Query 004378
Match_columns 758
No_of_seqs 366 out of 1994
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 23:20:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004378.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004378hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sdma_ c.37.1.9 (A:) Kinesin 100.0 3.5E-80 2.6E-84 673.0 23.6 340 24-377 1-350 (364)
2 d1goja_ c.37.1.9 (A:) Kinesin 100.0 4.5E-80 3.3E-84 669.2 19.5 329 20-358 2-341 (354)
3 d1v8ka_ c.37.1.9 (A:) Kinesin 100.0 2E-77 1.4E-81 651.0 21.4 316 20-347 27-362 (362)
4 d1x88a1 c.37.1.9 (A:18-362) Ki 100.0 1.3E-76 9.1E-81 639.8 18.8 322 24-349 1-345 (345)
5 d1bg2a_ c.37.1.9 (A:) Kinesin 100.0 7.2E-76 5.2E-80 628.6 22.4 310 22-346 4-323 (323)
6 d2zfia1 c.37.1.9 (A:4-352) Kin 100.0 1.3E-75 9.6E-80 633.0 24.6 318 24-344 2-349 (349)
7 d1ry6a_ c.37.1.9 (A:) Kinesin 100.0 1.4E-74 1E-78 620.6 21.8 311 25-345 2-330 (330)
8 d1f9va_ c.37.1.9 (A:) Kinesin 100.0 9.7E-74 7E-78 616.8 18.1 319 23-348 1-341 (342)
9 d2ncda_ c.37.1.9 (A:) Kinesin 100.0 2E-72 1.5E-76 612.6 28.2 312 22-345 44-367 (368)
10 d1r7ra3 c.37.1.20 (A:471-735) 93.4 0.026 1.9E-06 56.0 4.4 51 70-120 3-58 (265)
11 d1l8qa2 c.37.1.20 (A:77-289) C 93.3 0.022 1.6E-06 54.7 3.7 50 70-122 6-55 (213)
12 d1w5sa2 c.37.1.20 (A:7-293) CD 90.3 0.068 4.9E-06 51.0 3.2 36 86-121 24-64 (287)
13 d1lv7a_ c.37.1.20 (A:) AAA dom 87.3 0.13 9.4E-06 50.7 2.9 46 70-120 8-62 (256)
14 d1gvnb_ c.37.1.21 (B:) Plasmid 86.7 0.17 1.2E-05 48.2 3.3 30 91-120 15-49 (273)
15 d1d2na_ c.37.1.20 (A:) Hexamer 84.8 0.23 1.7E-05 48.4 3.2 50 70-120 5-57 (246)
16 d1ixza_ c.37.1.20 (A:) AAA dom 83.4 0.25 1.8E-05 48.2 2.9 49 71-120 6-59 (247)
17 d1e32a2 c.37.1.20 (A:201-458) 83.4 0.25 1.8E-05 48.3 2.8 49 72-120 2-55 (258)
18 d1p9ra_ c.37.1.11 (A:) Extrace 83.1 0.23 1.7E-05 51.8 2.6 31 92-122 147-177 (401)
19 d1fnna2 c.37.1.20 (A:1-276) CD 80.8 0.57 4.1E-05 43.9 4.3 37 93-137 30-69 (276)
20 d1sxjd2 c.37.1.20 (D:26-262) R 80.3 0.4 2.9E-05 44.8 2.9 43 72-122 10-52 (237)
21 d1iqpa2 c.37.1.20 (A:2-232) Re 76.7 0.54 3.9E-05 44.0 2.6 41 72-120 22-62 (231)
22 d1qdea_ c.37.1.19 (A:) Initiat 73.5 0.67 4.9E-05 43.8 2.3 25 94-120 40-64 (212)
23 d1sxja2 c.37.1.20 (A:295-547) 73.4 0.71 5.1E-05 43.5 2.5 20 101-120 50-69 (253)
24 d1okkd2 c.37.1.10 (D:97-303) G 73.3 0.48 3.5E-05 45.2 1.2 21 101-121 4-24 (207)
25 d1gkub1 c.37.1.16 (B:1-250) He 72.7 0.54 3.9E-05 44.6 1.4 26 93-120 50-75 (237)
26 d1oywa2 c.37.1.19 (A:1-206) Re 71.2 0.4 2.9E-05 44.3 0.1 23 96-120 35-57 (206)
27 d1s2ma1 c.37.1.19 (A:46-251) P 70.2 0.88 6.4E-05 42.3 2.3 25 94-120 31-55 (206)
28 d1szpa2 c.37.1.11 (A:145-395) 69.9 0.93 6.8E-05 41.6 2.4 30 91-120 19-51 (251)
29 d1t6na_ c.37.1.19 (A:) Spliceo 69.5 0.93 6.8E-05 42.4 2.3 25 94-120 31-55 (207)
30 d2p6ra3 c.37.1.19 (A:1-202) He 69.5 0.52 3.8E-05 43.5 0.5 23 95-119 34-56 (202)
31 d1yksa1 c.37.1.14 (A:185-324) 69.3 0.8 5.8E-05 38.4 1.6 15 106-120 10-24 (140)
32 d1veca_ c.37.1.19 (A:) DEAD bo 68.9 1.1 7.8E-05 42.0 2.6 25 94-120 33-57 (206)
33 d1in4a2 c.37.1.20 (A:17-254) H 68.6 1.3 9.8E-05 41.3 3.3 44 72-120 7-52 (238)
34 d1ly1a_ c.37.1.1 (A:) Polynucl 68.0 0.72 5.3E-05 39.8 1.1 16 105-120 4-19 (152)
35 d1sxjc2 c.37.1.20 (C:12-238) R 67.5 1.2 8.8E-05 41.3 2.7 41 72-120 12-52 (227)
36 d1sxjb2 c.37.1.20 (B:7-230) Re 66.9 1.2 9.1E-05 41.3 2.6 29 94-122 27-55 (224)
37 d1q0ua_ c.37.1.19 (A:) Probabl 66.5 0.75 5.4E-05 42.6 0.9 25 94-120 31-55 (209)
38 d1ixsb2 c.37.1.20 (B:4-242) Ho 66.0 1.6 0.00012 40.8 3.3 44 72-120 7-52 (239)
39 d1j8yf2 c.37.1.10 (F:87-297) G 65.8 0.97 7.1E-05 43.1 1.6 18 104-121 13-30 (211)
40 d2eyqa3 c.37.1.19 (A:546-778) 64.8 1.7 0.00012 42.0 3.2 40 77-120 54-93 (233)
41 d2i3ba1 c.37.1.11 (A:1-189) Ca 64.7 0.81 5.9E-05 39.9 0.7 16 105-120 3-18 (189)
42 d2fnaa2 c.37.1.20 (A:1-283) Ar 63.7 1.3 9.6E-05 41.2 2.1 37 82-120 10-46 (283)
43 d2j0sa1 c.37.1.19 (A:22-243) P 63.0 1.5 0.00011 41.8 2.3 25 94-120 47-71 (222)
44 d1gm5a3 c.37.1.19 (A:286-549) 62.7 1.4 9.9E-05 43.5 2.0 39 78-120 83-121 (264)
45 d2qy9a2 c.37.1.10 (A:285-495) 62.6 0.99 7.2E-05 43.1 0.9 17 104-120 10-26 (211)
46 d1g6oa_ c.37.1.11 (A:) Hexamer 62.4 1.5 0.00011 44.3 2.3 26 94-121 158-184 (323)
47 d1wrba1 c.37.1.19 (A:164-401) 61.9 1.6 0.00011 41.8 2.3 25 94-120 51-75 (238)
48 d1vmaa2 c.37.1.10 (A:82-294) G 60.8 1.1 8E-05 42.8 0.9 17 105-121 13-29 (213)
49 d1ofha_ c.37.1.20 (A:) HslU {H 60.3 1.1 8E-05 44.6 0.8 17 104-120 50-66 (309)
50 d2fz4a1 c.37.1.19 (A:24-229) D 59.9 1.7 0.00013 40.3 2.2 26 94-121 78-103 (206)
51 d1uaaa1 c.37.1.19 (A:2-307) DE 58.7 1.5 0.00011 42.1 1.4 19 103-121 14-32 (306)
52 d1pjra1 c.37.1.19 (A:1-318) DE 58.7 1.4 0.0001 42.8 1.3 18 103-120 24-41 (318)
53 d2g9na1 c.37.1.19 (A:21-238) I 58.4 2 0.00014 40.6 2.3 24 95-120 43-66 (218)
54 d1ls1a2 c.37.1.10 (A:89-295) G 57.8 1.3 9.8E-05 41.9 0.9 16 105-120 12-27 (207)
55 d1sxje2 c.37.1.20 (E:4-255) Re 57.4 1.9 0.00013 40.3 1.9 17 105-121 35-51 (252)
56 d1e9ra_ c.37.1.11 (A:) Bacteri 56.8 0.78 5.7E-05 46.9 -1.1 19 106-124 53-71 (433)
57 d1pzna2 c.37.1.11 (A:96-349) D 56.2 2.5 0.00018 39.0 2.6 31 90-120 20-53 (254)
58 d1g41a_ c.37.1.20 (A:) HslU {H 53.1 2.3 0.00017 44.8 1.9 16 105-120 51-66 (443)
59 d1wp9a1 c.37.1.19 (A:1-200) pu 52.5 2.9 0.00021 37.6 2.3 18 101-120 23-40 (200)
60 d1x6va3 c.37.1.4 (A:34-228) Ad 51.4 1.3 9.5E-05 39.4 -0.4 20 100-119 15-35 (195)
61 d2bdta1 c.37.1.25 (A:1-176) Hy 49.8 2.2 0.00016 36.6 1.0 16 105-120 4-19 (176)
62 d1m8pa3 c.37.1.15 (A:391-573) 49.4 2.5 0.00019 36.4 1.3 16 104-119 7-22 (183)
63 d1d0xa2 c.37.1.9 (A:2-33,A:80- 49.3 3.9 0.00028 45.5 3.1 35 85-120 107-142 (712)
64 d1tf7a2 c.37.1.11 (A:256-497) 48.4 3.9 0.00028 37.7 2.6 30 91-120 11-43 (242)
65 d1qhxa_ c.37.1.3 (A:) Chloramp 48.4 2.3 0.00017 36.7 0.9 16 105-120 5-20 (178)
66 d1kk8a2 c.37.1.9 (A:1-28,A:77- 47.6 3.9 0.00029 46.0 2.8 36 84-120 102-138 (789)
67 d2mysa2 c.37.1.9 (A:4-33,A:80- 46.7 4.3 0.00032 45.7 3.0 36 84-120 104-140 (794)
68 d2i1qa2 c.37.1.11 (A:65-322) D 46.7 4 0.00029 36.9 2.3 31 91-121 19-52 (258)
69 d1w7ja2 c.37.1.9 (A:63-792) My 45.4 4.8 0.00035 44.8 3.1 35 85-120 76-111 (730)
70 d1a1va1 c.37.1.14 (A:190-325) 44.8 4.1 0.0003 34.5 1.9 19 100-119 6-24 (136)
71 d1n0wa_ c.37.1.11 (A:) DNA rep 44.4 5.2 0.00038 34.8 2.6 29 92-120 9-40 (242)
72 d1br2a2 c.37.1.9 (A:80-789) My 43.7 5.3 0.00039 44.3 3.1 35 85-120 73-108 (710)
73 d1ukza_ c.37.1.1 (A:) Uridylat 43.7 4.7 0.00034 36.3 2.2 30 104-133 9-44 (196)
74 d1kaga_ c.37.1.2 (A:) Shikimat 43.5 3.2 0.00023 35.0 0.9 15 106-120 5-19 (169)
75 d1njfa_ c.37.1.20 (A:) delta p 43.5 4.8 0.00035 37.8 2.3 18 103-120 34-51 (239)
76 d1nlwa_ a.38.1.1 (A:) Mad prot 43.4 56 0.0041 25.2 8.7 64 363-427 14-77 (79)
77 d1y63a_ c.37.1.1 (A:) Probable 42.9 3.3 0.00024 35.9 1.0 16 104-119 6-21 (174)
78 d1lkxa_ c.37.1.9 (A:) Myosin S 42.6 5.7 0.00041 43.8 3.1 35 85-120 68-103 (684)
79 d1g8pa_ c.37.1.20 (A:) ATPase 41.5 4.1 0.0003 40.2 1.5 42 70-120 3-45 (333)
80 d1knqa_ c.37.1.17 (A:) Glucona 41.1 3.7 0.00027 35.5 1.0 16 105-120 8-23 (171)
81 d1rkba_ c.37.1.1 (A:) Adenylat 40.8 3.6 0.00026 35.4 0.9 15 106-120 7-21 (173)
82 d3adka_ c.37.1.1 (A:) Adenylat 40.7 5.5 0.0004 35.8 2.2 32 104-135 9-46 (194)
83 d1ye8a1 c.37.1.11 (A:1-178) Hy 40.3 3.5 0.00026 36.0 0.7 15 106-120 3-17 (178)
84 d1yj5a2 c.37.1.1 (A:351-522) 5 40.2 4 0.00029 36.7 1.1 16 104-119 15-30 (172)
85 d1nkpa_ a.38.1.1 (A:) Myc prot 39.7 50 0.0036 26.1 7.9 42 387-428 42-83 (88)
86 d1khta_ c.37.1.1 (A:) Adenylat 39.3 4.4 0.00032 35.0 1.2 18 103-120 1-18 (190)
87 d1qf9a_ c.37.1.1 (A:) UMP/CMP 38.9 4.5 0.00033 36.2 1.3 29 105-133 8-42 (194)
88 d1qvra3 c.37.1.20 (A:536-850) 38.2 8.9 0.00064 38.0 3.5 16 105-120 55-70 (315)
89 d1zp6a1 c.37.1.25 (A:6-181) Hy 38.0 4.1 0.0003 35.2 0.8 16 105-120 6-21 (176)
90 d1zaka1 c.37.1.1 (A:3-127,A:15 37.9 5.2 0.00038 35.7 1.5 15 106-120 6-20 (189)
91 d1a5ta2 c.37.1.20 (A:1-207) de 36.8 8.8 0.00064 35.3 3.0 28 94-121 14-42 (207)
92 d1ak2a1 c.37.1.1 (A:14-146,A:1 36.6 5.6 0.00041 35.5 1.5 32 101-134 3-40 (190)
93 d2bmfa2 c.37.1.14 (A:178-482) 36.3 5.3 0.00038 38.0 1.3 19 100-120 8-26 (305)
94 d1tf7a1 c.37.1.11 (A:14-255) C 35.5 7.2 0.00053 35.0 2.1 26 94-119 14-42 (242)
95 d1w36d1 c.37.1.19 (D:2-360) Ex 35.3 4.9 0.00036 40.8 0.9 25 95-121 157-181 (359)
96 d1svma_ c.37.1.20 (A:) Papillo 35.1 8.2 0.00059 39.2 2.6 17 104-120 155-171 (362)
97 d1bifa1 c.37.1.7 (A:37-249) 6- 35.0 5.6 0.00041 35.4 1.2 17 104-120 3-19 (213)
98 d1r6bx3 c.37.1.20 (X:437-751) 34.8 9.9 0.00072 37.5 3.2 17 104-120 53-69 (315)
99 d1s3ga1 c.37.1.1 (A:1-125,A:16 34.5 6.7 0.00049 34.7 1.7 29 106-134 3-37 (182)
100 d1ckea_ c.37.1.1 (A:) CMP kina 34.2 6.5 0.00048 35.3 1.6 32 105-136 5-42 (225)
101 d1w36b1 c.37.1.19 (B:1-485) Ex 34.2 5.2 0.00038 40.3 0.9 22 101-122 14-35 (485)
102 d1hv8a1 c.37.1.19 (A:3-210) Pu 33.9 8.8 0.00064 35.2 2.5 25 95-120 35-59 (208)
103 d1um8a_ c.37.1.20 (A:) ClpX {H 33.4 5.3 0.00039 40.6 0.8 19 102-120 67-85 (364)
104 d1lw7a2 c.37.1.1 (A:220-411) T 32.4 4.8 0.00035 34.5 0.3 16 105-120 9-24 (192)
105 d2ak3a1 c.37.1.1 (A:0-124,A:16 31.4 8.6 0.00063 34.7 1.9 28 106-133 9-42 (189)
106 d1teva_ c.37.1.1 (A:) UMP/CMP 31.2 7.1 0.00052 34.8 1.2 29 105-133 3-37 (194)
107 d2cdna1 c.37.1.1 (A:1-181) Ade 31.0 8.3 0.00061 34.0 1.7 28 106-133 3-36 (181)
108 d1mkya1 c.37.1.8 (A:2-172) Pro 30.9 6.5 0.00048 34.3 0.9 17 104-120 1-17 (171)
109 d1w44a_ c.37.1.11 (A:) NTPase 30.8 10 0.00073 38.0 2.4 18 104-121 124-141 (321)
110 d1m7ga_ c.37.1.4 (A:) Adenosin 30.4 10 0.00073 35.1 2.2 20 100-119 21-40 (208)
111 d1rz3a_ c.37.1.6 (A:) Hypothet 30.0 13 0.00091 32.4 2.7 18 103-120 22-39 (198)
112 d1t5la1 c.37.1.19 (A:2-414) Nu 29.8 16 0.0011 37.8 3.8 81 70-155 3-97 (413)
113 d1u94a1 c.37.1.11 (A:6-268) Re 29.7 8.5 0.00062 37.3 1.6 31 90-120 37-71 (263)
114 d1akya1 c.37.1.1 (A:3-130,A:16 27.9 9.2 0.00067 33.8 1.4 29 106-134 5-39 (180)
115 d1zina1 c.37.1.1 (A:1-125,A:16 27.7 10 0.00075 33.0 1.7 28 106-133 3-36 (182)
116 d1e6ca_ c.37.1.2 (A:) Shikimat 27.1 8.4 0.00061 33.8 0.9 16 105-120 4-19 (170)
117 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 27.0 9 0.00065 40.1 1.3 16 106-121 27-42 (623)
118 d1lrza1 a.2.7.4 (A:245-309) Me 26.7 82 0.006 24.0 6.7 27 401-427 34-60 (65)
119 d1e4va1 c.37.1.1 (A:1-121,A:15 25.8 11 0.00082 33.0 1.5 28 106-133 3-36 (179)
120 d1gkya_ c.37.1.1 (A:) Guanylat 25.7 8.6 0.00062 34.5 0.7 15 106-120 4-18 (186)
121 d1viaa_ c.37.1.2 (A:) Shikimat 25.2 9.5 0.00069 33.3 0.9 15 106-120 3-17 (161)
122 d1l2ta_ c.37.1.12 (A:) MJ0796 25.1 11 0.00081 35.9 1.5 15 106-120 34-48 (230)
123 d1uklc_ a.38.1.1 (C:) SREBP-2 23.9 1.3E+02 0.0092 22.1 7.3 53 365-420 4-56 (61)
124 d1nksa_ c.37.1.1 (A:) Adenylat 23.9 9.5 0.00069 32.9 0.6 15 106-120 4-18 (194)
125 d1rifa_ c.37.1.23 (A:) DNA hel 23.3 9.1 0.00066 37.2 0.4 27 94-122 121-147 (282)
126 d1v5wa_ c.37.1.11 (A:) Meiotic 22.8 14 0.001 33.4 1.6 30 91-120 22-54 (258)
127 d1xp8a1 c.37.1.11 (A:15-282) R 22.6 13 0.00097 36.0 1.5 31 90-120 40-74 (268)
128 d1ux5a_ a.207.1.1 (A:) Bni1 {B 22.5 85 0.0062 31.4 8.0 140 278-431 223-371 (411)
129 d1h65a_ c.37.1.8 (A:) Chloropl 22.3 11 0.0008 35.9 0.8 17 104-120 33-49 (257)
130 d2cxxa1 c.37.1.8 (A:2-185) GTP 22.2 11 0.00081 32.7 0.7 17 104-120 1-17 (184)
131 d1lvga_ c.37.1.1 (A:) Guanylat 22.0 11 0.00081 33.9 0.7 14 106-119 3-16 (190)
132 d1ji0a_ c.37.1.12 (A:) Branche 21.9 14 0.001 35.2 1.5 20 106-125 35-57 (240)
133 d1q3ta_ c.37.1.1 (A:) CMP kina 21.7 15 0.0011 33.0 1.6 31 106-136 6-42 (223)
134 d3dhwc1 c.37.1.12 (C:1-240) Me 21.6 14 0.001 35.4 1.3 19 106-124 34-55 (240)
135 d1v9da_ a.207.1.1 (A:) Diaphan 21.6 51 0.0038 32.2 5.9 96 323-431 185-281 (332)
136 d2pmka1 c.37.1.12 (A:467-707) 21.4 14 0.0011 35.1 1.5 19 106-124 32-53 (241)
137 d2onka1 c.37.1.12 (A:1-240) Mo 20.2 13 0.00097 35.6 0.9 17 108-124 29-48 (240)
No 1
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=100.00 E-value=3.5e-80 Score=672.99 Aligned_cols=340 Identities=37% Similarity=0.544 Sum_probs=296.5
Q ss_pred CeEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCCCCCCCCcccccCeecCCCCChhHHHhhhhHHHHHHhhcCCC
Q 004378 24 KILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLREGSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSVVSGIN 103 (758)
Q Consensus 24 ~IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~~~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N 103 (758)
+|+|+|||||+.+.|...+....+.+.++.++...... ..++.|.||+||+++++|++||+. +.|+|+++++|||
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~----~~~~~f~FD~vf~~~~~q~~vy~~-v~~lv~~~l~G~n 75 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKD----DKAKQHMYDRVFDGNATQDDVFED-TKYLVQSAVDGYN 75 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSS----SSEEEEECSEEECTTCCHHHHHHT-TTHHHHHHHTTCE
T ss_pred CeEEEEEcCCCChhhcccCCCCeEEeCCCCeEEecCCC----CCceEEECCeecCCCCCHHHHHHH-HHHHHHHHhcCCc
Confidence 69999999999999998888888888888887665432 235789999999999999999987 5899999999999
Q ss_pred eeEEeeccCCCCcccccC------CCCcchHHHHHHHHHhcc-ccceEEEeehhhhhhhhhhcccCCCC---CCCccccC
Q 004378 104 SSIFAYGQTSSGKTYTMT------GITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDN---TPLRLLDD 173 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM~------Gii~rav~dLF~~i~~~~-~~~~~V~vS~lEIYnE~V~DLL~~~~---~~l~i~ed 173 (758)
+||||||||||||||||+ ||+|+++.+||..+.... ...|.|++||+|||||+|+|||.+.. ..+.++++
T Consensus 76 ~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~ 155 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKD 155 (364)
T ss_dssp EEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEEC
T ss_pred eeeeccccCCCCcccccccCccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccccccccceeec
Confidence 999999999999999997 599999999999998655 46899999999999999999998755 35788999
Q ss_pred CCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCceeEEEEEEEEEcC
Q 004378 174 PEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVDLA 253 (758)
Q Consensus 174 ~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~~~skL~fVDLA 253 (758)
+.++++|.|++++.|.++++++.+|..|.++|+++.|.+|..|||||+||+++|++... .......++|+|||||
T Consensus 156 ~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~-----~~~~~~~~kl~~vDLA 230 (364)
T d1sdma_ 156 SKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNL-----QTQAIARGKLSFVDLA 230 (364)
T ss_dssp TTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEET-----TTCCEEEEEEEEEECC
T ss_pred ccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEecc-----CcceeeeEEEEeechh
Confidence 99999999999999999999999999999999999999999999999999999987643 3345678999999999
Q ss_pred CCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEEeecCCCcccHHHH
Q 004378 254 GSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVEQT 333 (758)
Q Consensus 254 GSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mIatISPs~~~~eET 333 (758)
||||..++++.|.+++|+.+||+||++|++||.+|+++. .|||||+||||+||+|+|||||+|+|||||||+..+++||
T Consensus 231 GsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~-~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eT 309 (364)
T d1sdma_ 231 GSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGN-QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDET 309 (364)
T ss_dssp CCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTC-SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHH
T ss_pred hccccccccccCceeeeccccccchhhHHHHHHHHHcCC-CcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHH
Confidence 999999999999999999999999999999999999865 5999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccceeccccCHHHHHHHHHHHHHHHHHHhc
Q 004378 334 RNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKELARLESELR 377 (758)
Q Consensus 334 lsTLrFA~rAk~Ikn~~~vN~~~s~~~li~~Lq~Ei~~L~~eL~ 377 (758)
++||+||++||+|+|+|.+|+... .+.+|+++++.|++++.
T Consensus 310 l~TL~fa~~ak~i~n~p~~n~~~~---~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 310 HNSLTYASRVRSIVNDPSKNVSSK---EVARLKKLVSYWKEQAG 350 (364)
T ss_dssp HHHHHHHHHHTTCCCCCCCCEECH---HHHHHHTTTTCC-----
T ss_pred HHHHHHHHHHhhcccCCcccCCHH---HHHHHHHHHHHHHHHHH
Confidence 999999999999999999998752 35667777777666553
No 2
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=100.00 E-value=4.5e-80 Score=669.22 Aligned_cols=329 Identities=35% Similarity=0.522 Sum_probs=304.9
Q ss_pred CCCCCeEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCCCCCCCCcccccCeecCCCCChhHHHhhhhHHHHHHhh
Q 004378 20 AREEKILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLREGSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSVV 99 (758)
Q Consensus 20 ~~~e~IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~~~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~vl 99 (758)
...++|+|+|||||+.+.|...+....+.+.+..++.+... ...+.|+||+||+++++|++||+.++.|+|++++
T Consensus 2 ~~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~-----~~~~~f~FD~vf~~~~~q~~vy~~~~~plv~~~l 76 (354)
T d1goja_ 2 SSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSK-----EAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDIL 76 (354)
T ss_dssp CSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECST-----TCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHT
T ss_pred CCCCCEEEEEEcCCCChHHHhcCCceEEEEECCCeEEEcCC-----CCcceEECCeEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 45688999999999999999888777787777788776443 2246899999999999999999999999999999
Q ss_pred cCCCeeEEeeccCCCCcccccC----------CCCcchHHHHHHHHHhcc-ccceEEEeehhhhhhhhhhcccCCCCCCC
Q 004378 100 SGINSSIFAYGQTSSGKTYTMT----------GITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDNTPL 168 (758)
Q Consensus 100 ~G~N~tIfAYGqTGSGKTyTM~----------Gii~rav~dLF~~i~~~~-~~~~~V~vS~lEIYnE~V~DLL~~~~~~l 168 (758)
+|||+||||||||||||||||+ |++|+++.+||..+.... ...|.|++||+|||||+|+|||.+....+
T Consensus 77 ~G~n~ti~aYG~tgSGKT~Tm~G~~~~~~~~~Giipr~l~~l~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~l 156 (354)
T d1goja_ 77 NGYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNL 156 (354)
T ss_dssp TTCCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHTSCTTEEEEEEEEEEEEETTEEEETTSTTCCSC
T ss_pred ccCceeEEecccCCCCcceeeecccccCcccceecchhHHHHhhhhcccccCceEEEEeehhheecceEeecccccccce
Confidence 9999999999999999999997 478999999999987554 46899999999999999999999999999
Q ss_pred ccccCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCceeEEEEEE
Q 004378 169 RLLDDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVN 248 (758)
Q Consensus 169 ~i~ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~~~skL~ 248 (758)
.+++++.++++|.|++++.|.+++++..++..|..+|.+++|.+|..|||||+||+|+|.+... .......++|+
T Consensus 157 ~~~e~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~-----~~~~~~~s~l~ 231 (354)
T d1goja_ 157 PVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNV-----ETGSAKSGQLF 231 (354)
T ss_dssp CEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEET-----TTTEEEEEEEE
T ss_pred eeeeecCCCEeecCceeecchhHHHHHHHHhhcccccccccccccccccccceEEEEEEEEeec-----CCCCeEEEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987643 23456789999
Q ss_pred EEEcCCCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEEeecCCCcc
Q 004378 249 FVDLAGSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARS 328 (758)
Q Consensus 249 fVDLAGSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mIatISPs~~ 328 (758)
||||||+|+..++++.|.+++|+..||+||++|++||.+|++++..|||||+||||+||+|+|||||+|+|||||||+..
T Consensus 232 ~vDLAGsE~~~~~~~~~~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~iPyR~SkLT~lLkd~Lgg~s~t~~I~~isp~~~ 311 (354)
T d1goja_ 232 LVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSY 311 (354)
T ss_dssp EEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGG
T ss_pred EeeccCcccccccCCccchhhhhhhhhHHHHHHHHHHHHHhcCCCCcCCcccCHHHHHHHHhcCCCCeEEEEEEECCCcc
Confidence 99999999999999999999999999999999999999999988789999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcccccceeccccCH
Q 004378 329 HVEQTRNTLLFACCAKEVTTKAQVNVVMSD 358 (758)
Q Consensus 329 ~~eETlsTLrFA~rAk~Ikn~~~vN~~~s~ 358 (758)
+++||++||+||++||+|+|+|++|+..+.
T Consensus 312 ~~~eTl~TL~fa~~~~~i~~~~~~n~~~~~ 341 (354)
T d1goja_ 312 NDAETLSTLRFGMRAKSIKNKAKVNAELSP 341 (354)
T ss_dssp GHHHHHHHHHHHHHHHTCBCCCCCCSSSSC
T ss_pred cHHHHHHHHHHHHHHhccCccceEcCCCCH
Confidence 999999999999999999999999987654
No 3
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=100.00 E-value=2e-77 Score=651.01 Aligned_cols=316 Identities=33% Similarity=0.470 Sum_probs=262.7
Q ss_pred CCCCCeEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCCC----CCCCCcccccCeecCCCCChhHHHhhhhHHHH
Q 004378 20 AREEKILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLRE----GSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIA 95 (758)
Q Consensus 20 ~~~e~IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~~----~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV 95 (758)
..+++|+|+|||||+++.|...++...|.+.++.++.+..+... ....++.|.||+||+++++|++||+.++.|+|
T Consensus 27 ~~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~Q~~Vy~~~~~plv 106 (362)
T d1v8ka_ 27 IEEHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLV 106 (362)
T ss_dssp TSCCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCCCEEEEEEeCCCChHHhhCCCceEEEECCCcEEEEeCCccccccccCcCceeEeCCeecCCCCCHHHHHHHHHHHHH
Confidence 34679999999999999999888888888877777776543211 11124689999999999999999999999999
Q ss_pred HHhhcCCCeeEEeeccCCCCcccccCC------------CCcchHHHHHHHHHhcc--ccceEEEeehhhhhhhhhhccc
Q 004378 96 LSVVSGINSSIFAYGQTSSGKTYTMTG------------ITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLL 161 (758)
Q Consensus 96 ~~vl~G~N~tIfAYGqTGSGKTyTM~G------------ii~rav~dLF~~i~~~~--~~~~~V~vS~lEIYnE~V~DLL 161 (758)
+++++|||+||||||||||||||||+| |+|+++++||..+.... ...|.|++||+|||||+|+|||
T Consensus 107 ~~~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL 186 (362)
T d1v8ka_ 107 QTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLL 186 (362)
T ss_dssp HHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETT
T ss_pred HHHHhccCceEEeeccCCCCCceeeeecCCCCcccccCCeeeehhhhHHHHhhcccccccchhheeeeeeecCCeEEecc
Confidence 999999999999999999999999965 78999999999987543 4589999999999999999999
Q ss_pred CCCCCCCccccCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCce
Q 004378 162 STDNTPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENST 241 (758)
Q Consensus 162 ~~~~~~l~i~ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~ 241 (758)
.+. ..+.+++++.+++++.|++++.|.++++++.++..|..+|++++|.+|..|||||+||+|.|.+..
T Consensus 187 ~~~-~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~i~~i~i~~~~---------- 255 (362)
T d1v8ka_ 187 NKK-AKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG---------- 255 (362)
T ss_dssp TTT-EEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSS----------
T ss_pred cCC-ccccccccccCCcccCCCEEEEecCHHHHHHHHhccccccccccccCcccCcceeeEEEEEEEecc----------
Confidence 754 457788999999999999999999999999999999999999999999999999999999997532
Q ss_pred eEEEEEEEEEcCCCcccccccc-hhhhhhhhhhcchhHHHHHHHHHHhccCCCCcccCCCCccccccccc-CCCCcceeE
Q 004378 242 TLSASVNFVDLAGSERASQALS-TGARLKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPC-LGGNARTAI 319 (758)
Q Consensus 242 ~~~skL~fVDLAGSEr~~~t~s-~g~rlkEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqds-LGGNskT~m 319 (758)
...++|+|||||||||..++.. .+.+++|+.+||+||++|++||.+|++++ .|||||+||||+||||+ |||||+|+|
T Consensus 256 ~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~-~hiPyR~SkLT~lLkdsllGgns~t~~ 334 (362)
T d1v8ka_ 256 RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNK-AHTPFRESKLTQVLRDSFIGENSRTCM 334 (362)
T ss_dssp SEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC-------CCCCHHHHHTTHHHHSSSEEEEE
T ss_pred eeeeeEeeeecccccccccccccchhhhhhhhhhcccHHHHHHHHHHHhcCC-CcCCCccCHHHHhhhhccCCCCccEEE
Confidence 3568999999999999988754 44688899999999999999999999864 59999999999999998 799999999
Q ss_pred EeecCCCcccHHHHHHHHHHHHHhhccc
Q 004378 320 ICTLSPARSHVEQTRNTLLFACCAKEVT 347 (758)
Q Consensus 320 IatISPs~~~~eETlsTLrFA~rAk~Ik 347 (758)
||||||+..+++||++||+||+|||+|.
T Consensus 335 i~~vsp~~~~~~eTl~TL~fa~rak~It 362 (362)
T d1v8ka_ 335 IAMISPGISSCEYTLNTLRYADRVKELS 362 (362)
T ss_dssp EEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCChhhHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999984
No 4
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=100.00 E-value=1.3e-76 Score=639.79 Aligned_cols=322 Identities=36% Similarity=0.494 Sum_probs=270.9
Q ss_pred CeEEEEEcCCCCchhhhcCCCCceEeeCC-cEEEeecCCCCCCCCCcccccCeecCCCCChhHHHhhhhHHHHHHhhcCC
Q 004378 24 KILVLVRLRPLSEKEITADEATDWECIND-TTILYRNTLREGSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSVVSGI 102 (758)
Q Consensus 24 ~IrV~VRVRPl~~~E~~~~~~~~~~~~~~-~ti~~~~~~~~~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~ 102 (758)
+|+|+|||||+++.|...+....+.+... ..+.+...........+.|.||+||+++++|++||+.++.|+|+++++||
T Consensus 1 NI~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~~~~~lv~~~l~G~ 80 (345)
T d1x88a1 1 NIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGY 80 (345)
T ss_dssp CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEECCCChhhhccCCCeEEEEcCCCceEEEecCCCCCCCCcceEecCEEeCCCCCHHHHHHHHHHHhHHHHhccC
Confidence 69999999999999988887777776543 45555443222223346899999999999999999999999999999999
Q ss_pred CeeEEeeccCCCCcccccC-----------------CCCcchHHHHHHHHHhccccceEEEeehhhhhhhhhhcccCCCC
Q 004378 103 NSSIFAYGQTSSGKTYTMT-----------------GITECTVADIFDYIHRHEERAFVLKFSAMEIYNEAIRDLLSTDN 165 (758)
Q Consensus 103 N~tIfAYGqTGSGKTyTM~-----------------Gii~rav~dLF~~i~~~~~~~~~V~vS~lEIYnE~V~DLL~~~~ 165 (758)
|+||||||||||||||||+ ||+||++.+||..+... ...|.|++||+|||||+|+|||++..
T Consensus 81 n~~i~aYGqtgSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~lf~~~~~~-~~~~~v~vS~~EIy~e~v~DLL~~~~ 159 (345)
T d1x88a1 81 NCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDN-GTEFSVKVSLLEIYNEELFDLLNPSS 159 (345)
T ss_dssp EEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTSSS-SEEEEEEEEEEEEETTEEEETTCTTS
T ss_pred CceEEeeeeccccceEEeeecCCcccccccccCccCCcHHHHHHHHHHhhhcc-CceEEEEEEEEEEECCeeEECCCCCC
Confidence 9999999999999999995 78999999999987654 46799999999999999999998654
Q ss_pred C-----CCccccCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCc
Q 004378 166 T-----PLRLLDDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENS 240 (758)
Q Consensus 166 ~-----~l~i~ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~ 240 (758)
. .+...++..++++|.||+++.|.+++|++.+|..|.++|+++.|.+|..|||||+||+|+|...... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~SsRsH~i~~i~i~~~~~~--~~~~~ 237 (345)
T d1x88a1 160 DVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETT--IDGEE 237 (345)
T ss_dssp CTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEEC--TTSCE
T ss_pred cccccceeeecccCCCCEEEcCCEEEEeCCHHHHHHHHHhhhccccccccCccccccccceEEEEEEEEeecc--CCCCC
Confidence 2 2345566778899999999999999999999999999999999999999999999999999875432 22334
Q ss_pred eeEEEEEEEEEcCCCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEE
Q 004378 241 TTLSASVNFVDLAGSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAII 320 (758)
Q Consensus 241 ~~~~skL~fVDLAGSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mI 320 (758)
....|+|+|||||||||..++...|.+++|+.+||+||++|++||.+|+++ ..|||||+||||+||+|+|||||+|+||
T Consensus 238 ~~~~s~l~~vDLAGsEr~~~~~~~~~~~~e~~~in~Sl~~L~~vi~al~~~-~~~iPyR~SkLT~lL~d~Lgg~s~t~~i 316 (345)
T d1x88a1 238 LVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVER-TPHVPYRESKLTRILQDSLGGRTRTSII 316 (345)
T ss_dssp EEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHTT-CSCCCGGGSHHHHHTGGGSSSSSEEEEE
T ss_pred ceEeeeEEEEecCCccccccccchhhhhcccccccchHHHHHHHHHHHhcC-CCcCCCccCHHHHHhHHhcCCCCcEEEE
Confidence 567899999999999999999999999999999999999999999999986 4599999999999999999999999999
Q ss_pred eecCCCcccHHHHHHHHHHHHHhhccccc
Q 004378 321 CTLSPARSHVEQTRNTLLFACCAKEVTTK 349 (758)
Q Consensus 321 atISPs~~~~eETlsTLrFA~rAk~Ikn~ 349 (758)
|||||+..+++||++||+||++||+|+|+
T Consensus 317 ~~vsp~~~~~~eTl~tL~fa~~~~~I~nk 345 (345)
T d1x88a1 317 ATISPASLNLEETLSTLEYAHRAKNILNK 345 (345)
T ss_dssp EEECCCGGGHHHHHHHHHHHHHHTTCCCC
T ss_pred EEeCCchhhHHHHHHHHHHHHHhhhccCC
Confidence 99999999999999999999999999986
No 5
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7.2e-76 Score=628.60 Aligned_cols=310 Identities=40% Similarity=0.578 Sum_probs=290.3
Q ss_pred CCCeEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCCCCCCCCcccccCeecCCCCChhHHHhhhhHHHHHHhhcC
Q 004378 22 EEKILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLREGSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSVVSG 101 (758)
Q Consensus 22 ~e~IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~~~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~vl~G 101 (758)
+-+|+|+|||||+++.|...++...+.+.++.++... ++.|+||+||+++++|++||+.+++|+|+++++|
T Consensus 4 ~~NI~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~~~~---------~~~f~FD~vf~~~~~q~~vf~~~~~~lv~~~l~G 74 (323)
T d1bg2a_ 4 ECNIKVMCRFRPLNESEVNRGDKYIAKFQGEDTVVIA---------SKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEG 74 (323)
T ss_dssp SCEEEEEEEECCCCHHHHHHTCCBCCEEETTTEEEET---------TEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTT
T ss_pred CCCEEEEEEeCCCChHHhccCCceEEEECCCCeEEEC---------CceeECCEEECCCCCHHHHHHHHHHHHHHHHHcC
Confidence 4579999999999999988888888888888887652 3589999999999999999999999999999999
Q ss_pred CCeeEEeeccCCCCcccccCC---------CCcchHHHHHHHHHhcc-ccceEEEeehhhhhhhhhhcccCCCCCCCccc
Q 004378 102 INSSIFAYGQTSSGKTYTMTG---------ITECTVADIFDYIHRHE-ERAFVLKFSAMEIYNEAIRDLLSTDNTPLRLL 171 (758)
Q Consensus 102 ~N~tIfAYGqTGSGKTyTM~G---------ii~rav~dLF~~i~~~~-~~~~~V~vS~lEIYnE~V~DLL~~~~~~l~i~ 171 (758)
||+||||||||||||||||+| ++|+++.+||..+.... ...|.|++||+|||||+|||||.+...++.++
T Consensus 75 ~n~~i~aYGqtgSGKTyT~~G~~~~~~~~gii~r~l~~l~~~~~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~~ 154 (323)
T d1bg2a_ 75 YNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVH 154 (323)
T ss_dssp CCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHHCSSEEEEEEEEEEEEETTEEEESSCTTCCSBCEE
T ss_pred CCcceeeecccCCCCceeccCCcccccccchhhhHHHHHHhhhhccccccceEEEEEEEEEEcCcccccccccccceeEe
Confidence 999999999999999999975 88999999999998654 46899999999999999999999999999999
Q ss_pred cCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCceeEEEEEEEEE
Q 004378 172 DDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNFVD 251 (758)
Q Consensus 172 ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~~~skL~fVD 251 (758)
+++.+++++.|++++.|.++++++.++..|.++|+++.|.+|..|||||+||+++|.+... .......|+|+|||
T Consensus 155 ~~~~~~~~v~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~ssRsh~i~~i~v~~~~~-----~~~~~~~s~l~~vD 229 (323)
T d1bg2a_ 155 EDKNRVPYVKGCTERFVCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENT-----QTEQKLSGKLYLVD 229 (323)
T ss_dssp ECTTSCEEETTCCCEEECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEET-----TTCCEEEEEEEEEE
T ss_pred eccccceeecCCEEEEEeccHhHhHHhhhcccceeecccCCCCCCCccceEEEEEEEEEeC-----CCCcEEEEEEEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987643 23456789999999
Q ss_pred cCCCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEEeecCCCcccHH
Q 004378 252 LAGSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSHVE 331 (758)
Q Consensus 252 LAGSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mIatISPs~~~~e 331 (758)
|||+|+..+++..+.+++|+..||+||++|++||.+|++++ .|||||+||||+||+|+||||++|+||+||||+..+++
T Consensus 230 LAGse~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~~-~~iPyR~SkLT~lL~d~L~g~~~t~~I~~isp~~~~~~ 308 (323)
T d1bg2a_ 230 LAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGS-TYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNES 308 (323)
T ss_dssp CCCSCCCCCCSSSCTTSCCCCCCCHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHH
T ss_pred cccccccccccchhhhhhhhhcccccHHHHHHHHHHHhcCC-CccCCccCHHHHHHHHhcCCCccEEEEEEECCcchhHH
Confidence 99999999999999999999999999999999999999865 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcc
Q 004378 332 QTRNTLLFACCAKEV 346 (758)
Q Consensus 332 ETlsTLrFA~rAk~I 346 (758)
||++||+||+|||+|
T Consensus 309 eTl~tL~fa~r~k~I 323 (323)
T d1bg2a_ 309 ETKSTLLFGQRAKTI 323 (323)
T ss_dssp HHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999987
No 6
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=100.00 E-value=1.3e-75 Score=632.98 Aligned_cols=318 Identities=36% Similarity=0.578 Sum_probs=277.9
Q ss_pred CeEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCCCCCCCCcccccCeecCCC--------CChhHHHhhhhHHHH
Q 004378 24 KILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLREGSTFPSAYTFDRVFWGD--------CSTTQVYEDGAKEIA 95 (758)
Q Consensus 24 ~IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~~~s~~~~~F~FD~VF~~~--------asQ~eVy~~~v~plV 95 (758)
.|+|+|||||+.++|...+....+.+.++.++++... .....++.|.||+|||++ ++|++||+.++.|+|
T Consensus 2 sIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~--~~~~~~k~f~FD~vf~~~~~~~~~~~~sQ~~vy~~~~~plv 79 (349)
T d2zfia1 2 SVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPK--QPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEML 79 (349)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTT--CTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHH
T ss_pred cEEEEEEeCCCChhHhcCCCcEEEEECCCcEEEECCC--CCCcCCeeEEeceEeCCCCCccccccccHHHHHHHhhHHHH
Confidence 5999999999999998888888888777776665432 222345789999999987 579999999999999
Q ss_pred HHhhcCCCeeEEeeccCCCCcccccC--------CCCcchHHHHHHHHHhcc--ccceEEEeehhhhhhhhhhcccCCCC
Q 004378 96 LSVVSGINSSIFAYGQTSSGKTYTMT--------GITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDN 165 (758)
Q Consensus 96 ~~vl~G~N~tIfAYGqTGSGKTyTM~--------Gii~rav~dLF~~i~~~~--~~~~~V~vS~lEIYnE~V~DLL~~~~ 165 (758)
+++++|||+||||||||||||||||+ ||+|+++.+||..++... ...+.|.+||+|||||+|||||++..
T Consensus 80 ~~~l~G~n~ti~aYGqTgSGKT~Tm~G~~~~~~~Glipr~l~~lf~~~~~~~~~~~~~~v~~S~~Eiyne~i~DLL~~~~ 159 (349)
T d2zfia1 80 QHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKN 159 (349)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTT
T ss_pred HHHHhccCceeeeeccCCCCCceeeccCccccccCchHHHHhhhhhhccccccCCcceEEEEEeeeeeCCEEEecccccc
Confidence 99999999999999999999999996 589999999999998654 45789999999999999999998754
Q ss_pred -CCCccccCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCceeEE
Q 004378 166 -TPLRLLDDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLS 244 (758)
Q Consensus 166 -~~l~i~ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~~~ 244 (758)
..+.+++++.++++|.|++++.|.++++++.+|..|..+|+++.|.+|..|||||+||+|.+.+..... .........
T Consensus 160 ~~~~~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssrsh~i~~i~i~~~~~~~-~~~~~~~~~ 238 (349)
T d2zfia1 160 KGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDA-ETNITTEKV 238 (349)
T ss_dssp CSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECT-TTTCEEEEE
T ss_pred cCCceEEecCCCCcEEEEeEEEeccCHHHHHHHHHhcccCeEeccCCCccccccccceEEEEEEEEeccc-CCCccccee
Confidence 578999999999999999999999999999999999999999999999999999999999998765432 222334567
Q ss_pred EEEEEEEcCCCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccC-----------CCCcccCCCCcccccccccCCC
Q 004378 245 ASVNFVDLAGSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKG-----------RNGHINYRDSKLTRMLQPCLGG 313 (758)
Q Consensus 245 skL~fVDLAGSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~-----------~~~hIPYRdSKLTrLLqdsLGG 313 (758)
|+|+||||||+||..+++..|.+++|+.+||+||++|++||.+|++. +..|||||+|||||||||+|||
T Consensus 239 s~l~~VDLAGsEr~~~~~~~g~~~~e~~~IN~SL~~L~~vi~aL~~~~~~~~~~~~~~~~~~IPyR~SkLT~lL~d~Lgg 318 (349)
T d2zfia1 239 SKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGG 318 (349)
T ss_dssp EEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSST
T ss_pred eEEEEeecccchhhhhcCCcccchhhccchhhHHHHHHHHHHHHHhhhcccccccccCCCCccCCcCCHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999742 3359999999999999999999
Q ss_pred CcceeEEeecCCCcccHHHHHHHHHHHHHhh
Q 004378 314 NARTAIICTLSPARSHVEQTRNTLLFACCAK 344 (758)
Q Consensus 314 NskT~mIatISPs~~~~eETlsTLrFA~rAk 344 (758)
||+|+|||||||+..+++||++||+||+|||
T Consensus 319 ~s~t~~I~~vsp~~~~~~eTl~TL~fa~rak 349 (349)
T d2zfia1 319 NSRTAMVAALSPADINYDETLSTLRYADRAK 349 (349)
T ss_dssp TCEEEEEEEECCBGGGHHHHHHHHHHHHHTC
T ss_pred CccEEEEEEeCCChhhHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999997
No 7
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00 E-value=1.4e-74 Score=620.62 Aligned_cols=311 Identities=33% Similarity=0.465 Sum_probs=270.8
Q ss_pred eEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCCC----CCCCCcccccCeecCCCCChhHHHhhhhHHHHHHhh-
Q 004378 25 ILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLRE----GSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSVV- 99 (758)
Q Consensus 25 IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~~----~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~vl- 99 (758)
|+|+|||||+.+.|...++...+.+.++.++.+..+... .....+.|.||+||+++++|++||+.+++|+|.+++
T Consensus 2 IkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~v~~~~~~~~~~~~~~~~~F~fD~Vf~~~~~q~~vy~~~~~plv~~~~~ 81 (330)
T d1ry6a_ 2 IKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLYE 81 (330)
T ss_dssp EEEEEEECCCCHHHHHTTCCBCEEEEETTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHHH
T ss_pred EEEEEEeCCCChHHHhcCCceEEEECCCcEEEEcCCccccccccCcCcceEeCCeecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 899999999999999888888888888888776543210 111235899999999999999999999999999988
Q ss_pred cCCCeeEEeeccCCCCcccccC-----------CCCcchHHHHHHHHHhc-cccceEEEeehhhhhhhhhhcccCCCCCC
Q 004378 100 SGINSSIFAYGQTSSGKTYTMT-----------GITECTVADIFDYIHRH-EERAFVLKFSAMEIYNEAIRDLLSTDNTP 167 (758)
Q Consensus 100 ~G~N~tIfAYGqTGSGKTyTM~-----------Gii~rav~dLF~~i~~~-~~~~~~V~vS~lEIYnE~V~DLL~~~~~~ 167 (758)
+|||+||||||||||||||||+ ||+|+++.+||..+... ....|.|.+||+|||||+|+|||++. ..
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm~G~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~v~~S~~EIyne~i~DLL~~~-~~ 160 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKR-KM 160 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHHHHHHHCSSSCEEEEEEEEEEETTEEEESCCC----
T ss_pred cCCCeEEEeeeccccccceeeecccccccccCCCchhHHHhhhhhhhhhhcccceEEEEEEEEeeeccccccccccc-cc
Confidence 5999999999999999999995 58899999999998654 45689999999999999999999764 46
Q ss_pred CccccCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCceeEEEEE
Q 004378 168 LRLLDDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASV 247 (758)
Q Consensus 168 l~i~ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~~~skL 247 (758)
+.+++++.+++++.|++++.|.++++++.+|..|..+|.++.|.+|..|||||+||+|.+..... ....++|
T Consensus 161 ~~~~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRsh~i~~i~v~~~~~--------~~~~s~l 232 (330)
T d1ry6a_ 161 VAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINK--------NTSLGKI 232 (330)
T ss_dssp --------CCBCGGGSCCEEECSHHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTT--------TEEEEEE
T ss_pred ceeeecCCCCccccCceEEEEeeccchhhhhhcccccccccccccccccCCcceEEEEEEEeccc--------cccccee
Confidence 77889999999999999999999999999999999999999999999999999999999976432 2457999
Q ss_pred EEEEcCCCcccccccchhhhh-hhhhhcchhHHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEEeecCCC
Q 004378 248 NFVDLAGSERASQALSTGARL-KEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPA 326 (758)
Q Consensus 248 ~fVDLAGSEr~~~t~s~g~rl-kEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mIatISPs 326 (758)
+|||||||||..++.+.+.+. .|+..||+||++|++||.+|++++ .|||||+||||+||||+|||||+|+|||||||+
T Consensus 233 ~~vDLAGsEr~~~~~~~~~~~~~e~~~IN~sL~~L~~vi~al~~~~-~~iPyR~SkLT~lL~d~lggns~t~~I~~vsp~ 311 (330)
T d1ry6a_ 233 AFIDLAGSERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDK-NHIPFRDSELTKVLRDIFVGKSKSIMIANISPT 311 (330)
T ss_dssp EEEECCCTTGGGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHHTTST-TSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCB
T ss_pred eeecccccccccccccCCchhhhhhhhhhHHHHHHHHHHHHHhcCC-CcCCCccCHHHHHHHHhcCCCCeEEEEEEECCc
Confidence 999999999999988887764 699999999999999999998865 599999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHHHHhhc
Q 004378 327 RSHVEQTRNTLLFACCAKE 345 (758)
Q Consensus 327 ~~~~eETlsTLrFA~rAk~ 345 (758)
..+++||++||+||+|||.
T Consensus 312 ~~~~~eTl~tL~fa~rak~ 330 (330)
T d1ry6a_ 312 ISCCEQTLNTLRYSSRVKN 330 (330)
T ss_dssp GGGHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHHHHHHHHHHhcC
Confidence 9999999999999999974
No 8
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=100.00 E-value=9.7e-74 Score=616.81 Aligned_cols=319 Identities=32% Similarity=0.473 Sum_probs=256.6
Q ss_pred CCeEEEEEcCCCCchhhhcCCCCceEeeC---CcEEE-eecCCCCCCCCCcccccCeecCCCCChhHHHhhhhHHHHHHh
Q 004378 23 EKILVLVRLRPLSEKEITADEATDWECIN---DTTIL-YRNTLREGSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSV 98 (758)
Q Consensus 23 e~IrV~VRVRPl~~~E~~~~~~~~~~~~~---~~ti~-~~~~~~~~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~v 98 (758)
++|+|+|||||+.+.|.. .+...+.+.. ...+. ............+.|.||+||+++++|++||+. +.|+|+.+
T Consensus 1 G~IrV~vRvRP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~-v~~~v~~~ 78 (342)
T d1f9va_ 1 GNIRVYCRIRPALKNLEN-SDTSLINVNEFDDNSGVQSMEVTKIQNTAQVHEFKFDKIFDQQDTNVDVFKE-VGQLVQSS 78 (342)
T ss_dssp CEEEEEEEECCCCTTTCC-CTTEEEEECCCBTTTTBEEEEEEEGGGTTCEEEEEESEEECTTCCHHHHHHH-HHHHHGGG
T ss_pred CcEEEEEEeCcCCccccc-CCCceEEeeccCCcceeeeccccccCCCCCceEeecCeEeCCCCCHHHHHHH-hhhhhcch
Confidence 579999999999877643 2232232221 11111 000111122345789999999999999999997 55999999
Q ss_pred hcCCCeeEEeeccCCCCcccccC----CCCcchHHHHHHHHHhc--cccceEEEeehhhhhhhhhhcccCCCCC------
Q 004378 99 VSGINSSIFAYGQTSSGKTYTMT----GITECTVADIFDYIHRH--EERAFVLKFSAMEIYNEAIRDLLSTDNT------ 166 (758)
Q Consensus 99 l~G~N~tIfAYGqTGSGKTyTM~----Gii~rav~dLF~~i~~~--~~~~~~V~vS~lEIYnE~V~DLL~~~~~------ 166 (758)
++|||+||||||||||||||||+ |++|+++.+||..+... ....|.|++||+|||||+|||||.+...
T Consensus 79 l~G~n~~i~aYGqtgSGKT~T~~G~~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~v~DLL~~~~~~~~~~~ 158 (342)
T d1f9va_ 79 LDGYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTS 158 (342)
T ss_dssp GGTCCEEEEEECCTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC----------
T ss_pred hcccccceeeeeccCCccccccccCcCchhHHHHHHHHhhhhhhhccccccceeeeeeeeccCeeEECCCCCCCcccccc
Confidence 99999999999999999999997 59999999999999854 3568899999999999999999986543
Q ss_pred ---CCccc-cCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCcee
Q 004378 167 ---PLRLL-DDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTT 242 (758)
Q Consensus 167 ---~l~i~-ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~ 242 (758)
.+.++ ++..++++|.|++++.|.++++++.++..|.++|.++.|.+|..|||||+||+|.|..... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~N~~ssrSh~i~~i~v~~~~~-----~~~~~ 233 (342)
T d1f9va_ 159 IGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNA-----KTGAH 233 (342)
T ss_dssp ---CCCEEEETTTTEEEETTCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC-------CCE
T ss_pred ccceeeeeecCCCCcEEEeeeEEEEecchHHHHHHHhhhhhccccccccccccCcccceeEEEEEEEecC-----Cccce
Confidence 13333 4556789999999999999999999999999999999999999999999999999987532 23446
Q ss_pred EEEEEEEEEcCCCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccC--CCCcccCCCCcccccccccCCCCcceeEE
Q 004378 243 LSASVNFVDLAGSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKG--RNGHINYRDSKLTRMLQPCLGGNARTAII 320 (758)
Q Consensus 243 ~~skL~fVDLAGSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~--~~~hIPYRdSKLTrLLqdsLGGNskT~mI 320 (758)
..++|+||||||+|+..++...+.+++|+.+||+||++|++||.+|+++ ...|||||+||||+||||+||||++|+||
T Consensus 234 ~~s~l~~vDLAGse~~~~~~~~~~~~~e~~~iN~Sl~~L~~vi~aL~~~~~~~~~iPyR~SkLT~lL~d~lgg~s~t~~I 313 (342)
T d1f9va_ 234 SYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMF 313 (342)
T ss_dssp EEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEE
T ss_pred eeeeeeeeeccCCcccccccchhhhhhhhhhccHHHHHHHHHHHHHhcccCCCCcCCCccCHHHHHHHHhcCCCceEEEE
Confidence 7899999999999999999999999999999999999999999999864 34599999999999999999999999999
Q ss_pred eecCCCcccHHHHHHHHHHHHHhhcccc
Q 004378 321 CTLSPARSHVEQTRNTLLFACCAKEVTT 348 (758)
Q Consensus 321 atISPs~~~~eETlsTLrFA~rAk~Ikn 348 (758)
|||||+..+++||++||+||+|||+|+.
T Consensus 314 ~~vsp~~~~~~eTl~TL~fa~r~~~i~~ 341 (342)
T d1f9va_ 314 VNISPSSSHINETLNSLRFASKVNSTRL 341 (342)
T ss_dssp EEECCSGGGHHHHHHHHHHHHHHCCTTT
T ss_pred EEECCchhhHHHHHHHHHHHHHhhccee
Confidence 9999999999999999999999999974
No 9
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=100.00 E-value=2e-72 Score=612.61 Aligned_cols=312 Identities=35% Similarity=0.533 Sum_probs=266.7
Q ss_pred CCCeEEEEEcCCCCchhhhcCCCCceEeeCCcEEEeecCCC--CCCCCCcccccCeecCCCCChhHHHhhhhHHHHHHhh
Q 004378 22 EEKILVLVRLRPLSEKEITADEATDWECINDTTILYRNTLR--EGSTFPSAYTFDRVFWGDCSTTQVYEDGAKEIALSVV 99 (758)
Q Consensus 22 ~e~IrV~VRVRPl~~~E~~~~~~~~~~~~~~~ti~~~~~~~--~~s~~~~~F~FD~VF~~~asQ~eVy~~~v~plV~~vl 99 (758)
.++|+|+|||||+++.|.... ...+...++.++.+..... ......+.|.||+||+++++|++||+. +.|+|++++
T Consensus 44 ~gnIkV~vRvRP~~~~E~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~F~FD~vf~~~~~Q~~Vy~~-v~plv~~vl 121 (368)
T d2ncda_ 44 RGNIRVFCRIRPPLESEENRM-CCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEM-VSPLIQSAL 121 (368)
T ss_dssp HCSEEEEEEECCCCGGGTTSC-BCEEEEETTTEEEEECSCHHHHTTTCCCEEECSEEECTTCCHHHHHTT-THHHHHHHH
T ss_pred cCCEEEEEEeCCCCchhcCCC-CcEEEeCCCCeEEEccCCccccCCcCceeeECCeEECCCCCccchHHH-HHHHHHHHh
Confidence 458999999999999986443 3445555666666543221 122335789999999999999999975 579999999
Q ss_pred cCCCeeEEeeccCCCCcccccC------CCCcchHHHHHHHHHhcc--ccceEEEeehhhhhhhhhhcccCCCCCC--Cc
Q 004378 100 SGINSSIFAYGQTSSGKTYTMT------GITECTVADIFDYIHRHE--ERAFVLKFSAMEIYNEAIRDLLSTDNTP--LR 169 (758)
Q Consensus 100 ~G~N~tIfAYGqTGSGKTyTM~------Gii~rav~dLF~~i~~~~--~~~~~V~vS~lEIYnE~V~DLL~~~~~~--l~ 169 (758)
+|||+||||||||||||||||+ ||+|+++.+||+.+.... ...|.|.+||+|||||+|+|||.+.... ..
T Consensus 122 ~G~n~ti~aYGqtGSGKT~Tm~G~~~~~Giipr~~~~Lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~~~~~~~~~ 201 (368)
T d2ncda_ 122 DGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIR 201 (368)
T ss_dssp TTCEEEEEEECSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSSCEEETTCSSCCCCCEE
T ss_pred cccceeEEeeccCCCccceEecccccccchhhHHHHHHhhhhhhhccccccceEEEEEEEEecceeecccccccccccce
Confidence 9999999999999999999998 799999999999998654 4678999999999999999999887654 45
Q ss_pred cccCCCCcEEEcccEEEEecCHHHHHHHHHHhhhhcccccccccCCCCCceeEEEEEEEeecccccCCCCceeEEEEEEE
Q 004378 170 LLDDPEKGVVVEKVTEEILKDWNHLKELLSICEAQRRIGETLLNEKSSRSHQIIRLMIESSAREFLGKENSTTLSASVNF 249 (758)
Q Consensus 170 i~ed~~~gv~V~gLte~~V~S~ee~~~lL~~g~~~R~~~~T~~N~~SSRSH~IftL~Ve~~~~~~~~~~~~~~~~skL~f 249 (758)
+++++.+++++.|++++.|.+++++..++..|.++|..+.|.+|..|||||+||+|+|..... .......|+|+|
T Consensus 202 ~~~d~~~~~~v~g~~~~~v~~~~~~~~~l~~g~~~r~~~~t~~n~~ssrSh~i~~i~v~~~~~-----~~~~~~~s~l~~ 276 (368)
T d2ncda_ 202 MAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHA-----EKQEISVGSINL 276 (368)
T ss_dssp ECTTCTTCEEETTCCCEEECSHHHHHHHHHHHHHHSCCCSSSCTTTTTTCEEEEEEEEEEECT-----TSCCEEEEEEEE
T ss_pred eeccccccccccccceeccCCHHHHHHHHHHHHhhcccccccccccccccceEEEEEEEEEec-----CCCceEeeeeee
Confidence 668999999999999999999999999999999999999999999999999999999987532 334567899999
Q ss_pred EEcCCCcccccccchhhhhhhhhhcchhHHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEEeecCCCccc
Q 004378 250 VDLAGSERASQALSTGARLKEGCHINRSLLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIICTLSPARSH 329 (758)
Q Consensus 250 VDLAGSEr~~~t~s~g~rlkEg~~INkSL~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mIatISPs~~~ 329 (758)
|||||+|+... +.+++|+.+||+||++|++||.+|++++ .|||||+||||+||+|+||||++|+||+||||+..+
T Consensus 277 VDLAGse~~~~----~~~~~E~~~IN~SL~aL~~vi~aL~~~~-~~iPyR~SkLT~lL~dsLggns~t~mI~~isp~~~~ 351 (368)
T d2ncda_ 277 VDLAGSESPKT----STRMTETKNINRSLSELTNVILALLQKQ-DHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDC 351 (368)
T ss_dssp EECCCCCCC--------------CTTHHHHHHHHHHHHHHTTC-SCCCGGGSHHHHHHGGGSSSSCEEEEEEEECCBGGG
T ss_pred eeeccccccch----hhhhcccccchhhHHHHHHHHHHHhcCC-CCCCCcCCHHHHHHHHhcCCCCeEEEEEEECCChhh
Confidence 99999998754 5789999999999999999999999864 599999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhc
Q 004378 330 VEQTRNTLLFACCAKE 345 (758)
Q Consensus 330 ~eETlsTLrFA~rAk~ 345 (758)
++||++||+||+|||+
T Consensus 352 ~~eTl~TL~fa~rak~ 367 (368)
T d2ncda_ 352 FQESVKSLRFAASVNS 367 (368)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999985
No 10
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.36 E-value=0.026 Score=56.01 Aligned_cols=51 Identities=16% Similarity=0.144 Sum_probs=39.7
Q ss_pred ccccCeecCCCCChhHHHhhhhHHHHH-Hhhc--C--CCeeEEeeccCCCCccccc
Q 004378 70 AYTFDRVFWGDCSTTQVYEDGAKEIAL-SVVS--G--INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 70 ~F~FD~VF~~~asQ~eVy~~~v~plV~-~vl~--G--~N~tIfAYGqTGSGKTyTM 120 (758)
.++||.|.+-+.--+++.+.+..++.. ..+. | +...|+-||+.|+|||+.+
T Consensus 3 ~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~ 58 (265)
T d1r7ra3 3 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLA 58 (265)
T ss_dssp CCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHH
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHH
Confidence 478999999888888898887777652 3333 2 3457999999999999986
No 11
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=93.30 E-value=0.022 Score=54.75 Aligned_cols=50 Identities=32% Similarity=0.443 Sum_probs=35.0
Q ss_pred ccccCeecCCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCcccccCC
Q 004378 70 AYTFDRVFWGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTMTG 122 (758)
Q Consensus 70 ~F~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G 122 (758)
.|+||.-|-. ..++..|.. ++.+++..-.++| .++-||++|+||||-+.+
T Consensus 6 ~~tFdnF~vg-~~N~~a~~~-~~~~~~~~~~~~n-~l~l~G~~G~GKTHLl~A 55 (213)
T d1l8qa2 6 KYTLENFIVG-EGNRLAYEV-VKEALENLGSLYN-PIFIYGSVGTGKTHLLQA 55 (213)
T ss_dssp TCCSSSCCCC-TTTHHHHHH-HHHHHHTTTTSCS-SEEEECSSSSSHHHHHHH
T ss_pred CCChhhccCC-CcHHHHHHH-HHHHHhCcCCCCC-cEEEECCCCCcHHHHHHH
Confidence 6899986643 346666654 5556655444555 389999999999998754
No 12
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=90.28 E-value=0.068 Score=50.98 Aligned_cols=36 Identities=22% Similarity=0.094 Sum_probs=24.6
Q ss_pred HHhhhhHHHHHHhhcCCCe-----eEEeeccCCCCcccccC
Q 004378 86 VYEDGAKEIALSVVSGINS-----SIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 86 Vy~~~v~plV~~vl~G~N~-----tIfAYGqTGSGKTyTM~ 121 (758)
-++.++.-+...++.|-.. .++.||++|+|||+++.
T Consensus 24 e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~ 64 (287)
T d1w5sa2 24 EAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAK 64 (287)
T ss_dssp HHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHH
Confidence 3444444455666666544 46789999999999973
No 13
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=87.33 E-value=0.13 Score=50.74 Aligned_cols=46 Identities=24% Similarity=0.276 Sum_probs=30.1
Q ss_pred ccccCeecCCCCChhHHHhhhhHHHHHHh-----h----cCCCeeEEeeccCCCCccccc
Q 004378 70 AYTFDRVFWGDCSTTQVYEDGAKEIALSV-----V----SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 70 ~F~FD~VF~~~asQ~eVy~~~v~plV~~v-----l----~G~N~tIfAYGqTGSGKTyTM 120 (758)
..+||-|.+.+..-+++ ..+|.-+ + ....-.|+-||++|+|||++.
T Consensus 8 ~~t~~Di~Gl~~~k~~l-----~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la 62 (256)
T d1lv7a_ 8 KTTFADVAGCDEAKEEV-----AELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLA 62 (256)
T ss_dssp CCCGGGSCSCHHHHHHT-----HHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHH
T ss_pred CCCHHHHhchHHHHHHH-----HHHHHHHHCHHHHHHcCCCCCCeEEeeCCCCCCccHHH
Confidence 46888888875444444 2233322 1 234567999999999999987
No 14
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=86.67 E-value=0.17 Score=48.18 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=22.1
Q ss_pred hHHHHHHhhcCCCe-----eEEeeccCCCCccccc
Q 004378 91 AKEIALSVVSGINS-----SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 91 v~plV~~vl~G~N~-----tIfAYGqTGSGKTyTM 120 (758)
....+..++.|... .|+-||++|||||+..
T Consensus 15 ~~~~~~~~~~~~~~~~~P~~ilL~GpPGtGKT~la 49 (273)
T d1gvnb_ 15 LNDNLEELIQGKKAVESPTAFLLGGQPGSGKTSLR 49 (273)
T ss_dssp HHHHHHHHHTTCCCCSSCEEEEEECCTTSCTHHHH
T ss_pred HHHHHHHHHhcccCCCCCEEEEEECCCCCCHHHHH
Confidence 44455556666655 4999999999999975
No 15
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=84.81 E-value=0.23 Score=48.41 Aligned_cols=50 Identities=20% Similarity=0.237 Sum_probs=34.4
Q ss_pred ccccCeecCCCCChhHHHhhhhHHHHHHhhcCCC---eeEEeeccCCCCccccc
Q 004378 70 AYTFDRVFWGDCSTTQVYEDGAKEIALSVVSGIN---SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 70 ~F~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N---~tIfAYGqTGSGKTyTM 120 (758)
.|--+.+++....-..|.+. +..+++.+..+-+ .+|+-||++|+|||+..
T Consensus 5 ~~~~~~~i~~~~~i~~i~~~-~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 5 SYIMNGIIKWGDPVTRVLDD-GELLVQQTKNSDRTPLVSVLLEGPPHSGKTALA 57 (246)
T ss_dssp TTCTTCCCCCSHHHHHHHHH-HHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHH
T ss_pred HhhccCCcCcCHHHHHHHHH-HHHHHHHHhccCCCCCeEEEEECcCCCCHHHHH
Confidence 46667776655444555554 5566766665554 47999999999999874
No 16
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=83.43 E-value=0.25 Score=48.18 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=30.0
Q ss_pred cccCeecCCCCChhHHHhhhhHHHHH-Hhhc----CCCeeEEeeccCCCCccccc
Q 004378 71 YTFDRVFWGDCSTTQVYEDGAKEIAL-SVVS----GINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 71 F~FD~VF~~~asQ~eVy~~~v~plV~-~vl~----G~N~tIfAYGqTGSGKTyTM 120 (758)
.+||-|.+-+...+.+ .+.+.++.. ..+. .....|+-||+.|+|||+..
T Consensus 6 ~~~~di~G~~~~k~~l-~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la 59 (247)
T d1ixza_ 6 VTFKDVAGAEEAKEEL-KEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLA 59 (247)
T ss_dssp CCGGGCCSCHHHHHHH-HHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHH
T ss_pred CcHHHHccHHHHHHHH-HHHHHHHHCHHHHHHcCCCCCceEEEecCCCCChhHHH
Confidence 6888888755333333 334443321 1222 23346999999999999986
No 17
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.40 E-value=0.25 Score=48.26 Aligned_cols=49 Identities=22% Similarity=0.272 Sum_probs=31.0
Q ss_pred ccCeecCCCCChhHHHhhhhHHHHH-Hhhc--CC--CeeEEeeccCCCCccccc
Q 004378 72 TFDRVFWGDCSTTQVYEDGAKEIAL-SVVS--GI--NSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 72 ~FD~VF~~~asQ~eVy~~~v~plV~-~vl~--G~--N~tIfAYGqTGSGKTyTM 120 (758)
+||-|-+-+..-+++-+.+..|+.. ..+. |. .-.|+-||+.|||||+..
T Consensus 2 ~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~ 55 (258)
T d1e32a2 2 GYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIA 55 (258)
T ss_dssp CGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHH
T ss_pred ChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHH
Confidence 5777777664444555544444432 2333 32 346999999999999876
No 18
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=83.12 E-value=0.23 Score=51.83 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCCeeEEeeccCCCCcccccCC
Q 004378 92 KEIALSVVSGINSSIFAYGQTSSGKTYTMTG 122 (758)
Q Consensus 92 ~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G 122 (758)
...+..++..-++.|+.-|+||||||.||..
T Consensus 147 ~~~l~~l~~~~~GliLvtGpTGSGKSTTl~~ 177 (401)
T d1p9ra_ 147 HDNFRRLIKRPHGIILVTGPTGSGKSTTLYA 177 (401)
T ss_dssp HHHHHHHHTSSSEEEEEECSTTSCHHHHHHH
T ss_pred HHHHHHHHhhhhceEEEEcCCCCCccHHHHH
Confidence 3456778889999999999999999999865
No 19
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=80.85 E-value=0.57 Score=43.90 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=24.2
Q ss_pred HHHHHhhc---CCCeeEEeeccCCCCcccccCCCCcchHHHHHHHHHh
Q 004378 93 EIALSVVS---GINSSIFAYGQTSSGKTYTMTGITECTVADIFDYIHR 137 (758)
Q Consensus 93 plV~~vl~---G~N~tIfAYGqTGSGKTyTM~Gii~rav~dLF~~i~~ 137 (758)
.++...+. +....++-||++|+|||++ ++.|...+..
T Consensus 30 ~~l~~~l~~~~~~~~~lll~GppGtGKT~l--------~~~l~~~l~~ 69 (276)
T d1fnna2 30 ILLGNWLRNPGHHYPRATLLGRPGTGKTVT--------LRKLWELYKD 69 (276)
T ss_dssp HHHHHHHHSTTSSCCEEEEECCTTSSHHHH--------HHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCceEEECCCCCCHHHH--------HHHHHHHHhc
Confidence 34444443 3345799999999999987 3445555543
No 20
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.33 E-value=0.4 Score=44.80 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=27.1
Q ss_pred ccCeecCCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCcccccCC
Q 004378 72 TFDRVFWGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTMTG 122 (758)
Q Consensus 72 ~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~G 122 (758)
+||.+.+.+ .....+...+-.+....++-||++|+|||.+..-
T Consensus 10 ~~~diig~~--------~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~ 52 (237)
T d1sxjd2 10 NLDEVTAQD--------HAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILA 52 (237)
T ss_dssp STTTCCSCC--------TTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHH
T ss_pred CHHHccCcH--------HHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHH
Confidence 566665543 2223333333345556699999999999998644
No 21
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=76.74 E-value=0.54 Score=44.05 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=26.9
Q ss_pred ccCeecCCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 72 TFDRVFWGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 72 ~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
+||.+.+. +++-+ .+...+-.|....++-||+.|+|||.++
T Consensus 22 ~~~diig~----~~~~~----~l~~~i~~~~~~~lll~Gp~G~GKTtla 62 (231)
T d1iqpa2 22 RLDDIVGQ----EHIVK----RLKHYVKTGSMPHLLFAGPPGVGKTTAA 62 (231)
T ss_dssp STTTCCSC----HHHHH----HHHHHHHHTCCCEEEEESCTTSSHHHHH
T ss_pred CHHHccCc----HHHHH----HHHHHHHcCCCCeEEEECCCCCcHHHHH
Confidence 56666653 33333 3333334566667899999999999875
No 22
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.48 E-value=0.67 Score=43.79 Aligned_cols=25 Identities=28% Similarity=0.526 Sum_probs=20.6
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.| |++.++||||||++.
T Consensus 40 aip~il~g~d--vl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 40 AIMPIIEGHD--VLAQAQSGTGKTGTF 64 (212)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHcCCC--EEeecccccchhhhh
Confidence 4566789998 677789999999986
No 23
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.43 E-value=0.71 Score=43.51 Aligned_cols=20 Identities=30% Similarity=0.506 Sum_probs=16.2
Q ss_pred CCCeeEEeeccCCCCccccc
Q 004378 101 GINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 101 G~N~tIfAYGqTGSGKTyTM 120 (758)
|.--.++-||++|+|||.+.
T Consensus 50 ~~~~~lll~GPpG~GKTt~a 69 (253)
T d1sxja2 50 GVFRAAMLYGPPGIGKTTAA 69 (253)
T ss_dssp TSCSEEEEECSTTSSHHHHH
T ss_pred CCCceEEEECCCCCCHHHHH
Confidence 33456999999999999875
No 24
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=73.32 E-value=0.48 Score=45.22 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=16.8
Q ss_pred CCCeeEEeeccCCCCcccccC
Q 004378 101 GINSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 101 G~N~tIfAYGqTGSGKTyTM~ 121 (758)
+....|+..|+||+|||.|+.
T Consensus 4 ~~~~vi~lvGptGvGKTTTia 24 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIA 24 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHH
Confidence 444567778999999999963
No 25
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=72.74 E-value=0.54 Score=44.57 Aligned_cols=26 Identities=19% Similarity=0.006 Sum_probs=19.8
Q ss_pred HHHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 93 EIALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 93 plV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
..+..++.|.|..|. ++||||||.+.
T Consensus 50 ~~i~~~l~g~~~~i~--apTGsGKT~~~ 75 (237)
T d1gkub1 50 MWAKRILRKESFAAT--APTGVGKTSFG 75 (237)
T ss_dssp HHHHHHHTTCCEECC--CCBTSCSHHHH
T ss_pred HHHHHHHCCCCEEEE--ecCCChHHHHH
Confidence 456778899986555 69999999653
No 26
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=71.18 E-value=0.4 Score=44.35 Aligned_cols=23 Identities=26% Similarity=0.330 Sum_probs=17.4
Q ss_pred HHhhcCCCeeEEeeccCCCCccccc
Q 004378 96 LSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 96 ~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
+.+++|.|+.|. -+||||||..+
T Consensus 35 ~~~l~g~~vlv~--apTGsGKT~~~ 57 (206)
T d1oywa2 35 DTVLSGRDCLVV--MPTGGGKSLCY 57 (206)
T ss_dssp HHHHTTCCEEEE--CSCHHHHHHHH
T ss_pred HHHHcCCCEEEE--cCCCCCCcchh
Confidence 457889886444 59999999764
No 27
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=70.17 E-value=0.88 Score=42.34 Aligned_cols=25 Identities=24% Similarity=0.395 Sum_probs=19.9
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.| |++.++||||||...
T Consensus 31 aip~il~g~d--vi~~a~tGsGKTlay 55 (206)
T d1s2ma1 31 AIPVAITGRD--ILARAKNGTGKTAAF 55 (206)
T ss_dssp HHHHHHHTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHHcCCC--EEEecCCcchhhhhh
Confidence 3456788998 788889999999764
No 28
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=69.94 E-value=0.93 Score=41.64 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=24.7
Q ss_pred hHHHHHHhhcC---CCeeEEeeccCCCCccccc
Q 004378 91 AKEIALSVVSG---INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 91 v~plV~~vl~G---~N~tIfAYGqTGSGKTyTM 120 (758)
+-+-++.++.| .+..++-||++|||||+-.
T Consensus 19 Gi~~LD~ll~GGi~~G~~~li~G~pGsGKT~l~ 51 (251)
T d1szpa2 19 GSKNLDTLLGGGVETGSITELFGEFRTGKSQLC 51 (251)
T ss_dssp SCHHHHHHHTSSEESSSEEEEEESTTSSHHHHH
T ss_pred CCHHHHhhhCCCCcCCeEEEEEcCCCCCHHHHH
Confidence 44567888888 6778999999999999765
No 29
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.53 E-value=0.93 Score=42.44 Aligned_cols=25 Identities=16% Similarity=0.300 Sum_probs=19.1
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.|. ++-.+||||||.+.
T Consensus 31 aip~il~g~dv--l~~A~TGsGKTla~ 55 (207)
T d1t6na_ 31 CIPQAILGMDV--LCQAKSGMGKTAVF 55 (207)
T ss_dssp HHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHcCCCe--EEEecccccccccc
Confidence 45567899985 45559999999875
No 30
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=69.48 E-value=0.52 Score=43.52 Aligned_cols=23 Identities=35% Similarity=0.361 Sum_probs=18.0
Q ss_pred HHHhhcCCCeeEEeeccCCCCcccc
Q 004378 95 ALSVVSGINSSIFAYGQTSSGKTYT 119 (758)
Q Consensus 95 V~~vl~G~N~tIfAYGqTGSGKTyT 119 (758)
+..+++|.| ++..++||||||++
T Consensus 34 i~~l~~~~~--~il~apTGsGKT~~ 56 (202)
T d2p6ra3 34 VEKVFSGKN--LLLAMPTAAGKTLL 56 (202)
T ss_dssp HHHHTTCSC--EEEECSSHHHHHHH
T ss_pred HHHHHcCCC--EEEEcCCCCchhHH
Confidence 455678877 46678999999976
No 31
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=69.34 E-value=0.8 Score=38.42 Aligned_cols=15 Identities=20% Similarity=0.113 Sum_probs=12.1
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
++.+++||||||+++
T Consensus 10 ~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 10 TVLDFHPGAGKTRRF 24 (140)
T ss_dssp EEECCCTTSSTTTTH
T ss_pred EEEEcCCCCChhHHH
Confidence 356678999999875
No 32
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.86 E-value=1.1 Score=41.96 Aligned_cols=25 Identities=20% Similarity=0.170 Sum_probs=19.2
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.|+. +..+||||||.+.
T Consensus 33 aip~il~g~dvl--~~a~TGsGKTlay 57 (206)
T d1veca_ 33 SIPIALSGRDIL--ARAKNGTGKSGAY 57 (206)
T ss_dssp HHHHHHTTCCEE--EECCSSSTTHHHH
T ss_pred HHHHHHcCCCEE--eeccCcccccccc
Confidence 455678999865 4559999999775
No 33
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=68.62 E-value=1.3 Score=41.27 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=26.8
Q ss_pred ccCeecCCCCChhHHHhhhhHHHHHHhh-c-CCCeeEEeeccCCCCccccc
Q 004378 72 TFDRVFWGDCSTTQVYEDGAKEIALSVV-S-GINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 72 ~FD~VF~~~asQ~eVy~~~v~plV~~vl-~-G~N~tIfAYGqTGSGKTyTM 120 (758)
+||.|.+ |+++-+. .+.++.... . ..-..++-||++|+|||.+.
T Consensus 7 ~~~divG----qe~~~~~-l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA 52 (238)
T d1in4a2 7 SLDEFIG----QENVKKK-LSLALEAAKMRGEVLDHVLLAGPPGLGKTTLA 52 (238)
T ss_dssp SGGGCCS----CHHHHHH-HHHHHHHHHHHTCCCCCEEEESSTTSSHHHHH
T ss_pred cHHHcCC----hHHHHHH-HHHHHHHHHhcCCCCCeEEEECCCCCcHHHHH
Confidence 5777765 4555443 334444332 2 23345677999999999864
No 34
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=67.95 E-value=0.72 Score=39.76 Aligned_cols=16 Identities=31% Similarity=0.339 Sum_probs=13.6
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+.+|++|||||+..
T Consensus 4 lIii~G~pGsGKTTla 19 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWA 19 (152)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778999999999963
No 35
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.50 E-value=1.2 Score=41.30 Aligned_cols=41 Identities=29% Similarity=0.432 Sum_probs=24.9
Q ss_pred ccCeecCCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 72 TFDRVFWGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 72 ~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
+||.+.+ |+++.+. |-..+-.|.-..++-||++|+|||.+.
T Consensus 12 ~~~divg----~~~~~~~----L~~~i~~~~~~~lLl~Gp~G~GKttl~ 52 (227)
T d1sxjc2 12 TLDEVYG----QNEVITT----VRKFVDEGKLPHLLFYGPPGTGKTSTI 52 (227)
T ss_dssp SGGGCCS----CHHHHHH----HHHHHHTTCCCCEEEECSSSSSHHHHH
T ss_pred CHHHccC----cHHHHHH----HHHHHHcCCCCeEEEECCCCCChhHHH
Confidence 4566654 3444433 222233555555778999999999763
No 36
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=66.92 E-value=1.2 Score=41.33 Aligned_cols=29 Identities=17% Similarity=0.188 Sum_probs=20.5
Q ss_pred HHHHhhcCCCeeEEeeccCCCCcccccCC
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTMTG 122 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM~G 122 (758)
|...+-+|....++-||+.|+|||.+...
T Consensus 27 L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~ 55 (224)
T d1sxjb2 27 LQQIAKDGNMPHMIISGMPGIGKTTSVHC 55 (224)
T ss_dssp HHHHHHSCCCCCEEEECSTTSSHHHHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCCchhhHHH
Confidence 33334456655688899999999988643
No 37
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=66.52 E-value=0.75 Score=42.56 Aligned_cols=25 Identities=28% Similarity=0.364 Sum_probs=18.9
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.| |++-.+||||||.+.
T Consensus 31 aip~~l~G~d--vii~a~TGSGKTlay 55 (209)
T d1q0ua_ 31 IIPGALRGES--MVGQSQTGTGKTHAY 55 (209)
T ss_dssp HHHHHHHTCC--EEEECCSSHHHHHHH
T ss_pred HHHHHHCCCC--eEeecccccccceee
Confidence 3445678988 455679999999865
No 38
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=66.04 E-value=1.6 Score=40.76 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=27.1
Q ss_pred ccCeecCCCCChhHHHhhhhHHHHHHhhcC--CCeeEEeeccCCCCccccc
Q 004378 72 TFDRVFWGDCSTTQVYEDGAKEIALSVVSG--INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 72 ~FD~VF~~~asQ~eVy~~~v~plV~~vl~G--~N~tIfAYGqTGSGKTyTM 120 (758)
+||.|.+. +++-+. .+.++.....+ .-..++-||++|+|||.++
T Consensus 7 ~~ddivGq----~~~~~~-L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla 52 (239)
T d1ixsb2 7 TLDEYIGQ----ERLKQK-LRVYLEAAKARKEPLEHLLLFGPPGLGKTTLA 52 (239)
T ss_dssp SGGGSCSC----HHHHHH-HHHHHHHHTTSSSCCCCEEEECCTTSCHHHHH
T ss_pred CHHHhCCH----HHHHHH-HHHHHHHHHhcCCCCCeEEEECCCCCCHHHHH
Confidence 57777654 444333 34445444332 2345777999999999775
No 39
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=65.83 E-value=0.97 Score=43.15 Aligned_cols=18 Identities=28% Similarity=0.309 Sum_probs=10.7
Q ss_pred eeEEeeccCCCCcccccC
Q 004378 104 SSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM~ 121 (758)
..|+-.|+||+|||.|+.
T Consensus 13 ~vi~lvGptGvGKTTTiA 30 (211)
T d1j8yf2 13 YVIMLVGVQGTGKATTAG 30 (211)
T ss_dssp EEEEEECSCCC----HHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 456667999999999963
No 40
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=64.84 E-value=1.7 Score=41.99 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=29.7
Q ss_pred cCCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 77 FWGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 77 F~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
|....+|..++++ +..++-.+.-...+-+|.||||||-..
T Consensus 54 ~~lt~~Q~~~~~~----i~~~~~~~~~~~~LL~GdvGsGKT~V~ 93 (233)
T d2eyqa3 54 FETTPDQAQAINA----VLSDMCQPLAMDRLVCGDVGFGKTEVA 93 (233)
T ss_dssp SCCCHHHHHHHHH----HHHHHHSSSCCEEEEECCCCTTTHHHH
T ss_pred cccchhHHHHHHH----HHHHHhccCccCeEEEcCCCCCcHHHH
Confidence 4445567766665 556667888888899999999999653
No 41
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.67 E-value=0.81 Score=39.90 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=14.0
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.||-+|+.|+|||+++
T Consensus 3 ~v~ItG~~GtGKTtl~ 18 (189)
T d2i3ba1 3 HVFLTGPPGVGKTTLI 18 (189)
T ss_dssp CEEEESCCSSCHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 4788899999999985
No 42
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=63.74 E-value=1.3 Score=41.15 Aligned_cols=37 Identities=8% Similarity=0.150 Sum_probs=25.3
Q ss_pred ChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 82 STTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 82 sQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
..+++|.. ...++.+.++...+|+-||+.|+|||..+
T Consensus 10 ~~~~f~GR--~~el~~l~~~~~~~i~i~G~~G~GKTsLl 46 (283)
T d2fnaa2 10 NRKDFFDR--EKEIEKLKGLRAPITLVLGLRRTGKSSII 46 (283)
T ss_dssp SGGGSCCC--HHHHHHHHHTCSSEEEEEESTTSSHHHHH
T ss_pred ChhhCCCh--HHHHHHHHhccCCEEEEEcCCCCcHHHHH
Confidence 34444432 22344555667788999999999999875
No 43
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.97 E-value=1.5 Score=41.78 Aligned_cols=25 Identities=24% Similarity=0.329 Sum_probs=19.3
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.|..+ -.+||||||.+.
T Consensus 47 aIp~il~g~dvi~--~a~TGSGKTlay 71 (222)
T d2j0sa1 47 AIKQIIKGRDVIA--QSQSGTGKTATF 71 (222)
T ss_dssp HHHHHHTTCCEEE--ECCTTSSHHHHH
T ss_pred HHHHHHCCCCeEE--EcCcchhhhhhh
Confidence 4566789998654 569999999875
No 44
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=62.69 E-value=1.4 Score=43.53 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=29.8
Q ss_pred CCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 78 WGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 78 ~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
....+|..++++ +..++-.+....-+-+|-+|||||-..
T Consensus 83 eLT~~Q~~ai~e----i~~d~~~~~~m~rLL~GdvGSGKT~Va 121 (264)
T d1gm5a3 83 KLTNAQKRAHQE----IRNDMISEKPMNRLLQGDVGSGKTVVA 121 (264)
T ss_dssp CCCHHHHHHHHH----HHHHHHSSSCCCCEEECCSSSSHHHHH
T ss_pred cCCchHHHHHHH----HHHHhhccCcceeeeeccccccccHHH
Confidence 345678777776 455666888888899999999999653
No 45
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=62.59 E-value=0.99 Score=43.13 Aligned_cols=17 Identities=35% Similarity=0.409 Sum_probs=14.4
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
..|+-.|+||+|||.|+
T Consensus 10 ~vi~lvGptGvGKTTTi 26 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTI 26 (211)
T ss_dssp EEEEEECCTTSCHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 34667899999999996
No 46
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=62.41 E-value=1.5 Score=44.26 Aligned_cols=26 Identities=31% Similarity=0.368 Sum_probs=18.3
Q ss_pred HHHHhh-cCCCeeEEeeccCCCCcccccC
Q 004378 94 IALSVV-SGINSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 94 lV~~vl-~G~N~tIfAYGqTGSGKTyTM~ 121 (758)
++..++ .|.| |+..|.||||||.+|.
T Consensus 158 ~l~~~v~~~~n--ili~G~tgSGKTT~l~ 184 (323)
T d1g6oa_ 158 AIKDGIAIGKN--VIVCGGTGSGKTTYIK 184 (323)
T ss_dssp HHHHHHHHTCC--EEEEESTTSSHHHHHH
T ss_pred HHHHHHHhCCC--EEEEeeccccchHHHH
Confidence 334333 4566 5668999999999873
No 47
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=61.92 E-value=1.6 Score=41.83 Aligned_cols=25 Identities=24% Similarity=0.226 Sum_probs=18.9
Q ss_pred HHHHhhcCCCeeEEeeccCCCCccccc
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
.+..+++|.|+.+ -.+||||||.+.
T Consensus 51 ~ip~il~g~dvvi--~a~TGsGKTlay 75 (238)
T d1wrba1 51 AIPAILEHRDIMA--CAQTGSGKTAAF 75 (238)
T ss_dssp HHHHHHTTCCEEE--ECCTTSSHHHHH
T ss_pred HhhhhhCCCCEEE--ECCCCCCcceee
Confidence 4456679998654 559999999875
No 48
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=60.83 E-value=1.1 Score=42.83 Aligned_cols=17 Identities=29% Similarity=0.413 Sum_probs=14.4
Q ss_pred eEEeeccCCCCcccccC
Q 004378 105 SIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM~ 121 (758)
.|+-.|+||+|||.|+.
T Consensus 13 vi~lvGptGvGKTTTiA 29 (213)
T d1vmaa2 13 VIMVVGVNGTGKTTSCG 29 (213)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 56778999999999963
No 49
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=60.31 E-value=1.1 Score=44.61 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=14.2
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
..|+-||+||+|||+..
T Consensus 50 ~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 50 KNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred ceEEEECCCCCCHHHHH
Confidence 55677999999999874
No 50
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=59.88 E-value=1.7 Score=40.25 Aligned_cols=26 Identities=23% Similarity=0.072 Sum_probs=17.6
Q ss_pred HHHHhhcCCCeeEEeeccCCCCcccccC
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM~ 121 (758)
.++.++++.++.|. ++||+|||+++.
T Consensus 78 av~~~~~~~~~ll~--~~tG~GKT~~a~ 103 (206)
T d2fz4a1 78 ALERWLVDKRGCIV--LPTGSGKTHVAM 103 (206)
T ss_dssp HHHHHTTTSEEEEE--ESSSTTHHHHHH
T ss_pred HHHHHHhCCCcEEE--eCCCCCceehHH
Confidence 34456666655443 589999998763
No 51
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=58.70 E-value=1.5 Score=42.08 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=15.0
Q ss_pred CeeEEeeccCCCCcccccC
Q 004378 103 NSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 103 N~tIfAYGqTGSGKTyTM~ 121 (758)
++-++..|..|||||+||.
T Consensus 14 ~~~~lI~g~aGTGKTt~l~ 32 (306)
T d1uaaa1 14 TGPCLVLAGAGSGKTRVIT 32 (306)
T ss_dssp SSEEEECCCTTSCHHHHHH
T ss_pred CCCEEEEeeCCccHHHHHH
Confidence 3446677999999999974
No 52
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=58.67 E-value=1.4 Score=42.81 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=15.1
Q ss_pred CeeEEeeccCCCCccccc
Q 004378 103 NSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 103 N~tIfAYGqTGSGKTyTM 120 (758)
.+.++.-|..|||||+|+
T Consensus 24 ~g~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 24 EGPLLIMAGAGSGKTRVL 41 (318)
T ss_dssp SSCEEEEECTTSCHHHHH
T ss_pred CCCEEEEecCCccHHHHH
Confidence 455777799999999998
No 53
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.43 E-value=2 Score=40.59 Aligned_cols=24 Identities=33% Similarity=0.506 Sum_probs=18.8
Q ss_pred HHHhhcCCCeeEEeeccCCCCccccc
Q 004378 95 ALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 95 V~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
+..++.|.|. ++-.+||||||.+.
T Consensus 43 ip~il~g~dv--l~~a~TGsGKTlay 66 (218)
T d2g9na1 43 ILPCIKGYDV--IAQAQSGTGKTATF 66 (218)
T ss_dssp HHHHHHTCCE--EEECCTTSSHHHHH
T ss_pred HHHHHcCCCE--EEEcccchhhhhhh
Confidence 4456789985 55669999999886
No 54
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=57.82 E-value=1.3 Score=41.89 Aligned_cols=16 Identities=44% Similarity=0.430 Sum_probs=13.6
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+-.|+||+|||+|+
T Consensus 12 vi~lvGp~GvGKTTTi 27 (207)
T d1ls1a2 12 LWFLVGLQGSGKTTTA 27 (207)
T ss_dssp EEEEECCTTTTHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566799999999996
No 55
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.39 E-value=1.9 Score=40.31 Aligned_cols=17 Identities=24% Similarity=0.516 Sum_probs=14.8
Q ss_pred eEEeeccCCCCcccccC
Q 004378 105 SIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM~ 121 (758)
.++-||+.|+|||.+..
T Consensus 35 ~lll~Gp~G~GKTt~~~ 51 (252)
T d1sxje2 35 HLLLYGPNGTGKKTRCM 51 (252)
T ss_dssp CEEEECSTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 58899999999999763
No 56
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=56.77 E-value=0.78 Score=46.94 Aligned_cols=19 Identities=21% Similarity=0.499 Sum_probs=15.7
Q ss_pred EEeeccCCCCcccccCCCC
Q 004378 106 IFAYGQTSSGKTYTMTGIT 124 (758)
Q Consensus 106 IfAYGqTGSGKTyTM~Gii 124 (758)
++.+|.||||||++|..++
T Consensus 53 ~~I~G~tGsGKT~~l~~li 71 (433)
T d1e9ra_ 53 LLVNGATGTGKSVLLRELA 71 (433)
T ss_dssp EEEEECTTSSHHHHHHHHH
T ss_pred EEEEeCCCCcHHHHHHHHH
Confidence 7889999999999875543
No 57
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=56.16 E-value=2.5 Score=39.02 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=24.2
Q ss_pred hhHHHHHHhhcC---CCeeEEeeccCCCCccccc
Q 004378 90 GAKEIALSVVSG---INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 90 ~v~plV~~vl~G---~N~tIfAYGqTGSGKTyTM 120 (758)
++-|-++.++.| .+..++-||++|||||.-.
T Consensus 20 TGi~~LD~ll~GGlp~G~~~li~G~pGsGKT~~~ 53 (254)
T d1pzna2 20 TGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLA 53 (254)
T ss_dssp CSCHHHHHHHTSSEESSEEEEEEESTTSSHHHHH
T ss_pred CCCHHHHHhhcCCccCCEEEEEEcCCCCCHHHHH
Confidence 344667788877 4568999999999999864
No 58
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=53.13 E-value=2.3 Score=44.76 Aligned_cols=16 Identities=38% Similarity=0.461 Sum_probs=14.4
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
-|+..|+||+|||+-.
T Consensus 51 NILliGPTGvGKTlLA 66 (443)
T d1g41a_ 51 NILMIGPTGVGKTEIA 66 (443)
T ss_dssp CEEEECCTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 5889999999999877
No 59
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=52.46 E-value=2.9 Score=37.63 Aligned_cols=18 Identities=28% Similarity=0.198 Sum_probs=12.7
Q ss_pred CCCeeEEeeccCCCCccccc
Q 004378 101 GINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 101 G~N~tIfAYGqTGSGKTyTM 120 (758)
+.|+ | ..++||||||++.
T Consensus 23 ~~n~-l-v~~pTGsGKT~i~ 40 (200)
T d1wp9a1 23 ETNC-L-IVLPTGLGKTLIA 40 (200)
T ss_dssp GSCE-E-EECCTTSCHHHHH
T ss_pred cCCe-E-EEeCCCCcHHHHH
Confidence 4563 3 4479999999754
No 60
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.42 E-value=1.3 Score=39.45 Aligned_cols=20 Identities=25% Similarity=0.534 Sum_probs=15.9
Q ss_pred cCC-CeeEEeeccCCCCcccc
Q 004378 100 SGI-NSSIFAYGQTSSGKTYT 119 (758)
Q Consensus 100 ~G~-N~tIfAYGqTGSGKTyT 119 (758)
.|+ .++||-.|.+|||||+.
T Consensus 15 ~~~~g~vI~L~G~pGSGKTTi 35 (195)
T d1x6va3 15 GGFRGCTVWLTGLSGAGKTTV 35 (195)
T ss_dssp CSCCCEEEEEESSCHHHHHHH
T ss_pred cCCCCeEEEEECCCCCCHHHH
Confidence 454 45788999999999874
No 61
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=49.75 E-value=2.2 Score=36.57 Aligned_cols=16 Identities=25% Similarity=0.270 Sum_probs=13.3
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+-.|.+|||||+..
T Consensus 4 lI~i~G~~GsGKTTva 19 (176)
T d2bdta1 4 LYIITGPAGVGKSTTC 19 (176)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3677899999999873
No 62
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=49.39 E-value=2.5 Score=36.43 Aligned_cols=16 Identities=38% Similarity=0.438 Sum_probs=13.9
Q ss_pred eeEEeeccCCCCcccc
Q 004378 104 SSIFAYGQTSSGKTYT 119 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyT 119 (758)
.+|+-.|..|||||+.
T Consensus 7 ~~I~l~G~~GsGKTTi 22 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAI 22 (183)
T ss_dssp EEEEEECSTTSSHHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 5688889999999976
No 63
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=49.25 E-value=3.9 Score=45.53 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=26.5
Q ss_pred HHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 85 QVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 85 eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
.||.- +......++ .|.|-||+.-|.+|||||.++
T Consensus 107 Hifai-A~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~ 142 (712)
T d1d0xa2 107 HIFAI-SDVAYRSMLDDRQNQSLLITGESGAGKTENT 142 (712)
T ss_dssp CHHHH-HHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred cHHHH-HHHHHHHHHHhCCCceEEEeCCCCCCHHHHH
Confidence 47754 444444444 699999999999999999985
No 64
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=48.37 E-value=3.9 Score=37.75 Aligned_cols=30 Identities=30% Similarity=0.318 Sum_probs=24.3
Q ss_pred hHHHHHHhhcC---CCeeEEeeccCCCCccccc
Q 004378 91 AKEIALSVVSG---INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 91 v~plV~~vl~G---~N~tIfAYGqTGSGKTyTM 120 (758)
+-+-++.++.| ....++-||.+|+|||.-+
T Consensus 11 G~~~LD~~l~GGi~~gsl~li~G~pGsGKT~l~ 43 (242)
T d1tf7a2 11 GVVRLDEMCGGGFFKDSIILATGATGTGKTLLV 43 (242)
T ss_dssp SCHHHHHHTTSSEESSCEEEEEECTTSSHHHHH
T ss_pred CcHHHHHhhcCCCcCCeEEEEEeCCCCCHHHHH
Confidence 34557888886 6778999999999999876
No 65
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=48.36 E-value=2.3 Score=36.68 Aligned_cols=16 Identities=31% Similarity=0.412 Sum_probs=13.4
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+-+|..|||||+..
T Consensus 5 iI~l~G~~GsGKsTva 20 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIV 20 (178)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4777899999999764
No 66
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=47.59 E-value=3.9 Score=45.99 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=27.0
Q ss_pred hHHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 84 TQVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 84 ~eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
-.||.- +......++ .|.|-||+.-|.+|||||.++
T Consensus 102 PHiyav-A~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~ 138 (789)
T d1kk8a2 102 PHLFSV-ADNAYQNMVTDRENQSCLITGESGAGKTENT 138 (789)
T ss_dssp CCHHHH-HHHHHHHHHHHTSEEEEEEECSTTSSHHHHH
T ss_pred CcHHHH-HHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH
Confidence 347754 444444444 799999999999999999985
No 67
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=46.69 E-value=4.3 Score=45.66 Aligned_cols=36 Identities=19% Similarity=0.308 Sum_probs=27.7
Q ss_pred hHHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 84 TQVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 84 ~eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
-.||.- +......++ .|.|-||+.-|.+|||||.+.
T Consensus 104 PHifai-A~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~ 140 (794)
T d2mysa2 104 PHIFSI-SDNAYQFMLTDRENQSILITGESGAGKTVNT 140 (794)
T ss_dssp SCHHHH-HHHHHHHHHHHTCCEEEEEEECTTSCHHHHH
T ss_pred CcHHHH-HHHHHHHHHHcCCCcEEEEEcCCCCCHHHHH
Confidence 457754 444444444 799999999999999999885
No 68
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=46.68 E-value=4 Score=36.93 Aligned_cols=31 Identities=32% Similarity=0.201 Sum_probs=24.7
Q ss_pred hHHHHHHhhcC---CCeeEEeeccCCCCcccccC
Q 004378 91 AKEIALSVVSG---INSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 91 v~plV~~vl~G---~N~tIfAYGqTGSGKTyTM~ 121 (758)
+-|-++.++.| ....+..+|.+|+|||..+.
T Consensus 19 G~~~LD~ll~GGl~~G~l~~i~G~~G~GKT~~~l 52 (258)
T d2i1qa2 19 SSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMH 52 (258)
T ss_dssp SCHHHHHHTTSSEETTEEEEEEESTTSSHHHHHH
T ss_pred CCHHHHHhcCCCccCCeEEEEEeCCCCCHHHHHH
Confidence 44668888887 35678889999999998763
No 69
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=45.44 E-value=4.8 Score=44.77 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=26.9
Q ss_pred HHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 85 QVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 85 eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
.||.- +......++ .|.|-||+.-|.+|||||.++
T Consensus 76 Hif~v-A~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~ 111 (730)
T d1w7ja2 76 HIFAV-AEEAYKQMARDERNQSIIVSGESGAGKTVSA 111 (730)
T ss_dssp CHHHH-HHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred cHHHH-HHHHHHHHHHhCCCeEEEEEeCCCCCHHHHH
Confidence 37754 444444544 599999999999999999985
No 70
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=44.78 E-value=4.1 Score=34.48 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=13.5
Q ss_pred cCCCeeEEeeccCCCCcccc
Q 004378 100 SGINSSIFAYGQTSSGKTYT 119 (758)
Q Consensus 100 ~G~N~tIfAYGqTGSGKTyT 119 (758)
++|... +..++||||||+.
T Consensus 6 ~~~~~~-ll~apTGsGKT~~ 24 (136)
T d1a1va1 6 QSFQVA-HLHAPTGSGKSTK 24 (136)
T ss_dssp SSCEEE-EEECCTTSCTTTH
T ss_pred cCCCEE-EEEeCCCCCHHHH
Confidence 455444 4568999999964
No 71
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.37 E-value=5.2 Score=34.83 Aligned_cols=29 Identities=21% Similarity=0.193 Sum_probs=21.5
Q ss_pred HHHHHHhhcCC---CeeEEeeccCCCCccccc
Q 004378 92 KEIALSVVSGI---NSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 92 ~plV~~vl~G~---N~tIfAYGqTGSGKTyTM 120 (758)
-+-++.++.|- ...+.-+|.+|||||.-+
T Consensus 9 ~~~LD~ll~GGi~~G~v~~i~G~~GsGKT~l~ 40 (242)
T d1n0wa_ 9 SKELDKLLQGGIETGSITEMFGEFRTGKTQIC 40 (242)
T ss_dssp CHHHHHHTTTSEETTSEEEEECCTTSSHHHHH
T ss_pred CHHHHHhhcCCCcCCEEEEEEeCCCCCHHHHH
Confidence 34567777743 557888999999999654
No 72
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=43.71 E-value=5.3 Score=44.29 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=26.9
Q ss_pred HHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 85 QVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 85 eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
.||.- +......++ .+.|-||+.-|.+|||||.+.
T Consensus 73 Hif~v-A~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~ 108 (710)
T d1br2a2 73 HIYAI-ADTAYRSMLQDREDQSILCTGESGAGKTENT 108 (710)
T ss_dssp CHHHH-HHHHHHHHHHHTCCEEEEEECSTTSSHHHHH
T ss_pred hHHHH-HHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH
Confidence 46653 444444444 699999999999999999985
No 73
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.70 E-value=4.7 Score=36.26 Aligned_cols=30 Identities=23% Similarity=0.391 Sum_probs=21.5
Q ss_pred eeEEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 104 SSIFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
..|+-.|+.|||||+.- +|+.--...++|+
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~gdl~R 44 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLR 44 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEehhHHHH
Confidence 35788899999998875 4655555556664
No 74
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=43.50 E-value=3.2 Score=34.97 Aligned_cols=15 Identities=33% Similarity=0.474 Sum_probs=12.2
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+-.|..|||||+.-
T Consensus 5 I~l~G~~GsGKSTva 19 (169)
T d1kaga_ 5 IFLVGPMGAGKSTIG 19 (169)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 666799999999653
No 75
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=43.49 E-value=4.8 Score=37.79 Aligned_cols=18 Identities=22% Similarity=0.263 Sum_probs=15.0
Q ss_pred CeeEEeeccCCCCccccc
Q 004378 103 NSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 103 N~tIfAYGqTGSGKTyTM 120 (758)
.-.++-||+.|+|||.+.
T Consensus 34 ~~~~Ll~Gp~G~GKtt~a 51 (239)
T d1njfa_ 34 HHAYLFSGTRGVGKTSIA 51 (239)
T ss_dssp CSEEEEECSTTSSHHHHH
T ss_pred CeeEEEECCCCCcHHHHH
Confidence 345899999999999863
No 76
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.44 E-value=56 Score=25.22 Aligned_cols=64 Identities=28% Similarity=0.329 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 004378 363 KHLQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMV 427 (758)
Q Consensus 363 ~~Lq~Ei~~L~~eL~~~~~~~~~~~~~~~l~~~~~~i~~le~ei~el~~q~~~~q~~~~~l~~~~ 427 (758)
..+...+..|+..+-..... ...+....|...-..|..|+.++.++..+.+.++.+.+.|.+.+
T Consensus 14 ~~in~~f~~L~~llP~~~~~-~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 14 AHLRLSLEKLKGLVPLGPDS-SRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHSSCCCSSS-CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555566666666322111 11234556777777788888888888888888888887777655
No 77
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=42.85 E-value=3.3 Score=35.86 Aligned_cols=16 Identities=31% Similarity=0.434 Sum_probs=13.1
Q ss_pred eeEEeeccCCCCcccc
Q 004378 104 SSIFAYGQTSSGKTYT 119 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyT 119 (758)
.-|+-.|+.|||||+.
T Consensus 6 ~~I~i~G~~GsGKTT~ 21 (174)
T d1y63a_ 6 INILITGTPGTGKTSM 21 (174)
T ss_dssp CEEEEECSTTSSHHHH
T ss_pred CEEEEEeCCCCCHHHH
Confidence 3467789999999985
No 78
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=42.63 E-value=5.7 Score=43.85 Aligned_cols=35 Identities=26% Similarity=0.318 Sum_probs=26.6
Q ss_pred HHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 85 QVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 85 eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
.||.- +.....+++ .+.|-||+.-|.+|||||.+.
T Consensus 68 Hif~i-A~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~ 103 (684)
T d1lkxa_ 68 HMYAL-ANDAYRSMRQSQENQCVIISGESGAGKTEAS 103 (684)
T ss_dssp CHHHH-HHHHHHHHHHHCCCEEEEEECSTTSSHHHHH
T ss_pred hHHHH-HHHHHHHHHHcCCCeEEEEEcCCCCCHHHHH
Confidence 47754 444444444 689999999999999999985
No 79
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=41.45 E-value=4.1 Score=40.15 Aligned_cols=42 Identities=19% Similarity=0.507 Sum_probs=26.2
Q ss_pred ccccCeecCCCCChhHHHhhhhHHHHHHhh-cCCCeeEEeeccCCCCccccc
Q 004378 70 AYTFDRVFWGDCSTTQVYEDGAKEIALSVV-SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 70 ~F~FD~VF~~~asQ~eVy~~~v~plV~~vl-~G~N~tIfAYGqTGSGKTyTM 120 (758)
.|.|..|++. +.+ .+.++-.++ .|. .-|+-+|..|+|||...
T Consensus 3 ~~~f~~I~Gq----~~~----kral~laa~~~~~-h~vLl~G~pG~GKT~la 45 (333)
T d1g8pa_ 3 VFPFSAIVGQ----EDM----KLALLLTAVDPGI-GGVLVFGDRGTGKSTAV 45 (333)
T ss_dssp CCCGGGSCSC----HHH----HHHHHHHHHCGGG-CCEEEECCGGGCTTHHH
T ss_pred CCChhhccCc----HHH----HHHHHHHHhccCC-CeEEEECCCCccHHHHH
Confidence 4677777764 332 223333444 232 35789999999999875
No 80
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=41.09 E-value=3.7 Score=35.48 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=13.1
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+-.|..|||||+.-
T Consensus 8 iivl~G~~GsGKsT~a 23 (171)
T d1knqa_ 8 IYVLMGVSGSGKSAVA 23 (171)
T ss_dssp EEEEECSTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3566899999999874
No 81
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=40.85 E-value=3.6 Score=35.38 Aligned_cols=15 Identities=33% Similarity=0.326 Sum_probs=12.5
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+-.|+.|||||+..
T Consensus 7 I~i~G~pGsGKTTia 21 (173)
T d1rkba_ 7 ILLTGTPGVGKTTLG 21 (173)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 566799999999864
No 82
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=40.67 E-value=5.5 Score=35.81 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=24.1
Q ss_pred eeEEeeccCCCCccccc------CCCCcchHHHHHHHH
Q 004378 104 SSIFAYGQTSSGKTYTM------TGITECTVADIFDYI 135 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM------~Gii~rav~dLF~~i 135 (758)
-.|+-.|+.|||||+.. +|+......+++...
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~is~g~llr~~ 46 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAE 46 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEEEHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeeEeccHHHHHH
Confidence 35788999999999765 577766777766643
No 83
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=40.25 E-value=3.5 Score=35.98 Aligned_cols=15 Identities=33% Similarity=0.463 Sum_probs=13.1
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+--|++|+|||+.+
T Consensus 3 i~I~G~~G~GKSTLl 17 (178)
T d1ye8a1 3 IIITGEPGVGKTTLV 17 (178)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCcHHHHHH
Confidence 677899999999975
No 84
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.24 E-value=4 Score=36.72 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=14.0
Q ss_pred eeEEeeccCCCCcccc
Q 004378 104 SSIFAYGQTSSGKTYT 119 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyT 119 (758)
..|+..|..|||||+-
T Consensus 15 ~liil~G~pGsGKST~ 30 (172)
T d1yj5a2 15 EVVVAVGFPGAGKSTF 30 (172)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred EEEEEECCCCCCHHHH
Confidence 4688999999999974
No 85
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.69 E-value=50 Score=26.10 Aligned_cols=42 Identities=26% Similarity=0.342 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 004378 387 DYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVG 428 (758)
Q Consensus 387 ~~~~~l~~~~~~i~~le~ei~el~~q~~~~q~~~~~l~~~~~ 428 (758)
+....|..--..|+.|++++.++..+.+.++.+++.|.+.+.
T Consensus 42 sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~ 83 (88)
T d1nkpa_ 42 PKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLE 83 (88)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666677777777777777777777777766666553
No 86
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=39.25 E-value=4.4 Score=35.00 Aligned_cols=18 Identities=22% Similarity=0.304 Sum_probs=14.6
Q ss_pred CeeEEeeccCCCCccccc
Q 004378 103 NSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 103 N~tIfAYGqTGSGKTyTM 120 (758)
|-.|+-.|..|||||+..
T Consensus 1 ~kiI~i~G~~GsGKsT~~ 18 (190)
T d1khta_ 1 NKVVVVTGVPGVGSTTSS 18 (190)
T ss_dssp CCEEEEECCTTSCHHHHH
T ss_pred CCEEEEECCCCCCHHHHH
Confidence 345788899999999873
No 87
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=38.93 E-value=4.5 Score=36.22 Aligned_cols=29 Identities=24% Similarity=0.417 Sum_probs=19.7
Q ss_pred eEEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 105 SIFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
.|+-+|+.|||||+.. .|+......+++.
T Consensus 8 iI~i~G~pGSGKsT~a~~La~~~g~~~i~~g~~~r 42 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLR 42 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCEEEEHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEchhhHHH
Confidence 5788999999999854 3544444444443
No 88
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=38.17 E-value=8.9 Score=37.99 Aligned_cols=16 Identities=38% Similarity=0.393 Sum_probs=13.8
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
+++-+|+||+|||++.
T Consensus 55 ~~lf~Gp~G~GKt~la 70 (315)
T d1qvra3 55 SFLFLGPTGVGKTELA 70 (315)
T ss_dssp EEEEBSCSSSSHHHHH
T ss_pred EEEEECCCcchHHHHH
Confidence 5777799999999985
No 89
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=38.04 E-value=4.1 Score=35.18 Aligned_cols=16 Identities=25% Similarity=0.387 Sum_probs=13.3
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+-.|.+|||||+..
T Consensus 6 iI~l~G~~GsGKSTia 21 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTIA 21 (176)
T ss_dssp EEEEEECTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778899999999863
No 90
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=37.94 E-value=5.2 Score=35.74 Aligned_cols=15 Identities=27% Similarity=0.394 Sum_probs=13.2
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+-.|+.|||||+..
T Consensus 6 I~i~GppGsGKsT~a 20 (189)
T d1zaka1 6 VMISGAPASGKGTQC 20 (189)
T ss_dssp EEEEESTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 778899999999865
No 91
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=36.85 E-value=8.8 Score=35.31 Aligned_cols=28 Identities=11% Similarity=0.159 Sum_probs=20.9
Q ss_pred HHHHhhcCC-CeeEEeeccCCCCcccccC
Q 004378 94 IALSVVSGI-NSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 94 lV~~vl~G~-N~tIfAYGqTGSGKTyTM~ 121 (758)
++..+-.|. .-+++-||+.|+|||.+..
T Consensus 14 l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~ 42 (207)
T d1a5ta2 14 LVASYQAGRGHHALLIQALPGMGDDALIY 42 (207)
T ss_dssp HHHHHHTTCCCSEEEEECCTTSCHHHHHH
T ss_pred HHHHHHcCCcCeEEEEECCCCCcHHHHHH
Confidence 455555555 6678889999999998753
No 92
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=36.64 E-value=5.6 Score=35.51 Aligned_cols=32 Identities=16% Similarity=0.336 Sum_probs=21.9
Q ss_pred CCCeeEEeeccCCCCccccc------CCCCcchHHHHHHH
Q 004378 101 GINSSIFAYGQTSSGKTYTM------TGITECTVADIFDY 134 (758)
Q Consensus 101 G~N~tIfAYGqTGSGKTyTM------~Gii~rav~dLF~~ 134 (758)
|...+| .|+.|||||+.- +|+..-.+.+++..
T Consensus 3 ~~riil--~G~pGSGKsT~a~~La~~~g~~~i~~gdllr~ 40 (190)
T d1ak2a1 3 GVRAVL--LGPPGAGKGTQAPKLAKNFCVCHLATGDMLRA 40 (190)
T ss_dssp CCEEEE--ECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHH
T ss_pred ccEEEE--ECCCCCCHHHHHHHHHHHhCCeEEeHHHHHHH
Confidence 444443 699999999876 46666566666653
No 93
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=36.34 E-value=5.3 Score=37.96 Aligned_cols=19 Identities=16% Similarity=-0.020 Sum_probs=13.4
Q ss_pred cCCCeeEEeeccCCCCccccc
Q 004378 100 SGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 100 ~G~N~tIfAYGqTGSGKTyTM 120 (758)
.|.+ ++.-++||||||+.+
T Consensus 8 ~~~~--~lv~~~TGsGKT~~~ 26 (305)
T d2bmfa2 8 KKRL--TIMDLHPGAGKTKRY 26 (305)
T ss_dssp TTCE--EEECCCTTSSTTTTH
T ss_pred cCCc--EEEEECCCCCHHHHH
Confidence 3444 345589999999764
No 94
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=35.52 E-value=7.2 Score=34.99 Aligned_cols=26 Identities=27% Similarity=0.313 Sum_probs=19.3
Q ss_pred HHHHhhcC---CCeeEEeeccCCCCcccc
Q 004378 94 IALSVVSG---INSSIFAYGQTSSGKTYT 119 (758)
Q Consensus 94 lV~~vl~G---~N~tIfAYGqTGSGKTyT 119 (758)
-++.++.| ....+.-||.+|+|||..
T Consensus 14 ~LD~~l~GGi~~G~~~~I~G~~G~GKT~l 42 (242)
T d1tf7a1 14 GFDDISHGGLPIGRSTLVSGTSGTGKTLF 42 (242)
T ss_dssp THHHHTTSSEETTSEEEEEESTTSSHHHH
T ss_pred HHHHhhcCCCcCCeEEEEEeCCCCCHHHH
Confidence 35666763 455678889999999965
No 95
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=35.30 E-value=4.9 Score=40.81 Aligned_cols=25 Identities=24% Similarity=0.254 Sum_probs=16.9
Q ss_pred HHHhhcCCCeeEEeeccCCCCcccccC
Q 004378 95 ALSVVSGINSSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 95 V~~vl~G~N~tIfAYGqTGSGKTyTM~ 121 (758)
|..++.+ ...+-.|..|||||||+.
T Consensus 157 ~~~al~~--~~~vI~G~pGTGKTt~i~ 181 (359)
T d1w36d1 157 AAVALTR--RISVISGGPGTGKTTTVA 181 (359)
T ss_dssp HHHHHTB--SEEEEECCTTSTHHHHHH
T ss_pred HHHHHcC--CeEEEEcCCCCCceehHH
Confidence 3344532 345556999999999974
No 96
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=35.12 E-value=8.2 Score=39.17 Aligned_cols=17 Identities=29% Similarity=0.210 Sum_probs=15.1
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
-+++-||+.|+|||+..
T Consensus 155 ~~~~~~g~~~~gk~~~~ 171 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLA 171 (362)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 48999999999999875
No 97
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=35.00 E-value=5.6 Score=35.42 Aligned_cols=17 Identities=35% Similarity=0.507 Sum_probs=14.5
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
..|+..|-+|||||+.-
T Consensus 3 ~li~l~GlpgsGKSTla 19 (213)
T d1bifa1 3 TLIVMVGLPARGKTYIS 19 (213)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 45888999999999874
No 98
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=34.83 E-value=9.9 Score=37.51 Aligned_cols=17 Identities=35% Similarity=0.362 Sum_probs=14.3
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
+.++-.|+||+|||+..
T Consensus 53 ~~~lf~Gp~GvGKT~la 69 (315)
T d1r6bx3 53 GSFLFAGPTGVGKTEVT 69 (315)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCcchhHHHH
Confidence 36777799999999986
No 99
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=34.51 E-value=6.7 Score=34.73 Aligned_cols=29 Identities=24% Similarity=0.376 Sum_probs=21.5
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFDY 134 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~~ 134 (758)
|+-.|+.|||||+.. +|+.-..+.+++..
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~g~~~is~gdllr~ 37 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRA 37 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceeeHHHHHHH
Confidence 667899999999865 46666666666653
No 100
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=34.23 E-value=6.5 Score=35.28 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=25.4
Q ss_pred eEEeeccCCCCccccc------CCCCcchHHHHHHHHH
Q 004378 105 SIFAYGQTSSGKTYTM------TGITECTVADIFDYIH 136 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM------~Gii~rav~dLF~~i~ 136 (758)
.|.-.|+.||||++.- +|+.....-+||+.+.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~iStGdLlR~~a 42 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA 42 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEEHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEECHHHHHHHHH
Confidence 3556799999999876 6888888888888654
No 101
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.22 E-value=5.2 Score=40.31 Aligned_cols=22 Identities=18% Similarity=0.385 Sum_probs=17.1
Q ss_pred CCCeeEEeeccCCCCcccccCC
Q 004378 101 GINSSIFAYGQTSSGKTYTMTG 122 (758)
Q Consensus 101 G~N~tIfAYGqTGSGKTyTM~G 122 (758)
-.++.++.-+.-||||||||.+
T Consensus 14 p~~g~~lv~A~AGsGKT~~l~~ 35 (485)
T d1w36b1 14 PLQGERLIEASAGTGKTFTIAA 35 (485)
T ss_dssp CCSSCEEEECCTTSCHHHHHHH
T ss_pred CCCCCeEEEEcCchHHHHHHHH
Confidence 4566677777889999999953
No 102
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=33.88 E-value=8.8 Score=35.24 Aligned_cols=25 Identities=28% Similarity=0.263 Sum_probs=17.7
Q ss_pred HHHhhcCCCeeEEeeccCCCCccccc
Q 004378 95 ALSVVSGINSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 95 V~~vl~G~N~tIfAYGqTGSGKTyTM 120 (758)
+..+++|.+ .+++-.+||||||+..
T Consensus 35 ip~~l~g~~-d~iv~a~TGsGKT~~~ 59 (208)
T d1hv8a1 35 IPLFLNDEY-NIVAQARTGSGKTASF 59 (208)
T ss_dssp HHHHHHTCS-EEEEECCSSSSHHHHH
T ss_pred HHHHHcCCC-Ceeeechhccccccee
Confidence 345567742 3567779999999865
No 103
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=33.43 E-value=5.3 Score=40.62 Aligned_cols=19 Identities=42% Similarity=0.504 Sum_probs=15.7
Q ss_pred CCeeEEeeccCCCCccccc
Q 004378 102 INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 102 ~N~tIfAYGqTGSGKTyTM 120 (758)
--+.|+..|+||+|||...
T Consensus 67 p~~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCCCEEEECCTTSSHHHHH
T ss_pred CCcceeeeCCCCccHHHHH
Confidence 4566888999999999863
No 104
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=32.42 E-value=4.8 Score=34.52 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=13.8
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
.|+-.|.+|||||+..
T Consensus 9 ~I~i~G~~GsGKTTla 24 (192)
T d1lw7a2 9 TVAILGGESSGKSVLV 24 (192)
T ss_dssp EEEEECCTTSHHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4778999999999875
No 105
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=31.42 E-value=8.6 Score=34.75 Aligned_cols=28 Identities=18% Similarity=0.233 Sum_probs=20.0
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
|+-.|+.|||||+.- +|+..-.+.+++.
T Consensus 9 IiliG~PGSGKtT~a~~La~~~g~~~is~gdllr 42 (189)
T d2ak3a1 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLR 42 (189)
T ss_dssp EEEECCTTSSHHHHHHHHHHHBCCEEEEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCeEEcHHHHHH
Confidence 556799999998865 4666556666664
No 106
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.16 E-value=7.1 Score=34.75 Aligned_cols=29 Identities=21% Similarity=0.426 Sum_probs=19.2
Q ss_pred eEEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 105 SIFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
-|+-.|+.|||||+.- +|+.--...++|.
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~g~~~i~~g~llR 37 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLR 37 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceEcHHHHHH
Confidence 3788999999998764 3544444444443
No 107
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=30.98 E-value=8.3 Score=33.97 Aligned_cols=28 Identities=21% Similarity=0.503 Sum_probs=20.6
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
|+-.|+.|||||+.- +|+..-.+.+++.
T Consensus 3 I~i~G~pGsGKsT~a~~La~~~g~~~i~~~~l~~ 36 (181)
T d2cdna1 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFR 36 (181)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTCCEEEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceEchHHHHH
Confidence 566799999999865 4766666666654
No 108
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=30.87 E-value=6.5 Score=34.31 Aligned_cols=17 Identities=18% Similarity=0.464 Sum_probs=15.1
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
+||...|.+|+|||..+
T Consensus 1 a~V~liG~~n~GKSsLi 17 (171)
T d1mkya1 1 ATVLIVGRPNVGKSTLF 17 (171)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 68999999999999864
No 109
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=30.81 E-value=10 Score=38.02 Aligned_cols=18 Identities=28% Similarity=0.383 Sum_probs=14.6
Q ss_pred eeEEeeccCCCCcccccC
Q 004378 104 SSIFAYGQTSSGKTYTMT 121 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM~ 121 (758)
+.++.||+.|+|||....
T Consensus 124 g~~l~~G~pG~GKT~la~ 141 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVH 141 (321)
T ss_dssp EEEEEECSSSSCHHHHHH
T ss_pred ceEEEECCCCccHHHHHH
Confidence 447779999999998763
No 110
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=30.45 E-value=10 Score=35.11 Aligned_cols=20 Identities=25% Similarity=0.330 Sum_probs=16.5
Q ss_pred cCCCeeEEeeccCCCCcccc
Q 004378 100 SGINSSIFAYGQTSSGKTYT 119 (758)
Q Consensus 100 ~G~N~tIfAYGqTGSGKTyT 119 (758)
.-...+|+-.|.+|||||+.
T Consensus 21 ~~kg~vIwltGlsGsGKTTi 40 (208)
T d1m7ga_ 21 NQRGLTIWLTGLSASGKSTL 40 (208)
T ss_dssp TSSCEEEEEECSTTSSHHHH
T ss_pred CCCCeEEEEECCCCCCHHHH
Confidence 34667899999999999954
No 111
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.04 E-value=13 Score=32.43 Aligned_cols=18 Identities=28% Similarity=0.152 Sum_probs=14.4
Q ss_pred CeeEEeeccCCCCccccc
Q 004378 103 NSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 103 N~tIfAYGqTGSGKTyTM 120 (758)
-..|.-.|.+|||||+..
T Consensus 22 ~~iIgI~G~~GSGKSTla 39 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTTLA 39 (198)
T ss_dssp SEEEEEEECTTSSHHHHH
T ss_pred CEEEEEECCCCCCHHHHH
Confidence 445778899999999863
No 112
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=29.77 E-value=16 Score=37.77 Aligned_cols=81 Identities=12% Similarity=0.226 Sum_probs=48.1
Q ss_pred ccccCeecCCCCChhHHHhhhhHHHHHHhhcCCCeeEEeeccCCCCcccccCCCCc-------------chHHHHHHHHH
Q 004378 70 AYTFDRVFWGDCSTTQVYEDGAKEIALSVVSGINSSIFAYGQTSSGKTYTMTGITE-------------CTVADIFDYIH 136 (758)
Q Consensus 70 ~F~FD~VF~~~asQ~eVy~~~v~plV~~vl~G~N~tIfAYGqTGSGKTyTM~Gii~-------------rav~dLF~~i~ 136 (758)
.|..-.=|-|.-+|-+-. +.+++.+-.|..-.+ .+|.|||||||+|..++. .....|++-+.
T Consensus 3 ~f~~~~~~~p~gDQP~aI----~~l~~~l~~g~~~q~-l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~ 77 (413)
T d1t5la1 3 RFQLVAPYEPQGDQPQAI----AKLVDGLRRGVKHQT-LLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELK 77 (413)
T ss_dssp CCCCCCSSCCCTTHHHHH----HHHHHHHHHTCSEEE-EEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHH
T ss_pred ceEEecCCCCCCCCHHHH----HHHHHHHhcCCCcEE-EeCCCCcHHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHH
Confidence 355555677888887654 446667777765433 559999999999965221 12345555554
Q ss_pred hc-cccceEEEeehhhhhhh
Q 004378 137 RH-EERAFVLKFSAMEIYNE 155 (758)
Q Consensus 137 ~~-~~~~~~V~vS~lEIYnE 155 (758)
.. ++..+....+++..|..
T Consensus 78 ~~l~~~~v~~f~~~~~~~~~ 97 (413)
T d1t5la1 78 EFFPHNAVEYFVSYYDYAQP 97 (413)
T ss_dssp HHCTTSEEEEECCGGGTCCC
T ss_pred HHcCCCceeeccchhhcccc
Confidence 32 23344455555555543
No 113
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=29.66 E-value=8.5 Score=37.28 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=24.4
Q ss_pred hhHHHHHHhhc-C---CCeeEEeeccCCCCccccc
Q 004378 90 GAKEIALSVVS-G---INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 90 ~v~plV~~vl~-G---~N~tIfAYGqTGSGKTyTM 120 (758)
++.+-++.+|. | ....+.-||++|||||+.+
T Consensus 37 TG~~~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~ 71 (263)
T d1u94a1 37 TGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLT 71 (263)
T ss_dssp CSCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHH
T ss_pred cCCHHHHHHhcCCCccCceEEEEecCCCcHHHHHH
Confidence 45567777885 4 4567889999999999986
No 114
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.93 E-value=9.2 Score=33.84 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=20.3
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFDY 134 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~~ 134 (758)
|+-.|+.|||||+.. +|+....+.+++..
T Consensus 5 Ivl~G~pGSGKtT~a~~La~~~g~~~i~~~d~~~~ 39 (180)
T d1akya1 5 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRS 39 (180)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCceEecccccee
Confidence 566699999999876 46655555555543
No 115
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=27.68 E-value=10 Score=32.98 Aligned_cols=28 Identities=25% Similarity=0.456 Sum_probs=20.0
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
|+-.|+.|||||+.. +|+.--...+++.
T Consensus 3 I~i~G~pGSGKsT~a~~La~~~~~~~i~~~~ll~ 36 (182)
T d1zina1 3 LVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFR 36 (182)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHCCCEEEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCceechhHHHH
Confidence 677999999999865 4655555555554
No 116
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=27.08 E-value=8.4 Score=33.79 Aligned_cols=16 Identities=31% Similarity=0.389 Sum_probs=12.8
Q ss_pred eEEeeccCCCCccccc
Q 004378 105 SIFAYGQTSSGKTYTM 120 (758)
Q Consensus 105 tIfAYGqTGSGKTyTM 120 (758)
+|+-.|..|||||+.-
T Consensus 4 ~Iil~G~~GsGKSTia 19 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVG 19 (170)
T ss_dssp CEEEESCTTSSHHHHH
T ss_pred CEEEECCCCCCHHHHH
Confidence 4666799999999864
No 117
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=27.03 E-value=9 Score=40.08 Aligned_cols=16 Identities=31% Similarity=0.465 Sum_probs=12.7
Q ss_pred EEeeccCCCCcccccC
Q 004378 106 IFAYGQTSSGKTYTMT 121 (758)
Q Consensus 106 IfAYGqTGSGKTyTM~ 121 (758)
++.-|..|||||+||.
T Consensus 27 ~lV~A~AGSGKT~~lv 42 (623)
T g1qhh.1 27 LLIMAGAGSGKTRVLT 42 (623)
T ss_dssp EEEEECTTSCHHHHHH
T ss_pred EEEEEeCchHHHHHHH
Confidence 4444789999999994
No 118
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=26.66 E-value=82 Score=24.00 Aligned_cols=27 Identities=22% Similarity=0.314 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 004378 401 KMEREIRELTKQRDLAQSRVEDLLRMV 427 (758)
Q Consensus 401 ~le~ei~el~~q~~~~q~~~~~l~~~~ 427 (758)
+-..++.+|..|++..+.|+.+....+
T Consensus 34 K~~nk~~el~~Q~~s~~~ki~Ea~~li 60 (65)
T d1lrza1 34 KAHNKRDNLQQQLDANEQKIEEGKRLQ 60 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666777777776666554443
No 119
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=25.83 E-value=11 Score=33.00 Aligned_cols=28 Identities=25% Similarity=0.439 Sum_probs=18.1
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFD 133 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~ 133 (758)
|+-.|+.|||||+.. +|+.--.+.+++.
T Consensus 3 I~i~G~pGSGKsT~~~~La~~~~~~~i~~~~llr 36 (179)
T d1e4va1 3 IILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLR 36 (179)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHCCCEEEHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCceechhhHhH
Confidence 456799999999864 3444444445544
No 120
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.72 E-value=8.6 Score=34.51 Aligned_cols=15 Identities=27% Similarity=0.492 Sum_probs=12.6
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+-.|++|||||..+
T Consensus 4 Ivl~GpsG~GK~tl~ 18 (186)
T d1gkya_ 4 IVISGPSGTGKSTLL 18 (186)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 678899999998753
No 121
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=25.16 E-value=9.5 Score=33.33 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.4
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+-.|..|||||..-
T Consensus 3 I~liG~~GsGKsTi~ 17 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLA 17 (161)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 566699999999764
No 122
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=25.12 E-value=11 Score=35.86 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=12.5
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
+.-.|++|||||+.|
T Consensus 34 ~~iiG~sGsGKSTLl 48 (230)
T d1l2ta_ 34 VSIMGPSGSGKSTML 48 (230)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCcchhh
Confidence 456799999999776
No 123
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.91 E-value=1.3e+02 Score=22.08 Aligned_cols=53 Identities=11% Similarity=0.121 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004378 365 LQKELARLESELRSPAPASSTCDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRV 420 (758)
Q Consensus 365 Lq~Ei~~L~~eL~~~~~~~~~~~~~~~l~~~~~~i~~le~ei~el~~q~~~~q~~~ 420 (758)
+...+..|+..+-...... +....|.+--.-|+.|++++.+|..+...++...
T Consensus 4 in~~f~~L~~lvP~~~~K~---~Ka~iL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 4 INDKIIELKDLVMGTDAKM---HKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp HHHHHHHHHHHHSCSSCCC---CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCcc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677887775332221 2334555556677777777777777776665554
No 124
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=23.86 E-value=9.5 Score=32.89 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=12.0
Q ss_pred EEeeccCCCCccccc
Q 004378 106 IFAYGQTSSGKTYTM 120 (758)
Q Consensus 106 IfAYGqTGSGKTyTM 120 (758)
|+-.|..|||||+..
T Consensus 4 ivi~G~~GsGKTT~~ 18 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL 18 (194)
T ss_dssp EEEEECTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 445699999999774
No 125
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=23.32 E-value=9.1 Score=37.17 Aligned_cols=27 Identities=11% Similarity=0.062 Sum_probs=17.6
Q ss_pred HHHHhhcCCCeeEEeeccCCCCcccccCC
Q 004378 94 IALSVVSGINSSIFAYGQTSSGKTYTMTG 122 (758)
Q Consensus 94 lV~~vl~G~N~tIfAYGqTGSGKTyTM~G 122 (758)
.|..++...++.|.+ +||+|||.++..
T Consensus 121 av~~~l~~~~~il~~--pTGsGKT~i~~~ 147 (282)
T d1rifa_ 121 AVFEGLVNRRRILNL--PTSAGRSLIQAL 147 (282)
T ss_dssp HHHHHHHHSEEEECC--CTTSCHHHHHHH
T ss_pred HHHHHHhcCCceeEE--EcccCccHHHHH
Confidence 444555555554444 899999987543
No 126
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.77 E-value=14 Score=33.42 Aligned_cols=30 Identities=20% Similarity=0.197 Sum_probs=21.5
Q ss_pred hHHHHHHhhcC---CCeeEEeeccCCCCccccc
Q 004378 91 AKEIALSVVSG---INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 91 v~plV~~vl~G---~N~tIfAYGqTGSGKTyTM 120 (758)
+-+-++.+|.| ....++-+|++|+|||.-.
T Consensus 22 Gi~~LD~~lgGGip~G~~~~i~G~~GsGKT~la 54 (258)
T d1v5wa_ 22 GSQEFDKLLGGGIESMAITEAFGEFRTGKTQLS 54 (258)
T ss_dssp SCHHHHHHTTSSBCSSEEEEEECCTTCTHHHHH
T ss_pred CCHHHHHhhcCCCcCCEEEEEECCCCCCHHHHH
Confidence 44556666653 2447889999999999863
No 127
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=22.58 E-value=13 Score=36.00 Aligned_cols=31 Identities=23% Similarity=0.134 Sum_probs=24.3
Q ss_pred hhHHHHHHhhc-C---CCeeEEeeccCCCCccccc
Q 004378 90 GAKEIALSVVS-G---INSSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 90 ~v~plV~~vl~-G---~N~tIfAYGqTGSGKTyTM 120 (758)
++.+.++.+|. | .+...--||+.|||||+.+
T Consensus 40 TGs~~lD~~Lg~GGip~g~itei~G~~~sGKT~l~ 74 (268)
T d1xp8a1 40 TGSLSLDLALGVGGIPRGRITEIYGPESGGKTTLA 74 (268)
T ss_dssp CSCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHH
T ss_pred CCCHHHHHHhcCCCccCceEEEEecCCccchHHHH
Confidence 45667778885 5 4557889999999999976
No 128
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.51 E-value=85 Score=31.41 Aligned_cols=140 Identities=12% Similarity=0.109 Sum_probs=74.6
Q ss_pred HHHHHHHHHHhccCCCCcccCCCCcccccccccCCCCcceeEEe-------ecCCCcccHHHHHHHHHHHHHhhcccccc
Q 004378 278 LLTLSTVIRKLSKGRNGHINYRDSKLTRMLQPCLGGNARTAIIC-------TLSPARSHVEQTRNTLLFACCAKEVTTKA 350 (758)
Q Consensus 278 L~aLg~VI~aLs~~~~~hIPYRdSKLTrLLqdsLGGNskT~mIa-------tISPs~~~~eETlsTLrFA~rAk~Ikn~~ 350 (758)
++++||.++. |..+-.-|+=+-|++|.. .=+...++.++- ...|...++.+-+..+.-|++.
T Consensus 223 iL~~GN~lN~---g~~~A~GFkL~sL~kL~d-~Ks~d~~~tLL~yiv~~~~~~~p~l~~~~~el~~v~~a~~~------- 291 (411)
T d1ux5a_ 223 ILAVGNFMND---TSKQAQGFKLSTLQRLTF-IKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKV------- 291 (411)
T ss_dssp HHHHHHHHSC---GGGCCSCCCGGGGGGSSS-CBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTC-------
T ss_pred HHHHhhhhcC---CCCCcceeehHHHHHhhh-ccCCCCCeeHHHHHHHHHHHhCcHhhccHHHHHHHHHHhcC-------
Confidence 4555665553 222233566666776642 222223333322 2334444444444444444322
Q ss_pred eeccccCHHHHHHHHHHHHHHHHHHhcCCCCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 004378 351 QVNVVMSDKALVKHLQKELARLESELRSPAPASST--CDYVALLRKKDLQIQKMEREIRELTKQRDLAQSRVEDLLRMVG 428 (758)
Q Consensus 351 ~vN~~~s~~~li~~Lq~Ei~~L~~eL~~~~~~~~~--~~~~~~l~~~~~~i~~le~ei~el~~q~~~~q~~~~~l~~~~~ 428 (758)
+.. .....++.|.+.+..++.++......... ............-+...+.++..+......+.....++...+|
T Consensus 292 --~~~-~l~~~~~~L~~~l~~i~~~~~~~~~~~~~~~~~~d~f~~~~~~fl~~~~~~~~~l~~~~~~~~~~~~~~~~yfG 368 (411)
T d1ux5a_ 292 --SIE-QLVNDCKDFSQSIVNVERSVEIGNLSDSSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYG 368 (411)
T ss_dssp --CHH-HHHHHHHHHHHHHHHHHHHHHHSTTTCTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred --CHH-HHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 111 12345677888888888877532221100 0001112222334566778888888888888899999999999
Q ss_pred cCC
Q 004378 429 CDQ 431 (758)
Q Consensus 429 ~~~ 431 (758)
++.
T Consensus 369 Ed~ 371 (411)
T d1ux5a_ 369 EDS 371 (411)
T ss_dssp CCS
T ss_pred CCC
Confidence 874
No 129
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=22.32 E-value=11 Score=35.89 Aligned_cols=17 Identities=29% Similarity=0.495 Sum_probs=14.5
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
-+|+..|.||+|||.++
T Consensus 33 l~I~LvG~tg~GKSSli 49 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTV 49 (257)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred cEEEEECCCCCcHHHHH
Confidence 46888999999999864
No 130
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=22.19 E-value=11 Score=32.74 Aligned_cols=17 Identities=24% Similarity=0.456 Sum_probs=14.6
Q ss_pred eeEEeeccCCCCccccc
Q 004378 104 SSIFAYGQTSSGKTYTM 120 (758)
Q Consensus 104 ~tIfAYGqTGSGKTyTM 120 (758)
++|.-.|.+|+|||..+
T Consensus 1 a~I~lvG~~nvGKSsLi 17 (184)
T d2cxxa1 1 ATIIFAGRSNVGKSTLI 17 (184)
T ss_dssp CEEEEEEBTTSSHHHHH
T ss_pred CEEEEECCCCCCHHHHH
Confidence 58899999999999753
No 131
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.03 E-value=11 Score=33.93 Aligned_cols=14 Identities=21% Similarity=0.420 Sum_probs=12.1
Q ss_pred EEeeccCCCCcccc
Q 004378 106 IFAYGQTSSGKTYT 119 (758)
Q Consensus 106 IfAYGqTGSGKTyT 119 (758)
|.-.|++|||||.-
T Consensus 3 Ivl~GPsGsGK~tl 16 (190)
T d1lvga_ 3 VVLSGPSGAGKSTL 16 (190)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 66789999999874
No 132
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=21.91 E-value=14 Score=35.17 Aligned_cols=20 Identities=30% Similarity=0.559 Sum_probs=15.2
Q ss_pred EEeeccCCCCccccc---CCCCc
Q 004378 106 IFAYGQTSSGKTYTM---TGITE 125 (758)
Q Consensus 106 IfAYGqTGSGKTyTM---~Gii~ 125 (758)
+--.|+.|+|||++| .|+.+
T Consensus 35 ~~liGpnGaGKSTl~~~i~Gl~~ 57 (240)
T d1ji0a_ 35 VTLIGANGAGKTTTLSAIAGLVR 57 (240)
T ss_dssp EEEECSTTSSHHHHHHHHTTSSC
T ss_pred EEEECCCCCcHHHHHHHHhCCCC
Confidence 344699999999998 56553
No 133
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=21.73 E-value=15 Score=32.98 Aligned_cols=31 Identities=26% Similarity=0.282 Sum_probs=23.0
Q ss_pred EEeeccCCCCccccc------CCCCcchHHHHHHHHH
Q 004378 106 IFAYGQTSSGKTYTM------TGITECTVADIFDYIH 136 (758)
Q Consensus 106 IfAYGqTGSGKTyTM------~Gii~rav~dLF~~i~ 136 (758)
|.--|+.|||||+.- +|+.....-+||+.+.
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~istGdl~R~~a 42 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAAT 42 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEEEHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEECHHHHHHHHH
Confidence 444599999999877 5777667777777654
No 134
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=21.65 E-value=14 Score=35.44 Aligned_cols=19 Identities=16% Similarity=0.218 Sum_probs=14.4
Q ss_pred EEeeccCCCCccccc---CCCC
Q 004378 106 IFAYGQTSSGKTYTM---TGIT 124 (758)
Q Consensus 106 IfAYGqTGSGKTyTM---~Gii 124 (758)
+--.|++|||||+.| .|+.
T Consensus 34 ~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 34 YGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp EEEEESTTSSHHHHHHHHTTSS
T ss_pred EEEECCCCCCHHHHHHHHcCCc
Confidence 345699999999876 4654
No 135
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.63 E-value=51 Score=32.15 Aligned_cols=96 Identities=11% Similarity=0.119 Sum_probs=60.7
Q ss_pred cCCCcccHHHHHHHHHHHHHhhcccccceeccccCHHHHHHHHHHHHHHHHHHhcCCCCCCCch-hHHHHHHHHHHHHHH
Q 004378 323 LSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKHLQKELARLESELRSPAPASSTC-DYVALLRKKDLQIQK 401 (758)
Q Consensus 323 ISPs~~~~eETlsTLrFA~rAk~Ikn~~~vN~~~s~~~li~~Lq~Ei~~L~~eL~~~~~~~~~~-~~~~~l~~~~~~i~~ 401 (758)
-.|...++.+.+..+.-|++. +. ......+..|.+.+..++.++.......... .+.. ....=+..
T Consensus 185 ~~p~l~~~~~eL~~v~~ask~---------~~-~~l~~~~~~l~~~l~~~~~~l~~~~~~~~~~d~f~~---~~~~Fl~~ 251 (332)
T d1v9da_ 185 DHPEVLKFPDELAHVEKASRV---------SA-ENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVE---KMTSFVKD 251 (332)
T ss_dssp SCCTTSSGGGGCTTHHHHHHC---------CH-HHHHHHHHHHHHHHHHHHHHHHTCCCCSSSSCCHHH---HHHHHHHH
T ss_pred hCchhccchhhhhhHHHHhcC---------CH-HHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHH---HHHHHHHH
Confidence 456555666666666555542 11 0123457788888888888887544332111 1211 22223566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 004378 402 MEREIRELTKQRDLAQSRVEDLLRMVGCDQ 431 (758)
Q Consensus 402 le~ei~el~~q~~~~q~~~~~l~~~~~~~~ 431 (758)
.+.++..+......+.....++...+|++.
T Consensus 252 a~~~l~~l~~~~~~~~~~~~~~~~yfgEd~ 281 (332)
T d1v9da_ 252 AQEQYNKLRMMHSNMETLYKELGDYFVFDP 281 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 778888888888888899999999999874
No 136
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=21.44 E-value=14 Score=35.14 Aligned_cols=19 Identities=26% Similarity=0.260 Sum_probs=14.6
Q ss_pred EEeeccCCCCccccc---CCCC
Q 004378 106 IFAYGQTSSGKTYTM---TGIT 124 (758)
Q Consensus 106 IfAYGqTGSGKTyTM---~Gii 124 (758)
|--.|++|||||+.+ .|+.
T Consensus 32 vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 32 IGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp EEEECSTTSSHHHHHHHHTTSS
T ss_pred EEEECCCCCCHHHHHHHHHhcC
Confidence 456799999999876 4644
No 137
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.22 E-value=13 Score=35.61 Aligned_cols=17 Identities=35% Similarity=0.612 Sum_probs=13.4
Q ss_pred eeccCCCCccccc---CCCC
Q 004378 108 AYGQTSSGKTYTM---TGIT 124 (758)
Q Consensus 108 AYGqTGSGKTyTM---~Gii 124 (758)
-.|++|||||++| .|++
T Consensus 29 liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 29 LLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EECCTTSSHHHHHHHHHTSS
T ss_pred EECCCCChHHHHHHHHHcCC
Confidence 3699999999887 3654
Done!