Citrus Sinensis ID: 004371

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------76

MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPVGKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL

cccccEEEEEccEEEEccEEEEccccccEEEcccccccccEEEEEcccccccccEEEEEcccccccEEEEEEEEccccccccccccccccccccEEEEEEEcccccccccccccccccEEEEEEEEEEcccEEEEEEccccccEEEEEEccccccccccccEEEEEEEcccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEEEHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEcccHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccEEEEccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEEEEcccEEEEcccccccccccccEEEEEEccccccccccccccccccEEEEEEEccEEEEccccccEEEEEEcccEEEEEEEEEEEcccccEEEEEEEcccccccccEEEEEEEEcccEEEEEEEEccEEEEEEEcccccEEEEccEEEEEEEEcccEEEEEEEEcccccccEEEEEEEc

ccccccEEEcccEEEEccEEEEccccccEEEEccccccccccEEEEEccccccccEEEEcccccccEEEEEEEEEEEEHccccccccccccccEEEEEEEcccccccccccccccccccEEEEEEEEccccEEEEEEcccccEEEEEEEccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHHccccHHHHccccccHHHHHccccHHHHHHHHHHHHHcccccEEEEEEccccEcccccccccHHHHcHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEEHHHHccccccccccccHHHccccEEccccccccccccccHcHcHHHccccccccHHHHHHHHHHHHHHHHHccccEEEEcHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccEEEHcccccHHHccccccEEEEccccccccccccccHHHHHHHHHHHHHHccEcccccccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHccccccEEEcccccccccHHccccccccccEEEEEEEcccccEEEEEEEccccccccccccccccccccccEEEEEcHHHcccccccccccccccEEEEEEcccEEEEEcccccEEEEEccccEEEEEEEEEEEcccccEEEEEEEHHccccccEEEEEEEcccccEEEEEEEEEccEEEEEEcccccEEEEccEEEEEEEccccEEEEEEccccccccEEEEEEEEc

mtvgagisvsdgnlmvKGSCVLANVKENivvtpaaggalvdgafigvtsdqlgsrrvfpvgklegLRFMCVFRFKMWWMTQrmgncgqdvpfETQFLVVEAregshfdegsqygeeqSALYTVFLPILEGDFRAVLQGNEQNELEIClesgdpdvdefegsHLVFVaagsdpfdVITNAVKTVERHLLTFShrerkkmpdmlnwfgwctwdafytdvtgeGVKQGLEsfekggippkfiiiddgwqsvgmdpsgfefradnTANFANRLTHIKENhkfqkngkegqreedpalGLRHIVTEIKEKHDLKYVYVWHAITgywggvrpgvtgmehyeskmqypvsspgvqsnepcdafDSIAknglglvnpekvFHFYDELHSYLASAGIDGVKVDVQNILETlgaghggrvkLSRKYHQALEASIARNfrnndiiccmshntdglysAKRSAVirasddfwprdpashtiHIASVAYNTIflgefmqpdwdmfhslhpmaeYHGAARAVGgcaiyvsdkpgqhdfnllrklvlpdgsilraklpgrptrdclfsdpardgkslLKIWnlndftgvvgvfncqgagwcrvgkknlihdeqpgtttgfirakdvdylprvagdewtgDAIAYshlggevaylpknatlpitlksreyeVYTVvpvkelssgtrfapiglvkmfnsggaikelryesegtatVDMKVrgcgefgayssarprriavdseevqfgyeeesglvtltlrvpkeelYLWNISFEL

mtvgagisvsdgnlmVKGSCVLANVKENIVVTPAAGGALVDGAFIgvtsdqlgsrrvfpvgklegLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLltfshrerkkmpDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIkenhkfqkngkegqreedpalGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETlgaghggrvkLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSilraklpgrptrdclFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLihdeqpgtttgfirakdVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVvpvkelssgtrfapiglVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFgayssarprriAVDSEEvqfgyeeesglvtltlrvpkeelylwnisfel

********VSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPVGKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHF*****YGEEQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTH*********************LGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHY******************CDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISF**

****AGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAF**********RRVFPVGKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLLTF*HRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENH**************PALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTG*EHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL

MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPVGKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKF***********DPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL

**VGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPVGKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEARE************EQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		758	2.2.26 [Sep-21-2011]
Q84VX0		754	Probable galactinol--sucr	yes	no	0.992	0.997	0.756	0.0
Q94A08		773	Probable galactinol--sucr	no	no	0.982	0.963	0.610	0.0
Q8RX87		749	Probable galactinol--sucr	no	no	0.982	0.994	0.556	0.0
Q9FND9		783	Probable galactinol--sucr	no	no	0.940	0.910	0.390	1e-155
Q5VQG4		783	Galactinol--sucrose galac	no	no	0.930	0.900	0.397	1e-149
Q8VWN6		798	Galactinol--sucrose galac	N/A	no	0.886	0.842	0.394	1e-145
Q93XK2		853	Stachyose synthase OS=Pis	N/A	no	0.941	0.837	0.331	1e-126
Q9SYJ4		876	Probable galactinol--sucr	no	no	0.569	0.493	0.395	1e-89
Q97U94		648	Alpha-galactosidase OS=Su	yes	no	0.472	0.552	0.293	3e-39

>sp\|Q84VX0\|RFS1_ARATH Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1	Back alignment and function desciption

 Score = 1170 bits (3028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/759 (75%), Positives = 652/759 (85%), Gaps = 7/759 (0%)

Query: 1   MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPV 60
           MTVGAGISV+D +L+V G  VL  V EN++VTPA+G AL+DGAFIGVTSDQ GS RVF +
Sbjct: 1   MTVGAGISVTDSDLVVLGHRVLHGVPENVLVTPASGNALIDGAFIGVTSDQTGSHRVFSL 60

Query: 61  GKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSAL 120
           GKLE LRFMCVFRFK+WWMTQRMG  G+++P ETQFL+VEA +GS        G +QS+ 
Sbjct: 61  GKLEDLRFMCVFRFKLWWMTQRMGTNGKEIPCETQFLIVEANQGSDLG-----GRDQSSS 115

Query: 121 YTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAV 180
           Y VFLPILEGDFRAVLQGNE NELEICLESGDP VD+FEGSHLVFVAAGSDPFDVIT AV
Sbjct: 116 YVVFLPILEGDFRAVLQGNEANELEICLESGDPTVDQFEGSHLVFVAAGSDPFDVITKAV 175

Query: 181 KTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFII 240
           K VE+HL TFSHRERKKMPDMLNWFGWCTWDAFYT+VT + VKQGLES + GG+ PKF+I
Sbjct: 176 KAVEQHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVI 235

Query: 241 IDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVT 300
           IDDGWQSVGMD +  EF ADN ANFANRLTHIKENHKFQK+GKEG R +DP+L L H++T
Sbjct: 236 IDDGWQSVGMDETSVEFNADNAANFANRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVIT 295

Query: 301 EIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIA 360
           +IK  + LKYVYVWHAITGYWGGV+PGV+GMEHYESK+ YPVSSPGV S+E C   +SI 
Sbjct: 296 DIKSNNSLKYVYVWHAITGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESIT 355

Query: 361 KNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQAL 420
           KNGLGLVNPEKVF FY++LHSYLAS G+DGVKVDVQNILETLGAGHGGRVKL++KYHQAL
Sbjct: 356 KNGLGLVNPEKVFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQAL 415

Query: 421 EASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF 480
           EASI+RNF +N II CMSHNTDGLYSAK++AVIRASDDFWPRDPASHTIHIASVAYNT+F
Sbjct: 416 EASISRNFPDNGIISCMSHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLF 475

Query: 481 LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRA 540
           LGEFMQPDWDMFHSLHPMAEYH AARAVGGCAIYVSDKPGQHDFNLLRKLVL DGSILRA
Sbjct: 476 LGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRA 535

Query: 541 KLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPG 600
           KLPGRPT DC FSDP RD KSLLKIWNLN+FTGV+GVFNCQGAGWC+  K+ LIHD++PG
Sbjct: 536 KLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPG 595

Query: 601 TTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVV 660
           T +G +R  DV YL +VA  EWTGD+I YSHL GE+ YLPK+ +LP+TL  REYEV+TVV
Sbjct: 596 TISGCVRTNDVHYLHKVAAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVV 655

Query: 661 PVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTA-TVDMKVRGCGEFGAYSSA-RPR 718
           PVKE S G++FAP+GL++MFNSGGAI  LRY+ EGT   V MK+RG G  G YSS  RPR
Sbjct: 656 PVKEFSDGSKFAPVGLMEMFNSGGAIVSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPR 715

Query: 719 RIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFE 757
            + VDS++V++ YE ESGLVT TL VP++ELYLW++  +
Sbjct: 716 SVTVDSDDVEYRYEPESGLVTFTLGVPEKELYLWDVVIQ 754

Transglycosidase operating by a ping-pong reaction mechanism. Involved in the synthesis of raffinose, a major soluble carbohydrate in seeds, roots and tubers.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 8EC: 2

>sp\|Q94A08\|RFS2_ARATH Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2	Back alignment and function description

>sp\|Q8RX87\|RFS6_ARATH Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2	Back alignment and function description

>sp\|Q9FND9\|RFS5_ARATH Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1	Back alignment and function description

>sp\|Q5VQG4\|RFS_ORYSJ Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q8VWN6\|RFS_PEA Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1	Back alignment and function description

>sp\|Q93XK2\|STSYN_PEA Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1	Back alignment and function description

>sp\|Q9SYJ4\|RFS4_ARATH Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=3	Back alignment and function description

>sp\|Q97U94\|AGAL_SULSO Alpha-galactosidase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=galS PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		758
224122300		754	predicted protein [Populus trichocarpa]	0.994	1.0	0.853	0.0
118487822		754	unknown [Populus trichocarpa]	0.994	1.0	0.853	0.0
255579562		758	Stachyose synthase precursor, putative [	1.0	1.0	0.839	0.0
225462058		758	PREDICTED: probable galactinol--sucrose	1.0	1.0	0.825	0.0
356552396		755	PREDICTED: probable galactinol--sucrose	0.996	1.0	0.791	0.0
350536529		756	alkaline alpha-galactosidase seed imbibi	0.994	0.997	0.781	0.0
357495237		760	Alkaline alpha galactosidase I [Medicago	1.0	0.997	0.782	0.0
356501667		755	PREDICTED: probable galactinol--sucrose	0.996	1.0	0.782	0.0
449456639		828	PREDICTED: probable galactinol--sucrose	0.993	0.909	0.767	0.0
87128422		753	alkaline alpha galactosidase I [Cucumis	0.993	1.0	0.767	0.0

>gi\|224122300\|ref\|XP_002330589.1\| predicted protein [Populus trichocarpa] gi\|222872147\|gb\|EEF09278.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1365 bits (3532), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/758 (85%), Positives = 697/758 (91%), Gaps = 4/758 (0%)

Query: 1   MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPV 60
           MTVGAGISV+D  L+V G+CVL +V +NI +TPA+GG  ++GAFIGV SDQ+G RRVFPV
Sbjct: 1   MTVGAGISVADRKLVVLGNCVLNDVHDNIEITPASGGGFINGAFIGVRSDQVGCRRVFPV 60

Query: 61  GKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSAL 120
           GKLEGLRFMCVFRFKMWWMTQRMGNCGQ++PFETQFL+VEAR+GS FD G    EEQSAL
Sbjct: 61  GKLEGLRFMCVFRFKMWWMTQRMGNCGQEIPFETQFLIVEARDGSRFDNG----EEQSAL 116

Query: 121 YTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAV 180
           YTVFLPILEGDFRAVLQGNE NELEICLESGDP V EFEGSHLVFVAAGSDPFDVITNAV
Sbjct: 117 YTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVKEFEGSHLVFVAAGSDPFDVITNAV 176

Query: 181 KTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFII 240
           K VE HL TFSHRERKKMPDMLNWFGWCTWDAFYTDVT EGVKQGLESFEKGGIPPKF+I
Sbjct: 177 KAVESHLQTFSHRERKKMPDMLNWFGWCTWDAFYTDVTAEGVKQGLESFEKGGIPPKFVI 236

Query: 241 IDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVT 300
           IDDGWQSVGMDP+G E  ADN+ANFANRLTHIKENHKFQKNGKEG R EDPALGL H VT
Sbjct: 237 IDDGWQSVGMDPTGIETLADNSANFANRLTHIKENHKFQKNGKEGYRVEDPALGLTHTVT 296

Query: 301 EIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIA 360
           EIKE+HDLKYVYVWHAITGYWGGVRPG   MEHYE K+ YP+SSPGV+SNE CDAF SIA
Sbjct: 297 EIKERHDLKYVYVWHAITGYWGGVRPGGAEMEHYEPKLTYPISSPGVESNEHCDAFKSIA 356

Query: 361 KNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQAL 420
            NGLGLVNPEKVF FYDELH YL+SAGIDGVKVDVQNILETLGAGHGGRVKL+RKYHQAL
Sbjct: 357 TNGLGLVNPEKVFRFYDELHHYLSSAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQAL 416

Query: 421 EASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF 480
           EASIARNFR+N II CMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF
Sbjct: 417 EASIARNFRDNGIIYCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF 476

Query: 481 LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRA 540
           LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLL+KLVLPDGSILRA
Sbjct: 477 LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRA 536

Query: 541 KLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPG 600
           KLPGRPTRDCLFSDPARDGKSLLKIWNLNDF GV+GVFNCQGAGWCRVGK NLIHDE PG
Sbjct: 537 KLPGRPTRDCLFSDPARDGKSLLKIWNLNDFNGVIGVFNCQGAGWCRVGKTNLIHDENPG 596

Query: 601 TTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVV 660
           T TG +RAKDVDYLPRVA D WTGD++ YSH+GGEV YLPK+A +P+TLKSREYEV+TVV
Sbjct: 597 TITGSVRAKDVDYLPRVACDGWTGDSVLYSHVGGEVVYLPKDAGMPLTLKSREYEVFTVV 656

Query: 661 PVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRI 720
           PVKEL++G +FAP+GLVKMFNSGGAIKEL+Y+S  TATV MK RGCG FGAYSSA+P+RI
Sbjct: 657 PVKELANGVKFAPVGLVKMFNSGGAIKELQYDSSTTATVSMKARGCGLFGAYSSAQPKRI 716

Query: 721 AVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL 758
           +VDS+EV+FG+EE +GLVT+ LRVP+EELYLWNI+ EL
Sbjct: 717 SVDSKEVEFGFEEGTGLVTIDLRVPEEELYLWNITVEL 754

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|118487822\|gb\|ABK95734.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|255579562\|ref\|XP_002530623.1\| Stachyose synthase precursor, putative [Ricinus communis] gi\|223529833\|gb\|EEF31766.1\| Stachyose synthase precursor, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|225462058\|ref\|XP_002275829.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 1 [Vitis vinifera] gi\|296089998\|emb\|CBI39817.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356552396\|ref\|XP_003544554.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|350536529\|ref\|NP_001234763.1\| alkaline alpha-galactosidase seed imbibition protein [Solanum lycopersicum] gi\|23452226\|gb\|AAN32954.1\| alkaline alpha-galactosidase seed imbibition protein [Solanum lycopersicum]	Back alignment and taxonomy information

>gi\|357495237\|ref\|XP_003617907.1\| Alkaline alpha galactosidase I [Medicago truncatula] gi\|355519242\|gb\|AET00866.1\| Alkaline alpha galactosidase I [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356501667\|ref\|XP_003519645.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|449456639\|ref\|XP_004146056.1\| PREDICTED: probable galactinol--sucrose galactosyltransferase 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|87128422\|gb\|AAZ81424.2\| alkaline alpha galactosidase I [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		758
TAIR\|locus:2020452		754	SIP1 "AT1G55740" [Arabidopsis	0.988	0.993	0.761	0.0
TAIR\|locus:2103488		773	SIP2 "AT3G57520" [Arabidopsis	0.897	0.879	0.640	5.5e-270
TAIR\|locus:2170528		783	SIP1 "AT5G40390" [Arabidopsis	0.941	0.911	0.401	3.1e-147
UNIPROTKB\|Q5VQG4		783	RFS "Galactinol--sucrose galac	0.927	0.897	0.402	6.5e-138
UNIPROTKB\|Q93XK2		853	STS1 "Stachyose synthase" [Pis	0.577	0.513	0.391	9.4e-122
TAIR\|locus:2141425		876	STS "AT4G01970" [Arabidopsis t	0.583	0.504	0.360	4.7e-116
ASPGD\|ASPL0000010056		863	aglF [Emericella nidulans (tax	0.515	0.453	0.291	5.7e-40
UNIPROTKB\|Q97U94		648	galS "Alpha-galactosidase" [Su	0.250	0.293	0.336	1.7e-29
UNIPROTKB\|G4NBB7		908	MGG_11554 "Seed imbibition pro	0.387	0.323	0.309	6.9e-29
UNIPROTKB\|Q8A170		693	BT_3797 "Possible alpha-galact	0.250	0.274	0.274	4.4e-20

TAIR\|locus:2020452 SIP1 "AT1G55740" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 3121 (1103.7 bits), Expect = 0., P = 0.
 Identities = 576/756 (76%), Positives = 653/756 (86%)

Query:     1 MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPV 60
             MTVGAGISV+D +L+V G  VL  V EN++VTPA+G AL+DGAFIGVTSDQ GS RVF +
Sbjct:     1 MTVGAGISVTDSDLVVLGHRVLHGVPENVLVTPASGNALIDGAFIGVTSDQTGSHRVFSL 60

Query:    61 GKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSAL 120
             GKLE LRFMCVFRFK+WWMTQRMG  G+++P ETQFL+VEA +GS  D G   G +QS+ 
Sbjct:    61 GKLEDLRFMCVFRFKLWWMTQRMGTNGKEIPCETQFLIVEANQGS--DLG---GRDQSSS 115

Query:   121 YTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAV 180
             Y VFLPILEGDFRAVLQGNE NELEICLESGDP VD+FEGSHLVFVAAGSDPFDVIT AV
Sbjct:   116 YVVFLPILEGDFRAVLQGNEANELEICLESGDPTVDQFEGSHLVFVAAGSDPFDVITKAV 175

Query:   181 KTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFII 240
             K VE+HL TFSHRERKKMPDMLNWFGWCTWDAFYT+VT + VKQGLES + GG+ PKF+I
Sbjct:   176 KAVEQHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVI 235

Query:   241 IDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVT 300
             IDDGWQSVGMD +  EF ADN ANFANRLTHIKENHKFQK+GKEG R +DP+L L H++T
Sbjct:   236 IDDGWQSVGMDETSVEFNADNAANFANRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVIT 295

Query:   301 EIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIA 360
             +IK  + LKYVYVWHAITGYWGGV+PGV+GMEHYESK+ YPVSSPGV S+E C   +SI 
Sbjct:   296 DIKSNNSLKYVYVWHAITGYWGGVKPGVSGMEHYESKVAYPVSSPGVMSSENCGCLESIT 355

Query:   361 KNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQAL 420
             KNGLGLVNPEKVF FY++LHSYLAS G+DGVKVDVQNILETLGAGHGGRVKL++KYHQAL
Sbjct:   356 KNGLGLVNPEKVFSFYNDLHSYLASVGVDGVKVDVQNILETLGAGHGGRVKLAKKYHQAL 415

Query:   421 EASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF 480
             EASI+RNF +N II CMSHNTDGLYSAK++AVIRASDDFWPRDPASHTIHIASVAYNT+F
Sbjct:   416 EASISRNFPDNGIISCMSHNTDGLYSAKKTAVIRASDDFWPRDPASHTIHIASVAYNTLF 475

Query:   481 LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRA 540
             LGEFMQPDWDMFHSLHPMAEYH AARAVGGCAIYVSDKPGQHDFNLLRKLVL DGSILRA
Sbjct:   476 LGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLRKLVLRDGSILRA 535

Query:   541 KLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPG 600
             KLPGRPT DC FSDP RD KSLLKIWNLN+FTGV+GVFNCQGAGWC+  K+ LIHD++PG
Sbjct:   536 KLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPG 595

Query:   601 TTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVV 660
             T +G +R  DV YL +VA  EWTGD+I YSHL GE+ YLPK+ +LP+TL  REYEV+TVV
Sbjct:   596 TISGCVRTNDVHYLHKVAAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVV 655

Query:   661 PVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTA-TVDMKVRGCGEFGAYSSAR-PR 718
             PVKE S G++FAP+GL++MFNSGGAI  LRY+ EGT   V MK+RG G  G YSS R PR
Sbjct:   656 PVKEFSDGSKFAPVGLMEMFNSGGAIVSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPR 715

Query:   719 RIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNI 754
              + VDS++V++ YE ESGLVT TL VP++ELYLW++
Sbjct:   716 SVTVDSDDVEYRYEPESGLVTFTLGVPEKELYLWDV 751

GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

TAIR\|locus:2103488 SIP2 "AT3G57520" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2170528 SIP1 "AT5G40390" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5VQG4 RFS "Galactinol--sucrose galactosyltransferase" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

UNIPROTKB\|Q93XK2 STS1 "Stachyose synthase" [Pisum sativum (taxid:3888)]	Back alignment and assigned GO terms

TAIR\|locus:2141425 STS "AT4G01970" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000010056 aglF [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q97U94 galS "Alpha-galactosidase" [Sulfolobus solfataricus P2 (taxid:273057)]	Back alignment and assigned GO terms

UNIPROTKB\|G4NBB7 MGG_11554 "Seed imbibition protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

UNIPROTKB\|Q8A170 BT_3797 "Possible alpha-galactosidase" [Bacteroides thetaiotaomicron VPI-5482 (taxid:226186)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84VX0	RFS1_ARATH	2, ., 4, ., 1, ., 8, 2	0.7562	0.9920	0.9973	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		758
PLN02355		758	PLN02355, PLN02355, probable galactinol--sucrose g	0.0
PLN02219		775	PLN02219, PLN02219, probable galactinol--sucrose g	0.0
pfam05691		742	pfam05691, Raffinose_syn, Raffinose synthase or se	0.0
PLN02684		750	PLN02684, PLN02684, Probable galactinol--sucrose g	0.0
PLN02711		777	PLN02711, PLN02711, Probable galactinol--sucrose g	0.0
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	1e-131
PLN02982		865	PLN02982, PLN02982, galactinol-raffinose galactosy	2e-55
pfam02065		395	pfam02065, Melibiase, Melibiase	0.003

>gnl\|CDD\|215203 PLN02355, PLN02355, probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

 Score = 1566 bits (4056), Expect = 0.0
 Identities = 650/758 (85%), Positives = 702/758 (92%)

Query: 1   MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPV 60
           MTVGAGISV+DGNL+V G+ VL +V +N++VTPA+GGAL++GAFIGV SDQ+GSRRVFPV
Sbjct: 1   MTVGAGISVADGNLVVLGNRVLHDVHDNVLVTPASGGALINGAFIGVRSDQVGSRRVFPV 60

Query: 61  GKLEGLRFMCVFRFKMWWMTQRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSAL 120
           GKLE LRFMCVFRFK+WWMTQRMG CGQD+PFETQFL+VEAR+GSH   G + GE+QS++
Sbjct: 61  GKLEDLRFMCVFRFKLWWMTQRMGTCGQDIPFETQFLIVEARDGSHLGNGGEGGEDQSSV 120

Query: 121 YTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAV 180
           YTVFLPILEGDFRAVLQGNE NELEICLESGDP VDEFEGSHLVFVAAGSDPFDVITNAV
Sbjct: 121 YTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVDEFEGSHLVFVAAGSDPFDVITNAV 180

Query: 181 KTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFII 240
           K VE+HL TFSHRERKKMPDMLNWFGWCTWDAFYT+VT EGVKQGLES EKGG+ PKF+I
Sbjct: 181 KAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVI 240

Query: 241 IDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVT 300
           IDDGWQSVGMDP+G E  ADN+ANFANRLTHIKENHKFQKNGKEG R +DPALGL HIVT
Sbjct: 241 IDDGWQSVGMDPTGIECLADNSANFANRLTHIKENHKFQKNGKEGHRVDDPALGLGHIVT 300

Query: 301 EIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIA 360
           EIKEKH LKYVYVWHAITGYWGGV+PGV GMEHYESKM YPVSSPGVQSNEPCDA +SI 
Sbjct: 301 EIKEKHSLKYVYVWHAITGYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALESIT 360

Query: 361 KNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQAL 420
            NGLGLVNPEKVF FY+ELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKL+RKYHQAL
Sbjct: 361 TNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQAL 420

Query: 421 EASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF 480
           EASIARNF +N II CMSHNTDGLYSAKR+AVIRASDDFWPRDPASHTIHIASVAYNTIF
Sbjct: 421 EASIARNFPDNGIISCMSHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTIF 480

Query: 481 LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRA 540
           LGEFMQPDWDMFHSLHPMAEYH AARAVGGCAIYVSDKPGQHDFNLL+KLVLPDGSILRA
Sbjct: 481 LGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRA 540

Query: 541 KLPGRPTRDCLFSDPARDGKSLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPG 600
           KLPGRPTRDCLFSDPARDGKSLLKIWNLN+FTGV+GVFNCQGAGWCRVGKKNLIHDEQPG
Sbjct: 541 KLPGRPTRDCLFSDPARDGKSLLKIWNLNEFTGVIGVFNCQGAGWCRVGKKNLIHDEQPG 600

Query: 601 TTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLPKNATLPITLKSREYEVYTVV 660
           T TG IRAKDVDYLP+VA DEWTGD+I YSHLGGEV YLPK+A+LP+TLKSREYEV+TVV
Sbjct: 601 TITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEVVYLPKDASLPVTLKSREYEVFTVV 660

Query: 661 PVKELSSGTRFAPIGLVKMFNSGGAIKELRYESEGTATVDMKVRGCGEFGAYSSARPRRI 720
           PVKELS+G +FAPIGLVKMFNSGGAIKELRY+ +  ATV MKVRG G  GAYSS+RPRR+
Sbjct: 661 PVKELSNGVKFAPIGLVKMFNSGGAIKELRYDEDTNATVRMKVRGSGLVGAYSSSRPRRV 720

Query: 721 AVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL 758
            VDS+EV+F YEE SGLVT  L VP+EELYLWN++ EL
Sbjct: 721 TVDSKEVEFRYEEGSGLVTFDLGVPEEELYLWNVTVEL 758

Length = 758

>gnl\|CDD\|165863 PLN02219, PLN02219, probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

>gnl\|CDD\|218695 pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1	Back alignment and domain information

>gnl\|CDD\|166325 PLN02684, PLN02684, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215381 PLN02711, PLN02711, Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|215532 PLN02982, PLN02982, galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>gnl\|CDD\|216861 pfam02065, Melibiase, Melibiase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		758
PLN02219		775	probable galactinol--sucrose galactosyltransferase	100.0
PLN02355		758	probable galactinol--sucrose galactosyltransferase	100.0
PLN02684		750	Probable galactinol--sucrose galactosyltransferase	100.0
PLN02982		865	galactinol-raffinose galactosyltransferase/ghydrol	100.0
PLN02711		777	Probable galactinol--sucrose galactosyltransferase	100.0
PF05691		747	Raffinose_syn: Raffinose synthase or seed imbibiti	100.0
PLN02229		427	alpha-galactosidase	100.0
PLN02692		412	alpha-galactosidase	100.0
PLN02808		386	alpha-galactosidase	100.0
PLN03231		357	putative alpha-galactosidase; Provisional	100.0
PLN02899		633	alpha-galactosidase	100.0
KOG2366		414	consensus Alpha-D-galactosidase (melibiase) [Carbo	99.95
PF02065		394	Melibiase: Melibiase; InterPro: IPR000111 O-Glycos	99.93
COG3345		687	GalA Alpha-galactosidase [Carbohydrate transport a	99.88
cd06592		303	GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact	99.45
cd06593		308	GH31_xylosidase_YicI YicI alpha-xylosidase is a gl	99.22
PRK10658		665	putative alpha-glucosidase; Provisional	99.06
cd06598		317	GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide	98.84
cd06595		292	GH31_xylosidase_XylS-like This family represents a	98.84
PRK10426		635	alpha-glucosidase; Provisional	98.81
cd06591		319	GH31_xylosidase_XylS XylS is a glycosyl hydrolase	98.79
cd06599		317	GH31_glycosidase_Aec37 Glycosyl hydrolase family 3	98.76
cd06594		317	GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl	98.69
PF01055		441	Glyco_hydro_31: Glycosyl hydrolases family 31 ; In	98.61
cd06597		340	GH31_transferase_CtsY CtsY (cyclic tetrasaccharide	98.58
cd06589		265	GH31 The enzymes of glycosyl hydrolase family 31 (	98.57
cd06604		339	GH31_glucosidase_II_MalA Alpha-glucosidase II (alp	98.5
cd06602		339	GH31_MGAM_SI_GAA This family includes the followin	98.41
cd06600		317	GH31_MGAM-like This family includes the following	98.33
cd06601		332	GH31_lyase_GLase GLases (alpha-1,4-glucan lyases)	98.27
COG1501		772	Alpha-glucosidases, family 31 of glycosyl hydrolas	98.22
PLN02763		978	hydrolase, hydrolyzing O-glycosyl compounds	98.14
PF10566		273	Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro:	98.14
cd06603		339	GH31_GANC_GANAB_alpha This family includes the clo	98.13
KOG1065		805	consensus Maltase glucoamylase and related hydrola	96.78
TIGR01515		613	branching_enzym alpha-1,4-glucan:alpha-1,4-glucan	90.29
PF13200		316	DUF4015: Putative glycosyl hydrolase domain	87.16
cd06596		261	GH31_CPE1046 CPE1046 is an uncharacterized Clostri	80.82

>PLN02219 probable galactinol--sucrose galactosyltransferase 2	Back alignment and domain information

Probab=100.00  E-value=9.2e-220  Score=1844.94  Aligned_cols=750  Identities=63%  Similarity=1.153  Sum_probs=720.7

Q ss_pred             CcccceeEEeCCeEEEcCeeccccCCCceEEeecCCCCcccceeeecccCCCCceeeeecCCcccceEEEEeeecccccc
Q 004371            1 MTVGAGISVSDGNLMVKGSCVLANVKENIVVTPAAGGALVDGAFIGVTSDQLGSRRVFPVGKLEGLRFMCVFRFKMWWMT   80 (758)
Q Consensus         1 ~~~~~~~~~~~g~l~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~lG~~~~~r~~~~~r~k~~W~~   80 (758)
                      ||||+.|+|+||+|+|+|+++|++||+||++||++..+++.|+|+||++++++|||+++||+++++|||||||||+|||+
T Consensus         1 mt~~~~~~~~~~~l~v~g~~~l~~vp~nv~~t~~~~~~~~~g~F~G~~~~~~~srhv~~~G~l~~~rf~~~fRfK~WWmt   80 (775)
T PLN02219          1 MTVTPKISINNGNLVVQGKTILTGVPDNIVLTPGSGNGFVAGAFIGATASHSKSLHVFPVGVLEGLRFMCCFRFKLWWMT   80 (775)
T ss_pred             CcccceeEEcCCeEEECCEEeeccCCCceEecCCCCCCCCcceEEeeecCCcccceeeecccccCcEEeeeeehhhhccc
Confidence            99999999999999999999999999999999998877889999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCcccEEEEEEecCCCCccCCCccccCCceEEEEEEEeecCceEEEEecCCCCeEEEEEEcCCCccccccc
Q 004371           81 QRMGNCGQDVPFETQFLVVEAREGSHFDEGSQYGEEQSALYTVFLPILEGDFRAVLQGNEQNELEICLESGDPDVDEFEG  160 (758)
Q Consensus        81 pr~g~~~~~i~~etq~~l~e~~~~~~~~~~~~~~~~~~~~y~v~Lpl~~g~~ra~L~~~~~~~l~i~~esg~~~v~~~~~  160 (758)
                      ||+|++++|||.||||+|+|.++.....    ..+++++.|+||||+++|+|||+||++++++|+||+|||++.|+++++
T Consensus        81 ~~~G~~g~dip~eTQ~~l~e~~~~~~~~----~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~  156 (775)
T PLN02219         81 QRMGSCGKDIPLETQFMLLESKDEVEGG----NGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQG  156 (775)
T ss_pred             hhhccCCCcCCcceEEEEEEcCCCcccc----ccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCcccccccc
Confidence            9999999999999999999998632100    011234469999999999999999999999999999999999999999


Q ss_pred             ceEEEEEecCChHHHHHHHHHHHHHhhccCCCcccccCCccccccccccccccccccCHHHHHHHHHHHHhCCCCCcEEE
Q 004371          161 SHLVFVAAGSDPFDVITNAVKTVERHLLTFSHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFII  240 (758)
Q Consensus       161 ~~~v~v~~g~dp~~~i~~A~~~v~~~~~tf~~~~~k~~P~~~d~~GWCTWdafy~~vte~~I~~~l~~L~~~Gi~~~~vI  240 (758)
                      ..+|||++|+|||++|++|++++++|++||++|++|++|+++|+||||||||||++|||++|++++++|+++|+|++|||
T Consensus       157 ~~~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~vi  236 (775)
T PLN02219        157 LHLVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLI  236 (775)
T ss_pred             ceEEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCCCCCCCcccccccchhccccccCcccCccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEEEeecccc
Q 004371          241 IDDGWQSVGMDPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGY  320 (758)
Q Consensus       241 IDDGWQ~~~~d~~~~~~~~~~~~~~~~rL~~~~~n~KFp~~~~~~~~~~~~~~Glk~lv~~Ik~~~Glk~VgvWhal~Gy  320 (758)
                      ||||||++.+++++.++...+|.||++||++|++|+||++.+.    ..++|.|||++|++||+++|||||||||||+||
T Consensus       237 IDDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~----~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GY  312 (775)
T PLN02219        237 IDDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQ----KNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGY  312 (775)
T ss_pred             EccCccccccccccccccccccchhhhhhcccccccccccccc----ccCCCCcHHHHHHHHHhccCCcEEEEeeeccce
Confidence            9999999998876667888999999999999999999997221    246889999999999999999999999999999


Q ss_pred             cCCcCCCCcccccccccccccCCCCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEccccchh
Q 004371          321 WGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILE  400 (758)
Q Consensus       321 WgGI~P~~~~~~~y~~~~~~~~~spg~~~~~pd~~~d~~~~~G~glv~p~~a~~fy~~~~~~Las~GVD~VKvD~q~~l~  400 (758)
                      ||||+|++++|++|+++++||..+||+.+++||+++|++..+|+++++|+++++||++||+||+++||||||||+|+.++
T Consensus       313 WGGv~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le  392 (775)
T PLN02219        313 WGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIE  392 (775)
T ss_pred             ecCcCCCCcccccccccccccccCCCccccCcchhhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hccCCCCChhhHHHHHHHHHHHHHHhhCCCCcEEeeccCCCCCcccccccCeEeccCCcCCCCCcchhHHHHHHHhhhhh
Q 004371          401 TLGAGHGGRVKLSRKYHQALEASIARNFRNNDIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIF  480 (758)
Q Consensus       401 ~l~~~~~gr~~l~~ay~~AL~~s~~~~f~~~~iI~CMs~~~~~l~~~~~~~~~R~SdDf~P~~p~~~~~Hi~~~a~nsl~  480 (758)
                      +++.++++|++++++||+||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++|||||||
T Consensus       393 ~L~~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLl  472 (775)
T PLN02219        393 TLGAGHGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLF  472 (775)
T ss_pred             HhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCccCCCCChhhHHHHHHHHhcCCcEEeeCCCCCCcHHhhhhhcCCCCceeecCCCCCcCccccccCCCCCCc
Q 004371          481 LGEFMQPDWDMFHSLHPMAEYHGAARAVGGCAIYVSDKPGQHDFNLLRKLVLPDGSILRAKLPGRPTRDCLFSDPARDGK  560 (758)
Q Consensus       481 ~g~~~~PDwDMf~s~h~~a~~HaaaraisGgPvyiSD~pg~hd~~lL~~lv~pdG~ilR~~~pg~pt~d~lf~dp~~d~~  560 (758)
                      ||+++|||||||||.||+|+|||++||||||||||||+||+||++||||||+|||+||||++||||||||||.||++|++
T Consensus       473 lg~~v~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~  552 (775)
T PLN02219        473 LGEFMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGT  552 (775)
T ss_pred             hccccccCchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEEeecCccceEEEEeecCCceeeccccccccCCCCCceEeeeeccCCCCcccccCCCCCCcEEEEEecCceEEecC
Q 004371          561 SLLKIWNLNDFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGEVAYLP  640 (758)
Q Consensus       561 ~lLki~n~~~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~~~~l~  640 (758)
                      ++|||||+|+++||||+|||||++||++++++++|+.+|.++|+.|+++||++|.++|+.+|+++|+||+|++|++++++
T Consensus       553 slLKIwn~n~~~gviG~FNcqGagW~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~  632 (775)
T PLN02219        553 SLLKIWNVNKCTGVVGVFNCQGAGWCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLP  632 (775)
T ss_pred             eEEEEEEcccccceEEEEeccCCCCCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeeEEecCCcEEEEEEeeeeecCCCceEEEeehhhhhcCccceeEEEEee---c----------------------C
Q 004371          641 KNATLPITLKSREYEVYTVVPVKELSSGTRFAPIGLVKMFNSGGAIKELRYES---E----------------------G  695 (758)
Q Consensus       641 ~~~~~~v~L~~~~~ei~t~~Pv~~~~~~~~~A~iGL~~~~~~~gAV~~~~~~~---~----------------------~  695 (758)
                      +++.++|+|++++|||||++||+.+..+++||||||+||||+||||+++++..   +                      .
T Consensus       633 ~~~~~~vtL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  712 (775)
T PLN02219        633 KGASIPVTLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSP  712 (775)
T ss_pred             CCCceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCC
Confidence            99999999999999999999999999899999999999999999999999851   0                      1


Q ss_pred             ceEEEEEEeecceeeEEecCCCceEEeCCeEeeeEEecCceEEEEEeecccccceeeeEEEEC
Q 004371          696 TATVDMKVRGCGEFGAYSSARPRRIAVDSEEVQFGYEEESGLVTLTLRVPKEELYLWNISFEL  758 (758)
Q Consensus       696 ~~~v~v~~kg~G~~g~Y~s~~P~~~~vdg~~~~f~y~~~~gll~~~l~~~~~~~~~~~v~~~~  758 (758)
                      +..|+|+|||||+||+|||++|++|.|||++++|+|++++|+|+|+||||++++++|.|||++
T Consensus       713 ~~~v~~~v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~~~~~~~~~~~v~~~~  775 (775)
T PLN02219        713 TATIALSVRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEIQV  775 (775)
T ss_pred             CceEEEEEEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEccCCcccCceeeEEEeC
Confidence            346999999999999999999999999999999999999999999999999999999999985

>PLN02355 probable galactinol--sucrose galactosyltransferase 1	Back alignment and domain information

>PLN02684 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PLN02711 Probable galactinol--sucrose galactosyltransferase	Back alignment and domain information

>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins	Back alignment and domain information

>PLN02229 alpha-galactosidase	Back alignment and domain information

>PLN02692 alpha-galactosidase	Back alignment and domain information

>PLN02808 alpha-galactosidase	Back alignment and domain information

>PLN03231 putative alpha-galactosidase; Provisional	Back alignment and domain information

>PLN02899 alpha-galactosidase	Back alignment and domain information

>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3	Back alignment and domain information

>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase	Back alignment and domain information

>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose	Back alignment and domain information

>PRK10658 putative alpha-glucosidase; Provisional	Back alignment and domain information

>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY	Back alignment and domain information

>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus	Back alignment and domain information

>PRK10426 alpha-glucosidase; Provisional	Back alignment and domain information

>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate	Back alignment and domain information

>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37	Back alignment and domain information

>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride	Back alignment and domain information

>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ	Back alignment and domain information

>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase	Back alignment and domain information

>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities	Back alignment and domain information

>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase	Back alignment and domain information

>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II	Back alignment and domain information

>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end	Back alignment and domain information

>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds	Back alignment and domain information

>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3	Back alignment and domain information

>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB)	Back alignment and domain information

>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase	Back alignment and domain information

>PF13200 DUF4015: Putative glycosyl hydrolase domain	Back alignment and domain information

>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		758
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	4e-09
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	1e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-07
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	3e-07
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	3e-07
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	7e-07
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	9e-07
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	4e-05
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	8e-05
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	1e-04

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A* Length = 720	Back alignment and structure

 Score = 58.9 bits (142), Expect = 4e-09
 Identities = 53/365 (14%), Positives = 108/365 (29%), Gaps = 62/365 (16%)

Query: 131 DFRAVLQGNEQNELEICLESGDPDVDEFEGSHLVFVAAGSDPFDVITNAVKTVERHLLTF 190
           +   +L G  +      L SG+     F    ++   +      +       +  H+   
Sbjct: 267 NQTRLLLGLNEELFSYPLASGE----TFTVPEVILSYSAEGLSALSQQYHNCIRNHVCRS 322

Query: 191 SHRERKKMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPPKFIIIDDGWQSVGM 250
            +   ++           +W+A Y D TG+ +    +     GI    +++DDGW     
Sbjct: 323 KYVHMQRPV------LINSWEAAYFDFTGDTIVDLAKEAASLGI--DMVVMDDGW----- 369

Query: 251 DPSGFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKY 310
               F  R D+ ++  +   +     K                 L  ++T +  +  +K+
Sbjct: 370 ----FGKRNDDNSSLGDWQVN---ETKLGG-------------SLAELITRVH-EQGMKF 408

Query: 311 VYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPE 370
                   G W          + Y +   + +   G +     +         L     E
Sbjct: 409 --------GIWIEPEMINEDSDLYRAHPDWAIRIQGKKPVRSRNQL------LLDFSRKE 454

Query: 371 KVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIAR---N 427
                +D++   L    ID VK D+   +  + AG+     LS  Y   +   + R    
Sbjct: 455 VRDCVFDQICVVLDQGKIDYVKWDMNRSMADVYAGN-----LSYDYVLGVYDFMERLCSR 509

Query: 428 FRNNDIICCMSHNTDGLYS-AKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQ 486
           + +  +  C              S  I  SD+    +         S  Y    +G  + 
Sbjct: 510 YPDLLLEGCSGGGGRFDAGMLYYSPQIWCSDNTDAINRTRIQYG-TSFFYPVSAMGAHVS 568

Query: 487 PDWDM 491
              + 
Sbjct: 569 AVPNH 573

PyMOL of 2yfo

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13 Length = 564	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A* Length = 417	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A* Length = 732	Back alignment and structure

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125} Length = 433	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis} Length = 745	Back alignment and structure

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1 Length = 362	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea} Length = 397	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A* Length = 614	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		758
3cc1_A		433	BH1870 protein, putative alpha-N-acetylgalactosami	100.0
1uas_A		362	Alpha-galactosidase; TIM-barrel, beta-alpha-barrel	100.0
1zy9_A		564	Alpha-galactosidase; TM1192, struc genomics, joint	100.0
3hg3_A		404	Alpha-galactosidase A; glycoprotein, carbohydrate-	100.0
1szn_A		417	Alpha-galactosidase; (beta/alpha)8 barrel,TWO doma	100.0
3a5v_A		397	Alpha-galactosidase; beta/alpha barrel, N-glycosyl	100.0
3lrk_A		479	Alpha-galactosidase 1; tetramer, GH27, glycoprotei	100.0
4do4_A		400	Alpha-N-acetylgalactosaminidase; pharmacological c	100.0
3a21_A		614	Putative secreted alpha-galactosidase; beta-alpha-	100.0
4fnq_A		729	Alpha-galactosidase AGAB; glycoside hydrolase, hyd	99.96
2xn2_A		732	Alpha-galactosidase; hydrolase, glycosidase; HET:	99.93
2yfo_A		720	Alpha-galactosidase-sucrose kinase agask; hydrolas	99.92
3mi6_A		745	Alpha-galactosidase; NESG, structural genomics, PS	99.91
2f2h_A		773	Putative family 31 glucosidase YICI; BETA8alpha8 b	99.4
4ba0_A		817	Alpha-glucosidase, putative, ADG31B; hydrolase; HE	99.13
2g3m_A		693	Maltase, alpha-glucosidase; hydrolase, glycoside h	99.09
2xvl_A		1020	Alpha-xylosidase, putative, XYL31A; hydrolase, gly	98.94
3nsx_A		666	Alpha-glucosidase; structural genomics, PSI-2, pro	98.87
3lpp_A		898	Sucrase-isomaltase; glycoside hydrolase family 31,	98.86
3l4y_A		875	Maltase-glucoamylase, intestinal; glycoside hydrol	98.82
3a24_A		641	Alpha-galactosidase; glycoside hydrolase family 97	98.67
3top_A		908	Maltase-glucoamylase, intestinal; membrane, hydrol	97.92
2d73_A		738	Alpha-glucosidase SUSB; glycoside hydrolase family	97.74
2x2h_A		1027	Alpha-1,4-glucan lyase isozyme 1; anhydrofructose	96.84
3k1d_A		722	1,4-alpha-glucan-branching enzyme; mycobacterium t	90.07
3zss_A		695	Putative glucanohydrolase PEP1A; alpha-glucan bios	88.05
1m7x_A		617	1,4-alpha-glucan branching enzyme; alpha/beta barr	84.24
1ea9_C		583	Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A	81.51
3dhu_A		449	Alpha-amylase; structural genomics, hydrolase, gly	80.42

>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}	Back alignment and structure

Probab=100.00  E-value=8.2e-43  Score=390.97  Aligned_cols=379  Identities=17%  Similarity=0.214  Sum_probs=253.4

Q ss_pred             cccccccccccccccCHHHHHHHHHHH----HhCCCCCcEEEEecCcccCCCCCCCcccccccchhccccccCcccC-cc
Q 004371          203 NWFGWCTWDAFYTDVTGEGVKQGLESF----EKGGIPPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HK  277 (758)
Q Consensus       203 d~~GWCTWdafy~~vte~~I~~~l~~L----~~~Gi~~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~rL~~~~~n-~K  277 (758)
                      .+||||||++||+++||++|++.++.|    ++.|+.  +|+||||||..+++..+...   ....-...+++|.++ +|
T Consensus        12 pp~gwnsW~~~~~~i~e~~i~~~ad~~~~gl~~~G~~--~~~iDDgW~~~~~~~~~y~~---~~~~~~d~~G~~~~~~~k   86 (433)
T 3cc1_A           12 PPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWE--YIVVDIQWYEPTANSSAYNP---FAPLCMDEYGRLLPATNR   86 (433)
T ss_dssp             CCEEEESHHHHTTCCCHHHHHHHHHHHHHHTGGGTCC--EEEECSCTTCCCTTSTTCCT---TSCSCBCTTSCBCCCTTT
T ss_pred             CCEEEEChhhhCCcCCHHHHHHHHHHHHhcchhhCCe--EEEECCCcCCCCCccccccc---ccccccCCCCCEeECCcc
Confidence            358999999999999999999999999    555555  99999999987543210000   000001136677765 69


Q ss_pred             ccC-CCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEEEeecccccCCcCCCCccccc-cccc-ccccCCCCCCCCCCCCc
Q 004371          278 FQK-NGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEH-YESK-MQYPVSSPGVQSNEPCD  354 (758)
Q Consensus       278 Fp~-~~~~~~~~~~~~~Glk~lv~~Ik~~~Glk~VgvWhal~GyWgGI~P~~~~~~~-y~~~-~~~~~~spg~~~~~pd~  354 (758)
                      ||+ .++         .|||+++++||+ .||| +|||+.+.-.+..+.|++++... |..+ +..+....         
T Consensus        87 FP~~~~~---------~Gl~~l~~~ih~-~Glk-~Giw~~p~i~~~~v~~~s~~~~~~~~~~di~~~~~~~---------  146 (433)
T 3cc1_A           87 FPSAKNG---------AGFKPLSDAIHD-LGLK-FGIHIMRGIPRQAVYENSPVLGSTKTAREIAHTNSIC---------  146 (433)
T ss_dssp             CGGGTTT---------TTTHHHHHHHHH-TTCE-EEEEEESSEEHHHHHHTCBCTTSSCBHHHHEETTCCB---------
T ss_pred             CCCcccC---------CCHHHHHHHHHH-cCCe-eEEEeCCCCchhccCCCCccccccceecccccCCccc---------
Confidence            996 222         399999999999 6999 89998873212234565543211 1100 00000000         


Q ss_pred             cccccccCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccCCCCChhhHHHHHHHHHHHHHHhhCCCCcEE
Q 004371          355 AFDSIAKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLSRKYHQALEASIARNFRNNDII  434 (758)
Q Consensus       355 ~~d~~~~~G~glv~p~~a~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~~~~gr~~l~~ay~~AL~~s~~~~f~~~~iI  434 (758)
                      .+.. ...++++.+|+ ++.||+.++++|++|||||||+|+|+.. .+. ++  ..+..++|++||++      .+++|+
T Consensus       147 ~~~~-~~~~lD~~~p~-~~~~~~~~~~~l~~~GvDyvK~D~~~~~-~~~-~~--~~~~~~~~~~aL~~------~gr~i~  214 (433)
T 3cc1_A          147 PWNT-DMYGVDPTKEG-AQSYYNSLFELYAQWGVDFVKVDDIAAS-RLY-DT--HLEEIKMIQRAIQA------CGRPMV  214 (433)
T ss_dssp             TTBT-TEEEECTTSTT-HHHHHHHHHHHHHHTTCCEEEEESCSCT-TSS-CC--CHHHHHHHHHHHHH------SSSCCE
T ss_pred             CCCC-CceeecCCCHH-HHHHHHHHHHHHHHcCCCEEEeCCcccc-cCC-cc--cHHHHHHHHHHHHh------cCCCEE
Confidence            0100 01234455554 9999999999999999999999999852 221 11  34566778888765      478999


Q ss_pred             eeccCCCCC----cccccccCeEeccCCcCCCCCcchhHHHH-HHHhhhhhccCCCCCCCccCCCCC-------------
Q 004371          435 CCMSHNTDG----LYSAKRSAVIRASDDFWPRDPASHTIHIA-SVAYNTIFLGEFMQPDWDMFHSLH-------------  496 (758)
Q Consensus       435 ~CMs~~~~~----l~~~~~~~~~R~SdDf~P~~p~~~~~Hi~-~~a~nsl~~g~~~~PDwDMf~s~h-------------  496 (758)
                      .|+|+++..    .+..+.+++||+|+|++|.|+...  |++ .+++.+.++++++|||+|||+++|             
T Consensus       215 ~slc~g~~~~~~~~~~~~~~n~wR~s~D~~~~w~~~~--~~~~~~~~~~~~~~~g~~nD~Dml~vg~~g~~~~~~~~~~~  292 (433)
T 3cc1_A          215 LSLSPGPAPIKYAHHFKTNANMWRITDDFWDDWSLLY--QMFERCEVWEKHIGTGHWPDCGMLPLGHIGIRSVDGPGGDR  292 (433)
T ss_dssp             EECCCSBSSEESCSSSCCTTGGGCCEECCCSCHHHHH--HHHHHHHHHHHSCCCSCCCBCCCBCCSEECTTCSSSSSSSE
T ss_pred             EEecCCCCChhhhhhhhhhCcEEEeccCccccHHHHH--HHHHHHHHHHhhcCCCccCChHHhcccCccccccccccccc
Confidence            999986322    245678999999999999998754  444 355677788889999999999985             


Q ss_pred             ------hhhHHHHHHHHhcCCcEEeeCCCCCCcH---Hhhh--hh--cCCCCceeecCCCCCcCccccccCCCCCCcceE
Q 004371          497 ------PMAEYHGAARAVGGCAIYVSDKPGQHDF---NLLR--KL--VLPDGSILRAKLPGRPTRDCLFSDPARDGKSLL  563 (758)
Q Consensus       497 ------~~a~~HaaaraisGgPvyiSD~pg~hd~---~lL~--~l--v~pdG~ilR~~~pg~pt~d~lf~dp~~d~~~lL  563 (758)
                            .+.++|+++|||+++||++||.+.+.+-   +||+  .+  +-+||..-|+      .    +.    ++  -+
T Consensus       293 ~~~lt~~E~rt~~alwai~~spL~ig~dl~~~~~~~~~lL~N~eviavnqdg~~~~~------v----~~----~~--~~  356 (433)
T 3cc1_A          293 WTRFTKDEQLTMMNLWAICHSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNRF------V----YR----EE--DK  356 (433)
T ss_dssp             ECSSCHHHHHHHHHHHHHTTCCEEECSCGGGCCHHHHHHHCCHHHHHHHHHCEEEEE------E----EE----ET--TE
T ss_pred             cCCCCHHHHHHHHHHHHHhcCceEecCccccCCHHHHHHhcChhheeecCCCcCcee------e----Ee----cC--Cc
Confidence                  4568899999999999999999887664   4552  22  1256654442      1    11    12  25


Q ss_pred             EEEeec--CccceEEEEeecCCceeeccccccccCCCCCceEeeeeccCCCCcccccCCCCCCcEEEEEecCce-EEecC
Q 004371          564 KIWNLN--DFTGVVGVFNCQGAGWCRVGKKNLIHDEQPGTTTGFIRAKDVDYLPRVAGDEWTGDAIAYSHLGGE-VAYLP  640 (758)
Q Consensus       564 ki~n~~--~~~gvlg~FN~~g~~w~~~~~~~~~~~~~~~~~s~~v~~~D~~~~~~~a~~~~~~~~~vy~~~~g~-~~~l~  640 (758)
                      .||...  .+.-+|++||....               +.+++  ++.+|+. +        .+.|-|+.--+++ +....
T Consensus       357 ~vw~~~l~~g~~~val~N~~~~---------------~~~~~--~~~~~lg-l--------~~~~~v~Dlw~~~~~g~~~  410 (433)
T 3cc1_A          357 VAWAANGRNGEAYVALFNLHDQ---------------QKTLQ--FRLDMVG-I--------METVQLFNVWDRSFLQSLA  410 (433)
T ss_dssp             EEEEEECSSSCEEEEEEECSSS---------------CEEEE--ECGGGTT-C--------CSCEEEEETTTTEEEEEEC
T ss_pred             EEEEEECCCCCEEEEEEeCCCC---------------CEEEE--EEHHHcC-C--------CCceEEEECCCCCcccccc
Confidence            677653  44568999997642               12233  4455553 1        2357788877776 43333


Q ss_pred             CCCeeeEEecCCcEEEEEEeee
Q 004371          641 KNATLPITLKSREYEVYTVVPV  662 (758)
Q Consensus       641 ~~~~~~v~L~~~~~ei~t~~Pv  662 (758)
                      .+..++++|++.++.+|.+.|.
T Consensus       411 ~~~~~~~~v~~hg~~l~~l~~~  432 (433)
T 3cc1_A          411 PSESFQIELKPHQSMMLKLSPD  432 (433)
T ss_dssp             TTCCEEEEECTTCEEEEEEEEC
T ss_pred             CCceEEEEECCCcEEEEEEEeC
Confidence            3348999999999999999885

PyMOL of 3cc1

>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1	Back alignment and structure

>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13	Back alignment and structure

>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*	Back alignment and structure

>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*	Back alignment and structure

>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}	Back alignment and structure

>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*	Back alignment and structure

>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*	Back alignment and structure

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*	Back alignment and structure

>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*	Back alignment and structure

>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*	Back alignment and structure

>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*	Back alignment and structure

>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}	Back alignment and structure

>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*	Back alignment and structure

>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*	Back alignment and structure

>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*	Back alignment and structure

>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*	Back alignment and structure

>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*	Back alignment and structure

>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*	Back alignment and structure

>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*	Back alignment and structure

>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}	Back alignment and structure

>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*	Back alignment and structure

>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*	Back alignment and structure

>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*	Back alignment and structure

>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}	Back alignment and structure

>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*	Back alignment and structure

>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*	Back alignment and structure

>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1	Back alignment and structure

>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		758
d1szna2		314	c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [T	5e-21
d1zy9a2		348	c.1.8.13 (A:178-525) Alpha-galactosidase GalA cata	4e-16
d1uasa2		273	c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [	2e-07
d1r46a2		292	c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens)	5e-07
d1ktba2		293	c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallu	9e-05
d2f2ha4		338	c.1.8.13 (A:248-585) Putative glucosidase YicI, do	0.002

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]} Length = 314	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

 Score = 92.2 bits (228), Expect = 5e-21
 Identities = 54/342 (15%), Positives = 95/342 (27%), Gaps = 71/342 (20%)

Query: 197 KMPDMLNWFGWCTWDAFYTDVTGEGVKQGLESFEKGGIPP---KFIIIDDGWQSVGMDPS 253
           K+P +    GW +W+A++ D+         E     G+      ++ IDD W        
Sbjct: 10  KVPSL----GWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVD 65

Query: 254 GFEFRADNTANFANRLTHIKENHKFQKNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYV 313
           G                HI  N     +G +G  ++  ALGL               + +
Sbjct: 66  G----------------HIAPNATRFPDGIDGLAKKVHALGL--------------KLGI 95

Query: 314 WHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSIAKNGLGLVNPEKVF 373
           +           P   G E                     DA    A  G+  +  +   
Sbjct: 96  YSTAGTATCAGYPASLGYEDV-------------------DAA-DFADWGVDYLKYD-NC 134

Query: 374 HFYDELHSYLASAGIDGVKVDVQNILETLG------AGHGGRVKLSRKYHQALEASIARN 427
           +   +      +   D VK        T         G+      S +   A+  ++A+ 
Sbjct: 135 NVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQ 194

Query: 428 FRNNDIICCMSHNTDGLYSAKRSA-VIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQ 486
                +  C+    D       +    R SDD  P   +   I +   ++    +  +  
Sbjct: 195 SHEIVLSMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTRI-LNLNSFKLNSVDFWGH 253

Query: 487 PDWDMFH----SLHPMAEY-HGAARAVGGCAIYVSDKPGQHD 523
            D DM      +L       H A  A     + +     Q  
Sbjct: 254 NDADMLEVGNGNLTAAETRTHFALWAAMKSPLLIGTDLAQLS 295

PyMOL of d1szna2

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 348	Back information, alignment and structure

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]} Length = 273	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]} Length = 292	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]} Length = 293	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} Length = 338	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		758
d1szna2		314	Melibiase {Trichoderma reesei [TaxId: 51453]}	100.0
d1uasa2		273	Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	100.0
d1r46a2		292	Melibiase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1zy9a2		348	Alpha-galactosidase GalA catalytic domain {Thermot	100.0
d1ktba2		293	Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	99.98
d2f2ha4		338	Putative glucosidase YicI, domain 2 {Escherichia c	99.27
d1g5aa2		554	Amylosucrase {Neisseria polysaccharea [TaxId: 489]	89.57
d1gcya2		357	G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase	88.53
d1ht6a2		347	Plant alpha-amylase {Barley (Hordeum vulgare), AMY	80.59
d1wzla3		382	Maltogenic amylase, central domain {Thermoactinomy	80.48
d1vema2		417	Bacterial beta-amylase {Bacillus cereus [TaxId: 13	80.23

>d1szna2 c.1.8.1 (A:1-314) Melibiase {Trichoderma reesei [TaxId: 51453]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: Amylase, catalytic domain
domain: Melibiase
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=5.9e-38  Score=331.79  Aligned_cols=268  Identities=17%  Similarity=0.201  Sum_probs=199.3

Q ss_pred             ccccccccccccccCHHHHHHHHHHHHhCCC---CCcEEEEecCcccCCCCCCCcccccccchhccccccCcccC-cccc
Q 004371          204 WFGWCTWDAFYTDVTGEGVKQGLESFEKGGI---PPKFIIIDDGWQSVGMDPSGFEFRADNTANFANRLTHIKEN-HKFQ  279 (758)
Q Consensus       204 ~~GWCTWdafy~~vte~~I~~~l~~L~~~Gi---~~~~vIIDDGWQ~~~~d~~~~~~~~~~~~~~~~rL~~~~~n-~KFp  279 (758)
                      +||||||++||+++||++|++.++.|++.|+   ++++++||||||..+++.                +++|.++ +|||
T Consensus        13 p~GwnSW~~~~~~i~e~~i~~~a~~l~e~gl~~~G~~~~~iDdGW~~~~~~~----------------~G~~~~d~~kFP   76 (314)
T d1szna2          13 SLGWNSWNAYHCDIDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRV----------------DGHIAPNATRFP   76 (314)
T ss_dssp             CEEEESHHHHTTCCCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCB----------------TTBCCBCTTTCT
T ss_pred             CCcccchhhhcccCCHHHHHHHHHHHHHcCccccCcEEEEECCCccCCCCCC----------------CCCeeeCHhhcC
Confidence            4899999999999999999999999998875   367999999999876542                3456654 7999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEEEeecccccCCcCCCCcccccccccccccCCCCCCCCCCCCcccccc
Q 004371          280 KNGKEGQREEDPALGLRHIVTEIKEKHDLKYVYVWHAITGYWGGVRPGVTGMEHYESKMQYPVSSPGVQSNEPCDAFDSI  359 (758)
Q Consensus       280 ~~~~~~~~~~~~~~Glk~lv~~Ik~~~Glk~VgvWhal~GyWgGI~P~~~~~~~y~~~~~~~~~spg~~~~~pd~~~d~~  359 (758)
                      +             |||+++++||+ .|+| +|+|+++.++|..-+|+....+......                    .
T Consensus        77 ~-------------Gl~~~~~~i~~-~G~k-~Giw~~p~~~~~~~~p~~~~~~~~~~~~--------------------~  121 (314)
T d1szna2          77 D-------------GIDGLAKKVHA-LGLK-LGIYSTAGTATCAGYPASLGYEDVDAAD--------------------F  121 (314)
T ss_dssp             T-------------HHHHHHHHHHH-TTCE-EEEEEESSSBCTTSCBCCTTCHHHHHHH--------------------H
T ss_pred             C-------------chHHHHHHHHh-cCCe-EEEeecccccccCCCcccccccccchhh--------------------h
Confidence            5             99999999999 6999 8999999988877777653311111100                    0


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHhcCCCEEEEccccchhhccC------CCCChhhHHHHHHHHHHHHHHhhCCCCcE
Q 004371          360 AKNGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGA------GHGGRVKLSRKYHQALEASIARNFRNNDI  433 (758)
Q Consensus       360 ~~~G~glv~p~~a~~fy~~~~~~Las~GVD~VKvD~q~~l~~l~~------~~~gr~~l~~ay~~AL~~s~~~~f~~~~i  433 (758)
                      ...|+++..| +++.+++.++..++++||||+|+|.+........      +...........+.++.+++++.+++..+
T Consensus       122 ~~~~~d~~~~-d~~~~~~~~~~~~~~~g~d~~K~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i  200 (314)
T d1szna2         122 ADWGVDYLKY-DNCNVPSDWQDEYVACNPDFVKTGPNGTCTTALDPTLAPPGYDWSTSKSAERFGAMRNALAKQSHEIVL  200 (314)
T ss_dssp             HHTTCCEEEE-ECCCCCGGGSCSSBCCCTTTSCCBGGGBCCTTTCTTBCCTTCCGGGSHHHHHHHHHHHHHHTSSSCCEE
T ss_pred             hhcCCccccc-hHHHHHHHHHHHHHHhCCceEEecccccchhccCcccCccccCcchhhHHHHHHHHHHHHHHhCCCeEE
Confidence            0112333332 3456667777778999999999999876432211      11111222334445666778888887778


Q ss_pred             EeeccCCCCCc-ccccccCeEeccCCcCCCCCcchhHHHHHHHhhhhhccCCCCCCCccCCCCC-----hhhHHHHHHHH
Q 004371          434 ICCMSHNTDGL-YSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLH-----PMAEYHGAARA  507 (758)
Q Consensus       434 I~CMs~~~~~l-~~~~~~~~~R~SdDf~P~~p~~~~~Hi~~~a~nsl~~g~~~~PDwDMf~s~h-----~~a~~Haaara  507 (758)
                      ..||++..... +....++++|+|+|++|.|...+. ++..++++..+.+...|||+||++.++     .+.++|+++||
T Consensus       201 ~~c~~~~~~~~~~~~~~~~~~R~s~D~~~~w~~~~~-~~~~~~~~~~~~~~~~~~DpDml~~g~~~lt~~e~r~~~sl~a  279 (314)
T d1szna2         201 SMCIWGQADVFSWGNSTGISWRMSDDISPNWGSVTR-ILNLNSFKLNSVDFWGHNDADMLEVGNGNLTAAETRTHFALWA  279 (314)
T ss_dssp             EECCTTGGGHHHHGGGTCSEEECSSCCCSSHHHHHH-HHHHHHTCGGGCBTTBEEECCSCCTTCTTCCHHHHHHHHHHHH
T ss_pred             EecCCCCCCchhhhhhcccceeecCCcccccchHHH-HHHHHHHHHHHhcCCccCCchhcccCCCCCCHHHHHHHHHHHH
Confidence            88888765432 455778999999999999887654 677888999888999999999998865     35689999999


Q ss_pred             hcCCcEEeeCCCCCCcH
Q 004371          508 VGGCAIYVSDKPGQHDF  524 (758)
Q Consensus       508 isGgPvyiSD~pg~hd~  524 (758)
                      ++|+|++|||.+.+.+-
T Consensus       280 ~~~~pl~~g~dl~~~~~  296 (314)
T d1szna2         280 AMKSPLLIGTDLAQLSQ  296 (314)
T ss_dssp             HTTCCEEECSCGGGCCH
T ss_pred             HHhCchhccCCcccCCH
Confidence            99999999998766553

PyMOL of d1szna2

>d1uasa2 c.1.8.1 (A:1-273) Melibiase {Rice (Oryza sativa) [TaxId: 4530]}	Back information, alignment and structure

>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ktba2 c.1.8.1 (A:1-293) Melibiase {Chicken (Gallus gallus) [TaxId: 9031]}	Back information, alignment and structure

>d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]}	Back information, alignment and structure

>d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]}	Back information, alignment and structure

>d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]}	Back information, alignment and structure

>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}	Back information, alignment and structure

>d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure