Query 004380
Match_columns 758
No_of_seqs 390 out of 2353
Neff 5.4
Searched_HMMs 46136
Date Thu Mar 28 22:27:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004380.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004380hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0520 Uncharacterized conser 100.0 3E-101 7E-106 893.3 30.0 618 10-758 20-653 (975)
2 PF03859 CG-1: CG-1 domain; I 100.0 9.8E-62 2.1E-66 444.9 9.9 117 19-136 2-118 (118)
3 cd01175 IPT_COE IPT domain of 99.6 5E-15 1.1E-19 128.8 8.4 81 508-595 1-83 (85)
4 KOG4412 26S proteasome regulat 99.5 3.9E-14 8.4E-19 140.1 4.2 73 684-758 112-184 (226)
5 PF13857 Ank_5: Ankyrin repeat 99.3 7.1E-13 1.5E-17 108.1 4.4 55 699-753 1-56 (56)
6 PF01833 TIG: IPT/TIG domain; 99.2 8.7E-11 1.9E-15 101.4 8.3 84 508-595 1-85 (85)
7 KOG4412 26S proteasome regulat 99.1 6.1E-11 1.3E-15 117.7 7.1 82 657-758 69-151 (226)
8 cd01179 IPT_plexin_repeat2 Sec 99.1 6.6E-10 1.4E-14 98.3 9.6 84 508-597 1-85 (85)
9 PF12796 Ank_2: Ankyrin repeat 99.1 4.5E-10 9.8E-15 98.1 8.1 60 695-758 12-71 (89)
10 KOG0512 Fetal globin-inducing 99.1 2.4E-10 5.2E-15 112.8 6.7 75 681-757 66-141 (228)
11 PF13637 Ank_4: Ankyrin repeat 99.0 2.5E-10 5.4E-15 91.9 4.9 46 713-758 1-46 (54)
12 cd00102 IPT Immunoglobulin-lik 99.0 1.9E-09 4.2E-14 94.2 9.1 84 508-596 1-88 (89)
13 KOG0515 p53-interacting protei 99.0 5.4E-10 1.2E-14 124.4 6.3 74 682-757 554-627 (752)
14 PLN03192 Voltage-dependent pot 99.0 2.4E-09 5.2E-14 129.8 11.8 75 682-758 529-603 (823)
15 KOG0509 Ankyrin repeat and DHH 99.0 7.5E-10 1.6E-14 126.4 6.8 65 694-758 126-190 (600)
16 PHA02795 ankyrin-like protein; 98.9 1.6E-09 3.4E-14 122.0 8.9 66 692-757 200-265 (437)
17 PHA02946 ankyin-like protein; 98.9 3.8E-09 8.1E-14 119.8 11.5 66 692-757 51-116 (446)
18 KOG0509 Ankyrin repeat and DHH 98.9 1.9E-09 4E-14 123.2 7.3 75 682-758 82-157 (600)
19 PHA02743 Viral ankyrin protein 98.9 3E-09 6.5E-14 104.8 7.7 64 695-758 75-140 (166)
20 PHA02736 Viral ankyrin protein 98.9 5E-09 1.1E-13 101.1 7.7 64 695-758 73-138 (154)
21 PHA02743 Viral ankyrin protein 98.8 7.5E-09 1.6E-13 102.0 8.4 64 695-758 39-106 (166)
22 PHA02791 ankyrin-like protein; 98.8 7.6E-09 1.7E-13 111.0 8.7 64 695-758 76-140 (284)
23 KOG0195 Integrin-linked kinase 98.8 3.6E-09 7.9E-14 111.1 5.5 74 683-757 38-111 (448)
24 PHA03095 ankyrin-like protein; 98.8 8.3E-09 1.8E-13 115.9 8.9 65 694-758 238-302 (471)
25 PTZ00322 6-phosphofructo-2-kin 98.8 1.8E-08 3.9E-13 119.6 11.2 64 695-758 97-160 (664)
26 PHA02741 hypothetical protein; 98.8 1.6E-08 3.5E-13 99.6 9.0 65 694-758 78-144 (169)
27 PHA02875 ankyrin repeat protei 98.8 1.3E-08 2.8E-13 113.0 9.3 63 695-757 117-179 (413)
28 PHA02884 ankyrin repeat protei 98.8 1.8E-08 3.8E-13 109.0 9.7 63 695-757 85-148 (300)
29 PHA02741 hypothetical protein; 98.8 1.8E-08 3.8E-13 99.3 8.3 57 702-758 49-110 (169)
30 PHA02791 ankyrin-like protein; 98.8 1.5E-08 3.2E-13 108.8 7.7 73 683-758 34-106 (284)
31 PHA02730 ankyrin-like protein; 98.7 1.8E-08 3.8E-13 118.6 7.7 62 696-757 23-88 (672)
32 KOG4177 Ankyrin [Cell wall/mem 98.7 2.1E-08 4.5E-13 122.6 7.6 65 694-758 554-618 (1143)
33 PHA02884 ankyrin repeat protei 98.7 4.2E-08 9.1E-13 106.1 9.0 76 682-758 36-116 (300)
34 PHA02878 ankyrin repeat protei 98.7 2.7E-08 5.9E-13 113.0 7.7 74 682-756 171-244 (477)
35 PHA02859 ankyrin repeat protei 98.7 4.4E-08 9.4E-13 100.1 8.4 65 693-757 138-203 (209)
36 PHA02989 ankyrin repeat protei 98.7 2.4E-08 5.3E-13 114.1 7.2 59 700-758 243-301 (494)
37 PHA03100 ankyrin repeat protei 98.7 5.8E-08 1.3E-12 109.5 9.8 66 693-758 230-295 (480)
38 cd00603 IPT_PCSR IPT domain of 98.7 9.2E-08 2E-12 84.6 9.0 85 508-596 1-89 (90)
39 PHA02874 ankyrin repeat protei 98.7 4.6E-08 1E-12 109.8 8.7 62 696-757 140-201 (434)
40 KOG0508 Ankyrin repeat protein 98.7 1.3E-08 2.9E-13 112.8 4.1 75 682-758 121-195 (615)
41 PHA02798 ankyrin-like protein; 98.7 3.4E-08 7.3E-13 112.8 7.5 66 693-758 89-157 (489)
42 KOG4177 Ankyrin [Cell wall/mem 98.7 2.9E-08 6.2E-13 121.3 7.2 70 689-758 516-585 (1143)
43 PHA02878 ankyrin repeat protei 98.7 5E-08 1.1E-12 110.9 8.7 71 683-754 205-277 (477)
44 PHA02859 ankyrin repeat protei 98.7 5.1E-08 1.1E-12 99.7 7.8 64 694-757 104-170 (209)
45 smart00429 IPT ig-like, plexin 98.7 9E-08 2E-12 84.6 8.3 83 508-595 2-89 (90)
46 PHA02946 ankyin-like protein; 98.6 4.8E-08 1E-12 110.9 8.0 64 694-758 189-254 (446)
47 cd01180 IPT_plexin_repeat1 Fir 98.6 1E-07 2.2E-12 86.1 8.0 88 508-597 1-94 (94)
48 PHA03095 ankyrin-like protein; 98.6 5.3E-08 1.2E-12 109.4 7.6 74 682-755 50-126 (471)
49 PHA02798 ankyrin-like protein; 98.6 5.6E-08 1.2E-12 111.0 7.1 63 695-758 241-303 (489)
50 PHA02874 ankyrin repeat protei 98.6 7.7E-08 1.7E-12 108.0 7.9 64 695-758 106-169 (434)
51 PHA02876 ankyrin repeat protei 98.6 1.2E-07 2.5E-12 112.6 9.2 75 683-758 149-223 (682)
52 KOG0514 Ankyrin repeat protein 98.6 5.8E-08 1.3E-12 105.1 5.7 76 681-758 343-419 (452)
53 KOG0705 GTPase-activating prot 98.6 1.6E-07 3.4E-12 106.2 9.0 163 575-757 533-705 (749)
54 PHA02875 ankyrin repeat protei 98.6 1.7E-07 3.7E-12 104.0 8.9 64 695-758 50-114 (413)
55 KOG0512 Fetal globin-inducing 98.5 7.3E-08 1.6E-12 95.5 4.9 74 682-756 100-173 (228)
56 COG0666 Arp FOG: Ankyrin repea 98.5 1.7E-07 3.6E-12 91.6 7.3 62 697-758 90-159 (235)
57 PHA02716 CPXV016; CPX019; EVM0 98.5 1.2E-07 2.6E-12 113.4 7.4 62 694-755 193-256 (764)
58 PHA03100 ankyrin repeat protei 98.5 2E-07 4.3E-12 105.2 8.5 63 695-757 158-226 (480)
59 PLN03192 Voltage-dependent pot 98.5 1.9E-07 4E-12 113.5 8.4 75 683-758 562-667 (823)
60 PHA02917 ankyrin-like protein; 98.5 2E-07 4.3E-12 110.7 8.0 70 689-758 147-241 (661)
61 PHA02716 CPXV016; CPX019; EVM0 98.5 1.3E-07 2.9E-12 113.0 6.4 59 700-758 484-547 (764)
62 PHA02989 ankyrin repeat protei 98.5 2.2E-07 4.8E-12 106.2 7.5 63 695-757 126-192 (494)
63 KOG1710 MYND Zn-finger and ank 98.5 2.3E-07 5E-12 97.9 6.7 102 655-758 22-124 (396)
64 KOG0505 Myosin phosphatase, re 98.5 3.3E-07 7.2E-12 103.3 8.1 57 702-758 187-243 (527)
65 KOG1710 MYND Zn-finger and ank 98.4 4.2E-07 9.1E-12 96.0 7.8 79 678-758 12-91 (396)
66 PHA02876 ankyrin repeat protei 98.4 4.3E-07 9.3E-12 107.8 8.7 65 693-757 388-453 (682)
67 KOG0514 Ankyrin repeat protein 98.4 3.4E-07 7.4E-12 99.2 7.0 63 695-758 322-385 (452)
68 PF12796 Ank_2: Ankyrin repeat 98.4 4.4E-07 9.5E-12 79.2 5.8 61 682-743 29-89 (89)
69 PHA02730 ankyrin-like protein; 98.4 5E-07 1.1E-11 106.5 7.1 62 695-756 444-506 (672)
70 PHA02736 Viral ankyrin protein 98.4 3E-07 6.4E-12 88.7 4.1 52 707-758 49-104 (154)
71 KOG0505 Myosin phosphatase, re 98.4 2.9E-07 6.4E-12 103.8 4.3 72 686-758 47-118 (527)
72 COG0666 Arp FOG: Ankyrin repea 98.3 5.9E-07 1.3E-11 87.7 5.7 66 693-758 124-192 (235)
73 KOG4214 Myotrophin and similar 98.3 5.5E-07 1.2E-11 81.3 4.9 56 702-758 24-79 (117)
74 PHA02917 ankyrin-like protein; 98.3 8.4E-07 1.8E-11 105.5 7.8 61 695-755 434-494 (661)
75 PF00023 Ank: Ankyrin repeat H 98.3 5.7E-07 1.2E-11 65.5 4.0 33 712-744 1-33 (33)
76 PHA02792 ankyrin-like protein; 98.3 7.9E-07 1.7E-11 104.1 6.9 61 695-755 392-452 (631)
77 cd01181 IPT_plexin_repeat3 Thi 98.3 1.8E-06 3.9E-11 79.0 7.5 73 508-583 1-81 (99)
78 KOG0502 Integral membrane anky 98.3 3E-07 6.6E-12 94.1 2.5 68 690-757 203-270 (296)
79 cd02849 CGTase_C_term Cgtase ( 98.3 4.3E-06 9.4E-11 73.9 9.1 79 508-595 3-81 (81)
80 PF13606 Ank_3: Ankyrin repeat 98.3 7.8E-07 1.7E-11 64.1 3.6 30 712-741 1-30 (30)
81 PHA02792 ankyrin-like protein; 98.2 2E-06 4.3E-11 100.8 8.2 65 694-758 353-422 (631)
82 KOG0508 Ankyrin repeat protein 98.2 6E-07 1.3E-11 99.9 3.2 76 680-758 152-227 (615)
83 KOG0510 Ankyrin repeat protein 98.2 1.4E-06 3.1E-11 102.1 6.3 64 695-758 321-389 (929)
84 KOG0510 Ankyrin repeat protein 98.2 1.1E-06 2.3E-11 103.1 4.9 76 682-758 276-353 (929)
85 TIGR00870 trp transient-recept 98.2 2.4E-06 5.1E-11 102.7 6.8 74 682-757 132-219 (743)
86 cd00204 ANK ankyrin repeats; 98.2 9E-06 1.9E-10 72.4 8.9 64 694-757 54-117 (126)
87 PHA02795 ankyrin-like protein; 98.2 3.4E-06 7.3E-11 95.5 7.5 66 693-758 162-233 (437)
88 cd00204 ANK ankyrin repeats; 98.0 2.9E-05 6.3E-10 69.1 8.8 65 694-758 21-85 (126)
89 KOG0522 Ankyrin repeat protein 98.0 9.4E-06 2E-10 91.8 6.7 57 702-758 44-100 (560)
90 cd00604 IPT_CGTD IPT domain (d 98.0 3.2E-05 7E-10 68.4 8.5 80 508-596 1-80 (81)
91 KOG0818 GTPase-activating prot 98.0 1.7E-05 3.7E-10 88.8 8.1 76 682-758 136-212 (669)
92 KOG0195 Integrin-linked kinase 97.9 8.4E-06 1.8E-10 86.3 4.4 62 692-753 79-140 (448)
93 TIGR00870 trp transient-recept 97.9 3E-05 6.6E-10 93.2 9.8 49 710-758 125-187 (743)
94 PF13637 Ank_4: Ankyrin repeat 97.9 2.7E-05 5.8E-10 62.6 5.5 49 684-733 6-54 (54)
95 KOG0502 Integral membrane anky 97.8 1.5E-05 3.3E-10 81.9 4.6 75 682-758 164-238 (296)
96 KOG4214 Myotrophin and similar 97.6 0.00011 2.4E-09 66.7 6.2 62 692-753 46-107 (117)
97 KOG0507 CASK-interacting adapt 97.6 2.3E-05 5E-10 91.6 2.3 64 695-758 97-160 (854)
98 KOG0783 Uncharacterized conser 97.6 2.1E-05 4.7E-10 92.3 1.0 61 695-755 67-128 (1267)
99 KOG3676 Ca2+-permeable cation 97.5 0.00012 2.6E-09 86.6 6.7 75 682-758 244-320 (782)
100 KOG3676 Ca2+-permeable cation 97.5 0.00016 3.5E-09 85.5 7.4 72 683-755 188-282 (782)
101 KOG0506 Glutaminase (contains 97.5 5.8E-05 1.2E-09 84.4 3.4 72 686-758 513-585 (622)
102 KOG0515 p53-interacting protei 97.5 0.00017 3.7E-09 81.6 6.9 58 693-750 596-654 (752)
103 KOG0507 CASK-interacting adapt 97.4 0.00015 3.2E-09 85.2 4.8 75 682-758 53-127 (854)
104 PF13857 Ank_5: Ankyrin repeat 97.3 0.0001 2.2E-09 60.2 1.7 27 732-758 1-28 (56)
105 PTZ00322 6-phosphofructo-2-kin 97.2 0.00042 9E-09 82.9 6.5 71 683-754 119-196 (664)
106 KOG0783 Uncharacterized conser 96.8 0.0015 3.2E-08 77.5 5.2 53 706-758 45-98 (1267)
107 cd00602 IPT_TF IPT domain of e 96.5 0.0068 1.5E-07 56.0 6.8 82 509-596 2-100 (101)
108 KOG3610 Plexins (functional se 96.2 0.012 2.6E-07 72.7 8.4 91 504-599 139-232 (1025)
109 KOG0521 Putative GTPase activa 96.0 0.006 1.3E-07 74.1 4.4 64 693-756 669-732 (785)
110 cd01178 IPT_NFAT IPT domain of 95.9 0.023 4.9E-07 52.5 6.9 82 507-596 1-100 (101)
111 KOG0782 Predicted diacylglycer 95.9 0.0094 2E-07 68.3 5.3 54 703-756 889-944 (1004)
112 KOG4369 RTK signaling protein 95.9 0.0024 5.2E-08 77.6 0.6 67 692-758 769-836 (2131)
113 smart00248 ANK ankyrin repeats 95.7 0.014 3E-07 37.9 3.6 29 712-740 1-29 (30)
114 KOG0520 Uncharacterized conser 95.4 0.0051 1.1E-07 74.9 0.9 73 686-758 614-692 (975)
115 KOG4369 RTK signaling protein 95.1 0.012 2.6E-07 71.9 2.4 71 688-758 1002-1072(2131)
116 cd01176 IPT_RBP-Jkappa IPT dom 94.9 0.091 2E-06 47.5 6.8 66 524-596 20-96 (97)
117 PF13606 Ank_3: Ankyrin repeat 94.8 0.017 3.7E-07 41.6 1.8 14 745-758 1-14 (30)
118 KOG0511 Ankyrin repeat protein 94.8 0.027 5.8E-07 62.4 4.1 72 682-756 40-111 (516)
119 KOG2505 Ankyrin repeat protein 94.8 0.032 6.9E-07 63.6 4.8 70 685-754 396-471 (591)
120 KOG0782 Predicted diacylglycer 94.8 0.034 7.3E-07 64.0 5.0 76 681-757 901-978 (1004)
121 KOG0511 Ankyrin repeat protein 94.1 0.091 2E-06 58.3 6.2 45 714-758 37-81 (516)
122 PF00023 Ank: Ankyrin repeat H 94.0 0.032 7E-07 40.4 1.7 14 745-758 1-14 (33)
123 KOG0521 Putative GTPase activa 93.8 0.036 7.8E-07 67.6 2.6 49 710-758 653-701 (785)
124 cd01177 IPT_NFkappaB IPT domai 93.3 0.19 4.1E-06 46.6 5.8 82 509-596 2-101 (102)
125 KOG0506 Glutaminase (contains 92.7 0.06 1.3E-06 61.1 2.1 50 709-758 502-551 (622)
126 KOG0818 GTPase-activating prot 91.8 0.17 3.6E-06 57.9 4.1 52 707-758 121-179 (669)
127 PF08549 SWI-SNF_Ssr4: Fungal 91.3 0.43 9.3E-06 56.7 6.9 103 27-137 30-155 (669)
128 KOG0705 GTPase-activating prot 82.6 1.7 3.8E-05 50.8 5.0 50 690-739 671-720 (749)
129 KOG3836 HLH transcription fact 77.5 2.2 4.8E-05 50.3 3.8 50 699-748 415-464 (605)
130 KOG3609 Receptor-activated Ca2 75.7 9.1 0.0002 46.9 8.3 79 658-741 71-159 (822)
131 KOG3609 Receptor-activated Ca2 73.6 2.6 5.6E-05 51.4 3.1 16 743-758 128-143 (822)
132 KOG0522 Ankyrin repeat protein 72.1 4.2 9.1E-05 47.4 4.2 41 695-735 70-110 (560)
133 KOG3610 Plexins (functional se 70.9 4.4 9.5E-05 51.0 4.3 77 505-581 47-126 (1025)
134 KOG3836 HLH transcription fact 48.6 8.2 0.00018 45.8 1.2 58 509-581 244-302 (605)
135 PF09099 Qn_am_d_aIII: Quinohe 46.6 68 0.0015 28.8 6.4 63 508-579 2-69 (81)
136 PF05587 Anth_Ig: Anthrax rece 36.9 11 0.00025 35.3 0.0 75 509-585 7-88 (105)
137 PF14545 DBB: Dof, BCAP, and B 34.3 92 0.002 30.9 5.8 68 513-585 3-78 (142)
138 KOG3743 Recombination signal b 33.9 43 0.00092 39.5 3.9 41 522-569 506-546 (622)
139 PF03106 WRKY: WRKY DNA -bindi 31.2 21 0.00045 30.1 0.7 9 70-78 2-10 (60)
140 PF06128 Shigella_OspC: Shigel 31.0 73 0.0016 34.1 4.7 48 692-739 229-280 (284)
141 TIGR03437 Soli_cterm Solibacte 26.2 2E+02 0.0043 30.3 7.0 63 522-584 4-75 (215)
142 smart00774 WRKY DNA binding do 24.0 29 0.00063 29.3 0.3 9 70-78 2-10 (59)
143 COG4674 Uncharacterized ABC-ty 23.4 1.5E+02 0.0032 31.5 5.2 45 542-586 9-56 (249)
144 PF03158 DUF249: Multigene fam 20.1 1E+02 0.0022 32.0 3.3 37 716-758 146-182 (192)
No 1
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=100.00 E-value=3.3e-101 Score=893.33 Aligned_cols=618 Identities=39% Similarity=0.628 Sum_probs=413.1
Q ss_pred CChhhHHHHHHHHHHhcCChHHHHHHHhccccceeCcCCCCCCCCcceEeeehhhhhhhcccCccceecCCCcchHhhhh
Q 004380 10 GNQLDIEQILIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHE 89 (758)
Q Consensus 10 ~~~l~~~~~~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~sgs~~l~~r~~~~~frkDg~~w~kkk~g~~vre~h~ 89 (758)
...||+..|++++++|||+|+||+.||+||++|.++.+|++||.+||+||||||+|||||||||+|||||||||||||||
T Consensus 20 l~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtirEaHe 99 (975)
T KOG0520|consen 20 LQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIREAHE 99 (975)
T ss_pred hhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcChHHHH
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCEeeEEEEeeccccCcccceeeeecccccccceEEEeeeeccCCccccccccccCCCCCCCCCCccCCCCCCccC
Q 004380 90 RLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVKGNRTNFNRAKVAEGATPYSQENEETIPNSEVEG 169 (758)
Q Consensus 90 ~lkv~~~~~~~~~yah~~~~~~f~rr~yw~l~~~~~~ivlvhy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 169 (758)
||||||+|+||||||||+++|||||||||||++.++||||||||||++.+. ...+..+.. .+
T Consensus 100 ~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~-~~~~~~~~~-----------------~s 161 (975)
T KOG0520|consen 100 KLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNED-AAKGAGEIF-----------------SS 161 (975)
T ss_pred hhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccc-cccCccccc-----------------cc
Confidence 999999999999999999999999999999999999999999999998662 111111110 12
Q ss_pred CCCCCCCCCCCCCCCcccc-CCcCcc-CcchhhhhhcccCCCCCccccccc------cccchhhhhcccCCCCCCCCCCc
Q 004380 170 SQSSGFHPNSYQMPSQTAD-TSLNSA-QASEYEDAESVYNNQASSRFHSFL------DLQQPVAEKIDAGLADPYYPSSL 241 (758)
Q Consensus 170 ~~s~~~~~~~~~~~s~~~~-~s~~s~-~~se~e~~~s~~~~~~~s~~~~~~------~~q~~~~~~~~~~~~~~~~~~~~ 241 (758)
++++.- + ...+-.+ .+|.-. +.+..++++++++.+....+.... .-+++.++..+ +++
T Consensus 162 ~~sd~~--~---S~~~~~~q~~~~~~~~~s~~~~v~~i~s~~~~~~~g~~~~~s~~h~i~~~~~~s~~-----~~~---- 227 (975)
T KOG0520|consen 162 IISDKA--W---SLNQLAGQLSPIFHNHSSVNEDVAEINSNQTGNALGSVFGNSRNHRIRLHEVNSLD-----PLY---- 227 (975)
T ss_pred cccccc--c---cHHHhhcccCcchhcccchHHHHHHHhhhccccccccccCcchhhhhcccccCCcc-----ccc----
Confidence 222221 0 1111111 122111 335566666654332222221110 11111111100 000
Q ss_pred ccCcCCCcccCCCCCCCCCccccCCCCCCCCCCcCCCCCCCCCCchHHHhhhcCCCCCCCCCccCCCCCCCCccCCCCcc
Q 004380 242 TNNYQGKFSVVPGADFISPAQTDKSRNSNDTGLTYEPQKNLDFPSWEDVLQNCSQGVGSQPEALGDIPNQGYDILGEPFT 321 (758)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (758)
...++..+ ... ...++..-. . ........+.+...|.++++++....-....++ .
T Consensus 228 ----~~p~s~~s-~~~-~~~~~~~~~---~-~~~~~~~rs~~~s~~te~l~n~~~~~~~~g~s~---------------s 282 (975)
T KOG0520|consen 228 ----KLPVSDDS-LNL-SAPKPIDLP---K-GPTSVKQRSSSPSYFTEILGNAPSGLVSQGNSL---------------S 282 (975)
T ss_pred ----cccccCCc-ccc-ccCCCcccc---c-CCcchhhcCCCCcchhhhcccCCCccccccccc---------------c
Confidence 00111000 000 000000000 0 000000011233457777776662111111110 0
Q ss_pred CCccccccccCcccccccccccccCCcCCCCCccccccccccccccccccccccccccCccCCCCCCCCCCCCCCccccc
Q 004380 322 NSFGERKEFGSHLQTRGEWQASRNDSSHLSNWPMDQKVYLDSAHDLTSQSCEQGAAHDGLLDSLRPPHAHPNMENDVHEQ 401 (758)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (758)
+.+ +... .|+. +..+..+ ..+ ..+|.|... +.+....+
T Consensus 283 ~~l--~~i~--------~~~~--------~~~~~~~-----------------~p~----~~nf~~~ss---~~s~~~~~ 320 (975)
T KOG0520|consen 283 SSL--QRIS--------SFTG--------LDNAAYE-----------------QPN----SQNFEPNSS---LNSHVTGQ 320 (975)
T ss_pred cch--hhcc--------cccc--------ccccccc-----------------CCc----ccccccccc---CCCCcccc
Confidence 000 0000 1111 0000000 000 000000000 00000000
Q ss_pred CCccccccCcCCCCCcccccccccccchhcccccccc--cccccccccchhhhHhhhcCccccccccCCCCccccccccc
Q 004380 402 LPNAEHGHLLKSDPESSLTIDGKSFYSSAIKQHLIDG--STEGLKKLDSFNRWMSKELGDVKESNMQSSSGAYWETVESE 479 (758)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~~~~l~~~dsf~rWm~~el~~~~d~~~~~ss~~~~~~~~~~ 479 (758)
..+.+ .....+...+-.-| .....+. ..+||++.|||.|||+ .+++..|+.-.++-+.+|....
T Consensus 321 ----~~g~g--~~~~~~sa~~~~~P-----~~~~~~~~~~~~~l~sgdsf~~~~~-t~~e~~d~~q~~s~~~~~~p~~-- 386 (975)
T KOG0520|consen 321 ----SYGQG--LQARSPSATSESRP-----ITSAADAALSELGLKSGDSFSRWAS-TFGEISDLGQDPSGEAVWTPEN-- 386 (975)
T ss_pred ----ccCcc--ccCCCcccccccCC-----cchhhccccccccccccccccchhh-hhcccccCCCCCccccccccCC--
Confidence 00000 00011111112223 1112231 2789999999999995 8888888773344356787552
Q ss_pred CCcCCCCCCCccccccccCCCCCCCCCceEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEe
Q 004380 480 NGVDDSGVSPQARLDTYMMSPSLSQDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVA 559 (758)
Q Consensus 480 ~~~~~~~~~~~~~ld~~~~~~s~~q~q~fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q 559 (758)
+..++ +.+.+++| +++|+|+|+||||+|+|+.||+||+|+|.+ .+.+..+|+||||+++|||++|+
T Consensus 387 ~~~~~---------~~s~~~~S-~p~qlf~I~DfSP~Wsy~~ggvKVlV~G~~----~~~~~~~ysc~Fg~~~VPAeliq 452 (975)
T KOG0520|consen 387 DPMGP---------PGSFLSPS-SPEQLFTITDFSPEWSYLDGGVKVLVTGFP----QDETRSNYSCMFGEQRVPAELIQ 452 (975)
T ss_pred CcCCC---------cccccCCC-CCcceeeeeccCcccccCCCCcEEEEecCc----cccCCCceEEEeCCccccHHHhh
Confidence 11111 11236777 449999999999999999999999999972 34567899999999999999999
Q ss_pred cCceeeecCCCCCcceeEEEEeC-CCcccCcceecccccCCCCCcccccccCCcchhhhhhhhhhhcc-cCCCCCCCCCC
Q 004380 560 GGVLRCHTSSQKVGRVPFYVTCS-NRLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLC-LTSVSTPNYDP 637 (758)
Q Consensus 560 ~GvLrC~~PPh~pG~VpLyVtcs-n~~acSEVreFEYr~~~~~~~~a~d~~~~~~e~~LqmRl~kLL~-~~~~~~s~~~~ 637 (758)
+|||||+||||.||.|+|||+|+ ++.+|||+|+|+|...+.+.++..+..-...++.++.|+..|+. ......+...+
T Consensus 453 ~GVLrC~~P~h~~G~V~l~V~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d~~~~~sl~~rl~~~~~r~~~~~~s~~~~ 532 (975)
T KOG0520|consen 453 EGVLRCYAPPHEPGVVNLQVTCRISGLACSEVREFAYLVQPSQQIDKLSWEDFLFQMSLLHRLETMLNRKQSILSSKPST 532 (975)
T ss_pred cceeeeecCccCCCeEEEEEEecccceeeeeehheeecccCcccccccccccchhhhHHHHHHHHHHHHhHhHhhccCCc
Confidence 99999999999999999999999 89999999999999988887666533334455666677777765 22233355566
Q ss_pred CChhHHHH--HHHHHhhhccCCCcchhH-HHHhhhhcCCChhHHHHHHHHHHHHhhhHHHHHHHHHhC-CCCCCccCCCC
Q 004380 638 SNLSDISQ--LNSKISSLLKDENDDWDL-MLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG-GKGPCVLDHCG 713 (758)
Q Consensus 638 s~~~ek~q--l~~kI~sLl~~d~~~w~~-Lik~~~~~~~s~~~~~d~LL~~llkekl~e~Lv~~Lle~-Gad~N~~D~~G 713 (758)
.+..++.. +..|+..+ .++|.+ +++....+.....+.++.++++++++.++.||++++++. |......|.+|
T Consensus 533 ~n~~~~~~~~l~skv~~l----~~~~~~r~~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~ 608 (975)
T KOG0520|consen 533 ENTSDAESGNLASKVVHL----LNEWAYRLLKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDG 608 (975)
T ss_pred cccccccchhHHHHHHHH----HHHHHHHHHhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccC
Confidence 66666666 88898888 789999 999999999999999999999999999999999999986 77788899999
Q ss_pred CcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 714 ~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++.+|+||..|+.|++.+.+..|..++++|.+||||||||+++||
T Consensus 609 qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~ 653 (975)
T KOG0520|consen 609 QGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGR 653 (975)
T ss_pred CChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCH
Confidence 999999999999999999999999999999999999999999997
No 2
>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=100.00 E-value=9.8e-62 Score=444.90 Aligned_cols=117 Identities=67% Similarity=1.210 Sum_probs=114.5
Q ss_pred HHHHHHhcCChHHHHHHHhccccceeCcCCCCCCCCcceEeeehhhhhhhcccCccceecCCCcchHhhhhhhccCCEee
Q 004380 19 LIEAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDV 98 (758)
Q Consensus 19 ~~~~~~rwl~~~ei~~il~~~~~~~~~~~~~~~p~sgs~~l~~r~~~~~frkDg~~w~kkk~g~~vre~h~~lkv~~~~~ 98 (758)
++| ++|||+|+|||+||+||++|.+..+||+||+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus 2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~ 80 (118)
T PF03859_consen 2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV 80 (118)
T ss_pred chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence 445 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccccCcccceeeeecccccccceEEEeeeecc
Q 004380 99 LHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREVK 136 (758)
Q Consensus 99 ~~~~yah~~~~~~f~rr~yw~l~~~~~~ivlvhy~~~~ 136 (758)
||||||||+++|+||||||||||++||||||||||||+
T Consensus 81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~ 118 (118)
T PF03859_consen 81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK 118 (118)
T ss_pred eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence 99999999999999999999999999999999999985
No 3
>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors. COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.
Probab=99.58 E-value=5e-15 Score=128.77 Aligned_cols=81 Identities=21% Similarity=0.360 Sum_probs=71.7
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCC-CCCcceeEEEEeCCCcc
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-QKVGRVPFYVTCSNRLS 586 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PP-h~pG~VpLyVtcsn~~a 586 (758)
+.|++|+|+||+++|||||+|+|.+|.++ +.|+||+..|-.|+|.+.+|+|.+|| |.||.|.|.++.....-
T Consensus 1 P~I~ai~P~eG~~tGGt~VtI~GenF~~g-------l~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~~~~~~ 73 (85)
T cd01175 1 PCIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQF 73 (85)
T ss_pred CcccEecCCCCcccCCeEEEEECCCCCCC-------cEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEECceee
Confidence 36999999999999999999999999988 56999999999999999999999999 89999999999988766
Q ss_pred cCc-ceeccc
Q 004380 587 CSE-VREFEY 595 (758)
Q Consensus 587 cSE-VreFEY 595 (758)
|.- .-.|-|
T Consensus 74 ~~~~p~~f~y 83 (85)
T cd01175 74 CKGTPGRFVY 83 (85)
T ss_pred ccCCCceEEe
Confidence 643 345554
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=3.9e-14 Score=140.06 Aligned_cols=73 Identities=33% Similarity=0.302 Sum_probs=64.4
Q ss_pred HHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 684 QKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 684 ~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.++-|..+. +.++|+++|+.|+.+|+.|+||||.||+.|..++|++|+..||.+|.+|+.||||||.|..-||
T Consensus 112 yAagK~r~e--IaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~ 184 (226)
T KOG4412|consen 112 YAAGKGRLE--IAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGH 184 (226)
T ss_pred hhhcCChhh--HHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccC
Confidence 334444444 7788999999999999999999999999999999999999999999999999999999966554
No 5
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.34 E-value=7.1e-13 Score=108.12 Aligned_cols=55 Identities=31% Similarity=0.384 Sum_probs=33.7
Q ss_pred HHhCC-CCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHH
Q 004380 699 AAEGG-KGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753 (758)
Q Consensus 699 Lle~G-ad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~A 753 (758)
|++.| +++|..|..|+||||+||..|+.++|++||..|++++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 35556 88999999999999999999999999999999999999999999999998
No 6
>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....
Probab=99.17 E-value=8.7e-11 Score=101.39 Aligned_cols=84 Identities=24% Similarity=0.321 Sum_probs=74.7
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeE-EEecCceeeecCCCCCcceeEEEEeCCCcc
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAE-IVAGGVLRCHTSSQKVGRVPFYVTCSNRLS 586 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpae-i~q~GvLrC~~PPh~pG~VpLyVtcsn~~a 586 (758)
+.|++|+|+|++..||++|+|.|.+|.. ....+.|+||+.+.+.. ++.+..|+|.+|++.+|.++|+|..++...
T Consensus 1 P~I~si~P~~~~~~gg~~ItI~G~~f~~----~~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~ 76 (85)
T PF01833_consen 1 PVITSISPNSGSISGGTNITITGSNFGS----NSSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQI 76 (85)
T ss_dssp SEEEEEESSEEETTCTSEEEEEEESSES----SSTTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEE
T ss_pred CEEEEEECCeEecCCCEEEEEEEEeecc----cCCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCe
Confidence 4799999999999999999999999922 12569999999999988 999999999999999999999999999888
Q ss_pred cCcceeccc
Q 004380 587 CSEVREFEY 595 (758)
Q Consensus 587 cSEVreFEY 595 (758)
+++...|+|
T Consensus 77 ~~~~~~F~Y 85 (85)
T PF01833_consen 77 YSNNTSFTY 85 (85)
T ss_dssp EEEEEEEEE
T ss_pred EECCeeeEC
Confidence 899999988
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=6.1e-11 Score=117.65 Aligned_cols=82 Identities=24% Similarity=0.301 Sum_probs=69.0
Q ss_pred CCcchhHHHHhhhhcCCChhHHHHHHHHHHHHhhhHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhc
Q 004380 657 ENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEG-GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA 735 (758)
Q Consensus 657 d~~~w~~Lik~~~~~~~s~~~~~d~LL~~llkekl~e~Lv~~Lle~-Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~ 735 (758)
|+..|.++.-+..... .-+++.|+.+ |+++|..+..|+|+||+||..|..+++.+|+++
T Consensus 69 DdaGWtPlhia~s~g~--------------------~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ 128 (226)
T KOG4412|consen 69 DDAGWTPLHIAASNGN--------------------DEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK 128 (226)
T ss_pred cccCCchhhhhhhcCc--------------------HHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc
Confidence 4678988875554321 1144555655 999999999999999999999999999999999
Q ss_pred CCCccccCCCCCcHHHHHHHcCC
Q 004380 736 GVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 736 GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
||.|+++|+.|.||||-||..|.
T Consensus 129 ga~i~~kD~~~qtplHRAAavGk 151 (226)
T KOG4412|consen 129 GALIRIKDKQGQTPLHRAAAVGK 151 (226)
T ss_pred CCCCcccccccCchhHHHHhccc
Confidence 99999999999999999998773
No 8
>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=99.07 E-value=6.6e-10 Score=98.26 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=71.6
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCCC-CCcceeEEEEeCCCcc
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRLS 586 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PPh-~pG~VpLyVtcsn~~a 586 (758)
+.|+.|+|..|+..|||+|+|.|.+|..+ ....|+||+.+.....+....|.|.+|++ .+|.++|.|..++..
T Consensus 1 P~I~~i~P~~Gp~~GGT~vtI~G~~~~~~-----~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~~~- 74 (85)
T cd01179 1 PSITSLSPSYGPQSGGTRLTITGKHLNAG-----SSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDGAR- 74 (85)
T ss_pred CeeeEEcCCCCCCCCCEEEEEEEECCCCC-----CeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECCcc-
Confidence 47999999999999999999999999875 44789999997777777899999999997 578999999998863
Q ss_pred cCcceeccccc
Q 004380 587 CSEVREFEYRA 597 (758)
Q Consensus 587 cSEVreFEYr~ 597 (758)
.+....|+|.+
T Consensus 75 ~~~~~~F~Y~~ 85 (85)
T cd01179 75 RLAPLVFTYTE 85 (85)
T ss_pred cCCCccEEEeC
Confidence 34457888863
No 9
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.06 E-value=4.5e-10 Score=98.07 Aligned_cols=60 Identities=35% Similarity=0.408 Sum_probs=53.9
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+++.|++.+.+++. |.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 12 ~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 71 (89)
T PF12796_consen 12 ILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGN 71 (89)
T ss_dssp HHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTH
T ss_pred HHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCC
Confidence 56678888888776 9999999999999999999999999999999999999999999874
No 10
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.05 E-value=2.4e-10 Score=112.78 Aligned_cols=75 Identities=25% Similarity=0.187 Sum_probs=62.7
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCC-CCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 681 KLVQKLLKEKLQVWLVQKAAEGGKG-PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 681 ~LL~~llkekl~e~Lv~~Lle~Gad-~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
.++.++-++.+. .++.|++..++ +|.+|++|+||||.||+.|+.++|..|+..||+++++...||||||-||.+.
T Consensus 66 l~lwaae~nrl~--eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 66 LLLWAAEKNRLT--EVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN 141 (228)
T ss_pred HHHHHHhhccHH--HHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc
Confidence 344555555544 45666766666 9999999999999999999999999999999999999999999999999764
No 11
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.03 E-value=2.5e-10 Score=91.93 Aligned_cols=46 Identities=37% Similarity=0.458 Sum_probs=39.2
Q ss_pred CCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 713 GQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 713 G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+||.+||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~ 46 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGN 46 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccC
Confidence 7899999999999999999999999999999999999999999986
No 12
>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.
Probab=98.99 E-value=1.9e-09 Score=94.21 Aligned_cols=84 Identities=26% Similarity=0.259 Sum_probs=70.4
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEee-CCceeeeEEEecCceeeecCCCCC---cceeEEEEeCC
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMF-GEIEVPAEIVAGGVLRCHTSSQKV---GRVPFYVTCSN 583 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmF-Gd~eVpaei~q~GvLrC~~PPh~p---G~VpLyVtcsn 583 (758)
+.|+.|+|.+|+..|||+|+|.|.+|.... .+.|+| |+.......+.+..|.|.+|++.. |.|.|.|...+
T Consensus 1 P~I~~i~P~~g~~~GGt~itI~G~~f~~~~-----~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~ 75 (89)
T cd00102 1 PVITSISPSSGPVSGGTEVTITGSNFGSGS-----NLRVTFGGGVPCSVLSVSSTAIVCTTPPYANPGPGPVEVTVDRGN 75 (89)
T ss_pred CEEeEEECCcCCCCCCeEEEEEEECCCCCC-----cEEEEEeCCCeEEEEEecCCEEEEECCCCCCCCcEEEEEEEeCCC
Confidence 479999999999999999999999998752 689999 999877777899999999999643 78888877665
Q ss_pred CcccCcceecccc
Q 004380 584 RLSCSEVREFEYR 596 (758)
Q Consensus 584 ~~acSEVreFEYr 596 (758)
....+....|+|.
T Consensus 76 ~~~~~~~~~F~Y~ 88 (89)
T cd00102 76 GGITSSPLTFTYV 88 (89)
T ss_pred CcccCCCccEEee
Confidence 3456778889885
No 13
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.98 E-value=5.4e-10 Score=124.42 Aligned_cols=74 Identities=32% Similarity=0.418 Sum_probs=62.9
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
||.+.|...+. |++.++..-.|+...+..|.|+||-|...||.+||+|||..|||||+.|.+||||||+||.|+
T Consensus 554 LLDaaLeGEld--lVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 554 LLDAALEGELD--LVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN 627 (752)
T ss_pred HHhhhhcchHH--HHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC
Confidence 44455555443 556666656688888999999999999999999999999999999999999999999999986
No 14
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.96 E-value=2.4e-09 Score=129.81 Aligned_cols=75 Identities=27% Similarity=0.276 Sum_probs=66.3
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++.++..+. ..+++.|++.|+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+||..||
T Consensus 529 L~~Aa~~g~--~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~ 603 (823)
T PLN03192 529 LLTVASTGN--AALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKH 603 (823)
T ss_pred HHHHHHcCC--HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCC
Confidence 444444333 336778899999999999999999999999999999999999999999999999999999999886
No 15
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.96 E-value=7.5e-10 Score=126.36 Aligned_cols=65 Identities=35% Similarity=0.491 Sum_probs=49.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.++..|+++||+|+.+|.+|.|+||+||..|+.-+|-+||.+|+++|.+|.+|+|||||||++|+
T Consensus 126 ~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~ 190 (600)
T KOG0509|consen 126 SVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGF 190 (600)
T ss_pred HHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcc
Confidence 35667777777777777777777777777777777777777777777777777777777777764
No 16
>PHA02795 ankyrin-like protein; Provisional
Probab=98.95 E-value=1.6e-09 Score=121.97 Aligned_cols=66 Identities=24% Similarity=0.121 Sum_probs=62.7
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 692 ~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
..-+++.|+..|+++|.+|..|+||||+||..|+.++|++|+++||++|.+|..|+||||+|+..|
T Consensus 200 ~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g 265 (437)
T PHA02795 200 VLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRG 265 (437)
T ss_pred HHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence 345778999999999999999999999999999999999999999999999999999999999987
No 17
>PHA02946 ankyin-like protein; Provisional
Probab=98.94 E-value=3.8e-09 Score=119.83 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=61.1
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 692 ~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
..-+++.|++.|+++|.+|..|+||||+||..|+.++|++||++||++|.+|..|+||||+|+..+
T Consensus 51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~ 116 (446)
T PHA02946 51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTD 116 (446)
T ss_pred CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 345678899999999999999999999999999999999999999999999999999999998754
No 18
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.90 E-value=1.9e-09 Score=123.20 Aligned_cols=75 Identities=24% Similarity=0.296 Sum_probs=56.0
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D-~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+..+++.+++. +++.|+++|+++|..+ ..|.|||||||.+|+..+|.+|+++||+++.+|.+|.||||.||.+||
T Consensus 82 LHWAAiNNrl~--v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~ 157 (600)
T KOG0509|consen 82 LHWAAINNRLD--VARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGH 157 (600)
T ss_pred eeHHHHcCcHH--HHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCc
Confidence 34556666655 6677777788877766 567788888888888888888888888888888888888888877775
No 19
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.90 E-value=3e-09 Score=104.77 Aligned_cols=64 Identities=22% Similarity=0.086 Sum_probs=59.1
Q ss_pred HHHHHHhCCCCCCccC-CCCCcHHHHHHHcCChhhHHHHHh-cCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D-~~G~TpLHlAA~~G~~e~V~lLL~-~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+++.|+..|+++|.+| ..|.||||+||..|+.+++++|+. .|++++.+|..|+||||+|+..|+
T Consensus 75 ~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 75 KIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRD 140 (166)
T ss_pred HHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCC
Confidence 4678889999999998 589999999999999999999995 899999999999999999998875
No 20
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.86 E-value=5e-09 Score=101.08 Aligned_cols=64 Identities=17% Similarity=-0.053 Sum_probs=58.7
Q ss_pred HHHHHHhCCCCCCccC-CCCCcHHHHHHHcCChhhHHHHHh-cCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D-~~G~TpLHlAA~~G~~e~V~lLL~-~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+++.|++.|+++|.++ ..|.||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+
T Consensus 73 ~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 73 KLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHD 138 (154)
T ss_pred HHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCC
Confidence 3567888999999998 599999999999999999999998 599999999999999999998875
No 21
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.84 E-value=7.5e-09 Score=101.99 Aligned_cols=64 Identities=28% Similarity=0.245 Sum_probs=53.8
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhh---HHHHHhcCCCccccC-CCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWA---LEPTTVAGVNINFRD-VNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~---V~lLL~~GAdiN~rD-~~G~TPLH~AA~~GH 758 (758)
+++.|.+.|+.++..|..|+||||+||..|..++ +++|+.+|+++|.+| ..|+||||+||..|+
T Consensus 39 ~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~ 106 (166)
T PHA02743 39 VAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKN 106 (166)
T ss_pred HHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCC
Confidence 3445667888888889999999999999888664 789999999999998 589999999998875
No 22
>PHA02791 ankyrin-like protein; Provisional
Probab=98.83 E-value=7.6e-09 Score=111.00 Aligned_cols=64 Identities=19% Similarity=0.231 Sum_probs=46.2
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCC-cHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW-TALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~-TPLH~AA~~GH 758 (758)
+++.|+..|++++.+|..|+||||+||..|+.++|++|+.+|++++.++..|| ||||+||..|+
T Consensus 76 iV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~ 140 (284)
T PHA02791 76 IVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLND 140 (284)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCC
Confidence 45566677777777777777777777777777777777777777777777775 67777776664
No 23
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.82 E-value=3.6e-09 Score=111.14 Aligned_cols=74 Identities=24% Similarity=0.255 Sum_probs=67.1
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
++-+++++ +..+++.|+.+|+.+|..+....||||+||+.|+.++|..||...+|+|+.+..|.|||||||++|
T Consensus 38 lhwaakeg-h~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwg 111 (448)
T KOG0195|consen 38 LHWAAKEG-HVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWG 111 (448)
T ss_pred hhhhhhcc-cHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhc
Confidence 44445544 567889999999999999999999999999999999999999999999999999999999999998
No 24
>PHA03095 ankyrin-like protein; Provisional
Probab=98.82 E-value=8.3e-09 Score=115.87 Aligned_cols=65 Identities=25% Similarity=0.207 Sum_probs=61.3
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.++..+++.|+++|.+|..|+||||+||..|+.++|++||.+||++|.+|.+|+||||+|+..||
T Consensus 238 ~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~ 302 (471)
T PHA03095 238 SLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNN 302 (471)
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCC
Confidence 45667888999999999999999999999999999999999999999999999999999999875
No 25
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.80 E-value=1.8e-08 Score=119.63 Aligned_cols=64 Identities=27% Similarity=0.221 Sum_probs=61.5
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+++.|++.|+++|.+|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..|+
T Consensus 97 ~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 97 GARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 5778899999999999999999999999999999999999999999999999999999999885
No 26
>PHA02741 hypothetical protein; Provisional
Probab=98.80 E-value=1.6e-08 Score=99.63 Aligned_cols=65 Identities=17% Similarity=0.141 Sum_probs=59.5
Q ss_pred HHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHh-cCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTV-AGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~-~G~TpLHlAA~~G~~e~V~lLL~-~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-+++.|+..|+++|.++. .|+||||+|+..|+.+++++|+. .|++++.+|..|+||||+|+..|+
T Consensus 78 ~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 78 EIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNED 144 (169)
T ss_pred HHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCC
Confidence 356778889999999985 99999999999999999999997 599999999999999999998774
No 27
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.80 E-value=1.3e-08 Score=112.98 Aligned_cols=63 Identities=21% Similarity=0.193 Sum_probs=33.5
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
+++.|++.|++++..+..|+||||+||..|..+++++|+++|++++.+|..|+||||+|+..|
T Consensus 117 iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g 179 (413)
T PHA02875 117 IMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKG 179 (413)
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcC
Confidence 344455555555555555555555555555555555555555555555555555555555544
No 28
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.79 E-value=1.8e-08 Score=109.01 Aligned_cols=63 Identities=16% Similarity=0.037 Sum_probs=52.8
Q ss_pred HHHHHHhCCCCCCcc-CCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 695 LVQKAAEGGKGPCVL-DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~-D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
+++.|++.|+++|.. +..|.||||+|+..|+.+++++|+.+||+++.+|..|+||||+|+..+
T Consensus 85 ivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~ 148 (300)
T PHA02884 85 AAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMIC 148 (300)
T ss_pred HHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhC
Confidence 567788888888875 457888888888888888888888888888888888888888888754
No 29
>PHA02741 hypothetical protein; Provisional
Probab=98.77 E-value=1.8e-08 Score=99.35 Aligned_cols=57 Identities=28% Similarity=0.256 Sum_probs=52.4
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCC----hhhHHHHHhcCCCccccCC-CCCcHHHHHHHcCC
Q 004380 702 GGKGPCVLDHCGQGVLHFAAALGY----DWALEPTTVAGVNINFRDV-NGWTALHWAAYCGR 758 (758)
Q Consensus 702 ~Gad~N~~D~~G~TpLHlAA~~G~----~e~V~lLL~~GAdiN~rD~-~G~TPLH~AA~~GH 758 (758)
.|++++.+|..|+||||+||..|+ .+++++|+.+|+++|.+|. .|+||||+|+..|+
T Consensus 49 ~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~ 110 (169)
T PHA02741 49 HAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRD 110 (169)
T ss_pred hhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCC
Confidence 467899999999999999999999 5889999999999999985 99999999998875
No 30
>PHA02791 ankyrin-like protein; Provisional
Probab=98.75 E-value=1.5e-08 Score=108.81 Aligned_cols=73 Identities=25% Similarity=0.191 Sum_probs=62.0
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
|+.+++.+. ..+++.|++.|++++..+ |+||||+||..|+.++|++|+.+|++++.+|..|+||||+||..|+
T Consensus 34 Lh~Aa~~g~-~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~ 106 (284)
T PHA02791 34 LYYAIADNN-VRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGN 106 (284)
T ss_pred HHHHHHcCC-HHHHHHHHHCcCCCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 444444432 346678899999988764 7899999999999999999999999999999999999999999885
No 31
>PHA02730 ankyrin-like protein; Provisional
Probab=98.72 E-value=1.8e-08 Score=118.58 Aligned_cols=62 Identities=18% Similarity=0.078 Sum_probs=40.6
Q ss_pred HHHHHhCCCCCC-ccCCCCCcHHHHHHHcC---ChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 696 VQKAAEGGKGPC-VLDHCGQGVLHFAAALG---YDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 696 v~~Lle~Gad~N-~~D~~G~TpLHlAA~~G---~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
.+++++..+++| .+|..|+||||+|+..| +.++|++||++||+++++|..|+||||+||..|
T Consensus 23 ~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~ 88 (672)
T PHA02730 23 IKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRK 88 (672)
T ss_pred HHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcC
Confidence 334445555666 56666777777777665 367777777777777777777777777776644
No 32
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.70 E-value=2.1e-08 Score=122.56 Aligned_cols=65 Identities=32% Similarity=0.300 Sum_probs=47.2
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-+++.|+++|++++.+|+.|+||||.||..|+.+++++|+++||++|+.|.+|.||||.|++.|+
T Consensus 554 ~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~ 618 (1143)
T KOG4177|consen 554 DLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGY 618 (1143)
T ss_pred hHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcc
Confidence 35667777777777777777777777777777777777777777777777777777777777664
No 33
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.69 E-value=4.2e-08 Score=106.11 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=65.1
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCcc----CCCCCcHHHHHHHcCChhhHHHHHhcCCCcccc-CCCCCcHHHHHHHc
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVL----DHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAAYC 756 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~----D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~r-D~~G~TPLH~AA~~ 756 (758)
+++.+++.+. .-+++.|++.|+++|.+ +..|.||||+||..|..+++++|+++||++|.+ +..|+||||+|+..
T Consensus 36 lL~~A~~~~~-~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~ 114 (300)
T PHA02884 36 ILYSSIKFHY-TDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLH 114 (300)
T ss_pred HHHHHHHcCC-HHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHc
Confidence 5666666443 23677899999999987 468999999999999999999999999999997 56899999999988
Q ss_pred CC
Q 004380 757 GR 758 (758)
Q Consensus 757 GH 758 (758)
|+
T Consensus 115 ~~ 116 (300)
T PHA02884 115 GC 116 (300)
T ss_pred CC
Confidence 75
No 34
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.69 E-value=2.7e-08 Score=113.00 Aligned_cols=74 Identities=19% Similarity=0.087 Sum_probs=64.1
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHc
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~ 756 (758)
.|+.++..+. ..+++.|++.|+++|..|..|+||||+|+..|+.+++++|++.|+++|.+|..|+||||+|+..
T Consensus 171 pLh~A~~~~~-~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~ 244 (477)
T PHA02878 171 ALHYATENKD-QRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGY 244 (477)
T ss_pred HHHHHHhCCC-HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 3454555443 3467789999999999999999999999999999999999999999999999999999999965
No 35
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.69 E-value=4.4e-08 Score=100.14 Aligned_cols=65 Identities=12% Similarity=0.123 Sum_probs=58.4
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHH-HHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 693 VWLVQKAAEGGKGPCVLDHCGQGVLHF-AAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~~D~~G~TpLHl-AA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
.-+++.|++.|++++.+|..|.||||. |+..|+.+++++|+++|++++.+|..|+||||+|+..+
T Consensus 138 ~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 138 INVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFRN 203 (209)
T ss_pred HHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence 346778899999999999999999995 56678999999999999999999999999999999754
No 36
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.68 E-value=2.4e-08 Score=114.06 Aligned_cols=59 Identities=20% Similarity=0.017 Sum_probs=55.8
Q ss_pred HhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 700 AEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 700 le~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+..|+++|.+|..|+||||+||..|+.++|++||++||++|.+|..|+||||+|+..|+
T Consensus 243 l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~ 301 (494)
T PHA02989 243 ILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGN 301 (494)
T ss_pred HHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 34579999999999999999999999999999999999999999999999999999875
No 37
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.68 E-value=5.8e-08 Score=109.51 Aligned_cols=66 Identities=23% Similarity=0.100 Sum_probs=62.2
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
..+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+++||++|.+|..|.||||+|+..|+
T Consensus 230 ~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~ 295 (480)
T PHA03100 230 LEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNN 295 (480)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCC
Confidence 446788999999999999999999999999999999999999999999999999999999998774
No 38
>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.67 E-value=9.2e-08 Score=84.61 Aligned_cols=85 Identities=22% Similarity=0.235 Sum_probs=66.5
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCCC-CCcceeEEEEeCCCc-
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNRL- 585 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PPh-~pG~VpLyVtcsn~~- 585 (758)
+.|+.|+|..|+..|||.|+|.|.+|.... ....|.||+.+.....+.+..+.|.+|+. .+|..++.|..++..
T Consensus 1 P~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~----~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~~~~~~~v~v~v~~~~~ 76 (90)
T cd00603 1 PVITSISPSSGPLSGGTRLTITGSNLGSGS----PRVRVTVGGVPCKVLNVSSTEIVCRTPAAATPGEGPVEVTVDGANV 76 (90)
T ss_pred CeEEEEcCCCCCCCCCeEEEEEEECCCCCC----ceEEEEECCEECcEEecCCCEEEEECCCCCCCCcEeEEEEECCccc
Confidence 479999999999999999999999998763 46899999997777677899999999996 443455555555543
Q ss_pred --ccCcceecccc
Q 004380 586 --SCSEVREFEYR 596 (758)
Q Consensus 586 --acSEVreFEYr 596 (758)
..+....|+|.
T Consensus 77 ~~~~~~~~~F~Y~ 89 (90)
T cd00603 77 SARVLSNTTFTYV 89 (90)
T ss_pred cccccCCcceEEe
Confidence 24556667774
No 39
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.67 E-value=4.6e-08 Score=109.75 Aligned_cols=62 Identities=26% Similarity=0.222 Sum_probs=35.6
Q ss_pred HHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 696 VQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 696 v~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 140 v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g 201 (434)
T PHA02874 140 IKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYG 201 (434)
T ss_pred HHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 44555555555555555555555555555555555555555555555555555555555554
No 40
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.66 E-value=1.3e-08 Score=112.75 Aligned_cols=75 Identities=25% Similarity=0.277 Sum_probs=60.7
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+..+++...+. +++.|+++|+++++.|..|+|-||+||++|+.+++++|++.|||+|.++..|.||||.||..||
T Consensus 121 LraACfDG~le--ivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~ 195 (615)
T KOG0508|consen 121 LRAACFDGHLE--IVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGS 195 (615)
T ss_pred HHHHHhcchhH--HHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhccc
Confidence 33344433333 5677888999999999999999999999999999999999999999999999999999887775
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=98.66 E-value=3.4e-08 Score=112.77 Aligned_cols=66 Identities=18% Similarity=0.092 Sum_probs=57.7
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC---ChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG---YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G---~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.-+++.|++.|+++|.+|..|+||||+|+..| ..+++++|+++||++|.+|..|+||||+|+..|+
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~ 157 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNH 157 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCC
Confidence 34677888999999999999999999999876 6789999999999999999999999999998764
No 42
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.66 E-value=2.9e-08 Score=121.34 Aligned_cols=70 Identities=26% Similarity=0.226 Sum_probs=64.5
Q ss_pred hhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 689 EKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 689 ekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
........+.++++|++++.++..|.||||.||..|+..+|++||++||+++++|+.||||||.||..||
T Consensus 516 ~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~ 585 (1143)
T KOG4177|consen 516 DEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGH 585 (1143)
T ss_pred hhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcCh
Confidence 3334556778899999999999999999999999999999999999999999999999999999999986
No 43
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.66 E-value=5e-08 Score=110.87 Aligned_cols=71 Identities=25% Similarity=0.268 Sum_probs=58.7
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc-CChhhHHHHHhcCCCccccCC-CCCcHHHHHH
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL-GYDWALEPTTVAGVNINFRDV-NGWTALHWAA 754 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~-G~~e~V~lLL~~GAdiN~rD~-~G~TPLH~AA 754 (758)
++.++..+. .-+++.|++.|++++.+|..|+||||+|+.. ++.+++++|+++|+++|.++. .|+||||+|+
T Consensus 205 Lh~A~~~~~-~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~ 277 (477)
T PHA02878 205 LHHAVKHYN-KPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSI 277 (477)
T ss_pred HHHHHHhCC-HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHHc
Confidence 444444332 3467788999999999999999999999975 688999999999999999876 8999999995
No 44
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.65 E-value=5.1e-08 Score=99.67 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=56.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHH--cCChhhHHHHHhcCCCccccCCCCCcHHHHH-HHcC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAA--LGYDWALEPTTVAGVNINFRDVNGWTALHWA-AYCG 757 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~--~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~A-A~~G 757 (758)
-+++.|++.|+++|.+|..|+||||+|+. .++.+++++|+.+|++++.+|.+|.||||.| +..|
T Consensus 104 eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~ 170 (209)
T PHA02859 104 EILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHS 170 (209)
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcC
Confidence 46778899999999999999999999876 4689999999999999999999999999964 5444
No 45
>smart00429 IPT ig-like, plexins, transcription factors.
Probab=98.65 E-value=9e-08 Score=84.57 Aligned_cols=83 Identities=25% Similarity=0.275 Sum_probs=67.1
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEE--ecCceeeecCC-C-CCcceeE-EEEeC
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIV--AGGVLRCHTSS-Q-KVGRVPF-YVTCS 582 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~--q~GvLrC~~PP-h-~pG~VpL-yVtcs 582 (758)
+.|+.|+|.+|+..|||+|+|.|.+|... ....|.|+...+++.++ .+..++|.+|+ + .++.++| .|...
T Consensus 2 P~I~~i~P~~g~~~GGt~iti~G~nf~~~-----~~~~~~~~~~~~~c~~~~~~~~~i~C~tp~~~~~~~~~~v~~v~~~ 76 (90)
T smart00429 2 PVITRISPTSGPVSGGTEITLCGKNLDSI-----SVVFVEVGVGEAPCTFLPSSSTAIVCKTPPYHTIPGSVPVREVGLR 76 (90)
T ss_pred CEEEEEccCcCcCCCCeEEEEeeecCCcc-----eEEEEEEEeCCEEeEEeCCcceEEEEECCCCCCCCCCcCeEEEEEe
Confidence 58999999999999999999999999875 45788888767777776 57899999998 4 6788888 77776
Q ss_pred CCcccCcceeccc
Q 004380 583 NRLSCSEVREFEY 595 (758)
Q Consensus 583 n~~acSEVreFEY 595 (758)
+...-++...|+|
T Consensus 77 ~~~~~~~~~~f~y 89 (90)
T smart00429 77 NGGVPSSPQPFTY 89 (90)
T ss_pred CCCccCcccCeEE
Confidence 6554444456766
No 46
>PHA02946 ankyin-like protein; Provisional
Probab=98.65 E-value=4.8e-08 Score=110.93 Aligned_cols=64 Identities=16% Similarity=0.051 Sum_probs=57.9
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcC--ChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALG--YDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G--~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.+++.|++.|++++.+|..|+||||+||..| ..+++++|+. |+++|.+|..|+||||+|+..|+
T Consensus 189 ~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~ 254 (446)
T PHA02946 189 STISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLS 254 (446)
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCC
Confidence 4567888999999999999999999999987 7789999885 99999999999999999998764
No 47
>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.63 E-value=1e-07 Score=86.13 Aligned_cols=88 Identities=17% Similarity=0.229 Sum_probs=69.0
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCcee-ee--EEEecCceeeecCCCCC--cceeEEEEeC
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEV-PA--EIVAGGVLRCHTSSQKV--GRVPFYVTCS 582 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eV-pa--ei~q~GvLrC~~PPh~p--G~VpLyVtcs 582 (758)
+.|+.|.|..||..|||+|+|.|.+|..+.+ .....|++|+.+- +. .......|+|.+||+.+ +.++|.|..+
T Consensus 1 P~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~~~~~~~~V~V~v~ 78 (94)
T cd01180 1 PVITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAGNPVFNGPVEVTVG 78 (94)
T ss_pred CeeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCCCCCcceEEEEEEC
Confidence 3799999999999999999999999988642 3457899999833 22 24567889999999743 7888888887
Q ss_pred CCc-ccCcceeccccc
Q 004380 583 NRL-SCSEVREFEYRA 597 (758)
Q Consensus 583 n~~-acSEVreFEYr~ 597 (758)
+.. .++....|+|.+
T Consensus 79 ~~~~~~~~~~~F~Y~~ 94 (94)
T cd01180 79 HGSFRTESSEGFSFVD 94 (94)
T ss_pred CceecccccCceEEeC
Confidence 753 456667888863
No 48
>PHA03095 ankyrin-like protein; Provisional
Probab=98.62 E-value=5.3e-08 Score=109.39 Aligned_cols=74 Identities=22% Similarity=0.156 Sum_probs=64.0
Q ss_pred HHHHHHHhh--hHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcC-ChhhHHHHHhcCCCccccCCCCCcHHHHHHH
Q 004380 682 LVQKLLKEK--LQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALG-YDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (758)
Q Consensus 682 LL~~llkek--l~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G-~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~ 755 (758)
.++.++... ...-+++.|++.|+++|.++..|+||||+|+..| ..+++++|+++|+++|.+|..|+||||+|+.
T Consensus 50 ~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~ 126 (471)
T PHA03095 50 PLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLS 126 (471)
T ss_pred HHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 344444433 2445778899999999999999999999999999 5999999999999999999999999999994
No 49
>PHA02798 ankyrin-like protein; Provisional
Probab=98.60 E-value=5.6e-08 Score=111.00 Aligned_cols=63 Identities=17% Similarity=0.016 Sum_probs=57.0
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++..|+ .++++|.+|..|+||||+||..|+.+++++||+.||++|.+|..|+||||+|+..|+
T Consensus 241 i~~~l~-~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~ 303 (489)
T PHA02798 241 ILDFIF-SYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENES 303 (489)
T ss_pred HHHHHH-hcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCc
Confidence 343444 469999999999999999999999999999999999999999999999999998774
No 50
>PHA02874 ankyrin repeat protein; Provisional
Probab=98.60 E-value=7.7e-08 Score=107.98 Aligned_cols=64 Identities=20% Similarity=0.206 Sum_probs=60.4
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+++.+++.|++++.++..|+||||+||..|+.++|++|+++|+++|.+|..|.||||+|+..|+
T Consensus 106 ~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~ 169 (434)
T PHA02874 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNF 169 (434)
T ss_pred HHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCc
Confidence 4567888999999999999999999999999999999999999999999999999999999874
No 51
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.58 E-value=1.2e-07 Score=112.62 Aligned_cols=75 Identities=16% Similarity=0.238 Sum_probs=66.0
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+...+..+ ...+++.|++.|+++|.+|..|+||||+||..|+.++|++|+++||+++.++..|.||||+|+..|+
T Consensus 149 l~~~i~~~-~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~ 223 (682)
T PHA02876 149 IKERIQQD-ELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKN 223 (682)
T ss_pred HHHHHHCC-cHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCC
Confidence 33334333 3457889999999999999999999999999999999999999999999999999999999998875
No 52
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.57 E-value=5.8e-08 Score=105.08 Aligned_cols=76 Identities=25% Similarity=0.253 Sum_probs=65.1
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhc-CCCccccCCCCCcHHHHHHHcCC
Q 004380 681 KLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 681 ~LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~-GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.|+.++-..+ .-+++.|+..|+++|++|.+|-|+|+.||..||.++|++||.. ++|+...|.+|-|||++|-..||
T Consensus 343 ALMLAVSHGr--~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 343 ALMLAVSHGR--VDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred hhhhhhhcCc--HHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 3444444444 4478899999999999999999999999999999999999986 78999999999999999998887
No 53
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.57 E-value=1.6e-07 Score=106.16 Aligned_cols=163 Identities=21% Similarity=0.169 Sum_probs=100.6
Q ss_pred eeEEEEeCC-----CcccCcceecccccCCCCCcccccccCCcchhhhhhhhhhhcccCCCCCCCCCCCChhHHHHHHHH
Q 004380 575 VPFYVTCSN-----RLSCSEVREFEYRASHIPDVDVADNCGDITSENLRMQFGKLLCLTSVSTPNYDPSNLSDISQLNSK 649 (758)
Q Consensus 575 VpLyVtcsn-----~~acSEVreFEYr~~~~~~~~a~d~~~~~~e~~LqmRl~kLL~~~~~~~s~~~~s~~~ek~ql~~k 649 (758)
|-+||.|++ +...|.||..|..+.+...... +....+++.-.|.-. ...+...+ ...+...++...+..
T Consensus 533 ~l~cieCsgihr~lgt~lSrvr~LeLDdWPvEl~~V--m~aiGN~~AN~vWE~--~~~G~~KP--s~~s~REEkErwIr~ 606 (749)
T KOG0705|consen 533 VLMCIECSGIHRNLGTHLSRVRSLELDDWPVELLKV--MSAIGNDLANSVWEG--SSQGQTKP--SPDSSREEKERWIRA 606 (749)
T ss_pred eEEEEEchhhhhhhhhhhhhhhccccccCcHHHHHH--HHHhhhhHHHHHhhh--hccCCcCC--CccccHHHHHHHHHH
Confidence 456899987 4557899999998875443222 222233333333322 11222222 122233344333322
Q ss_pred HhhhccCCCcchhHHHHhhhhc-CCChhHHHHHHHHHHHHhhhHHHHHHHHHhCCCC--CC--ccCCCCCcHHHHHHHcC
Q 004380 650 ISSLLKDENDDWDLMLKLTAEE-KFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKG--PC--VLDHCGQGVLHFAAALG 724 (758)
Q Consensus 650 I~sLl~~d~~~w~~Lik~~~~~-~~s~~~~~d~LL~~llkekl~e~Lv~~Lle~Gad--~N--~~D~~G~TpLHlAA~~G 724 (758)
.+.-|.+... ..+......+|+.+...+.+...+ .|+.+|.. +| +.+.+|+|+||+||..|
T Consensus 607 ------------KYeqklFLaPl~~te~~lgqqLl~A~~~~Dl~t~~--lLLAhg~~~e~~~t~~~~~grt~LHLa~~~g 672 (749)
T KOG0705|consen 607 ------------KYEQKLFLAPLPCTEEPLGQQLLRAVAAEDLQTAI--LLLAHGSREEVNETCGEGDGRTALHLAARKG 672 (749)
T ss_pred ------------HHHHHhhcCCCCCCCCchHHHHHHHHHHHHHHHHH--HHHhccCchhhhccccCCCCcchhhhhhhhc
Confidence 0111221111 112233456788888887776544 46666643 33 25678899999999999
Q ss_pred ChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 725 YDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 725 ~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
+..+.++|+++|+|+-++|.+|+|||.||-..|
T Consensus 673 nVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 673 NVVLAQLLIWYGVDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred chhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence 999999999999999999999999999998765
No 54
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.55 E-value=1.7e-07 Score=104.05 Aligned_cols=64 Identities=23% Similarity=0.087 Sum_probs=41.3
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc-ccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN-FRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN-~rD~~G~TPLH~AA~~GH 758 (758)
+++.|++.|++++..+..|.||||+|+..|+.++|+.|+..|+.++ ..+..|+||||+||..|+
T Consensus 50 ~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~ 114 (413)
T PHA02875 50 AIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKK 114 (413)
T ss_pred HHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCC
Confidence 4556666666666666666666666666666666666666666553 345567777777776654
No 55
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.54 E-value=7.3e-08 Score=95.51 Aligned_cols=74 Identities=18% Similarity=0.041 Sum_probs=64.6
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHc
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~ 756 (758)
.|+.+..++. .-|++.|+..|++++.+...|+||||-||.-.+.+++.+||.+||+||+....-+||||.||-+
T Consensus 100 pLHRAaYn~h-~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~ 173 (228)
T KOG0512|consen 100 PLHRAAYNGH-LDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGN 173 (228)
T ss_pred HHHHHHhcCc-hHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcc
Confidence 3555555443 3467788889999999999999999999999999999999999999999999999999999964
No 56
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.53 E-value=1.7e-07 Score=91.59 Aligned_cols=62 Identities=34% Similarity=0.353 Sum_probs=43.1
Q ss_pred HHHHhCCCCCCccCCCCCcHHHHHHHcCC-----hhhHHHHHhcCC---CccccCCCCCcHHHHHHHcCC
Q 004380 697 QKAAEGGKGPCVLDHCGQGVLHFAAALGY-----DWALEPTTVAGV---NINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 697 ~~Lle~Gad~N~~D~~G~TpLHlAA~~G~-----~e~V~lLL~~GA---diN~rD~~G~TPLH~AA~~GH 758 (758)
..++..|++++.++..|.||||+|+..|+ .++++.||+.|+ ..+.+|..|+||||||+..|+
T Consensus 90 ~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~ 159 (235)
T COG0666 90 KLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGD 159 (235)
T ss_pred HHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCc
Confidence 45666677777777777777777777777 677777777777 444557777777777776664
No 57
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.53 E-value=1.2e-07 Score=113.37 Aligned_cols=62 Identities=13% Similarity=0.076 Sum_probs=56.8
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCCh--hhHHHHHhcCCCccccCCCCCcHHHHHHH
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYD--WALEPTTVAGVNINFRDVNGWTALHWAAY 755 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~--e~V~lLL~~GAdiN~rD~~G~TPLH~AA~ 755 (758)
.+++.|++.|+++|.+|..|.||||+||..|+. ++|++||++||++|.+|..|+||||+|+.
T Consensus 193 eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~ 256 (764)
T PHA02716 193 DILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYII 256 (764)
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 477889999999999999999999999999964 89999999999999999999999999863
No 58
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.52 E-value=2e-07 Score=105.21 Aligned_cols=63 Identities=24% Similarity=0.216 Sum_probs=35.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCC------CcHHHHHHHcC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNG------WTALHWAAYCG 757 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G------~TPLH~AA~~G 757 (758)
+++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..| .||||+|+..|
T Consensus 158 iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~ 226 (480)
T PHA03100 158 ILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYN 226 (480)
T ss_pred HHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhC
Confidence 3445555555555555555555555555555555555555555555555555 55555555544
No 59
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.51 E-value=1.9e-07 Score=113.55 Aligned_cols=75 Identities=19% Similarity=0.045 Sum_probs=60.4
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHc-------------------------------CChhhHHH
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAAL-------------------------------GYDWALEP 731 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~-------------------------------G~~e~V~l 731 (758)
|+.++..+ ...+++.|++.|+++|.+|..|.||||+||.. |+.++++.
T Consensus 562 Lh~Aa~~g-~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~ 640 (823)
T PLN03192 562 LHIAASKG-YEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKE 640 (823)
T ss_pred HHHHHHcC-hHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHH
Confidence 44444433 45577889999999999999999998865554 45556677
Q ss_pred HHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 732 TTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 732 LL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
|+++|+++|.+|.+|+||||+|+..||
T Consensus 641 Ll~~Gadin~~d~~G~TpLh~A~~~g~ 667 (823)
T PLN03192 641 LLKQGLNVDSEDHQGATALQVAMAEDH 667 (823)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 889999999999999999999999886
No 60
>PHA02917 ankyrin-like protein; Provisional
Probab=98.49 E-value=2e-07 Score=110.73 Aligned_cols=70 Identities=19% Similarity=0.084 Sum_probs=58.6
Q ss_pred hhhHHHHHHHHHhCCCCCCccCC---CC-----------CcHHHHHHH-----------cCChhhHHHHHhcCCCccccC
Q 004380 689 EKLQVWLVQKAAEGGKGPCVLDH---CG-----------QGVLHFAAA-----------LGYDWALEPTTVAGVNINFRD 743 (758)
Q Consensus 689 ekl~e~Lv~~Lle~Gad~N~~D~---~G-----------~TpLHlAA~-----------~G~~e~V~lLL~~GAdiN~rD 743 (758)
.....-+++.|++.|+++|..|. .| .||||+|+. .|+.++|++|+++||++|.+|
T Consensus 147 ~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d 226 (661)
T PHA02917 147 DDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSID 226 (661)
T ss_pred cCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCC
Confidence 33345578889999999986653 34 599999986 468899999999999999999
Q ss_pred CCCCcHHHHHHHcCC
Q 004380 744 VNGWTALHWAAYCGR 758 (758)
Q Consensus 744 ~~G~TPLH~AA~~GH 758 (758)
.+|+||||+|+..||
T Consensus 227 ~~G~TpLh~A~~~g~ 241 (661)
T PHA02917 227 KNYCTALQYYIKSSH 241 (661)
T ss_pred CCCCcHHHHHHHcCC
Confidence 999999999999885
No 61
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.49 E-value=1.3e-07 Score=112.96 Aligned_cols=59 Identities=20% Similarity=0.097 Sum_probs=53.2
Q ss_pred HhCCCCCCccCCCCCcHHHHHHHcCChhh-----HHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 700 AEGGKGPCVLDHCGQGVLHFAAALGYDWA-----LEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 700 le~Gad~N~~D~~G~TpLHlAA~~G~~e~-----V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+..+.++|..|..|+||||+||..|+..+ +++||+.||++|.+|.+|+||||+|+.+||
T Consensus 484 ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~ 547 (764)
T PHA02716 484 IIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNR 547 (764)
T ss_pred HHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCC
Confidence 34567889999999999999999998754 499999999999999999999999999885
No 62
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.48 E-value=2.2e-07 Score=106.24 Aligned_cols=63 Identities=16% Similarity=0.074 Sum_probs=41.4
Q ss_pred HHHHHHhCCCCC-CccCCCCCcHHHHHHHc--CChhhHHHHHhcCCCccc-cCCCCCcHHHHHHHcC
Q 004380 695 LVQKAAEGGKGP-CVLDHCGQGVLHFAAAL--GYDWALEPTTVAGVNINF-RDVNGWTALHWAAYCG 757 (758)
Q Consensus 695 Lv~~Lle~Gad~-N~~D~~G~TpLHlAA~~--G~~e~V~lLL~~GAdiN~-rD~~G~TPLH~AA~~G 757 (758)
+++.|++.|+++ +..|..|+||||+|+.. ++.++|++|+++||+++. .+..|.||||+|+..+
T Consensus 126 iv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~ 192 (494)
T PHA02989 126 MLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRND 192 (494)
T ss_pred HHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcc
Confidence 556666677777 56666777777766543 456677777777777766 4666777777766543
No 63
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.47 E-value=2.3e-07 Score=97.89 Aligned_cols=102 Identities=22% Similarity=0.134 Sum_probs=77.4
Q ss_pred cCCCcchhHHHHhhhhcCCChhHHHHHHHHHHHHhhhHHHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHcCChhhHHHHH
Q 004380 655 KDENDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGPCV-LDHCGQGVLHFAAALGYDWALEPTT 733 (758)
Q Consensus 655 ~~d~~~w~~Lik~~~~~~~s~~~~~d~LL~~llkekl~e~Lv~~Lle~Gad~N~-~D~~G~TpLHlAA~~G~~e~V~lLL 733 (758)
++|......|++....-....+..-..+.+++.+.++. ++++|++.|+++|. ++..+.||||+||..|+.++.++|+
T Consensus 22 Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~--~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrlll 99 (396)
T KOG1710|consen 22 KNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLT--LVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLL 99 (396)
T ss_pred cCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHH--HHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHH
Confidence 44445555666554422222223345677888888766 78888999999886 5678899999999999999999999
Q ss_pred hcCCCccccCCCCCcHHHHHHHcCC
Q 004380 734 VAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 734 ~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++||.+...+.-|+||-.+||+-||
T Consensus 100 daGa~~~~vNsvgrTAaqmAAFVG~ 124 (396)
T KOG1710|consen 100 DAGARMYLVNSVGRTAAQMAAFVGH 124 (396)
T ss_pred hccCccccccchhhhHHHHHHHhcc
Confidence 9999999999999999999998886
No 64
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.46 E-value=3.3e-07 Score=103.30 Aligned_cols=57 Identities=37% Similarity=0.486 Sum_probs=54.3
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 702 ~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.|...++.+..|.|.||.|+++||.++.++||.+|.+++.+|.+||||||.||.+|+
T Consensus 187 ~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~ 243 (527)
T KOG0505|consen 187 AGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQ 243 (527)
T ss_pred ccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhh
Confidence 688888888889999999999999999999999999999999999999999999985
No 65
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.44 E-value=4.2e-07 Score=95.98 Aligned_cols=79 Identities=24% Similarity=0.177 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccc-cCCCCCcHHHHHHHc
Q 004380 678 VKEKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINF-RDVNGWTALHWAAYC 756 (758)
Q Consensus 678 ~~d~LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~-rD~~G~TPLH~AA~~ 756 (758)
.+.++++.+-|+.....+ .|+..--++|.+|..|+++|..||+.|+.++|++||+.|||||. ++-.++||||+||..
T Consensus 12 ~~~~Lle~i~Kndt~~a~--~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS 89 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAAL--ALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS 89 (396)
T ss_pred hhhHHHHHHccCcHHHHH--HHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence 455677777666655443 24444445999999999999999999999999999999999997 588999999999998
Q ss_pred CC
Q 004380 757 GR 758 (758)
Q Consensus 757 GH 758 (758)
|.
T Consensus 90 Gn 91 (396)
T KOG1710|consen 90 GN 91 (396)
T ss_pred CC
Confidence 74
No 66
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.43 E-value=4.3e-07 Score=107.85 Aligned_cols=65 Identities=22% Similarity=0.183 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC-hhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGY-DWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~-~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
..+++.|++.|++++..+..|.||||+|+..+. ..++++|+++|+++|.+|..|+||||+||..|
T Consensus 388 ~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 388 VVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred HHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence 346677888888888888888888888877655 45688888889999999999999999998765
No 67
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.43 E-value=3.4e-07 Score=99.22 Aligned_cols=63 Identities=25% Similarity=0.265 Sum_probs=55.2
Q ss_pred HHHHHHhCCCCCCcc-CCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVL-DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~-D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+++.|... .+||.+ ...|||+|++|+..|..++|+.||..|||||.+|-+|-||||+||.+||
T Consensus 322 vV~~LF~m-gnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGh 385 (452)
T KOG0514|consen 322 VVERLFKM-GDVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGH 385 (452)
T ss_pred HHHHHHhc-cCcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhCh
Confidence 34444443 378885 4679999999999999999999999999999999999999999999998
No 68
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.40 E-value=4.4e-07 Score=79.19 Aligned_cols=61 Identities=21% Similarity=0.247 Sum_probs=49.6
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD 743 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD 743 (758)
.++.++..+ ...+++.|++.|++++.+|..|+||||+|+..|+.+++++|+++|+++|.+|
T Consensus 29 ~l~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 29 ALHYAAENG-NLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHTT-THHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred HHHHHHHcC-CHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 344444433 3457789999999999999999999999999999999999999999999886
No 69
>PHA02730 ankyrin-like protein; Provisional
Probab=98.37 E-value=5e-07 Score=106.54 Aligned_cols=62 Identities=13% Similarity=0.027 Sum_probs=58.6
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCC-CCCcHHHHHHHc
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYC 756 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~-~G~TPLH~AA~~ 756 (758)
+++.|+..|+++|.+|..|+||||+||..++.+++++|+.+||++|.+|. .|+||||+|+..
T Consensus 444 ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~ 506 (672)
T PHA02730 444 VFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYR 506 (672)
T ss_pred HHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHh
Confidence 57789999999999999999999999999999999999999999999997 599999999863
No 70
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.36 E-value=3e-07 Score=88.74 Aligned_cols=52 Identities=25% Similarity=0.261 Sum_probs=46.5
Q ss_pred CccCCCCCcHHHHHHHcCChh---hHHHHHhcCCCccccC-CCCCcHHHHHHHcCC
Q 004380 707 CVLDHCGQGVLHFAAALGYDW---ALEPTTVAGVNINFRD-VNGWTALHWAAYCGR 758 (758)
Q Consensus 707 N~~D~~G~TpLHlAA~~G~~e---~V~lLL~~GAdiN~rD-~~G~TPLH~AA~~GH 758 (758)
+..|..|+||||+||..|..+ ++++|+..|+++|.+| ..|+||||+|+..|+
T Consensus 49 ~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~ 104 (154)
T PHA02736 49 LEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQN 104 (154)
T ss_pred HHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCC
Confidence 346899999999999999874 6889999999999998 599999999999875
No 71
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.35 E-value=2.9e-07 Score=103.75 Aligned_cols=72 Identities=29% Similarity=0.299 Sum_probs=63.2
Q ss_pred HHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 686 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 686 llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++.....+- ++.++..|+++|..+.+|.|+||-||.-.+.++|++|+++|++||..|..||||||-||.+||
T Consensus 47 A~~~~d~~e-v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~ 118 (527)
T KOG0505|consen 47 ACSRGDLEE-VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGY 118 (527)
T ss_pred ccccccHHH-HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccccc
Confidence 333333333 457788889999999999999999999999999999999999999999999999999999997
No 72
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.34 E-value=5.9e-07 Score=87.74 Aligned_cols=66 Identities=33% Similarity=0.269 Sum_probs=60.2
Q ss_pred HHHHHHHHhCCC---CCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 693 VWLVQKAAEGGK---GPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 693 e~Lv~~Lle~Ga---d~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
..+++.|++.|+ ..+.+|..|+||||+|+..|+..++++|+..|++++.++..|+||||+|+..|+
T Consensus 124 ~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~ 192 (235)
T COG0666 124 IEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGR 192 (235)
T ss_pred HHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccch
Confidence 346788999999 566679999999999999999999999999999999999999999999998875
No 73
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.34 E-value=5.5e-07 Score=81.33 Aligned_cols=56 Identities=32% Similarity=0.306 Sum_probs=40.8
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 702 ~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.|.++|.. ..|++|||+||-.|...++++|+..||+|+.+|+.|-|||--|+..||
T Consensus 24 ~g~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 24 EGLNVNEI-YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred ccccHHHH-hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhh
Confidence 34555532 367778888777777777777777788887777778888777777766
No 74
>PHA02917 ankyrin-like protein; Provisional
Probab=98.33 E-value=8.4e-07 Score=105.52 Aligned_cols=61 Identities=21% Similarity=0.233 Sum_probs=58.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHH
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~ 755 (758)
+++.|+..|+++|.+|..|+||||+|+..+..+++++|+.+|+++|.+|..|+||||+|+.
T Consensus 434 ~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 434 TINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAIN 494 (661)
T ss_pred HHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999995
No 75
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.33 E-value=5.7e-07 Score=65.55 Aligned_cols=33 Identities=33% Similarity=0.341 Sum_probs=31.4
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhcCCCccccCC
Q 004380 712 CGQGVLHFAAALGYDWALEPTTVAGVNINFRDV 744 (758)
Q Consensus 712 ~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~ 744 (758)
+|+||||+||..|+.++|++||.+|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999999874
No 76
>PHA02792 ankyrin-like protein; Provisional
Probab=98.32 E-value=7.9e-07 Score=104.08 Aligned_cols=61 Identities=15% Similarity=0.097 Sum_probs=57.5
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHH
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~ 755 (758)
+++.++..|+++|.+|..|.||||+|+..++.+++++|+.+||++|.+|..|.||||+|+.
T Consensus 392 IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 392 ILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred HHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999975
No 77
>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.
Probab=98.30 E-value=1.8e-06 Score=78.99 Aligned_cols=73 Identities=19% Similarity=0.410 Sum_probs=58.8
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc-eeeeEEEecCceeeecCCCC-------CcceeEEE
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEIVAGGVLRCHTSSQK-------VGRVPFYV 579 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~-eVpaei~q~GvLrC~~PPh~-------pG~VpLyV 579 (758)
++|++|.|.|+|.+|||.|+|+|.+|..++. ....++||+. .++..+..+..++|.+|+.. ++..++.+
T Consensus 1 P~I~~i~P~~g~~SGGt~itV~G~~Lds~q~---p~~~V~~~~~~~~~C~v~s~~~i~C~tP~~~~~~~~~~~~~~~~~~ 77 (99)
T cd01181 1 PTITRIEPEWSFLSGGTPITVTGTNLNTVQE---PRIRVKYGGVEKTSCKVRNSTLMTCPAPSLALLNRSPEPGERPVEF 77 (99)
T ss_pred CEEEEeccCCCccCCCEEEEEEeeccCcccc---cEEEEEECCceeccceeCCCCEEEeCCCCCcccccccCCCCcCeEE
Confidence 4799999999999999999999999998743 5788999996 34666677889999999852 36666666
Q ss_pred EeCC
Q 004380 580 TCSN 583 (758)
Q Consensus 580 tcsn 583 (758)
..+.
T Consensus 78 ~fd~ 81 (99)
T cd01181 78 GLDG 81 (99)
T ss_pred EEec
Confidence 6554
No 78
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.29 E-value=3e-07 Score=94.05 Aligned_cols=68 Identities=18% Similarity=0.093 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 690 kl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
+.+.-++++|+.++.++|..|-+|-|||-+|+.-||.++|+.||..||+++.-|..|+++|..|+.-|
T Consensus 203 ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValG 270 (296)
T KOG0502|consen 203 GGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALG 270 (296)
T ss_pred CChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhh
Confidence 44555777888888888888888888888888888888888888888888888888888888887765
No 79
>cd02849 CGTase_C_term Cgtase (cyclodextrin glycosyltransferase) C-terminus domain. Enzymes such as amylases, cyclomaltodextrinase (CDase), and CGTase degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues present in starch. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs) (consisting of six, seven, or eight glucoses, respectively). CGTases are characterized as depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and which are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The C-terminus of CGTase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These d
Probab=98.28 E-value=4.3e-06 Score=73.91 Aligned_cols=79 Identities=16% Similarity=0.091 Sum_probs=67.0
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCCCCCcceeEEEEeCCCccc
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSC 587 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PPh~pG~VpLyVtcsn~~ac 587 (758)
+.|..|+|.-|.. |++|+|.|++|... .-.|+||+.+++...|.+..+.|.+|.+.+|..+|.|+..++. -
T Consensus 3 P~I~~i~P~~g~~--G~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~vP~~~aG~~~V~V~~~~G~-~ 73 (81)
T cd02849 3 PLIGHVGPMMGKA--GNTVTISGEGFGSA------PGTVYFGTTAATVISWSDTRIVVTVPNVPAGNYDVTVKTADGA-T 73 (81)
T ss_pred CEEeeEcCCCCCC--CCEEEEEEECCCCC------CcEEEECCEEeEEEEECCCEEEEEeCCCCCceEEEEEEeCCCc-c
Confidence 5799999999986 88999999999853 2469999999999899999999999999999999999977554 2
Q ss_pred Ccceeccc
Q 004380 588 SEVREFEY 595 (758)
Q Consensus 588 SEVreFEY 595 (758)
|....|+|
T Consensus 74 Sn~~~f~~ 81 (81)
T cd02849 74 SNGYNFEV 81 (81)
T ss_pred cCcEeeEC
Confidence 55555654
No 80
>PF13606 Ank_3: Ankyrin repeat
Probab=98.27 E-value=7.8e-07 Score=64.10 Aligned_cols=30 Identities=27% Similarity=0.245 Sum_probs=28.5
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhcCCCccc
Q 004380 712 CGQGVLHFAAALGYDWALEPTTVAGVNINF 741 (758)
Q Consensus 712 ~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~ 741 (758)
+|+||||+||..|+.++|++||++|+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 589999999999999999999999999984
No 81
>PHA02792 ankyrin-like protein; Provisional
Probab=98.25 E-value=2e-06 Score=100.78 Aligned_cols=65 Identities=15% Similarity=-0.052 Sum_probs=56.2
Q ss_pred HHHHHHHhCCCCCCccCCCC--CcHHHHHHHcCChh---hHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDHCG--QGVLHFAAALGYDW---ALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G--~TpLHlAA~~G~~e---~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-+++.|++.|+++|.+|..| .||||+|+...... ++++|+.+||++|.+|..|+||||+|+..|+
T Consensus 353 eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n 422 (631)
T PHA02792 353 KVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHS 422 (631)
T ss_pred HHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCC
Confidence 37889999999999998775 69999877766543 5788999999999999999999999998764
No 82
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.23 E-value=6e-07 Score=99.95 Aligned_cols=76 Identities=25% Similarity=0.166 Sum_probs=67.1
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 680 EKLVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 680 d~LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-.++.++.|++. -+++.|++.|+++|.++..|.|+||.||..|+.+++++|+.+|+-++ +|..|-|||..|+..||
T Consensus 152 TcLmIa~ykGh~--~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~ 227 (615)
T KOG0508|consen 152 TCLMIACYKGHV--DIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGH 227 (615)
T ss_pred eeEEeeeccCch--HHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcc
Confidence 345666666554 48899999999999999999999999999999999999999999996 67779999999999886
No 83
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.22 E-value=1.4e-06 Score=102.11 Aligned_cols=64 Identities=30% Similarity=0.238 Sum_probs=54.7
Q ss_pred HHHHHHh-CCC-CCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc---ccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAE-GGK-GPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN---FRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle-~Ga-d~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN---~rD~~G~TPLH~AA~~GH 758 (758)
.++.|++ .|. ..|..|..|+||||+||..|+.+++++||..||+.+ .+|.+|.||||+||..|+
T Consensus 321 tv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 321 TVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN 389 (929)
T ss_pred HHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc
Confidence 3455665 443 478899999999999999999999999999999988 569999999999999885
No 84
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.21 E-value=1.1e-06 Score=103.10 Aligned_cols=76 Identities=24% Similarity=0.169 Sum_probs=51.3
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHh-cC-CCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTV-AG-VNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~-~G-AdiN~rD~~G~TPLH~AA~~GH 758 (758)
.++.+++++..+. +..|+..|++++.+++++.||||.||..|....|+-||+ .| ..+|..|-.|.||||.|+..||
T Consensus 276 pLH~a~r~G~~~s-vd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH 353 (929)
T KOG0510|consen 276 PLHYAARQGGPES-VDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH 353 (929)
T ss_pred hHHHHHHcCChhH-HHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH
Confidence 4666666554433 456667777777777777777777777777777777776 33 3566667777777777777665
No 85
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.16 E-value=2.4e-06 Score=102.68 Aligned_cols=74 Identities=22% Similarity=0.111 Sum_probs=62.3
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccC--------------CCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLD--------------HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGW 747 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D--------------~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~ 747 (758)
+..++.++. ..+++.|++.|++++.++ ..|.||||+||..|+.+++++|+++||++|.+|..|+
T Consensus 132 LhlAa~~~~--~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~ 209 (743)
T TIGR00870 132 LHLAAHRQN--YEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGN 209 (743)
T ss_pred HHHHHHhCC--HHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhh
Confidence 444444443 347889999999998653 3699999999999999999999999999999999999
Q ss_pred cHHHHHHHcC
Q 004380 748 TALHWAAYCG 757 (758)
Q Consensus 748 TPLH~AA~~G 757 (758)
||||+|+..+
T Consensus 210 T~Lh~A~~~~ 219 (743)
T TIGR00870 210 TLLHLLVMEN 219 (743)
T ss_pred HHHHHHHhhh
Confidence 9999999764
No 86
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.16 E-value=9e-06 Score=72.39 Aligned_cols=64 Identities=33% Similarity=0.321 Sum_probs=54.1
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
.+++.++..|+.++..+..|.||+|+|+..++.+++++|+..|.+++..|..|.||||+|...+
T Consensus 54 ~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~ 117 (126)
T cd00204 54 EIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG 117 (126)
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence 4667778888888888888889999999888888999998888888888888889999888765
No 87
>PHA02795 ankyrin-like protein; Provisional
Probab=98.16 E-value=3.4e-06 Score=95.47 Aligned_cols=66 Identities=17% Similarity=-0.052 Sum_probs=56.2
Q ss_pred HHHHHHHHhCCCCCCc-c-----CCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 693 VWLVQKAAEGGKGPCV-L-----DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~-~-----D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.-+++.|+..|++.+. . +..|.|++|.|+..++.+++++|+.+||++|.+|..|+||||+||..||
T Consensus 162 ~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~ 233 (437)
T PHA02795 162 SSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGY 233 (437)
T ss_pred HHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCC
Confidence 3467888888875332 2 2348899999999999999999999999999999999999999999886
No 88
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.00 E-value=2.9e-05 Score=69.08 Aligned_cols=65 Identities=32% Similarity=0.317 Sum_probs=59.7
Q ss_pred HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 694 WLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 694 ~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-+++.+++.++..+..+..|.||||.|+..+..+++++|+..|++++..+..|.||+|+|+..++
T Consensus 21 ~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~ 85 (126)
T cd00204 21 EVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGN 85 (126)
T ss_pred HHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCc
Confidence 35667888888888899999999999999999999999999999999999999999999998874
No 89
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.99 E-value=9.4e-06 Score=91.77 Aligned_cols=57 Identities=28% Similarity=0.312 Sum_probs=53.0
Q ss_pred CCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 702 GGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 702 ~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
....++..|..|.||||+|+.+|+...++.|+.+||++..++++||+|||-|+..|.
T Consensus 44 ~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~ 100 (560)
T KOG0522|consen 44 VSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN 100 (560)
T ss_pred hhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence 345688899999999999999999999999999999999999999999999999874
No 90
>cd00604 IPT_CGTD IPT domain (domain D) of cyclodextrin glycosyltransferase (CGTase) and similar enzymes. These enzymes are involved in the enzymatic hydrolysis of alpha-1,4 linkages of starch polymers and belong to the glycosyl hydrolase family 13. Most consist of three domains (A,B,C) but CGTase is more complex and has two additional domains (D,E). The function of the IPT/D domain is unknown.
Probab=97.98 E-value=3.2e-05 Score=68.40 Aligned_cols=80 Identities=18% Similarity=0.088 Sum_probs=67.1
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCCCCCcceeEEEEeCCCccc
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQKVGRVPFYVTCSNRLSC 587 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PPh~pG~VpLyVtcsn~~ac 587 (758)
+.|..|+|.-|. -|++|+|.|.+|.+. .-.|+||+.+++...|.+..|.|.+|.+.+|..++.|+..++. -
T Consensus 1 P~I~~i~P~~g~--pG~~VtI~G~gFg~~------~~~V~~g~~~a~v~s~sdt~I~~~VP~~~~g~~~i~V~~~~G~-~ 71 (81)
T cd00604 1 PLIGSVGPVMGK--PGNTVTISGEGFGST------GGTVYFGGTAAEVLSWSDTSIVVEVPRVAPGNYNISVTTVDGV-T 71 (81)
T ss_pred CeEeeEcCCCCC--CCCEEEEEEECCCCC------ccEEEECCEEEEEEEECCCEEEEEeCCCCCCceEEEEEECCCc-c
Confidence 368899999887 688999999999762 1369999999999899999999999999999999999975554 3
Q ss_pred Ccceecccc
Q 004380 588 SEVREFEYR 596 (758)
Q Consensus 588 SEVreFEYr 596 (758)
|.-..|+|.
T Consensus 72 Sn~~~f~~l 80 (81)
T cd00604 72 SNGYNFEVL 80 (81)
T ss_pred cCcEeEEEc
Confidence 566668874
No 91
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.97 E-value=1.7e-05 Score=88.84 Aligned_cols=76 Identities=20% Similarity=0.177 Sum_probs=63.1
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLD-HCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D-~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.|+..++....+- ..+|+..|+++|..+ +.|.||||+||..|..--+++|+-.|||+++.|.+|.||+.+|-..||
T Consensus 136 QLhasvRt~nlet-~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH 212 (669)
T KOG0818|consen 136 QLHSSVRTGNLET-CLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGH 212 (669)
T ss_pred HHHHHhhcccHHH-HHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCc
Confidence 3444444333332 336778899999866 579999999999999999999999999999999999999999999887
No 92
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.92 E-value=8.4e-06 Score=86.31 Aligned_cols=62 Identities=27% Similarity=0.327 Sum_probs=58.0
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHH
Q 004380 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753 (758)
Q Consensus 692 ~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~A 753 (758)
+.-++.+|+...+++|..++.|.||||+||.-||..+++-|+..||-++.-++.|.|||.-|
T Consensus 79 hrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 79 HRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred cHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence 45577888989999999999999999999999999999999999999999999999999876
No 93
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=97.92 E-value=3e-05 Score=93.25 Aligned_cols=49 Identities=24% Similarity=0.150 Sum_probs=44.1
Q ss_pred CCCCCcHHHHHHHcCChhhHHHHHhcCCCccccC--------------CCCCcHHHHHHHcCC
Q 004380 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRD--------------VNGWTALHWAAYCGR 758 (758)
Q Consensus 710 D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD--------------~~G~TPLH~AA~~GH 758 (758)
...|+||||+||..|+.++|++|+++||+++.++ ..|.||||+||..|+
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~ 187 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS 187 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCC
Confidence 3579999999999999999999999999999774 369999999998875
No 94
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.87 E-value=2.7e-05 Score=62.59 Aligned_cols=49 Identities=20% Similarity=0.091 Sum_probs=35.0
Q ss_pred HHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHH
Q 004380 684 QKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTT 733 (758)
Q Consensus 684 ~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL 733 (758)
+.++..+. .-+++.|++.|+++|.+|.+|+||||+||..|+.+++++||
T Consensus 6 h~A~~~g~-~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 6 HWAARSGN-LEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHTT--HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHhCC-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 33444333 33567888889999999999999999999999999999986
No 95
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=97.84 E-value=1.5e-05 Score=81.86 Aligned_cols=75 Identities=27% Similarity=0.296 Sum_probs=68.1
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++.++.+..+. +++.|++.|++++...+...++|.+|+..||.++|++||.+++|||.-|-+|-|||-||++-||
T Consensus 164 LiWAaa~G~i~--vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnh 238 (296)
T KOG0502|consen 164 LIWAAAKGHIP--VVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNH 238 (296)
T ss_pred hHHHHhcCchH--HHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCCh
Confidence 66666655544 7889999999999999999999999999999999999999999999999999999999998876
No 96
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=97.63 E-value=0.00011 Score=66.73 Aligned_cols=62 Identities=15% Similarity=0.022 Sum_probs=55.9
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHH
Q 004380 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWA 753 (758)
Q Consensus 692 ~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~A 753 (758)
+-.+++.|+..|++++.+|+.|.|||.-|..-||..+|++||..||+-..+-.+|.+.+-.+
T Consensus 46 Ql~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 46 QLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred hHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 34477888899999999999999999999999999999999999999999999998877543
No 97
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.63 E-value=2.3e-05 Score=91.64 Aligned_cols=64 Identities=19% Similarity=0.037 Sum_probs=54.2
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++++++..+..+|.....|.||||+||..|+.+++.+||.+|+|+-.+|+.+.|+|-.||.+|+
T Consensus 97 ~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr 160 (854)
T KOG0507|consen 97 IVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGR 160 (854)
T ss_pred HHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhh
Confidence 4566676777788888888888888888888888888888888888888888888888888875
No 98
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.57 E-value=2.1e-05 Score=92.25 Aligned_cols=61 Identities=20% Similarity=0.215 Sum_probs=52.4
Q ss_pred HHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHH
Q 004380 695 LVQKAAEGGKGPCVLDH-CGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAY 755 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~-~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~ 755 (758)
+++.|+.+|++++.+|+ .|+||||.|.+.|+.+++-+||.+|+.+..+|+.|..||.+-++
T Consensus 67 ~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 67 FLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred HHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 45667788999998885 59999999999999999999999999999999999999987664
No 99
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.55 E-value=0.00012 Score=86.63 Aligned_cols=75 Identities=24% Similarity=0.216 Sum_probs=65.8
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCC--ccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN--INFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAd--iN~rD~~G~TPLH~AA~~GH 758 (758)
|-.++|-+. .-+++.|+++|||++.+|..|+|+||+....-..++-..+|++|++ ...+++.|-|||..||.-|+
T Consensus 244 LSfAAC~nq--~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk 320 (782)
T KOG3676|consen 244 LSFAACTNQ--PEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGK 320 (782)
T ss_pred hHHHHHcCC--HHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhh
Confidence 445555544 4478899999999999999999999999999888899999999999 88999999999999998774
No 100
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.53 E-value=0.00016 Score=85.52 Aligned_cols=72 Identities=24% Similarity=0.191 Sum_probs=57.9
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCc--------cCCC---------------CCcHHHHHHHcCChhhHHHHHhcCCCc
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCV--------LDHC---------------GQGVLHFAAALGYDWALEPTTVAGVNI 739 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~--------~D~~---------------G~TpLHlAA~~G~~e~V~lLL~~GAdi 739 (758)
|+.++.+... .+++.|++.|||++. .+.. |..||-+||..+..+++++|+++|||+
T Consensus 188 LHiAIv~~~~-~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~ 266 (782)
T KOG3676|consen 188 LHIAIVNRDA-ELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP 266 (782)
T ss_pred HHHHHHhccH-HHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC
Confidence 4444443333 367899999999984 2222 567999999999999999999999999
Q ss_pred cccCCCCCcHHHHHHH
Q 004380 740 NFRDVNGWTALHWAAY 755 (758)
Q Consensus 740 N~rD~~G~TPLH~AA~ 755 (758)
|++|.+|.|.||.-+.
T Consensus 267 ~aqDS~GNTVLH~lVi 282 (782)
T KOG3676|consen 267 NAQDSNGNTVLHMLVI 282 (782)
T ss_pred CccccCCChHHHHHHH
Confidence 9999999999998654
No 101
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.52 E-value=5.8e-05 Score=84.43 Aligned_cols=72 Identities=25% Similarity=0.022 Sum_probs=60.7
Q ss_pred HHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhc-CCCccccCCCCCcHHHHHHHcCC
Q 004380 686 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-GVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 686 llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~-GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+.+.+....|.+ +.-.|.+++.+|.+.+|+||.||+-|+.++|++||.. +++++.+|..|+|||.-|..++|
T Consensus 513 aa~~GD~~alrR-f~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h 585 (622)
T KOG0506|consen 513 AAKNGDLSALRR-FALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH 585 (622)
T ss_pred hhhcCCHHHHHH-HHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc
Confidence 334444444444 4445789999999999999999999999999999985 89999999999999999998887
No 102
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=97.51 E-value=0.00017 Score=81.62 Aligned_cols=58 Identities=21% Similarity=-0.009 Sum_probs=50.6
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCcccc-CCCCCcHH
Q 004380 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTAL 750 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~r-D~~G~TPL 750 (758)
--|+++|++.|+++|..|.+||||||+||..++.-+++.|++.||-|-+. =.++.||.
T Consensus 596 yeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~ 654 (752)
T KOG0515|consen 596 YEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAA 654 (752)
T ss_pred hHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchh
Confidence 34788999999999999999999999999999999999999999988764 33556664
No 103
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=97.39 E-value=0.00015 Score=85.21 Aligned_cols=75 Identities=23% Similarity=0.097 Sum_probs=66.1
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
+.++++....+ ++++|++..+-++.+|..|.+|||+||..|+.++|+.||.++..+|+....|-||||.||.+||
T Consensus 53 lhha~Lng~~~--is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh 127 (854)
T KOG0507|consen 53 LHHAVLNGQNQ--ISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGH 127 (854)
T ss_pred HHHHHhcCchH--HHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcc
Confidence 33445544433 7788888888899999999999999999999999999999999999999999999999999997
No 104
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=97.32 E-value=0.0001 Score=60.16 Aligned_cols=27 Identities=41% Similarity=0.630 Sum_probs=13.7
Q ss_pred HHhcC-CCccccCCCCCcHHHHHHHcCC
Q 004380 732 TTVAG-VNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 732 LL~~G-AdiN~rD~~G~TPLH~AA~~GH 758 (758)
||++| +++|.+|..|.||||+||.+||
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~ 28 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGH 28 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCc
Confidence 67888 9999999999999999999986
No 105
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=97.24 E-value=0.00042 Score=82.91 Aligned_cols=71 Identities=20% Similarity=0.200 Sum_probs=61.1
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhc-------CCCccccCCCCCcHHHHHH
Q 004380 683 VQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA-------GVNINFRDVNGWTALHWAA 754 (758)
Q Consensus 683 L~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~-------GAdiN~rD~~G~TPLH~AA 754 (758)
|+.++..+ ...+++.|++.|+++|.+|..|.||||+|+..|+.+++++|+.+ |++++..+..|.||+..+.
T Consensus 119 Lh~Aa~~g-~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 119 LHIACANG-HVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHCC-CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 44444433 34477899999999999999999999999999999999999999 9999999999999987765
No 106
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.78 E-value=0.0015 Score=77.46 Aligned_cols=53 Identities=30% Similarity=0.439 Sum_probs=50.6
Q ss_pred CCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCC-CCCcHHHHHHHcCC
Q 004380 706 PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYCGR 758 (758)
Q Consensus 706 ~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~-~G~TPLH~AA~~GH 758 (758)
.|.+|..|+|+||+|+..|...++++||.+|++++.+|. .||||||-|.++||
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~ 98 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGN 98 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhch
Confidence 677999999999999999999999999999999999987 79999999999996
No 107
>cd00602 IPT_TF IPT domain of eukaryotic transcription factors NF-kappaB/Rel, nuclear factor of activated Tcells (NFAT), and recombination signal J-kappa binding protein (RBP-Jkappa). The IPT domains in these proteins are involved in DNA binding. Most NF-kappaB/Rel proteins form homo- and heterodimers, while NFAT proteins are largely monomeric (with TonEBP being an exception). While the majority of sequence-specific DNA binding elements are found in the N-terminal domain, several are found in the IPT domain in loops adjacent to, and including, the linker region.
Probab=96.53 E-value=0.0068 Score=56.00 Aligned_cols=82 Identities=20% Similarity=0.166 Sum_probs=66.7
Q ss_pred EEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCC-------ceeeeEEE----ecCceeeecCC-C-----C
Q 004380 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGE-------IEVPAEIV----AGGVLRCHTSS-Q-----K 571 (758)
Q Consensus 509 sI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd-------~eVpaei~----q~GvLrC~~PP-h-----~ 571 (758)
.|.+++-.-++..||-+|.++|..+.- . ..-|.|++ .|+-+.+- +...++|.+|| | .
T Consensus 2 ~I~r~s~~s~~~~GG~ev~Ll~~k~~k-~-----dikV~F~e~~~g~~~WE~~~~f~~~dv~q~aiv~~tP~y~~~~i~~ 75 (101)
T cd00602 2 PICRVSSLSGSVNGGDEVFLLCDKVNK-P-----DIKVWFGEKGPGETVWEAEAMFRQEDVRQVAIVFKTPPYHNKWITR 75 (101)
T ss_pred ceEEEeCCeeEcCCCcEEEEEecCCCC-C-----CCEEEEEecCCCCCeEEEEEEECHHHceEeEEEecCCCcCCCCccc
Confidence 588999999999999999999997754 1 26699999 67766663 66789999998 3 5
Q ss_pred CcceeEEEEeCCCcccCcceecccc
Q 004380 572 VGRVPFYVTCSNRLSCSEVREFEYR 596 (758)
Q Consensus 572 pG~VpLyVtcsn~~acSEVreFEYr 596 (758)
|=.|+|+|.-.....+|+...|+|.
T Consensus 76 pV~V~i~L~r~~~~~~S~~~~FtY~ 100 (101)
T cd00602 76 PVQVPIQLVRPDDRKRSEPLTFTYT 100 (101)
T ss_pred cEEEEEEEEeCCCCeecCCcCeEEc
Confidence 6677888877766779999999995
No 108
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=96.22 E-value=0.012 Score=72.68 Aligned_cols=91 Identities=21% Similarity=0.186 Sum_probs=77.2
Q ss_pred CCCceEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc-eeeeEEEecCc-eeeecCCC-CCcceeEEEE
Q 004380 504 QDQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEIVAGGV-LRCHTSSQ-KVGRVPFYVT 580 (758)
Q Consensus 504 q~q~fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~-eVpaei~q~Gv-LrC~~PPh-~pG~VpLyVt 580 (758)
--|.+.|..+.|.||++.|||.|+++|+.+..+ ++-.|++|+. .-+....+++. ++|.+++. .++.-|+.|.
T Consensus 139 s~~~~~~~~~~P~~Gp~~ggt~v~~~Gs~l~~g-----s~~~~vv~~~~~c~~~~~~~~~~~~c~t~~~~~~~~~~~~v~ 213 (1025)
T KOG3610|consen 139 SLQGPCFLSAEPVNGPASGGTQVHCTGSPLDTG-----SCPDCVVSGLGPCVISVVQDSAVIFCVTSSQGAGSEAPVLVS 213 (1025)
T ss_pred eecceeEEeeccCcCCCCCCcceEEeccccccC-----CCceEEecCCccceeEeecCceEEEEecCCCCCCCccceEEE
Confidence 456789999999999999999999999999876 6688999999 77777788887 99999996 5689999999
Q ss_pred eCCCcccCcceecccccCC
Q 004380 581 CSNRLSCSEVREFEYRASH 599 (758)
Q Consensus 581 csn~~acSEVreFEYr~~~ 599 (758)
.+.+..-.....|+|...+
T Consensus 214 f~~~~~~~~~~~f~y~~dp 232 (1025)
T KOG3610|consen 214 FDRTPQKLTPLAFNYTADP 232 (1025)
T ss_pred ecccccccCCCCcccccCC
Confidence 9887644446788888654
No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=95.99 E-value=0.006 Score=74.12 Aligned_cols=64 Identities=25% Similarity=0.139 Sum_probs=59.8
Q ss_pred HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHc
Q 004380 693 VWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (758)
Q Consensus 693 e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~ 756 (758)
..+.+.|++.|+++|.+|..|+||||.+...|+...+..|+++||+.++.|..|.+||++|...
T Consensus 669 ~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 669 SGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred HHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence 4467889999999999999999999999999999999999999999999999999999999653
No 110
>cd01178 IPT_NFAT IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.
Probab=95.94 E-value=0.023 Score=52.54 Aligned_cols=82 Identities=24% Similarity=0.281 Sum_probs=61.2
Q ss_pred ceEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc--------eeeeEE----EecCceeeecCC-C---
Q 004380 507 LYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI--------EVPAEI----VAGGVLRCHTSS-Q--- 570 (758)
Q Consensus 507 ~fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~--------eVpaei----~q~GvLrC~~PP-h--- 570 (758)
++.|.+.|-.-+++.||-||+++|..+... --|.|-+. |+-+++ +....|+|.+|| |
T Consensus 1 lp~I~r~s~~s~sv~GG~Ev~Ll~~k~~kD-------ikV~F~E~~~dG~~~WE~~a~f~~~~~hQ~aIvf~tPpY~~~~ 73 (101)
T cd01178 1 LPEIEKKSLNSCSVNGGEELFLTGKNFLKD-------SKVVFQEKGQDGEAQWEAEATIDKEKSHQNHLVVEVPPYHNKH 73 (101)
T ss_pred CCeeEEeccCceeecCCCEEEEEehhcCCC-------CEEEEEEeCCCCccceEEEEEeChHhceeeeEEEecCCCCCCC
Confidence 468999999999999999999999977543 23666531 344444 567899999999 3
Q ss_pred --CCcceeEEEEeCCCcccCcceecccc
Q 004380 571 --KVGRVPFYVTCSNRLSCSEVREFEYR 596 (758)
Q Consensus 571 --~pG~VpLyVtcsn~~acSEVreFEYr 596 (758)
.|=.|-|+|.... -.+|+...|+|.
T Consensus 74 I~~pV~V~~~l~~~~-~~~S~~~~FtY~ 100 (101)
T cd01178 74 VAAPVQVQFYVVNGK-RKRSQPQTFTYT 100 (101)
T ss_pred cCCceEEEEEEEcCC-CCcCCCCCcEec
Confidence 5666677775443 358999999995
No 111
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=95.93 E-value=0.0094 Score=68.29 Aligned_cols=54 Identities=28% Similarity=0.256 Sum_probs=28.7
Q ss_pred CCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCC--ccccCCCCCcHHHHHHHc
Q 004380 703 GKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVN--INFRDVNGWTALHWAAYC 756 (758)
Q Consensus 703 Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAd--iN~rD~~G~TPLH~AA~~ 756 (758)
|.++-.++.+..++||+||..|+.++|++||.+|.. ++..|.+|.|+||-||..
T Consensus 889 gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~ 944 (1004)
T KOG0782|consen 889 GGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQ 944 (1004)
T ss_pred CCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh
Confidence 334444555555555555555555555555555543 344455555555555543
No 112
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=95.92 E-value=0.0024 Score=77.60 Aligned_cols=67 Identities=22% Similarity=0.058 Sum_probs=59.7
Q ss_pred HHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCcccc-CCCCCcHHHHHHHcCC
Q 004380 692 QVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFR-DVNGWTALHWAAYCGR 758 (758)
Q Consensus 692 ~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~r-D~~G~TPLH~AA~~GH 758 (758)
++-++++|+.+|+++..+|+.|.+||.+||-.|+..+|+.|+.+.|+++++ |+.+-|+|-+||.-||
T Consensus 769 h~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr 836 (2131)
T KOG4369|consen 769 HREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGR 836 (2131)
T ss_pred cHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCc
Confidence 555678888999999999999999999999999999999999999999986 8999999999988775
No 113
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.75 E-value=0.014 Score=37.95 Aligned_cols=29 Identities=31% Similarity=0.281 Sum_probs=26.6
Q ss_pred CCCcHHHHHHHcCChhhHHHHHhcCCCcc
Q 004380 712 CGQGVLHFAAALGYDWALEPTTVAGVNIN 740 (758)
Q Consensus 712 ~G~TpLHlAA~~G~~e~V~lLL~~GAdiN 740 (758)
.|.|+||+|+..|..++++.|+.+|++++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 47899999999999999999999998775
No 114
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.44 E-value=0.0051 Score=74.93 Aligned_cols=73 Identities=21% Similarity=0.156 Sum_probs=59.1
Q ss_pred HHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCcc------ccCCCCCcHHHHHHHcCC
Q 004380 686 LLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNIN------FRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 686 llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN------~rD~~G~TPLH~AA~~GH 758 (758)
+|+....+|.+..+.-.|..++.+|..||||||||+..|+..++..|++.|++.. ..+..|-|+--.|...||
T Consensus 614 fca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~ 692 (975)
T KOG0520|consen 614 FCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGH 692 (975)
T ss_pred HhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccc
Confidence 3555556666555566788899999999999999999999999999999887654 345679999999988876
No 115
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=95.08 E-value=0.012 Score=71.93 Aligned_cols=71 Identities=20% Similarity=0.033 Sum_probs=63.8
Q ss_pred HhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 688 KEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 688 kekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
.++.++..+.+|+.+.+.+..+++.|.|+|-+||.-|+...+.+|++++|+++.+|+.-.|+++-|.+.||
T Consensus 1002 a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh 1072 (2131)
T KOG4369|consen 1002 ANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGH 1072 (2131)
T ss_pred cCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhch
Confidence 34556777888998888899999999999999999999999999999999999999999999999999887
No 116
>cd01176 IPT_RBP-Jkappa IPT domain of the recombination signal Jkappa binding protein (RBP-Jkappa). RBP-J kappa, was initially considered to be involved in V(D)J recombination because of its DNA binding specificity and structural similarity to site-specific recombinases known as the integrase family. Further studies indicated that RBP-J kappa functions as a repressor of transcription, via destabilization of the general transcription factor IID and recruitment of histone deacetylase complexes.
Probab=94.87 E-value=0.091 Score=47.51 Aligned_cols=66 Identities=15% Similarity=0.260 Sum_probs=52.1
Q ss_pred eEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCCC-----------CCcceeEEEEeCCCcccCccee
Q 004380 524 VKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-----------KVGRVPFYVTCSNRLSCSEVRE 592 (758)
Q Consensus 524 tKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PPh-----------~pG~VpLyVtcsn~~acSEVre 592 (758)
.-+-++|..|... +.+.|||+++-+.+-.+-.|.|.+|+- +|..||+.+.-.++..-+--..
T Consensus 20 amlEl~GenF~pn-------LkVWFG~veaeTmyR~~e~l~CvvPdis~f~~~w~~~~~p~~VPisLVR~DGvIY~T~lt 92 (97)
T cd01176 20 AMLELHGENFTPN-------LKVWFGDVEAETMYRCEESLLCVVPDISAFREEWRWVRQPVQVPISLVRNDGIIYPTGLT 92 (97)
T ss_pred EEEEEecCcCCCC-------ceEEECCcceEEEEEccceeEEecCCHHHhccCceEecCceEeeEEEEecCCeEecCCce
Confidence 5567889999864 789999999999889999999999972 5677888877766665555667
Q ss_pred cccc
Q 004380 593 FEYR 596 (758)
Q Consensus 593 FEYr 596 (758)
|+|.
T Consensus 93 FtYt 96 (97)
T cd01176 93 FTYT 96 (97)
T ss_pred EEec
Confidence 7764
No 117
>PF13606 Ank_3: Ankyrin repeat
Probab=94.84 E-value=0.017 Score=41.58 Aligned_cols=14 Identities=57% Similarity=0.641 Sum_probs=12.8
Q ss_pred CCCcHHHHHHHcCC
Q 004380 745 NGWTALHWAAYCGR 758 (758)
Q Consensus 745 ~G~TPLH~AA~~GH 758 (758)
+|+||||+||.+|+
T Consensus 1 ~G~T~Lh~A~~~g~ 14 (30)
T PF13606_consen 1 NGNTPLHLAASNGN 14 (30)
T ss_pred CCCCHHHHHHHhCC
Confidence 59999999999986
No 118
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.84 E-value=0.027 Score=62.35 Aligned_cols=72 Identities=17% Similarity=0.098 Sum_probs=54.9
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHc
Q 004380 682 LVQKLLKEKLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYC 756 (758)
Q Consensus 682 LL~~llkekl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~ 756 (758)
+++ +++.+..+ .++.|++.|.++|..|.....||-+|+..||..+|++||++||-...-...|- -.||+|.+
T Consensus 40 lce-acR~GD~d-~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~-RC~YgaLn 111 (516)
T KOG0511|consen 40 LCE-ACRAGDVD-RVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGD-RCHYGALN 111 (516)
T ss_pred HHH-HhhcccHH-HHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcc-hhhhhhhh
Confidence 444 44444333 45678889999999999999999999999999999999999997764344444 45677654
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.84 E-value=0.032 Score=63.58 Aligned_cols=70 Identities=23% Similarity=0.139 Sum_probs=54.8
Q ss_pred HHHHhhhHHHHHHHHHhCCCCCCc------cCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHH
Q 004380 685 KLLKEKLQVWLVQKAAEGGKGPCV------LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAA 754 (758)
Q Consensus 685 ~llkekl~e~Lv~~Lle~Gad~N~------~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA 754 (758)
..++.+.....++.|.+.+...|. .+..--|+||+||..|...+|..||+.|+|+-.+|..|.||...++
T Consensus 396 s~lkk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 396 SRLKKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred HHHhccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 344444444456667777766653 3445679999999999999999999999999999999999988765
No 120
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=94.82 E-value=0.034 Score=63.97 Aligned_cols=76 Identities=22% Similarity=0.175 Sum_probs=64.1
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCC--CCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcC
Q 004380 681 KLVQKLLKEKLQVWLVQKAAEGGKG--PCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCG 757 (758)
Q Consensus 681 ~LL~~llkekl~e~Lv~~Lle~Gad--~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~G 757 (758)
.+|+.+.+.+..+ +++.++++|.. +++.|+.|.|+||-||..++..++.+|+++||.+...|..|.||-.-|-..|
T Consensus 901 sllh~a~~tg~~e-ivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~ 978 (1004)
T KOG0782|consen 901 SLLHYAAKTGNGE-IVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAG 978 (1004)
T ss_pred hHHHHHHhcCChH-HHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcC
Confidence 4677777765543 56788888865 6778899999999999999999999999999999999999999988776544
No 121
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.11 E-value=0.091 Score=58.31 Aligned_cols=45 Identities=29% Similarity=0.235 Sum_probs=43.2
Q ss_pred CcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 714 QGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 714 ~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
..-|-.||..|..+.|+.|++.|++||.+|.....||.+|+.+||
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGH 81 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGH 81 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCc
Confidence 566889999999999999999999999999999999999999998
No 122
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=93.99 E-value=0.032 Score=40.43 Aligned_cols=14 Identities=50% Similarity=0.719 Sum_probs=12.7
Q ss_pred CCCcHHHHHHHcCC
Q 004380 745 NGWTALHWAAYCGR 758 (758)
Q Consensus 745 ~G~TPLH~AA~~GH 758 (758)
+|+||||+||.+|+
T Consensus 1 dG~TpLh~A~~~~~ 14 (33)
T PF00023_consen 1 DGNTPLHYAAQRGH 14 (33)
T ss_dssp TSBBHHHHHHHTTC
T ss_pred CcccHHHHHHHHHH
Confidence 59999999999885
No 123
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=93.76 E-value=0.036 Score=67.57 Aligned_cols=49 Identities=33% Similarity=0.369 Sum_probs=46.1
Q ss_pred CCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 710 DHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 710 D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-..|.|+||.|+..|-.-++++|+..|+++|.+|..|.||||.+...||
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~ 701 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGH 701 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcc
Confidence 3567999999999999999999999999999999999999999998886
No 124
>cd01177 IPT_NFkappaB IPT domain of the transcription factor NFkappaB and related transcription factors. NFkappaB is considered a central regulator of stress responses, activated by different stressful conditions, including physical stress, oxidative stress, and exposure to certain chemicals. NFkappaB blocking cell apoptosis in several cell types, gives it an important role in cell proliferation and differentiation.
Probab=93.29 E-value=0.19 Score=46.58 Aligned_cols=82 Identities=15% Similarity=0.074 Sum_probs=58.0
Q ss_pred EEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc-------eeee-----EEEecCceeeecCC-C-----
Q 004380 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-------EVPA-----EIVAGGVLRCHTSS-Q----- 570 (758)
Q Consensus 509 sI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~-------eVpa-----ei~q~GvLrC~~PP-h----- 570 (758)
.|++++=.-|++.||.||.+++..+.-. ...|.|-+. |+-+ .+-..-.+++.+|| |
T Consensus 2 ~I~r~s~~sgsv~GG~Ev~LLcdKV~K~------dI~VrF~e~~~~~~~We~~g~f~~~dVH~Q~AIvfkTPpY~~~~I~ 75 (102)
T cd01177 2 KICRLDKTSGSVKGGDEVYLLCDKVQKE------DIQVRFFEEDEEETVWEAFGDFSQTDVHRQYAIVFRTPPYHDPDIT 75 (102)
T ss_pred EEEEecCcccccCCCcEEEEEecccCCC------CCEEEEEEcCCCCCceEEEeeECHHHcccceEEEEeCCCCCCCcCC
Confidence 7999999999999999999999865421 134566543 2222 23345678999999 4
Q ss_pred CCcceeEEEEeCCCcccCcceecccc
Q 004380 571 KVGRVPFYVTCSNRLSCSEVREFEYR 596 (758)
Q Consensus 571 ~pG~VpLyVtcsn~~acSEVreFEYr 596 (758)
.|=.|-+++.-.....+|+...|+|.
T Consensus 76 ~pV~V~iqL~Rpsd~~~Sep~~F~Y~ 101 (102)
T cd01177 76 EPVKVKIQLKRPSDGERSESVPFTYV 101 (102)
T ss_pred CceEEEEEEEeCCCCCccCCcceEEc
Confidence 44455566665545568999999995
No 125
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=92.70 E-value=0.06 Score=61.11 Aligned_cols=50 Identities=28% Similarity=0.246 Sum_probs=46.6
Q ss_pred cCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 709 LDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 709 ~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
++.++.-.+++||..|...+++.+.-.|.|++.+|.+.+|+||.||..||
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~ 551 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGH 551 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCc
Confidence 45667889999999999999999999999999999999999999999987
No 126
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=91.76 E-value=0.17 Score=57.86 Aligned_cols=52 Identities=27% Similarity=0.162 Sum_probs=44.1
Q ss_pred CccCCCCCc------HHHHHHHcCChhhHHHHHhcCCCccccCC-CCCcHHHHHHHcCC
Q 004380 707 CVLDHCGQG------VLHFAAALGYDWALEPTTVAGVNINFRDV-NGWTALHWAAYCGR 758 (758)
Q Consensus 707 N~~D~~G~T------pLHlAA~~G~~e~V~lLL~~GAdiN~rD~-~G~TPLH~AA~~GH 758 (758)
..+|.+|-| -||-++..|+.+..-.||..||++|+-+. .|.||||.||..|.
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq 179 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQ 179 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccc
Confidence 346666655 38999999999999999999999998754 79999999999884
No 127
>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function.
Probab=91.27 E-value=0.43 Score=56.69 Aligned_cols=103 Identities=21% Similarity=0.407 Sum_probs=69.1
Q ss_pred CChHHHHHHHhccccce-----eCcCCCCCCCCcceEe-ee--hhhhhhhcccCccceecCCCcchHhhhhhhccCCEee
Q 004380 27 LRPAEICEILRNYTKFR-----IAPESPHTPPSGSLFL-FD--RKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDV 98 (758)
Q Consensus 27 l~~~ei~~il~~~~~~~-----~~~~~~~~p~sgs~~l-~~--r~~~~~frkDg~~w~kkk~g~~vre~h~~lkv~~~~~ 98 (758)
|..++|+++|+.--+.- +.-.=..+|+-||||| |- -++.-.|-.|||.|.- -|.--+..|+|..+
T Consensus 30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~~l 102 (669)
T PF08549_consen 30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGYTL 102 (669)
T ss_pred CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCeEE
Confidence 67788888887754321 1112246789999987 42 2445779999999974 34445555666553
Q ss_pred EEE------EeeccccCcccceeeeecccccc---------cceEEEeeeeccC
Q 004380 99 LHC------YYAHGEENENFQRRSYWMLEEEL---------SHIVLVHYREVKG 137 (758)
Q Consensus 99 ~~~------~yah~~~~~~f~rr~yw~l~~~~---------~~ivlvhy~~~~~ 137 (758)
-. |+-=+|.....-||.|-|+-... ...+||||-.-..
T Consensus 103 -Ei~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~ 155 (669)
T PF08549_consen 103 -EIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP 155 (669)
T ss_pred -EEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence 22 33326788899999999996543 3589999987654
No 128
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=82.61 E-value=1.7 Score=50.81 Aligned_cols=50 Identities=22% Similarity=0.103 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 004380 690 KLQVWLVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNI 739 (758)
Q Consensus 690 kl~e~Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdi 739 (758)
+....+.++|+-.|+++-.+|.+|+|+|.+|-..|..+++..||.+|...
T Consensus 671 ~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 671 KGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 34455788899999999999999999999999999999999999999754
No 129
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=77.46 E-value=2.2 Score=50.34 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=40.1
Q ss_pred HHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhcCCCccccCCCCCc
Q 004380 699 AAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVAGVNINFRDVNGWT 748 (758)
Q Consensus 699 Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~T 748 (758)
+++.++.++..|.-|.+|+|+++.-|-.++++.++..-.+++.+-..|.+
T Consensus 415 lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 415 LIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred eecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 44556778889999999999999999999999988777666666555554
No 130
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=75.69 E-value=9.1 Score=46.91 Aligned_cols=79 Identities=14% Similarity=-0.024 Sum_probs=49.8
Q ss_pred CcchhHHHHhhhhcCCChhHHHHHHHHHHHHhhhHHHHHHHHHhCCCCC----------CccCCCCCcHHHHHHHcCChh
Q 004380 658 NDDWDLMLKLTAEEKFSSEEVKEKLVQKLLKEKLQVWLVQKAAEGGKGP----------CVLDHCGQGVLHFAAALGYDW 727 (758)
Q Consensus 658 ~~~w~~Lik~~~~~~~s~~~~~d~LL~~llkekl~e~Lv~~Lle~Gad~----------N~~D~~G~TpLHlAA~~G~~e 727 (758)
+++-.++...+.+..... .|.++++.-++-.. +++.++.+-... -..=..+.|||.+||..++.+
T Consensus 71 ~nenle~~eLLl~~~~~~---gdALL~aI~~~~v~--~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyE 145 (822)
T KOG3609|consen 71 DNENLELQELLLDTSSEE---GDALLLAIAVGSVP--LVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFE 145 (822)
T ss_pred ccccHHHHHHHhcCcccc---chHHHHHHHHHHHH--HHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchH
Confidence 344444554444433322 66677766655432 555555432211 112345789999999999999
Q ss_pred hHHHHHhcCCCccc
Q 004380 728 ALEPTTVAGVNINF 741 (758)
Q Consensus 728 ~V~lLL~~GAdiN~ 741 (758)
++++||.+|+.+-.
T Consensus 146 il~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 146 ILQCLLTRGHCIPI 159 (822)
T ss_pred HHHHHHHcCCCCCC
Confidence 99999999998753
No 131
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=73.62 E-value=2.6 Score=51.44 Aligned_cols=16 Identities=25% Similarity=-0.008 Sum_probs=12.2
Q ss_pred CCCCCcHHHHHHHcCC
Q 004380 743 DVNGWTALHWAAYCGR 758 (758)
Q Consensus 743 D~~G~TPLH~AA~~GH 758 (758)
-.-+-|||++||.+++
T Consensus 128 ft~ditPliLAAh~Nn 143 (822)
T KOG3609|consen 128 FTPDITPLMLAAHLNN 143 (822)
T ss_pred CCCCccHHHHHHHhcc
Confidence 3456799999998764
No 132
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=72.11 E-value=4.2 Score=47.41 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=35.7
Q ss_pred HHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhHHHHHhc
Q 004380 695 LVQKAAEGGKGPCVLDHCGQGVLHFAAALGYDWALEPTTVA 735 (758)
Q Consensus 695 Lv~~Lle~Gad~N~~D~~G~TpLHlAA~~G~~e~V~lLL~~ 735 (758)
-++.|+..|+++..+++.|+++||-|+..|...++..+|.+
T Consensus 70 ~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 70 AARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred HHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 45678899999999999999999999999999888766654
No 133
>KOG3610 consensus Plexins (functional semaphorin receptors) [Signal transduction mechanisms]
Probab=70.86 E-value=4.4 Score=51.00 Aligned_cols=77 Identities=17% Similarity=0.105 Sum_probs=55.4
Q ss_pred CCceEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc-eeeeEEEecCceeeecCCCC--CcceeEEEEe
Q 004380 505 DQLYSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEIVAGGVLRCHTSSQK--VGRVPFYVTC 581 (758)
Q Consensus 505 ~q~fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~-eVpaei~q~GvLrC~~PPh~--pG~VpLyVtc 581 (758)
-+.|+|++|+|.-|+..|||.|+|.|..+..-.+...+...|-=.-. .++.+..-...+.|..-++. ||.|.++|-.
T Consensus 47 c~~P~i~~~~P~~g~~eggt~iti~g~nlg~~~~dv~~~v~Va~v~c~~~~~~y~~~~~i~C~~~~~~~~~g~v~~~v~~ 126 (1025)
T KOG3610|consen 47 CPLPSITALSPLNGPIEGGTNISIVGTNLGNSLNDVSDGVKVAGVRCSPVAEEYDCSPCIACSPGANGSWPGPINVAVGV 126 (1025)
T ss_pred cCCCcccceeeccccccCCceeeeeeeehhhhhhhccCCceEeeeecCCCccccccccceeeccCCCCCCCCceeEEecc
Confidence 55688999999999999999999999988765432222222221111 34456667778999988875 7999988873
No 134
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=48.59 E-value=8.2 Score=45.80 Aligned_cols=58 Identities=12% Similarity=0.097 Sum_probs=49.8
Q ss_pred EEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCC-CCCcceeEEEEe
Q 004380 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS-QKVGRVPFYVTC 581 (758)
Q Consensus 509 sI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PP-h~pG~VpLyVtc 581 (758)
.|.|++|-.+...++++|+.+|..+.+. .....+|..+...-++|+ ..+|.|-|.|+.
T Consensus 244 vprd~~~~Q~~i~~~~~v~~~g~n~~~~---------------als~~~~~~s~~~~~l~~~d~~~~v~~~i~~ 302 (605)
T KOG3836|consen 244 VPRDMRRFQVLINGGVEVTLLGANFKDI---------------ALSTQCSEESTMVNYLPPSDNPGSVSVSITD 302 (605)
T ss_pred Cccccccccccccccceecccccchhhh---------------hhcccccccccceeeccccccCCCceeeecc
Confidence 7999999999999999999999998762 334567888889999987 599999998885
No 135
>PF09099 Qn_am_d_aIII: Quinohemoprotein amine dehydrogenase, alpha subunit domain III; InterPro: IPR015183 This domain is predominantly found in the prokaryotic protein quinohemoprotein amine dehydrogenase, adopting an immunoglobulin-like beta-sandwich fold, with seven strands arranged into two beta sheets; the fold is possibly related to the immunoglobulin and/or fibronectin type III superfamilies. The precise function of this domain has not, as yet, been defined []. ; PDB: 1JMZ_A 1JMX_A 1PBY_A 1JJU_A.
Probab=46.65 E-value=68 Score=28.79 Aligned_cols=63 Identities=21% Similarity=0.173 Sum_probs=40.4
Q ss_pred eEEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc-eeeeEE-EecCceee--ecCCC-CCcceeEEE
Q 004380 508 YSIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-EVPAEI-VAGGVLRC--HTSSQ-KVGRVPFYV 579 (758)
Q Consensus 508 fsI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~-eVpaei-~q~GvLrC--~~PPh-~pG~VpLyV 579 (758)
++|.-++|.---..++++|+|.|+.|... +.||.= +|.... ..++-++- .+... .||.++|.+
T Consensus 2 p~i~aV~P~~lkaG~~t~vti~Gt~L~~~---------v~l~~Gv~v~~v~~~s~~~v~v~V~~aa~a~~G~~~v~v 69 (81)
T PF09099_consen 2 PTILAVSPAGLKAGEETTVTIVGTGLAGT---------VDLGPGVEVLKVVSASPDEVVVRVKAAADAAPGIRTVRV 69 (81)
T ss_dssp SEEEEEESSEEETTCEEEEEEEEES-TT----------EE--TTEEEEEEEEE-STCEEEEEEEECTSSSEEEEEEE
T ss_pred CeEEEECchhccCCCeEEEEEEecCcccc---------eecCCCeEEEEEEEeCCCEEEEEEEEcCCCCCccEEEEe
Confidence 47899999999999999999999999332 777765 444323 33443333 44443 667777666
No 136
>PF05587 Anth_Ig: Anthrax receptor extracellular domain; InterPro: IPR008400 Anthrax is an acute disease in humans and animals caused by the bacterium Bacillus anthracis, which can be lethal. There are effective vaccines against anthrax, and some forms of the disease respond well to antibiotic treatment. The anthrax bacillus is one of only a few that can form long-lived spores. The anthrax toxin consists of the proteins protective antigen (PA) lethal factor (LF) and oedema factor (EF). The first step of toxin entry into host cells is the recognition by PA of a receptor on the surface of the target cell. The subsequent cleavage of receptor-bound PA enables EF and LF to bind and form a heptameric PA63 pre-pore, which triggers endocytosis. PA has been shown to bind to two cellular receptors: anthrax toxin receptor/tumour endothelial marker 8 and capillary morphogenesis protein 2 (CMG2), which are closely related host cell receptors. Both bind to PA with high affinity and are capable of mediating toxicity [, ], and both are type 1 membrane proteins that include an approximately 200-aa extracellular von Willebrand factor A (VWA) domain with a metal ion-dependent adhesion site (MIDAS) motif []. This region is found in the putatively extracellular N-terminal half of the anthrax receptor. It is probably part of the Ig superfamily and most closely related to IPR002909 from INTERPRO.; GO: 0004872 receptor activity, 0016021 integral to membrane; PDB: 3N2N_E 1SHT_X 1TZN_o 1SHU_X.
Probab=36.87 E-value=11 Score=35.28 Aligned_cols=75 Identities=17% Similarity=0.306 Sum_probs=0.0
Q ss_pred EEEeecCCCcCCCCceEEEEEccCCCchhhhcccceEEee--CCc---eeeeEEEecCceeeecCC-CCCcce-eEEEEe
Q 004380 509 SIIDFSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMF--GEI---EVPAEIVAGGVLRCHTSS-QKVGRV-PFYVTC 581 (758)
Q Consensus 509 sI~d~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmF--Gd~---eVpaei~q~GvLrC~~PP-h~pG~V-pLyVtc 581 (758)
.|..+-|.---+.+.-.|.|.|.+|....... .-.|-| .+. .+-...+++..|.|-+|- ++||.+ .|+|+.
T Consensus 7 Eil~~ePSsvC~ge~f~Vvv~G~GF~~~~~~d--~ViC~F~~n~t~~~~~KP~~v~dt~llCPaP~l~~~G~~~~v~VSl 84 (105)
T PF05587_consen 7 EILSVEPSSVCVGESFQVVVRGNGFNNARNVD--QVICRFKFNDTKTVDEKPVSVEDTYLLCPAPVLEEPGQTIFVEVSL 84 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEcCCceECCCceEEEEECccccccCCCC--eEEEEEEECCeeEEEeCCcEEcCCEEECCCccccCCCCEEEEEEEE
Confidence 57778888888999999999999988765422 244554 433 222337999999999986 799975 567776
Q ss_pred CCCc
Q 004380 582 SNRL 585 (758)
Q Consensus 582 sn~~ 585 (758)
.|+.
T Consensus 85 NnG~ 88 (105)
T PF05587_consen 85 NNGK 88 (105)
T ss_dssp ----
T ss_pred cCCE
Confidence 6554
No 137
>PF14545 DBB: Dof, BCAP, and BANK (DBB) motif,
Probab=34.32 E-value=92 Score=30.88 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=48.4
Q ss_pred ecCCCcCCCCceEEEEEccCCCchhhhcccceEEeeCCc-----eeeeEEEecCceeeecCCC---CCcceeEEEEeCCC
Q 004380 513 FSPNWAYVSSEVKVLITGRFLMSQQEAENCKWSCMFGEI-----EVPAEIVAGGVLRCHTSSQ---KVGRVPFYVTCSNR 584 (758)
Q Consensus 513 ~SP~wg~~~GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~-----eVpaei~q~GvLrC~~PPh---~pG~VpLyVtcsn~ 584 (758)
+.|..=.++.. ||.|+=.--... ....-|.|--. .++++.|.+-|+++-+|-. -+|.|.|.|.|+|-
T Consensus 3 V~P~rI~cg~~-~vfIiL~~~l~~----~~~~eVef~~~n~~~~~~~~~~~N~yt~~~~aPd~~~~pag~V~v~v~~~g~ 77 (142)
T PF14545_consen 3 VQPSRIRCGQP-EVFIILRDPLDE----EDTVEVEFESNNKPIRRVPAKWENPYTLQFKAPDFCLEPAGSVNVRVYCDGV 77 (142)
T ss_pred ecCceeecCCC-EEEEEEeCCCCC----CCeEEEEEEeCCCeeEeccceEECCEEEEEECchhcCCCCceEEEEEEECCE
Confidence 45666667777 777775432221 12345555332 4778889999999999998 99999999999985
Q ss_pred c
Q 004380 585 L 585 (758)
Q Consensus 585 ~ 585 (758)
.
T Consensus 78 ~ 78 (142)
T PF14545_consen 78 S 78 (142)
T ss_pred E
Confidence 4
No 138
>KOG3743 consensus Recombination signal binding protein-J kappa(CBF1, Su(H), HS2NF5) [Transcription]
Probab=33.88 E-value=43 Score=39.49 Aligned_cols=41 Identities=17% Similarity=0.380 Sum_probs=34.6
Q ss_pred CceEEEEEccCCCchhhhcccceEEeeCCceeeeEEEecCceeeecCC
Q 004380 522 SEVKVLITGRFLMSQQEAENCKWSCMFGEIEVPAEIVAGGVLRCHTSS 569 (758)
Q Consensus 522 GgtKVlIlGsf~~~~~~~~~~~~~cmFGd~eVpaei~q~GvLrC~~PP 569 (758)
.-+-+.+.|..|.+. +.+.||++|+++.+-..-+|.|.+|.
T Consensus 506 d~amlel~g~nf~p~-------l~vwfg~~e~et~~r~~~sl~c~Vp~ 546 (622)
T KOG3743|consen 506 DVAMLELHGQNFVPN-------LQVWFGDVEAETYYRSGESLQCVVPD 546 (622)
T ss_pred ceeEEEecCCCCCCC-------ceeeccccCchhhhcccceEEEEeCC
Confidence 345566779999876 77999999999999888899999997
No 139
>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif. The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.
Probab=31.21 E-value=21 Score=30.12 Aligned_cols=9 Identities=56% Similarity=1.106 Sum_probs=5.7
Q ss_pred ccCccceec
Q 004380 70 KDGHNWRKK 78 (758)
Q Consensus 70 kDg~~w~kk 78 (758)
.|||.|||=
T Consensus 2 ~Dgy~WRKY 10 (60)
T PF03106_consen 2 DDGYRWRKY 10 (60)
T ss_dssp -SSS-EEEE
T ss_pred CCCCchhhc
Confidence 499999873
No 140
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=31.01 E-value=73 Score=34.13 Aligned_cols=48 Identities=10% Similarity=-0.068 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCC-CCCCc---cCCCCCcHHHHHHHcCChhhHHHHHhcCCCc
Q 004380 692 QVWLVQKAAEGG-KGPCV---LDHCGQGVLHFAAALGYDWALEPTTVAGVNI 739 (758)
Q Consensus 692 ~e~Lv~~Lle~G-ad~N~---~D~~G~TpLHlAA~~G~~e~V~lLL~~GAdi 739 (758)
...+++..+.+| +++|. +-..|-|.|--|...+..+++.+||++||-.
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 344556666666 45764 4578999999999999999999999999843
No 141
>TIGR03437 Soli_cterm Solibacter uncharacterized C-terminal domain. This model describes a protein domain found in 90 proteins of Solibacter usitatus Ellin6076, nearly always as the C-terminal domain of a much larger protein. No homologs to this domain are detected outside of S. usitatus, a member of the Acidobacteria.
Probab=26.19 E-value=2e+02 Score=30.35 Aligned_cols=63 Identities=17% Similarity=0.129 Sum_probs=48.1
Q ss_pred CceEEEEEccCCCchhhh--------cccceEEeeCCceeeeEEEecCceeeecCCC-CCcceeEEEEeCCC
Q 004380 522 SEVKVLITGRFLMSQQEA--------ENCKWSCMFGEIEVPAEIVAGGVLRCHTSSQ-KVGRVPFYVTCSNR 584 (758)
Q Consensus 522 GgtKVlIlGsf~~~~~~~--------~~~~~~cmFGd~eVpaei~q~GvLrC~~PPh-~pG~VpLyVtcsn~ 584 (758)
-|.=|+|-|++|...... .-..-++.|+++.+|-.+++.+-+.|.+|.. .+|.+.+.|...+.
T Consensus 4 PG~~vsIfG~~L~~~t~~~~~~plpt~l~Gv~V~vnG~~APl~yvSp~QIN~qvP~~~~~g~~~v~V~~~g~ 75 (215)
T TIGR03437 4 PGSIVSIFGTNLAPATLTAAGGPLPTSLGGVSVTVNGVAAPLLYVSPGQINAQVPYEVAPGAATVTVTYNGG 75 (215)
T ss_pred CCcEEEEEeccCCCccccccCCCCccccCCeEEEECCEEEEEEEeCcceEEEEeCCCcCCCcEEEEEEeCCc
Confidence 456688888888753210 0012569999999999999999999999986 68999999987654
No 142
>smart00774 WRKY DNA binding domain. The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.
Probab=24.01 E-value=29 Score=29.34 Aligned_cols=9 Identities=56% Similarity=1.121 Sum_probs=7.1
Q ss_pred ccCccceec
Q 004380 70 KDGHNWRKK 78 (758)
Q Consensus 70 kDg~~w~kk 78 (758)
.|||.|||=
T Consensus 2 ~DGy~WRKY 10 (59)
T smart00774 2 DDGYQWRKY 10 (59)
T ss_pred CCccccccc
Confidence 599999863
No 143
>COG4674 Uncharacterized ABC-type transport system, ATPase component [General function prediction only]
Probab=23.36 E-value=1.5e+02 Score=31.55 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=36.0
Q ss_pred cceEEeeCCceeeeEE---EecCceeeecCCCCCcceeEEEEeCCCcc
Q 004380 542 CKWSCMFGEIEVPAEI---VAGGVLRCHTSSQKVGRVPFYVTCSNRLS 586 (758)
Q Consensus 542 ~~~~cmFGd~eVpaei---~q~GvLrC~~PPh~pG~VpLyVtcsn~~a 586 (758)
-+.+|-||...+.-.+ +.+|-|||+..|.-+|+.++.=...+...
T Consensus 9 ~~vsVsF~GF~Aln~ls~~v~~Gelr~lIGpNGAGKTT~mD~ItGKtr 56 (249)
T COG4674 9 DGVSVSFGGFKALNDLSFSVDPGELRVLIGPNGAGKTTLMDVITGKTR 56 (249)
T ss_pred eceEEEEcceeeeeeeEEEecCCeEEEEECCCCCCceeeeeeecccCC
Confidence 3578999999666444 89999999999999999998766655443
No 144
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=20.15 E-value=1e+02 Score=31.97 Aligned_cols=37 Identities=27% Similarity=0.094 Sum_probs=31.6
Q ss_pred HHHHHHHcCChhhHHHHHhcCCCccccCCCCCcHHHHHHHcCC
Q 004380 716 VLHFAAALGYDWALEPTTVAGVNINFRDVNGWTALHWAAYCGR 758 (758)
Q Consensus 716 pLHlAA~~G~~e~V~lLL~~GAdiN~rD~~G~TPLH~AA~~GH 758 (758)
-|.+||..|+...|--.|++|-+++. ++|-.|+.++|
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynh 182 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNH 182 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhH
Confidence 46789999999999999999988874 88999988765
Done!