
+ +WE++A + L R+ + + SWI IKDKV++F + HP+ EI LD LV
Sbjct: 477 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 536
Query: 662 EKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCR 716
K + FGYK EL D +E + HSEKLA+ FGL+ P SP+ ++K+ +C
Sbjct: 537 IKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICV 596
Query: 717 DCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
DCH F+K + T R IIVRD R H F +GHC+C DF
Sbjct: 597 DCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDF 634
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 189/364 (51%), Gaps = 12/364 (3%)
Query: 80 LLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRIN 139
+LQ C ++ A+ H I++ D ++ L+N Y KCG +E A++VFD + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 140 VVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHA 199
+VSW ++I Y +N A+ +FL+M G + T+ + L+AC K++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 200 YVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQ 259
VK + + VG +L LY+ CG + A++ F +++K+ ++W++++ +N +
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 260 GLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY 319
L + + ++ N+FTL+S+ C + +L G Q+H++ K G+ SN+ V +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 320 LYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL 379
+Y KCG + E+ +F + NL WN +I+G A+ H E + +F K+
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAK-----------HARPKEVMILFEKM 355
Query: 380 NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGTALVNMYKKCGR 438
GM P+ TFSS+L++C +E+G + L T G +VV + +V++ + G
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 439 IERA 442
+ A
Sbjct: 416 LSEA 419
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 166/326 (50%), Gaps = 20/326 (6%)
Query: 63 LSVLTEGPKVQTSSYVSLLQEC-VNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
L + EG K + S+L C VN +L + +H VKT + +V T L+++Y K
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALE-CKKLHCLSVKTCIDLNLYVGTALLDLYAK 209
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
CG +++A +VF+++ + V+W+S+++GYVQN E A+ ++ TL +
Sbjct: 210 CGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSV 269
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
+ ACS+L ++ GKQ+HA + K + V +S +Y+ CGSL + F+ ++EKN+
Sbjct: 270 ICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNL 329
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
W T+I ++ + + F KM +G+ PNE T +S+ SVCG + G + L
Sbjct: 330 ELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 302 -GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL-----FDGMSHVNLVTWNAMIAG---- 351
G + N+ + ++ + + GL+ EA +L FD + + W +++A
Sbjct: 390 MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI----WGSLLASCRVY 445
Query: 352 -HAQMMDLAKD---DLSAHNGGTEAL 373
+ ++ ++A + +L N G L
Sbjct: 446 KNLELAEVAAEKLFELEPENAGNHVL 471
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 152/308 (49%), Gaps = 17/308 (5%)
Query: 268 LSEGIQPNEFT----LTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
+S G NEF+ + I +C ++ H I++ ++ + N ++ Y K
Sbjct: 49 VSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSK 108
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG 383
CG V+ A+++FDGM +LV+WN MI + + + +EAL IF ++ + G
Sbjct: 109 CGFVELARQVFDGMLERSLVSWNTMIGLYTR-----------NRMESEALDIFLEMRNEG 157
Query: 384 MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERAS 443
K +T SS+L+ C + +++H L++KT ++ VGTAL+++Y KCG I+ A
Sbjct: 158 FKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAV 217
Query: 444 RVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAG 503
+VF M ++ ++W+SM+ G+ + +AL L+ + NQ T + ACSN
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 504 MVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVF 563
+ E ++ K V +DM+ + G + E++ ++ E N +W+
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSA-VDMYAKCGSLRESYIIFSEVQ-EKNLELWNTI 335
Query: 564 IAGCRRHG 571
I+G +H
Sbjct: 336 ISGFAKHA 343
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 373 LSIFSKLNSSGMKPDLYT--FSS------ILTICSRLVALEQGEQIHALTLKTGFLSDVV 424
+S+ + + + P Y+ FS+ IL +C+R A+ + + H ++ DV
Sbjct: 38 ISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVT 97
Query: 425 VGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG 484
+ L+N Y KCG +E A +VF M R+L+SW +MI + + + +AL +F +M G
Sbjct: 98 LLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEG 157
Query: 485 VRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIE 542
+ ++ T L+AC G+ +AL ++ K ++ Y+ L+D++ + G I+
Sbjct: 158 FKFSEFTISSVLSAC---GVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 543 EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLK 587
+A + M + + V WS +AG ++ N E L Y Q + L+
Sbjct: 215 DAVQVFESMQ-DKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/710 (32%), Positives = 389/710 (54%), Gaps = 24/710 (3%)
Query: 53 PVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVM 112
P S+ Q L +T T ++ LL++C++ +S+S + I AH++K+G +
Sbjct: 44 PESSINNQFRLLCITCDTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SG 102
Query: 113 TFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY 172
+ LV+ KCG+++ A++VFD + ++V+W SLI+ +++ + + A+ ++ M+
Sbjct: 103 SKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVL 162
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGSLNSAIK 231
P TL + A S L + ++ H V E + VG++L +Y G A
Sbjct: 163 PDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKL 222
Query: 232 AFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
+R+ EK+V+ T +I + GE + ++ F ML E +QPNE+T S+ CG +
Sbjct: 223 VLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKD 282
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G +H L +K G+ S L + S++ +YL+C LVD++ ++F + + N V+W ++I+G
Sbjct: 283 IGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISG 342
Query: 352 HAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
Q NG E AL F K+ +KP+ +T SS L CS L E+G QI
Sbjct: 343 LVQ------------NGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H + K GF D G+ L+++Y KCG + A VF +S +IS +MI +A +
Sbjct: 391 HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFG 450
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
+AL LFE M+ G++PN VT + L AC+N+ +V E F+ +K+ KI DHY C
Sbjct: 451 REALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYAC 509
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G +EEA + + P+ V+W ++ C+ H +E+ ++L+++P D
Sbjct: 510 MVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGD 568
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGL-HPQ 649
+ ++ +++ S G+W V +K+ ++ KL + SW+ I + ++F D HP
Sbjct: 569 EGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPN 628
Query: 650 SAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIAFGLLNTPIVS 704
S +I + L+EL++K+K GY + +S E T +E + HSEKLAIAF + +
Sbjct: 629 SEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWRN-VGG 687
Query: 705 PILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I ++K+ +C DCH++IKI++ + REII RDSKR H F +G C+C D+
Sbjct: 688 SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDY 737
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 398 bits (1023), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/636 (34%), Positives = 355/636 (55%), Gaps = 29/636 (4%)
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLG 194
+ + +V SW S+I+ ++ A+ F M + YPT + A+ ACSSL I G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 195 KQIH--AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACG 252
KQ H A+V YQ+ D V ++L +YSTCG L A K F+ I ++N++SWT++I
Sbjct: 96 KQTHQQAFVFGYQS--DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYD 153
Query: 253 ENGEAVQGLRFFSKML------SEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLG 306
NG A+ + F +L + + + L S+ S C + + + +HS IK G
Sbjct: 154 LNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG 213
Query: 307 YASNLRVRNSIMYLYLKCGL--VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLS 364
+ + V N+++ Y K G V A+K+FD + + V++N++++ +AQ
Sbjct: 214 FDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQ---------- 263
Query: 365 AHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDV 423
EA +F +L + + + T S++L S AL G+ IH ++ G DV
Sbjct: 264 -SGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 424 VVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLA 483
+VGT++++MY KCGR+E A + F M + + SWT+MI G+ H + +AL+LF M+ +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 484 GVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEE 543
GVRPN +TFV LAACS+AG+ E +F M+ + ++P ++HY C++D+ R G +++
Sbjct: 383 GVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQK 442
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVS 603
A+D I++M +P+ +IWS +A CR H N+EL + +L +L +C Y +L I+
Sbjct: 443 AYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYAD 502
Query: 604 AGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEK 663
AGRW+DV V+ + + L + +S + + +V+ F D HPQ +I++ L EL K
Sbjct: 503 AGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRK 562
Query: 664 AKCFGYKQQES--FELTDEESASV---YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDC 718
GY S DEE + HSEKLAIAFG++NT S + VVK+ +C DC
Sbjct: 563 LLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDC 622
Query: 719 HNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
HN IK+I+ + RE +VRD+KR H F +G C+C D+
Sbjct: 623 HNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDY 658
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 229/469 (48%), Gaps = 31/469 (6%)
Query: 14 LETKSRQPSSSLATL----KDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEG 69
L T+ +L TL DK S+ + L + ++E + + LS+
Sbjct: 17 LHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYP-- 74
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
SS+ ++ C + + + + H G D FV + L+ +Y CG +E+A+
Sbjct: 75 ---TRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDAR 131
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN------YPTNVTLGTALT 183
KVFD +P+ N+VSWTS+I GY N A+ +F D+L N + ++ L + ++
Sbjct: 132 KVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVIS 191
Query: 184 ACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI--KAFNRIREKNV 241
ACS + + L + IH++V+K + SVGN+L Y+ G A+ K F++I +K+
Sbjct: 192 ACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQP-NEFTLTSISSVCGTMLSLRVGAQVHS 300
+S+ +++ ++G + + F +++ + N TL+++ +LR+G +H
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
I++G ++ V SI+ +Y KCG V+ A+K FD M + N+ +W AMIAG+
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGM------ 365
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRL-VALEQGEQIHALTLKTGF 419
H +AL +F + SG++P+ TF S+L CS + +E +A+ + G
Sbjct: 366 -----HGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGV 420
Query: 420 LSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT-LISWTSMITGFANH 467
+ +V++ + G +++A + M + I W+S++ H
Sbjct: 421 EPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 42/372 (11%)
Query: 233 FNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLS 291
FNR +K +V SW +VI +G++ + L FS M + P + C ++
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 292 LRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAG 351
+ G Q H GY S++ V ++++ +Y CG +++A+K+FD + N+V+W +MI G
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRG 151
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKL------NSSGMKPDLYTFSSILTICSRLVALE 405
+ DL+ + +A+S+F L + M D S+++ CSR+ A
Sbjct: 152 Y---------DLNGN--ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 406 QGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR--IERASRVFVEMSTRTLISWTSMITG 463
E IH+ +K GF V VG L++ Y K G + A ++F ++ + +S+ S+++
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 464 FANHSLSHQALQLFEDMLLAGVRP-NQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIK 522
+A +S++A ++F ++ V N +T L A S++G AL + + +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG----ALRIGKCIHDQVIRM 316
Query: 523 PVMDHYMC---LIDMFVRLGCIE---EAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELG 576
+ D + +IDM+ + G +E +AFD +K + W+ IAG HG+
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRS----WTAMIAGYGMHGH---- 368
Query: 577 FYAAEQLLKLKP 588
A + L+L P
Sbjct: 369 ---AAKALELFP 377
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/718 (30%), Positives = 386/718 (53%), Gaps = 55/718 (7%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
+L++ KS S A+ +HA ++T S + ++++Y + EA +F L
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQS-LSHTSASIVISIYTNLKLLHEALLLFKTLKSP 68
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
V++W S+I + S A+ F++M +G P + + L +C+ + +R G+ +H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 199 AYVVKYQTEDDTSVGNSLCSLYS---------------------------------TC-- 223
++V+ + D GN+L ++Y+ TC
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 224 -GSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSI 282
++S + F + K+V+S+ T+I ++G LR +M + ++P+ FTL+S+
Sbjct: 189 PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSV 248
Query: 283 SSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNL 342
+ + + G ++H I+ G S++ + +S++ +Y K +++++++F + +
Sbjct: 249 LPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDG 308
Query: 343 VTWNAMIAGHAQMMDLAKDDLSAHNGG-TEALSIFSKLNSSGMKPDLYTFSSILTICSRL 401
++WN+++AG+ Q NG EAL +F ++ ++ +KP FSS++ C+ L
Sbjct: 309 ISWNSLVAGYVQ------------NGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 402 VALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMI 461
L G+Q+H L+ GF S++ + +ALV+MY KCG I+ A ++F M+ +SWT++I
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAII 416
Query: 462 TGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKI 521
G A H H+A+ LFE+M GV+PNQV FV L ACS+ G+V EA GYF M K Y +
Sbjct: 417 MGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGL 476
Query: 522 KPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAE 581
++HY + D+ R G +EEA++FI KM EP +WS ++ C H N+EL AE
Sbjct: 477 NQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAE 536
Query: 582 QLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFK 641
++ + ++ +Y ++ +++ S GRW+++A ++ R++ L + SWI +K+K + F
Sbjct: 537 KIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFV 596
Query: 642 PNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFEL--TDEESAS---VYHSEKLAIAFG 696
D HP +I + L ++E+ + GY S L DEE HSE+LA+AFG
Sbjct: 597 SGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFG 656
Query: 697 LLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
++NT + I V K+ +C DCH IK I+ +T REIIVRD+ R H F G+C+C D+
Sbjct: 657 IINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDY 714
Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 220/451 (48%), Gaps = 53/451 (11%)
Query: 59 FQEALSVLTE----GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTF 114
F +AL+ E G + + S+L+ C L E +H IV+ G D +
Sbjct: 86 FSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNA 145
Query: 115 LVNVYGK---------CGN---------------------------MEEAQKVFDNLPRI 138
L+N+Y K GN ++ ++VF+ +PR
Sbjct: 146 LMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRK 205
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
+VVS+ ++I+GY Q+ E A+ + +M P + TL + L S + GK+IH
Sbjct: 206 DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIH 265
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
YV++ + D +G+SL +Y+ + + + F+R+ ++ +SW +++ +NG
Sbjct: 266 GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYN 325
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ LR F +M++ ++P +S+ C + +L +G Q+H ++ G+ SN+ + ++++
Sbjct: 326 EALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALV 385
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG + A+K+FD M+ ++ V+W A+I GHA H G EA+S+F +
Sbjct: 386 DMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA-----------LHGHGHEAVSLFEE 434
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCG 437
+ G+KP+ F ++LT CS + +++ +++T G ++ A+ ++ + G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 438 RIERASRVFVEMSTRTLIS-WTSMITGFANH 467
++E A +M S W+++++ + H
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 351/669 (52%), Gaps = 93/669 (13%)
Query: 73 QTSSYVSLLQECVNRK-SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
+S + LL C+ K S +HA ++K+G + F+ L++ Y KCG++E+ ++V
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 132 FDNLPRINV-------------------------------VSWTSLISGYVQNSQPELAI 160
FD +P+ N+ +W S++SG+ Q+ + E A+
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 161 HVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLY 220
F M + G + + L+ACS L + G Q+H+ + K D +G++L +Y
Sbjct: 138 CYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMY 197
Query: 221 STCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLT 280
S CG++N A + F+ + ++NV+SW ++I +NG AV+ L F ML ++P+E TL
Sbjct: 198 SKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLA 257
Query: 281 SISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMY------LYLKCGLVDEAQKLF 334
S+ S C ++ +++VG +VH +K N ++RN I+ +Y KC + EA+ +F
Sbjct: 258 SVISACASLSAIKVGQEVHGRVVK-----NDKLRNDIILSNAFVDMYAKCSRIKEARFIF 312
Query: 335 DG-------------------------------MSHVNLVTWNAMIAGHAQMMDLAKDDL 363
D M+ N+V+WNA+IAG+ Q
Sbjct: 313 DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQ--------- 363
Query: 364 SAHNG-GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL-- 420
NG EALS+F L + P Y+F++IL C+ L L G Q H LK GF
Sbjct: 364 ---NGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 421 ----SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
D+ VG +L++MY KCG +E VF +M R +SW +MI GFA + ++AL+L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 477 FEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFV 536
F +ML +G +P+ +T +G L+AC +AG V E YF M +++ + P+ DHY C++D+
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 537 RLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAM 596
R G +EEA I++M +P+ VIW +A C+ H N+ LG Y AE+LL+++P + Y +
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVL 600
Query: 597 LLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKV 656
L +++ G+WEDV V+ R+E +++ SWI+I+ + F D HP+ +I +
Sbjct: 601 LSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSL 660
Query: 657 LDELVEKAK 665
LD L+ + +
Sbjct: 661 LDILIAEMR 669
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 213/441 (48%), Gaps = 53/441 (12%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
EG + S+ S+L C ++ +H+ I K+ D ++ + LV++Y KCGN+ +
Sbjct: 146 EGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVND 205
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VFD + NVVSW SLI+ + QN A+ VF MLE+ P VTL + ++AC+S
Sbjct: 206 AQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACAS 265
Query: 188 LESIRLGKQIHAYVVKY-QTEDDTSVGNSLCSLYSTCGSLNSA----------------- 229
L +I++G+++H VVK + +D + N+ +Y+ C + A
Sbjct: 266 LSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETS 325
Query: 230 ----------IKA----FNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
KA F ++ E+NV+SW +I +NGE + L F + E + P
Sbjct: 326 MISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPT 385
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA------SNLRVRNSIMYLYLKCGLVDE 329
++ +I C + L +G Q H +K G+ ++ V NS++ +Y+KCG V+E
Sbjct: 386 HYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEE 445
Query: 330 AQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDL 388
+F M + V+WNAMI G AQ NG G EAL +F ++ SG KPD
Sbjct: 446 GYLVFRKMMERDCVSWNAMIIGFAQ------------NGYGNEALELFREMLESGEKPDH 493
Query: 389 YTFSSILTICSRLVALEQGEQ-IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
T +L+ C +E+G ++T G T +V++ + G +E A +
Sbjct: 494 ITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIE 553
Query: 448 EMSTRT-LISWTSMITGFANH 467
EM + + W S++ H
Sbjct: 554 EMPMQPDSVIWGSLLAACKVH 574
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/723 (31%), Positives = 386/723 (53%), Gaps = 56/723 (7%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM---------- 125
++ LL + V + L + +HA VK+ ++ VN+Y KCG +
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 126 EE---------------------AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
EE A+++FD +P+ + VS+ +LISGY + A+ +F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
M + G TL + AC + + L KQ+H + V + +SV N+ + YS G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 225 SLNSAIKAFNRIRE-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSIS 283
L A+ F + E ++ +SW ++I A G++ E + L + +M+ +G + + FTL S+
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 284 SVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD---EAQKLFDGMSHV 340
+ ++ L G Q H IK G+ N V + ++ Y KCG D +++K+F +
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP 307
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSR 400
+LV WN MI+G++ +L++ EA+ F ++ G +PD +F + + CS
Sbjct: 308 DLVVWNTMISGYSMNEELSE----------EAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
Query: 401 LVALEQGEQIHALTLKTGFLSD-VVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
L + Q +QIH L +K+ S+ + V AL+++Y K G ++ A VF M +S+
Sbjct: 358 LSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNC 417
Query: 460 MITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
MI G+A H +AL L++ ML +G+ PN++TFV L+AC++ G V E YF M++ +
Sbjct: 418 MIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETF 477
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
KI+P +HY C+ID+ R G +EEA FI M ++P V W+ + CR+H NM L A
Sbjct: 478 KIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERA 537
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
A +L+ ++P Y ML +++ A +WE++A V+ R +++ + SWI +K K +
Sbjct: 538 ANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHV 597
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESASV--------YHSEKL 691
F D HP E+ + L+E+++K K GY + + + E+ A +HSEKL
Sbjct: 598 FVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKL 657
Query: 692 AIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTC 751
A+AFGL++T ++VVK+ +C DCHN IK ++++ REIIVRD+ R H F +G C+C
Sbjct: 658 AVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSC 717
Query: 752 RDF 754
D+
Sbjct: 718 GDY 720
Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 158/332 (47%), Gaps = 9/332 (2%)
Query: 42 SKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIV 101
S ++ + E ++L + + + +G K+ + S+L + L H ++
Sbjct: 210 SMIVAYGQHKEGAKALALYKEM--IFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 102 KTGSHQDFFVMTFLVNVYGKCG---NMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ-PE 157
K G HQ+ V + L++ Y KCG M +++KVF + ++V W ++ISGY N + E
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 158 LAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDD-TSVGNSL 216
A+ F M G+ P + + +ACS+L S KQIH +K + SV N+L
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE 276
SLY G+L A F+R+ E N +S+ +I ++G + L + +ML GI PN+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 277 FTLTSISSVCGTMLSLRVGAQ-VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T ++ S C + G + +++ + ++ L + G ++EA++ D
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 336 GMSH-VNLVTWNAMIAGHAQMMDLAKDDLSAH 366
M + V W A++ + ++A + +A+
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAAN 539
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 344/600 (57%), Gaps = 31/600 (5%)
Query: 174 TNVTLGTALTACSSL------ESIRLGKQIHAYVVKYQTE-DDTSVGNSLCSLYSTCGS- 225
T+V L + C +L SI +QIHA+ +++ D +G L + S
Sbjct: 7 TSVLLLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP 66
Query: 226 --LNSAIKAFNRIREK-NVMSWTTVIGACGENGEAVQGLRFFSKMLSEG-IQPNEFTLTS 281
++ A K F++I + NV W T+I E G ++ + +M G ++P+ T
Sbjct: 67 PPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPF 126
Query: 282 ISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVN 341
+ TM +R+G +HS+ I+ G+ S + V+NS+++LY CG V A K+FD M +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKD 186
Query: 342 LVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSR 400
LV WN++I G A+ NG E AL++++++NS G+KPD +T S+L+ C++
Sbjct: 187 LVAWNSVINGFAE------------NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 401 LVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSM 460
+ AL G+++H +K G ++ L+++Y +CGR+E A +F EM + +SWTS+
Sbjct: 235 IGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSL 294
Query: 461 ITGFANHSLSHQALQLFEDM-LLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEY 519
I G A + +A++LF+ M G+ P ++TFVG L ACS+ GMV E YF M++EY
Sbjct: 295 IVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEY 354
Query: 520 KIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYA 579
KI+P ++H+ C++D+ R G +++A+++IK M +PN VIW + C HG+ +L +A
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFA 414
Query: 580 AEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYS 639
Q+L+L+P Y +L +++ S RW DV ++ + + + S + + ++V+
Sbjct: 415 RIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHE 474
Query: 640 FKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES-----FELTDEESASVYHSEKLAIA 694
F D HPQS I+ L E+ + + GY Q S E ++E+A VYHSEK+AIA
Sbjct: 475 FLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIA 534
Query: 695 FGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
F L++TP SPI VVK+ +C DCH IK+++ + REI+VRD R H F NG C+C+D+
Sbjct: 535 FMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDY 594
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 31/406 (7%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR-INVVSWTSLI 147
S+S+AE+ G H F++++ M A KVF + + INV W +LI
Sbjct: 46 SISDAEL--------GKHLIFYLVSL-----PSPPPMSYAHKVFSKIEKPINVFIWNTLI 92
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQT 206
GY + A ++ +M +G P T + A +++ +RLG+ IH+ V++
Sbjct: 93 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 152
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
V NSL LY+ CG + SA K F+++ EK++++W +VI ENG+ + L +++
Sbjct: 153 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 212
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M S+GI+P+ FT+ S+ S C + +L +G +VH IK+G NL N ++ LY +CG
Sbjct: 213 MNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGR 272
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS-GMK 385
V+EA+ LFD M N V+W ++I G L+ + G EA+ +F + S+ G+
Sbjct: 273 VEEAKTLFDEMVDKNSVSWTSLIVG-----------LAVNGFGKEAIELFKYMESTEGLL 321
Query: 386 PDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASR 444
P TF IL CS +++G E + + + +V++ + G++++A
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 445 VFVEMSTR-TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
M + ++ W +++ H S L F + + + PN
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPNH 425
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 8/307 (2%)
Query: 49 GNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQD 108
GNS SL + +S L E T +Y L++ + E IH+ ++++G
Sbjct: 99 GNSISAFSLYREMRVSGLVEP---DTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSL 155
Query: 109 FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLE 168
+V L+++Y CG++ A KVFD +P ++V+W S+I+G+ +N +PE A+ ++ +M
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 169 AGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
G P T+ + L+AC+ + ++ LGK++H Y++K + N L LY+ CG +
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLS-EGIQPNEFTLTSISSVCG 287
A F+ + +KN +SWT++I NG + + F M S EG+ P E T I C
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACS 335
Query: 288 TMLSLRVGAQVHSLGIKLGYASNLRVRN--SIMYLYLKCGLVDEAQKLFDGMS-HVNLVT 344
++ G + + ++ Y R+ + ++ L + G V +A + M N+V
Sbjct: 336 HCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVI 394
Query: 345 WNAMIAG 351
W ++
Sbjct: 395 WRTLLGA 401
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/709 (31%), Positives = 376/709 (53%), Gaps = 42/709 (5%)
Query: 54 VRSLGFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMT 113
+R+ F+ A + E P+ S+ +++ V ++L A + + +D
Sbjct: 106 LRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKAR----ELFEIMPERDVCSWN 161
Query: 114 FLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYP 173
+++ Y + G +++A+ VFD +P N VSW +L+S YVQNS+ E A +F
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVS 221
Query: 174 TNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAF 233
N LG + +E+ + ++ D N++ + Y+ G ++ A + F
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSMNV--------RDVVSWNTIITGYAQSGKIDEARQLF 273
Query: 234 NRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLR 293
+ ++V +WT ++ +N + F KM + NE + + ML+
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNA-------MLAGY 322
Query: 294 VGAQVHSLGIKL---GYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
V + + +L N+ N+++ Y +CG + EA+ LFD M + V+W AMIA
Sbjct: 323 VQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIA 382
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G++Q S H+ EAL +F ++ G + + +FSS L+ C+ +VALE G+Q+
Sbjct: 383 GYSQ---------SGHS--FEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
H +K G+ + VG AL+ MY KCG IE A+ +F EM+ + ++SW +MI G++ H
Sbjct: 432 HGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFG 491
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC 530
AL+ FE M G++P+ T V L+ACS+ G+V + YF M ++Y + P HY C
Sbjct: 492 EVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC 551
Query: 531 LIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKD 590
++D+ R G +E+A + +K M FEP+ IW + R HGN EL AA+++ ++P++
Sbjct: 552 MVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPEN 611
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
Y +L +++ S+GRW DV ++ R++ + + +SWI I++K ++F D HP+
Sbjct: 612 SGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEK 671
Query: 651 AEIFKVLDELVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSP 705
EIF L+EL + K GY + S L D +E YHSE+LA+A+G++ P
Sbjct: 672 DEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRP 731
Query: 706 ILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
I V+K+ +C DCHN IK + +T R II+RD+ R H F +G C+C D+
Sbjct: 732 IRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDY 780
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 192/476 (40%), Gaps = 104/476 (21%)
Query: 207 EDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSK 266
+ D N S Y G N A++ F R+ + +S+ +I NGE + F +
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 267 MLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGL 326
M E L S + + + R + L ++ ++ N+++ Y + G
Sbjct: 121 M-------PERDLVSWNVMIKGYVRNRNLGKAREL-FEIMPERDVCSWNTMLSGYAQNGC 172
Query: 327 VDEAQKLFDGMSHVNLVTWNAMIAGHAQ--------MMDLAKDD--LSAHN---GG---- 369
VD+A+ +FD M N V+WNA+++ + Q M+ ++++ L + N GG
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 370 ---TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
EA F +N D+ ++++I+T ++ +++ Q+ + DV
Sbjct: 233 KKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQL----FDESPVQDVFTW 284
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGV- 485
TA+V+ Y + +E A +F +M R +SW +M+ G+ A +LF+ M V
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 486 --------------------------RPNQVTFVGALAACSNAGMVYEALGYFEMMQKE- 518
+ + V++ +A S +G +EAL F M++E
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 519 -----------------------------------YKIKPVMDHYMCLIDMFVRLGCIEE 543
Y+ + + + L M+ + G IEE
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL--MYCKCGSIEE 462
Query: 544 AFDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLLKLKPKDCESYAML 597
A D K+M + + V W+ IAG RHG E L F+ + + LKP D A+L
Sbjct: 463 ANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/733 (30%), Positives = 369/733 (50%), Gaps = 86/733 (11%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA I+K+G+ D ++ L+ Y +A V ++P + S++SLI +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 157 ELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSL 216
+I VF M G P + L C+ L + ++GKQIH + D V S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 217 CSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ--- 273
+Y CG + A K F+R+ +K+V++ + ++ A G + +R S+M S GI+
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 274 --------------------------------PNEFTLTSISSVCGTMLSLRVGAQVHSL 301
P++ T++S+ G L +G +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 302 GIKLGYASNLRVRNSIMYLYLKCG-------------------------------LVDEA 330
IK G + V ++++ +Y K G LVD+A
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 331 QKLFDGMSH----VNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKP 386
++F+ +N+V+W ++IAG AQ KD EAL +F ++ +G+KP
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQN---GKD--------IEALELFREMQVAGVKP 386
Query: 387 DLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVF 446
+ T S+L C + AL G H ++ L +V VG+AL++MY KCGRI + VF
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVF 446
Query: 447 VEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVY 506
M T+ L+ W S++ GF+ H + + + +FE ++ ++P+ ++F L+AC G+
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 507 EALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAG 566
E YF+MM +EY IKP ++HY C++++ R G ++EA+D IK+M FEP+ +W +
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 567 CRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETD 626
CR N++L AAE+L L+P++ +Y +L +I+ + G W +V ++N L +
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 627 DWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-----EE 681
SWI++K++VY+ D HPQ +I + +DE+ ++ + G++ F L D +E
Sbjct: 627 GCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQE 686
Query: 682 SASVYHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
HSEKLA+ FGLLNTP +P+ V+K+ +C DCH IK I+S REI +RD+ R
Sbjct: 687 QMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRF 746
Query: 742 HKFVNGHCTCRDF 754
H F +G C+C DF
Sbjct: 747 HHFKDGICSCGDF 759
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 236/549 (42%), Gaps = 98/549 (17%)
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
Q HA ++K ++D + L + YS N A I + + S++++I A +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
Q + FS+M S G+ P+ L ++ VC + + +VG Q+H + G + V+
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 316 SIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ----------MMDLAKDDLSA 365
S+ ++Y++CG + +A+K+FD MS ++VT +A++ +A+ + ++ + A
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 366 H----NG----------GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ NG EA+ +F K++ G PD T SS+L L G IH
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGR-------------------------------IE 440
+K G L D V +A+++MY K G ++
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 441 RASRVFVEMSTRTL----ISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGAL 496
+A +F +T+ +SWTS+I G A + +AL+LF +M +AGV+PN VT L
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSML 395
Query: 497 AACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM---CLIDMFVRLGCIEEAFDFIKKMDF 553
AC N ALG+ ++D+ LIDM+ + G I + + M
Sbjct: 396 PACGNIA----ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFNMMP 450
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLL--KLKPKDCESYAMLLDIFVSAGRWEDVA 611
N V W+ + G HG + E L+ +LKP D S+ LL G
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVG------ 503
Query: 612 VVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQ 671
LT E W + ++ + Y KP E + + L+ +A K
Sbjct: 504 ----LTDE-------GWKYFKMMSEEYGIKPR-------LEHYSCMVNLLGRAG----KL 541
Query: 672 QESFELTDE 680
QE+++L E
Sbjct: 542 QEAYDLIKE 550
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/691 (31%), Positives = 358/691 (51%), Gaps = 22/691 (3%)
Query: 71 KVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQK 130
K +S+Y + + +IH V G + + + +V +Y K +E+A+K
Sbjct: 116 KPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARK 175
Query: 131 VFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML-EAGNYPTNVTLGTALTACSSLE 189
VFD +P + + W ++ISGY +N +I VF D++ E+ TL L A + L+
Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQ 235
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
+RLG QIH+ K V SLYS CG + F R+ +++++ +I
Sbjct: 236 ELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIH 295
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
NGE L F +++ G + TL S+ V G ++ + +H +K + S
Sbjct: 296 GYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLS 352
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
+ V ++ +Y K ++ A+KLFD +L +WNAMI+G+ Q NG
Sbjct: 353 HASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ------------NGL 400
Query: 370 TE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTA 428
TE A+S+F ++ S P+ T + IL+ C++L AL G+ +H L T F S + V TA
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 429 LVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPN 488
L+ MY KCG I A R+F M+ + ++W +MI+G+ H +AL +F +ML +G+ P
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 489 QVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFI 548
VTF+ L ACS+AG+V E F M Y +P + HY C++D+ R G ++ A FI
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI 580
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWE 608
+ M EP +W + CR H + L +E+L +L P + + +L +I + +
Sbjct: 581 EAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYP 640
Query: 609 DVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFG 668
A V+ ++ KL++ ++ I I + + F D HPQ EI++ L++L K + G
Sbjct: 641 QAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAG 700
Query: 669 YKQQESFELTD--EESASVY---HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIK 723
Y+ + L D EE + HSE+LAIAFGL+ T + I ++K+ +C DCH K
Sbjct: 701 YQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTK 760
Query: 724 IITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+I+ +T R I+VRD+ R H F +G C+C D+
Sbjct: 761 LISKITERVIVVRDANRFHHFKDGVCSCGDY 791
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/664 (31%), Positives = 366/664 (55%), Gaps = 18/664 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
+H +K+G + V LV +Y K +A++VFD + + VS+ ++I GY++
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
E ++ +FL+ L+ P +T+ + L AC L + L K I+ Y++K +++V N
Sbjct: 289 VEESVRMFLENLDQFK-PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ CG + +A FN + K+ +SW ++I ++G+ ++ ++ F M+ Q +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
T + SV + L+ G +HS GIK G +L V N+++ +Y KCG V ++ K+F
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M + VTWN +I+ + D A L + +++ S + PD+ TF L
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFAT-----------GLQVTTQMRKSEVVPDMATFLVTL 516
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+C+ L A G++IH L+ G+ S++ +G AL+ MY KCG +E +SRVF MS R ++
Sbjct: 517 PMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVV 576
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
+WT MI + + +AL+ F DM +G+ P+ V F+ + ACS++G+V E L FE M
Sbjct: 577 TWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKM 636
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
+ YKI P+++HY C++D+ R I +A +FI+ M +P+ IW+ + CR G+ME
Sbjct: 637 KTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMET 696
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
+ ++++L P D + + + + +W+ V++++ +++ +++ +SWI +
Sbjct: 697 AERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGK 756
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGY------KQQESFELTDEESASVYHSE 689
V+ F D PQS I+K L+ L GY Q E ++ HSE
Sbjct: 757 NVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSE 816
Query: 690 KLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHC 749
+LAIAFGLLNT +P+ V+K+ +C DCH K+I+ + REI+VRD+ R H F +G C
Sbjct: 817 RLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTC 876
Query: 750 TCRD 753
+C+D
Sbjct: 877 SCKD 880
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/559 (24%), Positives = 272/559 (48%), Gaps = 22/559 (3%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYV 78
R+P+SSL+ + + + S + + N +L F L P T +
Sbjct: 53 REPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYT--FP 110
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
S+++ C ++++ I+ G D FV LV++Y + G + A++VFD +P
Sbjct: 111 SVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR 170
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIH 198
++VSW SLISGY + E A+ ++ ++ + P + T+ + L A +L ++ G+ +H
Sbjct: 171 DLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLH 230
Query: 199 AYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAV 258
+ +K V N L ++Y A + F+ + ++ +S+ T+I +
Sbjct: 231 GFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVE 290
Query: 259 QGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIM 318
+ +R F + L + +P+ T++S+ CG + L + +++ +K G+ VRN ++
Sbjct: 291 ESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI 349
Query: 319 YLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSK 378
+Y KCG + A+ +F+ M + V+WN++I+G+ Q DL EA+ +F
Sbjct: 350 DVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-----------MEAMKLFKM 398
Query: 379 LNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGR 438
+ + D T+ ++++ +RL L+ G+ +H+ +K+G D+ V AL++MY KCG
Sbjct: 399 MMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGE 458
Query: 439 IERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAA 498
+ + ++F M T ++W ++I+ LQ+ M + V P+ TF+ L
Sbjct: 459 VGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPM 518
Query: 499 CSNAGMVYEALG---YFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEP 555
C A + + LG + +++ Y+ + + + LI+M+ + GC+E + ++M
Sbjct: 519 C--ASLAAKRLGKEIHCCLLRFGYESELQIGN--ALIEMYSKCGCLENSSRVFERMS-RR 573
Query: 556 NEVIWSVFIAGCRRHGNME 574
+ V W+ I +G E
Sbjct: 574 DVVTWTGMIYAYGMYGEGE 592
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 235/500 (47%), Gaps = 19/500 (3%)
Query: 89 SLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL-PRINVVSWTSLI 147
+L+ IHA ++ G F L++ Y + VF + P NV W S+I
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 148 SGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTE 207
+ +N A+ + + E+ P T + + AC+ L +G ++ ++ E
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 208 DDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKM 267
D VGN+L +YS G L A + F+ + ++++SW ++I +G + L + ++
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 268 LSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLV 327
+ I P+ FT++S+ G +L ++ G +H +K G S + V N ++ +YLK
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 328 DEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPD 387
+A+++FD M + V++N MI G+ ++ + E++ +F + N KPD
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMV-----------EESVRMFLE-NLDQFKPD 306
Query: 388 LYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFV 447
L T SS+L C L L + I+ LK GF+ + V L+++Y KCG + A VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 448 EMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYE 507
M + +SW S+I+G+ +A++LF+ M++ + + +T++ ++ + +
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 508 ALGYFEMMQKEYKIKPVMDHYM--CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIA 565
G + K +D + LIDM+ + G + ++ M + V W+ I+
Sbjct: 427 GKG---LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVIS 482
Query: 566 GCRRHGNMELGFYAAEQLLK 585
C R G+ G Q+ K
Sbjct: 483 ACVRFGDFATGLQVTTQMRK 502
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 218/426 (51%), Gaps = 21/426 (4%)
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
+ AL++ S+L +R +IHA V+ + L YS S++ F R+
Sbjct: 10 ISRALSSSSNLNELR---RIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 238 E-KNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGA 296
KNV W ++I A +NG + L F+ K+ + P+++T S+ C + +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 297 QVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMM 356
V+ + +G+ S+L V N+++ +Y + GL+ A+++FD M +LV+WN++I+G+
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY---- 182
Query: 357 DLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLK 416
S+H EAL I+ +L +S + PD +T SS+L L+ ++QG+ +H LK
Sbjct: 183 -------SSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK 235
Query: 417 TGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQL 476
+G S VVV LV MY K R A RVF EM R +S+ +MI G+ + +++++
Sbjct: 236 SGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRM 295
Query: 477 FEDMLLAGVRPNQVTFVGALAACSN-AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
F + L +P+ +T L AC + + Y M++ + ++ + + LID++
Sbjct: 296 FLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVY 352
Query: 536 VRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPK-DCESY 594
+ G + A D M+ + + V W+ I+G + G++ + ++ ++ + D +Y
Sbjct: 353 AKCGDMITARDVFNSMECK-DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 595 AMLLDI 600
ML+ +
Sbjct: 412 LMLISV 417
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 46/336 (13%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y+ L+ L + +H++ +K+G D V L+++Y KCG + ++ K+F ++
Sbjct: 410 TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGK 195
+ V+W ++IS V+ + V M ++ P T L C+SL + RLGK
Sbjct: 470 GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGK 529
Query: 196 QIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENG 255
+IH ++++ E + +GN+L +YS CG L ++ + F R+ ++V++WT +I A G G
Sbjct: 530 EIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYG 589
Query: 256 EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRN 315
E + L F+ M GI P+ +I C HS
Sbjct: 590 EGEKALETFADMEKSGIVPDSVVFIAIIYACS-----------HS--------------- 623
Query: 316 SIMYLYLKCGLVDEAQKLFDGM-SHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
GLVDE F+ M +H + + MI +A ++DL LS ++A
Sbjct: 624 ---------GLVDEGLACFEKMKTHYKI---DPMIEHYACVVDL----LSRSQKISKAEE 667
Query: 375 IFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
+ + +KPD ++S+L C +E E++
Sbjct: 668 F---IQAMPIKPDASIWASVLRACRTSGDMETAERV 700
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 54 VRSLGFQEALSVLTEGPKVQT----SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDF 109
VR F L V T+ K + ++++ L C + + + IH +++ G +
Sbjct: 485 VRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESEL 544
Query: 110 FVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEA 169
+ L+ +Y KCG +E + +VF+ + R +VV+WT +I Y + E A+ F DM ++
Sbjct: 545 QIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKS 604
Query: 170 GNYPTNVTLGTALTACS 186
G P +V + ACS
Sbjct: 605 GIVPDSVVFIAIIYACS 621
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/694 (32%), Positives = 363/694 (52%), Gaps = 23/694 (3%)
Query: 70 PKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQ 129
P V T V++L C + + + +H VK ++ + L+++Y KCG + AQ
Sbjct: 290 PDVAT--LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQ 347
Query: 130 KVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN--YPTNVTLGTALTACSS 187
+F NVVSW +++ G+ V ML G VT+ A+ C
Sbjct: 348 MIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFH 407
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
+ K++H Y +K + + V N+ + Y+ CGSL+ A + F+ IR K V SW +
Sbjct: 408 ESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNAL 467
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
IG ++ + L +M G+ P+ FT+ S+ S C + SLR+G +VH I+
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+L V S++ LY+ CG + Q LFD M +LV+WN +I G+ Q N
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQ------------N 575
Query: 368 GGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G + AL +F ++ G++ + + CS L +L G + HA LK D +
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
+L++MY K G I ++S+VF + ++ SW +MI G+ H L+ +A++LFE+M G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 487 PNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFD 546
P+ +TF+G L AC+++G+++E L Y + M+ + +KP + HY C+IDM R G +++A
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 547 FI-KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAG 605
+ ++M E + IW ++ CR H N+E+G A +L +L+P+ E+Y +L +++ G
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 815
Query: 606 RWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAK 665
+WEDV V+ E L + SWI + KV+SF + EI + L K
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS 875
Query: 666 CFGYKQQE---SFELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHN 720
GY+ +L++EE HSEKLA+ +GL+ T + I V K+ +C DCHN
Sbjct: 876 KMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHN 935
Query: 721 FIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
K+I+ + REI+VRD+KR H F NG C+C D+
Sbjct: 936 AAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDY 969
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 245/507 (48%), Gaps = 29/507 (5%)
Query: 76 SYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNL 135
+Y +++ C + +H +VKTG +D FV LV+ YG G + +A ++FD +
Sbjct: 189 TYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIM 248
Query: 136 PRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGN----YPTNVTLGTALTACSSLESI 191
P N+VSW S+I + N E + + +M+E P TL T L C+ I
Sbjct: 249 PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 308
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
LGK +H + VK + + + + N+L +YS CG + +A F KNV+SW T++G
Sbjct: 309 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 368
Query: 252 GENGEAVQGLRFFSKMLSEG--IQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYAS 309
G+ +ML+ G ++ +E T+ + VC L ++H +K +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 310 NLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGG 369
N V N+ + Y KCG + AQ++F G+ + +WNA+I GHAQ D + L AH
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAH--- 484
Query: 370 TEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTAL 429
++ SG+ PD +T S+L+ CS+L +L G+++H ++ D+ V ++
Sbjct: 485 -------LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 537
Query: 430 VNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQ 489
+++Y CG + +F M ++L+SW ++ITG+ + +AL +F M+L G++
Sbjct: 538 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 597
Query: 490 VTFVGALAACS-----NAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEA 544
++ + ACS G A +++ + I LIDM+ + G I ++
Sbjct: 598 ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA------CSLIDMYAKNGSITQS 651
Query: 545 FDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ E + W+ I G HG
Sbjct: 652 SKVFNGLK-EKSTASWNAMIMGYGIHG 677
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 19/429 (4%)
Query: 80 LLQECVNRKSLSNAEIIHAHIV-KTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRI 138
LLQ RK + IH + T D + T ++ +Y CG+ ++++ VFD L
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 139 NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNY-PTNVTLGTALTACSSLESIRLGKQI 197
N+ W ++IS Y +N + + F++M+ + P + T + AC+ + + +G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
H VVK +D VGN+L S Y T G + A++ F+ + E+N++SW ++I +NG +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 258 VQGLRFFSKMLSE----GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRV 313
+ +M+ E P+ TL ++ VC + +G VH +KL L +
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 314 RNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEAL 373
N++M +Y KCG + AQ +F ++ N+V+WN M+ G SA
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG-----------FSAEGDTHGTF 378
Query: 374 SIFSKLNSSG--MKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVN 431
+ ++ + G +K D T + + +C L +++H +LK F+ + +V A V
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVA 438
Query: 432 MYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVT 491
Y KCG + A RVF + ++T+ SW ++I G A + +L M ++G+ P+ T
Sbjct: 439 SYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFT 498
Query: 492 FVGALAACS 500
L+ACS
Sbjct: 499 VCSLLSACS 507
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 209/414 (50%), Gaps = 18/414 (4%)
Query: 68 EGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEE 127
E K + ++ + C + L + + +H + +K + V V Y KCG++
Sbjct: 389 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 128 AQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSS 187
AQ+VF + V SW +LI G+ Q++ P L++ L M +G P + T+ + L+ACS
Sbjct: 449 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 508
Query: 188 LESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTV 247
L+S+RLGK++H ++++ E D V S+ SLY CG L + F+ + +K+++SW TV
Sbjct: 509 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 568
Query: 248 IGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
I +NG + L F +M+ GIQ ++ + C + SLR+G + H+ +K
Sbjct: 569 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + S++ +Y K G + ++ K+F+G+ + +WNAMI G+ H
Sbjct: 629 EDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG-----------IHG 677
Query: 368 GGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVG 426
EA+ +F ++ +G PD TF +LT C+ + +G + + G ++
Sbjct: 678 LAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHY 737
Query: 427 TALVNMYKKCGRIERASRVFV-EMSTRTLIS-WTSMITGFANHSLSHQALQLFE 478
+++M + G++++A RV EMS + W S+++ HQ L++ E
Sbjct: 738 ACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS----CRIHQNLEMGE 787
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 160/332 (48%), Gaps = 21/332 (6%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVV-KYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNR 235
LG L A + I +G++IH V + +D + + ++Y+ CGS + + F+
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA 145
Query: 236 IREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSE-GIQPNEFTLTSISSVCGTMLSLRV 294
+R KN+ W VI + N + L F +M+S + P+ FT + C M + +
Sbjct: 146 LRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA---- 350
G VH L +K G ++ V N+++ Y G V +A +LFD M NLV+WN+MI
Sbjct: 206 GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSD 265
Query: 351 -GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
G ++ L ++ NG PD+ T ++L +C+R + G+
Sbjct: 266 NGFSEESFLLLGEMMEENG------------DGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
+H +K ++V+ AL++MY KCG I A +F + + ++SW +M+ GF+
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 470 SHQALQLFEDMLLAG--VRPNQVTFVGALAAC 499
+H + ML G V+ ++VT + A+ C
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 147/313 (46%), Gaps = 37/313 (11%)
Query: 287 GTMLSLRVGAQVHSLGIKLGYASNLRVRNS------IMYLYLKCGLVDEAQKLFDGMSHV 340
G + +G ++H L + + R+RN I+ +Y CG D+++ +FD +
Sbjct: 95 GKRKDIEMGRKIHQL-----VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 341 NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICS 399
NL WNA+I+ ++ +++L E L F ++ +++ + PD +T+ ++ C+
Sbjct: 150 NLFQWNAVISSYS------RNELY-----DEVLETFIEMISTTDLLPDHFTYPCVIKACA 198
Query: 400 RLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTS 459
+ + G +H L +KTG + DV VG ALV+ Y G + A ++F M R L+SW S
Sbjct: 199 GMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNS 258
Query: 460 MITGFANHSLSHQALQLFEDMLL----AGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
MI F+++ S ++ L +M+ P+ T V L C+ + G
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV---- 314
Query: 516 QKEYKIKPVMDHYM----CLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHG 571
+ +K +D + L+DM+ + GCI A I KM+ N V W+ + G G
Sbjct: 315 -HGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 572 NMELGFYAAEQLL 584
+ F Q+L
Sbjct: 373 DTHGTFDVLRQML 385
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/601 (33%), Positives = 344/601 (57%), Gaps = 18/601 (2%)
Query: 87 RKSLSNAEIIHAHIVKTGSHQD---FFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSW 143
R SL NA + + + ++ + T L+ Y + G +EEA+ +FD +P +VV+W
Sbjct: 20 RSSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAW 79
Query: 144 TSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVK 203
T++I+GY ++ A F +M++ G P TL + L +C +++ + G +H VVK
Sbjct: 80 TAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVK 139
Query: 204 YQTEDDTSVGNSLCSLYSTCG-SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLR 262
E V N++ ++Y+TC ++ +A F I+ KN ++WTT+I G+ + GL+
Sbjct: 140 LGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLK 199
Query: 263 FFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYL 322
+ +ML E + + +T ++ S+ G Q+H+ IK G+ SNL V NSI+ LY
Sbjct: 200 MYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYC 259
Query: 323 KCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSS 382
+CG + EA+ F M +L+TWN +I+ +L + D S EAL +F + S
Sbjct: 260 RCGYLSEAKHYFHEMEDKDLITWNTLIS------ELERSDSS------EALLMFQRFESQ 307
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G P+ YTF+S++ C+ + AL G+Q+H + GF +V + AL++MY KCG I +
Sbjct: 308 GFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDS 367
Query: 443 SRVFVEM-STRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
RVF E+ R L+SWTSM+ G+ +H +A++LF+ M+ +G+RP+++ F+ L+AC +
Sbjct: 368 QRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRH 427
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWS 561
AG+V + L YF +M+ EY I P D Y C++D+ R G I EA++ +++M F+P+E W
Sbjct: 428 AGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWG 487
Query: 562 VFIAGCRRHG-NMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREE 620
+ C+ H N + AA ++++LKPK +Y ML I+ + G+W D A V+ + R
Sbjct: 488 AILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMM 547
Query: 621 KLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDE 680
+ SWI ++++V+SF +D + P ++ ++ VL L+E+ + GY + + D+
Sbjct: 548 GNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLVNDQ 607
Query: 681 E 681
E
Sbjct: 608 E 608
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 198/374 (52%), Gaps = 15/374 (4%)
Query: 79 SLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCG-NMEEAQKVFDNLPR 137
S+L+ C N K L+ ++H +VK G +V ++N+Y C ME A +F ++
Sbjct: 116 SVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKV 175
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
N V+WT+LI+G+ + ++ ML T + A+ A +S++S+ GKQI
Sbjct: 176 KNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQI 235
Query: 198 HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEA 257
HA V+K + + V NS+ LY CG L+ A F+ + +K++++W T+I E ++
Sbjct: 236 HASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDS 294
Query: 258 VQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSI 317
+ L F + S+G PN +T TS+ + C + +L G Q+H + G+ N+ + N++
Sbjct: 295 SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANAL 354
Query: 318 MYLYLKCGLVDEAQKLF-DGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIF 376
+ +Y KCG + ++Q++F + + NLV+W +M+ G+ +H G EA+ +F
Sbjct: 355 IDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYG-----------SHGYGAEAVELF 403
Query: 377 SKLNSSGMKPDLYTFSSILTICSRLVALEQG-EQIHALTLKTGFLSDVVVGTALVNMYKK 435
K+ SSG++PD F ++L+ C +E+G + + + + G D + +V++ +
Sbjct: 404 DKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGR 463
Query: 436 CGRIERASRVFVEM 449
G+I A + M
Sbjct: 464 AGKIGEAYELVERM 477
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/673 (32%), Positives = 354/673 (52%), Gaps = 86/673 (12%)
Query: 115 LVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPT 174
LV+ Y K G ++EA+KVFD +P NVVSWT+L+ GYV N + ++A +F M E
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 175 NVTL------GTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNS 228
V L G AC E I I TS+ + LC G ++
Sbjct: 145 TVMLIGFLQDGRIDDACKLYEMIPDKDNIAR----------TSMIHGLCKE----GRVDE 190
Query: 229 AIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGT 288
A + F+ + E++V++WTT++ G+N + F M + E + TS
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTS------- 239
Query: 289 MLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAM 348
ML +GY N G +++A++LF+ M ++ NAM
Sbjct: 240 ML--------------MGYVQN--------------GRIEDAEELFEVMPVKPVIACNAM 271
Query: 349 IAGHAQMMDLAK-----DDLSAHNGGT---------------EALSIFSKLNSSGMKPDL 388
I+G Q ++AK D + N + EAL +F + G++P
Sbjct: 272 ISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTF 331
Query: 389 YTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVE 448
T SIL++C+ L +L G+Q+HA ++ F DV V + L+ MY KCG + ++ +F
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 449 MSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAG-VRPNQVTFVGALAACSNAGMVYE 507
++ +I W S+I+G+A+H L +AL++F +M L+G +PN+VTFV L+ACS AGMV E
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 508 ALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGC 567
L +E M+ + +KP+ HY C++DM R G EA + I M EP+ +W + C
Sbjct: 452 GLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
Query: 568 RRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDD 627
R H +++ + A++L++++P++ +Y +L +++ S GRW DVA ++ L + + ++
Sbjct: 512 RTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPG 571
Query: 628 WSWIRIKDKVYSF-KPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTD-EESASV 685
SW +++KV++F + HP+ I K+LDEL + GY S+ L D +E V
Sbjct: 572 CSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKV 631
Query: 686 ----YHSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRL 741
YHSE+LA+A+ LL PI V+K+ +C DCH IKII+ + REII+RD+ R
Sbjct: 632 NSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRF 691
Query: 742 HKFVNGHCTCRDF 754
H F NG C+C+D+
Sbjct: 692 HHFRNGECSCKDY 704
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 179/368 (48%), Gaps = 55/368 (14%)
Query: 105 SHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFL 164
S + T +V YG+ +++A+K+FD +P VSWTS++ GYVQN + E A +F
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF- 257
Query: 165 DMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCG 224
V + AC+++ S LG++ G
Sbjct: 258 ----------EVMPVKPVIACNAMIS-GLGQK---------------------------G 279
Query: 225 SLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISS 284
+ A + F+ ++E+N SW TVI NG ++ L F M +G++P TL SI S
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 285 VCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVT 344
VC ++ SL G QVH+ ++ + ++ V + +M +Y+KCG + +++ +FD +++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 345 WNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSG-MKPDLYTFSSILTICSRLVA 403
WN++I+G+A +H G EAL +F ++ SG KP+ TF + L+ CS
Sbjct: 400 WNSIISGYA-----------SHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 404 LEQGEQIHALTLKTGFLSDVVVG--TALVNMYKKCGRIERASRVFVEMSTRTLIS-WTSM 460
+E+G +I+ ++++ F + +V+M + GR A + M+ + W S+
Sbjct: 449 VEEGLKIYE-SMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 461 ITGFANHS 468
+ HS
Sbjct: 508 LGACRTHS 515
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 191/454 (42%), Gaps = 81/454 (17%)
Query: 60 QEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVY 119
+A + P+ S+ S+L V + +AE + + + +++
Sbjct: 220 DDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE----ELFEVMPVKPVIACNAMISGL 275
Query: 120 GKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLG 179
G+ G + +A++VFD++ N SW ++I + +N A+ +F+ M + G PT TL
Sbjct: 276 GQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLI 335
Query: 180 TALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREK 239
+ L+ C+SL S+ GKQ+HA +V+ Q + D V + L ++Y CG L + F+R K
Sbjct: 336 SILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 240 NVMSWTTVIGACGENGEAVQGLRFFSKM-LSEGIQPNEFTLTSISSVCGTMLSLRVGAQV 298
+++ W ++I +G + L+ F +M LS +PNE T + S C
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSAC------------ 443
Query: 299 HSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDL 358
YA G+V+E K+++ M V V + A +A M+D+
Sbjct: 444 -------SYA----------------GMVEEGLKIYESMESVFGV--KPITAHYACMVDM 478
Query: 359 AKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGE-------QIH 411
L EA+ + ++S ++PD + S+L C L+ E +I
Sbjct: 479 ----LGRAGRFNEAMEM---IDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIE 531
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTL-----ISWTSMIT---- 462
T L L NMY GR + + M TR + SWT +
Sbjct: 532 PENSGTYIL--------LSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHA 583
Query: 463 ----GFANHSLSHQALQLFE--DMLL--AGVRPN 488
G +H L++ + D LL AG P+
Sbjct: 584 FTRGGINSHPEQESILKILDELDGLLREAGYNPD 617
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 154/375 (41%), Gaps = 82/375 (21%)
Query: 204 YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRF 263
Y T N + S G ++ A K F+ K++ SW +++ N +
Sbjct: 11 YSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKL 70
Query: 264 FSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLK 323
F +M P+ N+ N ++ Y+K
Sbjct: 71 FDEM------PDR---------------------------------NIISWNGLVSGYMK 91
Query: 324 CGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTE-ALSIFSKLNSS 382
G +DEA+K+FD M N+V+W A++ G+ HNG + A S+F K+
Sbjct: 92 NGEIDEARKVFDLMPERNVVSWTALVKGY------------VHNGKVDVAESLFWKM--- 136
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS-DVVVGTALVNMYKKCGRIER 441
P+ S + + + L+ G A L D + T++++ K GR++
Sbjct: 137 ---PEKNKVSWTVML---IGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 442 ASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSN 501
A +F EMS R++I+WT+M+TG+ ++ A ++F+ M +V++ L
Sbjct: 191 AREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----PEKTEVSWTSMLMGYVQ 246
Query: 502 AGMVYEALGYFEMMQKEYKIKPVMDHYMC--LIDMFVRLGCIEEA---FDFIKKMDFEPN 556
G + +A FE+M +KPV+ C +I + G I +A FD +K E N
Sbjct: 247 NGRIEDAEELFEVM----PVKPVI---ACNAMISGLGQKGEIAKARRVFDSMK----ERN 295
Query: 557 EVIWSVFIAGCRRHG 571
+ W I R+G
Sbjct: 296 DASWQTVIKIHERNG 310
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/626 (33%), Positives = 330/626 (52%), Gaps = 28/626 (4%)
Query: 141 VSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAY 200
+S LI + + + AI V L + P+ T + C S+ ++H +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRV----LSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 201 VVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQG 260
++ ++ D + L +YS GS++ A K F++ R++ + W + A G +
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 261 LRFFSKMLSEGIQPNEFTLTSISSVC----GTMLSLRVGAQVHSLGIKLGYASNLRVRNS 316
L + KM G++ + FT T + C T+ L G ++H+ + GY+S++ + +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 317 IMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT-EALSI 375
++ +Y + G VD A +F GM N+V+W+AMIA +A+ NG EAL
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK------------NGKAFEALRT 270
Query: 376 FSKL--NSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMY 433
F ++ + P+ T S+L C+ L ALEQG+ IH L+ G S + V +ALV MY
Sbjct: 271 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Query: 434 KKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFV 493
+CG++E RVF M R ++SW S+I+ + H +A+Q+FE+ML G P VTFV
Sbjct: 331 GRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 494 GALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDF 553
L ACS+ G+V E FE M +++ IKP ++HY C++D+ R ++EA ++ M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 554 EPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVV 613
EP +W + CR HGN+EL A+ +L L+PK+ +Y +L DI+ A W++V V
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Query: 614 KNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQE 673
K L L + W+ ++ K+YSF D +P +I L +L E K GY Q
Sbjct: 511 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQT 570
Query: 674 S---FELTDEESASVY--HSEKLAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSL 728
+EL EE + HSEKLA+AFGL+NT PI + K+ +C DCH F K I+
Sbjct: 571 KGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKF 630
Query: 729 TAREIIVRDSKRLHKFVNGHCTCRDF 754
+EI+VRD R H+F NG C+C D+
Sbjct: 631 MEKEILVRDVNRFHRFKNGVCSCGDY 656
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 222/444 (50%), Gaps = 30/444 (6%)
Query: 19 RQPSSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSL----GFQEALSVLTEGPKVQT 74
+ PS S+A N ++S +G+K+ N++ ++SL ++A+ VL++
Sbjct: 26 KPPSCSVAL---NNPSIS-SGAGAKI----SNNQLIQSLCKEGKLKQAIRVLSQESSPSQ 77
Query: 75 SSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDN 134
+Y L+ C +R SLS+A +H HI+ GS QD F+ T L+ +Y G+++ A+KVFD
Sbjct: 78 QTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDK 137
Query: 135 LPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE----S 190
+ + W +L E + ++ M G T L AC + E
Sbjct: 138 TRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNH 197
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
+ GK+IHA++ + + +L +Y+ G ++ A F + +NV+SW+ +I
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIAC 257
Query: 251 CGENGEAVQGLRFFSKMLSE--GIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYA 308
+NG+A + LR F +M+ E PN T+ S+ C ++ +L G +H ++ G
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 309 SNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG 368
S L V ++++ +Y +CG ++ Q++FD M ++V+WN++I+ + H
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYG-----------VHGY 366
Query: 369 GTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKT-GFLSDVVVGT 427
G +A+ IF ++ ++G P TF S+L CS +E+G+++ + G +
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 428 ALVNMYKKCGRIERASRVFVEMST 451
+V++ + R++ A+++ +M T
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRT 450
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 10/184 (5%)
Query: 78 VSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPR 137
VS+LQ C + +L ++IH +I++ G V++ LV +YG+CG +E Q+VFD +
Sbjct: 289 VSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 138 INVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQI 197
+VVSW SLIS Y + + AI +F +ML G PT VT + L ACS + GK++
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Query: 198 -----HAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR-EKNVMSWTTVIGAC 251
+ +K Q E + L L+ A K +R E W +++G+C
Sbjct: 409 FETMWRDHGIKPQIEHYA----CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 252 GENG 255
+G
Sbjct: 465 RIHG 468
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 328/604 (54%), Gaps = 11/604 (1%)
Query: 62 ALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGK 121
A+ V+ TS +L+ C +++ E +HA+ VKT +V + L+++Y +
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 122 CGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTA 181
G ++++ +VF +P N V+WT++I+G V + + + F +M + T A
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC+ L ++ GK IH +V+ V NSL ++Y+ CG + + F + E++V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT++I A G+ V+ + F KM + + PNE T S+ S C ++ L G Q+H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+ LG +L V NS+M +Y CG + A LF GM ++++W+ +I G+ Q
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA------ 389
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
G E FS + SG KP + +S+L++ + +E G Q+HAL L G
Sbjct: 390 -----GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ 444
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
+ V ++L+NMY KCG I+ AS +F E ++S T+MI G+A H S +A+ LFE L
Sbjct: 445 NSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSL 504
Query: 482 LAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMFVRLGCI 541
G RP+ VTF+ L AC+++G + YF MMQ+ Y ++P +HY C++D+ R G +
Sbjct: 505 KVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRL 564
Query: 542 EEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLDIF 601
+A I +M ++ ++V+W+ + C+ G++E G AAE++L+L P + L +I+
Sbjct: 565 SDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIY 624
Query: 602 VSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDELV 661
S G E+ A V+ + + + + WS I+IKD V +F D HPQS +I+ +L+ V
Sbjct: 625 SSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAV 684
Query: 662 EKAK 665
A+
Sbjct: 685 SGAE 688
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/552 (25%), Positives = 244/552 (44%), Gaps = 66/552 (11%)
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYV--QNSQPELAIHVFLDMLEAGNYPTNVTLGT 180
GN+ A++VFD +P ++VSWTS+I YV NS L + + +++ P L
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 181 ALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKN 240
L AC +I G+ +HAY VK VG+SL +Y G ++ + + F+ + +N
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 241 VMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHS 300
++WT +I G +GL +FS+M + +T C + ++ G +H+
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHT 233
Query: 301 LGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAK 360
I G+ + L V NS+ +Y +CG + + LF+ MS ++V+W ++I + ++ K
Sbjct: 234 HVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVK 293
Query: 361 DDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFL 420
A+ F K+ +S + P+ TF+S+ + C+ L L GEQ+H L G
Sbjct: 294 -----------AVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDM 480
+ V +++ MY CG + AS +F M R +ISW+++I G+ + + F M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 481 LLAGVRPNQVTFVGALAACSN-----AGMVYEALGYFEMMQKEYKIKPVMDHYMCLIDMF 535
+G +P L+ N G AL +++ ++ LI+M+
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS------SLINMY 456
Query: 536 VRLGCIEEA----------------------------------FDFIKKMDFEPNEVIWS 561
+ G I+EA F+ K+ F P+ V +
Sbjct: 457 SKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFI 516
Query: 562 VFIAGCRRHGNMELGFY---AAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTR 618
+ C G ++LGF+ ++ ++P E Y ++D+ AGR D + N
Sbjct: 517 SVLTACTHSGQLDLGFHYFNMMQETYNMRPAK-EHYGCMVDLLCRAGRLSDAEKMIN--- 572
Query: 619 EEKLSETDDWSW 630
E + DD W
Sbjct: 573 -EMSWKKDDVVW 583
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 146/302 (48%), Gaps = 30/302 (9%)
Query: 315 NSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALS 374
NS + + G + A+++FD M H ++V+W ++I K ++A+N EAL
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSII----------KRYVTANN-SDEALI 92
Query: 375 IFSKLN--SSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNM 432
+FS + + PD S +L C + + GE +HA +KT LS V VG++L++M
Sbjct: 93 LFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDM 152
Query: 433 YKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTF 492
YK+ G+I+++ RVF EM R ++WT++ITG + + L F +M + + TF
Sbjct: 153 YKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTF 212
Query: 493 VGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMC----LIDMFVRLGCIEEAFDFI 548
AL AC AG+ + Y + + ++ + +C L M+ G +++
Sbjct: 213 AIALKAC--AGL--RQVKYGKAIHTHVIVRGFVTT-LCVANSLATMYTECGEMQDGLCLF 267
Query: 549 KKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLK----PKDCESYAMLLDIFVSA 604
+ M E + V W+ I +R G A E +K++ P + +++A + S
Sbjct: 268 ENMS-ERDVVSWTSLIVAYKRIGQ---EVKAVETFIKMRNSQVPPNEQTFASMFSACASL 323
Query: 605 GR 606
R
Sbjct: 324 SR 325
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 6/215 (2%)
Query: 58 GFQEALSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
GF+ + G K + SLL N + +HA + G Q+ V + L+N
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLIN 454
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
+Y KCG+++EA +F R ++VS T++I+GY ++ + + AI +F L+ G P +VT
Sbjct: 455 MYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVT 514
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG---NSLCSLYSTCGSLNSAIKAFN 234
+ LTAC+ + LG H + + +T + + L G L+ A K N
Sbjct: 515 FISVLTACTHSGQLDLG--FHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMIN 572
Query: 235 RIR-EKNVMSWTTVIGACGENGEAVQGLRFFSKML 268
+ +K+ + WTT++ AC G+ +G R ++L
Sbjct: 573 EMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 328/580 (56%), Gaps = 18/580 (3%)
Query: 182 LTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNV 241
L AC ++R G+++HA+++K + T + L Y C L A K + + EKNV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 242 MSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSL 301
+SWT +I + G + + L F++M+ +PNEFT ++ + C L +G Q+H L
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 302 GIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKD 361
+K Y S++ V +S++ +Y K G + EA+++F+ + ++V+ A+IAG+AQ L D
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ---LGLD 235
Query: 362 DLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLS 421
+ EAL +F +L+S GM P+ T++S+LT S L L+ G+Q H L+
Sbjct: 236 E--------EALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPF 287
Query: 422 DVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDML 481
V+ +L++MY KCG + A R+F M RT ISW +M+ G++ H L + L+LF M
Sbjct: 288 YAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 482 -LAGVRPNQVTFVGALAACSNAGMVYEALGYFE-MMQKEYKIKPVMDHYMCLIDMFVRLG 539
V+P+ VT + L+ CS+ M L F+ M+ EY KP +HY C++DM R G
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAG 407
Query: 540 CIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCESYAMLLD 599
I+EAF+FIK+M +P + + CR H ++++G +L++++P++ +Y +L +
Sbjct: 408 RIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSN 467
Query: 600 IFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEIFKVLDE 659
++ SAGRW DV V+ + ++ +++ SWI+ + ++ F ND HP+ E+ + E
Sbjct: 468 LYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKE 527
Query: 660 LVEKAKCFGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPILVVKSTTM 714
+ K K GY S L D +E + HSEKLA+ FGL+ T PI V K+ +
Sbjct: 528 ISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRI 587
Query: 715 CRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
C DCHNF KI + + RE+ +RD R H+ V+G C+C D+
Sbjct: 588 CVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDY 627
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/398 (30%), Positives = 202/398 (50%), Gaps = 15/398 (3%)
Query: 59 FQEAL-SVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVN 117
QEAL + GP++ Y +LL C+++++L + + +HAH++KT ++ T L+
Sbjct: 36 LQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLI 95
Query: 118 VYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVT 177
YGKC +E+A+KV D +P NVVSWT++IS Y Q A+ VF +M+ + P T
Sbjct: 96 FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFT 155
Query: 178 LGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIR 237
T LT+C + LGKQIH +VK+ + VG+SL +Y+ G + A + F +
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 238 EKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQ 297
E++V+S T +I + G + L F ++ SEG+ PN T S+ + + L G Q
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 298 VHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMD 357
H ++ ++NS++ +Y KCG + A++LFD M ++WNAM+ G+
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGY----- 330
Query: 358 LAKDDLSAHNGGTEALSIFSKL-NSSGMKPDLYTFSSILTICSRLVALEQGEQIH--ALT 414
S H G E L +F + + +KPD T ++L+ CS + G I +
Sbjct: 331 ------SKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVA 384
Query: 415 LKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
+ G +V+M + GRI+ A M ++
Sbjct: 385 GEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 46/246 (18%)
Query: 383 GMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERA 442
G + + + ++L C AL G+++HA +KT +L + T L+ Y KC +E A
Sbjct: 47 GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDA 106
Query: 443 SRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAAC--- 499
+V EM + ++SWT+MI+ ++ S +AL +F +M+ + +PN+ TF L +C
Sbjct: 107 RKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 500 SNAGM----------------VYEALGYFEMMQKEYKIKPVMDHYMCL-----------I 532
S G+ ++ +M K +IK + + CL I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 533 DMFVRLGCIEEAFDFIKKMDFE---PNEVIWSVFIAGCR-----RHGNM--------ELG 576
+ +LG EEA + ++ E PN V ++ + HG EL
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 577 FYAAEQ 582
FYA Q
Sbjct: 287 FYAVLQ 292
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 238/741 (32%), Positives = 387/741 (52%), Gaps = 73/741 (9%)
Query: 54 VRSLGFQEALSVLTEGP-KVQTS-SYVSLLQECVNRKSLSNAEIIHAHIVKTGSH----- 106
VRS + A+S+ P ++Q+ +Y +L Q C +++L + +H H++ SH
Sbjct: 37 VRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHML---SHPYCYS 93
Query: 107 QDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDM 166
Q+ + FL+N+Y KCGN+ A++VFD +P NVVSWT+LI+GYVQ + +F M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 167 LEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSL 226
L + +P TL + LT+C GKQ+H +K V N++ S+Y C
Sbjct: 154 L-SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDG 208
Query: 227 NSAIKA---FNRIREKNVMSWTTVIGA--CGENGEAVQGLRFFSKMLSEGIQPNEFTLTS 281
+A +A F I+ KN+++W ++I A C G+ G+ F +M S+G+ + TL +
Sbjct: 209 AAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGV--FMRMHSDGVGFDRATLLN 266
Query: 282 ISSVCGTMLSL------RVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVD--EAQKL 333
I S L + Q+HSL +K G + V +++ +Y + L D + KL
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM-LEDYTDCYKL 325
Query: 334 FDGMSHV-NLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFS 392
F MSH ++V WN +I A + D + A+ +F +L + PD YTFS
Sbjct: 326 FMEMSHCRDIVAWNGIITAFA-VYDPER-----------AIHLFGQLRQEKLSPDWYTFS 373
Query: 393 SILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTR 452
S+L C+ LV IHA +K GFL+D V+ +L++ Y KCG ++ RVF +M +R
Sbjct: 374 SVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR 433
Query: 453 TLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYF 512
++SW SM+ ++ H L +F+ M + P+ TF+ L+ACS+AG V E L F
Sbjct: 434 DVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIF 490
Query: 513 EMMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGN 572
M ++ + P ++HY C+IDM R EA + IK+M +P+ V+W + CR+HGN
Sbjct: 491 RSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGN 550
Query: 573 MELGFYAAEQLLKL-KPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWI 631
LG AA++L +L +P + SY + +I+ + G + + + ++ + D SW
Sbjct: 551 TRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWT 610
Query: 632 RIKDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS------- 684
I +KV+ F P +++ L L+ K GY + + SAS
Sbjct: 611 EIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEMGY-------VPEMRSASQDIEDEE 663
Query: 685 ------VYHSEKLAIAFGLLNTPI-----VSPILVVKSTTMCRDCHNFIKIITSLTAREI 733
++HSEKLA+AF ++ V+ I ++K+T +C DCHNF+K+ + L +EI
Sbjct: 664 QEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICIDCHNFMKLASKLLGKEI 723
Query: 734 IVRDSKRLHKFVNGHCTCRDF 754
++RDS R H F + C+C D+
Sbjct: 724 LMRDSNRFHHFKDSSCSCNDY 744
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/664 (29%), Positives = 356/664 (53%), Gaps = 16/664 (2%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH ++ H D F++ L+ + + +F + N+ + SLI+G+V N
Sbjct: 32 IHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHL 91
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
+ +FL + + G Y T L AC+ S +LG +H+ VVK D + S
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L S+YS G LN A K F+ I +++V++WT + +G + + F KM+ G++P+
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ + + S C + L G + ++ N VR +++ LY KCG +++A+ +FD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSIL 395
M ++VTW+ MI G+A +++ E + +F ++ +KPD ++ L
Sbjct: 272 SMVEKDIVTWSTMIQGYA-----------SNSFPKEGIELFLQMLQENLKPDQFSIVGFL 320
Query: 396 TICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLI 455
+ C+ L AL+ GE +L + FL+++ + AL++MY KCG + R VF EM + ++
Sbjct: 321 SSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 456 SWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMM 515
+ I+G A + + +F G+ P+ TF+G L C +AG++ + L +F +
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAI 440
Query: 516 QKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMEL 575
Y +K ++HY C++D++ R G +++A+ I M PN ++W ++GCR + +L
Sbjct: 441 SCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQL 500
Query: 576 GFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKD 635
++L+ L+P + +Y L +I+ GRW++ A V+++ ++ + + +SWI ++
Sbjct: 501 AETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Query: 636 KVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQES---FELTDEESASV--YHSEK 690
KV+ F +D HP S +I+ L++L + + G+ F++ +EE V YHSEK
Sbjct: 561 KVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEK 620
Query: 691 LAIAFGLLNTPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCT 750
LA+A GL++T I VVK+ +C DCH +K+I+ +T REI+VRD+ R H F NG C+
Sbjct: 621 LAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCS 680
Query: 751 CRDF 754
C D+
Sbjct: 681 CNDY 684
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 208/404 (51%), Gaps = 15/404 (3%)
Query: 63 LSVLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKC 122
LS+ G + ++ +L+ C S +H+ +VK G + D MT L+++Y
Sbjct: 100 LSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS 159
Query: 123 GNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTAL 182
G + +A K+FD +P +VV+WT+L SGY + + AI +F M+E G P + + L
Sbjct: 160 GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVL 219
Query: 183 TACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVM 242
+AC + + G+ I Y+ + + + ++ V +L +LY+ CG + A F+ + EK+++
Sbjct: 220 SACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIV 279
Query: 243 SWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLG 302
+W+T+I N +G+ F +ML E ++P++F++ S C ++ +L +G SL
Sbjct: 280 TWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI 339
Query: 303 IKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDD 362
+ + +NL + N+++ +Y KCG + ++F M ++V NA I+G A+
Sbjct: 340 DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAK-------- 391
Query: 363 LSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ-IHALTLKTGFL 420
NG + + ++F + G+ PD TF +L C ++ G + +A++
Sbjct: 392 ----NGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
Query: 421 SDVVVGTALVNMYKKCGRIERASRVFVEMSTR-TLISWTSMITG 463
V +V+++ + G ++ A R+ +M R I W ++++G
Sbjct: 448 RTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/559 (33%), Positives = 319/559 (57%), Gaps = 15/559 (2%)
Query: 97 HAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQP 156
HA +VK S D +V T LV +Y K G +E+ KVF +P N +W++++SGY +
Sbjct: 141 HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRV 200
Query: 157 ELAIHVF---LDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVG 213
E AI VF L E G+ ++ L++ ++ + LG+QIH +K ++
Sbjct: 201 EEAIKVFNLFLREKEEGS-DSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS 259
Query: 214 NSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQ 273
N+L ++YS C SLN A K F+ ++N ++W+ ++ +NGE+++ ++ FS+M S GI+
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 274 PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKL 333
P+E+T+ + + C + L G Q+HS +KLG+ +L +++ +Y K G + +A+K
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKG 379
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD + ++ W ++I+G+ Q D EAL ++ ++ ++G+ P+ T +S
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSD-----------NEEALILYRRMKTAGIIPNDPTMAS 428
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+L CS L LE G+Q+H T+K GF +V +G+AL MY KCG +E + VF +
Sbjct: 429 VLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKD 488
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SW +MI+G +++ +AL+LFE+ML G+ P+ VTFV ++ACS+ G V YF
Sbjct: 489 VVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFN 548
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
MM + + P +DHY C++D+ R G ++EA +FI+ + + +W + ++ C+ HG
Sbjct: 549 MMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKC 608
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
ELG YA E+L+ L ++ +Y L I+ + GR DV V R +S+ SWI +
Sbjct: 609 ELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
Query: 634 KDKVYSFKPNDGLHPQSAE 652
K++ + F D +HP E
Sbjct: 669 KNQYHVFVVGDTMHPMIEE 687
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 280/579 (48%), Gaps = 55/579 (9%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
TS+ + L +++L +H I++TG+ LVN Y KCG + +A +F
Sbjct: 13 HTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIF 72
Query: 133 DNLPRINVVSWTSLISGYVQN---SQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLE 189
+ + +VVSW SLI+GY QN S + +F +M P TL A SSL+
Sbjct: 73 NAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQ 132
Query: 190 SIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIG 249
S +G+Q HA VVK + D V SL +Y G + +K F + E+N +W+T++
Sbjct: 133 SSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 250 ACGENGEAVQGLRFFSKMLSEGIQ--PNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGY 307
G + ++ F+ L E + +++ T++ S + + +G Q+H + IK G
Sbjct: 193 GYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 308 ASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHN 367
+ + N+++ +Y KC ++EA K+FD N +TW+AM+ G++Q N
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQ------------N 300
Query: 368 GGT-EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHALTLKTGFLSDVVVG 426
G + EA+ +FS++ S+G+KP YT +L CS + LE+G+Q+H+ LK GF +
Sbjct: 301 GESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFAT 360
Query: 427 TALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQALQLFEDMLLAGVR 486
TALV+MY K G + A + F + R + WTS+I+G+ +S + +AL L+ M AG+
Sbjct: 361 TALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGII 420
Query: 487 PNQVTFVGALAACSNAGMV----------------------------YEALGYFEMMQKE 518
PN T L ACS+ + Y G E
Sbjct: 421 PNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLV 480
Query: 519 YKIKPVMD--HYMCLIDMFVRLGCIEEAFDFIKKM---DFEPNEVIWSVFIAGCRRHGNM 573
++ P D + +I G +EA + ++M EP++V + I+ C G +
Sbjct: 481 FRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFV 540
Query: 574 ELGFYAAEQL---LKLKPKDCESYAMLLDIFVSAGRWED 609
E G++ + + L PK + YA ++D+ AG+ ++
Sbjct: 541 ERGWFYFNMMSDQIGLDPK-VDHYACMVDLLSRAGQLKE 578
Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 212/426 (49%), Gaps = 22/426 (5%)
Query: 173 PTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKA 232
P TL LT S ++ G+ +H +++ N L + Y+ CG L A
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 233 FNRIREKNVMSWTTVIGACGENG---EAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTM 289
FN I K+V+SW ++I +NG + ++ F +M ++ I PN +TL I ++
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 290 LSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMI 349
S VG Q H+L +K+ ++ V S++ +Y K GLV++ K+F M N TW+ M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 350 AGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+G+A + + + ++F + G D Y F+++L+ + + + G Q
Sbjct: 192 SGYATRGRVEE--------AIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQ 242
Query: 410 IHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSL 469
IH +T+K G L V + ALV MY KC + A ++F R I+W++M+TG++ +
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 470 SHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYM 529
S +A++LF M AG++P++ T VG L ACS+ + E + K + +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK-LGFERHLFATT 361
Query: 530 CLIDMFVRLGCIEEA---FDFIKKMDFEPNEVIWSVFIAGCRRHGNME--LGFYAAEQLL 584
L+DM+ + GC+ +A FD +++ D +W+ I+G ++ + E L Y +
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQERDV----ALWTSLISGYVQNSDNEEALILYRRMKTA 417
Query: 585 KLKPKD 590
+ P D
Sbjct: 418 GIIPND 423
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 222/429 (51%), Gaps = 25/429 (5%)
Query: 96 IHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQ 155
IH +K G + LV +Y KC ++ EA K+FD+ N ++W+++++GY QN +
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 156 PELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNS 215
A+ +F M AG P+ T+ L ACS + + GKQ+H++++K E +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA 362
Query: 216 LCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPN 275
L +Y+ G L A K F+ ++E++V WT++I +N + + L + +M + GI PN
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPN 422
Query: 276 EFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFD 335
+ T+ S+ C ++ +L +G QVH IK G+ + + +++ +Y KCG +++ +F
Sbjct: 423 DPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFR 482
Query: 336 GMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNG-GTEALSIFSKLNSSGMKPDLYTFSSI 394
+ ++V+WNAMI+G +HNG G EAL +F ++ + GM+PD TF +I
Sbjct: 483 RTPNKDVVSWNAMISG------------LSHNGQGDEALELFEEMLAEGMEPDDVTFVNI 530
Query: 395 LTICSRLVALEQGE-QIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMST-- 451
++ CS +E+G + ++ + G V +V++ + G+++ A + F+E +
Sbjct: 531 ISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA-KEFIESANID 589
Query: 452 RTLISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY 511
L W +++ NH + E ++ G R + T+V +Y ALG
Sbjct: 590 HGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESS-TYV-------QLSGIYTALGR 641
Query: 512 FEMMQKEYK 520
+++ +K
Sbjct: 642 MRDVERVWK 650
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 128/222 (57%)
Query: 65 VLTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGN 124
+ + G K + V +L C + L + +H+ ++K G + F T LV++Y K G
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 125 MEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
+ +A+K FD L +V WTSLISGYVQNS E A+ ++ M AG P + T+ + L A
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKA 432
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
CSSL ++ LGKQ+H + +K+ + +G++L ++YS CGSL F R K+V+SW
Sbjct: 433 CSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSW 492
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVC 286
+I NG+ + L F +ML+EG++P++ T +I S C
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISAC 534
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 13/246 (5%)
Query: 67 TEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNME 126
T G + S+L+ C + +L + +H H +K G + + + L +Y KCG++E
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 127 EAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACS 186
+ VF P +VVSW ++ISG N Q + A+ +F +ML G P +VT ++ACS
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 187 SLESIRLGKQIHAYVVKYQTEDDTSVGNSLC--SLYSTCGSLNSAIKAFNRIREKNVMS- 243
+ G + ++ Q D V + C L S G L A K F I N+
Sbjct: 536 HKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEA-KEF--IESANIDHG 591
Query: 244 ---WTTVIGACGENGEAVQGLRFFSKMLSEGIQPNE--FTLTSISSVCGTMLSL-RVGAQ 297
W ++ AC +G+ G+ K+++ G + + L+ I + G M + RV
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 298 VHSLGI 303
+ + G+
Sbjct: 652 MRANGV 657
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/587 (35%), Positives = 326/587 (55%), Gaps = 24/587 (4%)
Query: 177 TLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI 236
+L A+ +C S+E RL +H VVK + +G+ L Y G A K F+ +
Sbjct: 36 SLIAAVKSCVSIELCRL---LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 237 REKNVMSWTTVIGACGENGEAVQGLRFFSKML-SE-GIQPNEFTLTSISSVCGTMLSLRV 294
E++++SW ++I G + S+M+ SE G +PNE T S+ S C S
Sbjct: 93 PERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEE 152
Query: 295 GAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQ 354
G +H L +K G ++V N+ + Y K G + + KLF+ +S NLV+WN MI H Q
Sbjct: 153 GRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQ 212
Query: 355 MMDLAKDDLSAHNGGTE-ALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIHAL 413
NG E L+ F+ G +PD TF ++L C + + + IH L
Sbjct: 213 ------------NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGL 260
Query: 414 TLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSHQA 473
+ GF + + TAL+++Y K GR+E +S VF E+++ ++WT+M+ +A H A
Sbjct: 261 IMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDA 320
Query: 474 LQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCLID 533
++ FE M+ G+ P+ VTF L ACS++G+V E YFE M K Y+I P +DHY C++D
Sbjct: 321 IKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVD 380
Query: 534 MFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNMELGFYAAEQLLKLKPKDCES 593
+ R G +++A+ IK+M EP+ +W + CR + + +LG AAE+L +L+P+D +
Sbjct: 381 LLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRN 440
Query: 594 YAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQSAEI 653
Y ML +I+ ++G W+D + ++NL +++ L S+I +K++ F D HP+S +I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Query: 654 FKVLDELVEKAKC-FGYKQQESFELTD-----EESASVYHSEKLAIAFGLLNTPIVSPIL 707
K L E+ +K K GYK + F L D +E HSEK+A+AFGLL + PI+
Sbjct: 501 QKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPII 560
Query: 708 VVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLHKFVNGHCTCRDF 754
+ K+ +C DCH K I+ + R II+RDSKR H F++G C+C D+
Sbjct: 561 IRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDY 607
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 171/339 (50%), Gaps = 16/339 (4%)
Query: 73 QTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKVF 132
SS ++ ++ CV S+ ++H +VK+ S++ F+ LV Y + G+ A+K+F
Sbjct: 33 NVSSLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLF 89
Query: 133 DNLPRINVVSWTSLISGYVQNSQPELAIHVFLDML--EAGNYPTNVTLGTALTACSSLES 190
D +P ++VSW SLISGY V M+ E G P VT + ++AC S
Sbjct: 90 DEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 191 IRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGA 250
G+ IH V+K+ ++ V N+ + Y G L S+ K F + KN++SW T+I
Sbjct: 150 KEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 251 CGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASN 310
+NG A +GL +F+ G +P++ T ++ C M +R+ +H L + G++ N
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 311 LRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGT 370
+ +++ LY K G ++++ +F ++ + + W AM+A +A H G
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYA-----------THGFGR 318
Query: 371 EALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQ 409
+A+ F + G+ PD TF+ +L CS +E+G+
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 2/185 (1%)
Query: 69 GPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEA 128
G + ++++++L+ C + + A+ IH I+ G + + T L+++Y K G +E++
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 129 QKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSL 188
VF + + ++WT++++ Y + AI F M+ G P +VT L ACS
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 189 ESIRLGKQIHAYVVK-YQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRI-REKNVMSWTT 246
+ GK + K Y+ + + + L G L A + E + W
Sbjct: 350 GLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 247 VIGAC 251
++GAC
Sbjct: 410 LLGAC 414
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 339/617 (54%), Gaps = 33/617 (5%)
Query: 72 VQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNMEEAQKV 131
V S Y S+L+ C L +HAH +K+ D V T +++Y KC NM++AQ +
Sbjct: 279 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 338
Query: 132 FDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTACSSLESI 191
FDN +N S+ ++I+GY Q A+ +F ++ +G ++L AC+ ++ +
Sbjct: 339 FDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 398
Query: 192 RLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSWTTVIGAC 251
G QI+ +K D V N+ +Y C +L A + F+ +R ++ +SW +I A
Sbjct: 399 SEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 458
Query: 252 GENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIKLGYASNL 311
+NG+ + L F ML I+P+EFT SI C T SL G ++HS +K G ASN
Sbjct: 459 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKAC-TGGSLGYGMEIHSSIVKSGMASNS 517
Query: 312 RVRNSIMYLYLKCGLVDEAQKL----------------FDGMSHVNL----VTWNAMIAG 351
V S++ +Y KCG+++EA+K+ + M + L V+WN++I+G
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISG 577
Query: 352 HAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQIH 411
+ M + ++D A +F+++ G+ PD +T++++L C+ L + G+QIH
Sbjct: 578 YV-MKEQSED----------AQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 412 ALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLSH 471
A +K SDV + + LV+MY KCG + + +F + R ++W +MI G+A+H
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 472 QALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFEMMQKEYKIKPVMDHYMCL 531
+A+QLFE M+L ++PN VTF+ L AC++ G++ + L YF MM+++Y + P + HY +
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 532 IDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRH-GNMELGFYAAEQLLKLKPKD 590
+D+ + G ++ A + I++M FE ++VIW + C H N+E+ A LL+L P+D
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 591 CESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRIKDKVYSFKPNDGLHPQS 650
+Y +L +++ AG WE V+ ++ R KL + SW+ +KD+++ F D HP+
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRW 866
Query: 651 AEIFKVLDELVEKAKCF 667
EI++ L + + K F
Sbjct: 867 EEIYEELGLIYSEMKPF 883
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 259/557 (46%), Gaps = 56/557 (10%)
Query: 22 SSSLATLKDKNHTVSYQRSGSKLIQLNGNSEPVRSLGFQEALSVLTEGPKVQTSSYVSLL 81
+ SL L VS+ R ++ I R F L + V T+++ +
Sbjct: 2 AESLRLLHMTRSVVSFNRCLTEKISYR------RVPSFSYFTDFLNQVNSVSTTNFSFVF 55
Query: 82 QECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFL-------------------------- 115
+EC + +L + HAH++ +G FV+ L
Sbjct: 56 KECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVV 115
Query: 116 -----VNVYGKCGNMEEAQKVFDNLPRINVVSWTSLISGYVQNSQPELAIHVFLDMLEAG 170
+N Y K +M +A F+ +P +VVSW S++SGY+QN + +I VF+DM G
Sbjct: 116 SWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 171 NYPTNVTLGTALTACSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAI 230
T L CS LE LG QIH VV+ + D ++L +Y+ ++
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 231 KAFNRIREKNVMSWTTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTML 290
+ F I EKN +SW+ +I C +N L+FF +M ++ S+ C +
Sbjct: 236 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 295
Query: 291 SLRVGAQVHSLGIKLGYASNLRVRNSIMYLYLKCGLVDEAQKLFDGMSHVNLVTWNAMIA 350
LR+G Q+H+ +K +A++ VR + + +Y KC + +AQ LFD ++N ++NAMI
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 351 GHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSSILTICSRLVALEQGEQI 410
G++Q G +AL +F +L SSG+ D + S + C+ + L +G QI
Sbjct: 356 GYSQ-----------EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 411 HALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRTLISWTSMITGFANHSLS 470
+ L +K+ DV V A ++MY KC + A RVF EM R +SW ++I +
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 471 HQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGY-FEMMQKEYKIKPVMDHYM 529
++ L LF ML + + P++ TF L AC+ +LGY E+ K + +
Sbjct: 465 YETLFLFVSMLRSRIEPDEFTFGSILKACTGG-----SLGYGMEIHSSIVKSGMASNSSV 519
Query: 530 --CLIDMFVRLGCIEEA 544
LIDM+ + G IEEA
Sbjct: 520 GCSLIDMYSKCGMIEEA 536
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/732 (29%), Positives = 363/732 (49%), Gaps = 54/732 (7%)
Query: 66 LTEGPKVQTSSYVSLLQECVNRKSLSNAEIIHAHIVKTGSHQDFFVMTFLVNVYGKCGNM 125
+T P + +++ ++L++ KSL++ + +HAHI++T + F ++V N+
Sbjct: 1 MTLPPPIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINL 60
Query: 126 EEAQKVFDNLPRI-NVVSWTSLISGYVQNSQPELAIHVFLDMLEAGNYPTNVTLGTALTA 184
A VF ++P + + + ++S+P I + + G + L A
Sbjct: 61 SYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA 120
Query: 185 CSSLESIRLGKQIHAYVVKYQTEDDTSVGNSLCSLYSTCGSLNSAIKAFNRIREKNVMSW 244
S + ++ G ++H K T D V +Y++CG +N A F+ + ++V++W
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 245 TTVIGACGENGEAVQGLRFFSKMLSEGIQPNEFTLTSISSVCGTMLSLRVGAQVHSLGIK 304
T+I G + + F +M + P+E L +I S CG ++R ++ I+
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 305 --------------LGYAS-----------------NLRVRNSIMYLYLKCGLVDEAQKL 333
YA NL V +++ Y KCG +D+AQ +
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVI 300
Query: 334 FDGMSHVNLVTWNAMIAGHAQMMDLAKDDLSAHNGGTEALSIFSKLNSSGMKPDLYTFSS 393
FD +LV W MI+ + + + EAL +F ++ SG+KPD+ + S
Sbjct: 301 FDQTEKKDLVCWTTMISAYVE-----------SDYPQEALRVFEEMCCSGIKPDVVSMFS 349
Query: 394 ILTICSRLVALEQGEQIHALTLKTGFLSDVVVGTALVNMYKKCGRIERASRVFVEMSTRT 453
+++ C+ L L++ + +H+ G S++ + AL+NMY KCG ++ VF +M R
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 454 LISWTSMITGFANHSLSHQALQLFEDMLLAGVRPNQVTFVGALAACSNAGMVYEALGYFE 513
++SW+SMI + H + AL LF M V PN+VTFVG L CS++G+V E F
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 514 MMQKEYKIKPVMDHYMCLIDMFVRLGCIEEAFDFIKKMDFEPNEVIWSVFIAGCRRHGNM 573
M EY I P ++HY C++D+F R + EA + I+ M N VIW ++ CR HG +
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 574 ELGFYAAEQLLKLKPKDCESYAMLLDIFVSAGRWEDVAVVKNLTREEKLSETDDWSWIRI 633
ELG +AA+++L+L+P + ++ +I+ RWEDV ++ + E+ + + S I
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Query: 634 KDKVYSFKPNDGLHPQSAEIFKVLDELVEKAKCFGYKQQESFELTDEESAS-----VYHS 688
K + F D H QS EI+ LDE+V K K GY L D E ++HS
Sbjct: 590 NGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHS 649
Query: 689 EKLAIAFGLLN------TPIVSPILVVKSTTMCRDCHNFIKIITSLTAREIIVRDSKRLH 742
EKLA+ FGL+N I +VK+ +C DCH F K+++ + REIIVRD R H
Sbjct: 650 EKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFH 709
Query: 743 KFVNGHCTCRDF 754
+ NG C+CRD+
Sbjct: 710 CYKNGLCSCRDY 721
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 260,963,782
Number of Sequences: 539616
Number of extensions: 10314551
Number of successful extensions: 32510
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 24364
Number of HSP's gapped (non-prelim): 2169
length of query: 758
length of database: 191,569,459
effective HSP length: 125
effective length of query: 633
effective length of database: 124,117,459
effective search space: 78566351547
effective search space used: 78566351547
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)