Your job contains 1 sequence.
>004383
MNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGQHQQQQNPTPQ
HPQRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVA
ARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLAA
ARDFWLLRYSTSLEDGSLVVCERSLTSSTGGPTGPPPSSFVRAEMLASGFLIRPCEGGGS
IIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAMRHIRQIAQETSGEIQYGGGRQP
AVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINSSPNKFLGSQYNWSMLPA
FGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGF
PSSHVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALARDMYLLQLCSGIDENTVGACAQL
VFAPIDESFADDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGSGGARPAGG
TELSNYNSRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAISPSRLGPHAG
PKALPGSPEALTLARWISRSYRIHTGGELLRADSLTGDALLKQLWHHSDAIMCCSLKTNA
SPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCTEFAKIMQQGFAYLPGGMCV
SSMGRAVSYEQAVAWKVLDDDDSNHCLAFMFMNWSFV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004383
(757 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 3022 4.3e-315 1
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 2937 4.4e-306 1
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 2592 1.6e-269 1
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 2471 1.0e-256 1
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 2430 2.3e-252 1
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 147 4.7e-07 3
UNIPROTKB|Q60B73 - symbol:MCA0608 "Putative uncharacteriz... 120 2.4e-06 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 155 2.6e-06 2
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 148 2.3e-05 3
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 3022 (1068.9 bits), Expect = 4.3e-315, P = 4.3e-315
Identities = 586/759 (77%), Positives = 648/759 (85%)
Query: 1 MNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXX 60
MNKLLMEENDRLQKQVS+LVYENG+M+ QLH+A TTTDNSCESVV+SG
Sbjct: 100 MNKLLMEENDRLQKQVSNLVYENGHMKHQLHTASGTTTDNSCESVVVSGQQHQQQNPNPQ 159
Query: 61 XXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVA 120
RDA+NPAGLL++AEE LAEFLSKATGTAVDWVQMIGMKPGPDSIGIVA+SRNCSG+A
Sbjct: 160 HQQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGIA 219
Query: 121 ARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLAA 180
ARACGLVSL+P K+AEILKD PSW RDCR +D LSVIP GNGGTIELIY Q YAPTTLAA
Sbjct: 220 ARACGLVSLEPMKVAEILKDRPSWLRDCRSVDTLSVIPAGNGGTIELIYTQMYAPTTLAA 279
Query: 181 ARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFLIRPCEGGGS 240
ARDFW LRYST LEDGS VVCERSL FVRAEM SGFLIRPC+GGGS
Sbjct: 280 ARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFVRAEMKPSGFLIRPCDGGGS 339
Query: 241 IIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAMRHIRQIAQETSGEIQYGGGRQP 300
I+HIVDHVDLDAWSVPEV+RPLYESSKILAQKMT+AA+RH+RQIAQETSGE+QYGGGRQP
Sbjct: 340 ILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHVRQIAQETSGEVQYGGGRQP 399
Query: 301 AVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINSSPNKFLGSQYNWSMLPA 360
AVLRTFSQRL RGFNDA+NGF+DDGWS + SDG EDVTV IN SP KF GSQY S LP+
Sbjct: 400 AVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMINLSPGKFGGSQYGNSFLPS 459
Query: 361 FG-GVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGG 419
FG GVLCAKASMLLQNVPPA+LVRFLREHRSEWADYGVDAY+AA L+ASP+AVPCAR GG
Sbjct: 460 FGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAYAAASLRASPFAVPCARAGG 519
Query: 420 FPSSHVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALARDMYLLQLCSGIDENTVGACAQ 479
FPS+ VILPLA TVEHEE LEVVRLEGHA+SPED+ LARDMYLLQLCSG+DEN VG CAQ
Sbjct: 520 FPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDMYLLQLCSGVDENVVGGCAQ 579
Query: 480 LVFAPIDESFADDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGSGGARPAG 539
LVFAPIDESFADDAPLL SGFR+IPL+ K+ +G +A+RTLDLASALE G R AG
Sbjct: 580 LVFAPIDESFADDAPLLPSGFRIIPLEQKST--PNGASANRTLDLASALE---GSTRQAG 634
Query: 540 GTELSNYNSRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAISPSRLGPHA 599
+ + N RSVLTIAFQFTF+NH RD+VA+MARQYVRS+VGS+QRVA+AI+P R G +
Sbjct: 635 EADPNGCNFRSVLTIAFQFTFDNHSRDSVASMARQYVRSIVGSIQRVALAIAP-RPGSNI 693
Query: 600 GPKALPGSPEALTLARWISRSYRIHTGGELLRADSLT-GDALLKQLWHHSDAIMCCSLKT 658
P ++P SPEALTL RWISRSY +HTG +L +DS T GD LL QLW+HSDAI+CCSLKT
Sbjct: 694 SPISVPTSPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTLLHQLWNHSDAILCCSLKT 753
Query: 659 NASPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCTEFAKIMQQGFAYLPGGM 718
NASPVFTFANQ GLDMLETTLVALQDIMLDK LDE GRK LC+EF KIMQQG+A+LP G+
Sbjct: 754 NASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALCSEFPKIMQQGYAHLPAGV 813
Query: 719 CVSSMGRAVSYEQAVAWKVLDDDDSNHCLAFMFMNWSFV 757
C SSMGR VSYEQA WKVL+DD+SNHCLAFMF+NWSFV
Sbjct: 814 CASSMGRMVSYEQATVWKVLEDDESNHCLAFMFVNWSFV 852
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 2937 (1038.9 bits), Expect = 4.4e-306, P = 4.4e-306
Identities = 575/760 (75%), Positives = 641/760 (84%)
Query: 1 MNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXX 60
MNKLLMEENDRLQKQVS+LVYENG+M+ ++H+A TTTDNSCESVV+SG
Sbjct: 96 MNKLLMEENDRLQKQVSNLVYENGFMKHRIHTASGTTTDNSCESVVVSGQQRQQQNPTHQ 155
Query: 61 XXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVA 120
RD +NPA LL++AEETLAEFL KATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSG+A
Sbjct: 156 HPQRDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGIA 215
Query: 121 ARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLAA 180
ARACGLVSL+P K+AEILKD PSWFRDCRC++ L+VIPTGNGGTIEL+ Q YAPTTLAA
Sbjct: 216 ARACGLVSLEPMKVAEILKDRPSWFRDCRCVETLNVIPTGNGGTIELVNTQIYAPTTLAA 275
Query: 181 ARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFLIRPCEGGGS 240
ARDFW LRYSTSLEDGS VVCERSL FVRA+ML+SGFLIRPC+GGGS
Sbjct: 276 ARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVRAKMLSSGFLIRPCDGGGS 335
Query: 241 IIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAMRHIRQIAQETSGEIQYGGGRQP 300
IIHIVDHVDLD SVPEVLRPLYESSKILAQKMT+AA+RH+RQIAQETSGE+QY GGRQP
Sbjct: 336 IIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHVRQIAQETSGEVQYSGGRQP 395
Query: 301 AVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINSSPNKFLGSQYNWSMLPA 360
AVLRTFSQRL RGFNDA+NGF+DDGWS +SSDGGED+T+ INSS KF GSQY S LP+
Sbjct: 396 AVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMINSSSAKFAGSQYGSSFLPS 455
Query: 361 FG-GVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGG 419
FG GVLCAKASMLLQNVPP +L+RFLREHR+EWADYGVDAYSAA L+A+PYAVPC R GG
Sbjct: 456 FGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAYSAASLRATPYAVPCVRTGG 515
Query: 420 FPSSHVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALARDMYLLQLCSGIDENTVGACAQ 479
FPS+ VILPLA T+EHEEFLEVVRL GHA+SPED+ L+RDMYLLQLCSG+DEN VG CAQ
Sbjct: 516 FPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDMYLLQLCSGVDENVVGGCAQ 575
Query: 480 LVFAPIDESFADDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGSGGARPAG 539
LVFAPIDESFADDAPLL SGFRVIPLD K D +ASRT DLAS+L+ G +
Sbjct: 576 LVFAPIDESFADDAPLLPSGFRVIPLDQKTN-PNDHQSASRTRDLASSLD---GSTK--- 628
Query: 540 GTELSNYNSRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAISPSRLGPHA 599
T+ S NSR VLTIAFQFTF+NH RDNVA MARQYVR+VVGS+QRVA+AI+P P
Sbjct: 629 -TD-SETNSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVGSIQRVALAITPR---P-- 681
Query: 600 GPKALPGSPEALTLARWISRSYRIHTGGELLRADSLT--GDALLKQLWHHSDAIMCCSLK 657
G LP SPEALTL RWI+RSY IHTG +L ADS + GD LLKQLW HSDAI+CCSLK
Sbjct: 682 GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDTLLKQLWDHSDAILCCSLK 741
Query: 658 TNASPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCTEFAKIMQQGFAYLPGG 717
TNASPVFTFANQAGLDMLETTLVALQDIMLDK LD++GR+ LC+EFAKIMQQG+A LP G
Sbjct: 742 TNASPVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALCSEFAKIMQQGYANLPAG 801
Query: 718 MCVSSMGRAVSYEQAVAWKVLDDDDSNHCLAFMFMNWSFV 757
+CVSSMGR VSYEQA WKV+DD++SNHCLAF ++WSFV
Sbjct: 802 ICVSSMGRPVSYEQATVWKVVDDNESNHCLAFTLVSWSFV 841
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 2592 (917.5 bits), Expect = 1.6e-269, P = 1.6e-269
Identities = 514/763 (67%), Positives = 609/763 (79%)
Query: 1 MNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXX 60
MNKLLMEENDRLQKQVS LV ENGYM+QQL + D SCESVV +
Sbjct: 100 MNKLLMEENDRLQKQVSQLVCENGYMKQQLTTV---VNDPSCESVVTTPQHSL------- 149
Query: 61 XXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVA 120
RDA++PAGLL++AEETLAEFLSKATGTAVDWVQM GMKPGPDS+GI A+S+ C+GVA
Sbjct: 150 ---RDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQRCNGVA 206
Query: 121 ARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLAA 180
ARACGLVSL+P KIAEILKD PSWFRDCR L+V ++ P GNGGTIEL+YMQTYAPTTLA
Sbjct: 207 ARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQTYAPTTLAP 266
Query: 181 ARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFLIRPCEGGGS 240
ARDFW LRY+TSL++GS VVCERSL FVRAEML+SG+LIRPC+GGGS
Sbjct: 267 ARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQFVRAEMLSSGYLIRPCDGGGS 326
Query: 241 IIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAMRHIRQIAQETSGEIQYGGGRQP 300
IIHIVDH++L+AWSVP+VLRPLYESSK++AQKMT++A+R+IRQ+AQE++GE+ YG GRQP
Sbjct: 327 IIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRYIRQLAQESNGEVVYGLGRQP 386
Query: 301 AVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINSSPNKFLGSQYNWSMLPA 360
AVLRTFSQRLSRGFNDA+NGF DDGWS + DG ED+ VAINS+ K L + N L
Sbjct: 387 AVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVAINST--KHLNNISN--SLSF 442
Query: 361 FGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCARPGGF 420
GGVLCAKASMLLQNVPPA+L+RFLREHRSEWAD+ VDAYSAA LKA +A P RP F
Sbjct: 443 LGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYSAATLKAGSFAYPGMRPTRF 502
Query: 421 PSSHVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALARDMYLLQLCSGIDENTVGACAQL 480
S +I+PL HT+EHEE LEVVRLEGH+ + ED ++RD++LLQ+C+GIDEN VGAC++L
Sbjct: 503 TGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVHLLQICTGIDENAVGACSEL 562
Query: 481 VFAPIDESFADDAPLLASGFRVIPLDSKAAMQQDGPAAS-RTLDLASALEVGSGGARPAG 539
+FAPI+E F DDAPL+ SGFRVIP+D+K QD A+ RTLDL S+LEVG A
Sbjct: 563 IFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVGPSPEN-AS 621
Query: 540 GTELSNYNSRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAISPSRLGPHA 599
G S+ +SR +LTIAFQF FEN++++NVA MA QYVRSV+ SVQRVAMAISPS + P
Sbjct: 622 GNSFSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVISSVQRVAMAISPSGISPSL 681
Query: 600 GPKALPGSPEALTLARWISRSYRIHTGGELLRADSL-TGDALLKQLWHHSDAIMCCSLKT 658
G K PGSPEA+TLA+WIS+SY H G ELL DSL + D++LK LW H DAI+CCSLK
Sbjct: 682 GSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLKLLWDHQDAILCCSLKP 741
Query: 659 NASPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCTEFAKIMQQGFAYLPGGM 718
PVF FANQAGLDMLETTLVALQDI L+KI DE+GRK +C++FAK+MQQGFA LP G+
Sbjct: 742 Q--PVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQGFACLPSGI 799
Query: 719 CVSSMGRAVSYEQAVAWKVL---DDDDSN-HCLAFMFMNWSFV 757
CVS+MGR VSYEQAVAWKV +++++N HCLAF F+NWSFV
Sbjct: 800 CVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 2471 (874.9 bits), Expect = 1.0e-256, P = 1.0e-256
Identities = 485/762 (63%), Positives = 597/762 (78%)
Query: 1 MNKLLMEENDRLQKQVSHLVYENGYMRQQLHSAPATTTDNSCESVVMSGXXXXXXXXXXX 60
MNKLLMEENDRLQKQVS LV+EN Y RQ + D SCESVV SG
Sbjct: 92 MNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAKDTSCESVVTSGQHQLASQNPQ- 150
Query: 61 XXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVA 120
RDAS PAGLL++AEETLAEFLSKATGTAV+WVQM GMKPGPDSIGI+A+S C+GVA
Sbjct: 151 ---RDAS-PAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCTGVA 206
Query: 121 ARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLAA 180
ARACGLV L+PT++AEI+KD PSWFR+CR ++V++V+PT NGGT+EL+YMQ YAPTTLA
Sbjct: 207 ARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGTVELLYMQLYAPTTLAP 266
Query: 181 ARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFLIRPCEGGGS 240
RDFWLLRY++ LEDGSLVVCERSL FVRAEML+SG+LIRPC+GGGS
Sbjct: 267 PRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEMLSSGYLIRPCDGGGS 326
Query: 241 IIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAMRHIRQIAQE---TSGEIQYGGG 297
IIHIVDH+DL+A SVPEVLRPLYES K+LAQK TMAA+R ++QIAQE T+ + G G
Sbjct: 327 IIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIAQEVTQTNSSVN-GWG 385
Query: 298 RQPAVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINSSPNKFLGSQYNWS- 356
R+PA LR SQRLSRGFN+A+NGF D+GWS++ D +DVT+ +NSSP+K +G ++
Sbjct: 386 RRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVNSSPDKLMGLNLTFAN 444
Query: 357 -MLPAFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPCA 415
P VLCAKASMLLQNVPPA+L+RFLREHRSEWAD +DAY AA +K P + A
Sbjct: 445 GFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYLAAAVKVGPCS---A 501
Query: 416 RPGGFPSSHVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALARDMYLLQLCSGIDENTVG 475
R GGF VILPLAHT+EHEEF+EV++LEG SPED + RD++LLQLCSG+DEN VG
Sbjct: 502 RVGGF-GGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIFLLQLCSGMDENAVG 560
Query: 476 ACAQLVFAPIDESFADDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGSGGA 535
CA+L+FAPID SFADDAPLL SGFR+IPLDS +Q+ + +RTLDLASALE+GS G
Sbjct: 561 TCAELIFAPIDASFADDAPLLPSGFRIIPLDSA---KQEVSSPNRTLDLASALEIGSAGT 617
Query: 536 RPAGGTELSNYNSRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAISPSRL 595
+ + ++ +RSV+TIAF+F E+HM+++VA+MARQYVR ++ SVQRVA+A+SPS +
Sbjct: 618 KASTDQSGNSTCARSVMTIAFEFGIESHMQEHVASMARQYVRGIISSVQRVALALSPSHI 677
Query: 596 GPHAGPKALPGSPEALTLARWISRSYRIHTGGELLRADSLTGDALLKQLWHHSDAIMCCS 655
G + G+PEA TLARWI +SYR + G ELL+++S +++LK LWHH+DAI+CCS
Sbjct: 678 SSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCS 737
Query: 656 LKTNASPVFTFANQAGLDMLETTLVALQDIMLDKILDEAGRKILCTEFAKIMQQGFAYLP 715
+K A PVFTFANQAGLDMLETTLVALQDI L+KI D+ GRK LC+EF +IMQQGFA L
Sbjct: 738 MK--ALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQ 795
Query: 716 GGMCVSSMGRAVSYEQAVAWKVLDDDDSNHCLAFMFMNWSFV 757
GG+C+SSMGR VSYE+AVAWKVL+++++ HC+ F+F+NWSFV
Sbjct: 796 GGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 837
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 2430 (860.5 bits), Expect = 2.3e-252, P = 2.3e-252
Identities = 484/764 (63%), Positives = 588/764 (76%)
Query: 1 MNKLLMEENDRLQKQVSHLVYENGYMRQQ-LHSAPATTTDNSCESVVMSGXXXXXXXXXX 59
MNKLLMEENDRLQKQVSHLVYEN Y RQ + TTD SCESVV SG
Sbjct: 90 MNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQGNLATTDTSCESVVTSGQHHLTPQHQP 149
Query: 60 XXXXRDASNPAGLLAVAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGV 119
RDAS PAGLL++A+ETL EF+SKATGTAV+WVQM GMKPGPDSIGIVA+S C+G+
Sbjct: 150 ----RDAS-PAGLLSIADETLTEFISKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGI 204
Query: 120 AARACGLVSLDPTKIAEILKDCPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLA 179
AARACGLV LDPT++AEILKD P W RDCR LD+++V+ T NGGT+ELIYMQ YAPTTLA
Sbjct: 205 AARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVLSTANGGTLELIYMQLYAPTTLA 264
Query: 180 AARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFLIRPCEGGG 239
ARDFW+LRY++ +EDGSLV+CERSL FVRAE+L SG+LIRPCEGGG
Sbjct: 265 PARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPSPHFVRAEILPSGYLIRPCEGGG 324
Query: 240 SIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAMRHIRQIAQETSGEIQYGGGRQ 299
SI+HIVDH DL+ WSVPEVLR LYESS +LAQ+ TMAA+R++RQI+QE S G GR+
Sbjct: 325 SILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAALRYLRQISQEISQPNVTGWGRR 384
Query: 300 PAVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINSSPNKFLGSQY-----N 354
PA LR SQRLS+GFN+A+NGF D+GWS+L SDG +DVT+ +NSSP K + +
Sbjct: 385 PAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDVTLLVNSSPTKMMMTSSLPFANG 444
Query: 355 WSMLPAFGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAACLKASPYAVPC 414
++ +P+ VLCAKASMLLQNVPP++L+RFLREHR EWAD +DAYSAA +KA P ++P
Sbjct: 445 YTSMPS--AVLCAKASMLLQNVPPSILLRFLREHRQEWADNSIDAYSAAAIKAGPCSLPI 502
Query: 415 ARPGGFPSSHVILPLAHTVEHEEFLEVVRLEGHAFSPEDVALARDMYLLQLCSGIDENTV 474
RPG F VILPLAHT+E+EEF+EV++LE ED+ + D++LLQ+CSG+DEN V
Sbjct: 503 PRPGSF-GGQVILPLAHTIENEEFMEVIKLESLGHYQEDMMMPADIFLLQMCSGVDENAV 561
Query: 475 GACAQLVFAPIDESFADDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGSGG 534
+CA+L+FAPID SF+DDAP++ SGFR+IPLDSK+ +G + +RTLDLASAL+VGS
Sbjct: 562 ESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKS----EGLSPNRTLDLASALDVGS-- 615
Query: 535 ARPAGGTELSNYNSRSVLTIAFQFTFENHMRDNVAAMARQYVRSVVGSVQRVAMAISPSR 594
R AG + S NS+SV+TIAFQ FE HM++NVA+MARQYVRSV+ SVQRVA+A+SPS
Sbjct: 616 -RTAGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQYVRSVIASVQRVALALSPSS 674
Query: 595 LGPHAGPKALPGSPEALTLARWISRSYRIHTGGELLRADSLTGDALLKQLWHHSDAIMCC 654
+G + P SPEA TLARWIS SYR + G +LL+ G LLK LWHH DA+MCC
Sbjct: 675 -HQLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLKPH---GTDLLKSLWHHPDAVMCC 730
Query: 655 SLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKILDEA-GRKILCTEFAKIMQQGFAY 713
SLK SPVFTFANQAGLDMLETTLVALQDI LDKI D G+K L +EF +IMQQGF
Sbjct: 731 SLKA-LSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMC 789
Query: 714 LPGGMCVSSMGRAVSYEQAVAWKVLDDDDSNHCLAFMFMNWSFV 757
+ GG+C+SSMGRAV+YE+AV WKVL+DD+ HC+ FMF+NWSF+
Sbjct: 790 MDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 147 (56.8 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 75/292 (25%), Positives = 122/292 (41%)
Query: 120 AARACGLVSLDPTKIAEILKDCPSWFRD-C----RCL--DVLSVIPTGN-GGTIELIYMQ 171
A+R +V ++ + EIL D W C R L +VLS GN G ++++ +
Sbjct: 316 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAE 375
Query: 172 TYAPTTLAAARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFL 231
P+ L R+ + +RY DG V + SL R+ SG L
Sbjct: 376 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVDVSLDSLRPSP-------ITRSRRRPSGCL 428
Query: 232 IRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAM-RHIRQIAQETSG 290
I+ + G S + V+H+++D SV + +PL + K +A + R ++A +
Sbjct: 429 IQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMAS 488
Query: 291 EIQYGG--------GRQPAVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAIN 342
I GR+ ++L+ ++R+ F + W+ LS+ G +DV V
Sbjct: 489 NIPACDLSVITSPEGRK-SMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDVRVMTR 546
Query: 343 SSPNKFLGSQYNWSMLPAFGGVLCAKASMLLQNVPPALLVRFLREH--RSEW 392
S + G P G VL A S + V P + FLR+ RSEW
Sbjct: 547 KSMDD-PGRP------P--GIVLSAATSFWIP-VAPKRVFDFLRDENSRSEW 588
Score = 60 (26.2 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 26/102 (25%), Positives = 45/102 (44%)
Query: 491 DDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGSGGARPAGGTELSNYNSRS 550
D LL SGF ++P D A G S + +E G G T + S
Sbjct: 663 DYVALLPSGFAILP-DGSAR----GGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGG-S 716
Query: 551 VLTIAFQFTFENHMRDNVAAMARQYVRSVVG-SVQRVAMAIS 591
+LT+AFQ ++ ++ + V S++ +V+R+ A++
Sbjct: 717 LLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALA 758
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 702 EFAKIMQQGFAYLPGGMCVSSMGRA 726
++ ++ GFA LP G G A
Sbjct: 663 DYVALLPSGFAILPDGSARGGGGSA 687
Score = 37 (18.1 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 2 NKLLMEENDRLQKQ 15
N++L END+L+ +
Sbjct: 126 NQILKSENDKLRAE 139
>UNIPROTKB|Q60B73 [details] [associations]
symbol:MCA0608 "Putative uncharacterized protein"
species:243233 "Methylococcus capsulatus str. Bath" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE017282 GenomeReviews:AE017282_GR InterPro:IPR013978
Pfam:PF08670 RefSeq:YP_113124.1 GeneID:3103798 KEGG:mca:MCA0608
PATRIC:22604986 HOGENOM:HOG000234301 OMA:MPSRLTA
ProtClustDB:CLSK893354 Uniprot:Q60B73
Length = 157
Score = 120 (47.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 617 ISRSYRIHTGGELLRADSLTGDALLKQLWHHSDAIMCCSLKTNASPVFTFANQAGLDMLE 676
+ RS+R TG +L+ A +T + L+ A++ S T P+F +AN+ + +
Sbjct: 20 LRRSFRHCTGRDLVPA-RMTAPEAARYLFRAPLALL--SHDTAPDPIFNYANETAMALFG 76
Query: 677 TT---LVALQDIMLDKILDEAGRKILCTEFAKIMQQGFAYLPGGMCVSSMGRAVSYEQAV 733
+ AL + + D+ GR+ L A++ QG+ G+ +S GR + AV
Sbjct: 77 LNWEEITALPSRLSAEAGDQEGREAL---LARVEAQGYVDGYSGVRISRQGRRFRIQDAV 133
Query: 734 AWKVLDDDDSNHCLAFMFMNWSFV 757
W +LD+ + A MF +W ++
Sbjct: 134 VWNLLDELGAPAGQAAMFEHWQWL 157
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 155 (59.6 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 74/291 (25%), Positives = 124/291 (42%)
Query: 120 AARACGLVSLDPTKIAEILKDCPSW---FRDC--RCL--DVLSVIPTGN-GGTIELIYMQ 171
A+R +V ++ + EIL D W F R L +VLS GN G ++++ +
Sbjct: 307 ASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 366
Query: 172 TYAPTTLAAARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFL 231
P+ L R+ + +RY DGS V + SL +R SG L
Sbjct: 367 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVDVSLDSLRPSTP------ILRTRRRPSGCL 420
Query: 232 IRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAM-RHIRQIAQETS- 289
I+ G S + ++H+++D SV + +PL +S K +A + R ++A +
Sbjct: 421 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 480
Query: 290 ---GEIQY---GGGRQPAVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAINS 343
G++ GR+ ++L+ ++R+ F + W+ +S+ G +DV V
Sbjct: 481 NIPGDLSVITSPEGRK-SMLK-LAERMVMSFCSGVGASTAHAWTTMSTTGSDDVRVMTRK 538
Query: 344 SPNKFLGSQYNWSMLPAFGGVLCAKASMLLQNVPPALLVRFLREH--RSEW 392
S + G P G VL A S + V P + FLR+ R EW
Sbjct: 539 SMDD-PGRP------P--GIVLSAATSFWIP-VAPKRVFDFLRDENSRKEW 579
Score = 38 (18.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 702 EFAKIMQQGFAYLPGG 717
++ ++ GFA LP G
Sbjct: 654 DYVALLPSGFAILPDG 669
Score = 37 (18.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 491 DDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGS-GGA 535
D LL SGF ++P D G ++ ++ S GS GG+
Sbjct: 654 DYVALLPSGFAILP-DGSVG----GGDGNQHQEMVSTTSSGSCGGS 694
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 148 (57.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 79/292 (27%), Positives = 121/292 (41%)
Query: 120 AARACGLVSLDPTKIAEILKDCPSW---FRD----CRCLDVLSVIPTGN-GGTIELIYMQ 171
A+R +V ++ I EIL D W F L VLS GN G ++++ +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359
Query: 172 TYAPTTLAAARDFWLLRYSTSLEDGSLVVCERSLXXXXXXXXXXXXXXFVRAEMLASGFL 231
P+ L R+ + RY DGS V + SL R ASG L
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVDISLDSLQPNPPA-------RCRRRASGCL 412
Query: 232 IRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKMTMAAM-RHIRQIAQE--- 287
I+ G S + V+HV++D V + + + + K +A + R ++A
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472
Query: 288 --TSGE---IQYGGGRQPAVLRTFSQRLSRGFNDAINGFLDDGWSLLSSDGGEDVTVAIN 342
+SGE I GR+ ++L+ ++R+ F ++ W+ LS G EDV V
Sbjct: 473 NISSGEVGVITNQEGRR-SMLK-LAERMVISFCAGVSASTAHTWTTLSGTGAEDVRVMTR 530
Query: 343 SSPNKFLGSQYNWSMLPAFGGVLCAKASMLLQNVPPALLVRFLREH--RSEW 392
S + G P G VL A S + VPP + FLR+ R+EW
Sbjct: 531 KSVDD-PGRP------P--GIVLSAATSFWIP-VPPKRVFDFLRDENSRNEW 572
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 491 DDAPLLASGFRVIPLDSKAAMQQDGPAASRTLDLASALEVGS 532
D LL SGF ++P D A G L +A + V S
Sbjct: 647 DYVALLPSGFAILP-DGNANSGAPGGDGGSLLTVAFQILVDS 687
Score = 39 (18.8 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 702 EFAKIMQQGFAYLPGGMCVSSM-GRAVSYEQAVAWKVLDD 740
++ ++ GFA LP G S G VA+++L D
Sbjct: 647 DYVALLPSGFAILPDGNANSGAPGGDGGSLLTVAFQILVD 686
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 8 ENDRLQKQVSHLVYENGYMRQQ 29
+N R Q + H +EN ++R +
Sbjct: 113 QNKRTQMKNHHERHENSHLRAE 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 757 729 0.00086 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 627 (67 KB)
Total size of DFA: 387 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 56.09u 0.12s 56.21t Elapsed: 00:00:02
Total cpu time: 56.09u 0.12s 56.21t Elapsed: 00:00:02
Start: Tue May 21 10:12:48 2013 End: Tue May 21 10:12:50 2013